##gff-version 3 ##sequence-region LTnewLM_00 1 240955 ##sequence-region LTnewLM_1 1 287519 ##sequence-region LTnewLM_10 1 564088 ##sequence-region LTnewLM_11 1 581196 ##sequence-region LTnewLM_12 1 528377 ##sequence-region LTnewLM_13 1 642182 ##sequence-region LTnewLM_14 1 656244 ##sequence-region LTnewLM_15 1 650084 ##sequence-region LTnewLM_16 1 698018 ##sequence-region LTnewLM_17 1 691904 ##sequence-region LTnewLM_18 1 721580 ##sequence-region LTnewLM_19 1 708414 ##sequence-region LTnewLM_2 1 357661 ##sequence-region LTnewLM_20 1 760567 ##sequence-region LTnewLM_21 1 769579 ##sequence-region LTnewLM_22 1 742832 ##sequence-region LTnewLM_23 1 769666 ##sequence-region LTnewLM_24 1 861383 ##sequence-region LTnewLM_25 1 900343 ##sequence-region LTnewLM_26 1 1070514 ##sequence-region LTnewLM_27 1 1114889 ##sequence-region LTnewLM_28 1 1170176 ##sequence-region LTnewLM_29 1 1232166 ##sequence-region LTnewLM_3 1 388914 ##sequence-region LTnewLM_30 1 1384498 ##sequence-region LTnewLM_31 1 1523839 ##sequence-region LTnewLM_32 1 1538781 ##sequence-region LTnewLM_33 1 1515492 ##sequence-region LTnewLM_34 1 1723276 ##sequence-region LTnewLM_35 1 2041183 ##sequence-region LTnewLM_36 1 2729486 ##sequence-region LTnewLM_4 1 466780 ##sequence-region LTnewLM_5 1 483666 ##sequence-region LTnewLM_6 1 519251 ##sequence-region LTnewLM_7 1 595713 ##sequence-region LTnewLM_8 1 502828 ##sequence-region LTnewLM_9 1 567224 LTnewLM_00 . contig 1 8367 . + . Name=LTnewLM_CTG000001 LTnewLM_00 AUGUSTUS gene 4277 4838 0.56 + . ID=LTnewLM_000005000 LTnewLM_00 AUGUSTUS mRNA 4277 4838 0.56 + . ID=LTnewLM_000005000.1;Parent=LTnewLM_000005000 LTnewLM_00 AUGUSTUS CDS 4277 4291 0.97 + 0 ID=LTnewLM_000005000.1:CDS:1;Parent=LTnewLM_000005000.1 LTnewLM_00 AUGUSTUS CDS 4365 4838 0.56 + 0 ID=LTnewLM_000005000.1:CDS:2;Parent=LTnewLM_000005000.1 ### LTnewLM_00 . polypeptide 4277 4838 . + . ID=LTnewLM_000005000.1:pep;Derives_from=LTnewLM_000005000.1;orthologous_to=LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . gap 8368 8467 . . . gap_type=between scaffolds LTnewLM_00 . contig 8468 10322 . + . Name=LTnewLM_CTG000002 LTnewLM_00 . gap 10323 10422 . . . gap_type=between scaffolds LTnewLM_00 . contig 10423 66277 . + . Name=LTnewLM_CTG000003 LTnewLM_00 AUGUSTUS gene 22587 22936 0.41 - . ID=LTnewLM_000005100 LTnewLM_00 AUGUSTUS mRNA 22587 22936 0.41 - . ID=LTnewLM_000005100.1;Parent=LTnewLM_000005100 LTnewLM_00 AUGUSTUS CDS 22587 22689 0.56 - 1 ID=LTnewLM_000005100.1:CDS:1;Parent=LTnewLM_000005100.1 LTnewLM_00 AUGUSTUS CDS 22809 22936 0.47 - 0 ID=LTnewLM_000005100.1:CDS:2;Parent=LTnewLM_000005100.1 ### LTnewLM_00 . polypeptide 22587 22936 . - . ID=LTnewLM_000005100.1:pep;Derives_from=LTnewLM_000005100.1;product=term%3Dhypothetical protein ### LTnewLM_00 AUGUSTUS gene 22972 23457 0.6 - . ID=LTnewLM_000005200 LTnewLM_00 AUGUSTUS mRNA 22972 23457 0.6 - . ID=LTnewLM_000005200.1;Parent=LTnewLM_000005200 LTnewLM_00 AUGUSTUS CDS 22972 23457 0.6 - 0 ID=LTnewLM_000005200.1:CDS:1;Parent=LTnewLM_000005200.1 ### LTnewLM_00 . polypeptide 22972 23457 . - . ID=LTnewLM_000005200.1:pep;Derives_from=LTnewLM_000005200.1;product=term%3Dhypothetical protein ### LTnewLM_00 AUGUSTUS gene 26411 27523 0.68 - . ID=LTnewLM_000005300 LTnewLM_00 AUGUSTUS mRNA 26411 27523 0.68 - . ID=LTnewLM_000005300.1;Parent=LTnewLM_000005300 LTnewLM_00 AUGUSTUS CDS 26411 27523 0.68 - 0 ID=LTnewLM_000005300.1:CDS:1;Parent=LTnewLM_000005300.1 ### LTnewLM_00 . polypeptide 26411 27523 . - . ID=LTnewLM_000005300.1:pep;Derives_from=LTnewLM_000005300.1;orthologous_to=LTnewLM_320044200.1,LTnewLM_320044300.1,LmjF.32.3650_mRNA,LmjF.32.3660_mRNA,LmjF.32.3670_mRNA;ortholog_cluster=OG0000049;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_00 Pfam protein_match 26444 27436 . - . Parent=LTnewLM_000005300.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_00 Pfam protein_match 26912 27436 . - . Parent=LTnewLM_000005300.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_00 . pseudogene 27723 29550 1.53e+03 + . ID=LTnewLM_000005400:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.36.1280:mRNA 2 587;original_prot_length=593 LTnewLM_00 . pseudogenic_transcript 27723 29550 . + . ID=LTnewLM_000005400.1;Parent=LTnewLM_000005400:pseudogene LTnewLM_00 . pseudogenic_exon 27723 27770 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:1;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 27772 27888 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:2;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 27890 27898 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:3;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 27900 27953 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:4;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 27956 28006 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:5;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28008 28037 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:6;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28039 28050 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:7;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28052 28078 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:8;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28080 28118 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:9;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28120 28251 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:10;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28253 28261 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:11;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28263 28298 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:12;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28300 28320 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:13;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28323 28358 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:14;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28361 28435 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:15;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28437 28658 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:16;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28661 28672 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:17;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28678 28737 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:18;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28739 28747 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:19;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28749 28775 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:20;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28778 28792 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:21;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28795 28830 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:22;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28832 28906 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:23;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 28908 29000 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:24;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29002 29091 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:25;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29094 29105 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:26;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29107 29145 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:27;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29147 29155 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:28;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29157 29183 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:29;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29189 29209 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:30;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29211 29225 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:31;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29227 29289 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:32;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29291 29356 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:33;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29358 29363 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:34;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29365 29442 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:35;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29445 29504 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:36;Parent=LTnewLM_000005400.1 LTnewLM_00 . pseudogenic_exon 29506 29550 . + . ID=LTnewLM_000005400.1:pseudogenic_exon:37;Parent=LTnewLM_000005400.1 ### LTnewLM_00 . polypeptide 27723 29550 . + . ID=LTnewLM_000005400.1:pep;Derives_from=LTnewLM_000005400.1;orthologous_to=LTnewLM_340024200.1,LTnewLM_340024500.1;ortholog_cluster=OG0000456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . pseudogene 33319 33897 599 + . ID=LTnewLM_000005500:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.08.0680:mRNA 1 191;original_prot_length=205 LTnewLM_00 . pseudogenic_transcript 33319 33897 . + . ID=LTnewLM_000005500.1;Parent=LTnewLM_000005500:pseudogene LTnewLM_00 . pseudogenic_exon 33319 33435 . + . ID=LTnewLM_000005500.1:pseudogenic_exon:1;Parent=LTnewLM_000005500.1 LTnewLM_00 . pseudogenic_exon 33438 33623 . + . ID=LTnewLM_000005500.1:pseudogenic_exon:2;Parent=LTnewLM_000005500.1 LTnewLM_00 . pseudogenic_exon 33626 33730 . + . ID=LTnewLM_000005500.1:pseudogenic_exon:3;Parent=LTnewLM_000005500.1 LTnewLM_00 . pseudogenic_exon 33732 33794 . + . ID=LTnewLM_000005500.1:pseudogenic_exon:4;Parent=LTnewLM_000005500.1 LTnewLM_00 . pseudogenic_exon 33796 33897 . + . ID=LTnewLM_000005500.1:pseudogenic_exon:5;Parent=LTnewLM_000005500.1 ### LTnewLM_00 . polypeptide 33319 33897 . + . ID=LTnewLM_000005500.1:pep;Derives_from=LTnewLM_000005500.1;orthologous_to=LTnewLM_310010000.1,LTnewLM_310010100.1,LTnewLM_310010300.1,LTnewLM_310010400.1,LTnewLM_310010500.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_00 Pfam protein_match 33361 33825 . + . Parent=LTnewLM_000005500.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_00 . pseudogene 38802 40020 1.77e+03 - . ID=LTnewLM_000005600:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.35.2800:mRNA 1 401;original_prot_length=401 LTnewLM_00 . pseudogenic_transcript 38802 40020 . - . ID=LTnewLM_000005600.1;Parent=LTnewLM_000005600:pseudogene LTnewLM_00 . pseudogenic_exon 38802 38834 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:1;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 38837 38890 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:2;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 38893 39015 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:3;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39020 39067 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:4;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39070 39111 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:5;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39113 39145 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:6;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39147 39161 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:7;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39167 39211 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:8;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39213 39221 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:9;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39223 39336 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:10;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39339 39455 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:11;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39458 39481 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:12;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39483 39557 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:13;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39560 39691 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:14;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39693 39860 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:15;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39863 39943 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:16;Parent=LTnewLM_000005600.1 LTnewLM_00 . pseudogenic_exon 39946 40020 . - . ID=LTnewLM_000005600.1:pseudogenic_exon:17;Parent=LTnewLM_000005600.1 ### LTnewLM_00 . polypeptide 38802 40020 . - . ID=LTnewLM_000005600.1:pep;Derives_from=LTnewLM_000005600.1;orthologous_to=LTnewLM_350034100.1,LmjF.35.2800_mRNA;ortholog_cluster=OG0000470;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 42716 44833 1 - . ID=LTnewLM_000005700 LTnewLM_00 AUGUSTUS mRNA 42716 44833 1 - . ID=LTnewLM_000005700.1;Parent=LTnewLM_000005700 LTnewLM_00 AUGUSTUS CDS 42716 44833 1 - 0 ID=LTnewLM_000005700.1:CDS:1;Parent=LTnewLM_000005700.1 ### LTnewLM_00 . polypeptide 42716 44833 . - . ID=LTnewLM_000005700.1:pep;Derives_from=LTnewLM_000005700.1;orthologous_to=LTnewLM_350034200.1,LmjF.35.2810_mRNA;ortholog_cluster=OG0000299;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_00 Pfam protein_match 44249 44677 . - . Parent=LTnewLM_000005700.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_00 . pseudogene 56683 58298 2.54e+03 - . ID=LTnewLM_000005800:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.36.2030:mRNA 4 541;original_prot_length=563 LTnewLM_00 . pseudogenic_transcript 56683 58298 . - . ID=LTnewLM_000005800.1;Parent=LTnewLM_000005800:pseudogene LTnewLM_00 . pseudogenic_exon 56683 58050 . - . ID=LTnewLM_000005800.1:pseudogenic_exon:1;Parent=LTnewLM_000005800.1 LTnewLM_00 . pseudogenic_exon 58053 58298 . - . ID=LTnewLM_000005800.1:pseudogenic_exon:2;Parent=LTnewLM_000005800.1 ### LTnewLM_00 . polypeptide 56683 58298 . - . ID=LTnewLM_000005800.1:pep;Derives_from=LTnewLM_000005800.1;orthologous_to=LTnewLM_000005900.1,LTnewLM_360027800.1,LTnewLM_360027900.1,LmjF.36.2020_mRNA,LmjF.36.2030_mRNA;ortholog_cluster=OG0000072;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_00 Pfam protein_match 56700 58211 . - . Parent=LTnewLM_000005800.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_00 . gap 66278 66377 . . . gap_type=between scaffolds LTnewLM_00 . contig 66378 81092 . + . Name=LTnewLM_CTG000004 LTnewLM_00 . pseudogene 68965 70564 1.16e+03 + . ID=LTnewLM_000005900:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.32.1850:mRNA 17 542;original_prot_length=595 LTnewLM_00 . pseudogenic_transcript 68965 70564 . + . ID=LTnewLM_000005900.1;Parent=LTnewLM_000005900:pseudogene LTnewLM_00 . pseudogenic_exon 68965 68982 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:1;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 68984 69109 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:2;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69112 69165 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:3;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69168 69509 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:4;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69511 69525 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:5;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69527 69535 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:6;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69537 69620 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:7;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69622 69693 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:8;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69696 69734 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:9;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69736 69744 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:10;Parent=LTnewLM_000005900.1 LTnewLM_00 . pseudogenic_exon 69746 70564 . + . ID=LTnewLM_000005900.1:pseudogenic_exon:11;Parent=LTnewLM_000005900.1 ### LTnewLM_00 . polypeptide 68965 70564 . + . ID=LTnewLM_000005900.1:pep;Derives_from=LTnewLM_000005900.1;orthologous_to=LTnewLM_000005800.1,LTnewLM_360027800.1,LTnewLM_360027900.1,LmjF.36.2020_mRNA,LmjF.36.2030_mRNA;ortholog_cluster=OG0000072;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_00 Pfam protein_match 69427 70545 . + . Parent=LTnewLM_000005900.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_00 . pseudogene 71747 73314 498 - . ID=LTnewLM_000006000:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.31.0340:mRNA 66 464;original_prot_length=468 LTnewLM_00 . pseudogenic_transcript 71747 73314 . - . ID=LTnewLM_000006000.1;Parent=LTnewLM_000006000:pseudogene LTnewLM_00 . pseudogenic_exon 71747 71941 . - . ID=LTnewLM_000006000.1:pseudogenic_exon:1;Parent=LTnewLM_000006000.1 LTnewLM_00 . pseudogenic_exon 71943 71981 . - . ID=LTnewLM_000006000.1:pseudogenic_exon:2;Parent=LTnewLM_000006000.1 LTnewLM_00 . pseudogenic_exon 71983 72315 . - . ID=LTnewLM_000006000.1:pseudogenic_exon:3;Parent=LTnewLM_000006000.1 LTnewLM_00 . pseudogenic_exon 72318 73043 . - . ID=LTnewLM_000006000.1:pseudogenic_exon:4;Parent=LTnewLM_000006000.1 LTnewLM_00 . pseudogenic_exon 73045 73314 . - . ID=LTnewLM_000006000.1:pseudogenic_exon:5;Parent=LTnewLM_000006000.1 ### LTnewLM_00 . polypeptide 71747 73314 . - . ID=LTnewLM_000006000.1:pep;Derives_from=LTnewLM_000006000.1;orthologous_to=LTnewLM_310027000.1,LTnewLM_310027200.1,LTnewLM_310027600.1,LmjF.31.1790_mRNA,LmjF.31.1800_mRNA,LmjF.31.1820_mRNA;ortholog_cluster=OG0000043;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_00 Pfam protein_match 71758 73302 . - . Parent=LTnewLM_000006000.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_00 Pfam protein_match 72775 73296 . - . Parent=LTnewLM_000006000.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_00 . pseudogene 79006 80045 1.67e+03 - . ID=LTnewLM_000006100:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.08.1070:mRNA 1 346;original_prot_length=349 LTnewLM_00 . pseudogenic_transcript 79006 80045 . - . ID=LTnewLM_000006100.1;Parent=LTnewLM_000006100:pseudogene LTnewLM_00 . pseudogenic_exon 79006 79101 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:1;Parent=LTnewLM_000006100.1 LTnewLM_00 . pseudogenic_exon 79103 79153 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:2;Parent=LTnewLM_000006100.1 LTnewLM_00 . pseudogenic_exon 79156 79299 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:3;Parent=LTnewLM_000006100.1 LTnewLM_00 . pseudogenic_exon 79301 79720 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:4;Parent=LTnewLM_000006100.1 LTnewLM_00 . pseudogenic_exon 79723 79962 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:5;Parent=LTnewLM_000006100.1 LTnewLM_00 . pseudogenic_exon 79965 80045 . - . ID=LTnewLM_000006100.1:pseudogenic_exon:6;Parent=LTnewLM_000006100.1 ### LTnewLM_00 . polypeptide 79006 80045 . - . ID=LTnewLM_000006100.1:pep;Derives_from=LTnewLM_000006100.1;orthologous_to=LTnewLM_080014400.1,LTnewLM_080014500.1,LTnewLM_080014600.1,LTnewLM_080014700.1,LTnewLM_080014900.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112;Ontology_term=GO:0008234,GO:0006508 LTnewLM_00 Pfam protein_match 79056 79673 . - . Parent=LTnewLM_000006100.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_00 Pfam protein_match 79767 79934 . - . Parent=LTnewLM_000006100.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_00 . gap 81093 81192 . . . gap_type=between scaffolds LTnewLM_00 . contig 81193 88523 . + . Name=LTnewLM_CTG000005 LTnewLM_00 AUGUSTUS gene 82310 82749 0.51 + . ID=LTnewLM_000006200 LTnewLM_00 AUGUSTUS mRNA 82310 82749 0.51 + . ID=LTnewLM_000006200.1;Parent=LTnewLM_000006200 LTnewLM_00 AUGUSTUS CDS 82310 82413 0.86 + 0 ID=LTnewLM_000006200.1:CDS:1;Parent=LTnewLM_000006200.1 LTnewLM_00 AUGUSTUS CDS 82524 82749 0.59 + 1 ID=LTnewLM_000006200.1:CDS:2;Parent=LTnewLM_000006200.1 ### LTnewLM_00 . polypeptide 82310 82749 . + . ID=LTnewLM_000006200.1:pep;Derives_from=LTnewLM_000006200.1;orthologous_to=LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 84419 84859 0.56 + . ID=LTnewLM_000006300 LTnewLM_00 AUGUSTUS mRNA 84419 84859 0.56 + . ID=LTnewLM_000006300.1;Parent=LTnewLM_000006300 LTnewLM_00 AUGUSTUS CDS 84419 84565 0.56 + 0 ID=LTnewLM_000006300.1:CDS:1;Parent=LTnewLM_000006300.1 LTnewLM_00 AUGUSTUS CDS 84767 84859 0.97 + 0 ID=LTnewLM_000006300.1:CDS:2;Parent=LTnewLM_000006300.1 ### LTnewLM_00 . polypeptide 84419 84859 . + . ID=LTnewLM_000006300.1:pep;Derives_from=LTnewLM_000006300.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 85942 86490 0.84 + . ID=LTnewLM_000006400 LTnewLM_00 AUGUSTUS mRNA 85942 86490 0.84 + . ID=LTnewLM_000006400.1;Parent=LTnewLM_000006400 LTnewLM_00 AUGUSTUS CDS 85942 86062 0.88 + 0 ID=LTnewLM_000006400.1:CDS:1;Parent=LTnewLM_000006400.1 LTnewLM_00 AUGUSTUS CDS 86336 86490 0.84 + 2 ID=LTnewLM_000006400.1:CDS:2;Parent=LTnewLM_000006400.1 ### LTnewLM_00 . polypeptide 85942 86490 . + . ID=LTnewLM_000006400.1:pep;Derives_from=LTnewLM_000006400.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009;Ontology_term=GO:0003924,GO:0005525 LTnewLM_00 Pfam protein_match 85993 86058 . + . Parent=LTnewLM_000006400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_00 Pfam protein_match 86062 86193 . + . Parent=LTnewLM_000006400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_00 AUGUSTUS gene 87052 88143 0.58 + . ID=LTnewLM_000006500 LTnewLM_00 AUGUSTUS mRNA 87052 88143 0.58 + . ID=LTnewLM_000006500.1;Parent=LTnewLM_000006500 LTnewLM_00 AUGUSTUS CDS 87052 87161 1 + 0 ID=LTnewLM_000006500.1:CDS:1;Parent=LTnewLM_000006500.1 LTnewLM_00 AUGUSTUS CDS 87582 88143 0.58 + 1 ID=LTnewLM_000006500.1:CDS:2;Parent=LTnewLM_000006500.1 ### LTnewLM_00 . polypeptide 87052 88143 . + . ID=LTnewLM_000006500.1:pep;Derives_from=LTnewLM_000006500.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . gap 88524 88623 . . . gap_type=between scaffolds LTnewLM_00 . contig 88624 237795 . + . Name=LTnewLM_CTG000006 LTnewLM_00 . pseudogene 89385 90387 1.2e+03 + . ID=LTnewLM_000006600:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;Target=LmjF.34.1410:mRNA 1 332;original_prot_length=336 LTnewLM_00 . pseudogenic_transcript 89385 90387 . + . ID=LTnewLM_000006600.1;Parent=LTnewLM_000006600:pseudogene LTnewLM_00 . pseudogenic_exon 89385 89402 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:1;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89404 89430 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:2;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89432 89554 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:3;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89556 89564 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:4;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89566 89595 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:5;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89598 89642 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:6;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89645 89680 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:7;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89683 89697 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:8;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89700 89729 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:9;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89732 89758 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:10;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89761 89853 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:11;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89856 89906 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:12;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89908 89979 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:13;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 89981 90046 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:14;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90049 90078 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:15;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90080 90127 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:16;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90129 90158 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:17;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90161 90190 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:18;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90192 90290 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:19;Parent=LTnewLM_000006600.1 LTnewLM_00 . pseudogenic_exon 90292 90387 . + . ID=LTnewLM_000006600.1:pseudogenic_exon:20;Parent=LTnewLM_000006600.1 ### LTnewLM_00 . polypeptide 89385 90387 . + . ID=LTnewLM_000006600.1:pep;Derives_from=LTnewLM_000006600.1;orthologous_to=LTnewLM_340022200.1,LTnewLM_340022300.1,LTnewLM_340022400.1,LmjF.34.1400_mRNA,LmjF.34.1410_mRNA;ortholog_cluster=OG0000068;product=term%3DD-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02826;Ontology_term=GO:0051287,GO:0055114 LTnewLM_00 Pfam protein_match 89787 90251 . + . Parent=LTnewLM_000006600.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 ### LTnewLM_00 . pseudogene 90567 93115 4.4e+03 - . ID=LTnewLM_000006700:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.36.0180:mRNA 1 844;original_prot_length=846 LTnewLM_00 . pseudogenic_transcript 90567 93115 . - . ID=LTnewLM_000006700.1;Parent=LTnewLM_000006700:pseudogene LTnewLM_00 . pseudogenic_exon 90567 90686 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:1;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 90688 90972 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:2;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 90975 90995 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:3;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 90997 91218 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:4;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91220 91231 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:5;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91234 91254 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:6;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91256 91387 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:7;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91389 91535 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:8;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91537 91569 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:9;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91571 91681 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:10;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91683 91886 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:11;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 91888 92064 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:12;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 92066 92230 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:13;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 92233 92865 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:14;Parent=LTnewLM_000006700.1 LTnewLM_00 . pseudogenic_exon 92867 93115 . - . ID=LTnewLM_000006700.1:pseudogenic_exon:15;Parent=LTnewLM_000006700.1 ### LTnewLM_00 . polypeptide 90567 93115 . - . ID=LTnewLM_000006700.1:pep;Derives_from=LTnewLM_000006700.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_00 Pfam protein_match 90680 90925 . - . Parent=LTnewLM_000006700.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_00 Pfam protein_match 90956 91276 . - . Parent=LTnewLM_000006700.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_00 Pfam protein_match 91466 91651 . - . Parent=LTnewLM_000006700.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_00 Pfam protein_match 91706 91930 . - . Parent=LTnewLM_000006700.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_00 Pfam protein_match 92093 93064 . - . Parent=LTnewLM_000006700.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_00 . pseudogene 94212 96749 4.7e+03 - . ID=LTnewLM_000006800:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.36.0180:mRNA 1 846;original_prot_length=846 LTnewLM_00 . pseudogenic_transcript 94212 96749 . - . ID=LTnewLM_000006800.1;Parent=LTnewLM_000006800:pseudogene LTnewLM_00 . pseudogenic_exon 94212 94610 . - . ID=LTnewLM_000006800.1:pseudogenic_exon:1;Parent=LTnewLM_000006800.1 LTnewLM_00 . pseudogenic_exon 94612 95415 . - . ID=LTnewLM_000006800.1:pseudogenic_exon:2;Parent=LTnewLM_000006800.1 LTnewLM_00 . pseudogenic_exon 95418 95552 . - . ID=LTnewLM_000006800.1:pseudogenic_exon:3;Parent=LTnewLM_000006800.1 LTnewLM_00 . pseudogenic_exon 95555 96565 . - . ID=LTnewLM_000006800.1:pseudogenic_exon:4;Parent=LTnewLM_000006800.1 LTnewLM_00 . pseudogenic_exon 96567 96749 . - . ID=LTnewLM_000006800.1:pseudogenic_exon:5;Parent=LTnewLM_000006800.1 ### LTnewLM_00 . polypeptide 94212 96749 . - . ID=LTnewLM_000006800.1:pep;Derives_from=LTnewLM_000006800.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_00 Pfam protein_match 94320 94580 . - . Parent=LTnewLM_000006800.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_00 Pfam protein_match 94587 94916 . - . Parent=LTnewLM_000006800.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_00 Pfam protein_match 95106 95291 . - . Parent=LTnewLM_000006800.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_00 Pfam protein_match 95346 95555 . - . Parent=LTnewLM_000006800.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_00 Pfam protein_match 95727 96698 . - . Parent=LTnewLM_000006800.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_00 . pseudogene 97859 99539 1.99e+03 - . ID=LTnewLM_000006900:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.29.1750:mRNA 10 569;original_prot_length=596 LTnewLM_00 . pseudogenic_transcript 97859 99539 . - . ID=LTnewLM_000006900.1;Parent=LTnewLM_000006900:pseudogene LTnewLM_00 . pseudogenic_exon 97859 97885 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:1;Parent=LTnewLM_000006900.1 LTnewLM_00 . pseudogenic_exon 97888 98292 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:2;Parent=LTnewLM_000006900.1 LTnewLM_00 . pseudogenic_exon 98295 98363 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:3;Parent=LTnewLM_000006900.1 LTnewLM_00 . pseudogenic_exon 98365 98775 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:4;Parent=LTnewLM_000006900.1 LTnewLM_00 . pseudogenic_exon 98777 99358 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:5;Parent=LTnewLM_000006900.1 LTnewLM_00 . pseudogenic_exon 99360 99539 . - . ID=LTnewLM_000006900.1:pseudogenic_exon:6;Parent=LTnewLM_000006900.1 ### LTnewLM_00 . polypeptide 97859 99539 . - . ID=LTnewLM_000006900.1:pep;Derives_from=LTnewLM_000006900.1;orthologous_to=LTnewLM_160020700.1,LTnewLM_160020800.1,LTnewLM_160020900.1,LmjF.16.1425_mRNA,LmjF.16.1427_mRNA,LmjF.16.1430_mRNA;ortholog_cluster=OG0000037;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_00 Pfam protein_match 97935 98786 . - . Parent=LTnewLM_000006900.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_00 AUGUSTUS gene 101682 119234 0.46 + . ID=LTnewLM_000007000 LTnewLM_00 AUGUSTUS mRNA 101682 119234 0.46 + . ID=LTnewLM_000007000.1;Parent=LTnewLM_000007000 LTnewLM_00 AUGUSTUS CDS 101682 104454 0.99 + 0 ID=LTnewLM_000007000.1:CDS:1;Parent=LTnewLM_000007000.1 LTnewLM_00 AUGUSTUS CDS 104539 119234 0.46 + 2 ID=LTnewLM_000007000.1:CDS:2;Parent=LTnewLM_000007000.1 ### LTnewLM_00 . polypeptide 101682 119234 . + . ID=LTnewLM_000007000.1:pep;Derives_from=LTnewLM_000007000.1;orthologous_to=LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_00 Pfam protein_match 101718 101987 . + . Parent=LTnewLM_000007000.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_00 AUGUSTUS gene 119296 119904 1 + . ID=LTnewLM_000007100 LTnewLM_00 AUGUSTUS mRNA 119296 119904 1 + . ID=LTnewLM_000007100.1;Parent=LTnewLM_000007100 LTnewLM_00 AUGUSTUS CDS 119296 119904 1 + 0 ID=LTnewLM_000007100.1:CDS:1;Parent=LTnewLM_000007100.1 ### LTnewLM_00 . polypeptide 119296 119904 . + . ID=LTnewLM_000007100.1:pep;Derives_from=LTnewLM_000007100.1;product=term%3DLeucine rich repeat/Leucine Rich repeat/Leucine Rich Repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855|Pfam:PF13516|Pfam:PF00560;Ontology_term=GO:0005515 LTnewLM_00 Pfam protein_match 119620 119739 . + . Parent=LTnewLM_000007100.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_00 Pfam protein_match 119635 119676 . + . Parent=LTnewLM_000007100.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_00 Pfam protein_match 119635 119688 . + . Parent=LTnewLM_000007100.1:pep;Name=PF00560;signature_desc=Leucine Rich Repeat;Ontology_term=GO:0005515 LTnewLM_00 Pfam protein_match 119779 119817 . + . Parent=LTnewLM_000007100.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_00 Pfam protein_match 119779 119835 . + . Parent=LTnewLM_000007100.1:pep;Name=PF00560;signature_desc=Leucine Rich Repeat;Ontology_term=GO:0005515 ### LTnewLM_00 AUGUSTUS gene 125108 125977 0.58 + . ID=LTnewLM_000007200 LTnewLM_00 AUGUSTUS mRNA 125108 125977 0.58 + . ID=LTnewLM_000007200.1;Parent=LTnewLM_000007200 LTnewLM_00 AUGUSTUS CDS 125108 125977 0.58 + 0 ID=LTnewLM_000007200.1:CDS:1;Parent=LTnewLM_000007200.1 ### LTnewLM_00 . polypeptide 125108 125977 . + . ID=LTnewLM_000007200.1:pep;Derives_from=LTnewLM_000007200.1;orthologous_to=LTnewLM_000007600.1,LmjF.35.0520_mRNA;ortholog_cluster=OG0000300;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 129120 130181 0.96 + . ID=LTnewLM_000007300 LTnewLM_00 AUGUSTUS mRNA 129120 130181 0.96 + . ID=LTnewLM_000007300.1;Parent=LTnewLM_000007300 LTnewLM_00 AUGUSTUS CDS 129120 130181 0.96 + 0 ID=LTnewLM_000007300.1:CDS:1;Parent=LTnewLM_000007300.1 ### LTnewLM_00 . polypeptide 129120 130181 . + . ID=LTnewLM_000007300.1:pep;Derives_from=LTnewLM_000007300.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 130330 131788 0.47 + . ID=LTnewLM_000007400 LTnewLM_00 AUGUSTUS mRNA 130330 131788 0.47 + . ID=LTnewLM_000007400.1;Parent=LTnewLM_000007400 LTnewLM_00 AUGUSTUS CDS 130330 131482 0.89 + 0 ID=LTnewLM_000007400.1:CDS:1;Parent=LTnewLM_000007400.1 LTnewLM_00 AUGUSTUS CDS 131571 131788 0.47 + 2 ID=LTnewLM_000007400.1:CDS:2;Parent=LTnewLM_000007400.1 ### LTnewLM_00 . polypeptide 130330 131788 . + . ID=LTnewLM_000007400.1:pep;Derives_from=LTnewLM_000007400.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 131928 132395 0.43 + . ID=LTnewLM_000007500 LTnewLM_00 AUGUSTUS mRNA 131928 132395 0.43 + . ID=LTnewLM_000007500.1;Parent=LTnewLM_000007500 LTnewLM_00 AUGUSTUS CDS 131928 132044 0.45 + 0 ID=LTnewLM_000007500.1:CDS:1;Parent=LTnewLM_000007500.1 LTnewLM_00 AUGUSTUS CDS 132144 132395 0.73 + 0 ID=LTnewLM_000007500.1:CDS:2;Parent=LTnewLM_000007500.1 ### LTnewLM_00 . polypeptide 131928 132395 . + . ID=LTnewLM_000007500.1:pep;Derives_from=LTnewLM_000007500.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . pseudogene 184017 205462 3.23e+04 - . ID=LTnewLM_000007600:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.35.0520:mRNA 1 6973;original_prot_length=7195 LTnewLM_00 . pseudogenic_transcript 184017 205462 . - . ID=LTnewLM_000007600.1;Parent=LTnewLM_000007600:pseudogene LTnewLM_00 . pseudogenic_exon 184017 184238 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:1;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 184241 184567 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:2;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 184570 184593 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:3;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 184596 184787 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:4;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 184789 184926 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:5;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 184929 185510 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:6;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 185513 186007 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:7;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 186009 188798 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:8;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 188801 188977 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:9;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 188980 189339 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:10;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 189342 190643 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:11;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 190646 191002 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:12;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 191005 191226 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:13;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 191229 192665 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:14;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 192668 192886 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:15;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 192888 195095 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:16;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 195098 195319 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:17;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 195322 196128 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:18;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 196131 198974 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:19;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 198976 200973 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:20;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 200990 201079 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:21;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 201082 201186 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:22;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 201189 201368 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:23;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 201496 201615 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:24;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 201617 201652 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:25;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 201654 202259 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:26;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 202261 202665 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:27;Parent=LTnewLM_000007600.1 LTnewLM_00 . pseudogenic_exon 202667 205462 . - . ID=LTnewLM_000007600.1:pseudogenic_exon:28;Parent=LTnewLM_000007600.1 ### LTnewLM_00 . polypeptide 184017 205462 . - . ID=LTnewLM_000007600.1:pep;Derives_from=LTnewLM_000007600.1;orthologous_to=LTnewLM_000007200.1,LmjF.35.0520_mRNA;ortholog_cluster=OG0000300;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . pseudogene 210716 213203 3.62e+03 + . ID=LTnewLM_000007700:pseudogene;has_internal_stop=false;has_frameshift=true;has_stop=true;Target=LmjF.36.2680:mRNA 187 1006;original_prot_length=1006 LTnewLM_00 . pseudogenic_transcript 210716 213203 . + . ID=LTnewLM_000007700.1;Parent=LTnewLM_000007700:pseudogene LTnewLM_00 . pseudogenic_exon 210716 210796 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:1;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210799 210810 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:2;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210812 210835 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:3;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210838 210864 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:4;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210866 210904 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:5;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210906 210983 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:6;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 210985 211092 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:7;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211095 211136 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:8;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211142 211183 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:9;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211186 211188 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:10;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211191 211319 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:11;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211321 211338 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:12;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211341 211427 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:13;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211429 211449 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:14;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211452 211514 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:15;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211516 211530 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:16;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211533 211667 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:17;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211669 211701 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:18;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211703 211726 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:19;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211728 211748 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:20;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 211754 212092 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:21;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212094 212126 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:22;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212129 212224 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:23;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212226 212384 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:24;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212386 212559 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:25;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212561 212884 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:26;Parent=LTnewLM_000007700.1 LTnewLM_00 . pseudogenic_exon 212886 213203 . + . ID=LTnewLM_000007700.1:pseudogenic_exon:27;Parent=LTnewLM_000007700.1 ### LTnewLM_00 . polypeptide 210716 213203 . + . ID=LTnewLM_000007700.1:pep;Derives_from=LTnewLM_000007700.1;orthologous_to=LTnewLM_360036000.1,LmjF.36.2680_mRNA;ortholog_cluster=OG0000480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 213983 215081 0.43 + . ID=LTnewLM_000007800 LTnewLM_00 AUGUSTUS mRNA 213983 215081 0.43 + . ID=LTnewLM_000007800.1;Parent=LTnewLM_000007800 LTnewLM_00 AUGUSTUS CDS 213983 214744 0.44 + 0 ID=LTnewLM_000007800.1:CDS:1;Parent=LTnewLM_000007800.1 LTnewLM_00 AUGUSTUS CDS 214788 215081 0.43 + 0 ID=LTnewLM_000007800.1:CDS:2;Parent=LTnewLM_000007800.1 ### LTnewLM_00 . polypeptide 213983 215081 . + . ID=LTnewLM_000007800.1:pep;Derives_from=LTnewLM_000007800.1;orthologous_to=LTnewLM_360035900.1,LmjF.36.2670_mRNA;ortholog_cluster=OG0000301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 216025 217410 1 + . ID=LTnewLM_000007900 LTnewLM_00 AUGUSTUS mRNA 216025 217410 1 + . ID=LTnewLM_000007900.1;Parent=LTnewLM_000007900 LTnewLM_00 AUGUSTUS CDS 216025 217410 1 + 0 ID=LTnewLM_000007900.1:CDS:1;Parent=LTnewLM_000007900.1 ### LTnewLM_00 . polypeptide 216025 217410 . + . ID=LTnewLM_000007900.1:pep;Derives_from=LTnewLM_000007900.1;orthologous_to=LTnewLM_360035800.1,LmjF.36.2660_mRNA;ortholog_cluster=OG0000302;product=term%3DBiotin-requiring enzyme/e3 binding domain/2-oxoacid dehydrogenases acyltransferase (catalytic domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00364|Pfam:PF02817|Pfam:PF00198;Ontology_term=GO:0016746,GO:0008152 LTnewLM_00 Pfam protein_match 216091 216306 . + . Parent=LTnewLM_000007900.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_00 Pfam protein_match 216460 216564 . + . Parent=LTnewLM_000007900.1:pep;Name=PF02817;signature_desc=e3 binding domain;Ontology_term=GO:0016746,GO:0008152 LTnewLM_00 Pfam protein_match 216706 217404 . + . Parent=LTnewLM_000007900.1:pep;Name=PF00198;signature_desc=2-oxoacid dehydrogenases acyltransferase (catalytic domain);Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_00 AUGUSTUS gene 220642 220944 1 + . ID=LTnewLM_000008000 LTnewLM_00 AUGUSTUS mRNA 220642 220944 1 + . ID=LTnewLM_000008000.1;Parent=LTnewLM_000008000 LTnewLM_00 AUGUSTUS CDS 220642 220944 1 + 0 ID=LTnewLM_000008000.1:CDS:1;Parent=LTnewLM_000008000.1 ### LTnewLM_00 . polypeptide 220642 220944 . + . ID=LTnewLM_000008000.1:pep;Derives_from=LTnewLM_000008000.1;orthologous_to=LTnewLM_360035600.1;ortholog_cluster=OG0000555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 221064 221288 1 + . ID=LTnewLM_000008100 LTnewLM_00 AUGUSTUS mRNA 221064 221288 1 + . ID=LTnewLM_000008100.1;Parent=LTnewLM_000008100 LTnewLM_00 AUGUSTUS CDS 221064 221288 1 + 0 ID=LTnewLM_000008100.1:CDS:1;Parent=LTnewLM_000008100.1 ### LTnewLM_00 . polypeptide 221064 221288 . + . ID=LTnewLM_000008100.1:pep;Derives_from=LTnewLM_000008100.1;orthologous_to=LTnewLM_360035500.1;ortholog_cluster=OG0000556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 222167 223190 0.48 + . ID=LTnewLM_000008200 LTnewLM_00 AUGUSTUS mRNA 222167 223190 0.48 + . ID=LTnewLM_000008200.1;Parent=LTnewLM_000008200 LTnewLM_00 AUGUSTUS CDS 222167 222233 0.5 + 0 ID=LTnewLM_000008200.1:CDS:1;Parent=LTnewLM_000008200.1 LTnewLM_00 AUGUSTUS CDS 222328 223190 0.58 + 2 ID=LTnewLM_000008200.1:CDS:2;Parent=LTnewLM_000008200.1 ### LTnewLM_00 . polypeptide 222167 223190 . + . ID=LTnewLM_000008200.1:pep;Derives_from=LTnewLM_000008200.1;orthologous_to=LTnewLM_360035400.1,LmjF.36.2650_mRNA;ortholog_cluster=OG0000303;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_00 Pfam protein_match 222491 222811 . + . Parent=LTnewLM_000008200.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_00 AUGUSTUS gene 223988 225645 0.59 + . ID=LTnewLM_000008300 LTnewLM_00 AUGUSTUS mRNA 223988 225645 0.59 + . ID=LTnewLM_000008300.1;Parent=LTnewLM_000008300 LTnewLM_00 AUGUSTUS CDS 223988 224964 0.99 + 0 ID=LTnewLM_000008300.1:CDS:1;Parent=LTnewLM_000008300.1 LTnewLM_00 AUGUSTUS CDS 225048 225645 0.59 + 1 ID=LTnewLM_000008300.1:CDS:2;Parent=LTnewLM_000008300.1 ### LTnewLM_00 . polypeptide 223988 225645 . + . ID=LTnewLM_000008300.1:pep;Derives_from=LTnewLM_000008300.1;orthologous_to=LTnewLM_360035300.1,LmjF.36.2640_mRNA;ortholog_cluster=OG0000304;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 AUGUSTUS gene 236274 237136 0.41 + . ID=LTnewLM_000008400 LTnewLM_00 AUGUSTUS mRNA 236274 237136 0.41 + . ID=LTnewLM_000008400.1;Parent=LTnewLM_000008400 LTnewLM_00 AUGUSTUS CDS 236274 236536 0.48 + 0 ID=LTnewLM_000008400.1:CDS:1;Parent=LTnewLM_000008400.1 LTnewLM_00 AUGUSTUS CDS 236806 237136 0.41 + 1 ID=LTnewLM_000008400.1:CDS:2;Parent=LTnewLM_000008400.1 ### LTnewLM_00 . polypeptide 236274 237136 . + . ID=LTnewLM_000008400.1:pep;Derives_from=LTnewLM_000008400.1;orthologous_to=LTnewLM_050010300.1,LTnewLM_050010400.1,LTnewLM_050010500.1,LmjF.05.0500_mRNA,LmjF.05.0510_mRNA;ortholog_cluster=OG0000050;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_00 . gap 237796 237895 . . . gap_type=between scaffolds LTnewLM_00 . contig 237896 240955 . + . Name=LTnewLM_CTG000007 LTnewLM_1 . contig 1 287519 . + . Name=LTnewLM_CTG000008 LTnewLM_1 AUGUSTUS gene 7056 8057 1 - . ID=LTnewLM_010005000 LTnewLM_1 AUGUSTUS mRNA 7056 8057 1 - . ID=LTnewLM_010005000.1;Parent=LTnewLM_010005000 LTnewLM_1 AUGUSTUS CDS 7056 8057 1 - 0 ID=LTnewLM_010005000.1:CDS:1;Parent=LTnewLM_010005000.1 ### LTnewLM_1 . polypeptide 7056 8057 . - . ID=LTnewLM_010005000.1:pep;Derives_from=LTnewLM_010005000.1;orthologous_to=LmjF.01.0010_mRNA;ortholog_cluster=OG0000557;product=term%3DProtein of unknown function (DUF2946)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11162 LTnewLM_1 Pfam protein_match 7806 8054 . - . Parent=LTnewLM_010005000.1:pep;Name=PF11162;signature_desc=Protein of unknown function (DUF2946) ### LTnewLM_1 AUGUSTUS gene 9140 10801 1 - . ID=LTnewLM_010005100 LTnewLM_1 AUGUSTUS mRNA 9140 10801 1 - . ID=LTnewLM_010005100.1;Parent=LTnewLM_010005100 LTnewLM_1 AUGUSTUS CDS 9140 10801 1 - 0 ID=LTnewLM_010005100.1:CDS:1;Parent=LTnewLM_010005100.1 ### LTnewLM_1 . polypeptide 9140 10801 . - . ID=LTnewLM_010005100.1:pep;Derives_from=LTnewLM_010005100.1;orthologous_to=LmjF.01.0020_mRNA;ortholog_cluster=OG0000558;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_1 Pfam protein_match 9272 10363 . - . Parent=LTnewLM_010005100.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_1 AUGUSTUS gene 12393 14414 1 - . ID=LTnewLM_010005200 LTnewLM_1 AUGUSTUS mRNA 12393 14414 1 - . ID=LTnewLM_010005200.1;Parent=LTnewLM_010005200 LTnewLM_1 AUGUSTUS CDS 12393 14414 1 - 0 ID=LTnewLM_010005200.1:CDS:1;Parent=LTnewLM_010005200.1 ### LTnewLM_1 . polypeptide 12393 14414 . - . ID=LTnewLM_010005200.1:pep;Derives_from=LTnewLM_010005200.1;orthologous_to=LmjF.01.0030_mRNA;ortholog_cluster=OG0000559;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_1 Pfam protein_match 13068 14003 . - . Parent=LTnewLM_010005200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_1 Pfam protein_match 13593 14039 . - . Parent=LTnewLM_010005200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_1 . pseudogene 15399 15968 . - . ID=LTnewLM_010005300:pseudogene;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0040_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 15399 15968 . - . ID=LTnewLM_010005300.1;Parent=LTnewLM_010005300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 15399 15968 . - . ID=LTnewLM_010005300.1:pseudogenic_exon:1;Parent=LTnewLM_010005300.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 15399 15968 . - . ID=LTnewLM_010005300.1:pep;Derives_from=LTnewLM_010005300.1;orthologous_to=LmjF.01.0040_mRNA;ortholog_cluster=OG0007413;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 18301 20298 1 - . ID=LTnewLM_010005400 LTnewLM_1 AUGUSTUS mRNA 18301 20298 1 - . ID=LTnewLM_010005400.1;Parent=LTnewLM_010005400 LTnewLM_1 AUGUSTUS CDS 18301 20298 1 - 0 ID=LTnewLM_010005400.1:CDS:1;Parent=LTnewLM_010005400.1 ### LTnewLM_1 . polypeptide 18301 20298 . - . ID=LTnewLM_010005400.1:pep;Derives_from=LTnewLM_010005400.1;orthologous_to=LmjF.01.0050_mRNA;ortholog_cluster=OG0000560;product=term%3DBiotin carboxylase%2C N-terminal domain/Carbamoyl-phosphate synthase L chain%2C ATP binding domain/ATP-grasp domain/D-ala D-ala ligase C-terminus/Biotin carboxylase C-terminal domain/Propionyl-coenzyme A carboxylase BT domain/Biotin-requiring enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00289|Pfam:PF02786|Pfam:PF02222|Pfam:PF07478|Pfam:PF02785|Pfam:PF18140|Pfam:PF00364;Ontology_term=GO:0003824,GO:0008152,GO:0005524,GO:0008716,GO:0016874 LTnewLM_1 Pfam protein_match 18310 18510 . - . Parent=LTnewLM_010005400.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_1 Pfam protein_match 18535 18891 . - . Parent=LTnewLM_010005400.1:pep;Name=PF18140;signature_desc=Propionyl-coenzyme A carboxylase BT domain LTnewLM_1 Pfam protein_match 18964 19281 . - . Parent=LTnewLM_010005400.1:pep;Name=PF02785;signature_desc=Biotin carboxylase C-terminal domain;Ontology_term=GO:0016874 LTnewLM_1 Pfam protein_match 19324 19944 . - . Parent=LTnewLM_010005400.1:pep;Name=PF02786;signature_desc=Carbamoyl-phosphate synthase L chain%2C ATP binding domain;Ontology_term=GO:0005524 LTnewLM_1 Pfam protein_match 19414 19878 . - . Parent=LTnewLM_010005400.1:pep;Name=PF02222;signature_desc=ATP-grasp domain LTnewLM_1 Pfam protein_match 19417 19863 . - . Parent=LTnewLM_010005400.1:pep;Name=PF07478;signature_desc=D-ala D-ala ligase C-terminus;Ontology_term=GO:0008716 LTnewLM_1 Pfam protein_match 19960 20283 . - . Parent=LTnewLM_010005400.1:pep;Name=PF00289;signature_desc=Biotin carboxylase%2C N-terminal domain;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 21414 22163 1 - . ID=LTnewLM_010005500 LTnewLM_1 AUGUSTUS mRNA 21414 22163 1 - . ID=LTnewLM_010005500.1;Parent=LTnewLM_010005500 LTnewLM_1 AUGUSTUS CDS 21414 22163 1 - 0 ID=LTnewLM_010005500.1:CDS:1;Parent=LTnewLM_010005500.1 ### LTnewLM_1 . polypeptide 21414 22163 . - . ID=LTnewLM_010005500.1:pep;Derives_from=LTnewLM_010005500.1;orthologous_to=LmjF.01.0060_mRNA;ortholog_cluster=OG0000561;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 23243 25003 1 - . ID=LTnewLM_010005600 LTnewLM_1 AUGUSTUS mRNA 23243 25003 1 - . ID=LTnewLM_010005600.1;Parent=LTnewLM_010005600 LTnewLM_1 AUGUSTUS CDS 23243 25003 1 - 0 ID=LTnewLM_010005600.1:CDS:1;Parent=LTnewLM_010005600.1 ### LTnewLM_1 . polypeptide 23243 25003 . - . ID=LTnewLM_010005600.1:pep;Derives_from=LTnewLM_010005600.1;orthologous_to=LmjF.01.0070_mRNA;ortholog_cluster=OG0000562;product=term%3DBSD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03909 LTnewLM_1 Pfam protein_match 23864 23986 . - . Parent=LTnewLM_010005600.1:pep;Name=PF03909;signature_desc=BSD domain ### LTnewLM_1 AUGUSTUS gene 25843 26556 1 - . ID=LTnewLM_010005700 LTnewLM_1 AUGUSTUS mRNA 25843 26556 1 - . ID=LTnewLM_010005700.1;Parent=LTnewLM_010005700 LTnewLM_1 AUGUSTUS CDS 25843 26556 1 - 0 ID=LTnewLM_010005700.1:CDS:1;Parent=LTnewLM_010005700.1 ### LTnewLM_1 . polypeptide 25843 26556 . - . ID=LTnewLM_010005700.1:pep;Derives_from=LTnewLM_010005700.1;orthologous_to=LmjF.01.0080_mRNA;ortholog_cluster=OG0000563;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 28039 28857 1 - . ID=LTnewLM_010005800 LTnewLM_1 AUGUSTUS mRNA 28039 28857 1 - . ID=LTnewLM_010005800.1;Parent=LTnewLM_010005800 LTnewLM_1 AUGUSTUS CDS 28039 28857 1 - 0 ID=LTnewLM_010005800.1:CDS:1;Parent=LTnewLM_010005800.1 ### LTnewLM_1 . polypeptide 28039 28857 . - . ID=LTnewLM_010005800.1:pep;Derives_from=LTnewLM_010005800.1;orthologous_to=LmjF.01.0090_mRNA;ortholog_cluster=OG0000564;product=term%3DThymidylate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02223 LTnewLM_1 Pfam protein_match 28126 28650 . - . Parent=LTnewLM_010005800.1:pep;Name=PF02223;signature_desc=Thymidylate kinase ### LTnewLM_1 AUGUSTUS gene 29541 30587 1 - . ID=LTnewLM_010005900 LTnewLM_1 AUGUSTUS mRNA 29541 30587 1 - . ID=LTnewLM_010005900.1;Parent=LTnewLM_010005900 LTnewLM_1 AUGUSTUS CDS 29541 30587 1 - 0 ID=LTnewLM_010005900.1:CDS:1;Parent=LTnewLM_010005900.1 ### LTnewLM_1 . polypeptide 29541 30587 . - . ID=LTnewLM_010005900.1:pep;Derives_from=LTnewLM_010005900.1;orthologous_to=LmjF.01.0100_mRNA;ortholog_cluster=OG0000565;product=term%3DGlycosyl transferase family 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01531;Ontology_term=GO:0005975,GO:0016020,GO:0008107 LTnewLM_1 Pfam protein_match 29553 29717 . - . Parent=LTnewLM_010005900.1:pep;Name=PF01531;signature_desc=Glycosyl transferase family 11;Ontology_term=GO:0008107,GO:0005975,GO:0016020 ### LTnewLM_1 AUGUSTUS gene 31597 32184 1 - . ID=LTnewLM_010006000 LTnewLM_1 AUGUSTUS mRNA 31597 32184 1 - . ID=LTnewLM_010006000.1;Parent=LTnewLM_010006000 LTnewLM_1 AUGUSTUS CDS 31597 32184 1 - 0 ID=LTnewLM_010006000.1:CDS:1;Parent=LTnewLM_010006000.1 ### LTnewLM_1 . polypeptide 31597 32184 . - . ID=LTnewLM_010006000.1:pep;Derives_from=LTnewLM_010006000.1;orthologous_to=LmjF.01.0110_mRNA;ortholog_cluster=OG0000566;product=term%3DGlutaredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462;Ontology_term=GO:0009055,GO:0045454,GO:0015035 LTnewLM_1 Pfam protein_match 31699 31887 . - . Parent=LTnewLM_010006000.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 ### LTnewLM_1 AUGUSTUS gene 33380 35356 1 - . ID=LTnewLM_010006100 LTnewLM_1 AUGUSTUS mRNA 33380 35356 1 - . ID=LTnewLM_010006100.1;Parent=LTnewLM_010006100 LTnewLM_1 AUGUSTUS CDS 33380 35356 1 - 0 ID=LTnewLM_010006100.1:CDS:1;Parent=LTnewLM_010006100.1 ### LTnewLM_1 . polypeptide 33380 35356 . - . ID=LTnewLM_010006100.1:pep;Derives_from=LTnewLM_010006100.1;orthologous_to=LmjF.01.0120_mRNA;ortholog_cluster=OG0000567;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 36636 37832 1 - . ID=LTnewLM_010006200 LTnewLM_1 AUGUSTUS mRNA 36636 37832 1 - . ID=LTnewLM_010006200.1;Parent=LTnewLM_010006200 LTnewLM_1 AUGUSTUS CDS 36636 37832 1 - 0 ID=LTnewLM_010006200.1:CDS:1;Parent=LTnewLM_010006200.1 ### LTnewLM_1 . polypeptide 36636 37832 . - . ID=LTnewLM_010006200.1:pep;Derives_from=LTnewLM_010006200.1;orthologous_to=LmjF.01.0130_mRNA;ortholog_cluster=OG0000568;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 39982 40230 1 - . ID=LTnewLM_010006300 LTnewLM_1 AUGUSTUS mRNA 39982 40230 1 - . ID=LTnewLM_010006300.1;Parent=LTnewLM_010006300 LTnewLM_1 AUGUSTUS CDS 39982 40230 1 - 0 ID=LTnewLM_010006300.1:CDS:1;Parent=LTnewLM_010006300.1 ### LTnewLM_1 . polypeptide 39982 40230 . - . ID=LTnewLM_010006300.1:pep;Derives_from=LTnewLM_010006300.1;orthologous_to=LmjF.01.0140_mRNA;ortholog_cluster=OG0000569;product=term%3DN-terminal of Par3 and HAL proteins%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12053 LTnewLM_1 Pfam protein_match 40003 40230 . - . Parent=LTnewLM_010006300.1:pep;Name=PF12053;signature_desc=N-terminal of Par3 and HAL proteins ### LTnewLM_1 AUGUSTUS gene 40822 41172 1 - . ID=LTnewLM_010006400 LTnewLM_1 AUGUSTUS mRNA 40822 41172 1 - . ID=LTnewLM_010006400.1;Parent=LTnewLM_010006400 LTnewLM_1 AUGUSTUS CDS 40822 41172 1 - 0 ID=LTnewLM_010006400.1:CDS:1;Parent=LTnewLM_010006400.1 ### LTnewLM_1 . polypeptide 40822 41172 . - . ID=LTnewLM_010006400.1:pep;Derives_from=LTnewLM_010006400.1;orthologous_to=LmjF.01.0150_mRNA;ortholog_cluster=OG0000570;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 42046 42288 1 - . ID=LTnewLM_010006500 LTnewLM_1 AUGUSTUS mRNA 42046 42288 1 - . ID=LTnewLM_010006500.1;Parent=LTnewLM_010006500 LTnewLM_1 AUGUSTUS CDS 42046 42288 1 - 0 ID=LTnewLM_010006500.1:CDS:1;Parent=LTnewLM_010006500.1 ### LTnewLM_1 . polypeptide 42046 42288 . - . ID=LTnewLM_010006500.1:pep;Derives_from=LTnewLM_010006500.1;orthologous_to=LmjF.01.0160_mRNA;ortholog_cluster=OG0000571;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_1 Pfam protein_match 42091 42276 . - . Parent=LTnewLM_010006500.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_1 AUGUSTUS gene 44338 45711 1 - . ID=LTnewLM_010006600 LTnewLM_1 AUGUSTUS mRNA 44338 45711 1 - . ID=LTnewLM_010006600.1;Parent=LTnewLM_010006600 LTnewLM_1 AUGUSTUS CDS 44338 45711 1 - 0 ID=LTnewLM_010006600.1:CDS:1;Parent=LTnewLM_010006600.1 ### LTnewLM_1 . polypeptide 44338 45711 . - . ID=LTnewLM_010006600.1:pep;Derives_from=LTnewLM_010006600.1;orthologous_to=LmjF.01.0170_mRNA;ortholog_cluster=OG0000572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 47132 49444 1 - . ID=LTnewLM_010006700 LTnewLM_1 AUGUSTUS mRNA 47132 49444 1 - . ID=LTnewLM_010006700.1;Parent=LTnewLM_010006700 LTnewLM_1 AUGUSTUS CDS 47132 49444 1 - 0 ID=LTnewLM_010006700.1:CDS:1;Parent=LTnewLM_010006700.1 ### LTnewLM_1 . polypeptide 47132 49444 . - . ID=LTnewLM_010006700.1:pep;Derives_from=LTnewLM_010006700.1;orthologous_to=LmjF.01.0180_mRNA;ortholog_cluster=OG0000573;product=term%3DVoltage gated chloride channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00654;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020 LTnewLM_1 Pfam protein_match 47813 48937 . - . Parent=LTnewLM_010006700.1:pep;Name=PF00654;signature_desc=Voltage gated chloride channel;Ontology_term=GO:0005247,GO:0006821,GO:0055085,GO:0016020 ### LTnewLM_1 AUGUSTUS gene 50894 51487 1 - . ID=LTnewLM_010006800 LTnewLM_1 AUGUSTUS mRNA 50894 51487 1 - . ID=LTnewLM_010006800.1;Parent=LTnewLM_010006800 LTnewLM_1 AUGUSTUS CDS 50894 51487 1 - 0 ID=LTnewLM_010006800.1:CDS:1;Parent=LTnewLM_010006800.1 ### LTnewLM_1 . polypeptide 50894 51487 . - . ID=LTnewLM_010006800.1:pep;Derives_from=LTnewLM_010006800.1;orthologous_to=LmjF.01.0190_mRNA;ortholog_cluster=OG0000574;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 52185 53096 1 - . ID=LTnewLM_010006900 LTnewLM_1 AUGUSTUS mRNA 52185 53096 1 - . ID=LTnewLM_010006900.1;Parent=LTnewLM_010006900 LTnewLM_1 AUGUSTUS CDS 52185 53096 1 - 0 ID=LTnewLM_010006900.1:CDS:1;Parent=LTnewLM_010006900.1 ### LTnewLM_1 . polypeptide 52185 53096 . - . ID=LTnewLM_010006900.1:pep;Derives_from=LTnewLM_010006900.1;orthologous_to=LmjF.01.0200_mRNA;ortholog_cluster=OG0000575;product=term%3DLow molecular weight phosphotyrosine protein phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01451 LTnewLM_1 Pfam protein_match 52719 52967 . - . Parent=LTnewLM_010006900.1:pep;Name=PF01451;signature_desc=Low molecular weight phosphotyrosine protein phosphatase ### LTnewLM_1 AUGUSTUS gene 53963 56656 1 - . ID=LTnewLM_010007000 LTnewLM_1 AUGUSTUS mRNA 53963 56656 1 - . ID=LTnewLM_010007000.1;Parent=LTnewLM_010007000 LTnewLM_1 AUGUSTUS CDS 53963 56656 1 - 0 ID=LTnewLM_010007000.1:CDS:1;Parent=LTnewLM_010007000.1 ### LTnewLM_1 . polypeptide 53963 56656 . - . ID=LTnewLM_010007000.1:pep;Derives_from=LTnewLM_010007000.1;orthologous_to=LmjF.01.0210_mRNA;ortholog_cluster=OG0000576;product=term%3DCUE domain/Domain of unknown function (DUF1771)/Smr domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02845|Pfam:PF08590|Pfam:PF01713;Ontology_term=GO:0005515 LTnewLM_1 Pfam protein_match 54023 54223 . - . Parent=LTnewLM_010007000.1:pep;Name=PF01713;signature_desc=Smr domain LTnewLM_1 Pfam protein_match 54251 54433 . - . Parent=LTnewLM_010007000.1:pep;Name=PF08590;signature_desc=Domain of unknown function (DUF1771) LTnewLM_1 Pfam protein_match 54851 54967 . - . Parent=LTnewLM_010007000.1:pep;Name=PF02845;signature_desc=CUE domain;Ontology_term=GO:0005515 ### LTnewLM_1 AUGUSTUS gene 60423 61427 1 - . ID=LTnewLM_010007100 LTnewLM_1 AUGUSTUS mRNA 60423 61427 1 - . ID=LTnewLM_010007100.1;Parent=LTnewLM_010007100 LTnewLM_1 AUGUSTUS CDS 60423 61427 1 - 0 ID=LTnewLM_010007100.1:CDS:1;Parent=LTnewLM_010007100.1 ### LTnewLM_1 . polypeptide 60423 61427 . - . ID=LTnewLM_010007100.1:pep;Derives_from=LTnewLM_010007100.1;orthologous_to=LmjF.01.0220_mRNA;ortholog_cluster=OG0000577;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_1 Pfam protein_match 60444 60965 . - . Parent=LTnewLM_010007100.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_1 AUGUSTUS gene 62590 63015 0.8 - . ID=LTnewLM_010007200 LTnewLM_1 AUGUSTUS mRNA 62590 63015 0.8 - . ID=LTnewLM_010007200.1;Parent=LTnewLM_010007200 LTnewLM_1 AUGUSTUS CDS 62590 63015 0.8 - 0 ID=LTnewLM_010007200.1:CDS:1;Parent=LTnewLM_010007200.1 ### LTnewLM_1 . polypeptide 62590 63015 . - . ID=LTnewLM_010007200.1:pep;Derives_from=LTnewLM_010007200.1;orthologous_to=LTnewLM_050009500.1,LTnewLM_170021200.1;ortholog_cluster=OG0000305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 64607 65023 1 - . ID=LTnewLM_010007300 LTnewLM_1 AUGUSTUS mRNA 64607 65023 1 - . ID=LTnewLM_010007300.1;Parent=LTnewLM_010007300 LTnewLM_1 AUGUSTUS CDS 64607 65023 1 - 0 ID=LTnewLM_010007300.1:CDS:1;Parent=LTnewLM_010007300.1 ### LTnewLM_1 . polypeptide 64607 65023 . - . ID=LTnewLM_010007300.1:pep;Derives_from=LTnewLM_010007300.1;orthologous_to=LmjF.01.0230_mRNA;ortholog_cluster=OG0000578;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 65786 68554 1 - . ID=LTnewLM_010007400 LTnewLM_1 AUGUSTUS mRNA 65786 68554 1 - . ID=LTnewLM_010007400.1;Parent=LTnewLM_010007400 LTnewLM_1 AUGUSTUS CDS 65786 68554 1 - 0 ID=LTnewLM_010007400.1:CDS:1;Parent=LTnewLM_010007400.1 ### LTnewLM_1 . polypeptide 65786 68554 . - . ID=LTnewLM_010007400.1:pep;Derives_from=LTnewLM_010007400.1;orthologous_to=LmjF.01.0240_mRNA;ortholog_cluster=OG0000579;product=term%3DSNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0003677 LTnewLM_1 Pfam protein_match 66782 67102 . - . Parent=LTnewLM_010007400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_1 Pfam protein_match 67211 68188 . - . Parent=LTnewLM_010007400.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 ### LTnewLM_1 AUGUSTUS gene 69358 71844 1 - . ID=LTnewLM_010007500 LTnewLM_1 AUGUSTUS mRNA 69358 71844 1 - . ID=LTnewLM_010007500.1;Parent=LTnewLM_010007500 LTnewLM_1 AUGUSTUS CDS 69358 71844 1 - 0 ID=LTnewLM_010007500.1:CDS:1;Parent=LTnewLM_010007500.1 ### LTnewLM_1 . polypeptide 69358 71844 . - . ID=LTnewLM_010007500.1:pep;Derives_from=LTnewLM_010007500.1;orthologous_to=LmjF.01.0250_mRNA;ortholog_cluster=OG0000580;product=term%3DRight handed beta helix region/Periplasmic copper-binding protein (NosD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13229|Pfam:PF05048 LTnewLM_1 Pfam protein_match 69391 69795 . - . Parent=LTnewLM_010007500.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_1 Pfam protein_match 69430 69729 . - . Parent=LTnewLM_010007500.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) ### LTnewLM_1 AUGUSTUS gene 73186 74031 1 - . ID=LTnewLM_010007600 LTnewLM_1 AUGUSTUS mRNA 73186 74031 1 - . ID=LTnewLM_010007600.1;Parent=LTnewLM_010007600 LTnewLM_1 AUGUSTUS CDS 73186 74031 1 - 0 ID=LTnewLM_010007600.1:CDS:1;Parent=LTnewLM_010007600.1 ### LTnewLM_1 . polypeptide 73186 74031 . - . ID=LTnewLM_010007600.1:pep;Derives_from=LTnewLM_010007600.1;orthologous_to=LmjF.01.0260_mRNA;ortholog_cluster=OG0000581;product=term%3DCalmodulin-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13864 LTnewLM_1 Pfam protein_match 73219 73509 . - . Parent=LTnewLM_010007600.1:pep;Name=PF13864;signature_desc=Calmodulin-binding ### LTnewLM_1 AUGUSTUS gene 75232 75555 1 - . ID=LTnewLM_010007700 LTnewLM_1 AUGUSTUS mRNA 75232 75555 1 - . ID=LTnewLM_010007700.1;Parent=LTnewLM_010007700 LTnewLM_1 AUGUSTUS CDS 75232 75555 1 - 0 ID=LTnewLM_010007700.1:CDS:1;Parent=LTnewLM_010007700.1 ### LTnewLM_1 . polypeptide 75232 75555 . - . ID=LTnewLM_010007700.1:pep;Derives_from=LTnewLM_010007700.1;orthologous_to=LmjF.01.0270_mRNA;ortholog_cluster=OG0000582;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_1 Pfam protein_match 75256 75525 . - . Parent=LTnewLM_010007700.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_1 AUGUSTUS gene 77062 78303 1 - . ID=LTnewLM_010007800 LTnewLM_1 AUGUSTUS mRNA 77062 78303 1 - . ID=LTnewLM_010007800.1;Parent=LTnewLM_010007800 LTnewLM_1 AUGUSTUS CDS 77062 78303 1 - 0 ID=LTnewLM_010007800.1:CDS:1;Parent=LTnewLM_010007800.1 ### LTnewLM_1 . polypeptide 77062 78303 . - . ID=LTnewLM_010007800.1:pep;Derives_from=LTnewLM_010007800.1;orthologous_to=LmjF.01.0280_mRNA;ortholog_cluster=OG0000583;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_1 Pfam protein_match 77320 77787 . - . Parent=LTnewLM_010007800.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_1 AUGUSTUS gene 79531 80049 1 - . ID=LTnewLM_010007900 LTnewLM_1 AUGUSTUS mRNA 79531 80049 1 - . ID=LTnewLM_010007900.1;Parent=LTnewLM_010007900 LTnewLM_1 AUGUSTUS CDS 79531 80049 1 - 0 ID=LTnewLM_010007900.1:CDS:1;Parent=LTnewLM_010007900.1 ### LTnewLM_1 . polypeptide 79531 80049 . - . ID=LTnewLM_010007900.1:pep;Derives_from=LTnewLM_010007900.1;orthologous_to=LmjF.01.0290_mRNA;ortholog_cluster=OG0000584;product=term%3DCytochrome c oxidase biogenesis protein Cmc1 like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08583 LTnewLM_1 Pfam protein_match 79753 79911 . - . Parent=LTnewLM_010007900.1:pep;Name=PF08583;signature_desc=Cytochrome c oxidase biogenesis protein Cmc1 like ### LTnewLM_1 Liftoff gene 80958 81137 . - . ID=LTnewLM_010008000;coverage=1.0;sequence_ID=0.955;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.01.0300_0 LTnewLM_1 Liftoff mRNA 80958 81137 . - . ID=LTnewLM_010008000.1;Parent=LTnewLM_010008000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_1 Liftoff CDS 80958 81137 . - 0 ID=LTnewLM_010008000.1:CDS:1;Parent=LTnewLM_010008000.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 80958 81137 . - . ID=LTnewLM_010008000.1:pep;Derives_from=LTnewLM_010008000.1;orthologous_to=LmjF.01.0300_mRNA;ortholog_cluster=OG0000585;product=term%3D4F5 protein related disordered region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04419 LTnewLM_1 Pfam protein_match 81033 81137 . - . Parent=LTnewLM_010008000.1:pep;Name=PF04419;signature_desc=4F5 protein related disordered region ### LTnewLM_1 . pseudogene 81682 82849 . - . ID=LTnewLM_010008100:pseudogene;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0310_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 81682 82849 . - . ID=LTnewLM_010008100.1;Parent=LTnewLM_010008100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 81682 82849 . - . ID=LTnewLM_010008100.1:pseudogenic_exon:1;Parent=LTnewLM_010008100.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 81682 82849 . - . ID=LTnewLM_010008100.1:pep;Derives_from=LTnewLM_010008100.1;orthologous_to=LmjF.01.0310_mRNA;ortholog_cluster=OG0007414;product=term%3DDHH family/DHHA2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01368|Pfam:PF02833;Ontology_term=GO:0016462,GO:0005737 LTnewLM_1 Pfam protein_match 81722 82177 . - . Parent=LTnewLM_010008100.1:pep;Name=PF02833;signature_desc=DHHA2 domain;Ontology_term=GO:0016462,GO:0005737 LTnewLM_1 Pfam protein_match 82337 82777 . - . Parent=LTnewLM_010008100.1:pep;Name=PF01368;signature_desc=DHH family ### LTnewLM_1 AUGUSTUS gene 83209 83640 1 - . ID=LTnewLM_010008200 LTnewLM_1 AUGUSTUS mRNA 83209 83640 1 - . ID=LTnewLM_010008200.1;Parent=LTnewLM_010008200 LTnewLM_1 AUGUSTUS CDS 83209 83640 1 - 0 ID=LTnewLM_010008200.1:CDS:1;Parent=LTnewLM_010008200.1 ### LTnewLM_1 . polypeptide 83209 83640 . - . ID=LTnewLM_010008200.1:pep;Derives_from=LTnewLM_010008200.1;orthologous_to=LmjF.01.0315_mRNA;ortholog_cluster=OG0000586;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 84516 85535 0.99 + . ID=LTnewLM_010008300 LTnewLM_1 AUGUSTUS mRNA 84516 85535 0.99 + . ID=LTnewLM_010008300.1;Parent=LTnewLM_010008300 LTnewLM_1 AUGUSTUS CDS 84516 85535 0.99 + 0 ID=LTnewLM_010008300.1:CDS:1;Parent=LTnewLM_010008300.1 ### LTnewLM_1 . polypeptide 84516 85535 . + . ID=LTnewLM_010008300.1:pep;Derives_from=LTnewLM_010008300.1;orthologous_to=LmjF.01.0320_mRNA;ortholog_cluster=OG0000587;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_1 Pfam protein_match 84834 84935 . + . Parent=LTnewLM_010008300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_1 Liftoff gene 85957 86647 . + . ID=LTnewLM_010008400;coverage=0.996;sequence_ID=0.950;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.01.0330_0 LTnewLM_1 Liftoff mRNA 85957 86647 . + . ID=LTnewLM_010008400.1;Parent=LTnewLM_010008400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_1 Liftoff five_prime_UTR 85957 86014 . + . ID=LTnewLM_010008400:five_prime_UTR;Parent=LTnewLM_010008400.1;extra_copy_number=0 LTnewLM_1 Liftoff CDS 86015 86647 . + 0 ID=LTnewLM_010008400.1:CDS:1;Parent=LTnewLM_010008400.1;extra_copy_number=0 LTnewLM_1 Liftoff mRNA 86063 86647 . + . ID=LTnewLM_010008400.2;Parent=LTnewLM_010008400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_1 Liftoff five_prime_UTR 86063 86446 . + . ID=LTnewLM_010008400:five_prime_UTR.1;Parent=LTnewLM_010008400.2;extra_copy_number=0 LTnewLM_1 Liftoff CDS 86447 86647 . + 0 ID=LTnewLM_010008400.2:CDS:1;Parent=LTnewLM_010008400.2;extra_copy_number=0 ### LTnewLM_1 . polypeptide 86015 86647 . + . ID=LTnewLM_010008400.1:pep;Derives_from=LTnewLM_010008400.1;orthologous_to=LmjF.01.0330.2_mRNA;ortholog_cluster=OG0000588;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 . polypeptide 86447 86647 . + . ID=LTnewLM_010008400.2:pep;Derives_from=LTnewLM_010008400.2;orthologous_to=LmjF.01.0330.1_mRNA;ortholog_cluster=OG0000589;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 87228 87521 1 + . ID=LTnewLM_010008500 LTnewLM_1 AUGUSTUS mRNA 87228 87521 1 + . ID=LTnewLM_010008500.1;Parent=LTnewLM_010008500 LTnewLM_1 AUGUSTUS CDS 87228 87521 1 + 0 ID=LTnewLM_010008500.1:CDS:1;Parent=LTnewLM_010008500.1 ### LTnewLM_1 . polypeptide 87228 87521 . + . ID=LTnewLM_010008500.1:pep;Derives_from=LTnewLM_010008500.1;orthologous_to=LmjF.01.0335_mRNA;ortholog_cluster=OG0000590;product=term%3DMitochondrial pyruvate carriers%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03650;Ontology_term=GO:0006850,GO:0005743 LTnewLM_1 Pfam protein_match 87267 87488 . + . Parent=LTnewLM_010008500.1:pep;Name=PF03650;signature_desc=Mitochondrial pyruvate carriers;Ontology_term=GO:0006850,GO:0005743 ### LTnewLM_1 AUGUSTUS gene 88641 89417 1 + . ID=LTnewLM_010008600 LTnewLM_1 AUGUSTUS mRNA 88641 89417 1 + . ID=LTnewLM_010008600.1;Parent=LTnewLM_010008600 LTnewLM_1 AUGUSTUS CDS 88641 89417 1 + 0 ID=LTnewLM_010008600.1:CDS:1;Parent=LTnewLM_010008600.1 ### LTnewLM_1 . polypeptide 88641 89417 . + . ID=LTnewLM_010008600.1:pep;Derives_from=LTnewLM_010008600.1;orthologous_to=LmjF.01.0340_mRNA;ortholog_cluster=OG0000591;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 91109 93352 1 + . ID=LTnewLM_010008700 LTnewLM_1 AUGUSTUS mRNA 91109 93352 1 + . ID=LTnewLM_010008700.1;Parent=LTnewLM_010008700 LTnewLM_1 AUGUSTUS CDS 91109 93352 1 + 0 ID=LTnewLM_010008700.1:CDS:1;Parent=LTnewLM_010008700.1 ### LTnewLM_1 . polypeptide 91109 93352 . + . ID=LTnewLM_010008700.1:pep;Derives_from=LTnewLM_010008700.1;orthologous_to=LmjF.01.0350_mRNA;ortholog_cluster=OG0000592;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 94189 94758 1 + . ID=LTnewLM_010008800 LTnewLM_1 AUGUSTUS mRNA 94189 94758 1 + . ID=LTnewLM_010008800.1;Parent=LTnewLM_010008800 LTnewLM_1 AUGUSTUS CDS 94189 94758 1 + 0 ID=LTnewLM_010008800.1:CDS:1;Parent=LTnewLM_010008800.1 ### LTnewLM_1 . polypeptide 94189 94758 . + . ID=LTnewLM_010008800.1:pep;Derives_from=LTnewLM_010008800.1;orthologous_to=LmjF.01.0360_mRNA;ortholog_cluster=OG0000593;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 95379 95945 1 + . ID=LTnewLM_010008900 LTnewLM_1 AUGUSTUS mRNA 95379 95945 1 + . ID=LTnewLM_010008900.1;Parent=LTnewLM_010008900 LTnewLM_1 AUGUSTUS CDS 95379 95945 1 + 0 ID=LTnewLM_010008900.1:CDS:1;Parent=LTnewLM_010008900.1 ### LTnewLM_1 . polypeptide 95379 95945 . + . ID=LTnewLM_010008900.1:pep;Derives_from=LTnewLM_010008900.1;orthologous_to=LmjF.01.0370_mRNA;ortholog_cluster=OG0000594;product=term%3DSRP-independent targeting protein 2/TMEM208%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05620 LTnewLM_1 Pfam protein_match 95379 95909 . + . Parent=LTnewLM_010008900.1:pep;Name=PF05620;signature_desc=SRP-independent targeting protein 2/TMEM208 ### LTnewLM_1 AUGUSTUS gene 96760 99210 1 + . ID=LTnewLM_010009000 LTnewLM_1 AUGUSTUS mRNA 96760 99210 1 + . ID=LTnewLM_010009000.1;Parent=LTnewLM_010009000 LTnewLM_1 AUGUSTUS CDS 96760 99210 1 + 0 ID=LTnewLM_010009000.1:CDS:1;Parent=LTnewLM_010009000.1 ### LTnewLM_1 . polypeptide 96760 99210 . + . ID=LTnewLM_010009000.1:pep;Derives_from=LTnewLM_010009000.1;orthologous_to=LmjF.01.0380_mRNA;ortholog_cluster=OG0000595;product=term%3DDyggve-Melchior-Clausen syndrome protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09742 LTnewLM_1 Pfam protein_match 96778 99123 . + . Parent=LTnewLM_010009000.1:pep;Name=PF09742;signature_desc=Dyggve-Melchior-Clausen syndrome protein ### LTnewLM_1 AUGUSTUS gene 100092 102554 1 + . ID=LTnewLM_010009100 LTnewLM_1 AUGUSTUS mRNA 100092 102554 1 + . ID=LTnewLM_010009100.1;Parent=LTnewLM_010009100 LTnewLM_1 AUGUSTUS CDS 100092 102554 1 + 0 ID=LTnewLM_010009100.1:CDS:1;Parent=LTnewLM_010009100.1 ### LTnewLM_1 . polypeptide 100092 102554 . + . ID=LTnewLM_010009100.1:pep;Derives_from=LTnewLM_010009100.1;orthologous_to=LmjF.01.0390_mRNA;ortholog_cluster=OG0000596;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 103422 105101 1 + . ID=LTnewLM_010009200 LTnewLM_1 AUGUSTUS mRNA 103422 105101 1 + . ID=LTnewLM_010009200.1;Parent=LTnewLM_010009200 LTnewLM_1 AUGUSTUS CDS 103422 105101 1 + 0 ID=LTnewLM_010009200.1:CDS:1;Parent=LTnewLM_010009200.1 ### LTnewLM_1 . polypeptide 103422 105101 . + . ID=LTnewLM_010009200.1:pep;Derives_from=LTnewLM_010009200.1;orthologous_to=LmjF.01.0400_mRNA;ortholog_cluster=OG0000597;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 105644 106246 1 + . ID=LTnewLM_010009300 LTnewLM_1 AUGUSTUS mRNA 105644 106246 1 + . ID=LTnewLM_010009300.1;Parent=LTnewLM_010009300 LTnewLM_1 AUGUSTUS CDS 105644 106246 1 + 0 ID=LTnewLM_010009300.1:CDS:1;Parent=LTnewLM_010009300.1 ### LTnewLM_1 . polypeptide 105644 106246 . + . ID=LTnewLM_010009300.1:pep;Derives_from=LTnewLM_010009300.1;orthologous_to=LTnewLM_010009400.1,LmjF.01.0410_mRNA,LmjF.01.0420_mRNA;ortholog_cluster=OG0000103;product=term%3DRibosomal protein S7e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01251;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_1 Pfam protein_match 105665 106204 . + . Parent=LTnewLM_010009300.1:pep;Name=PF01251;signature_desc=Ribosomal protein S7e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_1 AUGUSTUS gene 107415 108017 1 + . ID=LTnewLM_010009400 LTnewLM_1 AUGUSTUS mRNA 107415 108017 1 + . ID=LTnewLM_010009400.1;Parent=LTnewLM_010009400 LTnewLM_1 AUGUSTUS CDS 107415 108017 1 + 0 ID=LTnewLM_010009400.1:CDS:1;Parent=LTnewLM_010009400.1 ### LTnewLM_1 . polypeptide 107415 108017 . + . ID=LTnewLM_010009400.1:pep;Derives_from=LTnewLM_010009400.1;orthologous_to=LTnewLM_010009300.1,LmjF.01.0410_mRNA,LmjF.01.0420_mRNA;ortholog_cluster=OG0000103;product=term%3DRibosomal protein S7e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01251;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_1 Pfam protein_match 107436 107975 . + . Parent=LTnewLM_010009400.1:pep;Name=PF01251;signature_desc=Ribosomal protein S7e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_1 AUGUSTUS gene 108893 111133 1 + . ID=LTnewLM_010009500 LTnewLM_1 AUGUSTUS mRNA 108893 111133 1 + . ID=LTnewLM_010009500.1;Parent=LTnewLM_010009500 LTnewLM_1 AUGUSTUS CDS 108893 111133 1 + 0 ID=LTnewLM_010009500.1:CDS:1;Parent=LTnewLM_010009500.1 ### LTnewLM_1 . polypeptide 108893 111133 . + . ID=LTnewLM_010009500.1:pep;Derives_from=LTnewLM_010009500.1;orthologous_to=LmjF.01.0430_mRNA;ortholog_cluster=OG0000598;product=term%3DRing finger domain/Zn-finger in ubiquitin-hydrolases and other protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF02148;Ontology_term=GO:0008270,GO:0005515 LTnewLM_1 Pfam protein_match 110027 110146 . + . Parent=LTnewLM_010009500.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_1 Pfam protein_match 110183 110356 . + . Parent=LTnewLM_010009500.1:pep;Name=PF02148;signature_desc=Zn-finger in ubiquitin-hydrolases and other protein;Ontology_term=GO:0008270 ### LTnewLM_1 . pseudogene 112483 114251 . + . ID=LTnewLM_010009600:pseudogene;coverage=0.998;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0440_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 112483 114251 . + . ID=LTnewLM_010009600.1;Parent=LTnewLM_010009600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 112483 114251 . + . ID=LTnewLM_010009600.1:pseudogenic_exon:1;Parent=LTnewLM_010009600.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 112483 114251 . + . ID=LTnewLM_010009600.1:pep;Derives_from=LTnewLM_010009600.1;orthologous_to=LmjF.01.0440_mRNA;ortholog_cluster=OG0007415;product=term%3DSugar-tranasporters%2C 12 TM%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05631;Ontology_term=GO:0015689,GO:0015098,GO:0016021 LTnewLM_1 Pfam protein_match 113527 113739 . + . Parent=LTnewLM_010009600.1:pep;Name=PF05631;signature_desc=Sugar-tranasporters%2C 12 TM;Ontology_term=GO:0015098,GO:0015689,GO:0016021 ### LTnewLM_1 AUGUSTUS gene 117108 117764 1 + . ID=LTnewLM_010009700 LTnewLM_1 AUGUSTUS mRNA 117108 117764 1 + . ID=LTnewLM_010009700.1;Parent=LTnewLM_010009700 LTnewLM_1 AUGUSTUS CDS 117108 117764 1 + 0 ID=LTnewLM_010009700.1:CDS:1;Parent=LTnewLM_010009700.1 ### LTnewLM_1 . polypeptide 117108 117764 . + . ID=LTnewLM_010009700.1:pep;Derives_from=LTnewLM_010009700.1;orthologous_to=LmjF.01.0450_mRNA;ortholog_cluster=OG0000599;product=term%3DIsochorismatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00857;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 117186 117725 . + . Parent=LTnewLM_010009700.1:pep;Name=PF00857;signature_desc=Isochorismatase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 119871 124468 0.77 + . ID=LTnewLM_010009800 LTnewLM_1 AUGUSTUS mRNA 119871 124468 0.77 + . ID=LTnewLM_010009800.1;Parent=LTnewLM_010009800 LTnewLM_1 AUGUSTUS CDS 119871 120367 0.77 + 0 ID=LTnewLM_010009800.1:CDS:1;Parent=LTnewLM_010009800.1 LTnewLM_1 AUGUSTUS CDS 120412 124468 0.89 + 1 ID=LTnewLM_010009800.1:CDS:2;Parent=LTnewLM_010009800.1 ### LTnewLM_1 . polypeptide 119871 124468 . + . ID=LTnewLM_010009800.1:pep;Derives_from=LTnewLM_010009800.1;orthologous_to=LmjF.01.0460_mRNA;ortholog_cluster=OG0000600;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 128465 130555 1 + . ID=LTnewLM_010009900 LTnewLM_1 AUGUSTUS mRNA 128465 130555 1 + . ID=LTnewLM_010009900.1;Parent=LTnewLM_010009900 LTnewLM_1 AUGUSTUS CDS 128465 130555 1 + 0 ID=LTnewLM_010009900.1:CDS:1;Parent=LTnewLM_010009900.1 ### LTnewLM_1 . polypeptide 128465 130555 . + . ID=LTnewLM_010009900.1:pep;Derives_from=LTnewLM_010009900.1;orthologous_to=LmjF.01.0470_mRNA;ortholog_cluster=OG0000601;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 128795 130138 . + . Parent=LTnewLM_010009900.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 131418 132497 1 + . ID=LTnewLM_010010000 LTnewLM_1 AUGUSTUS mRNA 131418 132497 1 + . ID=LTnewLM_010010000.1;Parent=LTnewLM_010010000 LTnewLM_1 AUGUSTUS CDS 131418 132497 1 + 0 ID=LTnewLM_010010000.1:CDS:1;Parent=LTnewLM_010010000.1 ### LTnewLM_1 . polypeptide 131418 132497 . + . ID=LTnewLM_010010000.1:pep;Derives_from=LTnewLM_010010000.1;orthologous_to=LmjF.01.0480_mRNA;ortholog_cluster=OG0000602;product=term%3DBeta-eliminating lyase/Aminotransferase class-V/Aminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01212|Pfam:PF00266|Pfam:PF00155;Ontology_term=GO:0008152,GO:0030170,GO:0006520,GO:0016829,GO:0009058 LTnewLM_1 Pfam protein_match 131502 132305 . + . Parent=LTnewLM_010010000.1:pep;Name=PF01212;signature_desc=Beta-eliminating lyase;Ontology_term=GO:0016829,GO:0006520 LTnewLM_1 Pfam protein_match 131544 132131 . + . Parent=LTnewLM_010010000.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 LTnewLM_1 Pfam protein_match 131574 131969 . + . Parent=LTnewLM_010010000.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_1 AUGUSTUS gene 134306 136402 1 + . ID=LTnewLM_010010100 LTnewLM_1 AUGUSTUS mRNA 134306 136402 1 + . ID=LTnewLM_010010100.1;Parent=LTnewLM_010010100 LTnewLM_1 AUGUSTUS CDS 134306 136402 1 + 0 ID=LTnewLM_010010100.1:CDS:1;Parent=LTnewLM_010010100.1 ### LTnewLM_1 . polypeptide 134306 136402 . + . ID=LTnewLM_010010100.1:pep;Derives_from=LTnewLM_010010100.1;orthologous_to=LmjF.01.0490_mRNA;ortholog_cluster=OG0000603;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 134618 135988 . + . Parent=LTnewLM_010010100.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 137513 139636 1 + . ID=LTnewLM_010010200 LTnewLM_1 AUGUSTUS mRNA 137513 139636 1 + . ID=LTnewLM_010010200.1;Parent=LTnewLM_010010200 LTnewLM_1 AUGUSTUS CDS 137513 139636 1 + 0 ID=LTnewLM_010010200.1:CDS:1;Parent=LTnewLM_010010200.1 ### LTnewLM_1 . polypeptide 137513 139636 . + . ID=LTnewLM_010010200.1:pep;Derives_from=LTnewLM_010010200.1;orthologous_to=LmjF.01.0500_mRNA;ortholog_cluster=OG0000604;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 137888 139222 . + . Parent=LTnewLM_010010200.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 . pseudogene 142927 143518 . + . ID=LTnewLM_010010300:pseudogene;coverage=0.989;sequence_ID=0.862;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0510_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 142927 143518 . + . ID=LTnewLM_010010300.1;Parent=LTnewLM_010010300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 142927 143518 . + . ID=LTnewLM_010010300.1:pseudogenic_exon:1;Parent=LTnewLM_010010300.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 142927 143518 . + . ID=LTnewLM_010010300.1:pep;Derives_from=LTnewLM_010010300.1;orthologous_to=LmjF.01.0510_mRNA;ortholog_cluster=OG0007416;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 144089 146236 1 + . ID=LTnewLM_010010400 LTnewLM_1 AUGUSTUS mRNA 144089 146236 1 + . ID=LTnewLM_010010400.1;Parent=LTnewLM_010010400 LTnewLM_1 AUGUSTUS CDS 144089 146236 1 + 0 ID=LTnewLM_010010400.1:CDS:1;Parent=LTnewLM_010010400.1 ### LTnewLM_1 . polypeptide 144089 146236 . + . ID=LTnewLM_010010400.1:pep;Derives_from=LTnewLM_010010400.1;orthologous_to=LmjF.01.0520_mRNA;ortholog_cluster=OG0000605;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 144476 145819 . + . Parent=LTnewLM_010010400.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 150361 155154 1 + . ID=LTnewLM_010010500 LTnewLM_1 AUGUSTUS mRNA 150361 155154 1 + . ID=LTnewLM_010010500.1;Parent=LTnewLM_010010500 LTnewLM_1 AUGUSTUS CDS 150361 155154 1 + 0 ID=LTnewLM_010010500.1:CDS:1;Parent=LTnewLM_010010500.1 ### LTnewLM_1 . polypeptide 150361 155154 . + . ID=LTnewLM_010010500.1:pep;Derives_from=LTnewLM_010010500.1;orthologous_to=LmjF.01.0530_mRNA;ortholog_cluster=OG0000606;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 152035 152436 . + . Parent=LTnewLM_010010500.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_1 Pfam protein_match 153772 154590 . + . Parent=LTnewLM_010010500.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_1 AUGUSTUS gene 156286 158283 1 + . ID=LTnewLM_010010600 LTnewLM_1 AUGUSTUS mRNA 156286 158283 1 + . ID=LTnewLM_010010600.1;Parent=LTnewLM_010010600 LTnewLM_1 AUGUSTUS CDS 156286 158283 1 + 0 ID=LTnewLM_010010600.1:CDS:1;Parent=LTnewLM_010010600.1 ### LTnewLM_1 . polypeptide 156286 158283 . + . ID=LTnewLM_010010600.1:pep;Derives_from=LTnewLM_010010600.1;orthologous_to=LmjF.01.0540_mRNA;ortholog_cluster=OG0000607;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 159766 161058 1 + . ID=LTnewLM_010010700 LTnewLM_1 AUGUSTUS mRNA 159766 161058 1 + . ID=LTnewLM_010010700.1;Parent=LTnewLM_010010700 LTnewLM_1 AUGUSTUS CDS 159766 161058 1 + 0 ID=LTnewLM_010010700.1:CDS:1;Parent=LTnewLM_010010700.1 ### LTnewLM_1 . polypeptide 159766 161058 . + . ID=LTnewLM_010010700.1:pep;Derives_from=LTnewLM_010010700.1;orthologous_to=LmjF.01.0550_mRNA;ortholog_cluster=OG0000608;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13917 LTnewLM_1 Pfam protein_match 160606 160671 . + . Parent=LTnewLM_010010700.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_1 Pfam protein_match 160792 160848 . + . Parent=LTnewLM_010010700.1:pep;Name=PF13917;signature_desc=Zinc knuckle ### LTnewLM_1 AUGUSTUS gene 162149 164032 1 + . ID=LTnewLM_010010800 LTnewLM_1 AUGUSTUS mRNA 162149 164032 1 + . ID=LTnewLM_010010800.1;Parent=LTnewLM_010010800 LTnewLM_1 AUGUSTUS CDS 162149 164032 1 + 0 ID=LTnewLM_010010800.1:CDS:1;Parent=LTnewLM_010010800.1 ### LTnewLM_1 . polypeptide 162149 164032 . + . ID=LTnewLM_010010800.1:pep;Derives_from=LTnewLM_010010800.1;orthologous_to=LmjF.01.0560_mRNA;ortholog_cluster=OG0000609;product=term%3Dpre-mRNA processing factor 3 (PRP3)/Protein of unknown function (DUF1115)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08572|Pfam:PF06544 LTnewLM_1 Pfam protein_match 162656 163444 . + . Parent=LTnewLM_010010800.1:pep;Name=PF08572;signature_desc=pre-mRNA processing factor 3 (PRP3) LTnewLM_1 Pfam protein_match 163523 163930 . + . Parent=LTnewLM_010010800.1:pep;Name=PF06544;signature_desc=Protein of unknown function (DUF1115) ### LTnewLM_1 AUGUSTUS gene 164649 165629 1 + . ID=LTnewLM_010010900 LTnewLM_1 AUGUSTUS mRNA 164649 165629 1 + . ID=LTnewLM_010010900.1;Parent=LTnewLM_010010900 LTnewLM_1 AUGUSTUS CDS 164649 165629 1 + 0 ID=LTnewLM_010010900.1:CDS:1;Parent=LTnewLM_010010900.1 ### LTnewLM_1 . polypeptide 164649 165629 . + . ID=LTnewLM_010010900.1:pep;Derives_from=LTnewLM_010010900.1;orthologous_to=LmjF.01.0570_mRNA;ortholog_cluster=OG0000610;product=term%3DSideroflexins%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03820;Ontology_term=GO:0016020,GO:0015075,GO:0006811,GO:0055085 LTnewLM_1 Pfam protein_match 164670 165623 . + . Parent=LTnewLM_010010900.1:pep;Name=PF03820;signature_desc=Sideroflexins;Ontology_term=GO:0015075,GO:0006811,GO:0055085,GO:0016020 ### LTnewLM_1 AUGUSTUS gene 166346 169234 1 + . ID=LTnewLM_010011000 LTnewLM_1 AUGUSTUS mRNA 166346 169234 1 + . ID=LTnewLM_010011000.1;Parent=LTnewLM_010011000 LTnewLM_1 AUGUSTUS CDS 166346 169234 1 + 0 ID=LTnewLM_010011000.1:CDS:1;Parent=LTnewLM_010011000.1 ### LTnewLM_1 . polypeptide 166346 169234 . + . ID=LTnewLM_010011000.1:pep;Derives_from=LTnewLM_010011000.1;orthologous_to=LmjF.01.0580_mRNA;ortholog_cluster=OG0000611;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 Liftoff gene 169977 171542 . + . ID=LTnewLM_010011100;coverage=0.985;sequence_ID=0.948;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.01.0590_0 LTnewLM_1 Liftoff mRNA 169977 171542 . + . ID=LTnewLM_010011100.1;Parent=LTnewLM_010011100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_1 Liftoff five_prime_UTR 169977 170075 . + . ID=LTnewLM_010011100:five_prime_UTR;Parent=LTnewLM_010011100.1;extra_copy_number=0 LTnewLM_1 Liftoff CDS 170076 171542 . + 0 ID=LTnewLM_010011100.1:CDS:1;Parent=LTnewLM_010011100.1;extra_copy_number=0 LTnewLM_1 Liftoff mRNA 170075 171542 . + . ID=LTnewLM_010011100.2;Parent=LTnewLM_010011100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_1 Liftoff five_prime_UTR 170075 170267 . + . ID=LTnewLM_010011100:five_prime_UTR.1;Parent=LTnewLM_010011100.2;extra_copy_number=0 LTnewLM_1 Liftoff CDS 170268 171542 . + 0 ID=LTnewLM_010011100.2:CDS:1;Parent=LTnewLM_010011100.2;extra_copy_number=0 ### LTnewLM_1 . polypeptide 170076 171542 . + . ID=LTnewLM_010011100.1:pep;Derives_from=LTnewLM_010011100.1;orthologous_to=LTnewLM_010011100.2,LmjF.01.0590.1_mRNA,LmjF.01.0590.2_mRNA;ortholog_cluster=OG0000104;product=term%3DRNA ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09414 LTnewLM_1 Pfam protein_match 170370 171044 . + . Parent=LTnewLM_010011100.1:pep;Name=PF09414;signature_desc=RNA ligase ### LTnewLM_1 . polypeptide 170268 171542 . + . ID=LTnewLM_010011100.2:pep;Derives_from=LTnewLM_010011100.2;orthologous_to=LTnewLM_010011100.1,LmjF.01.0590.1_mRNA,LmjF.01.0590.2_mRNA;ortholog_cluster=OG0000104;product=term%3DRNA ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09414 LTnewLM_1 Pfam protein_match 170370 171044 . + . Parent=LTnewLM_010011100.2:pep;Name=PF09414;signature_desc=RNA ligase ### LTnewLM_1 AUGUSTUS gene 172589 178060 1 + . ID=LTnewLM_010011200 LTnewLM_1 AUGUSTUS mRNA 172589 178060 1 + . ID=LTnewLM_010011200.1;Parent=LTnewLM_010011200 LTnewLM_1 AUGUSTUS CDS 172589 178060 1 + 0 ID=LTnewLM_010011200.1:CDS:1;Parent=LTnewLM_010011200.1 ### LTnewLM_1 . polypeptide 172589 178060 . + . ID=LTnewLM_010011200.1:pep;Derives_from=LTnewLM_010011200.1;orthologous_to=LmjF.01.0600_mRNA;ortholog_cluster=OG0000612;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_1 Pfam protein_match 176270 176599 . + . Parent=LTnewLM_010011200.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 LTnewLM_1 Pfam protein_match 176774 177025 . + . Parent=LTnewLM_010011200.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_1 AUGUSTUS gene 178584 179747 1 + . ID=LTnewLM_010011300 LTnewLM_1 AUGUSTUS mRNA 178584 179747 1 + . ID=LTnewLM_010011300.1;Parent=LTnewLM_010011300 LTnewLM_1 AUGUSTUS CDS 178584 179747 1 + 0 ID=LTnewLM_010011300.1:CDS:1;Parent=LTnewLM_010011300.1 ### LTnewLM_1 . polypeptide 178584 179747 . + . ID=LTnewLM_010011300.1:pep;Derives_from=LTnewLM_010011300.1;orthologous_to=LmjF.01.0610_mRNA;ortholog_cluster=OG0000613;product=term%3DAspartyl protease/gag-polyprotein putative aspartyl protease/UBA-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09668|Pfam:PF13650|Pfam:PF13975|Pfam:PF14555;Ontology_term=GO:0004190,GO:0006508 LTnewLM_1 Pfam protein_match 179067 179435 . + . Parent=LTnewLM_010011300.1:pep;Name=PF09668;signature_desc=Aspartyl protease;Ontology_term=GO:0004190,GO:0006508 LTnewLM_1 Pfam protein_match 179145 179405 . + . Parent=LTnewLM_010011300.1:pep;Name=PF13650;signature_desc=Aspartyl protease LTnewLM_1 Pfam protein_match 179145 179417 . + . Parent=LTnewLM_010011300.1:pep;Name=PF13975;signature_desc=gag-polyprotein putative aspartyl protease LTnewLM_1 Pfam protein_match 179634 179741 . + . Parent=LTnewLM_010011300.1:pep;Name=PF14555;signature_desc=UBA-like domain ### LTnewLM_1 AUGUSTUS gene 180270 182111 1 + . ID=LTnewLM_010011400 LTnewLM_1 AUGUSTUS mRNA 180270 182111 1 + . ID=LTnewLM_010011400.1;Parent=LTnewLM_010011400 LTnewLM_1 AUGUSTUS CDS 180270 182111 1 + 0 ID=LTnewLM_010011400.1:CDS:1;Parent=LTnewLM_010011400.1 ### LTnewLM_1 . polypeptide 180270 182111 . + . ID=LTnewLM_010011400.1:pep;Derives_from=LTnewLM_010011400.1;orthologous_to=LmjF.01.0620_mRNA;ortholog_cluster=OG0000614;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 183893 186685 1 + . ID=LTnewLM_010011500 LTnewLM_1 AUGUSTUS mRNA 183893 186685 1 + . ID=LTnewLM_010011500.1;Parent=LTnewLM_010011500 LTnewLM_1 AUGUSTUS CDS 183893 186685 1 + 0 ID=LTnewLM_010011500.1:CDS:1;Parent=LTnewLM_010011500.1 ### LTnewLM_1 . polypeptide 183893 186685 . + . ID=LTnewLM_010011500.1:pep;Derives_from=LTnewLM_010011500.1;orthologous_to=LmjF.01.0630_mRNA;ortholog_cluster=OG0000615;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 188256 191585 1 + . ID=LTnewLM_010011600 LTnewLM_1 AUGUSTUS mRNA 188256 191585 1 + . ID=LTnewLM_010011600.1;Parent=LTnewLM_010011600 LTnewLM_1 AUGUSTUS CDS 188256 191585 1 + 0 ID=LTnewLM_010011600.1:CDS:1;Parent=LTnewLM_010011600.1 ### LTnewLM_1 . polypeptide 188256 191585 . + . ID=LTnewLM_010011600.1:pep;Derives_from=LTnewLM_010011600.1;orthologous_to=LmjF.01.0640_mRNA;ortholog_cluster=OG0000616;product=term%3DHsp70 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012 LTnewLM_1 Pfam protein_match 189411 190310 . + . Parent=LTnewLM_010011600.1:pep;Name=PF00012;signature_desc=Hsp70 protein ### LTnewLM_1 AUGUSTUS gene 192479 193963 1 + . ID=LTnewLM_010011700 LTnewLM_1 AUGUSTUS mRNA 192479 193963 1 + . ID=LTnewLM_010011700.1;Parent=LTnewLM_010011700 LTnewLM_1 AUGUSTUS CDS 192479 193963 1 + 0 ID=LTnewLM_010011700.1:CDS:1;Parent=LTnewLM_010011700.1 ### LTnewLM_1 . polypeptide 192479 193963 . + . ID=LTnewLM_010011700.1:pep;Derives_from=LTnewLM_010011700.1;orthologous_to=LmjF.01.0650_mRNA;ortholog_cluster=OG0000617;product=term%3DInsulinase (Peptidase family M16)/Peptidase M16 inactive domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00675|Pfam:PF05193 LTnewLM_1 Pfam protein_match 192611 193042 . + . Parent=LTnewLM_010011700.1:pep;Name=PF00675;signature_desc=Insulinase (Peptidase family M16) LTnewLM_1 Pfam protein_match 193079 193405 . + . Parent=LTnewLM_010011700.1:pep;Name=PF05193;signature_desc=Peptidase M16 inactive domain ### LTnewLM_1 AUGUSTUS gene 195065 199675 1 + . ID=LTnewLM_010011800 LTnewLM_1 AUGUSTUS mRNA 195065 199675 1 + . ID=LTnewLM_010011800.1;Parent=LTnewLM_010011800 LTnewLM_1 AUGUSTUS CDS 195065 199675 1 + 0 ID=LTnewLM_010011800.1:CDS:1;Parent=LTnewLM_010011800.1 ### LTnewLM_1 . polypeptide 195065 199675 . + . ID=LTnewLM_010011800.1:pep;Derives_from=LTnewLM_010011800.1;orthologous_to=LmjF.01.0660_mRNA;ortholog_cluster=OG0000618;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 200676 201593 1 + . ID=LTnewLM_010011900 LTnewLM_1 AUGUSTUS mRNA 200676 201593 1 + . ID=LTnewLM_010011900.1;Parent=LTnewLM_010011900 LTnewLM_1 AUGUSTUS CDS 200676 201593 1 + 0 ID=LTnewLM_010011900.1:CDS:1;Parent=LTnewLM_010011900.1 ### LTnewLM_1 . polypeptide 200676 201593 . + . ID=LTnewLM_010011900.1:pep;Derives_from=LTnewLM_010011900.1;orthologous_to=LmjF.01.0670_mRNA;ortholog_cluster=OG0000619;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 . pseudogene 205183 207569 . + . ID=LTnewLM_010012000:pseudogene;coverage=0.969;sequence_ID=0.885;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0680_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 205183 207569 . + . ID=LTnewLM_010012000.1;Parent=LTnewLM_010012000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 205183 207569 . + . ID=LTnewLM_010012000.1:pseudogenic_exon:1;Parent=LTnewLM_010012000.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 205183 207569 . + . ID=LTnewLM_010012000.1:pep;Derives_from=LTnewLM_010012000.1;product=term%3Dhypothetical protein ### LTnewLM_1 AUGUSTUS gene 209635 210324 1 + . ID=LTnewLM_010012100 LTnewLM_1 AUGUSTUS mRNA 209635 210324 1 + . ID=LTnewLM_010012100.1;Parent=LTnewLM_010012100 LTnewLM_1 AUGUSTUS CDS 209635 210324 1 + 0 ID=LTnewLM_010012100.1:CDS:1;Parent=LTnewLM_010012100.1 ### LTnewLM_1 . polypeptide 209635 210324 . + . ID=LTnewLM_010012100.1:pep;Derives_from=LTnewLM_010012100.1;orthologous_to=LmjF.01.0690_mRNA;ortholog_cluster=OG0000620;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_1 Pfam protein_match 209857 210237 . + . Parent=LTnewLM_010012100.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_1 AUGUSTUS gene 212624 214162 1.97 + . ID=LTnewLM_010012200 LTnewLM_1 AUGUSTUS mRNA 212624 214162 1 + . ID=LTnewLM_010012200.1;Parent=LTnewLM_010012200 LTnewLM_1 AUGUSTUS CDS 212624 214162 1 + 0 ID=LTnewLM_010012200.1:CDS:1;Parent=LTnewLM_010012200.1 LTnewLM_1 AUGUSTUS mRNA 213125 214162 0.97 + . ID=LTnewLM_010012200.2;Parent=LTnewLM_010012200 LTnewLM_1 AUGUSTUS CDS 213125 214162 0.97 + 0 ID=LTnewLM_010012200.2:CDS:1;Parent=LTnewLM_010012200.2 ### LTnewLM_1 . polypeptide 212624 214162 . + . ID=LTnewLM_010012200.1:pep;Derives_from=LTnewLM_010012200.1;orthologous_to=LTnewLM_010012200.2,LmjF.01.0700_mRNA;ortholog_cluster=OG0000306;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_1 Pfam protein_match 213314 213976 . + . Parent=LTnewLM_010012200.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_1 . polypeptide 213125 214162 . + . ID=LTnewLM_010012200.2:pep;Derives_from=LTnewLM_010012200.2;orthologous_to=LTnewLM_010012200.1,LmjF.01.0700_mRNA;ortholog_cluster=OG0000306;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_1 Pfam protein_match 213314 213976 . + . Parent=LTnewLM_010012200.2:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_1 AUGUSTUS gene 216462 218087 1 + . ID=LTnewLM_010012300 LTnewLM_1 AUGUSTUS mRNA 216462 218087 1 + . ID=LTnewLM_010012300.1;Parent=LTnewLM_010012300 LTnewLM_1 AUGUSTUS CDS 216462 218087 1 + 0 ID=LTnewLM_010012300.1:CDS:1;Parent=LTnewLM_010012300.1 ### LTnewLM_1 . polypeptide 216462 218087 . + . ID=LTnewLM_010012300.1:pep;Derives_from=LTnewLM_010012300.1;orthologous_to=LmjF.01.0710_mRNA;ortholog_cluster=OG0000621;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_1 Pfam protein_match 216534 217691 . + . Parent=LTnewLM_010012300.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_1 AUGUSTUS gene 218625 223553 1 + . ID=LTnewLM_010012400 LTnewLM_1 AUGUSTUS mRNA 218625 223553 1 + . ID=LTnewLM_010012400.1;Parent=LTnewLM_010012400 LTnewLM_1 AUGUSTUS CDS 218625 223553 1 + 0 ID=LTnewLM_010012400.1:CDS:1;Parent=LTnewLM_010012400.1 ### LTnewLM_1 . polypeptide 218625 223553 . + . ID=LTnewLM_010012400.1:pep;Derives_from=LTnewLM_010012400.1;orthologous_to=LmjF.01.0720_mRNA;ortholog_cluster=OG0000622;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 224516 231529 1 + . ID=LTnewLM_010012500 LTnewLM_1 AUGUSTUS mRNA 224516 231529 1 + . ID=LTnewLM_010012500.1;Parent=LTnewLM_010012500 LTnewLM_1 AUGUSTUS CDS 224516 231529 1 + 0 ID=LTnewLM_010012500.1:CDS:1;Parent=LTnewLM_010012500.1 ### LTnewLM_1 . polypeptide 224516 231529 . + . ID=LTnewLM_010012500.1:pep;Derives_from=LTnewLM_010012500.1;orthologous_to=LmjF.01.0730_mRNA;ortholog_cluster=OG0000623;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 232345 234600 1 + . ID=LTnewLM_010012600 LTnewLM_1 AUGUSTUS mRNA 232345 234600 1 + . ID=LTnewLM_010012600.1;Parent=LTnewLM_010012600 LTnewLM_1 AUGUSTUS CDS 232345 234600 1 + 0 ID=LTnewLM_010012600.1:CDS:1;Parent=LTnewLM_010012600.1 ### LTnewLM_1 . polypeptide 232345 234600 . + . ID=LTnewLM_010012600.1:pep;Derives_from=LTnewLM_010012600.1;orthologous_to=LmjF.01.0740_mRNA;ortholog_cluster=OG0000624;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 235935 240204 0.95 + . ID=LTnewLM_010012700 LTnewLM_1 AUGUSTUS mRNA 235935 240204 0.95 + . ID=LTnewLM_010012700.1;Parent=LTnewLM_010012700 LTnewLM_1 AUGUSTUS CDS 235935 236630 1 + 0 ID=LTnewLM_010012700.1:CDS:1;Parent=LTnewLM_010012700.1 LTnewLM_1 AUGUSTUS CDS 236698 240204 0.95 + 0 ID=LTnewLM_010012700.1:CDS:2;Parent=LTnewLM_010012700.1 ### LTnewLM_1 . polypeptide 235935 240204 . + . ID=LTnewLM_010012700.1:pep;Derives_from=LTnewLM_010012700.1;orthologous_to=LmjF.01.0750_mRNA;ortholog_cluster=OG0000625;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 Liftoff gene 240795 241811 . + . ID=LTnewLM_010012800;coverage=0.997;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0760_0 LTnewLM_1 Liftoff mRNA 240795 241811 . + . ID=LTnewLM_010012800.1;Parent=LTnewLM_010012800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_1 Liftoff CDS 240795 241811 . + 0 ID=LTnewLM_010012800.1:CDS:1;Parent=LTnewLM_010012800.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 240795 241811 . + . ID=LTnewLM_010012800.1:pep;Derives_from=LTnewLM_010012800.1;orthologous_to=LmjF.01.0760_mRNA;ortholog_cluster=OG0000626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 242664 243875 1 + . ID=LTnewLM_010012900 LTnewLM_1 AUGUSTUS mRNA 242664 243875 1 + . ID=LTnewLM_010012900.1;Parent=LTnewLM_010012900 LTnewLM_1 AUGUSTUS CDS 242664 243875 1 + 0 ID=LTnewLM_010012900.1:CDS:1;Parent=LTnewLM_010012900.1 ### LTnewLM_1 . polypeptide 242664 243875 . + . ID=LTnewLM_010012900.1:pep;Derives_from=LTnewLM_010012900.1;orthologous_to=LTnewLM_010013000.1,LmjF.01.0770_mRNA,LmjF.01.0780_mRNA;ortholog_cluster=OG0000105;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_1 Pfam protein_match 242814 243311 . + . Parent=LTnewLM_010012900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_1 Pfam protein_match 243423 243746 . + . Parent=LTnewLM_010012900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_1 AUGUSTUS gene 246168 247379 1 + . ID=LTnewLM_010013000 LTnewLM_1 AUGUSTUS mRNA 246168 247379 1 + . ID=LTnewLM_010013000.1;Parent=LTnewLM_010013000 LTnewLM_1 AUGUSTUS CDS 246168 247379 1 + 0 ID=LTnewLM_010013000.1:CDS:1;Parent=LTnewLM_010013000.1 ### LTnewLM_1 . polypeptide 246168 247379 . + . ID=LTnewLM_010013000.1:pep;Derives_from=LTnewLM_010013000.1;orthologous_to=LTnewLM_010012900.1,LmjF.01.0770_mRNA,LmjF.01.0780_mRNA;ortholog_cluster=OG0000105;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_1 Pfam protein_match 246318 246815 . + . Parent=LTnewLM_010013000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_1 Pfam protein_match 246927 247250 . + . Parent=LTnewLM_010013000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_1 AUGUSTUS gene 249485 251077 1 + . ID=LTnewLM_010013100 LTnewLM_1 AUGUSTUS mRNA 249485 251077 1 + . ID=LTnewLM_010013100.1;Parent=LTnewLM_010013100 LTnewLM_1 AUGUSTUS CDS 249485 251077 1 + 0 ID=LTnewLM_010013100.1:CDS:1;Parent=LTnewLM_010013100.1 ### LTnewLM_1 . polypeptide 249485 251077 . + . ID=LTnewLM_010013100.1:pep;Derives_from=LTnewLM_010013100.1;orthologous_to=LmjF.01.0790_mRNA;ortholog_cluster=OG0000627;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 Liftoff gene 253020 254543 . + . ID=LTnewLM_010013200;coverage=0.996;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0800_0 LTnewLM_1 Liftoff mRNA 253020 254543 . + . ID=LTnewLM_010013200.1;Parent=LTnewLM_010013200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_1 Liftoff CDS 253020 254543 . + 0 ID=LTnewLM_010013200.1:CDS:1;Parent=LTnewLM_010013200.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 253020 254543 . + . ID=LTnewLM_010013200.1:pep;Derives_from=LTnewLM_010013200.1;orthologous_to=LmjF.01.0800_mRNA;ortholog_cluster=OG0000628;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_1 AUGUSTUS gene 255902 258955 1 + . ID=LTnewLM_010013300 LTnewLM_1 AUGUSTUS mRNA 255902 258955 1 + . ID=LTnewLM_010013300.1;Parent=LTnewLM_010013300 LTnewLM_1 AUGUSTUS CDS 255902 258955 1 + 0 ID=LTnewLM_010013300.1:CDS:1;Parent=LTnewLM_010013300.1 ### LTnewLM_1 . polypeptide 255902 258955 . + . ID=LTnewLM_010013300.1:pep;Derives_from=LTnewLM_010013300.1;orthologous_to=LmjF.01.0810_mRNA;ortholog_cluster=OG0000629;product=term%3DIon channel/Calcium-activated BK potassium channel alpha subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885|Pfam:PF03493;Ontology_term=GO:0015269,GO:0016020,GO:0006813 LTnewLM_1 Pfam protein_match 256499 256705 . + . Parent=LTnewLM_010013300.1:pep;Name=PF07885;signature_desc=Ion channel LTnewLM_1 Pfam protein_match 257186 257449 . + . Parent=LTnewLM_010013300.1:pep;Name=PF03493;signature_desc=Calcium-activated BK potassium channel alpha subunit;Ontology_term=GO:0015269,GO:0006813,GO:0016020 ### LTnewLM_1 AUGUSTUS gene 259213 259548 0.61 + . ID=LTnewLM_010013400 LTnewLM_1 AUGUSTUS mRNA 259213 259548 0.61 + . ID=LTnewLM_010013400.1;Parent=LTnewLM_010013400 LTnewLM_1 AUGUSTUS CDS 259213 259548 0.61 + 0 ID=LTnewLM_010013400.1:CDS:1;Parent=LTnewLM_010013400.1 ### LTnewLM_1 . polypeptide 259213 259548 . + . ID=LTnewLM_010013400.1:pep;Derives_from=LTnewLM_010013400.1;product=term%3Dhypothetical protein ### LTnewLM_1 AUGUSTUS gene 260568 264050 1 + . ID=LTnewLM_010013500 LTnewLM_1 AUGUSTUS mRNA 260568 264050 1 + . ID=LTnewLM_010013500.1;Parent=LTnewLM_010013500 LTnewLM_1 AUGUSTUS CDS 260568 264050 1 + 0 ID=LTnewLM_010013500.1:CDS:1;Parent=LTnewLM_010013500.1 ### LTnewLM_1 . polypeptide 260568 264050 . + . ID=LTnewLM_010013500.1:pep;Derives_from=LTnewLM_010013500.1;orthologous_to=LmjF.01.0820_mRNA;ortholog_cluster=OG0000630;product=term%3DIon channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885 LTnewLM_1 Pfam protein_match 261438 261629 . + . Parent=LTnewLM_010013500.1:pep;Name=PF07885;signature_desc=Ion channel ### LTnewLM_1 . pseudogene 267095 269128 . + . ID=LTnewLM_010013600:pseudogene;coverage=0.993;sequence_ID=0.886;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.01.0830_0;has_internal_stop=true LTnewLM_1 . pseudogenic_transcript 267095 269128 . + . ID=LTnewLM_010013600.1;Parent=LTnewLM_010013600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_1 . pseudogenic_exon 267095 269128 . + . ID=LTnewLM_010013600.1:pseudogenic_exon:1;Parent=LTnewLM_010013600.1;extra_copy_number=0 ### LTnewLM_1 . polypeptide 267095 269128 . + . ID=LTnewLM_010013600.1:pep;Derives_from=LTnewLM_010013600.1;orthologous_to=LTnewLM_020013100.1,LTnewLM_270036000.1,LmjF.01.0830_mRNA,LmjF.02.0740_mRNA,LmjF.27.2660_mRNA;ortholog_cluster=OG0000077;product=term%3DPeptidase family M3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01432;Ontology_term=GO:0004222,GO:0006508 LTnewLM_1 Pfam protein_match 268448 269104 . + . Parent=LTnewLM_010013600.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 ### LTnewLM_1 AUGUSTUS gene 269828 270609 0.44 - . ID=LTnewLM_010013700 LTnewLM_1 AUGUSTUS mRNA 269828 270609 0.44 - . ID=LTnewLM_010013700.1;Parent=LTnewLM_010013700 LTnewLM_1 AUGUSTUS CDS 269828 269963 0.74 - 1 ID=LTnewLM_010013700.1:CDS:1;Parent=LTnewLM_010013700.1 LTnewLM_1 AUGUSTUS CDS 270065 270609 0.44 - 0 ID=LTnewLM_010013700.1:CDS:2;Parent=LTnewLM_010013700.1 ### LTnewLM_1 . polypeptide 269828 270609 . - . ID=LTnewLM_010013700.1:pep;Derives_from=LTnewLM_010013700.1;product=term%3Dhypothetical protein ### LTnewLM_1 AUGUSTUS gene 271185 271517 0.78 - . ID=LTnewLM_010013800 LTnewLM_1 AUGUSTUS mRNA 271185 271517 0.78 - . ID=LTnewLM_010013800.1;Parent=LTnewLM_010013800 LTnewLM_1 AUGUSTUS CDS 271185 271517 0.78 - 0 ID=LTnewLM_010013800.1:CDS:1;Parent=LTnewLM_010013800.1 ### LTnewLM_1 . polypeptide 271185 271517 . - . ID=LTnewLM_010013800.1:pep;Derives_from=LTnewLM_010013800.1;product=term%3Dhypothetical protein ### LTnewLM_1 AUGUSTUS gene 271601 271837 0.78 - . ID=LTnewLM_010013900 LTnewLM_1 AUGUSTUS mRNA 271601 271837 0.78 - . ID=LTnewLM_010013900.1;Parent=LTnewLM_010013900 LTnewLM_1 AUGUSTUS CDS 271601 271837 0.78 - 0 ID=LTnewLM_010013900.1:CDS:1;Parent=LTnewLM_010013900.1 ### LTnewLM_1 . polypeptide 271601 271837 . - . ID=LTnewLM_010013900.1:pep;Derives_from=LTnewLM_010013900.1;product=term%3Dhypothetical protein ### LTnewLM_1 AUGUSTUS gene 273755 274186 1 + . ID=LTnewLM_010014000 LTnewLM_1 AUGUSTUS mRNA 273755 274186 1 + . ID=LTnewLM_010014000.1;Parent=LTnewLM_010014000 LTnewLM_1 AUGUSTUS CDS 273755 274186 1 + 0 ID=LTnewLM_010014000.1:CDS:1;Parent=LTnewLM_010014000.1 ### LTnewLM_1 . polypeptide 273755 274186 . + . ID=LTnewLM_010014000.1:pep;Derives_from=LTnewLM_010014000.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 1 1200 0.58 + . ID=LTnewLM_100005000;fiveEndPartial=true;Start_range=.,. LTnewLM_10 AUGUSTUS mRNA 1 1200 0.58 + . ID=LTnewLM_100005000.1;Parent=LTnewLM_100005000 LTnewLM_10 AUGUSTUS CDS 1022 1200 0.58 + 2 ID=LTnewLM_100005000.1:CDS:1;Parent=LTnewLM_100005000.1 ### LTnewLM_10 . contig 1 564088 . + . Name=LTnewLM_CTG000009 LTnewLM_10 . polypeptide 1022 1200 . + . ID=LTnewLM_100005000.1:pep;Derives_from=LTnewLM_100005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 7565 8749 1 - . ID=LTnewLM_100005100 LTnewLM_10 AUGUSTUS mRNA 7565 8749 1 - . ID=LTnewLM_100005100.1;Parent=LTnewLM_100005100 LTnewLM_10 AUGUSTUS CDS 7565 8749 1 - 0 ID=LTnewLM_100005100.1:CDS:1;Parent=LTnewLM_100005100.1 ### LTnewLM_10 . polypeptide 7565 8749 . - . ID=LTnewLM_100005100.1:pep;Derives_from=LTnewLM_100005100.1;orthologous_to=LTnewLM_100021200.1,LmjF.10.0010_mRNA,LmjF.10.1320_mRNA;ortholog_cluster=OG0000106;product=term%3DFatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487;Ontology_term=GO:0006629 LTnewLM_10 Pfam protein_match 7685 8458 . - . Parent=LTnewLM_100005100.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_10 AUGUSTUS gene 11698 13677 1 - . ID=LTnewLM_100005200 LTnewLM_10 AUGUSTUS mRNA 11698 13677 1 - . ID=LTnewLM_100005200.1;Parent=LTnewLM_100005200 LTnewLM_10 AUGUSTUS CDS 11698 13677 1 - 0 ID=LTnewLM_100005200.1:CDS:1;Parent=LTnewLM_100005200.1 ### LTnewLM_10 . polypeptide 11698 13677 . - . ID=LTnewLM_100005200.1:pep;Derives_from=LTnewLM_100005200.1;orthologous_to=LTnewLM_100021100.1,LmjF.10.0020_mRNA,LmjF.10.1310_mRNA;ortholog_cluster=OG0000107;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 11812 13449 . - . Parent=LTnewLM_100005200.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 AUGUSTUS gene 15686 17167 1 - . ID=LTnewLM_100005300 LTnewLM_10 AUGUSTUS mRNA 15686 17167 1 - . ID=LTnewLM_100005300.1;Parent=LTnewLM_100005300 LTnewLM_10 AUGUSTUS CDS 15686 17167 1 - 0 ID=LTnewLM_100005300.1:CDS:1;Parent=LTnewLM_100005300.1 ### LTnewLM_10 . polypeptide 15686 17167 . - . ID=LTnewLM_100005300.1:pep;Derives_from=LTnewLM_100005300.1;orthologous_to=LTnewLM_100021000.1,LTnewLM_200005300.1,LmjF.10.0030_mRNA,LmjF.10.1300_mRNA;ortholog_cluster=OG0000079;product=term%3DPhosphate transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01384;Ontology_term=GO:0006817,GO:0016020,GO:0005315 LTnewLM_10 Pfam protein_match 15731 17095 . - . Parent=LTnewLM_100005300.1:pep;Name=PF01384;signature_desc=Phosphate transporter family;Ontology_term=GO:0005315,GO:0006817,GO:0016020 ### LTnewLM_10 . pseudogene 18020 19356 630 - . ID=LTnewLM_100005400:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.29.0280:mRNA 49 492;original_prot_length=492 LTnewLM_10 . pseudogenic_transcript 18020 19356 . - . ID=LTnewLM_100005400.1;Parent=LTnewLM_100005400:pseudogene LTnewLM_10 . pseudogenic_exon 18020 18049 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:1;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18052 18192 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:2;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18194 18259 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:3;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18262 18384 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:4;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18386 18541 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:5;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18549 18677 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:6;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18679 18684 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:7;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 18686 19027 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:8;Parent=LTnewLM_100005400.1 LTnewLM_10 . pseudogenic_exon 19030 19356 . - . ID=LTnewLM_100005400.1:pseudogenic_exon:9;Parent=LTnewLM_100005400.1 ### LTnewLM_10 . polypeptide 18020 19356 . - . ID=LTnewLM_100005400.1:pep;Derives_from=LTnewLM_100005400.1;orthologous_to=LTnewLM_290007900.1,LmjF.29.0280_mRNA;ortholog_cluster=OG0000422;product=term%3DFAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565;Ontology_term=GO:0055114,GO:0008762,GO:0050660,GO:0016491 LTnewLM_10 Pfam protein_match 19054 19296 . - . Parent=LTnewLM_100005400.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_10 . pseudogene 26097 29294 . + . ID=LTnewLM_100005500:pseudogene;coverage=1.0;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0040_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 26097 29294 . + . ID=LTnewLM_100005500.1;Parent=LTnewLM_100005500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 26097 29294 . + . ID=LTnewLM_100005500.1:pseudogenic_exon:1;Parent=LTnewLM_100005500.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 26097 29294 . + . ID=LTnewLM_100005500.1:pep;Derives_from=LTnewLM_100005500.1;orthologous_to=LmjF.10.0040_mRNA;ortholog_cluster=OG0007417;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 30029 32896 1 + . ID=LTnewLM_100005600 LTnewLM_10 AUGUSTUS mRNA 30029 32896 1 + . ID=LTnewLM_100005600.1;Parent=LTnewLM_100005600 LTnewLM_10 AUGUSTUS CDS 30029 32896 1 + 0 ID=LTnewLM_100005600.1:CDS:1;Parent=LTnewLM_100005600.1 ### LTnewLM_10 . polypeptide 30029 32896 . + . ID=LTnewLM_100005600.1:pep;Derives_from=LTnewLM_100005600.1;orthologous_to=LmjF.10.0050_mRNA;ortholog_cluster=OG0000631;product=term%3DDos2-interacting transcription regulator of RNA-Pol-II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14500 LTnewLM_10 Pfam protein_match 30170 30898 . + . Parent=LTnewLM_100005600.1:pep;Name=PF14500;signature_desc=Dos2-interacting transcription regulator of RNA-Pol-II ### LTnewLM_10 AUGUSTUS gene 33725 34816 1 + . ID=LTnewLM_100005700 LTnewLM_10 AUGUSTUS mRNA 33725 34816 1 + . ID=LTnewLM_100005700.1;Parent=LTnewLM_100005700 LTnewLM_10 AUGUSTUS CDS 33725 34816 1 + 0 ID=LTnewLM_100005700.1:CDS:1;Parent=LTnewLM_100005700.1 ### LTnewLM_10 . polypeptide 33725 34816 . + . ID=LTnewLM_100005700.1:pep;Derives_from=LTnewLM_100005700.1;orthologous_to=LmjF.10.0060_mRNA;ortholog_cluster=OG0000632;product=term%3DThymidylate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02223 LTnewLM_10 Pfam protein_match 34151 34675 . + . Parent=LTnewLM_100005700.1:pep;Name=PF02223;signature_desc=Thymidylate kinase ### LTnewLM_10 AUGUSTUS gene 36503 36937 1 + . ID=LTnewLM_100005800 LTnewLM_10 AUGUSTUS mRNA 36503 36937 1 + . ID=LTnewLM_100005800.1;Parent=LTnewLM_100005800 LTnewLM_10 AUGUSTUS CDS 36503 36937 1 + 0 ID=LTnewLM_100005800.1:CDS:1;Parent=LTnewLM_100005800.1 ### LTnewLM_10 . polypeptide 36503 36937 . + . ID=LTnewLM_100005800.1:pep;Derives_from=LTnewLM_100005800.1;orthologous_to=LTnewLM_340030000.1,LmjF.10.0070_mRNA,LmjF.34.2470_mRNA;ortholog_cluster=OG0000108;product=term%3DRibosomal protein L35Ae%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01247;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_10 Pfam protein_match 36599 36913 . + . Parent=LTnewLM_100005800.1:pep;Name=PF01247;signature_desc=Ribosomal protein L35Ae;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_10 AUGUSTUS gene 37534 38565 1 + . ID=LTnewLM_100005900 LTnewLM_10 AUGUSTUS mRNA 37534 38565 1 + . ID=LTnewLM_100005900.1;Parent=LTnewLM_100005900 LTnewLM_10 AUGUSTUS CDS 37534 38565 1 + 0 ID=LTnewLM_100005900.1:CDS:1;Parent=LTnewLM_100005900.1 ### LTnewLM_10 . polypeptide 37534 38565 . + . ID=LTnewLM_100005900.1:pep;Derives_from=LTnewLM_100005900.1;orthologous_to=LmjF.10.0080_mRNA;ortholog_cluster=OG0000633;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 42618 43856 1 + . ID=LTnewLM_100006000 LTnewLM_10 AUGUSTUS mRNA 42618 43856 1 + . ID=LTnewLM_100006000.1;Parent=LTnewLM_100006000 LTnewLM_10 AUGUSTUS CDS 42618 43856 1 + 0 ID=LTnewLM_100006000.1:CDS:1;Parent=LTnewLM_100006000.1 ### LTnewLM_10 . polypeptide 42618 43856 . + . ID=LTnewLM_100006000.1:pep;Derives_from=LTnewLM_100006000.1;orthologous_to=LmjF.10.0090_mRNA;ortholog_cluster=OG0000634;product=term%3Dshort chain dehydrogenase/KR domain/NAD dependent epimerase/dehydratase family/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF08659|Pfam:PF01370|Pfam:PF13561;Ontology_term=GO:0003824,GO:0016491,GO:0008152,GO:0050662 LTnewLM_10 Pfam protein_match 42957 43367 . + . Parent=LTnewLM_100006000.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_10 Pfam protein_match 42960 43223 . + . Parent=LTnewLM_100006000.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_10 Pfam protein_match 42960 43535 . + . Parent=LTnewLM_100006000.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_10 Pfam protein_match 42981 43373 . + . Parent=LTnewLM_100006000.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_10 AUGUSTUS gene 45103 45876 1 + . ID=LTnewLM_100006100 LTnewLM_10 AUGUSTUS mRNA 45103 45876 1 + . ID=LTnewLM_100006100.1;Parent=LTnewLM_100006100 LTnewLM_10 AUGUSTUS CDS 45103 45876 1 + 0 ID=LTnewLM_100006100.1:CDS:1;Parent=LTnewLM_100006100.1 ### LTnewLM_10 . polypeptide 45103 45876 . + . ID=LTnewLM_100006100.1:pep;Derives_from=LTnewLM_100006100.1;orthologous_to=LmjF.10.0100_mRNA;ortholog_cluster=OG0000635;product=term%3DSRP40%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05022 LTnewLM_10 Pfam protein_match 45652 45852 . + . Parent=LTnewLM_100006100.1:pep;Name=PF05022;signature_desc=SRP40%2C C-terminal domain ### LTnewLM_10 AUGUSTUS gene 46929 48116 1 + . ID=LTnewLM_100006200 LTnewLM_10 AUGUSTUS mRNA 46929 48116 1 + . ID=LTnewLM_100006200.1;Parent=LTnewLM_100006200 LTnewLM_10 AUGUSTUS CDS 46929 48116 1 + 0 ID=LTnewLM_100006200.1:CDS:1;Parent=LTnewLM_100006200.1 ### LTnewLM_10 . polypeptide 46929 48116 . + . ID=LTnewLM_100006200.1:pep;Derives_from=LTnewLM_100006200.1;orthologous_to=LmjF.10.0110_mRNA;ortholog_cluster=OG0000636;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 47031 47126 . + . Parent=LTnewLM_100006200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 47166 47279 . + . Parent=LTnewLM_100006200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 47325 47420 . + . Parent=LTnewLM_100006200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 47448 47573 . + . Parent=LTnewLM_100006200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 47961 48089 . + . Parent=LTnewLM_100006200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_10 AUGUSTUS gene 49423 50562 1 + . ID=LTnewLM_100006300 LTnewLM_10 AUGUSTUS mRNA 49423 50562 1 + . ID=LTnewLM_100006300.1;Parent=LTnewLM_100006300 LTnewLM_10 AUGUSTUS CDS 49423 50562 1 + 0 ID=LTnewLM_100006300.1:CDS:1;Parent=LTnewLM_100006300.1 ### LTnewLM_10 . polypeptide 49423 50562 . + . ID=LTnewLM_100006300.1:pep;Derives_from=LTnewLM_100006300.1;orthologous_to=LmjF.10.0120_mRNA;ortholog_cluster=OG0000637;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_10 Pfam protein_match 50191 50445 . + . Parent=LTnewLM_100006300.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_10 AUGUSTUS gene 56189 58405 1 + . ID=LTnewLM_100006400 LTnewLM_10 AUGUSTUS mRNA 56189 58405 1 + . ID=LTnewLM_100006400.1;Parent=LTnewLM_100006400 LTnewLM_10 AUGUSTUS CDS 56189 58405 1 + 0 ID=LTnewLM_100006400.1:CDS:1;Parent=LTnewLM_100006400.1 ### LTnewLM_10 . polypeptide 56189 58405 . + . ID=LTnewLM_100006400.1:pep;Derives_from=LTnewLM_100006400.1;orthologous_to=LmjF.10.0130_mRNA;ortholog_cluster=OG0000638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 60019 62361 1 + . ID=LTnewLM_100006500 LTnewLM_10 AUGUSTUS mRNA 60019 62361 1 + . ID=LTnewLM_100006500.1;Parent=LTnewLM_100006500 LTnewLM_10 AUGUSTUS CDS 60019 62361 1 + 0 ID=LTnewLM_100006500.1:CDS:1;Parent=LTnewLM_100006500.1 ### LTnewLM_10 . polypeptide 60019 62361 . + . ID=LTnewLM_100006500.1:pep;Derives_from=LTnewLM_100006500.1;orthologous_to=LmjF.10.0140_mRNA;ortholog_cluster=OG0000639;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_10 Pfam protein_match 60967 61539 . + . Parent=LTnewLM_100006500.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_10 Pfam protein_match 61762 62061 . + . Parent=LTnewLM_100006500.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_10 AUGUSTUS gene 65895 67013 1 + . ID=LTnewLM_100006600 LTnewLM_10 AUGUSTUS mRNA 65895 67013 1 + . ID=LTnewLM_100006600.1;Parent=LTnewLM_100006600 LTnewLM_10 AUGUSTUS CDS 65895 67013 1 + 0 ID=LTnewLM_100006600.1:CDS:1;Parent=LTnewLM_100006600.1 ### LTnewLM_10 . polypeptide 65895 67013 . + . ID=LTnewLM_100006600.1:pep;Derives_from=LTnewLM_100006600.1;orthologous_to=LmjF.10.0150_mRNA;ortholog_cluster=OG0000640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 71048 72032 . + . ID=LTnewLM_100006700.1:pep;Derives_from=LTnewLM_100006700.1;orthologous_to=LTnewLM_100006700.2,LmjF.10.0160_mRNA;ortholog_cluster=OG0000307;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 71048 73168 1.74 + . ID=LTnewLM_100006700 LTnewLM_10 AUGUSTUS mRNA 71048 72032 0.74 + . ID=LTnewLM_100006700.1;Parent=LTnewLM_100006700 LTnewLM_10 AUGUSTUS CDS 71048 71970 0.81 + 0 ID=LTnewLM_100006700.1:CDS:1;Parent=LTnewLM_100006700.1 LTnewLM_10 AUGUSTUS CDS 72026 72032 0.92 + 1 ID=LTnewLM_100006700.1:CDS:2;Parent=LTnewLM_100006700.1 LTnewLM_10 AUGUSTUS mRNA 71048 73168 1 + . ID=LTnewLM_100006700.2;Parent=LTnewLM_100006700 LTnewLM_10 AUGUSTUS CDS 71048 73168 1 + 0 ID=LTnewLM_100006700.2:CDS:1;Parent=LTnewLM_100006700.2 ### LTnewLM_10 . polypeptide 71048 73168 . + . ID=LTnewLM_100006700.2:pep;Derives_from=LTnewLM_100006700.2;orthologous_to=LTnewLM_100006700.1,LmjF.10.0160_mRNA;ortholog_cluster=OG0000307;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 76843 78924 1 + . ID=LTnewLM_100006800 LTnewLM_10 AUGUSTUS mRNA 76843 78924 1 + . ID=LTnewLM_100006800.1;Parent=LTnewLM_100006800 LTnewLM_10 AUGUSTUS CDS 76843 78924 1 + 0 ID=LTnewLM_100006800.1:CDS:1;Parent=LTnewLM_100006800.1 ### LTnewLM_10 . polypeptide 76843 78924 . + . ID=LTnewLM_100006800.1:pep;Derives_from=LTnewLM_100006800.1;orthologous_to=LmjF.10.0170_mRNA;ortholog_cluster=OG0000641;product=term%3DGDA1/CD39 (nucleoside phosphatase) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01150;Ontology_term=GO:0016787 LTnewLM_10 Pfam protein_match 77452 78909 . + . Parent=LTnewLM_100006800.1:pep;Name=PF01150;signature_desc=GDA1/CD39 (nucleoside phosphatase) family;Ontology_term=GO:0016787 ### LTnewLM_10 . pseudogene 80705 81468 1.29e+03 + . ID=LTnewLM_100006900:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.10.0180:mRNA 3 256;original_prot_length=258 LTnewLM_10 . pseudogenic_transcript 80705 81468 . + . ID=LTnewLM_100006900.1;Parent=LTnewLM_100006900:pseudogene LTnewLM_10 . pseudogenic_exon 80705 80737 . + . ID=LTnewLM_100006900.1:pseudogenic_exon:1;Parent=LTnewLM_100006900.1 LTnewLM_10 . pseudogenic_exon 80740 81468 . + . ID=LTnewLM_100006900.1:pseudogenic_exon:2;Parent=LTnewLM_100006900.1 ### LTnewLM_10 . polypeptide 80705 81468 . + . ID=LTnewLM_100006900.1:pep;Derives_from=LTnewLM_100006900.1;orthologous_to=LmjF.10.0180_mRNA;ortholog_cluster=OG0007418;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 80921 81094 . + . Parent=LTnewLM_100006900.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 81062 81232 . + . Parent=LTnewLM_100006900.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_10 . pseudogene 82676 83233 . + . ID=LTnewLM_100007000:pseudogene;coverage=0.958;sequence_ID=0.847;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0185_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 82676 83233 . + . ID=LTnewLM_100007000.1;Parent=LTnewLM_100007000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 82676 83233 . + . ID=LTnewLM_100007000.1:pseudogenic_exon:1;Parent=LTnewLM_100007000.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 82676 83233 . + . ID=LTnewLM_100007000.1:pep;Derives_from=LTnewLM_100007000.1;orthologous_to=LmjF.10.0185_mRNA;ortholog_cluster=OG0007419;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 83599 85554 1 + . ID=LTnewLM_100007100 LTnewLM_10 AUGUSTUS mRNA 83599 85554 1 + . ID=LTnewLM_100007100.1;Parent=LTnewLM_100007100 LTnewLM_10 AUGUSTUS CDS 83599 85554 1 + 0 ID=LTnewLM_100007100.1:CDS:1;Parent=LTnewLM_100007100.1 ### LTnewLM_10 . polypeptide 83599 85554 . + . ID=LTnewLM_100007100.1:pep;Derives_from=LTnewLM_100007100.1;orthologous_to=LmjF.10.0190_mRNA;ortholog_cluster=OG0000642;product=term%3DPDZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17820 LTnewLM_10 Pfam protein_match 85348 85509 . + . Parent=LTnewLM_100007100.1:pep;Name=PF17820;signature_desc=PDZ domain ### LTnewLM_10 AUGUSTUS gene 86561 87226 1 + . ID=LTnewLM_100007200 LTnewLM_10 AUGUSTUS mRNA 86561 87226 1 + . ID=LTnewLM_100007200.1;Parent=LTnewLM_100007200 LTnewLM_10 AUGUSTUS CDS 86561 87226 1 + 0 ID=LTnewLM_100007200.1:CDS:1;Parent=LTnewLM_100007200.1 ### LTnewLM_10 . polypeptide 86561 87226 . + . ID=LTnewLM_100007200.1:pep;Derives_from=LTnewLM_100007200.1;orthologous_to=LmjF.10.0195_mRNA;ortholog_cluster=OG0000643;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_10 Pfam protein_match 86837 86869 . + . Parent=LTnewLM_100007200.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_10 Pfam protein_match 86879 86929 . + . Parent=LTnewLM_100007200.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_10 Pfam protein_match 86951 87010 . + . Parent=LTnewLM_100007200.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_10 Pfam protein_match 87020 87082 . + . Parent=LTnewLM_100007200.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_10 AUGUSTUS gene 88576 89799 1 + . ID=LTnewLM_100007300 LTnewLM_10 AUGUSTUS mRNA 88576 89799 1 + . ID=LTnewLM_100007300.1;Parent=LTnewLM_100007300 LTnewLM_10 AUGUSTUS CDS 88576 89799 1 + 0 ID=LTnewLM_100007300.1:CDS:1;Parent=LTnewLM_100007300.1 ### LTnewLM_10 . polypeptide 88576 89799 . + . ID=LTnewLM_100007300.1:pep;Derives_from=LTnewLM_100007300.1;orthologous_to=LmjF.10.0200_mRNA;ortholog_cluster=OG0000644;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family/Phosphotransferase enzyme family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293|Pfam:PF01636;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_10 Pfam protein_match 88642 89529 . + . Parent=LTnewLM_100007300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_10 Pfam protein_match 88648 89259 . + . Parent=LTnewLM_100007300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_10 Pfam protein_match 88792 89127 . + . Parent=LTnewLM_100007300.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 LTnewLM_10 Pfam protein_match 89005 89115 . + . Parent=LTnewLM_100007300.1:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family ### LTnewLM_10 AUGUSTUS gene 92586 92969 0.73 + . ID=LTnewLM_100007400 LTnewLM_10 AUGUSTUS mRNA 92586 92969 0.73 + . ID=LTnewLM_100007400.1;Parent=LTnewLM_100007400 LTnewLM_10 AUGUSTUS CDS 92586 92969 0.73 + 0 ID=LTnewLM_100007400.1:CDS:1;Parent=LTnewLM_100007400.1 ### LTnewLM_10 . polypeptide 92586 92969 . + . ID=LTnewLM_100007400.1:pep;Derives_from=LTnewLM_100007400.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 93046 93705 0.52 + . ID=LTnewLM_100007500 LTnewLM_10 AUGUSTUS mRNA 93046 93705 0.52 + . ID=LTnewLM_100007500.1;Parent=LTnewLM_100007500 LTnewLM_10 AUGUSTUS CDS 93046 93204 0.58 + 0 ID=LTnewLM_100007500.1:CDS:1;Parent=LTnewLM_100007500.1 LTnewLM_10 AUGUSTUS CDS 93514 93705 0.65 + 0 ID=LTnewLM_100007500.1:CDS:2;Parent=LTnewLM_100007500.1 ### LTnewLM_10 . polypeptide 93046 93705 . + . ID=LTnewLM_100007500.1:pep;Derives_from=LTnewLM_100007500.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 96097 97518 1 + . ID=LTnewLM_100007600 LTnewLM_10 AUGUSTUS mRNA 96097 97518 1 + . ID=LTnewLM_100007600.1;Parent=LTnewLM_100007600 LTnewLM_10 AUGUSTUS CDS 96097 97518 1 + 0 ID=LTnewLM_100007600.1:CDS:1;Parent=LTnewLM_100007600.1 ### LTnewLM_10 . polypeptide 96097 97518 . + . ID=LTnewLM_100007600.1:pep;Derives_from=LTnewLM_100007600.1;orthologous_to=LmjF.10.0210_mRNA;ortholog_cluster=OG0000645;product=term%3DNOP5NT (NUC127) domain/snoRNA binding domain%2C fibrillarin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08156|Pfam:PF01798 LTnewLM_10 Pfam protein_match 96112 96303 . + . Parent=LTnewLM_100007600.1:pep;Name=PF08156;signature_desc=NOP5NT (NUC127) domain LTnewLM_10 Pfam protein_match 96634 97344 . + . Parent=LTnewLM_100007600.1:pep;Name=PF01798;signature_desc=snoRNA binding domain%2C fibrillarin ### LTnewLM_10 AUGUSTUS gene 98744 100891 1 + . ID=LTnewLM_100007700 LTnewLM_10 AUGUSTUS mRNA 98744 100891 1 + . ID=LTnewLM_100007700.1;Parent=LTnewLM_100007700 LTnewLM_10 AUGUSTUS CDS 98744 100891 1 + 0 ID=LTnewLM_100007700.1:CDS:1;Parent=LTnewLM_100007700.1 ### LTnewLM_10 . polypeptide 98744 100891 . + . ID=LTnewLM_100007700.1:pep;Derives_from=LTnewLM_100007700.1;orthologous_to=LmjF.10.0218_mRNA;ortholog_cluster=OG0000646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 101650 102486 1 + . ID=LTnewLM_100007800 LTnewLM_10 AUGUSTUS mRNA 101650 102486 1 + . ID=LTnewLM_100007800.1;Parent=LTnewLM_100007800 LTnewLM_10 AUGUSTUS CDS 101650 102486 1 + 0 ID=LTnewLM_100007800.1:CDS:1;Parent=LTnewLM_100007800.1 ### LTnewLM_10 . polypeptide 101650 102486 . + . ID=LTnewLM_100007800.1:pep;Derives_from=LTnewLM_100007800.1;orthologous_to=LmjF.10.0219_mRNA;ortholog_cluster=OG0000647;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 105917 107389 1 + . ID=LTnewLM_100007900 LTnewLM_10 AUGUSTUS mRNA 105917 107389 1 + . ID=LTnewLM_100007900.1;Parent=LTnewLM_100007900 LTnewLM_10 AUGUSTUS CDS 105917 107389 1 + 0 ID=LTnewLM_100007900.1:CDS:1;Parent=LTnewLM_100007900.1 ### LTnewLM_10 . polypeptide 105917 107389 . + . ID=LTnewLM_100007900.1:pep;Derives_from=LTnewLM_100007900.1;orthologous_to=LmjF.10.0220_mRNA;ortholog_cluster=OG0000648;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_10 Pfam protein_match 106319 106753 . + . Parent=LTnewLM_100007900.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein LTnewLM_10 Pfam protein_match 106862 107362 . + . Parent=LTnewLM_100007900.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_10 AUGUSTUS gene 110408 111664 1 + . ID=LTnewLM_100008000 LTnewLM_10 AUGUSTUS mRNA 110408 111664 1 + . ID=LTnewLM_100008000.1;Parent=LTnewLM_100008000 LTnewLM_10 AUGUSTUS CDS 110408 111664 1 + 0 ID=LTnewLM_100008000.1:CDS:1;Parent=LTnewLM_100008000.1 ### LTnewLM_10 . polypeptide 110408 111664 . + . ID=LTnewLM_100008000.1:pep;Derives_from=LTnewLM_100008000.1;orthologous_to=LmjF.10.0230_mRNA;ortholog_cluster=OG0000649;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_10 Pfam protein_match 110624 111046 . + . Parent=LTnewLM_100008000.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein LTnewLM_10 Pfam protein_match 111128 111646 . + . Parent=LTnewLM_100008000.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_10 . pseudogene 113578 115751 3.64e+03 + . ID=LTnewLM_100008100:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.10.0240:mRNA 3 726;original_prot_length=727 LTnewLM_10 . pseudogenic_transcript 113578 115751 . + . ID=LTnewLM_100008100.1;Parent=LTnewLM_100008100:pseudogene LTnewLM_10 . pseudogenic_exon 113578 114702 . + . ID=LTnewLM_100008100.1:pseudogenic_exon:1;Parent=LTnewLM_100008100.1 LTnewLM_10 . pseudogenic_exon 114705 115751 . + . ID=LTnewLM_100008100.1:pseudogenic_exon:2;Parent=LTnewLM_100008100.1 ### LTnewLM_10 . polypeptide 113578 115751 . + . ID=LTnewLM_100008100.1:pep;Derives_from=LTnewLM_100008100.1;orthologous_to=LmjF.10.0240_mRNA;ortholog_cluster=OG0007420;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 116772 117626 1 + . ID=LTnewLM_100008200 LTnewLM_10 AUGUSTUS mRNA 116772 117626 1 + . ID=LTnewLM_100008200.1;Parent=LTnewLM_100008200 LTnewLM_10 AUGUSTUS CDS 116772 117626 1 + 0 ID=LTnewLM_100008200.1:CDS:1;Parent=LTnewLM_100008200.1 ### LTnewLM_10 . polypeptide 116772 117626 . + . ID=LTnewLM_100008200.1:pep;Derives_from=LTnewLM_100008200.1;orthologous_to=LmjF.10.0250_mRNA;ortholog_cluster=OG0000650;product=term%3DPterin 4 alpha carbinolamine dehydratase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01329;Ontology_term=GO:0008124,GO:0006729 LTnewLM_10 Pfam protein_match 117162 117362 . + . Parent=LTnewLM_100008200.1:pep;Name=PF01329;signature_desc=Pterin 4 alpha carbinolamine dehydratase;Ontology_term=GO:0008124,GO:0006729 ### LTnewLM_10 AUGUSTUS gene 118382 118771 1 + . ID=LTnewLM_100008300 LTnewLM_10 AUGUSTUS mRNA 118382 118771 1 + . ID=LTnewLM_100008300.1;Parent=LTnewLM_100008300 LTnewLM_10 AUGUSTUS CDS 118382 118771 1 + 0 ID=LTnewLM_100008300.1:CDS:1;Parent=LTnewLM_100008300.1 ### LTnewLM_10 . polypeptide 118382 118771 . + . ID=LTnewLM_100008300.1:pep;Derives_from=LTnewLM_100008300.1;orthologous_to=LmjF.10.0260_mRNA;ortholog_cluster=OG0000651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 Liftoff gene 120627 123563 . + . ID=LTnewLM_100008400;coverage=1.0;sequence_ID=0.935;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.0270_0 LTnewLM_10 Liftoff mRNA 120627 123563 . + . ID=LTnewLM_100008400.1;Parent=LTnewLM_100008400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 Liftoff CDS 120627 123563 . + 0 ID=LTnewLM_100008400.1:CDS:1;Parent=LTnewLM_100008400.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 120627 123563 . + . ID=LTnewLM_100008400.1:pep;Derives_from=LTnewLM_100008400.1;orthologous_to=LmjF.10.0270_mRNA;ortholog_cluster=OG0000652;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 124536 131576 1 + . ID=LTnewLM_100008500 LTnewLM_10 AUGUSTUS mRNA 124536 131576 1 + . ID=LTnewLM_100008500.1;Parent=LTnewLM_100008500 LTnewLM_10 AUGUSTUS CDS 124536 131576 1 + 0 ID=LTnewLM_100008500.1:CDS:1;Parent=LTnewLM_100008500.1 ### LTnewLM_10 . polypeptide 124536 131576 . + . ID=LTnewLM_100008500.1:pep;Derives_from=LTnewLM_100008500.1;orthologous_to=LmjF.10.0280_mRNA;ortholog_cluster=OG0000653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 132686 133993 1 + . ID=LTnewLM_100008600 LTnewLM_10 AUGUSTUS mRNA 132686 133993 1 + . ID=LTnewLM_100008600.1;Parent=LTnewLM_100008600 LTnewLM_10 AUGUSTUS CDS 132686 133993 1 + 0 ID=LTnewLM_100008600.1:CDS:1;Parent=LTnewLM_100008600.1 ### LTnewLM_10 . polypeptide 132686 133993 . + . ID=LTnewLM_100008600.1:pep;Derives_from=LTnewLM_100008600.1;orthologous_to=LmjF.10.0290_mRNA;ortholog_cluster=OG0000654;product=term%3DIsocitrate/isopropylmalate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00180;Ontology_term=GO:0016616,GO:0055114 LTnewLM_10 Pfam protein_match 132779 133957 . + . Parent=LTnewLM_100008600.1:pep;Name=PF00180;signature_desc=Isocitrate/isopropylmalate dehydrogenase;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_10 AUGUSTUS gene 137227 139524 1 + . ID=LTnewLM_100008700 LTnewLM_10 AUGUSTUS mRNA 137227 139524 1 + . ID=LTnewLM_100008700.1;Parent=LTnewLM_100008700 LTnewLM_10 AUGUSTUS CDS 137227 139524 1 + 0 ID=LTnewLM_100008700.1:CDS:1;Parent=LTnewLM_100008700.1 ### LTnewLM_10 . polypeptide 137227 139524 . + . ID=LTnewLM_100008700.1:pep;Derives_from=LTnewLM_100008700.1;orthologous_to=LmjF.10.0300_mRNA;ortholog_cluster=OG0000655;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 141561 144662 1 + . ID=LTnewLM_100008800 LTnewLM_10 AUGUSTUS mRNA 141561 144662 1 + . ID=LTnewLM_100008800.1;Parent=LTnewLM_100008800 LTnewLM_10 AUGUSTUS CDS 141561 144662 1 + 0 ID=LTnewLM_100008800.1:CDS:1;Parent=LTnewLM_100008800.1 ### LTnewLM_10 . polypeptide 141561 144662 . + . ID=LTnewLM_100008800.1:pep;Derives_from=LTnewLM_100008800.1;orthologous_to=LmjF.10.0310_mRNA;ortholog_cluster=OG0000656;product=term%3DSec23/Sec24 trunk domain/Sec23/Sec24 beta-sandwich domain/Sec23/Sec24 helical domain/Gelsolin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04811|Pfam:PF08033|Pfam:PF04815|Pfam:PF00626;Ontology_term=GO:0030127,GO:0006886,GO:0006888 LTnewLM_10 Pfam protein_match 142545 142964 . + . Parent=LTnewLM_100008800.1:pep;Name=PF04811;signature_desc=Sec23/Sec24 trunk domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_10 Pfam protein_match 143010 143372 . + . Parent=LTnewLM_100008800.1:pep;Name=PF04811;signature_desc=Sec23/Sec24 trunk domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_10 Pfam protein_match 143493 143822 . + . Parent=LTnewLM_100008800.1:pep;Name=PF08033;signature_desc=Sec23/Sec24 beta-sandwich domain LTnewLM_10 Pfam protein_match 143874 144173 . + . Parent=LTnewLM_100008800.1:pep;Name=PF04815;signature_desc=Sec23/Sec24 helical domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_10 Pfam protein_match 144231 144467 . + . Parent=LTnewLM_100008800.1:pep;Name=PF00626;signature_desc=Gelsolin repeat ### LTnewLM_10 AUGUSTUS gene 146307 152180 1 + . ID=LTnewLM_100008900 LTnewLM_10 AUGUSTUS mRNA 146307 152180 1 + . ID=LTnewLM_100008900.1;Parent=LTnewLM_100008900 LTnewLM_10 AUGUSTUS CDS 146307 152180 1 + 0 ID=LTnewLM_100008900.1:CDS:1;Parent=LTnewLM_100008900.1 ### LTnewLM_10 . polypeptide 146307 152180 . + . ID=LTnewLM_100008900.1:pep;Derives_from=LTnewLM_100008900.1;orthologous_to=LmjF.10.0320_mRNA;ortholog_cluster=OG0000657;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 154218 154588 . + . ID=LTnewLM_100009000.1:pep;Derives_from=LTnewLM_100009000.1;orthologous_to=LTnewLM_100009000.2,LmjF.10.0330_mRNA;ortholog_cluster=OG0000308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 154218 155696 2 + . ID=LTnewLM_100009000 LTnewLM_10 AUGUSTUS mRNA 154218 154588 1 + . ID=LTnewLM_100009000.1;Parent=LTnewLM_100009000 LTnewLM_10 AUGUSTUS CDS 154218 154518 1 + 0 ID=LTnewLM_100009000.1:CDS:1;Parent=LTnewLM_100009000.1 LTnewLM_10 AUGUSTUS CDS 154584 154588 1 + 2 ID=LTnewLM_100009000.1:CDS:2;Parent=LTnewLM_100009000.1 LTnewLM_10 AUGUSTUS mRNA 154218 155696 1 + . ID=LTnewLM_100009000.2;Parent=LTnewLM_100009000 LTnewLM_10 AUGUSTUS CDS 154218 155696 1 + 0 ID=LTnewLM_100009000.2:CDS:1;Parent=LTnewLM_100009000.2 ### LTnewLM_10 . polypeptide 154218 155696 . + . ID=LTnewLM_100009000.2:pep;Derives_from=LTnewLM_100009000.2;orthologous_to=LTnewLM_100009000.1,LmjF.10.0330_mRNA;ortholog_cluster=OG0000308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . pseudogene 157121 159480 . + . ID=LTnewLM_100009100:pseudogene;coverage=0.981;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0360_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 157121 159480 . + . ID=LTnewLM_100009100.1;Parent=LTnewLM_100009100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 157121 159480 . + . ID=LTnewLM_100009100.1:pseudogenic_exon:1;Parent=LTnewLM_100009100.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 157121 159480 . + . ID=LTnewLM_100009100.1:pep;Derives_from=LTnewLM_100009100.1;orthologous_to=LTnewLM_100009500.1;ortholog_cluster=OG0007421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 163644 165704 1 + . ID=LTnewLM_100009200 LTnewLM_10 AUGUSTUS mRNA 163644 165704 1 + . ID=LTnewLM_100009200.1;Parent=LTnewLM_100009200 LTnewLM_10 AUGUSTUS CDS 163644 165704 1 + 0 ID=LTnewLM_100009200.1:CDS:1;Parent=LTnewLM_100009200.1 ### LTnewLM_10 . polypeptide 163644 165704 . + . ID=LTnewLM_100009200.1:pep;Derives_from=LTnewLM_100009200.1;orthologous_to=LTnewLM_100009300.1,LTnewLM_100009400.1,LmjF.10.0360_mRNA,LmjF.10.0370_mRNA,LmjF.10.0380_mRNA,LmjF.10.0385_mRNA,LmjF.10.0390_mRNA;ortholog_cluster=OG0000022;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 163875 165596 . + . Parent=LTnewLM_100009200.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 AUGUSTUS gene 168925 171027 1 + . ID=LTnewLM_100009300 LTnewLM_10 AUGUSTUS mRNA 168925 171027 1 + . ID=LTnewLM_100009300.1;Parent=LTnewLM_100009300 LTnewLM_10 AUGUSTUS CDS 168925 171027 1 + 0 ID=LTnewLM_100009300.1:CDS:1;Parent=LTnewLM_100009300.1 ### LTnewLM_10 . polypeptide 168925 171027 . + . ID=LTnewLM_100009300.1:pep;Derives_from=LTnewLM_100009300.1;orthologous_to=LTnewLM_100009200.1,LTnewLM_100009400.1,LmjF.10.0360_mRNA,LmjF.10.0370_mRNA,LmjF.10.0380_mRNA,LmjF.10.0385_mRNA,LmjF.10.0390_mRNA;ortholog_cluster=OG0000022;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 169150 170886 . + . Parent=LTnewLM_100009300.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 AUGUSTUS gene 176729 178843 1 + . ID=LTnewLM_100009400 LTnewLM_10 AUGUSTUS mRNA 176729 178843 1 + . ID=LTnewLM_100009400.1;Parent=LTnewLM_100009400 LTnewLM_10 AUGUSTUS CDS 176729 178843 1 + 0 ID=LTnewLM_100009400.1:CDS:1;Parent=LTnewLM_100009400.1 ### LTnewLM_10 . polypeptide 176729 178843 . + . ID=LTnewLM_100009400.1:pep;Derives_from=LTnewLM_100009400.1;orthologous_to=LTnewLM_100009200.1,LTnewLM_100009300.1,LmjF.10.0360_mRNA,LmjF.10.0370_mRNA,LmjF.10.0380_mRNA,LmjF.10.0385_mRNA,LmjF.10.0390_mRNA;ortholog_cluster=OG0000022;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 176954 178690 . + . Parent=LTnewLM_100009400.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 . pseudogene 182705 184892 . + . ID=LTnewLM_100009500:pseudogene;coverage=0.992;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0390_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 182705 184892 . + . ID=LTnewLM_100009500.1;Parent=LTnewLM_100009500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 182705 184892 . + . ID=LTnewLM_100009500.1:pseudogenic_exon:1;Parent=LTnewLM_100009500.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 182705 184892 . + . ID=LTnewLM_100009500.1:pep;Derives_from=LTnewLM_100009500.1;orthologous_to=LTnewLM_100009100.1;ortholog_cluster=OG0007421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 186827 188995 1 + . ID=LTnewLM_100009600 LTnewLM_10 AUGUSTUS mRNA 186827 188995 1 + . ID=LTnewLM_100009600.1;Parent=LTnewLM_100009600 LTnewLM_10 AUGUSTUS CDS 186827 188995 1 + 0 ID=LTnewLM_100009600.1:CDS:1;Parent=LTnewLM_100009600.1 ### LTnewLM_10 . polypeptide 186827 188995 . + . ID=LTnewLM_100009600.1:pep;Derives_from=LTnewLM_100009600.1;orthologous_to=LmjF.10.0400_mRNA;ortholog_cluster=OG0000658;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 187106 188869 . + . Parent=LTnewLM_100009600.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 AUGUSTUS gene 191019 192788 1 + . ID=LTnewLM_100009700 LTnewLM_10 AUGUSTUS mRNA 191019 192788 1 + . ID=LTnewLM_100009700.1;Parent=LTnewLM_100009700 LTnewLM_10 AUGUSTUS CDS 191019 192788 1 + 0 ID=LTnewLM_100009700.1:CDS:1;Parent=LTnewLM_100009700.1 ### LTnewLM_10 . polypeptide 191019 192788 . + . ID=LTnewLM_100009700.1:pep;Derives_from=LTnewLM_100009700.1;orthologous_to=LmjF.10.0420_mRNA;ortholog_cluster=OG0000659;product=term%3DDak1 domain/DAK2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02733|Pfam:PF02734;Ontology_term=GO:0006071,GO:0004371 LTnewLM_10 Pfam protein_match 191082 192005 . + . Parent=LTnewLM_100009700.1:pep;Name=PF02733;signature_desc=Dak1 domain;Ontology_term=GO:0004371,GO:0006071 LTnewLM_10 Pfam protein_match 192249 192770 . + . Parent=LTnewLM_100009700.1:pep;Name=PF02734;signature_desc=DAK2 domain;Ontology_term=GO:0004371,GO:0006071 ### LTnewLM_10 AUGUSTUS gene 194732 196175 0.6 + . ID=LTnewLM_100009800 LTnewLM_10 AUGUSTUS mRNA 194732 196175 0.6 + . ID=LTnewLM_100009800.1;Parent=LTnewLM_100009800 LTnewLM_10 AUGUSTUS CDS 194732 194785 0.88 + 0 ID=LTnewLM_100009800.1:CDS:1;Parent=LTnewLM_100009800.1 LTnewLM_10 AUGUSTUS CDS 194958 196175 0.65 + 0 ID=LTnewLM_100009800.1:CDS:2;Parent=LTnewLM_100009800.1 ### LTnewLM_10 . polypeptide 194732 196175 . + . ID=LTnewLM_100009800.1:pep;Derives_from=LTnewLM_100009800.1;product=term%3Dhypothetical protein ### LTnewLM_10 . pseudogene 197710 198370 . + . ID=LTnewLM_100009900:pseudogene;coverage=0.996;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0430_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 197710 198370 . + . ID=LTnewLM_100009900.1;Parent=LTnewLM_100009900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 197710 198370 . + . ID=LTnewLM_100009900.1:pseudogenic_exon:1;Parent=LTnewLM_100009900.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 197710 198370 . + . ID=LTnewLM_100009900.1:pep;Derives_from=LTnewLM_100009900.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 201605 202216 1 + . ID=LTnewLM_100010000 LTnewLM_10 AUGUSTUS mRNA 201605 202216 1 + . ID=LTnewLM_100010000.1;Parent=LTnewLM_100010000 LTnewLM_10 AUGUSTUS CDS 201605 202216 1 + 0 ID=LTnewLM_100010000.1:CDS:1;Parent=LTnewLM_100010000.1 ### LTnewLM_10 . polypeptide 201605 202216 . + . ID=LTnewLM_100010000.1:pep;Derives_from=LTnewLM_100010000.1;orthologous_to=LmjF.10.0440_mRNA;ortholog_cluster=OG0000660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 204736 205866 0.93 + . ID=LTnewLM_100010100 LTnewLM_10 AUGUSTUS mRNA 204736 205866 0.93 + . ID=LTnewLM_100010100.1;Parent=LTnewLM_100010100 LTnewLM_10 AUGUSTUS CDS 204736 205003 0.94 + 0 ID=LTnewLM_100010100.1:CDS:1;Parent=LTnewLM_100010100.1 LTnewLM_10 AUGUSTUS CDS 205247 205866 0.94 + 2 ID=LTnewLM_100010100.1:CDS:2;Parent=LTnewLM_100010100.1 ### LTnewLM_10 . polypeptide 204736 205866 . + . ID=LTnewLM_100010100.1:pep;Derives_from=LTnewLM_100010100.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 206478 207168 0.91 + . ID=LTnewLM_100010200 LTnewLM_10 AUGUSTUS mRNA 206478 207168 0.91 + . ID=LTnewLM_100010200.1;Parent=LTnewLM_100010200 LTnewLM_10 AUGUSTUS CDS 206478 206996 0.99 + 0 ID=LTnewLM_100010200.1:CDS:1;Parent=LTnewLM_100010200.1 LTnewLM_10 AUGUSTUS CDS 207043 207168 0.91 + 0 ID=LTnewLM_100010200.1:CDS:2;Parent=LTnewLM_100010200.1 ### LTnewLM_10 . polypeptide 206478 207168 . + . ID=LTnewLM_100010200.1:pep;Derives_from=LTnewLM_100010200.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 208140 208391 1 + . ID=LTnewLM_100010300 LTnewLM_10 AUGUSTUS mRNA 208140 208391 1 + . ID=LTnewLM_100010300.1;Parent=LTnewLM_100010300 LTnewLM_10 AUGUSTUS CDS 208140 208391 1 + 0 ID=LTnewLM_100010300.1:CDS:1;Parent=LTnewLM_100010300.1 ### LTnewLM_10 . polypeptide 208140 208391 . + . ID=LTnewLM_100010300.1:pep;Derives_from=LTnewLM_100010300.1;orthologous_to=LmjF.10.0450_mRNA;ortholog_cluster=OG0000661;product=term%3D4F5 protein related disordered region/Zinc-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04419|Pfam:PF12907 LTnewLM_10 Pfam protein_match 208146 208256 . + . Parent=LTnewLM_100010300.1:pep;Name=PF04419;signature_desc=4F5 protein related disordered region LTnewLM_10 Pfam protein_match 208266 208376 . + . Parent=LTnewLM_100010300.1:pep;Name=PF12907;signature_desc=Zinc-binding ### LTnewLM_10 . pseudogene 211476 213279 . + . ID=LTnewLM_100010400:pseudogene;coverage=0.988;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0460_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 211476 213279 . + . ID=LTnewLM_100010400.1;Parent=LTnewLM_100010400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 211476 213279 . + . ID=LTnewLM_100010400.1:pseudogenic_exon:1;Parent=LTnewLM_100010400.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 211476 213279 . + . ID=LTnewLM_100010400.1:pep;Derives_from=LTnewLM_100010400.1;orthologous_to=LTnewLM_100010600.1;ortholog_cluster=OG0007422;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 214530 216344 1 + . ID=LTnewLM_100010500 LTnewLM_10 AUGUSTUS mRNA 214530 216344 1 + . ID=LTnewLM_100010500.1;Parent=LTnewLM_100010500 LTnewLM_10 AUGUSTUS CDS 214530 216344 1 + 0 ID=LTnewLM_100010500.1:CDS:1;Parent=LTnewLM_100010500.1 ### LTnewLM_10 . polypeptide 214530 216344 . + . ID=LTnewLM_100010500.1:pep;Derives_from=LTnewLM_100010500.1;orthologous_to=LTnewLM_100010700.1,LTnewLM_100010800.1,LTnewLM_100010900.1,LmjF.10.0460_mRNA,LmjF.10.0465_mRNA,LmjF.10.0470_mRNA,LmjF.10.0480_mRNA;ortholog_cluster=OG0000023;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_10 Pfam protein_match 214674 216242 . + . Parent=LTnewLM_100010500.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_10 . pseudogene 217595 219411 . + . ID=LTnewLM_100010600:pseudogene;coverage=0.994;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0465_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 217595 219411 . + . ID=LTnewLM_100010600.1;Parent=LTnewLM_100010600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 217595 219411 . + . ID=LTnewLM_100010600.1:pseudogenic_exon:1;Parent=LTnewLM_100010600.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 217595 219411 . + . ID=LTnewLM_100010600.1:pep;Derives_from=LTnewLM_100010600.1;orthologous_to=LTnewLM_100010400.1;ortholog_cluster=OG0007422;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 220663 222480 1 + . ID=LTnewLM_100010700 LTnewLM_10 AUGUSTUS mRNA 220663 222480 1 + . ID=LTnewLM_100010700.1;Parent=LTnewLM_100010700 LTnewLM_10 AUGUSTUS CDS 220663 222480 1 + 0 ID=LTnewLM_100010700.1:CDS:1;Parent=LTnewLM_100010700.1 ### LTnewLM_10 . polypeptide 220663 222480 . + . ID=LTnewLM_100010700.1:pep;Derives_from=LTnewLM_100010700.1;orthologous_to=LTnewLM_100010500.1,LTnewLM_100010800.1,LTnewLM_100010900.1,LmjF.10.0460_mRNA,LmjF.10.0465_mRNA,LmjF.10.0470_mRNA,LmjF.10.0480_mRNA;ortholog_cluster=OG0000023;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_10 Pfam protein_match 220810 222378 . + . Parent=LTnewLM_100010700.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_10 AUGUSTUS gene 223729 225663 1 + . ID=LTnewLM_100010800 LTnewLM_10 AUGUSTUS mRNA 223729 225663 1 + . ID=LTnewLM_100010800.1;Parent=LTnewLM_100010800 LTnewLM_10 AUGUSTUS CDS 223729 225663 1 + 0 ID=LTnewLM_100010800.1:CDS:1;Parent=LTnewLM_100010800.1 ### LTnewLM_10 . polypeptide 223729 225663 . + . ID=LTnewLM_100010800.1:pep;Derives_from=LTnewLM_100010800.1;orthologous_to=LTnewLM_100010500.1,LTnewLM_100010700.1,LTnewLM_100010900.1,LmjF.10.0460_mRNA,LmjF.10.0465_mRNA,LmjF.10.0470_mRNA,LmjF.10.0480_mRNA;ortholog_cluster=OG0000023;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_10 Pfam protein_match 223873 225438 . + . Parent=LTnewLM_100010800.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_10 AUGUSTUS gene 227656 229457 0.62 + . ID=LTnewLM_100010900 LTnewLM_10 AUGUSTUS mRNA 227656 229457 0.62 + . ID=LTnewLM_100010900.1;Parent=LTnewLM_100010900 LTnewLM_10 AUGUSTUS CDS 227656 228587 0.62 + 0 ID=LTnewLM_100010900.1:CDS:1;Parent=LTnewLM_100010900.1 LTnewLM_10 AUGUSTUS CDS 228635 229457 0.62 + 1 ID=LTnewLM_100010900.1:CDS:2;Parent=LTnewLM_100010900.1 ### LTnewLM_10 . polypeptide 227656 229457 . + . ID=LTnewLM_100010900.1:pep;Derives_from=LTnewLM_100010900.1;orthologous_to=LTnewLM_100010500.1,LTnewLM_100010700.1,LTnewLM_100010800.1,LmjF.10.0460_mRNA,LmjF.10.0465_mRNA,LmjF.10.0470_mRNA,LmjF.10.0480_mRNA;ortholog_cluster=OG0000023;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_10 Pfam protein_match 227791 229308 . + . Parent=LTnewLM_100010900.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_10 . pseudogene 231292 232876 . + . ID=LTnewLM_100011000:pseudogene;coverage=0.752;sequence_ID=0.585;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0483_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 231292 232876 . + . ID=LTnewLM_100011000.1;Parent=LTnewLM_100011000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 231292 232876 . + . ID=LTnewLM_100011000.1:pseudogenic_exon:1;Parent=LTnewLM_100011000.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 231292 232876 . + . ID=LTnewLM_100011000.1:pep;Derives_from=LTnewLM_100011000.1;orthologous_to=LmjF.10.0483_mRNA;ortholog_cluster=OG0007423;product=term%3DPIF1-like helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05970;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_10 Pfam protein_match 232600 232872 . + . Parent=LTnewLM_100011000.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 ### LTnewLM_10 AUGUSTUS gene 233650 234735 1.11 + . ID=LTnewLM_100011100 LTnewLM_10 AUGUSTUS mRNA 233650 234735 0.17 + . ID=LTnewLM_100011100.1;Parent=LTnewLM_100011100 LTnewLM_10 AUGUSTUS CDS 233650 233995 0.18 + 0 ID=LTnewLM_100011100.1:CDS:1;Parent=LTnewLM_100011100.1 LTnewLM_10 AUGUSTUS CDS 234215 234735 0.4 + 2 ID=LTnewLM_100011100.1:CDS:2;Parent=LTnewLM_100011100.1 LTnewLM_10 AUGUSTUS mRNA 234322 234735 0.94 + . ID=LTnewLM_100011100.2;Parent=LTnewLM_100011100 LTnewLM_10 AUGUSTUS CDS 234322 234735 0.94 + 0 ID=LTnewLM_100011100.2:CDS:1;Parent=LTnewLM_100011100.2 ### LTnewLM_10 . polypeptide 233650 234735 . + . ID=LTnewLM_100011100.1:pep;Derives_from=LTnewLM_100011100.1;orthologous_to=LTnewLM_100011100.2,LmjF.10.0485_mRNA;ortholog_cluster=OG0000309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 234322 234735 . + . ID=LTnewLM_100011100.2:pep;Derives_from=LTnewLM_100011100.2;orthologous_to=LTnewLM_100011100.1,LmjF.10.0485_mRNA;ortholog_cluster=OG0000309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 234843 235346 1 + . ID=LTnewLM_100011200 LTnewLM_10 AUGUSTUS mRNA 234843 235346 1 + . ID=LTnewLM_100011200.1;Parent=LTnewLM_100011200 LTnewLM_10 AUGUSTUS CDS 234843 235346 1 + 0 ID=LTnewLM_100011200.1:CDS:1;Parent=LTnewLM_100011200.1 ### LTnewLM_10 . polypeptide 234843 235346 . + . ID=LTnewLM_100011200.1:pep;Derives_from=LTnewLM_100011200.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 236629 236964 1 + . ID=LTnewLM_100011300 LTnewLM_10 AUGUSTUS mRNA 236629 236964 1 + . ID=LTnewLM_100011300.1;Parent=LTnewLM_100011300 LTnewLM_10 AUGUSTUS CDS 236629 236964 1 + 0 ID=LTnewLM_100011300.1:CDS:1;Parent=LTnewLM_100011300.1 ### LTnewLM_10 . polypeptide 236629 236964 . + . ID=LTnewLM_100011300.1:pep;Derives_from=LTnewLM_100011300.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 237339 238739 0.65 + . ID=LTnewLM_100011400 LTnewLM_10 AUGUSTUS mRNA 237339 238739 0.65 + . ID=LTnewLM_100011400.1;Parent=LTnewLM_100011400 LTnewLM_10 AUGUSTUS CDS 237339 237546 0.65 + 0 ID=LTnewLM_100011400.1:CDS:1;Parent=LTnewLM_100011400.1 LTnewLM_10 AUGUSTUS CDS 238717 238739 0.65 + 2 ID=LTnewLM_100011400.1:CDS:2;Parent=LTnewLM_100011400.1 ### LTnewLM_10 . polypeptide 237339 238739 . + . ID=LTnewLM_100011400.1:pep;Derives_from=LTnewLM_100011400.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 240923 242089 1 + . ID=LTnewLM_100011500 LTnewLM_10 AUGUSTUS mRNA 240923 242089 1 + . ID=LTnewLM_100011500.1;Parent=LTnewLM_100011500 LTnewLM_10 AUGUSTUS CDS 240923 242089 1 + 0 ID=LTnewLM_100011500.1:CDS:1;Parent=LTnewLM_100011500.1 ### LTnewLM_10 . polypeptide 240923 242089 . + . ID=LTnewLM_100011500.1:pep;Derives_from=LTnewLM_100011500.1;orthologous_to=LmjF.10.0490_mRNA;ortholog_cluster=OG0000662;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_10 Pfam protein_match 241019 241879 . + . Parent=LTnewLM_100011500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_10 Pfam protein_match 241025 241663 . + . Parent=LTnewLM_100011500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_10 Liftoff gene 247040 267421 . + . ID=LTnewLM_100011600;coverage=0.999;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.0500_0 LTnewLM_10 Liftoff mRNA 247040 267421 . + . ID=LTnewLM_100011600.1;Parent=LTnewLM_100011600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 Liftoff CDS 247040 267421 . + 0 ID=LTnewLM_100011600.1:CDS:1;Parent=LTnewLM_100011600.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 247040 267421 . + . ID=LTnewLM_100011600.1:pep;Derives_from=LTnewLM_100011600.1;orthologous_to=LmjF.10.0500_mRNA;ortholog_cluster=OG0000663;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 269376 270479 1 + . ID=LTnewLM_100011700 LTnewLM_10 AUGUSTUS mRNA 269376 270479 1 + . ID=LTnewLM_100011700.1;Parent=LTnewLM_100011700 LTnewLM_10 AUGUSTUS CDS 269376 270479 1 + 0 ID=LTnewLM_100011700.1:CDS:1;Parent=LTnewLM_100011700.1 ### LTnewLM_10 . polypeptide 269376 270479 . + . ID=LTnewLM_100011700.1:pep;Derives_from=LTnewLM_100011700.1;orthologous_to=LmjF.10.0510_mRNA;ortholog_cluster=OG0000664;product=term%3DNAD-dependent glycerol-3-phosphate dehydrogenase N-terminus/NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus/Bacterial GPD%2C NAD-dependent C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01210|Pfam:PF07479|Pfam:PF20618;Ontology_term=GO:0005737,GO:0004367,GO:0005975,GO:0055114,GO:0051287,GO:0016616,GO:0046168 LTnewLM_10 Pfam protein_match 269433 269903 . + . Parent=LTnewLM_100011700.1:pep;Name=PF01210;signature_desc=NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;Ontology_term=GO:0016616,GO:0051287,GO:0046168,GO:0055114,GO:0005737 LTnewLM_10 Pfam protein_match 269973 270392 . + . Parent=LTnewLM_100011700.1:pep;Name=PF07479;signature_desc=NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus;Ontology_term=GO:0004367,GO:0005975,GO:0055114 LTnewLM_10 Pfam protein_match 270153 270350 . + . Parent=LTnewLM_100011700.1:pep;Name=PF20618;signature_desc=Bacterial GPD%2C NAD-dependent C-terminal ### LTnewLM_10 AUGUSTUS gene 271401 272965 0.53 - . ID=LTnewLM_100011800 LTnewLM_10 AUGUSTUS mRNA 271401 272965 0.53 - . ID=LTnewLM_100011800.1;Parent=LTnewLM_100011800 LTnewLM_10 AUGUSTUS CDS 271401 271464 0.53 - 1 ID=LTnewLM_100011800.1:CDS:1;Parent=LTnewLM_100011800.1 LTnewLM_10 AUGUSTUS CDS 272790 272965 0.97 - 0 ID=LTnewLM_100011800.1:CDS:2;Parent=LTnewLM_100011800.1 ### LTnewLM_10 . polypeptide 271401 272965 . - . ID=LTnewLM_100011800.1:pep;Derives_from=LTnewLM_100011800.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 273121 273453 1 - . ID=LTnewLM_100011900 LTnewLM_10 AUGUSTUS mRNA 273121 273453 1 - . ID=LTnewLM_100011900.1;Parent=LTnewLM_100011900 LTnewLM_10 AUGUSTUS CDS 273121 273453 1 - 0 ID=LTnewLM_100011900.1:CDS:1;Parent=LTnewLM_100011900.1 ### LTnewLM_10 . polypeptide 273121 273453 . - . ID=LTnewLM_100011900.1:pep;Derives_from=LTnewLM_100011900.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 274394 277114 1 - . ID=LTnewLM_100012000 LTnewLM_10 AUGUSTUS mRNA 274394 277114 1 - . ID=LTnewLM_100012000.1;Parent=LTnewLM_100012000 LTnewLM_10 AUGUSTUS CDS 274394 277114 1 - 0 ID=LTnewLM_100012000.1:CDS:1;Parent=LTnewLM_100012000.1 ### LTnewLM_10 . polypeptide 274394 277114 . - . ID=LTnewLM_100012000.1:pep;Derives_from=LTnewLM_100012000.1;orthologous_to=LmjF.10.0520_mRNA;ortholog_cluster=OG0000665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 277932 281498 1 - . ID=LTnewLM_100012100 LTnewLM_10 AUGUSTUS mRNA 277932 281498 1 - . ID=LTnewLM_100012100.1;Parent=LTnewLM_100012100 LTnewLM_10 AUGUSTUS CDS 277932 281498 1 - 0 ID=LTnewLM_100012100.1:CDS:1;Parent=LTnewLM_100012100.1 ### LTnewLM_10 . polypeptide 277932 281498 . - . ID=LTnewLM_100012100.1:pep;Derives_from=LTnewLM_100012100.1;orthologous_to=LmjF.10.0530_mRNA;ortholog_cluster=OG0000666;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 282670 285936 1 - . ID=LTnewLM_100012200 LTnewLM_10 AUGUSTUS mRNA 282670 285936 1 - . ID=LTnewLM_100012200.1;Parent=LTnewLM_100012200 LTnewLM_10 AUGUSTUS CDS 282670 285936 1 - 0 ID=LTnewLM_100012200.1:CDS:1;Parent=LTnewLM_100012200.1 ### LTnewLM_10 . polypeptide 282670 285936 . - . ID=LTnewLM_100012200.1:pep;Derives_from=LTnewLM_100012200.1;orthologous_to=LmjF.10.0540_mRNA;ortholog_cluster=OG0000667;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 286758 288053 1 - . ID=LTnewLM_100012300 LTnewLM_10 AUGUSTUS mRNA 286758 288053 1 - . ID=LTnewLM_100012300.1;Parent=LTnewLM_100012300 LTnewLM_10 AUGUSTUS CDS 286758 288053 1 - 0 ID=LTnewLM_100012300.1:CDS:1;Parent=LTnewLM_100012300.1 ### LTnewLM_10 . polypeptide 286758 288053 . - . ID=LTnewLM_100012300.1:pep;Derives_from=LTnewLM_100012300.1;orthologous_to=LmjF.10.0550_mRNA;ortholog_cluster=OG0000668;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 288662 289777 1 - . ID=LTnewLM_100012400 LTnewLM_10 AUGUSTUS mRNA 288662 289777 1 - . ID=LTnewLM_100012400.1;Parent=LTnewLM_100012400 LTnewLM_10 AUGUSTUS CDS 288662 289777 1 - 0 ID=LTnewLM_100012400.1:CDS:1;Parent=LTnewLM_100012400.1 ### LTnewLM_10 . polypeptide 288662 289777 . - . ID=LTnewLM_100012400.1:pep;Derives_from=LTnewLM_100012400.1;orthologous_to=LmjF.10.0560_mRNA;ortholog_cluster=OG0000669;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_10 Pfam protein_match 288707 289096 . - . Parent=LTnewLM_100012400.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase LTnewLM_10 Pfam protein_match 288860 289189 . - . Parent=LTnewLM_100012400.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_10 Pfam protein_match 289367 289561 . - . Parent=LTnewLM_100012400.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_10 AUGUSTUS gene 290604 292040 1 - . ID=LTnewLM_100012500 LTnewLM_10 AUGUSTUS mRNA 290604 292040 1 - . ID=LTnewLM_100012500.1;Parent=LTnewLM_100012500 LTnewLM_10 AUGUSTUS CDS 290604 292040 1 - 0 ID=LTnewLM_100012500.1:CDS:1;Parent=LTnewLM_100012500.1 ### LTnewLM_10 . polypeptide 290604 292040 . - . ID=LTnewLM_100012500.1:pep;Derives_from=LTnewLM_100012500.1;orthologous_to=LmjF.10.0570_mRNA;ortholog_cluster=OG0000670;product=term%3DZinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_10 Pfam protein_match 290772 291179 . - . Parent=LTnewLM_100012500.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase LTnewLM_10 Pfam protein_match 291000 291272 . - . Parent=LTnewLM_100012500.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 ### LTnewLM_10 AUGUSTUS gene 293028 295340 1 - . ID=LTnewLM_100012600 LTnewLM_10 AUGUSTUS mRNA 293028 295340 1 - . ID=LTnewLM_100012600.1;Parent=LTnewLM_100012600 LTnewLM_10 AUGUSTUS CDS 293028 295340 1 - 0 ID=LTnewLM_100012600.1:CDS:1;Parent=LTnewLM_100012600.1 ### LTnewLM_10 . polypeptide 293028 295340 . - . ID=LTnewLM_100012600.1:pep;Derives_from=LTnewLM_100012600.1;orthologous_to=LmjF.10.0580_mRNA;ortholog_cluster=OG0000671;product=term%3DChromatin assembly factor 1 subunit A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12253 LTnewLM_10 Pfam protein_match 294078 294287 . - . Parent=LTnewLM_100012600.1:pep;Name=PF12253;signature_desc=Chromatin assembly factor 1 subunit A ### LTnewLM_10 AUGUSTUS gene 295700 296503 1 - . ID=LTnewLM_100012700 LTnewLM_10 AUGUSTUS mRNA 295700 296503 1 - . ID=LTnewLM_100012700.1;Parent=LTnewLM_100012700 LTnewLM_10 AUGUSTUS CDS 295700 296503 1 - 0 ID=LTnewLM_100012700.1:CDS:1;Parent=LTnewLM_100012700.1 ### LTnewLM_10 . polypeptide 295700 296503 . - . ID=LTnewLM_100012700.1:pep;Derives_from=LTnewLM_100012700.1;orthologous_to=LmjF.10.0590_mRNA;ortholog_cluster=OG0000672;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 296804 298591 1 - . ID=LTnewLM_100012800 LTnewLM_10 AUGUSTUS mRNA 296804 298591 1 - . ID=LTnewLM_100012800.1;Parent=LTnewLM_100012800 LTnewLM_10 AUGUSTUS CDS 296804 298591 1 - 0 ID=LTnewLM_100012800.1:CDS:1;Parent=LTnewLM_100012800.1 ### LTnewLM_10 . polypeptide 296804 298591 . - . ID=LTnewLM_100012800.1:pep;Derives_from=LTnewLM_100012800.1;orthologous_to=LmjF.10.0600_mRNA;ortholog_cluster=OG0000673;product=term%3DABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03109 LTnewLM_10 Pfam protein_match 297320 298111 . - . Parent=LTnewLM_100012800.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_10 AUGUSTUS gene 304856 306379 1 - . ID=LTnewLM_100012900 LTnewLM_10 AUGUSTUS mRNA 304856 306379 1 - . ID=LTnewLM_100012900.1;Parent=LTnewLM_100012900 LTnewLM_10 AUGUSTUS CDS 304856 306379 1 - 0 ID=LTnewLM_100012900.1:CDS:1;Parent=LTnewLM_100012900.1 ### LTnewLM_10 . polypeptide 304856 306379 . - . ID=LTnewLM_100012900.1:pep;Derives_from=LTnewLM_100012900.1;orthologous_to=LmjF.10.0610_mRNA;ortholog_cluster=OG0000674;product=term%3DDNA/RNA non-specific endonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01223;Ontology_term=GO:0046872,GO:0016787,GO:0003676 LTnewLM_10 Pfam protein_match 305114 306073 . - . Parent=LTnewLM_100012900.1:pep;Name=PF01223;signature_desc=DNA/RNA non-specific endonuclease;Ontology_term=GO:0003676,GO:0016787,GO:0046872 ### LTnewLM_10 AUGUSTUS gene 308164 310434 1 - . ID=LTnewLM_100013000 LTnewLM_10 AUGUSTUS mRNA 308164 310434 1 - . ID=LTnewLM_100013000.1;Parent=LTnewLM_100013000 LTnewLM_10 AUGUSTUS CDS 308164 310434 1 - 0 ID=LTnewLM_100013000.1:CDS:1;Parent=LTnewLM_100013000.1 ### LTnewLM_10 . polypeptide 308164 310434 . - . ID=LTnewLM_100013000.1:pep;Derives_from=LTnewLM_100013000.1;orthologous_to=LmjF.10.0620_mRNA;ortholog_cluster=OG0000675;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 312576 314336 1 - . ID=LTnewLM_100013100 LTnewLM_10 AUGUSTUS mRNA 312576 314336 1 - . ID=LTnewLM_100013100.1;Parent=LTnewLM_100013100 LTnewLM_10 AUGUSTUS CDS 312576 314336 1 - 0 ID=LTnewLM_100013100.1:CDS:1;Parent=LTnewLM_100013100.1 ### LTnewLM_10 . polypeptide 312576 314336 . - . ID=LTnewLM_100013100.1:pep;Derives_from=LTnewLM_100013100.1;orthologous_to=LmjF.10.0630_mRNA;ortholog_cluster=OG0000676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 315930 316661 1 - . ID=LTnewLM_100013200 LTnewLM_10 AUGUSTUS mRNA 315930 316661 1 - . ID=LTnewLM_100013200.1;Parent=LTnewLM_100013200 LTnewLM_10 AUGUSTUS CDS 315930 316661 1 - 0 ID=LTnewLM_100013200.1:CDS:1;Parent=LTnewLM_100013200.1 ### LTnewLM_10 . polypeptide 315930 316661 . - . ID=LTnewLM_100013200.1:pep;Derives_from=LTnewLM_100013200.1;orthologous_to=LmjF.10.0640_mRNA;ortholog_cluster=OG0000677;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 317622 319334 0.96 - . ID=LTnewLM_100013300 LTnewLM_10 AUGUSTUS mRNA 317622 319334 0.96 - . ID=LTnewLM_100013300.1;Parent=LTnewLM_100013300 LTnewLM_10 AUGUSTUS CDS 317622 319334 0.96 - 0 ID=LTnewLM_100013300.1:CDS:1;Parent=LTnewLM_100013300.1 ### LTnewLM_10 . polypeptide 317622 319334 . - . ID=LTnewLM_100013300.1:pep;Derives_from=LTnewLM_100013300.1;orthologous_to=LmjF.10.0650_mRNA;ortholog_cluster=OG0000678;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 320307 326217 1.73 - . ID=LTnewLM_100013400 LTnewLM_10 AUGUSTUS mRNA 320307 326217 0.92 - . ID=LTnewLM_100013400.1;Parent=LTnewLM_100013400 LTnewLM_10 AUGUSTUS CDS 320307 325201 0.96 - 2 ID=LTnewLM_100013400.1:CDS:1;Parent=LTnewLM_100013400.1 LTnewLM_10 AUGUSTUS CDS 325428 326217 0.92 - 0 ID=LTnewLM_100013400.1:CDS:2;Parent=LTnewLM_100013400.1 LTnewLM_10 AUGUSTUS mRNA 325436 326217 0.81 - . ID=LTnewLM_100013400.2;Parent=LTnewLM_100013400 LTnewLM_10 AUGUSTUS CDS 325436 325482 0.81 - 2 ID=LTnewLM_100013400.2:CDS:1;Parent=LTnewLM_100013400.2 LTnewLM_10 AUGUSTUS CDS 325539 326217 0.92 - 0 ID=LTnewLM_100013400.2:CDS:2;Parent=LTnewLM_100013400.2 ### LTnewLM_10 . polypeptide 320307 326217 . - . ID=LTnewLM_100013400.1:pep;Derives_from=LTnewLM_100013400.1;orthologous_to=LTnewLM_100013400.2,LmjF.10.0660_mRNA;ortholog_cluster=OG0000310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 325436 326217 . - . ID=LTnewLM_100013400.2:pep;Derives_from=LTnewLM_100013400.2;orthologous_to=LTnewLM_100013400.1,LmjF.10.0660_mRNA;ortholog_cluster=OG0000310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 328822 329946 1 - . ID=LTnewLM_100013500 LTnewLM_10 AUGUSTUS mRNA 328822 329946 1 - . ID=LTnewLM_100013500.1;Parent=LTnewLM_100013500 LTnewLM_10 AUGUSTUS CDS 328822 329946 1 - 0 ID=LTnewLM_100013500.1:CDS:1;Parent=LTnewLM_100013500.1 ### LTnewLM_10 . polypeptide 328822 329946 . - . ID=LTnewLM_100013500.1:pep;Derives_from=LTnewLM_100013500.1;orthologous_to=LmjF.10.0670_mRNA;ortholog_cluster=OG0000679;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 330860 332389 1 - . ID=LTnewLM_100013600 LTnewLM_10 AUGUSTUS mRNA 330860 332389 1 - . ID=LTnewLM_100013600.1;Parent=LTnewLM_100013600 LTnewLM_10 AUGUSTUS CDS 330860 332389 1 - 0 ID=LTnewLM_100013600.1:CDS:1;Parent=LTnewLM_100013600.1 ### LTnewLM_10 . polypeptide 330860 332389 . - . ID=LTnewLM_100013600.1:pep;Derives_from=LTnewLM_100013600.1;orthologous_to=LmjF.10.0680_mRNA;ortholog_cluster=OG0000680;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 333458 338485 1 - . ID=LTnewLM_100013700 LTnewLM_10 AUGUSTUS mRNA 333458 338485 1 - . ID=LTnewLM_100013700.1;Parent=LTnewLM_100013700 LTnewLM_10 AUGUSTUS CDS 333458 338485 1 - 0 ID=LTnewLM_100013700.1:CDS:1;Parent=LTnewLM_100013700.1 ### LTnewLM_10 . polypeptide 333458 338485 . - . ID=LTnewLM_100013700.1:pep;Derives_from=LTnewLM_100013700.1;orthologous_to=LmjF.10.0690_mRNA;ortholog_cluster=OG0000681;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 339348 342208 0.44 - . ID=LTnewLM_100013800 LTnewLM_10 AUGUSTUS mRNA 339348 342208 0.44 - . ID=LTnewLM_100013800.1;Parent=LTnewLM_100013800 LTnewLM_10 AUGUSTUS CDS 339348 341711 0.44 - 0 ID=LTnewLM_100013800.1:CDS:1;Parent=LTnewLM_100013800.1 LTnewLM_10 AUGUSTUS CDS 341756 342208 0.78 - 0 ID=LTnewLM_100013800.1:CDS:2;Parent=LTnewLM_100013800.1 ### LTnewLM_10 . polypeptide 339348 342208 . - . ID=LTnewLM_100013800.1:pep;Derives_from=LTnewLM_100013800.1;orthologous_to=LmjF.10.0700_mRNA;ortholog_cluster=OG0000682;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076|Pfam:PF13893;Ontology_term=GO:0003676 LTnewLM_10 Pfam protein_match 339425 339649 . - . Parent=LTnewLM_100013800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_10 Pfam protein_match 339869 340018 . - . Parent=LTnewLM_100013800.1:pep;Name=PF13893;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) LTnewLM_10 Pfam protein_match 340931 341140 . - . Parent=LTnewLM_100013800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_10 AUGUSTUS gene 343495 344960 0.52 - . ID=LTnewLM_100013900 LTnewLM_10 AUGUSTUS mRNA 343495 344960 0.52 - . ID=LTnewLM_100013900.1;Parent=LTnewLM_100013900 LTnewLM_10 AUGUSTUS CDS 343495 344388 0.95 - 0 ID=LTnewLM_100013900.1:CDS:1;Parent=LTnewLM_100013900.1 LTnewLM_10 AUGUSTUS CDS 344493 344960 0.54 - 0 ID=LTnewLM_100013900.1:CDS:2;Parent=LTnewLM_100013900.1 ### LTnewLM_10 . polypeptide 343495 344960 . - . ID=LTnewLM_100013900.1:pep;Derives_from=LTnewLM_100013900.1;orthologous_to=LTnewLM_100014000.1,LmjF.10.0710_mRNA,LmjF.10.0715_mRNA,LmjF.10.0720_mRNA;ortholog_cluster=OG0000080;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_10 Pfam protein_match 343770 344474 . - . Parent=LTnewLM_100013900.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_10 AUGUSTUS gene 346539 348005 0.95 - . ID=LTnewLM_100014000 LTnewLM_10 AUGUSTUS mRNA 346539 348005 0.95 - . ID=LTnewLM_100014000.1;Parent=LTnewLM_100014000 LTnewLM_10 AUGUSTUS CDS 346539 347432 0.95 - 0 ID=LTnewLM_100014000.1:CDS:1;Parent=LTnewLM_100014000.1 LTnewLM_10 AUGUSTUS CDS 347742 348005 0.98 - 0 ID=LTnewLM_100014000.1:CDS:2;Parent=LTnewLM_100014000.1 ### LTnewLM_10 . polypeptide 346539 348005 . - . ID=LTnewLM_100014000.1:pep;Derives_from=LTnewLM_100014000.1;orthologous_to=LTnewLM_100013900.1,LmjF.10.0710_mRNA,LmjF.10.0715_mRNA,LmjF.10.0720_mRNA;ortholog_cluster=OG0000080;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_10 Pfam protein_match 347019 347723 . - . Parent=LTnewLM_100014000.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_10 AUGUSTUS gene 350195 351040 1 - . ID=LTnewLM_100014100 LTnewLM_10 AUGUSTUS mRNA 350195 351040 1 - . ID=LTnewLM_100014100.1;Parent=LTnewLM_100014100 LTnewLM_10 AUGUSTUS CDS 350195 351040 1 - 0 ID=LTnewLM_100014100.1:CDS:1;Parent=LTnewLM_100014100.1 ### LTnewLM_10 . polypeptide 350195 351040 . - . ID=LTnewLM_100014100.1:pep;Derives_from=LTnewLM_100014100.1;orthologous_to=LmjF.10.0730_mRNA;ortholog_cluster=OG0000683;product=term%3DCytidine and deoxycytidylate deaminase zinc-binding region/MafB19-like deaminase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00383|Pfam:PF14437;Ontology_term=GO:0008270,GO:0016787 LTnewLM_10 Pfam protein_match 350489 350596 . - . Parent=LTnewLM_100014100.1:pep;Name=PF14437;signature_desc=MafB19-like deaminase LTnewLM_10 Pfam protein_match 350507 351019 . - . Parent=LTnewLM_100014100.1:pep;Name=PF00383;signature_desc=Cytidine and deoxycytidylate deaminase zinc-binding region;Ontology_term=GO:0008270,GO:0016787 ### LTnewLM_10 AUGUSTUS gene 353014 353391 1 - . ID=LTnewLM_100014200 LTnewLM_10 AUGUSTUS mRNA 353014 353391 1 - . ID=LTnewLM_100014200.1;Parent=LTnewLM_100014200 LTnewLM_10 AUGUSTUS CDS 353014 353391 1 - 0 ID=LTnewLM_100014200.1:CDS:1;Parent=LTnewLM_100014200.1 ### LTnewLM_10 . polypeptide 353014 353391 . - . ID=LTnewLM_100014200.1:pep;Derives_from=LTnewLM_100014200.1;orthologous_to=LmjF.10.0740_mRNA;ortholog_cluster=OG0000684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 356432 362431 1 - . ID=LTnewLM_100014300 LTnewLM_10 AUGUSTUS mRNA 356432 362431 1 - . ID=LTnewLM_100014300.1;Parent=LTnewLM_100014300 LTnewLM_10 AUGUSTUS CDS 356432 359943 1 - 2 ID=LTnewLM_100014300.1:CDS:1;Parent=LTnewLM_100014300.1 LTnewLM_10 AUGUSTUS CDS 359992 362431 1 - 0 ID=LTnewLM_100014300.1:CDS:2;Parent=LTnewLM_100014300.1 ### LTnewLM_10 . polypeptide 356432 362431 . - . ID=LTnewLM_100014300.1:pep;Derives_from=LTnewLM_100014300.1;orthologous_to=LmjF.10.0750_mRNA;ortholog_cluster=OG0000685;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 364420 366345 1 - . ID=LTnewLM_100014400 LTnewLM_10 AUGUSTUS mRNA 364420 366345 1 - . ID=LTnewLM_100014400.1;Parent=LTnewLM_100014400 LTnewLM_10 AUGUSTUS CDS 364420 366345 1 - 0 ID=LTnewLM_100014400.1:CDS:1;Parent=LTnewLM_100014400.1 ### LTnewLM_10 . polypeptide 364420 366345 . - . ID=LTnewLM_100014400.1:pep;Derives_from=LTnewLM_100014400.1;orthologous_to=LmjF.10.0760_mRNA;ortholog_cluster=OG0000686;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 366990 369371 1 - . ID=LTnewLM_100014500 LTnewLM_10 AUGUSTUS mRNA 366990 369371 1 - . ID=LTnewLM_100014500.1;Parent=LTnewLM_100014500 LTnewLM_10 AUGUSTUS CDS 366990 369371 1 - 0 ID=LTnewLM_100014500.1:CDS:1;Parent=LTnewLM_100014500.1 ### LTnewLM_10 . polypeptide 366990 369371 . - . ID=LTnewLM_100014500.1:pep;Derives_from=LTnewLM_100014500.1;orthologous_to=LmjF.10.0770_mRNA;ortholog_cluster=OG0000687;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 370853 372112 1 - . ID=LTnewLM_100014600 LTnewLM_10 AUGUSTUS mRNA 370853 372112 1 - . ID=LTnewLM_100014600.1;Parent=LTnewLM_100014600 LTnewLM_10 AUGUSTUS CDS 370853 372112 1 - 0 ID=LTnewLM_100014600.1:CDS:1;Parent=LTnewLM_100014600.1 ### LTnewLM_10 . polypeptide 370853 372112 . - . ID=LTnewLM_100014600.1:pep;Derives_from=LTnewLM_100014600.1;orthologous_to=LmjF.10.0780_mRNA;ortholog_cluster=OG0000688;product=term%3DWD domain%2C G-beta repeat/Anaphase-promoting complex subunit 4 WD40 domain/Eukaryotic translation initiation factor eIF2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF12894|Pfam:PF08662;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 370862 370975 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 370988 371098 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371003 371323 . - . Parent=LTnewLM_100014600.1:pep;Name=PF08662;signature_desc=Eukaryotic translation initiation factor eIF2A LTnewLM_10 Pfam protein_match 371114 371227 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371240 371350 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371297 371503 . - . Parent=LTnewLM_100014600.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_10 Pfam protein_match 371366 371479 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371492 371605 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371618 371731 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_10 Pfam protein_match 371750 371854 . - . Parent=LTnewLM_100014600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_10 AUGUSTUS gene 374048 374713 1 - . ID=LTnewLM_100014700 LTnewLM_10 AUGUSTUS mRNA 374048 374713 1 - . ID=LTnewLM_100014700.1;Parent=LTnewLM_100014700 LTnewLM_10 AUGUSTUS CDS 374048 374713 1 - 0 ID=LTnewLM_100014700.1:CDS:1;Parent=LTnewLM_100014700.1 ### LTnewLM_10 . polypeptide 374048 374713 . - . ID=LTnewLM_100014700.1:pep;Derives_from=LTnewLM_100014700.1;orthologous_to=LmjF.10.0790_mRNA;ortholog_cluster=OG0000689;product=term%3DDRG Family Regulatory Proteins%2C Tma46%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16543 LTnewLM_10 Pfam protein_match 374105 374344 . - . Parent=LTnewLM_100014700.1:pep;Name=PF16543;signature_desc=DRG Family Regulatory Proteins%2C Tma46 ### LTnewLM_10 AUGUSTUS gene 375663 379487 1 - . ID=LTnewLM_100014800 LTnewLM_10 AUGUSTUS mRNA 375663 379487 1 - . ID=LTnewLM_100014800.1;Parent=LTnewLM_100014800 LTnewLM_10 AUGUSTUS CDS 375663 379487 1 - 0 ID=LTnewLM_100014800.1:CDS:1;Parent=LTnewLM_100014800.1 ### LTnewLM_10 . polypeptide 375663 379487 . - . ID=LTnewLM_100014800.1:pep;Derives_from=LTnewLM_100014800.1;orthologous_to=LmjF.10.0800_mRNA;ortholog_cluster=OG0000690;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 381095 387316 1 - . ID=LTnewLM_100014900 LTnewLM_10 AUGUSTUS mRNA 381095 387316 1 - . ID=LTnewLM_100014900.1;Parent=LTnewLM_100014900 LTnewLM_10 AUGUSTUS CDS 381095 387316 1 - 0 ID=LTnewLM_100014900.1:CDS:1;Parent=LTnewLM_100014900.1 ### LTnewLM_10 . polypeptide 381095 387316 . - . ID=LTnewLM_100014900.1:pep;Derives_from=LTnewLM_100014900.1;orthologous_to=LmjF.10.0810_mRNA;ortholog_cluster=OG0000691;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 388853 390421 1 - . ID=LTnewLM_100015000 LTnewLM_10 AUGUSTUS mRNA 388853 390421 1 - . ID=LTnewLM_100015000.1;Parent=LTnewLM_100015000 LTnewLM_10 AUGUSTUS CDS 388853 390421 1 - 0 ID=LTnewLM_100015000.1:CDS:1;Parent=LTnewLM_100015000.1 ### LTnewLM_10 . polypeptide 388853 390421 . - . ID=LTnewLM_100015000.1:pep;Derives_from=LTnewLM_100015000.1;orthologous_to=LmjF.10.0820_mRNA;ortholog_cluster=OG0000692;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 391044 396283 0.77 - . ID=LTnewLM_100015100 LTnewLM_10 AUGUSTUS mRNA 391044 396283 0.77 - . ID=LTnewLM_100015100.1;Parent=LTnewLM_100015100 LTnewLM_10 AUGUSTUS CDS 391044 395909 0.77 - 0 ID=LTnewLM_100015100.1:CDS:1;Parent=LTnewLM_100015100.1 LTnewLM_10 AUGUSTUS CDS 395966 396283 0.98 - 0 ID=LTnewLM_100015100.1:CDS:2;Parent=LTnewLM_100015100.1 ### LTnewLM_10 . polypeptide 391044 396283 . - . ID=LTnewLM_100015100.1:pep;Derives_from=LTnewLM_100015100.1;orthologous_to=LmjF.10.0830_mRNA;ortholog_cluster=OG0000693;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_10 Pfam protein_match 391466 391963 . - . Parent=LTnewLM_100015100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_10 AUGUSTUS gene 397798 399996 1 - . ID=LTnewLM_100015200 LTnewLM_10 AUGUSTUS mRNA 397798 399996 1 - . ID=LTnewLM_100015200.1;Parent=LTnewLM_100015200 LTnewLM_10 AUGUSTUS CDS 397798 399996 1 - 0 ID=LTnewLM_100015200.1:CDS:1;Parent=LTnewLM_100015200.1 ### LTnewLM_10 . polypeptide 397798 399996 . - . ID=LTnewLM_100015200.1:pep;Derives_from=LTnewLM_100015200.1;orthologous_to=LmjF.10.0840_mRNA;ortholog_cluster=OG0000694;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 400729 401103 1 - . ID=LTnewLM_100015300 LTnewLM_10 AUGUSTUS mRNA 400729 401103 1 - . ID=LTnewLM_100015300.1;Parent=LTnewLM_100015300 LTnewLM_10 AUGUSTUS CDS 400729 401103 1 - 0 ID=LTnewLM_100015300.1:CDS:1;Parent=LTnewLM_100015300.1 ### LTnewLM_10 . polypeptide 400729 401103 . - . ID=LTnewLM_100015300.1:pep;Derives_from=LTnewLM_100015300.1;orthologous_to=LmjF.10.0850_mRNA;ortholog_cluster=OG0000695;product=term%3DNuclear transport factor 2 (NTF2) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02136;Ontology_term=GO:0006810,GO:0005622 LTnewLM_10 Pfam protein_match 400759 401082 . - . Parent=LTnewLM_100015300.1:pep;Name=PF02136;signature_desc=Nuclear transport factor 2 (NTF2) domain;Ontology_term=GO:0006810,GO:0005622 ### LTnewLM_10 AUGUSTUS gene 402221 402811 1 - . ID=LTnewLM_100015400 LTnewLM_10 AUGUSTUS mRNA 402221 402811 1 - . ID=LTnewLM_100015400.1;Parent=LTnewLM_100015400 LTnewLM_10 AUGUSTUS CDS 402221 402811 1 - 0 ID=LTnewLM_100015400.1:CDS:1;Parent=LTnewLM_100015400.1 ### LTnewLM_10 . polypeptide 402221 402811 . - . ID=LTnewLM_100015400.1:pep;Derives_from=LTnewLM_100015400.1;orthologous_to=LmjF.10.0860_mRNA;ortholog_cluster=OG0000696;product=term%3DRibosome biogenesis protein Nop16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09420 LTnewLM_10 Pfam protein_match 402344 402496 . - . Parent=LTnewLM_100015400.1:pep;Name=PF09420;signature_desc=Ribosome biogenesis protein Nop16 ### LTnewLM_10 AUGUSTUS gene 403781 404173 1 - . ID=LTnewLM_100015500 LTnewLM_10 AUGUSTUS mRNA 403781 404173 1 - . ID=LTnewLM_100015500.1;Parent=LTnewLM_100015500 LTnewLM_10 AUGUSTUS CDS 403781 404173 1 - 0 ID=LTnewLM_100015500.1:CDS:1;Parent=LTnewLM_100015500.1 ### LTnewLM_10 . polypeptide 403781 404173 . - . ID=LTnewLM_100015500.1:pep;Derives_from=LTnewLM_100015500.1;orthologous_to=LmjF.10.0970_mRNA,LmjF.16.0600_mRNA;ortholog_cluster=OG0000311;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_10 Pfam protein_match 403799 404173 . - . Parent=LTnewLM_100015500.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_10 Pfam protein_match 403808 404005 . - . Parent=LTnewLM_100015500.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_10 AUGUSTUS gene 404920 408423 1 - . ID=LTnewLM_100015600 LTnewLM_10 AUGUSTUS mRNA 404920 408423 1 - . ID=LTnewLM_100015600.1;Parent=LTnewLM_100015600 LTnewLM_10 AUGUSTUS CDS 404920 408423 1 - 0 ID=LTnewLM_100015600.1:CDS:1;Parent=LTnewLM_100015600.1 ### LTnewLM_10 . polypeptide 404920 408423 . - . ID=LTnewLM_100015600.1:pep;Derives_from=LTnewLM_100015600.1;orthologous_to=LmjF.10.0880_mRNA;ortholog_cluster=OG0000697;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 409332 409811 1 - . ID=LTnewLM_100015700 LTnewLM_10 AUGUSTUS mRNA 409332 409811 1 - . ID=LTnewLM_100015700.1;Parent=LTnewLM_100015700 LTnewLM_10 AUGUSTUS CDS 409332 409811 1 - 0 ID=LTnewLM_100015700.1:CDS:1;Parent=LTnewLM_100015700.1 ### LTnewLM_10 . polypeptide 409332 409811 . - . ID=LTnewLM_100015700.1:pep;Derives_from=LTnewLM_100015700.1;orthologous_to=LmjF.10.0890_mRNA;ortholog_cluster=OG0000698;product=term%3DFKBP-type peptidyl-prolyl cis-trans isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00254;Ontology_term=GO:0006457 LTnewLM_10 Pfam protein_match 409419 409679 . - . Parent=LTnewLM_100015700.1:pep;Name=PF00254;signature_desc=FKBP-type peptidyl-prolyl cis-trans isomerase;Ontology_term=GO:0006457 ### LTnewLM_10 AUGUSTUS gene 410673 415388 1 - . ID=LTnewLM_100015800 LTnewLM_10 AUGUSTUS mRNA 410673 415388 1 - . ID=LTnewLM_100015800.1;Parent=LTnewLM_100015800 LTnewLM_10 AUGUSTUS CDS 410673 415388 1 - 0 ID=LTnewLM_100015800.1:CDS:1;Parent=LTnewLM_100015800.1 ### LTnewLM_10 . polypeptide 410673 415388 . - . ID=LTnewLM_100015800.1:pep;Derives_from=LTnewLM_100015800.1;orthologous_to=LmjF.10.0900_mRNA;ortholog_cluster=OG0000699;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 416746 417372 1 - . ID=LTnewLM_100015900 LTnewLM_10 AUGUSTUS mRNA 416746 417372 1 - . ID=LTnewLM_100015900.1;Parent=LTnewLM_100015900 LTnewLM_10 AUGUSTUS CDS 416746 417372 1 - 0 ID=LTnewLM_100015900.1:CDS:1;Parent=LTnewLM_100015900.1 ### LTnewLM_10 . polypeptide 416746 417372 . - . ID=LTnewLM_100015900.1:pep;Derives_from=LTnewLM_100015900.1;orthologous_to=LmjF.10.0910_mRNA;ortholog_cluster=OG0000700;product=term%3DADP-ribosylation factor family/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_10 Pfam protein_match 416869 417348 . - . Parent=LTnewLM_100015900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_10 Pfam protein_match 416875 417360 . - . Parent=LTnewLM_100015900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_10 Pfam protein_match 417007 417348 . - . Parent=LTnewLM_100015900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_10 Pfam protein_match 417106 417348 . - . Parent=LTnewLM_100015900.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_10 AUGUSTUS gene 419404 420003 1 - . ID=LTnewLM_100016000 LTnewLM_10 AUGUSTUS mRNA 419404 420003 1 - . ID=LTnewLM_100016000.1;Parent=LTnewLM_100016000 LTnewLM_10 AUGUSTUS CDS 419404 420003 1 - 0 ID=LTnewLM_100016000.1:CDS:1;Parent=LTnewLM_100016000.1 ### LTnewLM_10 . polypeptide 419404 420003 . - . ID=LTnewLM_100016000.1:pep;Derives_from=LTnewLM_100016000.1;orthologous_to=LmjF.10.0920_mRNA;ortholog_cluster=OG0000701;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 420768 421139 1 - . ID=LTnewLM_100016100 LTnewLM_10 AUGUSTUS mRNA 420768 421139 1 - . ID=LTnewLM_100016100.1;Parent=LTnewLM_100016100 LTnewLM_10 AUGUSTUS CDS 420768 421139 1 - 0 ID=LTnewLM_100016100.1:CDS:1;Parent=LTnewLM_100016100.1 ### LTnewLM_10 . polypeptide 420768 421139 . - . ID=LTnewLM_100016100.1:pep;Derives_from=LTnewLM_100016100.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 421384 422813 1 - . ID=LTnewLM_100016200 LTnewLM_10 AUGUSTUS mRNA 421384 422813 1 - . ID=LTnewLM_100016200.1;Parent=LTnewLM_100016200 LTnewLM_10 AUGUSTUS CDS 421384 421897 1 - 1 ID=LTnewLM_100016200.1:CDS:1;Parent=LTnewLM_100016200.1 LTnewLM_10 AUGUSTUS CDS 422311 422813 1 - 0 ID=LTnewLM_100016200.1:CDS:2;Parent=LTnewLM_100016200.1 ### LTnewLM_10 . polypeptide 421384 422813 . - . ID=LTnewLM_100016200.1:pep;Derives_from=LTnewLM_100016200.1;product=term%3Dhypothetical protein ### LTnewLM_10 AUGUSTUS gene 424085 424303 1 - . ID=LTnewLM_100016300 LTnewLM_10 AUGUSTUS mRNA 424085 424303 1 - . ID=LTnewLM_100016300.1;Parent=LTnewLM_100016300 LTnewLM_10 AUGUSTUS CDS 424085 424303 1 - 0 ID=LTnewLM_100016300.1:CDS:1;Parent=LTnewLM_100016300.1 ### LTnewLM_10 . polypeptide 424085 424303 . - . ID=LTnewLM_100016300.1:pep;Derives_from=LTnewLM_100016300.1;product=term%3Dhypothetical protein ### LTnewLM_10 . polypeptide 424569 425158 . - . ID=LTnewLM_100016400.1:pep;Derives_from=LTnewLM_100016400.1;orthologous_to=LTnewLM_100016400.2;ortholog_cluster=OG0000702;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 424569 425404 1.53 - . ID=LTnewLM_100016400 LTnewLM_10 AUGUSTUS mRNA 424569 425158 0.94 - . ID=LTnewLM_100016400.1;Parent=LTnewLM_100016400 LTnewLM_10 AUGUSTUS CDS 424569 424656 0.99 - 1 ID=LTnewLM_100016400.1:CDS:1;Parent=LTnewLM_100016400.1 LTnewLM_10 AUGUSTUS CDS 424713 425158 0.94 - 0 ID=LTnewLM_100016400.1:CDS:2;Parent=LTnewLM_100016400.1 LTnewLM_10 AUGUSTUS mRNA 424569 425404 0.59 - . ID=LTnewLM_100016400.2;Parent=LTnewLM_100016400 LTnewLM_10 AUGUSTUS CDS 424569 424656 0.97 - 1 ID=LTnewLM_100016400.2:CDS:1;Parent=LTnewLM_100016400.2 LTnewLM_10 AUGUSTUS CDS 424713 425404 0.59 - 0 ID=LTnewLM_100016400.2:CDS:2;Parent=LTnewLM_100016400.2 ### LTnewLM_10 . polypeptide 424569 425404 . - . ID=LTnewLM_100016400.2:pep;Derives_from=LTnewLM_100016400.2;orthologous_to=LTnewLM_100016400.1;ortholog_cluster=OG0000702;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 428161 432162 1 - . ID=LTnewLM_100016500 LTnewLM_10 AUGUSTUS mRNA 428161 432162 1 - . ID=LTnewLM_100016500.1;Parent=LTnewLM_100016500 LTnewLM_10 AUGUSTUS CDS 428161 432162 1 - 0 ID=LTnewLM_100016500.1:CDS:1;Parent=LTnewLM_100016500.1 ### LTnewLM_10 . polypeptide 428161 432162 . - . ID=LTnewLM_100016500.1:pep;Derives_from=LTnewLM_100016500.1;orthologous_to=LmjF.10.0940_mRNA;ortholog_cluster=OG0000703;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 433412 433735 1 - . ID=LTnewLM_100016600 LTnewLM_10 AUGUSTUS mRNA 433412 433735 1 - . ID=LTnewLM_100016600.1;Parent=LTnewLM_100016600 LTnewLM_10 AUGUSTUS CDS 433412 433735 1 - 0 ID=LTnewLM_100016600.1:CDS:1;Parent=LTnewLM_100016600.1 ### LTnewLM_10 . polypeptide 433412 433735 . - . ID=LTnewLM_100016600.1:pep;Derives_from=LTnewLM_100016600.1;orthologous_to=LmjF.10.0945_mRNA;ortholog_cluster=OG0000704;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 434695 436296 1 - . ID=LTnewLM_100016700 LTnewLM_10 AUGUSTUS mRNA 434695 436296 1 - . ID=LTnewLM_100016700.1;Parent=LTnewLM_100016700 LTnewLM_10 AUGUSTUS CDS 434695 436296 1 - 0 ID=LTnewLM_100016700.1:CDS:1;Parent=LTnewLM_100016700.1 ### LTnewLM_10 . polypeptide 434695 436296 . - . ID=LTnewLM_100016700.1:pep;Derives_from=LTnewLM_100016700.1;orthologous_to=LmjF.10.0950_mRNA;ortholog_cluster=OG0000705;product=term%3DInitiation factor 2 subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01008;Ontology_term=GO:0044237 LTnewLM_10 Pfam protein_match 434764 435423 . - . Parent=LTnewLM_100016700.1:pep;Name=PF01008;signature_desc=Initiation factor 2 subunit family;Ontology_term=GO:0044237 ### LTnewLM_10 Liftoff gene 437673 440240 . - . ID=LTnewLM_100016800;coverage=0.996;sequence_ID=0.941;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.0960_0 LTnewLM_10 Liftoff mRNA 437673 440240 . - . ID=LTnewLM_100016800.1;Parent=LTnewLM_100016800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 Liftoff CDS 437673 440240 . - 0 ID=LTnewLM_100016800.1:CDS:1;Parent=LTnewLM_100016800.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 437673 440240 . - . ID=LTnewLM_100016800.1:pep;Derives_from=LTnewLM_100016800.1;orthologous_to=LmjF.10.0960_mRNA;ortholog_cluster=OG0000706;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 441631 442023 1 - . ID=LTnewLM_100016900 LTnewLM_10 AUGUSTUS mRNA 441631 442023 1 - . ID=LTnewLM_100016900.1;Parent=LTnewLM_100016900 LTnewLM_10 AUGUSTUS CDS 441631 442023 1 - 0 ID=LTnewLM_100016900.1:CDS:1;Parent=LTnewLM_100016900.1 ### LTnewLM_10 . polypeptide 441631 442023 . - . ID=LTnewLM_100016900.1:pep;Derives_from=LTnewLM_100016900.1;orthologous_to=LmjF.10.0870_mRNA,LmjF.10.0990_mRNA,LmjF.16.0570_mRNA,LmjF.16.0575_mRNA,LmjF.16.0610_mRNA;ortholog_cluster=OG0000051;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_10 Pfam protein_match 441649 442023 . - . Parent=LTnewLM_100016900.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_10 Pfam protein_match 441658 441855 . - . Parent=LTnewLM_100016900.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_10 . pseudogene 443828 445751 . - . ID=LTnewLM_100017000:pseudogene;coverage=0.996;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.0980_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 443828 445751 . - . ID=LTnewLM_100017000.1;Parent=LTnewLM_100017000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 443828 445751 . - . ID=LTnewLM_100017000.1:pseudogenic_exon:1;Parent=LTnewLM_100017000.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 443828 445751 . - . ID=LTnewLM_100017000.1:pep;Derives_from=LTnewLM_100017000.1;orthologous_to=LmjF.10.0980_mRNA;ortholog_cluster=OG0007424;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 447052 447444 1 - . ID=LTnewLM_100017100 LTnewLM_10 AUGUSTUS mRNA 447052 447444 1 - . ID=LTnewLM_100017100.1;Parent=LTnewLM_100017100 LTnewLM_10 AUGUSTUS CDS 447052 447444 1 - 0 ID=LTnewLM_100017100.1:CDS:1;Parent=LTnewLM_100017100.1 ### LTnewLM_10 . polypeptide 447052 447444 . - . ID=LTnewLM_100017100.1:pep;Derives_from=LTnewLM_100017100.1;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_10 Pfam protein_match 447070 447444 . - . Parent=LTnewLM_100017100.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_10 Pfam protein_match 447079 447276 . - . Parent=LTnewLM_100017100.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_10 AUGUSTUS gene 447919 449178 1 - . ID=LTnewLM_100017200 LTnewLM_10 AUGUSTUS mRNA 447919 449178 1 - . ID=LTnewLM_100017200.1;Parent=LTnewLM_100017200 LTnewLM_10 AUGUSTUS CDS 447919 449178 1 - 0 ID=LTnewLM_100017200.1:CDS:1;Parent=LTnewLM_100017200.1 ### LTnewLM_10 . polypeptide 447919 449178 . - . ID=LTnewLM_100017200.1:pep;Derives_from=LTnewLM_100017200.1;orthologous_to=LmjF.10.1000_mRNA;ortholog_cluster=OG0000707;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . pseudogene 450454 451478 . - . ID=LTnewLM_100017300:pseudogene;coverage=0.999;sequence_ID=0.961;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.10.1010_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 450454 451478 . - . ID=LTnewLM_100017300.1;Parent=LTnewLM_100017300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 450454 451478 . - . ID=LTnewLM_100017300.1:pseudogenic_exon:1;Parent=LTnewLM_100017300.1;extra_copy_number=0 ### LTnewLM_10 . polypeptide 450454 451478 . - . ID=LTnewLM_100017300.1:pep;Derives_from=LTnewLM_100017300.1;orthologous_to=LmjF.10.1010_mRNA;ortholog_cluster=OG0007425;product=term%3DPhosphorylase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01048;Ontology_term=GO:0003824,GO:0009116 LTnewLM_10 Pfam protein_match 450906 451373 . - . Parent=LTnewLM_100017300.1:pep;Name=PF01048;signature_desc=Phosphorylase superfamily;Ontology_term=GO:0003824,GO:0009116 ### LTnewLM_10 AUGUSTUS gene 452807 453985 1 - . ID=LTnewLM_100017400 LTnewLM_10 AUGUSTUS mRNA 452807 453985 1 - . ID=LTnewLM_100017400.1;Parent=LTnewLM_100017400 LTnewLM_10 AUGUSTUS CDS 452807 453985 1 - 0 ID=LTnewLM_100017400.1:CDS:1;Parent=LTnewLM_100017400.1 ### LTnewLM_10 . polypeptide 452807 453985 . - . ID=LTnewLM_100017400.1:pep;Derives_from=LTnewLM_100017400.1;orthologous_to=LmjF.10.1020_mRNA;ortholog_cluster=OG0000708;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_10 Pfam protein_match 452849 453085 . - . Parent=LTnewLM_100017400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_10 Pfam protein_match 453203 453460 . - . Parent=LTnewLM_100017400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_10 AUGUSTUS gene 455852 456991 1 - . ID=LTnewLM_100017500 LTnewLM_10 AUGUSTUS mRNA 455852 456991 1 - . ID=LTnewLM_100017500.1;Parent=LTnewLM_100017500 LTnewLM_10 AUGUSTUS CDS 455852 456991 1 - 0 ID=LTnewLM_100017500.1:CDS:1;Parent=LTnewLM_100017500.1 ### LTnewLM_10 . polypeptide 455852 456991 . - . ID=LTnewLM_100017500.1:pep;Derives_from=LTnewLM_100017500.1;orthologous_to=LmjF.10.1030_mRNA;ortholog_cluster=OG0000709;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_10 Pfam protein_match 456272 456475 . - . Parent=LTnewLM_100017500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_10 AUGUSTUS gene 458142 461813 1 - . ID=LTnewLM_100017600 LTnewLM_10 AUGUSTUS mRNA 458142 461813 1 - . ID=LTnewLM_100017600.1;Parent=LTnewLM_100017600 LTnewLM_10 AUGUSTUS CDS 458142 461813 1 - 0 ID=LTnewLM_100017600.1:CDS:1;Parent=LTnewLM_100017600.1 ### LTnewLM_10 . polypeptide 458142 461813 . - . ID=LTnewLM_100017600.1:pep;Derives_from=LTnewLM_100017600.1;orthologous_to=LmjF.10.1040_mRNA;ortholog_cluster=OG0000710;product=term%3DCH-like domain in sperm protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06294 LTnewLM_10 Pfam protein_match 461388 461669 . - . Parent=LTnewLM_100017600.1:pep;Name=PF06294;signature_desc=CH-like domain in sperm protein ### LTnewLM_10 AUGUSTUS gene 462360 463187 1 - . ID=LTnewLM_100017700 LTnewLM_10 AUGUSTUS mRNA 462360 463187 1 - . ID=LTnewLM_100017700.1;Parent=LTnewLM_100017700 LTnewLM_10 AUGUSTUS CDS 462360 463187 1 - 0 ID=LTnewLM_100017700.1:CDS:1;Parent=LTnewLM_100017700.1 ### LTnewLM_10 . polypeptide 462360 463187 . - . ID=LTnewLM_100017700.1:pep;Derives_from=LTnewLM_100017700.1;orthologous_to=LmjF.10.1050_mRNA;ortholog_cluster=OG0000711;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_10 Pfam protein_match 462891 463061 . - . Parent=LTnewLM_100017700.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_10 AUGUSTUS gene 463851 464819 1 - . ID=LTnewLM_100017800 LTnewLM_10 AUGUSTUS mRNA 463851 464819 1 - . ID=LTnewLM_100017800.1;Parent=LTnewLM_100017800 LTnewLM_10 AUGUSTUS CDS 463851 464819 1 - 0 ID=LTnewLM_100017800.1:CDS:1;Parent=LTnewLM_100017800.1 ### LTnewLM_10 . polypeptide 463851 464819 . - . ID=LTnewLM_100017800.1:pep;Derives_from=LTnewLM_100017800.1;orthologous_to=LmjF.10.1060_mRNA;ortholog_cluster=OG0000712;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 465452 467230 1 - . ID=LTnewLM_100017900 LTnewLM_10 AUGUSTUS mRNA 465452 467230 1 - . ID=LTnewLM_100017900.1;Parent=LTnewLM_100017900 LTnewLM_10 AUGUSTUS CDS 465452 467230 1 - 0 ID=LTnewLM_100017900.1:CDS:1;Parent=LTnewLM_100017900.1 ### LTnewLM_10 . polypeptide 465452 467230 . - . ID=LTnewLM_100017900.1:pep;Derives_from=LTnewLM_100017900.1;orthologous_to=LmjF.10.1070_mRNA;ortholog_cluster=OG0000713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 470054 472402 1 - . ID=LTnewLM_100018000 LTnewLM_10 AUGUSTUS mRNA 470054 472402 1 - . ID=LTnewLM_100018000.1;Parent=LTnewLM_100018000 LTnewLM_10 AUGUSTUS CDS 470054 472402 1 - 0 ID=LTnewLM_100018000.1:CDS:1;Parent=LTnewLM_100018000.1 ### LTnewLM_10 . polypeptide 470054 472402 . - . ID=LTnewLM_100018000.1:pep;Derives_from=LTnewLM_100018000.1;orthologous_to=LmjF.10.1080_mRNA;ortholog_cluster=OG0000714;product=term%3DMIF4G domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02854;Ontology_term=GO:0003723,GO:0005515 LTnewLM_10 Pfam protein_match 471227 471895 . - . Parent=LTnewLM_100018000.1:pep;Name=PF02854;signature_desc=MIF4G domain;Ontology_term=GO:0003723,GO:0005515 ### LTnewLM_10 AUGUSTUS gene 476473 477006 1 - . ID=LTnewLM_100018100 LTnewLM_10 AUGUSTUS mRNA 476473 477006 1 - . ID=LTnewLM_100018100.1;Parent=LTnewLM_100018100 LTnewLM_10 AUGUSTUS CDS 476473 477006 1 - 0 ID=LTnewLM_100018100.1:CDS:1;Parent=LTnewLM_100018100.1 ### LTnewLM_10 . polypeptide 476473 477006 . - . ID=LTnewLM_100018100.1:pep;Derives_from=LTnewLM_100018100.1;orthologous_to=LmjF.10.1090_mRNA;ortholog_cluster=OG0000715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 478634 479908 . - . ID=LTnewLM_100018200.1:pep;Derives_from=LTnewLM_100018200.1;orthologous_to=LTnewLM_100018200.2,LmjF.10.1100.1_mRNA,LmjF.10.1100.2_mRNA;ortholog_cluster=OG0000282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 478634 480136 . - . ID=LTnewLM_100018200.2:pep;Derives_from=LTnewLM_100018200.2;orthologous_to=LTnewLM_100018200.1,LmjF.10.1100.1_mRNA,LmjF.10.1100.2_mRNA;ortholog_cluster=OG0000282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . pseudogene 478634 481210 . - . ID=LTnewLM_100018200:pseudogene;coverage=0.989;sequence_ID=0.901;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.1100_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 478634 479976 . - . ID=LTnewLM_100018200.1;Parent=LTnewLM_100018200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 478634 479908 . - . ID=LTnewLM_100018200.1:pseudogenic_exon:1;Parent=LTnewLM_100018200.1;extra_copy_number=0 LTnewLM_10 . pseudogenic_transcript 478634 481210 . - . ID=LTnewLM_100018200.2;Parent=LTnewLM_100018200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 478634 480136 . - . ID=LTnewLM_100018200.2:pseudogenic_exon:1;Parent=LTnewLM_100018200.2;extra_copy_number=0 ### LTnewLM_10 AUGUSTUS gene 482467 484032 1 - . ID=LTnewLM_100018300 LTnewLM_10 AUGUSTUS mRNA 482467 484032 1 - . ID=LTnewLM_100018300.1;Parent=LTnewLM_100018300 LTnewLM_10 AUGUSTUS CDS 482467 484032 1 - 0 ID=LTnewLM_100018300.1:CDS:1;Parent=LTnewLM_100018300.1 ### LTnewLM_10 . polypeptide 482467 484032 . - . ID=LTnewLM_100018300.1:pep;Derives_from=LTnewLM_100018300.1;orthologous_to=LmjF.10.1110_mRNA;ortholog_cluster=OG0000716;product=term%3DAtaxin 2 SM domain/LsmAD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14438|Pfam:PF06741 LTnewLM_10 Pfam protein_match 483385 483588 . - . Parent=LTnewLM_100018300.1:pep;Name=PF06741;signature_desc=LsmAD domain LTnewLM_10 Pfam protein_match 483757 484002 . - . Parent=LTnewLM_100018300.1:pep;Name=PF14438;signature_desc=Ataxin 2 SM domain ### LTnewLM_10 AUGUSTUS gene 485132 485710 1 - . ID=LTnewLM_100018400 LTnewLM_10 AUGUSTUS mRNA 485132 485710 1 - . ID=LTnewLM_100018400.1;Parent=LTnewLM_100018400 LTnewLM_10 AUGUSTUS CDS 485132 485710 1 - 0 ID=LTnewLM_100018400.1:CDS:1;Parent=LTnewLM_100018400.1 ### LTnewLM_10 . polypeptide 485132 485710 . - . ID=LTnewLM_100018400.1:pep;Derives_from=LTnewLM_100018400.1;orthologous_to=LmjF.10.1120_mRNA;ortholog_cluster=OG0000717;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 486676 491259 1 - . ID=LTnewLM_100018500 LTnewLM_10 AUGUSTUS mRNA 486676 491259 1 - . ID=LTnewLM_100018500.1;Parent=LTnewLM_100018500 LTnewLM_10 AUGUSTUS CDS 486676 491259 1 - 0 ID=LTnewLM_100018500.1:CDS:1;Parent=LTnewLM_100018500.1 ### LTnewLM_10 . polypeptide 486676 491259 . - . ID=LTnewLM_100018500.1:pep;Derives_from=LTnewLM_100018500.1;orthologous_to=LmjF.10.1130_mRNA;ortholog_cluster=OG0000718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 493450 494532 1 - . ID=LTnewLM_100018600 LTnewLM_10 AUGUSTUS mRNA 493450 494532 1 - . ID=LTnewLM_100018600.1;Parent=LTnewLM_100018600 LTnewLM_10 AUGUSTUS CDS 493450 494532 1 - 0 ID=LTnewLM_100018600.1:CDS:1;Parent=LTnewLM_100018600.1 ### LTnewLM_10 . polypeptide 493450 494532 . - . ID=LTnewLM_100018600.1:pep;Derives_from=LTnewLM_100018600.1;orthologous_to=LmjF.10.1140_mRNA;ortholog_cluster=OG0000719;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Prokaryotic RING finger family 4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF14447 LTnewLM_10 Pfam protein_match 493465 493608 . - . Parent=LTnewLM_100018600.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_10 Pfam protein_match 493468 493599 . - . Parent=LTnewLM_100018600.1:pep;Name=PF14447;signature_desc=Prokaryotic RING finger family 4 ### LTnewLM_10 AUGUSTUS gene 495592 497034 1 - . ID=LTnewLM_100018700 LTnewLM_10 AUGUSTUS mRNA 495592 497034 1 - . ID=LTnewLM_100018700.1;Parent=LTnewLM_100018700 LTnewLM_10 AUGUSTUS CDS 495592 497034 1 - 0 ID=LTnewLM_100018700.1:CDS:1;Parent=LTnewLM_100018700.1 ### LTnewLM_10 . polypeptide 495592 497034 . - . ID=LTnewLM_100018700.1:pep;Derives_from=LTnewLM_100018700.1;orthologous_to=LmjF.10.1150_mRNA;ortholog_cluster=OG0000720;product=term%3DTrichohyalin-plectin-homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13868 LTnewLM_10 Pfam protein_match 495634 496674 . - . Parent=LTnewLM_100018700.1:pep;Name=PF13868;signature_desc=Trichohyalin-plectin-homology domain ### LTnewLM_10 AUGUSTUS gene 499537 500187 1 - . ID=LTnewLM_100018800 LTnewLM_10 AUGUSTUS mRNA 499537 500187 1 - . ID=LTnewLM_100018800.1;Parent=LTnewLM_100018800 LTnewLM_10 AUGUSTUS CDS 499537 500187 1 - 0 ID=LTnewLM_100018800.1:CDS:1;Parent=LTnewLM_100018800.1 ### LTnewLM_10 . polypeptide 499537 500187 . - . ID=LTnewLM_100018800.1:pep;Derives_from=LTnewLM_100018800.1;orthologous_to=LmjF.10.1160_mRNA;ortholog_cluster=OG0000721;product=term%3DADP-ribosylation factor family/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_10 Pfam protein_match 499663 500142 . - . Parent=LTnewLM_100018800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_10 Pfam protein_match 499669 500145 . - . Parent=LTnewLM_100018800.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_10 Pfam protein_match 499801 500142 . - . Parent=LTnewLM_100018800.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_10 Pfam protein_match 499858 500142 . - . Parent=LTnewLM_100018800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_10 AUGUSTUS gene 501908 502579 1 - . ID=LTnewLM_100018900 LTnewLM_10 AUGUSTUS mRNA 501908 502579 1 - . ID=LTnewLM_100018900.1;Parent=LTnewLM_100018900 LTnewLM_10 AUGUSTUS CDS 501908 502579 1 - 0 ID=LTnewLM_100018900.1:CDS:1;Parent=LTnewLM_100018900.1 ### LTnewLM_10 . polypeptide 501908 502579 . - . ID=LTnewLM_100018900.1:pep;Derives_from=LTnewLM_100018900.1;orthologous_to=LmjF.10.1170_mRNA;ortholog_cluster=OG0000722;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_10 Pfam protein_match 502028 502558 . - . Parent=LTnewLM_100018900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_10 Pfam protein_match 502181 502564 . - . Parent=LTnewLM_100018900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_10 Pfam protein_match 502208 502558 . - . Parent=LTnewLM_100018900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_10 AUGUSTUS gene 504583 505005 1 - . ID=LTnewLM_100019000 LTnewLM_10 AUGUSTUS mRNA 504583 505005 1 - . ID=LTnewLM_100019000.1;Parent=LTnewLM_100019000 LTnewLM_10 AUGUSTUS CDS 504583 505005 1 - 0 ID=LTnewLM_100019000.1:CDS:1;Parent=LTnewLM_100019000.1 ### LTnewLM_10 . polypeptide 504583 505005 . - . ID=LTnewLM_100019000.1:pep;Derives_from=LTnewLM_100019000.1;orthologous_to=LmjF.10.1180_mRNA;ortholog_cluster=OG0000723;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 506238 506651 0.99 - . ID=LTnewLM_100019100 LTnewLM_10 AUGUSTUS mRNA 506238 506651 0.99 - . ID=LTnewLM_100019100.1;Parent=LTnewLM_100019100 LTnewLM_10 AUGUSTUS CDS 506238 506651 0.99 - 0 ID=LTnewLM_100019100.1:CDS:1;Parent=LTnewLM_100019100.1 ### LTnewLM_10 . polypeptide 506238 506651 . - . ID=LTnewLM_100019100.1:pep;Derives_from=LTnewLM_100019100.1;orthologous_to=LTnewLM_310022100.1,LTnewLM_310022300.1,LTnewLM_310022500.1,LTnewLM_310027800.1,LTnewLM_360061400.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 507017 508210 1 - . ID=LTnewLM_100019200 LTnewLM_10 AUGUSTUS mRNA 507017 508210 1 - . ID=LTnewLM_100019200.1;Parent=LTnewLM_100019200 LTnewLM_10 AUGUSTUS CDS 507017 508210 1 - 0 ID=LTnewLM_100019200.1:CDS:1;Parent=LTnewLM_100019200.1 ### LTnewLM_10 . polypeptide 507017 508210 . - . ID=LTnewLM_100019200.1:pep;Derives_from=LTnewLM_100019200.1;orthologous_to=LmjF.10.1190_mRNA;ortholog_cluster=OG0000724;product=term%3DRIB43A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05914 LTnewLM_10 Pfam protein_match 507041 508093 . - . Parent=LTnewLM_100019200.1:pep;Name=PF05914;signature_desc=RIB43A ### LTnewLM_10 AUGUSTUS gene 509460 510029 1 - . ID=LTnewLM_100019300 LTnewLM_10 AUGUSTUS mRNA 509460 510029 1 - . ID=LTnewLM_100019300.1;Parent=LTnewLM_100019300 LTnewLM_10 AUGUSTUS CDS 509460 510029 1 - 0 ID=LTnewLM_100019300.1:CDS:1;Parent=LTnewLM_100019300.1 ### LTnewLM_10 . polypeptide 509460 510029 . - . ID=LTnewLM_100019300.1:pep;Derives_from=LTnewLM_100019300.1;orthologous_to=LmjF.10.1195_mRNA;ortholog_cluster=OG0000725;product=term%3DZn-finger in Ran binding protein and others%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00641;Ontology_term=GO:0008270 LTnewLM_10 Pfam protein_match 509490 509561 . - . Parent=LTnewLM_100019300.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_10 Pfam protein_match 509724 509804 . - . Parent=LTnewLM_100019300.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 ### LTnewLM_10 AUGUSTUS gene 511434 514757 1 - . ID=LTnewLM_100019400 LTnewLM_10 AUGUSTUS mRNA 511434 514757 1 - . ID=LTnewLM_100019400.1;Parent=LTnewLM_100019400 LTnewLM_10 AUGUSTUS CDS 511434 514757 1 - 0 ID=LTnewLM_100019400.1:CDS:1;Parent=LTnewLM_100019400.1 ### LTnewLM_10 . polypeptide 511434 514757 . - . ID=LTnewLM_100019400.1:pep;Derives_from=LTnewLM_100019400.1;orthologous_to=LmjF.10.1200_mRNA;ortholog_cluster=OG0000726;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 516226 517929 1 - . ID=LTnewLM_100019500 LTnewLM_10 AUGUSTUS mRNA 516226 517929 1 - . ID=LTnewLM_100019500.1;Parent=LTnewLM_100019500 LTnewLM_10 AUGUSTUS CDS 516226 517929 1 - 0 ID=LTnewLM_100019500.1:CDS:1;Parent=LTnewLM_100019500.1 ### LTnewLM_10 . polypeptide 516226 517929 . - . ID=LTnewLM_100019500.1:pep;Derives_from=LTnewLM_100019500.1;orthologous_to=LmjF.10.1210_mRNA;ortholog_cluster=OG0000727;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 AUGUSTUS gene 519025 519945 1 - . ID=LTnewLM_100019600 LTnewLM_10 AUGUSTUS mRNA 519025 519945 1 - . ID=LTnewLM_100019600.1;Parent=LTnewLM_100019600 LTnewLM_10 AUGUSTUS CDS 519025 519945 1 - 0 ID=LTnewLM_100019600.1:CDS:1;Parent=LTnewLM_100019600.1 ### LTnewLM_10 . polypeptide 519025 519945 . - . ID=LTnewLM_100019600.1:pep;Derives_from=LTnewLM_100019600.1;orthologous_to=LmjF.10.1220_mRNA;ortholog_cluster=OG0000728;product=term%3DSpinocerebellar ataxia type 10 protein domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09759 LTnewLM_10 Pfam protein_match 519055 519351 . - . Parent=LTnewLM_100019600.1:pep;Name=PF09759;signature_desc=Spinocerebellar ataxia type 10 protein domain ### LTnewLM_10 . polypeptide 520603 521004 . - . ID=LTnewLM_100019700.1:pep;Derives_from=LTnewLM_100019700.1;orthologous_to=LTnewLM_100019700.2,LmjF.10.1225.1_mRNA;ortholog_cluster=OG0000511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . polypeptide 520603 521532 . - . ID=LTnewLM_100019700.2:pep;Derives_from=LTnewLM_100019700.2;orthologous_to=LTnewLM_100019700.1,LmjF.10.1225.1_mRNA;ortholog_cluster=OG0000511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 . pseudogene 520603 523033 . - . ID=LTnewLM_100019700:pseudogene;coverage=0.979;sequence_ID=0.875;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.1225_0;has_internal_stop=true LTnewLM_10 . pseudogenic_transcript 520603 521024 . - . ID=LTnewLM_100019700.1;Parent=LTnewLM_100019700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 520603 521004 . - . ID=LTnewLM_100019700.1:pseudogenic_exon:1;Parent=LTnewLM_100019700.1;extra_copy_number=0 LTnewLM_10 . pseudogenic_transcript 520603 523033 . - . ID=LTnewLM_100019700.2;Parent=LTnewLM_100019700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_10 . pseudogenic_exon 520603 521532 . - . ID=LTnewLM_100019700.2:pseudogenic_exon:1;Parent=LTnewLM_100019700.2;extra_copy_number=0 ### LTnewLM_10 AUGUSTUS gene 523424 524161 1 - . ID=LTnewLM_100019800 LTnewLM_10 AUGUSTUS mRNA 523424 524161 1 - . ID=LTnewLM_100019800.1;Parent=LTnewLM_100019800 LTnewLM_10 AUGUSTUS CDS 523424 524161 1 - 0 ID=LTnewLM_100019800.1:CDS:1;Parent=LTnewLM_100019800.1 ### LTnewLM_10 . polypeptide 523424 524161 . - . ID=LTnewLM_100019800.1:pep;Derives_from=LTnewLM_100019800.1;orthologous_to=LmjF.10.1227_mRNA;ortholog_cluster=OG0000729;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_10 Aragorn_1.2.36 gene 524761 524834 . + . ID=LTnewLM_100019900 LTnewLM_10 Aragorn_1.2.36 tRNA 524761 524834 . + . ID=LTnewLM_100019900:tRNA;Parent=LTnewLM_100019900;aa=Lys;anticodon=ctt;gc_content=62.2 ### LTnewLM_10 Aragorn_1.2.36 gene 524891 524961 . - . ID=LTnewLM_100020000 LTnewLM_10 Aragorn_1.2.36 tRNA 524891 524961 . - . ID=LTnewLM_100020000:tRNA;Parent=LTnewLM_100020000;aa=Gly;anticodon=gcc;gc_content=64.8 ### LTnewLM_10 Aragorn_1.2.36 gene 525021 525093 . - . ID=LTnewLM_100020100 LTnewLM_10 Aragorn_1.2.36 tRNA 525021 525093 . - . ID=LTnewLM_100020100:tRNA;Parent=LTnewLM_100020100;aa=Asn;anticodon=gtt;gc_content=60.3 ### LTnewLM_10 Liftoff gene 525368 526112 . + . ID=LTnewLM_100020200;coverage=0.985;sequence_ID=0.894;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.10.1228_0 LTnewLM_10 Liftoff mRNA 525368 526112 . + . ID=LTnewLM_100020200.1;Parent=LTnewLM_100020200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_10 Liftoff five_prime_UTR 525368 525371 . + . ID=LTnewLM_100020200:five_prime_UTR;Parent=LTnewLM_100020200.1;extra_copy_number=0 LTnewLM_10 Liftoff CDS 525372 526112 . + 0 ID=LTnewLM_100020200.1:CDS:1;Parent=LTnewLM_100020200.1;extra_copy_number=0 LTnewLM_10 Liftoff mRNA 525378 526112 . + . ID=LTnewLM_100020200.2;Parent=LTnewLM_100020200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_10 Liftoff five_prime_UTR 525378 525401 . + . ID=LTnewLM_100020200:five_prime_UTR.1;Parent=LTnewLM_100020200.2;extra_copy_number=0 LTnewLM_10 Liftoff CDS 525402 526112 . + 0 ID=LTnewLM_100020200.2:CDS:1;Parent=LTnewLM_100020200.2;extra_copy_number=0 ### LTnewLM_10 . polypeptide 525372 526112 . + . ID=LTnewLM_100020200.1:pep;Derives_from=LTnewLM_100020200.1;orthologous_to=LTnewLM_100020200.2,LmjF.10.1228.1_mRNA,LmjF.10.1228.2_mRNA;ortholog_cluster=OG0000109;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489 LTnewLM_10 Pfam protein_match 525618 526019 . + . Parent=LTnewLM_100020200.1:pep;Name=PF13489;signature_desc=Methyltransferase domain ### LTnewLM_10 . polypeptide 525402 526112 . + . ID=LTnewLM_100020200.2:pep;Derives_from=LTnewLM_100020200.2;orthologous_to=LTnewLM_100020200.1,LmjF.10.1228.1_mRNA,LmjF.10.1228.2_mRNA;ortholog_cluster=OG0000109;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_10 Pfam protein_match 525618 526019 . + . Parent=LTnewLM_100020200.2:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_10 Pfam protein_match 525798 525902 . + . Parent=LTnewLM_100020200.2:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_10 AUGUSTUS gene 526867 527853 1 + . ID=LTnewLM_100020300 LTnewLM_10 AUGUSTUS mRNA 526867 527853 1 + . ID=LTnewLM_100020300.1;Parent=LTnewLM_100020300 LTnewLM_10 AUGUSTUS CDS 526867 527853 1 + 0 ID=LTnewLM_100020300.1:CDS:1;Parent=LTnewLM_100020300.1 ### LTnewLM_10 . polypeptide 526867 527853 . + . ID=LTnewLM_100020300.1:pep;Derives_from=LTnewLM_100020300.1;orthologous_to=LmjF.10.1230_mRNA;ortholog_cluster=OG0000730;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 526936 527817 . + . Parent=LTnewLM_100020300.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 529546 530511 1 + . ID=LTnewLM_100020400 LTnewLM_10 AUGUSTUS mRNA 529546 530511 1 + . ID=LTnewLM_100020400.1;Parent=LTnewLM_100020400 LTnewLM_10 AUGUSTUS CDS 529546 530511 1 + 0 ID=LTnewLM_100020400.1:CDS:1;Parent=LTnewLM_100020400.1 ### LTnewLM_10 . polypeptide 529546 530511 . + . ID=LTnewLM_100020400.1:pep;Derives_from=LTnewLM_100020400.1;orthologous_to=LmjF.10.1240_mRNA;ortholog_cluster=OG0000731;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 529594 530475 . + . Parent=LTnewLM_100020400.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 532296 533252 1 + . ID=LTnewLM_100020500 LTnewLM_10 AUGUSTUS mRNA 532296 533252 1 + . ID=LTnewLM_100020500.1;Parent=LTnewLM_100020500 LTnewLM_10 AUGUSTUS CDS 532296 533252 1 + 0 ID=LTnewLM_100020500.1:CDS:1;Parent=LTnewLM_100020500.1 ### LTnewLM_10 . polypeptide 532296 533252 . + . ID=LTnewLM_100020500.1:pep;Derives_from=LTnewLM_100020500.1;orthologous_to=LmjF.10.1250_mRNA;ortholog_cluster=OG0000732;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 532347 533216 . + . Parent=LTnewLM_100020500.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 537573 538520 1 + . ID=LTnewLM_100020600 LTnewLM_10 AUGUSTUS mRNA 537573 538520 1 + . ID=LTnewLM_100020600.1;Parent=LTnewLM_100020600 LTnewLM_10 AUGUSTUS CDS 537573 538520 1 + 0 ID=LTnewLM_100020600.1:CDS:1;Parent=LTnewLM_100020600.1 ### LTnewLM_10 . polypeptide 537573 538520 . + . ID=LTnewLM_100020600.1:pep;Derives_from=LTnewLM_100020600.1;orthologous_to=LmjF.10.1260_mRNA;ortholog_cluster=OG0000733;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 537591 538463 . + . Parent=LTnewLM_100020600.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 539714 540655 1 + . ID=LTnewLM_100020700 LTnewLM_10 AUGUSTUS mRNA 539714 540655 1 + . ID=LTnewLM_100020700.1;Parent=LTnewLM_100020700 LTnewLM_10 AUGUSTUS CDS 539714 540655 1 + 0 ID=LTnewLM_100020700.1:CDS:1;Parent=LTnewLM_100020700.1 ### LTnewLM_10 . polypeptide 539714 540655 . + . ID=LTnewLM_100020700.1:pep;Derives_from=LTnewLM_100020700.1;orthologous_to=LmjF.10.1270_mRNA;ortholog_cluster=OG0000734;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 539741 540619 . + . Parent=LTnewLM_100020700.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 541666 542616 1 + . ID=LTnewLM_100020800 LTnewLM_10 AUGUSTUS mRNA 541666 542616 1 + . ID=LTnewLM_100020800.1;Parent=LTnewLM_100020800 LTnewLM_10 AUGUSTUS CDS 541666 542616 1 + 0 ID=LTnewLM_100020800.1:CDS:1;Parent=LTnewLM_100020800.1 ### LTnewLM_10 . polypeptide 541666 542616 . + . ID=LTnewLM_100020800.1:pep;Derives_from=LTnewLM_100020800.1;orthologous_to=LmjF.10.1280_mRNA;ortholog_cluster=OG0000735;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 541702 542580 . + . Parent=LTnewLM_100020800.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 544959 545894 1 + . ID=LTnewLM_100020900 LTnewLM_10 AUGUSTUS mRNA 544959 545894 1 + . ID=LTnewLM_100020900.1;Parent=LTnewLM_100020900 LTnewLM_10 AUGUSTUS CDS 544959 545894 1 + 0 ID=LTnewLM_100020900.1:CDS:1;Parent=LTnewLM_100020900.1 ### LTnewLM_10 . polypeptide 544959 545894 . + . ID=LTnewLM_100020900.1:pep;Derives_from=LTnewLM_100020900.1;orthologous_to=LmjF.10.1290_mRNA;ortholog_cluster=OG0000736;product=term%3DProtein of unknown function (DUF1861)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08950 LTnewLM_10 Pfam protein_match 544983 545855 . + . Parent=LTnewLM_100020900.1:pep;Name=PF08950;signature_desc=Protein of unknown function (DUF1861) ### LTnewLM_10 AUGUSTUS gene 547966 549447 1 + . ID=LTnewLM_100021000 LTnewLM_10 AUGUSTUS mRNA 547966 549447 1 + . ID=LTnewLM_100021000.1;Parent=LTnewLM_100021000 LTnewLM_10 AUGUSTUS CDS 547966 549447 1 + 0 ID=LTnewLM_100021000.1:CDS:1;Parent=LTnewLM_100021000.1 ### LTnewLM_10 . polypeptide 547966 549447 . + . ID=LTnewLM_100021000.1:pep;Derives_from=LTnewLM_100021000.1;orthologous_to=LTnewLM_100005300.1,LTnewLM_200005300.1,LmjF.10.0030_mRNA,LmjF.10.1300_mRNA;ortholog_cluster=OG0000079;product=term%3DPhosphate transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01384;Ontology_term=GO:0006817,GO:0016020,GO:0005315 LTnewLM_10 Pfam protein_match 548038 549402 . + . Parent=LTnewLM_100021000.1:pep;Name=PF01384;signature_desc=Phosphate transporter family;Ontology_term=GO:0005315,GO:0006817,GO:0016020 ### LTnewLM_10 AUGUSTUS gene 551447 553426 1 + . ID=LTnewLM_100021100 LTnewLM_10 AUGUSTUS mRNA 551447 553426 1 + . ID=LTnewLM_100021100.1;Parent=LTnewLM_100021100 LTnewLM_10 AUGUSTUS CDS 551447 553426 1 + 0 ID=LTnewLM_100021100.1:CDS:1;Parent=LTnewLM_100021100.1 ### LTnewLM_10 . polypeptide 551447 553426 . + . ID=LTnewLM_100021100.1:pep;Derives_from=LTnewLM_100021100.1;orthologous_to=LTnewLM_100005200.1,LmjF.10.0020_mRNA,LmjF.10.1310_mRNA;ortholog_cluster=OG0000107;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_10 Pfam protein_match 551675 553312 . + . Parent=LTnewLM_100021100.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_10 AUGUSTUS gene 556363 557547 1 + . ID=LTnewLM_100021200 LTnewLM_10 AUGUSTUS mRNA 556363 557547 1 + . ID=LTnewLM_100021200.1;Parent=LTnewLM_100021200 LTnewLM_10 AUGUSTUS CDS 556363 557547 1 + 0 ID=LTnewLM_100021200.1:CDS:1;Parent=LTnewLM_100021200.1 ### LTnewLM_10 . polypeptide 556363 557547 . + . ID=LTnewLM_100021200.1:pep;Derives_from=LTnewLM_100021200.1;orthologous_to=LTnewLM_100005100.1,LmjF.10.0010_mRNA,LmjF.10.1320_mRNA;ortholog_cluster=OG0000106;product=term%3DFatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487;Ontology_term=GO:0006629 LTnewLM_10 Pfam protein_match 556654 557427 . + . Parent=LTnewLM_100021200.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_11 AUGUSTUS gene 1 998 0.86 + . ID=LTnewLM_110005000;fiveEndPartial=true;Start_range=.,. LTnewLM_11 AUGUSTUS mRNA 1 998 0.86 + . ID=LTnewLM_110005000.1;Parent=LTnewLM_110005000 LTnewLM_11 AUGUSTUS CDS 871 998 0.86 + 2 ID=LTnewLM_110005000.1:CDS:1;Parent=LTnewLM_110005000.1 ### LTnewLM_11 . contig 1 581196 . + . Name=LTnewLM_CTG000010 LTnewLM_11 . polypeptide 871 998 . + . ID=LTnewLM_110005000.1:pep;Derives_from=LTnewLM_110005000.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 2920 3432 1 + . ID=LTnewLM_110005100 LTnewLM_11 AUGUSTUS mRNA 2920 3432 1 + . ID=LTnewLM_110005100.1;Parent=LTnewLM_110005100 LTnewLM_11 AUGUSTUS CDS 2920 3432 1 + 0 ID=LTnewLM_110005100.1:CDS:1;Parent=LTnewLM_110005100.1 ### LTnewLM_11 . polypeptide 2920 3432 . + . ID=LTnewLM_110005100.1:pep;Derives_from=LTnewLM_110005100.1;orthologous_to=LmjF.11.0010_mRNA;ortholog_cluster=OG0000737;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 3786 4979 1 + . ID=LTnewLM_110005200 LTnewLM_11 AUGUSTUS mRNA 3786 4979 1 + . ID=LTnewLM_110005200.1;Parent=LTnewLM_110005200 LTnewLM_11 AUGUSTUS CDS 3786 4979 1 + 0 ID=LTnewLM_110005200.1:CDS:1;Parent=LTnewLM_110005200.1 ### LTnewLM_11 . polypeptide 3786 4979 . + . ID=LTnewLM_110005200.1:pep;Derives_from=LTnewLM_110005200.1;orthologous_to=LmjF.11.0020_mRNA;ortholog_cluster=OG0000738;product=term%3DEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)/Endoplasmic reticulum vesicle transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13850|Pfam:PF07970 LTnewLM_11 Pfam protein_match 3861 4130 . + . Parent=LTnewLM_110005200.1:pep;Name=PF13850;signature_desc=Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) LTnewLM_11 Pfam protein_match 4320 4931 . + . Parent=LTnewLM_110005200.1:pep;Name=PF07970;signature_desc=Endoplasmic reticulum vesicle transporter ### LTnewLM_11 AUGUSTUS gene 5501 6424 1 + . ID=LTnewLM_110005300 LTnewLM_11 AUGUSTUS mRNA 5501 6424 1 + . ID=LTnewLM_110005300.1;Parent=LTnewLM_110005300 LTnewLM_11 AUGUSTUS CDS 5501 6424 1 + 0 ID=LTnewLM_110005300.1:CDS:1;Parent=LTnewLM_110005300.1 ### LTnewLM_11 . polypeptide 5501 6424 . + . ID=LTnewLM_110005300.1:pep;Derives_from=LTnewLM_110005300.1;orthologous_to=LmjF.11.0030_mRNA;ortholog_cluster=OG0000739;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 7110 8015 1 + . ID=LTnewLM_110005400 LTnewLM_11 AUGUSTUS mRNA 7110 8015 1 + . ID=LTnewLM_110005400.1;Parent=LTnewLM_110005400 LTnewLM_11 AUGUSTUS CDS 7110 8015 1 + 0 ID=LTnewLM_110005400.1:CDS:1;Parent=LTnewLM_110005400.1 ### LTnewLM_11 . polypeptide 7110 8015 . + . ID=LTnewLM_110005400.1:pep;Derives_from=LTnewLM_110005400.1;orthologous_to=LmjF.11.0040_mRNA;ortholog_cluster=OG0000740;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_11 Pfam protein_match 7179 7628 . + . Parent=LTnewLM_110005400.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_11 AUGUSTUS gene 8583 11459 1 + . ID=LTnewLM_110005500 LTnewLM_11 AUGUSTUS mRNA 8583 11459 1 + . ID=LTnewLM_110005500.1;Parent=LTnewLM_110005500 LTnewLM_11 AUGUSTUS CDS 8583 11459 1 + 0 ID=LTnewLM_110005500.1:CDS:1;Parent=LTnewLM_110005500.1 ### LTnewLM_11 . polypeptide 8583 11459 . + . ID=LTnewLM_110005500.1:pep;Derives_from=LTnewLM_110005500.1;orthologous_to=LmjF.11.0050_mRNA;ortholog_cluster=OG0000741;product=term%3DSNF2-related domain/Helicase conserved C-terminal domain/HNH endonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF00271|Pfam:PF01844;Ontology_term=GO:0004519,GO:0005524,GO:0003676,GO:0003677 LTnewLM_11 Pfam protein_match 9186 9833 . + . Parent=LTnewLM_110005500.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_11 Pfam protein_match 9969 10250 . + . Parent=LTnewLM_110005500.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_11 Pfam protein_match 11211 11321 . + . Parent=LTnewLM_110005500.1:pep;Name=PF01844;signature_desc=HNH endonuclease;Ontology_term=GO:0003676,GO:0004519 ### LTnewLM_11 AUGUSTUS gene 12091 15777 1 + . ID=LTnewLM_110005600 LTnewLM_11 AUGUSTUS mRNA 12091 15777 1 + . ID=LTnewLM_110005600.1;Parent=LTnewLM_110005600 LTnewLM_11 AUGUSTUS CDS 12091 15777 1 + 0 ID=LTnewLM_110005600.1:CDS:1;Parent=LTnewLM_110005600.1 ### LTnewLM_11 . polypeptide 12091 15777 . + . ID=LTnewLM_110005600.1:pep;Derives_from=LTnewLM_110005600.1;orthologous_to=LmjF.11.0060_mRNA;ortholog_cluster=OG0000742;product=term%3DRWD domain/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05773|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0005515,GO:0006468,GO:0005524 LTnewLM_11 Pfam protein_match 12223 12483 . + . Parent=LTnewLM_110005600.1:pep;Name=PF05773;signature_desc=RWD domain;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 12940 13128 . + . Parent=LTnewLM_110005600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_11 Pfam protein_match 13429 14079 . + . Parent=LTnewLM_110005600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_11 Pfam protein_match 13432 14076 . + . Parent=LTnewLM_110005600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_11 . pseudogene 17177 23103 . + . ID=LTnewLM_110005700:pseudogene;coverage=0.999;sequence_ID=0.634;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0070_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 17177 23103 . + . ID=LTnewLM_110005700.1;Parent=LTnewLM_110005700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 17177 23103 . + . ID=LTnewLM_110005700.1:pseudogenic_exon:1;Parent=LTnewLM_110005700.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 17177 23103 . + . ID=LTnewLM_110005700.1:pep;Derives_from=LTnewLM_110005700.1;orthologous_to=LmjF.11.0070_mRNA;ortholog_cluster=OG0007426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 24073 24750 1 + . ID=LTnewLM_110005800 LTnewLM_11 AUGUSTUS mRNA 24073 24750 1 + . ID=LTnewLM_110005800.1;Parent=LTnewLM_110005800 LTnewLM_11 AUGUSTUS CDS 24073 24750 1 + 0 ID=LTnewLM_110005800.1:CDS:1;Parent=LTnewLM_110005800.1 ### LTnewLM_11 . polypeptide 24073 24750 . + . ID=LTnewLM_110005800.1:pep;Derives_from=LTnewLM_110005800.1;orthologous_to=LmjF.11.0080_mRNA;ortholog_cluster=OG0000743;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_11 Pfam protein_match 24355 24522 . + . Parent=LTnewLM_110005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_11 . polypeptide 25457 25911 . + . ID=LTnewLM_110005900.1:pep;Derives_from=LTnewLM_110005900.1;orthologous_to=LTnewLM_110005900.2,LmjF.11.0090_mRNA;ortholog_cluster=OG0000312;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_11 Pfam protein_match 25649 25702 . + . Parent=LTnewLM_110005900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 25718 25777 . + . Parent=LTnewLM_110005900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 25805 25831 . + . Parent=LTnewLM_110005900.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_11 AUGUSTUS gene 25457 27457 1.33 + . ID=LTnewLM_110005900 LTnewLM_11 AUGUSTUS mRNA 25457 25911 0.33 + . ID=LTnewLM_110005900.1;Parent=LTnewLM_110005900 LTnewLM_11 AUGUSTUS CDS 25457 25851 0.52 + 0 ID=LTnewLM_110005900.1:CDS:1;Parent=LTnewLM_110005900.1 LTnewLM_11 AUGUSTUS CDS 25902 25911 0.35 + 1 ID=LTnewLM_110005900.1:CDS:2;Parent=LTnewLM_110005900.1 LTnewLM_11 AUGUSTUS mRNA 25457 27457 1 + . ID=LTnewLM_110005900.2;Parent=LTnewLM_110005900 LTnewLM_11 AUGUSTUS CDS 25457 27457 1 + 0 ID=LTnewLM_110005900.2:CDS:1;Parent=LTnewLM_110005900.2 ### LTnewLM_11 . polypeptide 25457 27457 . + . ID=LTnewLM_110005900.2:pep;Derives_from=LTnewLM_110005900.2;orthologous_to=LTnewLM_110005900.1,LmjF.11.0090_mRNA;ortholog_cluster=OG0000312;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_11 Pfam protein_match 25718 25777 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 25853 25918 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 25922 25984 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 25991 26047 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 26078 26128 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 26228 26290 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_11 Pfam protein_match 26297 26356 . + . Parent=LTnewLM_110005900.2:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_11 AUGUSTUS gene 28388 29812 1 + . ID=LTnewLM_110006000 LTnewLM_11 AUGUSTUS mRNA 28388 29812 1 + . ID=LTnewLM_110006000.1;Parent=LTnewLM_110006000 LTnewLM_11 AUGUSTUS CDS 28388 29812 1 + 0 ID=LTnewLM_110006000.1:CDS:1;Parent=LTnewLM_110006000.1 ### LTnewLM_11 . polypeptide 28388 29812 . + . ID=LTnewLM_110006000.1:pep;Derives_from=LTnewLM_110006000.1;orthologous_to=LmjF.11.0100_mRNA;ortholog_cluster=OG0000744;product=term%3DSeryl-tRNA synthetase N-terminal domain/tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02403|Pfam:PF00587;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_11 Pfam protein_match 28394 28618 . + . Parent=LTnewLM_110006000.1:pep;Name=PF02403;signature_desc=Seryl-tRNA synthetase N-terminal domain LTnewLM_11 Pfam protein_match 29135 29704 . + . Parent=LTnewLM_110006000.1:pep;Name=PF00587;signature_desc=tRNA synthetase class II core domain (G%2C H%2C P%2C S and T);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_11 AUGUSTUS gene 31316 32509 1 + . ID=LTnewLM_110006100 LTnewLM_11 AUGUSTUS mRNA 31316 32509 1 + . ID=LTnewLM_110006100.1;Parent=LTnewLM_110006100 LTnewLM_11 AUGUSTUS CDS 31316 32509 1 + 0 ID=LTnewLM_110006100.1:CDS:1;Parent=LTnewLM_110006100.1 ### LTnewLM_11 . polypeptide 31316 32509 . + . ID=LTnewLM_110006100.1:pep;Derives_from=LTnewLM_110006100.1;orthologous_to=LmjF.11.0110_mRNA;ortholog_cluster=OG0000745;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_11 Pfam protein_match 31487 32407 . + . Parent=LTnewLM_110006100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_11 Pfam protein_match 31502 32179 . + . Parent=LTnewLM_110006100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_11 Pfam protein_match 31865 32170 . + . Parent=LTnewLM_110006100.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_11 AUGUSTUS gene 33522 34091 1 + . ID=LTnewLM_110006200 LTnewLM_11 AUGUSTUS mRNA 33522 34091 1 + . ID=LTnewLM_110006200.1;Parent=LTnewLM_110006200 LTnewLM_11 AUGUSTUS CDS 33522 34091 1 + 0 ID=LTnewLM_110006200.1:CDS:1;Parent=LTnewLM_110006200.1 ### LTnewLM_11 . polypeptide 33522 34091 . + . ID=LTnewLM_110006200.1:pep;Derives_from=LTnewLM_110006200.1;orthologous_to=LmjF.11.0120_mRNA;ortholog_cluster=OG0000746;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 36008 36847 1 + . ID=LTnewLM_110006300 LTnewLM_11 AUGUSTUS mRNA 36008 36847 1 + . ID=LTnewLM_110006300.1;Parent=LTnewLM_110006300 LTnewLM_11 AUGUSTUS CDS 36008 36847 1 + 0 ID=LTnewLM_110006300.1:CDS:1;Parent=LTnewLM_110006300.1 ### LTnewLM_11 . polypeptide 36008 36847 . + . ID=LTnewLM_110006300.1:pep;Derives_from=LTnewLM_110006300.1;orthologous_to=LmjF.11.0130_mRNA;ortholog_cluster=OG0000747;product=term%3DNIF3 (NGG1p interacting factor 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01784 LTnewLM_11 Pfam protein_match 36026 36787 . + . Parent=LTnewLM_110006300.1:pep;Name=PF01784;signature_desc=NIF3 (NGG1p interacting factor 3) ### LTnewLM_11 AUGUSTUS gene 37901 38779 1 + . ID=LTnewLM_110006400 LTnewLM_11 AUGUSTUS mRNA 37901 38779 1 + . ID=LTnewLM_110006400.1;Parent=LTnewLM_110006400 LTnewLM_11 AUGUSTUS CDS 37901 38779 1 + 0 ID=LTnewLM_110006400.1:CDS:1;Parent=LTnewLM_110006400.1 ### LTnewLM_11 . polypeptide 37901 38779 . + . ID=LTnewLM_110006400.1:pep;Derives_from=LTnewLM_110006400.1;orthologous_to=LmjF.11.0140_mRNA;ortholog_cluster=OG0000748;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_11 Pfam protein_match 38510 38758 . + . Parent=LTnewLM_110006400.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_11 AUGUSTUS gene 39581 42223 1 + . ID=LTnewLM_110006500 LTnewLM_11 AUGUSTUS mRNA 39581 42223 1 + . ID=LTnewLM_110006500.1;Parent=LTnewLM_110006500 LTnewLM_11 AUGUSTUS CDS 39581 42223 1 + 0 ID=LTnewLM_110006500.1:CDS:1;Parent=LTnewLM_110006500.1 ### LTnewLM_11 . polypeptide 39581 42223 . + . ID=LTnewLM_110006500.1:pep;Derives_from=LTnewLM_110006500.1;orthologous_to=LmjF.11.0150_mRNA;ortholog_cluster=OG0000749;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 44522 47605 1 + . ID=LTnewLM_110006600 LTnewLM_11 AUGUSTUS mRNA 44522 47605 1 + . ID=LTnewLM_110006600.1;Parent=LTnewLM_110006600 LTnewLM_11 AUGUSTUS CDS 44522 47605 1 + 0 ID=LTnewLM_110006600.1:CDS:1;Parent=LTnewLM_110006600.1 ### LTnewLM_11 . polypeptide 44522 47605 . + . ID=LTnewLM_110006600.1:pep;Derives_from=LTnewLM_110006600.1;orthologous_to=LmjF.11.0160_mRNA;ortholog_cluster=OG0000750;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 48233 50386 1 + . ID=LTnewLM_110006700 LTnewLM_11 AUGUSTUS mRNA 48233 50386 1 + . ID=LTnewLM_110006700.1;Parent=LTnewLM_110006700 LTnewLM_11 AUGUSTUS CDS 48233 50386 1 + 0 ID=LTnewLM_110006700.1:CDS:1;Parent=LTnewLM_110006700.1 ### LTnewLM_11 . polypeptide 48233 50386 . + . ID=LTnewLM_110006700.1:pep;Derives_from=LTnewLM_110006700.1;orthologous_to=LmjF.11.0170_mRNA;ortholog_cluster=OG0000751;product=term%3DMyotubularin-associated protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12578 LTnewLM_11 Pfam protein_match 48257 48640 . + . Parent=LTnewLM_110006700.1:pep;Name=PF12578;signature_desc=Myotubularin-associated protein ### LTnewLM_11 AUGUSTUS gene 51036 51626 1 + . ID=LTnewLM_110006800 LTnewLM_11 AUGUSTUS mRNA 51036 51626 1 + . ID=LTnewLM_110006800.1;Parent=LTnewLM_110006800 LTnewLM_11 AUGUSTUS CDS 51036 51626 1 + 0 ID=LTnewLM_110006800.1:CDS:1;Parent=LTnewLM_110006800.1 ### LTnewLM_11 . polypeptide 51036 51626 . + . ID=LTnewLM_110006800.1:pep;Derives_from=LTnewLM_110006800.1;orthologous_to=LmjF.11.0180_mRNA;ortholog_cluster=OG0000752;product=term%3DPre-PUA-like domain/PUA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17832|Pfam:PF01472;Ontology_term=GO:0003723 LTnewLM_11 Pfam protein_match 51060 51323 . + . Parent=LTnewLM_110006800.1:pep;Name=PF17832;signature_desc=Pre-PUA-like domain LTnewLM_11 Pfam protein_match 51345 51569 . + . Parent=LTnewLM_110006800.1:pep;Name=PF01472;signature_desc=PUA domain;Ontology_term=GO:0003723 ### LTnewLM_11 AUGUSTUS gene 52427 54256 1 + . ID=LTnewLM_110006900 LTnewLM_11 AUGUSTUS mRNA 52427 54256 1 + . ID=LTnewLM_110006900.1;Parent=LTnewLM_110006900 LTnewLM_11 AUGUSTUS CDS 52427 54256 1 + 0 ID=LTnewLM_110006900.1:CDS:1;Parent=LTnewLM_110006900.1 ### LTnewLM_11 . polypeptide 52427 54256 . + . ID=LTnewLM_110006900.1:pep;Derives_from=LTnewLM_110006900.1;orthologous_to=LmjF.11.0190_mRNA;ortholog_cluster=OG0000753;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_11 Pfam protein_match 52817 53353 . + . Parent=LTnewLM_110006900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_11 Pfam protein_match 52853 53221 . + . Parent=LTnewLM_110006900.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_11 Pfam protein_match 53861 54049 . + . Parent=LTnewLM_110006900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_11 AUGUSTUS gene 55010 55564 1 + . ID=LTnewLM_110007000 LTnewLM_11 AUGUSTUS mRNA 55010 55564 1 + . ID=LTnewLM_110007000.1;Parent=LTnewLM_110007000 LTnewLM_11 AUGUSTUS CDS 55010 55564 1 + 0 ID=LTnewLM_110007000.1:CDS:1;Parent=LTnewLM_110007000.1 ### LTnewLM_11 . polypeptide 55010 55564 . + . ID=LTnewLM_110007000.1:pep;Derives_from=LTnewLM_110007000.1;orthologous_to=LmjF.11.0200_mRNA;ortholog_cluster=OG0000754;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 56501 57832 1 + . ID=LTnewLM_110007100 LTnewLM_11 AUGUSTUS mRNA 56501 57832 1 + . ID=LTnewLM_110007100.1;Parent=LTnewLM_110007100 LTnewLM_11 AUGUSTUS CDS 56501 57832 1 + 0 ID=LTnewLM_110007100.1:CDS:1;Parent=LTnewLM_110007100.1 ### LTnewLM_11 . polypeptide 56501 57832 . + . ID=LTnewLM_110007100.1:pep;Derives_from=LTnewLM_110007100.1;orthologous_to=LmjF.11.0210_mRNA;ortholog_cluster=OG0000755;product=term%3DInorganic pyrophosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00719;Ontology_term=GO:0006796,GO:0000287,GO:0005737,GO:0004427 LTnewLM_11 Pfam protein_match 57263 57793 . + . Parent=LTnewLM_110007100.1:pep;Name=PF00719;signature_desc=Inorganic pyrophosphatase;Ontology_term=GO:0000287,GO:0004427,GO:0006796,GO:0005737 ### LTnewLM_11 AUGUSTUS gene 60841 61047 1 + . ID=LTnewLM_110007200 LTnewLM_11 AUGUSTUS mRNA 60841 61047 1 + . ID=LTnewLM_110007200.1;Parent=LTnewLM_110007200 LTnewLM_11 AUGUSTUS CDS 60841 61047 1 + 0 ID=LTnewLM_110007200.1:CDS:1;Parent=LTnewLM_110007200.1 ### LTnewLM_11 . polypeptide 60841 61047 . + . ID=LTnewLM_110007200.1:pep;Derives_from=LTnewLM_110007200.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 61731 62066 1 + . ID=LTnewLM_110007300 LTnewLM_11 AUGUSTUS mRNA 61731 62066 1 + . ID=LTnewLM_110007300.1;Parent=LTnewLM_110007300 LTnewLM_11 AUGUSTUS CDS 61731 62066 1 + 0 ID=LTnewLM_110007300.1:CDS:1;Parent=LTnewLM_110007300.1 ### LTnewLM_11 . polypeptide 61731 62066 . + . ID=LTnewLM_110007300.1:pep;Derives_from=LTnewLM_110007300.1;orthologous_to=LmjF.11.0220_mRNA;ortholog_cluster=OG0000756;product=term%3DPterin 4 alpha carbinolamine dehydratase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01329;Ontology_term=GO:0008124,GO:0006729 LTnewLM_11 Pfam protein_match 61767 62036 . + . Parent=LTnewLM_110007300.1:pep;Name=PF01329;signature_desc=Pterin 4 alpha carbinolamine dehydratase;Ontology_term=GO:0008124,GO:0006729 ### LTnewLM_11 AUGUSTUS gene 62508 64268 1 + . ID=LTnewLM_110007400 LTnewLM_11 AUGUSTUS mRNA 62508 64268 1 + . ID=LTnewLM_110007400.1;Parent=LTnewLM_110007400 LTnewLM_11 AUGUSTUS CDS 62508 64268 1 + 0 ID=LTnewLM_110007400.1:CDS:1;Parent=LTnewLM_110007400.1 ### LTnewLM_11 . polypeptide 62508 64268 . + . ID=LTnewLM_110007400.1:pep;Derives_from=LTnewLM_110007400.1;orthologous_to=LmjF.11.0230_mRNA;ortholog_cluster=OG0000757;product=term%3DRad51/AAA domain/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08423|Pfam:PF13481|Pfam:PF00004;Ontology_term=GO:0005524 LTnewLM_11 Pfam protein_match 63102 63671 . + . Parent=LTnewLM_110007400.1:pep;Name=PF08423;signature_desc=Rad51 LTnewLM_11 Pfam protein_match 63177 63659 . + . Parent=LTnewLM_110007400.1:pep;Name=PF13481;signature_desc=AAA domain LTnewLM_11 Pfam protein_match 63213 63695 . + . Parent=LTnewLM_110007400.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_11 AUGUSTUS gene 65206 65949 1 + . ID=LTnewLM_110007500 LTnewLM_11 AUGUSTUS mRNA 65206 65949 1 + . ID=LTnewLM_110007500.1;Parent=LTnewLM_110007500 LTnewLM_11 AUGUSTUS CDS 65206 65949 1 + 0 ID=LTnewLM_110007500.1:CDS:1;Parent=LTnewLM_110007500.1 ### LTnewLM_11 . polypeptide 65206 65949 . + . ID=LTnewLM_110007500.1:pep;Derives_from=LTnewLM_110007500.1;orthologous_to=LmjF.11.0240_mRNA;ortholog_cluster=OG0000758;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_11 Pfam protein_match 65212 65277 . + . Parent=LTnewLM_110007500.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 LTnewLM_11 Pfam protein_match 65281 65826 . + . Parent=LTnewLM_110007500.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_11 AUGUSTUS gene 67289 70345 1 + . ID=LTnewLM_110007600 LTnewLM_11 AUGUSTUS mRNA 67289 70345 1 + . ID=LTnewLM_110007600.1;Parent=LTnewLM_110007600 LTnewLM_11 AUGUSTUS CDS 67289 70345 1 + 0 ID=LTnewLM_110007600.1:CDS:1;Parent=LTnewLM_110007600.1 ### LTnewLM_11 . polypeptide 67289 70345 . + . ID=LTnewLM_110007600.1:pep;Derives_from=LTnewLM_110007600.1;orthologous_to=LmjF.11.0250_mRNA;ortholog_cluster=OG0000759;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_11 Pfam protein_match 69158 69574 . + . Parent=LTnewLM_110007600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_11 Pfam protein_match 69161 69577 . + . Parent=LTnewLM_110007600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_11 AUGUSTUS gene 72289 74073 1 + . ID=LTnewLM_110007700 LTnewLM_11 AUGUSTUS mRNA 72289 74073 1 + . ID=LTnewLM_110007700.1;Parent=LTnewLM_110007700 LTnewLM_11 AUGUSTUS CDS 72289 74073 1 + 0 ID=LTnewLM_110007700.1:CDS:1;Parent=LTnewLM_110007700.1 ### LTnewLM_11 . polypeptide 72289 74073 . + . ID=LTnewLM_110007700.1:pep;Derives_from=LTnewLM_110007700.1;orthologous_to=LmjF.11.0260_mRNA;ortholog_cluster=OG0000760;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 74813 76069 1 + . ID=LTnewLM_110007800 LTnewLM_11 AUGUSTUS mRNA 74813 76069 1 + . ID=LTnewLM_110007800.1;Parent=LTnewLM_110007800 LTnewLM_11 AUGUSTUS CDS 74813 76069 1 + 0 ID=LTnewLM_110007800.1:CDS:1;Parent=LTnewLM_110007800.1 ### LTnewLM_11 . polypeptide 74813 76069 . + . ID=LTnewLM_110007800.1:pep;Derives_from=LTnewLM_110007800.1;orthologous_to=LmjF.11.0270_mRNA;ortholog_cluster=OG0000761;product=term%3DOxidoreductase FAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970 LTnewLM_11 Pfam protein_match 75212 75457 . + . Parent=LTnewLM_110007800.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_11 AUGUSTUS gene 77163 77615 1 + . ID=LTnewLM_110007900 LTnewLM_11 AUGUSTUS mRNA 77163 77615 1 + . ID=LTnewLM_110007900.1;Parent=LTnewLM_110007900 LTnewLM_11 AUGUSTUS CDS 77163 77615 1 + 0 ID=LTnewLM_110007900.1:CDS:1;Parent=LTnewLM_110007900.1 ### LTnewLM_11 . polypeptide 77163 77615 . + . ID=LTnewLM_110007900.1:pep;Derives_from=LTnewLM_110007900.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 78631 79230 0.93 + . ID=LTnewLM_110008000 LTnewLM_11 AUGUSTUS mRNA 78631 79230 0.93 + . ID=LTnewLM_110008000.1;Parent=LTnewLM_110008000 LTnewLM_11 AUGUSTUS CDS 78631 79230 0.93 + 0 ID=LTnewLM_110008000.1:CDS:1;Parent=LTnewLM_110008000.1 ### LTnewLM_11 . polypeptide 78631 79230 . + . ID=LTnewLM_110008000.1:pep;Derives_from=LTnewLM_110008000.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 79632 80294 0.5 + . ID=LTnewLM_110008100 LTnewLM_11 AUGUSTUS mRNA 79632 80294 0.5 + . ID=LTnewLM_110008100.1;Parent=LTnewLM_110008100 LTnewLM_11 AUGUSTUS CDS 79632 79684 0.7 + 0 ID=LTnewLM_110008100.1:CDS:1;Parent=LTnewLM_110008100.1 LTnewLM_11 AUGUSTUS CDS 79733 80294 0.56 + 1 ID=LTnewLM_110008100.1:CDS:2;Parent=LTnewLM_110008100.1 ### LTnewLM_11 . polypeptide 79632 80294 . + . ID=LTnewLM_110008100.1:pep;Derives_from=LTnewLM_110008100.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 80519 81055 0.88 + . ID=LTnewLM_110008200 LTnewLM_11 AUGUSTUS mRNA 80519 81055 0.88 + . ID=LTnewLM_110008200.1;Parent=LTnewLM_110008200 LTnewLM_11 AUGUSTUS CDS 80519 80714 0.88 + 0 ID=LTnewLM_110008200.1:CDS:1;Parent=LTnewLM_110008200.1 LTnewLM_11 AUGUSTUS CDS 80877 81055 1 + 2 ID=LTnewLM_110008200.1:CDS:2;Parent=LTnewLM_110008200.1 ### LTnewLM_11 . polypeptide 80519 81055 . + . ID=LTnewLM_110008200.1:pep;Derives_from=LTnewLM_110008200.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 81890 83299 1 + . ID=LTnewLM_110008300 LTnewLM_11 AUGUSTUS mRNA 81890 83299 1 + . ID=LTnewLM_110008300.1;Parent=LTnewLM_110008300 LTnewLM_11 AUGUSTUS CDS 81890 83299 1 + 0 ID=LTnewLM_110008300.1:CDS:1;Parent=LTnewLM_110008300.1 ### LTnewLM_11 . polypeptide 81890 83299 . + . ID=LTnewLM_110008300.1:pep;Derives_from=LTnewLM_110008300.1;orthologous_to=LmjF.11.0290_mRNA;ortholog_cluster=OG0000762;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 84104 84928 1 + . ID=LTnewLM_110008400 LTnewLM_11 AUGUSTUS mRNA 84104 84928 1 + . ID=LTnewLM_110008400.1;Parent=LTnewLM_110008400 LTnewLM_11 AUGUSTUS CDS 84104 84928 1 + 0 ID=LTnewLM_110008400.1:CDS:1;Parent=LTnewLM_110008400.1 ### LTnewLM_11 . polypeptide 84104 84928 . + . ID=LTnewLM_110008400.1:pep;Derives_from=LTnewLM_110008400.1;orthologous_to=LmjF.11.0300_mRNA;ortholog_cluster=OG0000763;product=term%3DSec20%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03908 LTnewLM_11 Pfam protein_match 84626 84877 . + . Parent=LTnewLM_110008400.1:pep;Name=PF03908;signature_desc=Sec20 ### LTnewLM_11 . polypeptide 85420 86176 . + . ID=LTnewLM_110008500.1:pep;Derives_from=LTnewLM_110008500.1;orthologous_to=LTnewLM_110008500.2,LmjF.11.0310_mRNA;ortholog_cluster=OG0000313;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 85420 91500 1.55 + . ID=LTnewLM_110008500 LTnewLM_11 AUGUSTUS mRNA 85420 86176 0.55 + . ID=LTnewLM_110008500.1;Parent=LTnewLM_110008500 LTnewLM_11 AUGUSTUS CDS 85420 86115 0.86 + 0 ID=LTnewLM_110008500.1:CDS:1;Parent=LTnewLM_110008500.1 LTnewLM_11 AUGUSTUS CDS 86159 86176 0.55 + 0 ID=LTnewLM_110008500.1:CDS:2;Parent=LTnewLM_110008500.1 LTnewLM_11 AUGUSTUS mRNA 85420 91500 1 + . ID=LTnewLM_110008500.2;Parent=LTnewLM_110008500 LTnewLM_11 AUGUSTUS CDS 85420 91500 1 + 0 ID=LTnewLM_110008500.2:CDS:1;Parent=LTnewLM_110008500.2 ### LTnewLM_11 . polypeptide 85420 91500 . + . ID=LTnewLM_110008500.2:pep;Derives_from=LTnewLM_110008500.2;orthologous_to=LTnewLM_110008500.1,LmjF.11.0310_mRNA;ortholog_cluster=OG0000313;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 Liftoff gene 95246 100000 . + . ID=LTnewLM_110008600;coverage=0.999;sequence_ID=0.953;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.11.0320_0 LTnewLM_11 Liftoff mRNA 95246 100000 . + . ID=LTnewLM_110008600.1;Parent=LTnewLM_110008600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 95246 100000 . + 0 ID=LTnewLM_110008600.1:CDS:1;Parent=LTnewLM_110008600.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 95246 100000 . + . ID=LTnewLM_110008600.1:pep;Derives_from=LTnewLM_110008600.1;orthologous_to=LmjF.11.0320_mRNA;ortholog_cluster=OG0000764;product=term%3DPIF1-like helicase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05970|Pfam:PF13604;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_11 Pfam protein_match 97751 98161 . + . Parent=LTnewLM_110008600.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_11 Pfam protein_match 97751 98338 . + . Parent=LTnewLM_110008600.1:pep;Name=PF13604;signature_desc=AAA domain ### LTnewLM_11 AUGUSTUS gene 102299 105943 1 + . ID=LTnewLM_110008700 LTnewLM_11 AUGUSTUS mRNA 102299 105943 1 + . ID=LTnewLM_110008700.1;Parent=LTnewLM_110008700 LTnewLM_11 AUGUSTUS CDS 102299 105943 1 + 0 ID=LTnewLM_110008700.1:CDS:1;Parent=LTnewLM_110008700.1 ### LTnewLM_11 . polypeptide 102299 105943 . + . ID=LTnewLM_110008700.1:pep;Derives_from=LTnewLM_110008700.1;orthologous_to=LmjF.11.0330_mRNA;ortholog_cluster=OG0000765;product=term%3DAAA domain/PIF1-like helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13604|Pfam:PF05970;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_11 Pfam protein_match 103583 104122 . + . Parent=LTnewLM_110008700.1:pep;Name=PF13604;signature_desc=AAA domain LTnewLM_11 Pfam protein_match 103586 104077 . + . Parent=LTnewLM_110008700.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 ### LTnewLM_11 AUGUSTUS gene 107805 109304 1 + . ID=LTnewLM_110008800 LTnewLM_11 AUGUSTUS mRNA 107805 109304 1 + . ID=LTnewLM_110008800.1;Parent=LTnewLM_110008800 LTnewLM_11 AUGUSTUS CDS 107805 109304 1 + 0 ID=LTnewLM_110008800.1:CDS:1;Parent=LTnewLM_110008800.1 ### LTnewLM_11 . polypeptide 107805 109304 . + . ID=LTnewLM_110008800.1:pep;Derives_from=LTnewLM_110008800.1;orthologous_to=LmjF.11.0340_mRNA;ortholog_cluster=OG0000766;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 110162 110923 1 + . ID=LTnewLM_110008900 LTnewLM_11 AUGUSTUS mRNA 110162 110923 1 + . ID=LTnewLM_110008900.1;Parent=LTnewLM_110008900 LTnewLM_11 AUGUSTUS CDS 110162 110923 1 + 0 ID=LTnewLM_110008900.1:CDS:1;Parent=LTnewLM_110008900.1 ### LTnewLM_11 . polypeptide 110162 110923 . + . ID=LTnewLM_110008900.1:pep;Derives_from=LTnewLM_110008900.1;orthologous_to=LmjF.11.0350_mRNA;ortholog_cluster=OG0000767;product=term%3D14-3-3 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00244 LTnewLM_11 Pfam protein_match 110213 110863 . + . Parent=LTnewLM_110008900.1:pep;Name=PF00244;signature_desc=14-3-3 protein ### LTnewLM_11 AUGUSTUS gene 112853 114049 1 + . ID=LTnewLM_110009000 LTnewLM_11 AUGUSTUS mRNA 112853 114049 1 + . ID=LTnewLM_110009000.1;Parent=LTnewLM_110009000 LTnewLM_11 AUGUSTUS CDS 112853 114049 1 + 0 ID=LTnewLM_110009000.1:CDS:1;Parent=LTnewLM_110009000.1 ### LTnewLM_11 . polypeptide 112853 114049 . + . ID=LTnewLM_110009000.1:pep;Derives_from=LTnewLM_110009000.1;orthologous_to=LmjF.11.0360_mRNA;ortholog_cluster=OG0000768;product=term%3DOptic atrophy 3 protein (OPA3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07047 LTnewLM_11 Pfam protein_match 112871 113656 . + . Parent=LTnewLM_110009000.1:pep;Name=PF07047;signature_desc=Optic atrophy 3 protein (OPA3) ### LTnewLM_11 AUGUSTUS gene 115294 117321 1 + . ID=LTnewLM_110009100 LTnewLM_11 AUGUSTUS mRNA 115294 117321 1 + . ID=LTnewLM_110009100.1;Parent=LTnewLM_110009100 LTnewLM_11 AUGUSTUS CDS 115294 117321 1 + 0 ID=LTnewLM_110009100.1:CDS:1;Parent=LTnewLM_110009100.1 ### LTnewLM_11 . polypeptide 115294 117321 . + . ID=LTnewLM_110009100.1:pep;Derives_from=LTnewLM_110009100.1;orthologous_to=LmjF.11.0370_mRNA;ortholog_cluster=OG0000769;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 119229 122600 1 + . ID=LTnewLM_110009200 LTnewLM_11 AUGUSTUS mRNA 119229 122600 1 + . ID=LTnewLM_110009200.1;Parent=LTnewLM_110009200 LTnewLM_11 AUGUSTUS CDS 119229 122600 1 + 0 ID=LTnewLM_110009200.1:CDS:1;Parent=LTnewLM_110009200.1 ### LTnewLM_11 . polypeptide 119229 122600 . + . ID=LTnewLM_110009200.1:pep;Derives_from=LTnewLM_110009200.1;orthologous_to=LmjF.11.0380_mRNA;ortholog_cluster=OG0000770;product=term%3DDomain of unknown function(DUF2779)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11074 LTnewLM_11 Pfam protein_match 121506 122075 . + . Parent=LTnewLM_110009200.1:pep;Name=PF11074;signature_desc=Domain of unknown function(DUF2779) ### LTnewLM_11 AUGUSTUS gene 123935 125647 1 + . ID=LTnewLM_110009300 LTnewLM_11 AUGUSTUS mRNA 123935 125647 1 + . ID=LTnewLM_110009300.1;Parent=LTnewLM_110009300 LTnewLM_11 AUGUSTUS CDS 123935 125647 1 + 0 ID=LTnewLM_110009300.1:CDS:1;Parent=LTnewLM_110009300.1 ### LTnewLM_11 . polypeptide 123935 125647 . + . ID=LTnewLM_110009300.1:pep;Derives_from=LTnewLM_110009300.1;orthologous_to=LmjF.11.0390_mRNA;ortholog_cluster=OG0000771;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 129281 133336 1 + . ID=LTnewLM_110009400 LTnewLM_11 AUGUSTUS mRNA 129281 133336 1 + . ID=LTnewLM_110009400.1;Parent=LTnewLM_110009400 LTnewLM_11 AUGUSTUS CDS 129281 133336 1 + 0 ID=LTnewLM_110009400.1:CDS:1;Parent=LTnewLM_110009400.1 ### LTnewLM_11 . polypeptide 129281 133336 . + . ID=LTnewLM_110009400.1:pep;Derives_from=LTnewLM_110009400.1;orthologous_to=LmjF.11.0400_mRNA;ortholog_cluster=OG0000772;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_11 Pfam protein_match 130805 131677 . + . Parent=LTnewLM_110009400.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_11 AUGUSTUS gene 135183 137732 1 + . ID=LTnewLM_110009500 LTnewLM_11 AUGUSTUS mRNA 135183 137732 1 + . ID=LTnewLM_110009500.1;Parent=LTnewLM_110009500 LTnewLM_11 AUGUSTUS CDS 135183 137732 1 + 0 ID=LTnewLM_110009500.1:CDS:1;Parent=LTnewLM_110009500.1 ### LTnewLM_11 . polypeptide 135183 137732 . + . ID=LTnewLM_110009500.1:pep;Derives_from=LTnewLM_110009500.1;orthologous_to=LmjF.11.0410_mRNA;ortholog_cluster=OG0000773;product=term%3DBOP1NT (NUC169) domain/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08145|Pfam:PF00400;Ontology_term=GO:0006364,GO:0005515 LTnewLM_11 Pfam protein_match 135774 136565 . + . Parent=LTnewLM_110009500.1:pep;Name=PF08145;signature_desc=BOP1NT (NUC169) domain;Ontology_term=GO:0006364 LTnewLM_11 Pfam protein_match 136572 136679 . + . Parent=LTnewLM_110009500.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 137622 137720 . + . Parent=LTnewLM_110009500.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_11 AUGUSTUS gene 138940 141270 1 + . ID=LTnewLM_110009600 LTnewLM_11 AUGUSTUS mRNA 138940 141270 1 + . ID=LTnewLM_110009600.1;Parent=LTnewLM_110009600 LTnewLM_11 AUGUSTUS CDS 138940 141270 1 + 0 ID=LTnewLM_110009600.1:CDS:1;Parent=LTnewLM_110009600.1 ### LTnewLM_11 . polypeptide 138940 141270 . + . ID=LTnewLM_110009600.1:pep;Derives_from=LTnewLM_110009600.1;orthologous_to=LmjF.11.0420_mRNA;ortholog_cluster=OG0000774;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_11 Pfam protein_match 139009 139167 . + . Parent=LTnewLM_110009600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_11 Pfam protein_match 139129 139212 . + . Parent=LTnewLM_110009600.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_11 Pfam protein_match 139183 139425 . + . Parent=LTnewLM_110009600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_11 . polypeptide 142129 144178 . + . ID=LTnewLM_110009700.1:pep;Derives_from=LTnewLM_110009700.1;orthologous_to=LTnewLM_110009700.2,LmjF.11.0430_mRNA;ortholog_cluster=OG0000314;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 142129 144687 0.55 + . ID=LTnewLM_110009700 LTnewLM_11 AUGUSTUS mRNA 142129 144178 0.25 + . ID=LTnewLM_110009700.1;Parent=LTnewLM_110009700 LTnewLM_11 AUGUSTUS CDS 142129 144059 0.32 + 0 ID=LTnewLM_110009700.1:CDS:1;Parent=LTnewLM_110009700.1 LTnewLM_11 AUGUSTUS CDS 144172 144178 0.44 + 1 ID=LTnewLM_110009700.1:CDS:2;Parent=LTnewLM_110009700.1 LTnewLM_11 AUGUSTUS mRNA 142129 144687 0.3 + . ID=LTnewLM_110009700.2;Parent=LTnewLM_110009700 LTnewLM_11 AUGUSTUS CDS 142129 144687 0.3 + 0 ID=LTnewLM_110009700.2:CDS:1;Parent=LTnewLM_110009700.2 ### LTnewLM_11 . polypeptide 142129 144687 . + . ID=LTnewLM_110009700.2:pep;Derives_from=LTnewLM_110009700.2;orthologous_to=LTnewLM_110009700.1,LmjF.11.0430_mRNA;ortholog_cluster=OG0000314;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 145845 147587 1 + . ID=LTnewLM_110009800 LTnewLM_11 AUGUSTUS mRNA 145845 147587 1 + . ID=LTnewLM_110009800.1;Parent=LTnewLM_110009800 LTnewLM_11 AUGUSTUS CDS 145845 147587 1 + 0 ID=LTnewLM_110009800.1:CDS:1;Parent=LTnewLM_110009800.1 ### LTnewLM_11 . polypeptide 145845 147587 . + . ID=LTnewLM_110009800.1:pep;Derives_from=LTnewLM_110009800.1;orthologous_to=LmjF.11.0440_mRNA;ortholog_cluster=OG0000775;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_11 Pfam protein_match 145995 146042 . + . Parent=LTnewLM_110009800.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_11 Pfam protein_match 146130 146171 . + . Parent=LTnewLM_110009800.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_11 AUGUSTUS gene 148364 150652 1 + . ID=LTnewLM_110009900 LTnewLM_11 AUGUSTUS mRNA 148364 150652 1 + . ID=LTnewLM_110009900.1;Parent=LTnewLM_110009900 LTnewLM_11 AUGUSTUS CDS 148364 150652 1 + 0 ID=LTnewLM_110009900.1:CDS:1;Parent=LTnewLM_110009900.1 ### LTnewLM_11 . polypeptide 148364 150652 . + . ID=LTnewLM_110009900.1:pep;Derives_from=LTnewLM_110009900.1;orthologous_to=LmjF.11.0450_mRNA;ortholog_cluster=OG0000776;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 151140 153071 1 + . ID=LTnewLM_110010000 LTnewLM_11 AUGUSTUS mRNA 151140 153071 1 + . ID=LTnewLM_110010000.1;Parent=LTnewLM_110010000 LTnewLM_11 AUGUSTUS CDS 151140 153071 1 + 0 ID=LTnewLM_110010000.1:CDS:1;Parent=LTnewLM_110010000.1 ### LTnewLM_11 . polypeptide 151140 153071 . + . ID=LTnewLM_110010000.1:pep;Derives_from=LTnewLM_110010000.1;orthologous_to=LmjF.11.0460_mRNA;ortholog_cluster=OG0000777;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 153684 155915 1 + . ID=LTnewLM_110010100 LTnewLM_11 AUGUSTUS mRNA 153684 155915 1 + . ID=LTnewLM_110010100.1;Parent=LTnewLM_110010100 LTnewLM_11 AUGUSTUS CDS 153684 155915 1 + 0 ID=LTnewLM_110010100.1:CDS:1;Parent=LTnewLM_110010100.1 ### LTnewLM_11 . polypeptide 153684 155915 . + . ID=LTnewLM_110010100.1:pep;Derives_from=LTnewLM_110010100.1;orthologous_to=LmjF.11.0470_mRNA;ortholog_cluster=OG0000778;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 GenomeTools gene 159207 159325 93 - . ID=LTnewLM_110010200 LTnewLM_11 INFERNAL rRNA 159207 159325 93 - . ID=LTnewLM_110010200:rRNA;Parent=LTnewLM_110010200;gc=0.50;evalue=1.9e-20;score=93.0;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_11 Liftoff gene 159207 159326 . - . ID=LTnewLM_110010300;coverage=1.0;sequence_ID=0.991;extra_copy_number=0;copy_num_ID=LmjF.23.5SrRNA.01_0 LTnewLM_11 Liftoff rRNA 159207 159326 . - . ID=LTnewLM_110010300:rRNA;Parent=LTnewLM_110010300;extra_copy_number=0 ### LTnewLM_11 Aragorn_1.2.36 gene 159375 159457 . - . ID=LTnewLM_110010400 LTnewLM_11 Aragorn_1.2.36 tRNA 159375 159457 . - . ID=LTnewLM_110010400:tRNA;Parent=LTnewLM_110010400;aa=Leu;anticodon=aag;gc_content=51.8 ### LTnewLM_11 Aragorn_1.2.36 gene 159531 159603 . + . ID=LTnewLM_110010500 LTnewLM_11 Aragorn_1.2.36 tRNA 159531 159603 . + . ID=LTnewLM_110010500:tRNA;Parent=LTnewLM_110010500;aa=Ala;anticodon=cgc;gc_content=60.3 ### LTnewLM_11 Aragorn_1.2.36 gene 165050 165121 . - . ID=LTnewLM_110010600 LTnewLM_11 Aragorn_1.2.36 tRNA 165050 165121 . - . ID=LTnewLM_110010600:tRNA;Parent=LTnewLM_110010600;aa=Gly;anticodon=ccc;gc_content=65.3 ### LTnewLM_11 Aragorn_1.2.36 gene 165179 165251 . - . ID=LTnewLM_110010700 LTnewLM_11 Aragorn_1.2.36 tRNA 165179 165251 . - . ID=LTnewLM_110010700:tRNA;Parent=LTnewLM_110010700;aa=Ala;anticodon=cgc;gc_content=60.3 ### LTnewLM_11 Aragorn_1.2.36 gene 165325 165406 . + . ID=LTnewLM_110010800 LTnewLM_11 Aragorn_1.2.36 tRNA 165325 165406 . + . ID=LTnewLM_110010800:tRNA;Parent=LTnewLM_110010800;aa=Leu;anticodon=aag;gc_content=51.2 ### LTnewLM_11 Liftoff gene 165456 165575 . + . ID=LTnewLM_110010900;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.11.5SRRNA.02_0 LTnewLM_11 Liftoff rRNA 165456 165575 . + . ID=LTnewLM_110010900:rRNA;Parent=LTnewLM_110010900;extra_copy_number=0 ### LTnewLM_11 GenomeTools gene 165457 165575 93 + . ID=LTnewLM_110011000 LTnewLM_11 INFERNAL rRNA 165457 165575 93 + . ID=LTnewLM_110011000:rRNA;Parent=LTnewLM_110011000;gc=0.50;evalue=1.9e-20;score=93.0;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_11 AUGUSTUS gene 167629 170811 1 + . ID=LTnewLM_110011100 LTnewLM_11 AUGUSTUS mRNA 167629 170811 1 + . ID=LTnewLM_110011100.1;Parent=LTnewLM_110011100 LTnewLM_11 AUGUSTUS CDS 167629 170811 1 + 0 ID=LTnewLM_110011100.1:CDS:1;Parent=LTnewLM_110011100.1 ### LTnewLM_11 . polypeptide 167629 170811 . + . ID=LTnewLM_110011100.1:pep;Derives_from=LTnewLM_110011100.1;orthologous_to=LmjF.11.0480_mRNA;ortholog_cluster=OG0000779;product=term%3DmRNA capping enzyme/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03291|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_11 Pfam protein_match 170053 170679 . + . Parent=LTnewLM_110011100.1:pep;Name=PF03291;signature_desc=mRNA capping enzyme LTnewLM_11 Pfam protein_match 170095 170421 . + . Parent=LTnewLM_110011100.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_11 Pfam protein_match 170098 170427 . + . Parent=LTnewLM_110011100.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_11 AUGUSTUS gene 171780 173003 1 + . ID=LTnewLM_110011200 LTnewLM_11 AUGUSTUS mRNA 171780 173003 1 + . ID=LTnewLM_110011200.1;Parent=LTnewLM_110011200 LTnewLM_11 AUGUSTUS CDS 171780 173003 1 + 0 ID=LTnewLM_110011200.1:CDS:1;Parent=LTnewLM_110011200.1 ### LTnewLM_11 . polypeptide 171780 173003 . + . ID=LTnewLM_110011200.1:pep;Derives_from=LTnewLM_110011200.1;orthologous_to=LmjF.11.0490_mRNA;ortholog_cluster=OG0000780;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07719|Pfam:PF13181|Pfam:PF13176;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 171999 172091 . + . Parent=LTnewLM_110011200.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_11 Pfam protein_match 172032 172091 . + . Parent=LTnewLM_110011200.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 172332 172409 . + . Parent=LTnewLM_110011200.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_11 Pfam protein_match 172332 172415 . + . Parent=LTnewLM_110011200.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 172335 172418 . + . Parent=LTnewLM_110011200.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_11 AUGUSTUS gene 173617 174015 1 + . ID=LTnewLM_110011300 LTnewLM_11 AUGUSTUS mRNA 173617 174015 1 + . ID=LTnewLM_110011300.1;Parent=LTnewLM_110011300 LTnewLM_11 AUGUSTUS CDS 173617 174015 1 + 0 ID=LTnewLM_110011300.1:CDS:1;Parent=LTnewLM_110011300.1 ### LTnewLM_11 . polypeptide 173617 174015 . + . ID=LTnewLM_110011300.1:pep;Derives_from=LTnewLM_110011300.1;orthologous_to=LmjF.11.0500_mRNA;ortholog_cluster=OG0000781;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 176949 178685 1 + . ID=LTnewLM_110011400 LTnewLM_11 AUGUSTUS mRNA 176949 178685 1 + . ID=LTnewLM_110011400.1;Parent=LTnewLM_110011400 LTnewLM_11 AUGUSTUS CDS 176949 178685 1 + 0 ID=LTnewLM_110011400.1:CDS:1;Parent=LTnewLM_110011400.1 ### LTnewLM_11 . polypeptide 176949 178685 . + . ID=LTnewLM_110011400.1:pep;Derives_from=LTnewLM_110011400.1;orthologous_to=LmjF.11.0510_mRNA;ortholog_cluster=OG0000782;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_11 Pfam protein_match 177552 178274 . + . Parent=LTnewLM_110011400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_11 Pfam protein_match 177639 178652 . + . Parent=LTnewLM_110011400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_11 Liftoff gene 182303 184018 . + . ID=LTnewLM_110011500;coverage=1.0;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.11.0520_0 LTnewLM_11 Liftoff mRNA 182303 184018 . + . ID=LTnewLM_110011500.1;Parent=LTnewLM_110011500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 182303 184018 . + 0 ID=LTnewLM_110011500.1:CDS:1;Parent=LTnewLM_110011500.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 182303 184018 . + . ID=LTnewLM_110011500.1:pep;Derives_from=LTnewLM_110011500.1;orthologous_to=LmjF.11.0520_mRNA;ortholog_cluster=OG0000783;product=term%3DAmino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13520;Ontology_term=GO:0016020,GO:0015171,GO:0003333 LTnewLM_11 Pfam protein_match 182606 183787 . + . Parent=LTnewLM_110011500.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 ### LTnewLM_11 . pseudogene 185370 187738 . + . ID=LTnewLM_110011600:pseudogene;coverage=0.988;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0530_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 185370 187738 . + . ID=LTnewLM_110011600.1;Parent=LTnewLM_110011600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 185370 187738 . + . ID=LTnewLM_110011600.1:pseudogenic_exon:1;Parent=LTnewLM_110011600.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 185370 187738 . + . ID=LTnewLM_110011600.1:pep;Derives_from=LTnewLM_110011600.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 188516 190459 1 + . ID=LTnewLM_110011700 LTnewLM_11 AUGUSTUS mRNA 188516 190459 1 + . ID=LTnewLM_110011700.1;Parent=LTnewLM_110011700 LTnewLM_11 AUGUSTUS CDS 188516 190459 1 + 0 ID=LTnewLM_110011700.1:CDS:1;Parent=LTnewLM_110011700.1 ### LTnewLM_11 . polypeptide 188516 190459 . + . ID=LTnewLM_110011700.1:pep;Derives_from=LTnewLM_110011700.1;orthologous_to=LmjF.11.0540_mRNA;ortholog_cluster=OG0000784;product=term%3DGlycosyltransferase 61%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04577;Ontology_term=GO:0016757 LTnewLM_11 Pfam protein_match 189740 190144 . + . Parent=LTnewLM_110011700.1:pep;Name=PF04577;signature_desc=Glycosyltransferase 61;Ontology_term=GO:0016757 ### LTnewLM_11 AUGUSTUS gene 191986 193638 1 + . ID=LTnewLM_110011800 LTnewLM_11 AUGUSTUS mRNA 191986 193638 1 + . ID=LTnewLM_110011800.1;Parent=LTnewLM_110011800 LTnewLM_11 AUGUSTUS CDS 191986 193638 1 + 0 ID=LTnewLM_110011800.1:CDS:1;Parent=LTnewLM_110011800.1 ### LTnewLM_11 . polypeptide 191986 193638 . + . ID=LTnewLM_110011800.1:pep;Derives_from=LTnewLM_110011800.1;orthologous_to=LmjF.11.0550_mRNA;ortholog_cluster=OG0000785;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_11 Pfam protein_match 192367 192636 . + . Parent=LTnewLM_110011800.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 LTnewLM_11 Pfam protein_match 193120 193605 . + . Parent=LTnewLM_110011800.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_11 AUGUSTUS gene 195959 196183 1 + . ID=LTnewLM_110011900 LTnewLM_11 AUGUSTUS mRNA 195959 196183 1 + . ID=LTnewLM_110011900.1;Parent=LTnewLM_110011900 LTnewLM_11 AUGUSTUS CDS 195959 196183 1 + 0 ID=LTnewLM_110011900.1:CDS:1;Parent=LTnewLM_110011900.1 ### LTnewLM_11 . polypeptide 195959 196183 . + . ID=LTnewLM_110011900.1:pep;Derives_from=LTnewLM_110011900.1;orthologous_to=LTnewLM_140010400.1;ortholog_cluster=OG0000786;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 Liftoff gene 199759 203547 . + . ID=LTnewLM_110012000;coverage=1.0;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0560_0 LTnewLM_11 Liftoff mRNA 199759 203547 . + . ID=LTnewLM_110012000.1;Parent=LTnewLM_110012000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 199759 203547 . + 0 ID=LTnewLM_110012000.1:CDS:1;Parent=LTnewLM_110012000.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 199759 203547 . + . ID=LTnewLM_110012000.1:pep;Derives_from=LTnewLM_110012000.1;orthologous_to=LmjF.11.0560_mRNA;ortholog_cluster=OG0000787;product=term%3DTex-like protein N-terminal domain/Tex protein YqgF-like domain/Helix-hairpin-helix motif/HHH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09371|Pfam:PF16921|Pfam:PF12836|Pfam:PF17674 LTnewLM_11 Pfam protein_match 200638 201174 . + . Parent=LTnewLM_110012000.1:pep;Name=PF09371;signature_desc=Tex-like protein N-terminal domain LTnewLM_11 Pfam protein_match 201673 202032 . + . Parent=LTnewLM_110012000.1:pep;Name=PF16921;signature_desc=Tex protein YqgF-like domain LTnewLM_11 Pfam protein_match 202162 202344 . + . Parent=LTnewLM_110012000.1:pep;Name=PF12836;signature_desc=Helix-hairpin-helix motif LTnewLM_11 Pfam protein_match 202363 202659 . + . Parent=LTnewLM_110012000.1:pep;Name=PF17674;signature_desc=HHH domain ### LTnewLM_11 AUGUSTUS gene 204652 205334 0.59 + . ID=LTnewLM_110012100 LTnewLM_11 AUGUSTUS mRNA 204652 205334 0.59 + . ID=LTnewLM_110012100.1;Parent=LTnewLM_110012100 LTnewLM_11 AUGUSTUS CDS 204652 204773 0.94 + 0 ID=LTnewLM_110012100.1:CDS:1;Parent=LTnewLM_110012100.1 LTnewLM_11 AUGUSTUS CDS 205127 205334 0.61 + 1 ID=LTnewLM_110012100.1:CDS:2;Parent=LTnewLM_110012100.1 ### LTnewLM_11 . polypeptide 204652 205334 . + . ID=LTnewLM_110012100.1:pep;Derives_from=LTnewLM_110012100.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 205375 205752 1 + . ID=LTnewLM_110012200 LTnewLM_11 AUGUSTUS mRNA 205375 205752 1 + . ID=LTnewLM_110012200.1;Parent=LTnewLM_110012200 LTnewLM_11 AUGUSTUS CDS 205375 205752 1 + 0 ID=LTnewLM_110012200.1:CDS:1;Parent=LTnewLM_110012200.1 ### LTnewLM_11 . polypeptide 205375 205752 . + . ID=LTnewLM_110012200.1:pep;Derives_from=LTnewLM_110012200.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 205947 206231 0.99 + . ID=LTnewLM_110012300 LTnewLM_11 AUGUSTUS mRNA 205947 206231 0.99 + . ID=LTnewLM_110012300.1;Parent=LTnewLM_110012300 LTnewLM_11 AUGUSTUS CDS 205947 206231 0.99 + 0 ID=LTnewLM_110012300.1:CDS:1;Parent=LTnewLM_110012300.1 ### LTnewLM_11 . polypeptide 205947 206231 . + . ID=LTnewLM_110012300.1:pep;Derives_from=LTnewLM_110012300.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 208518 208946 1 + . ID=LTnewLM_110012400 LTnewLM_11 AUGUSTUS mRNA 208518 208946 1 + . ID=LTnewLM_110012400.1;Parent=LTnewLM_110012400 LTnewLM_11 AUGUSTUS CDS 208518 208946 1 + 0 ID=LTnewLM_110012400.1:CDS:1;Parent=LTnewLM_110012400.1 ### LTnewLM_11 . polypeptide 208518 208946 . + . ID=LTnewLM_110012400.1:pep;Derives_from=LTnewLM_110012400.1;orthologous_to=LmjF.11.0580_mRNA;ortholog_cluster=OG0000788;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_11 Pfam protein_match 208545 208754 . + . Parent=LTnewLM_110012400.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_11 . pseudogene 214304 216433 . + . ID=LTnewLM_110012500:pseudogene;coverage=0.992;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0590_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 214304 216433 . + . ID=LTnewLM_110012500.1;Parent=LTnewLM_110012500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 214304 216433 . + . ID=LTnewLM_110012500.1:pseudogenic_exon:1;Parent=LTnewLM_110012500.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 214304 216433 . + . ID=LTnewLM_110012500.1:pep;Derives_from=LTnewLM_110012500.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 217402 219198 1 + . ID=LTnewLM_110012600 LTnewLM_11 AUGUSTUS mRNA 217402 219198 1 + . ID=LTnewLM_110012600.1;Parent=LTnewLM_110012600 LTnewLM_11 AUGUSTUS CDS 217402 219198 1 + 0 ID=LTnewLM_110012600.1:CDS:1;Parent=LTnewLM_110012600.1 ### LTnewLM_11 . polypeptide 217402 219198 . + . ID=LTnewLM_110012600.1:pep;Derives_from=LTnewLM_110012600.1;orthologous_to=LmjF.11.0600_mRNA;ortholog_cluster=OG0000789;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . pseudogene 228431 231829 . + . ID=LTnewLM_110012700:pseudogene;coverage=0.998;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0610_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 228431 231829 . + . ID=LTnewLM_110012700.1;Parent=LTnewLM_110012700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 228431 231829 . + . ID=LTnewLM_110012700.1:pseudogenic_exon:1;Parent=LTnewLM_110012700.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 228431 231829 . + . ID=LTnewLM_110012700.1:pep;Derives_from=LTnewLM_110012700.1;orthologous_to=LmjF.11.0610_mRNA;ortholog_cluster=OG0007427;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 236080 236958 1 + . ID=LTnewLM_110012800 LTnewLM_11 AUGUSTUS mRNA 236080 236958 1 + . ID=LTnewLM_110012800.1;Parent=LTnewLM_110012800 LTnewLM_11 AUGUSTUS CDS 236080 236958 1 + 0 ID=LTnewLM_110012800.1:CDS:1;Parent=LTnewLM_110012800.1 ### LTnewLM_11 . polypeptide 236080 236958 . + . ID=LTnewLM_110012800.1:pep;Derives_from=LTnewLM_110012800.1;orthologous_to=LmjF.11.0620_mRNA;ortholog_cluster=OG0000790;product=term%3DCytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_11 Pfam protein_match 236083 236931 . + . Parent=LTnewLM_110012800.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_11 . pseudogene 239362 240972 2.94e+03 + . ID=LTnewLM_110012900:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.11.0630:mRNA 3 539;original_prot_length=539 LTnewLM_11 . pseudogenic_transcript 239362 240972 . + . ID=LTnewLM_110012900.1;Parent=LTnewLM_110012900:pseudogene LTnewLM_11 . pseudogenic_exon 239362 240972 . + . ID=LTnewLM_110012900.1:pseudogenic_exon:1;Parent=LTnewLM_110012900.1 ### LTnewLM_11 . polypeptide 239362 240972 . + . ID=LTnewLM_110012900.1:pep;Derives_from=LTnewLM_110012900.1;orthologous_to=LTnewLM_110013000.1,LTnewLM_110013100.1,LmjF.11.0630_mRNA;ortholog_cluster=OG0000110;product=term%3DM17 aminopeptidase N-terminal domain 2/Cytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18295|Pfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_11 Pfam protein_match 239491 239853 . + . Parent=LTnewLM_110012900.1:pep;Name=PF18295;signature_desc=M17 aminopeptidase N-terminal domain 2 LTnewLM_11 Pfam protein_match 239998 240945 . + . Parent=LTnewLM_110012900.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_11 . pseudogene 243368 244978 2.9e+03 + . ID=LTnewLM_110013000:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.11.0630:mRNA 3 539;original_prot_length=539 LTnewLM_11 . pseudogenic_transcript 243368 244978 . + . ID=LTnewLM_110013000.1;Parent=LTnewLM_110013000:pseudogene LTnewLM_11 . pseudogenic_exon 243368 244978 . + . ID=LTnewLM_110013000.1:pseudogenic_exon:1;Parent=LTnewLM_110013000.1 ### LTnewLM_11 . polypeptide 243368 244978 . + . ID=LTnewLM_110013000.1:pep;Derives_from=LTnewLM_110013000.1;orthologous_to=LTnewLM_110012900.1,LTnewLM_110013100.1,LmjF.11.0630_mRNA;ortholog_cluster=OG0000110;product=term%3DM17 aminopeptidase N-terminal domain 2/Cytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18295|Pfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_11 Pfam protein_match 243497 243859 . + . Parent=LTnewLM_110013000.1:pep;Name=PF18295;signature_desc=M17 aminopeptidase N-terminal domain 2 LTnewLM_11 Pfam protein_match 244004 244951 . + . Parent=LTnewLM_110013000.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_11 Liftoff gene 247373 248989 . + . ID=LTnewLM_110013100;coverage=1.0;sequence_ID=0.977;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0630_0 LTnewLM_11 Liftoff mRNA 247373 248989 . + . ID=LTnewLM_110013100.1;Parent=LTnewLM_110013100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 247373 248989 . + 0 ID=LTnewLM_110013100.1:CDS:1;Parent=LTnewLM_110013100.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 247373 248989 . + . ID=LTnewLM_110013100.1:pep;Derives_from=LTnewLM_110013100.1;orthologous_to=LTnewLM_110012900.1,LTnewLM_110013000.1,LmjF.11.0630_mRNA;ortholog_cluster=OG0000110;product=term%3DM17 aminopeptidase N-terminal domain 2/Cytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18295|Pfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_11 Pfam protein_match 247508 247870 . + . Parent=LTnewLM_110013100.1:pep;Name=PF18295;signature_desc=M17 aminopeptidase N-terminal domain 2 LTnewLM_11 Pfam protein_match 248015 248962 . + . Parent=LTnewLM_110013100.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_11 AUGUSTUS gene 251217 257042 1 + . ID=LTnewLM_110013200 LTnewLM_11 AUGUSTUS mRNA 251217 257042 1 + . ID=LTnewLM_110013200.1;Parent=LTnewLM_110013200 LTnewLM_11 AUGUSTUS CDS 251217 257042 1 + 0 ID=LTnewLM_110013200.1:CDS:1;Parent=LTnewLM_110013200.1 ### LTnewLM_11 . polypeptide 251217 257042 . + . ID=LTnewLM_110013200.1:pep;Derives_from=LTnewLM_110013200.1;orthologous_to=LmjF.11.0640_mRNA;ortholog_cluster=OG0000791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 258893 260818 1 + . ID=LTnewLM_110013300 LTnewLM_11 AUGUSTUS mRNA 258893 260818 1 + . ID=LTnewLM_110013300.1;Parent=LTnewLM_110013300 LTnewLM_11 AUGUSTUS CDS 258893 260818 1 + 0 ID=LTnewLM_110013300.1:CDS:1;Parent=LTnewLM_110013300.1 ### LTnewLM_11 . polypeptide 258893 260818 . + . ID=LTnewLM_110013300.1:pep;Derives_from=LTnewLM_110013300.1;orthologous_to=LmjF.11.0650_mRNA;ortholog_cluster=OG0000792;product=term%3DMajor Facilitator Superfamily/Nodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF06813;Ontology_term=GO:0016021,GO:0055085 LTnewLM_11 Pfam protein_match 258989 259780 . + . Parent=LTnewLM_110013300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_11 Pfam protein_match 259019 259522 . + . Parent=LTnewLM_110013300.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_11 AUGUSTUS gene 264339 266438 1 + . ID=LTnewLM_110013400 LTnewLM_11 AUGUSTUS mRNA 264339 266438 1 + . ID=LTnewLM_110013400.1;Parent=LTnewLM_110013400 LTnewLM_11 AUGUSTUS CDS 264339 266438 1 + 0 ID=LTnewLM_110013400.1:CDS:1;Parent=LTnewLM_110013400.1 ### LTnewLM_11 . polypeptide 264339 266438 . + . ID=LTnewLM_110013400.1:pep;Derives_from=LTnewLM_110013400.1;orthologous_to=LmjF.11.0660_mRNA;ortholog_cluster=OG0000793;product=term%3DNodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813 LTnewLM_11 Pfam protein_match 264462 264965 . + . Parent=LTnewLM_110013400.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_11 AUGUSTUS gene 268389 270257 1 + . ID=LTnewLM_110013500 LTnewLM_11 AUGUSTUS mRNA 268389 270257 1 + . ID=LTnewLM_110013500.1;Parent=LTnewLM_110013500 LTnewLM_11 AUGUSTUS CDS 268389 270257 1 + 0 ID=LTnewLM_110013500.1:CDS:1;Parent=LTnewLM_110013500.1 ### LTnewLM_11 . polypeptide 268389 270257 . + . ID=LTnewLM_110013500.1:pep;Derives_from=LTnewLM_110013500.1;orthologous_to=LTnewLM_110013600.1,LmjF.11.0670_mRNA,LmjF.11.0673_mRNA,LmjF.11.0675_mRNA,LmjF.11.0680_mRNA;ortholog_cluster=OG0000053;product=term%3DNodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813 LTnewLM_11 Pfam protein_match 268524 269054 . + . Parent=LTnewLM_110013500.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_11 AUGUSTUS gene 276726 277538 1 + . ID=LTnewLM_110013600 LTnewLM_11 AUGUSTUS mRNA 276726 277538 1 + . ID=LTnewLM_110013600.1;Parent=LTnewLM_110013600 LTnewLM_11 AUGUSTUS CDS 276726 277538 1 + 0 ID=LTnewLM_110013600.1:CDS:1;Parent=LTnewLM_110013600.1 ### LTnewLM_11 . polypeptide 276726 277538 . + . ID=LTnewLM_110013600.1:pep;Derives_from=LTnewLM_110013600.1;orthologous_to=LTnewLM_110013500.1,LmjF.11.0670_mRNA,LmjF.11.0673_mRNA,LmjF.11.0675_mRNA,LmjF.11.0680_mRNA;ortholog_cluster=OG0000053;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 278723 279403 1 + . ID=LTnewLM_110013700 LTnewLM_11 AUGUSTUS mRNA 278723 279403 1 + . ID=LTnewLM_110013700.1;Parent=LTnewLM_110013700 LTnewLM_11 AUGUSTUS CDS 278723 279403 1 + 0 ID=LTnewLM_110013700.1:CDS:1;Parent=LTnewLM_110013700.1 ### LTnewLM_11 . polypeptide 278723 279403 . + . ID=LTnewLM_110013700.1:pep;Derives_from=LTnewLM_110013700.1;orthologous_to=LmjF.11.0690_mRNA;ortholog_cluster=OG0000794;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13637|Pfam:PF00023|Pfam:PF13606;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 278747 278941 . + . Parent=LTnewLM_110013700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_11 Pfam protein_match 278750 278914 . + . Parent=LTnewLM_110013700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_11 Pfam protein_match 278858 278947 . + . Parent=LTnewLM_110013700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 279083 279310 . + . Parent=LTnewLM_110013700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_11 Pfam protein_match 279107 279190 . + . Parent=LTnewLM_110013700.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 279116 279229 . + . Parent=LTnewLM_110013700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_11 Pfam protein_match 279251 279376 . + . Parent=LTnewLM_110013700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_11 AUGUSTUS gene 281157 282386 1 + . ID=LTnewLM_110013800 LTnewLM_11 AUGUSTUS mRNA 281157 282386 1 + . ID=LTnewLM_110013800.1;Parent=LTnewLM_110013800 LTnewLM_11 AUGUSTUS CDS 281157 282386 1 + 0 ID=LTnewLM_110013800.1:CDS:1;Parent=LTnewLM_110013800.1 ### LTnewLM_11 . polypeptide 281157 282386 . + . ID=LTnewLM_110013800.1:pep;Derives_from=LTnewLM_110013800.1;orthologous_to=LmjF.11.0700_mRNA;ortholog_cluster=OG0000795;product=term%3DAnion-transporting ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02374 LTnewLM_11 Pfam protein_match 281196 281807 . + . Parent=LTnewLM_110013800.1:pep;Name=PF02374;signature_desc=Anion-transporting ATPase LTnewLM_11 Pfam protein_match 281988 282329 . + . Parent=LTnewLM_110013800.1:pep;Name=PF02374;signature_desc=Anion-transporting ATPase ### LTnewLM_11 AUGUSTUS gene 284178 285848 1 + . ID=LTnewLM_110013900 LTnewLM_11 AUGUSTUS mRNA 284178 285848 1 + . ID=LTnewLM_110013900.1;Parent=LTnewLM_110013900 LTnewLM_11 AUGUSTUS CDS 284178 285848 1 + 0 ID=LTnewLM_110013900.1:CDS:1;Parent=LTnewLM_110013900.1 ### LTnewLM_11 . polypeptide 284178 285848 . + . ID=LTnewLM_110013900.1:pep;Derives_from=LTnewLM_110013900.1;orthologous_to=LmjF.11.0710_mRNA;ortholog_cluster=OG0000796;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 288792 290753 1 + . ID=LTnewLM_110014000 LTnewLM_11 AUGUSTUS mRNA 288792 290753 1 + . ID=LTnewLM_110014000.1;Parent=LTnewLM_110014000 LTnewLM_11 AUGUSTUS CDS 288792 290753 1 + 0 ID=LTnewLM_110014000.1:CDS:1;Parent=LTnewLM_110014000.1 ### LTnewLM_11 . polypeptide 288792 290753 . + . ID=LTnewLM_110014000.1:pep;Derives_from=LTnewLM_110014000.1;orthologous_to=LmjF.11.0720_mRNA;ortholog_cluster=OG0000797;product=term%3DClostripain family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03415 LTnewLM_11 Pfam protein_match 289116 289451 . + . Parent=LTnewLM_110014000.1:pep;Name=PF03415;signature_desc=Clostripain family ### LTnewLM_11 . pseudogene 293287 297516 . + . ID=LTnewLM_110014100:pseudogene;coverage=0.993;sequence_ID=0.911;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0730_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 293287 297516 . + . ID=LTnewLM_110014100.1;Parent=LTnewLM_110014100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 293287 297516 . + . ID=LTnewLM_110014100.1:pseudogenic_exon:1;Parent=LTnewLM_110014100.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 293287 297516 . + . ID=LTnewLM_110014100.1:pep;Derives_from=LTnewLM_110014100.1;orthologous_to=LmjF.11.0730_mRNA;ortholog_cluster=OG0007428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 298489 299823 1 + . ID=LTnewLM_110014200 LTnewLM_11 AUGUSTUS mRNA 298489 299823 1 + . ID=LTnewLM_110014200.1;Parent=LTnewLM_110014200 LTnewLM_11 AUGUSTUS CDS 298489 299823 1 + 0 ID=LTnewLM_110014200.1:CDS:1;Parent=LTnewLM_110014200.1 ### LTnewLM_11 . polypeptide 298489 299823 . + . ID=LTnewLM_110014200.1:pep;Derives_from=LTnewLM_110014200.1;orthologous_to=LmjF.11.0740_mRNA;ortholog_cluster=OG0000798;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 301590 302207 1 + . ID=LTnewLM_110014300 LTnewLM_11 AUGUSTUS mRNA 301590 302207 1 + . ID=LTnewLM_110014300.1;Parent=LTnewLM_110014300 LTnewLM_11 AUGUSTUS CDS 301590 302207 1 + 0 ID=LTnewLM_110014300.1:CDS:1;Parent=LTnewLM_110014300.1 ### LTnewLM_11 . polypeptide 301590 302207 . + . ID=LTnewLM_110014300.1:pep;Derives_from=LTnewLM_110014300.1;orthologous_to=LmjF.11.0750_mRNA;ortholog_cluster=OG0000799;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 303797 304291 1 + . ID=LTnewLM_110014400 LTnewLM_11 AUGUSTUS mRNA 303797 304291 1 + . ID=LTnewLM_110014400.1;Parent=LTnewLM_110014400 LTnewLM_11 AUGUSTUS CDS 303797 304291 1 + 0 ID=LTnewLM_110014400.1:CDS:1;Parent=LTnewLM_110014400.1 ### LTnewLM_11 . polypeptide 303797 304291 . + . ID=LTnewLM_110014400.1:pep;Derives_from=LTnewLM_110014400.1;orthologous_to=LTnewLM_110014500.1,LmjF.11.0760_mRNA,LmjF.11.0780_mRNA;ortholog_cluster=OG0000111;product=term%3DRibosomal protein S21e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01249;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_11 Pfam protein_match 303812 304042 . + . Parent=LTnewLM_110014400.1:pep;Name=PF01249;signature_desc=Ribosomal protein S21e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_11 . pseudogene 305521 306012 784 + . ID=LTnewLM_110014500:pseudogene;has_internal_stop=true;has_frameshift=false;has_start=true;Target=LmjF.11.0760:mRNA 1 164;original_prot_length=165 LTnewLM_11 . pseudogenic_transcript 305521 306012 . + . ID=LTnewLM_110014500.1;Parent=LTnewLM_110014500:pseudogene LTnewLM_11 . pseudogenic_exon 305521 306012 . + . ID=LTnewLM_110014500.1:pseudogenic_exon:1;Parent=LTnewLM_110014500.1 ### LTnewLM_11 . polypeptide 305521 306012 . + . ID=LTnewLM_110014500.1:pep;Derives_from=LTnewLM_110014500.1;orthologous_to=LTnewLM_110014400.1,LmjF.11.0760_mRNA,LmjF.11.0780_mRNA;ortholog_cluster=OG0000111;product=term%3DRibosomal protein S21e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01249;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_11 Pfam protein_match 305536 305766 . + . Parent=LTnewLM_110014500.1:pep;Name=PF01249;signature_desc=Ribosomal protein S21e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_11 AUGUSTUS gene 308442 309212 1 + . ID=LTnewLM_110014600 LTnewLM_11 AUGUSTUS mRNA 308442 309212 1 + . ID=LTnewLM_110014600.1;Parent=LTnewLM_110014600 LTnewLM_11 AUGUSTUS CDS 308442 309212 1 + 0 ID=LTnewLM_110014600.1:CDS:1;Parent=LTnewLM_110014600.1 ### LTnewLM_11 . polypeptide 308442 309212 . + . ID=LTnewLM_110014600.1:pep;Derives_from=LTnewLM_110014600.1;orthologous_to=LmjF.11.0790_mRNA;ortholog_cluster=OG0000800;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 310675 311118 1 + . ID=LTnewLM_110014700 LTnewLM_11 AUGUSTUS mRNA 310675 311118 1 + . ID=LTnewLM_110014700.1;Parent=LTnewLM_110014700 LTnewLM_11 AUGUSTUS CDS 310675 311118 1 + 0 ID=LTnewLM_110014700.1:CDS:1;Parent=LTnewLM_110014700.1 ### LTnewLM_11 . polypeptide 310675 311118 . + . ID=LTnewLM_110014700.1:pep;Derives_from=LTnewLM_110014700.1;orthologous_to=LmjF.11.0800_mRNA;ortholog_cluster=OG0000801;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 311817 314744 1 + . ID=LTnewLM_110014800 LTnewLM_11 AUGUSTUS mRNA 311817 314744 1 + . ID=LTnewLM_110014800.1;Parent=LTnewLM_110014800 LTnewLM_11 AUGUSTUS CDS 311817 314744 1 + 0 ID=LTnewLM_110014800.1:CDS:1;Parent=LTnewLM_110014800.1 ### LTnewLM_11 . polypeptide 311817 314744 . + . ID=LTnewLM_110014800.1:pep;Derives_from=LTnewLM_110014800.1;orthologous_to=LmjF.11.0810_mRNA;ortholog_cluster=OG0000802;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 316994 318418 1 + . ID=LTnewLM_110014900 LTnewLM_11 AUGUSTUS mRNA 316994 318418 1 + . ID=LTnewLM_110014900.1;Parent=LTnewLM_110014900 LTnewLM_11 AUGUSTUS CDS 316994 318418 1 + 0 ID=LTnewLM_110014900.1:CDS:1;Parent=LTnewLM_110014900.1 ### LTnewLM_11 . polypeptide 316994 318418 . + . ID=LTnewLM_110014900.1:pep;Derives_from=LTnewLM_110014900.1;orthologous_to=LmjF.11.0820_mRNA;ortholog_cluster=OG0000803;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 324595 328809 1 + . ID=LTnewLM_110015000 LTnewLM_11 AUGUSTUS mRNA 324595 328809 1 + . ID=LTnewLM_110015000.1;Parent=LTnewLM_110015000 LTnewLM_11 AUGUSTUS CDS 324595 328809 1 + 0 ID=LTnewLM_110015000.1:CDS:1;Parent=LTnewLM_110015000.1 ### LTnewLM_11 . polypeptide 324595 328809 . + . ID=LTnewLM_110015000.1:pep;Derives_from=LTnewLM_110015000.1;orthologous_to=LmjF.11.0830_mRNA;ortholog_cluster=OG0000804;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . pseudogene 331613 332718 1.63e+03 + . ID=LTnewLM_110015100:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.11.0840:mRNA 1 376;original_prot_length=378 LTnewLM_11 . pseudogenic_transcript 331613 332718 . + . ID=LTnewLM_110015100.1;Parent=LTnewLM_110015100:pseudogene LTnewLM_11 . pseudogenic_exon 331613 331684 . + . ID=LTnewLM_110015100.1:pseudogenic_exon:1;Parent=LTnewLM_110015100.1 LTnewLM_11 . pseudogenic_exon 331687 332346 . + . ID=LTnewLM_110015100.1:pseudogenic_exon:2;Parent=LTnewLM_110015100.1 LTnewLM_11 . pseudogenic_exon 332349 332486 . + . ID=LTnewLM_110015100.1:pseudogenic_exon:3;Parent=LTnewLM_110015100.1 LTnewLM_11 . pseudogenic_exon 332488 332718 . + . ID=LTnewLM_110015100.1:pseudogenic_exon:4;Parent=LTnewLM_110015100.1 ### LTnewLM_11 . polypeptide 331613 332718 . + . ID=LTnewLM_110015100.1:pep;Derives_from=LTnewLM_110015100.1;orthologous_to=LmjF.11.0840_mRNA;ortholog_cluster=OG0007429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 Liftoff gene 335247 336689 . + . ID=LTnewLM_110015200;coverage=0.995;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0850_0 LTnewLM_11 Liftoff mRNA 335247 336689 . + . ID=LTnewLM_110015200.1;Parent=LTnewLM_110015200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 335247 336689 . + 0 ID=LTnewLM_110015200.1:CDS:1;Parent=LTnewLM_110015200.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 335247 336689 . + . ID=LTnewLM_110015200.1:pep;Derives_from=LTnewLM_110015200.1;orthologous_to=LmjF.11.0850_mRNA;ortholog_cluster=OG0000805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . pseudogene 338078 343563 . + . ID=LTnewLM_110015300:pseudogene;coverage=0.997;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0860_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 338078 343563 . + . ID=LTnewLM_110015300.1;Parent=LTnewLM_110015300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 338078 343563 . + . ID=LTnewLM_110015300.1:pseudogenic_exon:1;Parent=LTnewLM_110015300.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 338078 343563 . + . ID=LTnewLM_110015300.1:pep;Derives_from=LTnewLM_110015300.1;orthologous_to=LmjF.11.0860_mRNA;ortholog_cluster=OG0007430;product=term%3DSister chromatid cohesion protein PDS5 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20168 LTnewLM_11 Pfam protein_match 339374 341593 . + . Parent=LTnewLM_110015300.1:pep;Name=PF20168;signature_desc=Sister chromatid cohesion protein PDS5 protein ### LTnewLM_11 Liftoff gene 345290 349741 . + . ID=LTnewLM_110015400;coverage=0.999;sequence_ID=0.947;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.11.0870_0 LTnewLM_11 Liftoff mRNA 345290 349741 . + . ID=LTnewLM_110015400.1;Parent=LTnewLM_110015400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 345290 349741 . + 0 ID=LTnewLM_110015400.1:CDS:1;Parent=LTnewLM_110015400.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 345290 349741 . + . ID=LTnewLM_110015400.1:pep;Derives_from=LTnewLM_110015400.1;orthologous_to=LmjF.11.0870_mRNA;ortholog_cluster=OG0000806;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_11 Pfam protein_match 345371 345853 . + . Parent=LTnewLM_110015400.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_11 Pfam protein_match 345380 346681 . + . Parent=LTnewLM_110015400.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_11 Liftoff gene 356116 357105 . + . ID=LTnewLM_110015500;coverage=1.0;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0880_0 LTnewLM_11 Liftoff mRNA 356116 357105 . + . ID=LTnewLM_110015500.1;Parent=LTnewLM_110015500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 356116 357105 . + 0 ID=LTnewLM_110015500.1:CDS:1;Parent=LTnewLM_110015500.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 356116 357105 . + . ID=LTnewLM_110015500.1:pep;Derives_from=LTnewLM_110015500.1;orthologous_to=LmjF.11.0880_mRNA;ortholog_cluster=OG0000807;product=term%3DSTART domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01852;Ontology_term=GO:0008289 LTnewLM_11 Pfam protein_match 356458 356934 . + . Parent=LTnewLM_110015500.1:pep;Name=PF01852;signature_desc=START domain;Ontology_term=GO:0008289 ### LTnewLM_11 AUGUSTUS gene 358517 359728 1 + . ID=LTnewLM_110015600 LTnewLM_11 AUGUSTUS mRNA 358517 359728 1 + . ID=LTnewLM_110015600.1;Parent=LTnewLM_110015600 LTnewLM_11 AUGUSTUS CDS 358517 359728 1 + 0 ID=LTnewLM_110015600.1:CDS:1;Parent=LTnewLM_110015600.1 ### LTnewLM_11 . polypeptide 358517 359728 . + . ID=LTnewLM_110015600.1:pep;Derives_from=LTnewLM_110015600.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 361356 364388 1 + . ID=LTnewLM_110015700 LTnewLM_11 AUGUSTUS mRNA 361356 364388 1 + . ID=LTnewLM_110015700.1;Parent=LTnewLM_110015700 LTnewLM_11 AUGUSTUS CDS 361356 364388 1 + 0 ID=LTnewLM_110015700.1:CDS:1;Parent=LTnewLM_110015700.1 ### LTnewLM_11 . polypeptide 361356 364388 . + . ID=LTnewLM_110015700.1:pep;Derives_from=LTnewLM_110015700.1;orthologous_to=LmjF.11.0890_mRNA;ortholog_cluster=OG0000808;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_11 Pfam protein_match 362325 362369 . + . Parent=LTnewLM_110015700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_11 Pfam protein_match 362949 363008 . + . Parent=LTnewLM_110015700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_11 Pfam protein_match 363024 363092 . + . Parent=LTnewLM_110015700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_11 Pfam protein_match 363783 363821 . + . Parent=LTnewLM_110015700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_11 AUGUSTUS gene 365730 366302 1 + . ID=LTnewLM_110015800 LTnewLM_11 AUGUSTUS mRNA 365730 366302 1 + . ID=LTnewLM_110015800.1;Parent=LTnewLM_110015800 LTnewLM_11 AUGUSTUS CDS 365730 366302 1 + 0 ID=LTnewLM_110015800.1:CDS:1;Parent=LTnewLM_110015800.1 ### LTnewLM_11 . polypeptide 365730 366302 . + . ID=LTnewLM_110015800.1:pep;Derives_from=LTnewLM_110015800.1;orthologous_to=LmjF.11.0900_mRNA;ortholog_cluster=OG0000809;product=term%3DRibosomal protein L24e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01246 LTnewLM_11 Pfam protein_match 365730 365921 . + . Parent=LTnewLM_110015800.1:pep;Name=PF01246;signature_desc=Ribosomal protein L24e ### LTnewLM_11 AUGUSTUS gene 368099 372742 1 + . ID=LTnewLM_110015900 LTnewLM_11 AUGUSTUS mRNA 368099 372742 1 + . ID=LTnewLM_110015900.1;Parent=LTnewLM_110015900 LTnewLM_11 AUGUSTUS CDS 368099 372742 1 + 0 ID=LTnewLM_110015900.1:CDS:1;Parent=LTnewLM_110015900.1 ### LTnewLM_11 . polypeptide 368099 372742 . + . ID=LTnewLM_110015900.1:pep;Derives_from=LTnewLM_110015900.1;orthologous_to=LmjF.11.0910_mRNA;ortholog_cluster=OG0000810;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862;Ontology_term=GO:0005524 LTnewLM_11 Pfam protein_match 369491 369934 . + . Parent=LTnewLM_110015900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_11 Pfam protein_match 370028 370114 . + . Parent=LTnewLM_110015900.1:pep;Name=PF17862;signature_desc=AAA+ lid domain ### LTnewLM_11 AUGUSTUS gene 373391 375244 1 + . ID=LTnewLM_110016000 LTnewLM_11 AUGUSTUS mRNA 373391 375244 1 + . ID=LTnewLM_110016000.1;Parent=LTnewLM_110016000 LTnewLM_11 AUGUSTUS CDS 373391 375244 1 + 0 ID=LTnewLM_110016000.1:CDS:1;Parent=LTnewLM_110016000.1 ### LTnewLM_11 . polypeptide 373391 375244 . + . ID=LTnewLM_110016000.1:pep;Derives_from=LTnewLM_110016000.1;orthologous_to=LmjF.11.0920_mRNA;ortholog_cluster=OG0000811;product=term%3DPUB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09409 LTnewLM_11 Pfam protein_match 373910 374101 . + . Parent=LTnewLM_110016000.1:pep;Name=PF09409;signature_desc=PUB domain ### LTnewLM_11 Aragorn_1.2.36 gene 376688 376762 . - . ID=LTnewLM_110016100 LTnewLM_11 Aragorn_1.2.36 tRNA 376688 376762 . - . ID=LTnewLM_110016100:tRNA;Parent=LTnewLM_110016100;aa=Met;anticodon=cat;gc_content=61.3 ### LTnewLM_11 Aragorn_1.2.36 gene 376836 376909 . + . ID=LTnewLM_110016200 LTnewLM_11 Aragorn_1.2.36 tRNA 376836 376909 . + . ID=LTnewLM_110016200:tRNA;Parent=LTnewLM_110016200;aa=Arg;anticodon=acg;gc_content=52.7 ### LTnewLM_11 Liftoff gene 376969 377089 . + . ID=LTnewLM_110016300;coverage=0.991;sequence_ID=0.975;extra_copy_number=0;copy_num_ID=LmjF.15.5SrRNA.01_0 LTnewLM_11 Liftoff rRNA 376969 377089 . + . ID=LTnewLM_110016300:rRNA;Parent=LTnewLM_110016300;extra_copy_number=0 ### LTnewLM_11 GenomeTools gene 376971 377089 90.7 + . ID=LTnewLM_110016400 LTnewLM_11 INFERNAL rRNA 376971 377089 90.7 + . ID=LTnewLM_110016400:rRNA;Parent=LTnewLM_110016400;gc=0.52;evalue=6.9e-20;score=90.7;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_11 AUGUSTUS gene 378057 379403 1 + . ID=LTnewLM_110016500 LTnewLM_11 AUGUSTUS mRNA 378057 379403 1 + . ID=LTnewLM_110016500.1;Parent=LTnewLM_110016500 LTnewLM_11 AUGUSTUS CDS 378057 379403 1 + 0 ID=LTnewLM_110016500.1:CDS:1;Parent=LTnewLM_110016500.1 ### LTnewLM_11 . polypeptide 378057 379403 . + . ID=LTnewLM_110016500.1:pep;Derives_from=LTnewLM_110016500.1;orthologous_to=LmjF.11.0930_mRNA;ortholog_cluster=OG0000812;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . pseudogene 380548 384972 . + . ID=LTnewLM_110016600:pseudogene;coverage=0.996;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.0940_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 380548 384972 . + . ID=LTnewLM_110016600.1;Parent=LTnewLM_110016600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 380548 384972 . + . ID=LTnewLM_110016600.1:pseudogenic_exon:1;Parent=LTnewLM_110016600.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 380548 384972 . + . ID=LTnewLM_110016600.1:pep;Derives_from=LTnewLM_110016600.1;orthologous_to=LmjF.11.0940_mRNA;ortholog_cluster=OG0007431;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . polypeptide 387491 387969 . + . ID=LTnewLM_110016700.1:pep;Derives_from=LTnewLM_110016700.1;orthologous_to=LTnewLM_110016700.2,LmjF.11.0950_mRNA;ortholog_cluster=OG0000315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 387491 389032 1.62 + . ID=LTnewLM_110016700 LTnewLM_11 AUGUSTUS mRNA 387491 387969 0.62 + . ID=LTnewLM_110016700.1;Parent=LTnewLM_110016700 LTnewLM_11 AUGUSTUS CDS 387491 387820 0.62 + 0 ID=LTnewLM_110016700.1:CDS:1;Parent=LTnewLM_110016700.1 LTnewLM_11 AUGUSTUS CDS 387967 387969 0.65 + 0 ID=LTnewLM_110016700.1:CDS:2;Parent=LTnewLM_110016700.1 LTnewLM_11 AUGUSTUS mRNA 387491 389032 1 + . ID=LTnewLM_110016700.2;Parent=LTnewLM_110016700 LTnewLM_11 AUGUSTUS CDS 387491 389032 1 + 0 ID=LTnewLM_110016700.2:CDS:1;Parent=LTnewLM_110016700.2 ### LTnewLM_11 . polypeptide 387491 389032 . + . ID=LTnewLM_110016700.2:pep;Derives_from=LTnewLM_110016700.2;orthologous_to=LTnewLM_110016700.1,LmjF.11.0950_mRNA;ortholog_cluster=OG0000315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 390621 391193 1 + . ID=LTnewLM_110016800 LTnewLM_11 AUGUSTUS mRNA 390621 391193 1 + . ID=LTnewLM_110016800.1;Parent=LTnewLM_110016800 LTnewLM_11 AUGUSTUS CDS 390621 391193 1 + 0 ID=LTnewLM_110016800.1:CDS:1;Parent=LTnewLM_110016800.1 ### LTnewLM_11 . polypeptide 390621 391193 . + . ID=LTnewLM_110016800.1:pep;Derives_from=LTnewLM_110016800.1;orthologous_to=LTnewLM_110016900.1,LmjF.11.0960_mRNA,LmjF.11.0970_mRNA;ortholog_cluster=OG0000112;product=term%3DRibosomal protein S7p/S5e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00177 LTnewLM_11 Pfam protein_match 390765 391187 . + . Parent=LTnewLM_110016800.1:pep;Name=PF00177;signature_desc=Ribosomal protein S7p/S5e ### LTnewLM_11 AUGUSTUS gene 392569 393141 1 + . ID=LTnewLM_110016900 LTnewLM_11 AUGUSTUS mRNA 392569 393141 1 + . ID=LTnewLM_110016900.1;Parent=LTnewLM_110016900 LTnewLM_11 AUGUSTUS CDS 392569 393141 1 + 0 ID=LTnewLM_110016900.1:CDS:1;Parent=LTnewLM_110016900.1 ### LTnewLM_11 . polypeptide 392569 393141 . + . ID=LTnewLM_110016900.1:pep;Derives_from=LTnewLM_110016900.1;orthologous_to=LTnewLM_110016800.1,LmjF.11.0960_mRNA,LmjF.11.0970_mRNA;ortholog_cluster=OG0000112;product=term%3DRibosomal protein S7p/S5e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00177 LTnewLM_11 Pfam protein_match 392713 393135 . + . Parent=LTnewLM_110016900.1:pep;Name=PF00177;signature_desc=Ribosomal protein S7p/S5e ### LTnewLM_11 AUGUSTUS gene 394445 395899 1 + . ID=LTnewLM_110017000 LTnewLM_11 AUGUSTUS mRNA 394445 395899 1 + . ID=LTnewLM_110017000.1;Parent=LTnewLM_110017000 LTnewLM_11 AUGUSTUS CDS 394445 395899 1 + 0 ID=LTnewLM_110017000.1:CDS:1;Parent=LTnewLM_110017000.1 ### LTnewLM_11 . polypeptide 394445 395899 . + . ID=LTnewLM_110017000.1:pep;Derives_from=LTnewLM_110017000.1;orthologous_to=LmjF.11.0980_mRNA;ortholog_cluster=OG0000813;product=term%3DHIT zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04438 LTnewLM_11 Pfam protein_match 395771 395854 . + . Parent=LTnewLM_110017000.1:pep;Name=PF04438;signature_desc=HIT zinc finger ### LTnewLM_11 AUGUSTUS gene 397678 400653 1 + . ID=LTnewLM_110017100 LTnewLM_11 AUGUSTUS mRNA 397678 400653 1 + . ID=LTnewLM_110017100.1;Parent=LTnewLM_110017100 LTnewLM_11 AUGUSTUS CDS 397678 400653 1 + 0 ID=LTnewLM_110017100.1:CDS:1;Parent=LTnewLM_110017100.1 ### LTnewLM_11 . polypeptide 397678 400653 . + . ID=LTnewLM_110017100.1:pep;Derives_from=LTnewLM_110017100.1;orthologous_to=LmjF.11.0990_mRNA;ortholog_cluster=OG0000814;product=term%3DAdaptin N terminal region/non-SMC mitotic condensation complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF12717;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_11 Pfam protein_match 397741 399528 . + . Parent=LTnewLM_110017100.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_11 Pfam protein_match 397987 398364 . + . Parent=LTnewLM_110017100.1:pep;Name=PF12717;signature_desc=non-SMC mitotic condensation complex subunit 1 ### LTnewLM_11 AUGUSTUS gene 403300 406045 0.83 + . ID=LTnewLM_110017200 LTnewLM_11 AUGUSTUS mRNA 403300 406045 0.83 + . ID=LTnewLM_110017200.1;Parent=LTnewLM_110017200 LTnewLM_11 AUGUSTUS CDS 403300 404499 0.83 + 0 ID=LTnewLM_110017200.1:CDS:1;Parent=LTnewLM_110017200.1 LTnewLM_11 AUGUSTUS CDS 404546 406045 0.89 + 0 ID=LTnewLM_110017200.1:CDS:2;Parent=LTnewLM_110017200.1 ### LTnewLM_11 . polypeptide 403300 406045 . + . ID=LTnewLM_110017200.1:pep;Derives_from=LTnewLM_110017200.1;orthologous_to=LmjF.11.1000_mRNA;ortholog_cluster=OG0000815;product=term%3DPyruvate phosphate dikinase%2C AMP/ATP-binding domain/PEP-utilising enzyme%2C mobile domain/PEP-utilising enzyme%2C PEP-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01326|Pfam:PF00391|Pfam:PF02896;Ontology_term=GO:0016772,GO:0016310,GO:0016301,GO:0005524 LTnewLM_11 Pfam protein_match 403369 403491 . + . Parent=LTnewLM_110017200.1:pep;Name=PF01326;signature_desc=Pyruvate phosphate dikinase%2C AMP/ATP-binding domain;Ontology_term=GO:0005524,GO:0016301,GO:0016310 LTnewLM_11 Pfam protein_match 403501 404451 . + . Parent=LTnewLM_110017200.1:pep;Name=PF01326;signature_desc=Pyruvate phosphate dikinase%2C AMP/ATP-binding domain;Ontology_term=GO:0005524,GO:0016301,GO:0016310 LTnewLM_11 Pfam protein_match 404602 404838 . + . Parent=LTnewLM_110017200.1:pep;Name=PF00391;signature_desc=PEP-utilising enzyme%2C mobile domain;Ontology_term=GO:0016772,GO:0016310 LTnewLM_11 Pfam protein_match 404884 405933 . + . Parent=LTnewLM_110017200.1:pep;Name=PF02896;signature_desc=PEP-utilising enzyme%2C PEP-binding domain;Ontology_term=GO:0016772,GO:0016310 ### LTnewLM_11 AUGUSTUS gene 408105 410171 1 + . ID=LTnewLM_110017300 LTnewLM_11 AUGUSTUS mRNA 408105 410171 1 + . ID=LTnewLM_110017300.1;Parent=LTnewLM_110017300 LTnewLM_11 AUGUSTUS CDS 408105 410171 1 + 0 ID=LTnewLM_110017300.1:CDS:1;Parent=LTnewLM_110017300.1 ### LTnewLM_11 . polypeptide 408105 410171 . + . ID=LTnewLM_110017300.1:pep;Derives_from=LTnewLM_110017300.1;orthologous_to=LmjF.11.1010_mRNA;ortholog_cluster=OG0000816;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 414095 419601 0.43 + . ID=LTnewLM_110017400 LTnewLM_11 AUGUSTUS mRNA 414095 419601 0.43 + . ID=LTnewLM_110017400.1;Parent=LTnewLM_110017400 LTnewLM_11 AUGUSTUS CDS 414095 419109 0.57 + 0 ID=LTnewLM_110017400.1:CDS:1;Parent=LTnewLM_110017400.1 LTnewLM_11 AUGUSTUS CDS 419196 419601 0.43 + 1 ID=LTnewLM_110017400.1:CDS:2;Parent=LTnewLM_110017400.1 ### LTnewLM_11 . polypeptide 414095 419601 . + . ID=LTnewLM_110017400.1:pep;Derives_from=LTnewLM_110017400.1;orthologous_to=LmjF.11.1020_mRNA;ortholog_cluster=OG0000817;product=term%3DStarter unit:ACP transacylase in aflatoxin biosynthesis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16073 LTnewLM_11 Pfam protein_match 416699 417352 . + . Parent=LTnewLM_110017400.1:pep;Name=PF16073;signature_desc=Starter unit:ACP transacylase in aflatoxin biosynthesis ### LTnewLM_11 AUGUSTUS gene 420363 421169 1 + . ID=LTnewLM_110017500 LTnewLM_11 AUGUSTUS mRNA 420363 421169 1 + . ID=LTnewLM_110017500.1;Parent=LTnewLM_110017500 LTnewLM_11 AUGUSTUS CDS 420363 421169 1 + 0 ID=LTnewLM_110017500.1:CDS:1;Parent=LTnewLM_110017500.1 ### LTnewLM_11 . polypeptide 420363 421169 . + . ID=LTnewLM_110017500.1:pep;Derives_from=LTnewLM_110017500.1;orthologous_to=LmjF.11.1030_mRNA;ortholog_cluster=OG0000818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 430848 433631 1 + . ID=LTnewLM_110017600 LTnewLM_11 AUGUSTUS mRNA 430848 433631 1 + . ID=LTnewLM_110017600.1;Parent=LTnewLM_110017600 LTnewLM_11 AUGUSTUS CDS 430848 433631 1 + 0 ID=LTnewLM_110017600.1:CDS:1;Parent=LTnewLM_110017600.1 ### LTnewLM_11 . polypeptide 430848 433631 . + . ID=LTnewLM_110017600.1:pep;Derives_from=LTnewLM_110017600.1;orthologous_to=LmjF.11.1040_mRNA;ortholog_cluster=OG0000819;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 437684 439144 1 + . ID=LTnewLM_110017700 LTnewLM_11 AUGUSTUS mRNA 437684 439144 1 + . ID=LTnewLM_110017700.1;Parent=LTnewLM_110017700 LTnewLM_11 AUGUSTUS CDS 437684 439144 1 + 0 ID=LTnewLM_110017700.1:CDS:1;Parent=LTnewLM_110017700.1 ### LTnewLM_11 . polypeptide 437684 439144 . + . ID=LTnewLM_110017700.1:pep;Derives_from=LTnewLM_110017700.1;orthologous_to=LmjF.11.1050_mRNA;ortholog_cluster=OG0000820;product=term%3DPlug domain of Sec61p/SecY%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10559|Pfam:PF00344;Ontology_term=GO:0015031,GO:0016020 LTnewLM_11 Pfam protein_match 437807 437908 . + . Parent=LTnewLM_110017700.1:pep;Name=PF10559;signature_desc=Plug domain of Sec61p LTnewLM_11 Pfam protein_match 437912 439078 . + . Parent=LTnewLM_110017700.1:pep;Name=PF00344;signature_desc=SecY;Ontology_term=GO:0015031,GO:0016020 ### LTnewLM_11 AUGUSTUS gene 442576 443274 1 + . ID=LTnewLM_110017800 LTnewLM_11 AUGUSTUS mRNA 442576 443274 1 + . ID=LTnewLM_110017800.1;Parent=LTnewLM_110017800 LTnewLM_11 AUGUSTUS CDS 442576 443274 1 + 0 ID=LTnewLM_110017800.1:CDS:1;Parent=LTnewLM_110017800.1 ### LTnewLM_11 . polypeptide 442576 443274 . + . ID=LTnewLM_110017800.1:pep;Derives_from=LTnewLM_110017800.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 443296 444581 0.82 + . ID=LTnewLM_110017900 LTnewLM_11 AUGUSTUS mRNA 443296 444581 0.82 + . ID=LTnewLM_110017900.1;Parent=LTnewLM_110017900 LTnewLM_11 AUGUSTUS CDS 443296 444434 0.82 + 0 ID=LTnewLM_110017900.1:CDS:1;Parent=LTnewLM_110017900.1 LTnewLM_11 AUGUSTUS CDS 444494 444581 0.91 + 1 ID=LTnewLM_110017900.1:CDS:2;Parent=LTnewLM_110017900.1 ### LTnewLM_11 . polypeptide 443296 444581 . + . ID=LTnewLM_110017900.1:pep;Derives_from=LTnewLM_110017900.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 444695 445389 0.42 + . ID=LTnewLM_110018000 LTnewLM_11 AUGUSTUS mRNA 444695 445389 0.42 + . ID=LTnewLM_110018000.1;Parent=LTnewLM_110018000 LTnewLM_11 AUGUSTUS CDS 444695 445090 0.56 + 0 ID=LTnewLM_110018000.1:CDS:1;Parent=LTnewLM_110018000.1 LTnewLM_11 AUGUSTUS CDS 445144 445389 0.42 + 0 ID=LTnewLM_110018000.1:CDS:2;Parent=LTnewLM_110018000.1 ### LTnewLM_11 . polypeptide 444695 445389 . + . ID=LTnewLM_110018000.1:pep;Derives_from=LTnewLM_110018000.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 445549 446270 0.88 + . ID=LTnewLM_110018100 LTnewLM_11 AUGUSTUS mRNA 445549 446270 0.88 + . ID=LTnewLM_110018100.1;Parent=LTnewLM_110018100 LTnewLM_11 AUGUSTUS CDS 445549 446146 0.88 + 0 ID=LTnewLM_110018100.1:CDS:1;Parent=LTnewLM_110018100.1 LTnewLM_11 AUGUSTUS CDS 446215 446270 0.88 + 2 ID=LTnewLM_110018100.1:CDS:2;Parent=LTnewLM_110018100.1 ### LTnewLM_11 . polypeptide 445549 446270 . + . ID=LTnewLM_110018100.1:pep;Derives_from=LTnewLM_110018100.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 446353 447069 2 + . ID=LTnewLM_110018200 LTnewLM_11 AUGUSTUS mRNA 446353 447069 1 + . ID=LTnewLM_110018200.1;Parent=LTnewLM_110018200 LTnewLM_11 AUGUSTUS CDS 446353 447069 1 + 0 ID=LTnewLM_110018200.1:CDS:1;Parent=LTnewLM_110018200.1 LTnewLM_11 AUGUSTUS mRNA 446749 447069 1 + . ID=LTnewLM_110018200.2;Parent=LTnewLM_110018200 LTnewLM_11 AUGUSTUS CDS 446749 447069 1 + 0 ID=LTnewLM_110018200.2:CDS:1;Parent=LTnewLM_110018200.2 ### LTnewLM_11 . polypeptide 446353 447069 . + . ID=LTnewLM_110018200.1:pep;Derives_from=LTnewLM_110018200.1;orthologous_to=LTnewLM_110018200.2,LmjF.11.1070_mRNA;ortholog_cluster=OG0000316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 . polypeptide 446749 447069 . + . ID=LTnewLM_110018200.2:pep;Derives_from=LTnewLM_110018200.2;orthologous_to=LTnewLM_110018200.1,LmjF.11.1070_mRNA;ortholog_cluster=OG0000316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 Liftoff gene 449055 450935 . + . ID=LTnewLM_110018300;coverage=0.998;sequence_ID=0.924;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.11.1080_0 LTnewLM_11 Liftoff mRNA 449055 450935 . + . ID=LTnewLM_110018300.1;Parent=LTnewLM_110018300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 449055 450935 . + 0 ID=LTnewLM_110018300.1:CDS:1;Parent=LTnewLM_110018300.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 449055 450935 . + . ID=LTnewLM_110018300.1:pep;Derives_from=LTnewLM_110018300.1;orthologous_to=LmjF.11.1080_mRNA;ortholog_cluster=OG0000821;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_11 Pfam protein_match 450471 450845 . + . Parent=LTnewLM_110018300.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_11 AUGUSTUS gene 453199 454596 1 + . ID=LTnewLM_110018400 LTnewLM_11 AUGUSTUS mRNA 453199 454596 1 + . ID=LTnewLM_110018400.1;Parent=LTnewLM_110018400 LTnewLM_11 AUGUSTUS CDS 453199 454596 1 + 0 ID=LTnewLM_110018400.1:CDS:1;Parent=LTnewLM_110018400.1 ### LTnewLM_11 . polypeptide 453199 454596 . + . ID=LTnewLM_110018400.1:pep;Derives_from=LTnewLM_110018400.1;orthologous_to=LmjF.11.1090_mRNA;ortholog_cluster=OG0000822;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_11 Pfam protein_match 454141 454518 . + . Parent=LTnewLM_110018400.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_11 AUGUSTUS gene 456978 458420 1 + . ID=LTnewLM_110018500 LTnewLM_11 AUGUSTUS mRNA 456978 458420 1 + . ID=LTnewLM_110018500.1;Parent=LTnewLM_110018500 LTnewLM_11 AUGUSTUS CDS 456978 458420 1 + 0 ID=LTnewLM_110018500.1:CDS:1;Parent=LTnewLM_110018500.1 ### LTnewLM_11 . polypeptide 456978 458420 . + . ID=LTnewLM_110018500.1:pep;Derives_from=LTnewLM_110018500.1;orthologous_to=LmjF.11.1100_mRNA;ortholog_cluster=OG0000823;product=term%3DCytochrome P450%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00067;Ontology_term=GO:0055114,GO:0005506,GO:0016705,GO:0020037 LTnewLM_11 Pfam protein_match 457089 458348 . + . Parent=LTnewLM_110018500.1:pep;Name=PF00067;signature_desc=Cytochrome P450;Ontology_term=GO:0005506,GO:0016705,GO:0020037,GO:0055114 ### LTnewLM_11 AUGUSTUS gene 461240 461683 1 + . ID=LTnewLM_110018600 LTnewLM_11 AUGUSTUS mRNA 461240 461683 1 + . ID=LTnewLM_110018600.1;Parent=LTnewLM_110018600 LTnewLM_11 AUGUSTUS CDS 461240 461683 1 + 0 ID=LTnewLM_110018600.1:CDS:1;Parent=LTnewLM_110018600.1 ### LTnewLM_11 . polypeptide 461240 461683 . + . ID=LTnewLM_110018600.1:pep;Derives_from=LTnewLM_110018600.1;orthologous_to=LTnewLM_110018800.1,LmjF.11.1110_mRNA,LmjF.11.1130_mRNA;ortholog_cluster=OG0000113;product=term%3DRibosomal L28e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01778 LTnewLM_11 Pfam protein_match 461258 461581 . + . Parent=LTnewLM_110018600.1:pep;Name=PF01778;signature_desc=Ribosomal L28e protein family ### LTnewLM_11 AUGUSTUS gene 462936 463949 1 + . ID=LTnewLM_110018700 LTnewLM_11 AUGUSTUS mRNA 462936 463949 1 + . ID=LTnewLM_110018700.1;Parent=LTnewLM_110018700 LTnewLM_11 AUGUSTUS CDS 462936 463949 1 + 0 ID=LTnewLM_110018700.1:CDS:1;Parent=LTnewLM_110018700.1 ### LTnewLM_11 . polypeptide 462936 463949 . + . ID=LTnewLM_110018700.1:pep;Derives_from=LTnewLM_110018700.1;orthologous_to=LmjF.11.1120_mRNA;ortholog_cluster=OG0000824;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 464982 465425 1 + . ID=LTnewLM_110018800 LTnewLM_11 AUGUSTUS mRNA 464982 465425 1 + . ID=LTnewLM_110018800.1;Parent=LTnewLM_110018800 LTnewLM_11 AUGUSTUS CDS 464982 465425 1 + 0 ID=LTnewLM_110018800.1:CDS:1;Parent=LTnewLM_110018800.1 ### LTnewLM_11 . polypeptide 464982 465425 . + . ID=LTnewLM_110018800.1:pep;Derives_from=LTnewLM_110018800.1;orthologous_to=LTnewLM_110018600.1,LmjF.11.1110_mRNA,LmjF.11.1130_mRNA;ortholog_cluster=OG0000113;product=term%3DRibosomal L28e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01778 LTnewLM_11 Pfam protein_match 465000 465323 . + . Parent=LTnewLM_110018800.1:pep;Name=PF01778;signature_desc=Ribosomal L28e protein family ### LTnewLM_11 AUGUSTUS gene 466919 470392 1 + . ID=LTnewLM_110018900 LTnewLM_11 AUGUSTUS mRNA 466919 470392 1 + . ID=LTnewLM_110018900.1;Parent=LTnewLM_110018900 LTnewLM_11 AUGUSTUS CDS 466919 470392 1 + 0 ID=LTnewLM_110018900.1:CDS:1;Parent=LTnewLM_110018900.1 ### LTnewLM_11 . polypeptide 466919 470392 . + . ID=LTnewLM_110018900.1:pep;Derives_from=LTnewLM_110018900.1;orthologous_to=LmjF.11.1160_mRNA;ortholog_cluster=OG0000825;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 467288 467392 . + . Parent=LTnewLM_110018900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 467723 467833 . + . Parent=LTnewLM_110018900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_11 AUGUSTUS gene 472827 475097 1 + . ID=LTnewLM_110019000 LTnewLM_11 AUGUSTUS mRNA 472827 475097 1 + . ID=LTnewLM_110019000.1;Parent=LTnewLM_110019000 LTnewLM_11 AUGUSTUS CDS 472827 475097 1 + 0 ID=LTnewLM_110019000.1:CDS:1;Parent=LTnewLM_110019000.1 ### LTnewLM_11 . polypeptide 472827 475097 . + . ID=LTnewLM_110019000.1:pep;Derives_from=LTnewLM_110019000.1;orthologous_to=LmjF.11.1170_mRNA;ortholog_cluster=OG0000826;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_11 Pfam protein_match 473778 474428 . + . Parent=LTnewLM_110019000.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_11 Pfam protein_match 474735 475049 . + . Parent=LTnewLM_110019000.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 ### LTnewLM_11 AUGUSTUS gene 476973 478298 1 + . ID=LTnewLM_110019100 LTnewLM_11 AUGUSTUS mRNA 476973 478298 1 + . ID=LTnewLM_110019100.1;Parent=LTnewLM_110019100 LTnewLM_11 AUGUSTUS CDS 476973 478298 1 + 0 ID=LTnewLM_110019100.1:CDS:1;Parent=LTnewLM_110019100.1 ### LTnewLM_11 . polypeptide 476973 478298 . + . ID=LTnewLM_110019100.1:pep;Derives_from=LTnewLM_110019100.1;orthologous_to=LmjF.11.1180_mRNA;ortholog_cluster=OG0000827;product=term%3D60Kd inner membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02096;Ontology_term=GO:0016021,GO:0051205 LTnewLM_11 Pfam protein_match 477453 478034 . + . Parent=LTnewLM_110019100.1:pep;Name=PF02096;signature_desc=60Kd inner membrane protein;Ontology_term=GO:0051205,GO:0016021 ### LTnewLM_11 AUGUSTUS gene 480763 481155 1 + . ID=LTnewLM_110019200 LTnewLM_11 AUGUSTUS mRNA 480763 481155 1 + . ID=LTnewLM_110019200.1;Parent=LTnewLM_110019200 LTnewLM_11 AUGUSTUS CDS 480763 481155 1 + 0 ID=LTnewLM_110019200.1:CDS:1;Parent=LTnewLM_110019200.1 ### LTnewLM_11 . polypeptide 480763 481155 . + . ID=LTnewLM_110019200.1:pep;Derives_from=LTnewLM_110019200.1;orthologous_to=LTnewLM_290025700.1,LmjF.11.1190_mRNA,LmjF.29.1800_mRNA;ortholog_cluster=OG0000114;product=term%3DRibosomal protein S8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00410;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_11 Pfam protein_match 480781 481149 . + . Parent=LTnewLM_110019200.1:pep;Name=PF00410;signature_desc=Ribosomal protein S8;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_11 AUGUSTUS gene 482804 484882 1 + . ID=LTnewLM_110019300 LTnewLM_11 AUGUSTUS mRNA 482804 484882 1 + . ID=LTnewLM_110019300.1;Parent=LTnewLM_110019300 LTnewLM_11 AUGUSTUS CDS 482804 484882 1 + 0 ID=LTnewLM_110019300.1:CDS:1;Parent=LTnewLM_110019300.1 ### LTnewLM_11 . polypeptide 482804 484882 . + . ID=LTnewLM_110019300.1:pep;Derives_from=LTnewLM_110019300.1;orthologous_to=LmjF.11.1200_mRNA;ortholog_cluster=OG0000828;product=term%3DOrganic solute transporter Ostalpha%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03619 LTnewLM_11 Pfam protein_match 482930 483718 . + . Parent=LTnewLM_110019300.1:pep;Name=PF03619;signature_desc=Organic solute transporter Ostalpha ### LTnewLM_11 AUGUSTUS gene 486219 486770 1 + . ID=LTnewLM_110019400 LTnewLM_11 AUGUSTUS mRNA 486219 486770 1 + . ID=LTnewLM_110019400.1;Parent=LTnewLM_110019400 LTnewLM_11 AUGUSTUS CDS 486219 486770 1 + 0 ID=LTnewLM_110019400.1:CDS:1;Parent=LTnewLM_110019400.1 ### LTnewLM_11 . polypeptide 486219 486770 . + . ID=LTnewLM_110019400.1:pep;Derives_from=LTnewLM_110019400.1;orthologous_to=LmjF.11.1210_mRNA;ortholog_cluster=OG0000829;product=term%3DSkp1 family%2C tetramerisation domain/Skp1 family%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03931|Pfam:PF01466;Ontology_term=GO:0006511 LTnewLM_11 Pfam protein_match 486270 486443 . + . Parent=LTnewLM_110019400.1:pep;Name=PF03931;signature_desc=Skp1 family%2C tetramerisation domain;Ontology_term=GO:0006511 LTnewLM_11 Pfam protein_match 486618 486755 . + . Parent=LTnewLM_110019400.1:pep;Name=PF01466;signature_desc=Skp1 family%2C dimerisation domain;Ontology_term=GO:0006511 ### LTnewLM_11 AUGUSTUS gene 492781 493120 0.85 + . ID=LTnewLM_110019500 LTnewLM_11 AUGUSTUS mRNA 492781 493120 0.85 + . ID=LTnewLM_110019500.1;Parent=LTnewLM_110019500 LTnewLM_11 AUGUSTUS CDS 492781 492961 0.85 + 0 ID=LTnewLM_110019500.1:CDS:1;Parent=LTnewLM_110019500.1 LTnewLM_11 AUGUSTUS CDS 493050 493120 0.99 + 2 ID=LTnewLM_110019500.1:CDS:2;Parent=LTnewLM_110019500.1 ### LTnewLM_11 . polypeptide 492781 493120 . + . ID=LTnewLM_110019500.1:pep;Derives_from=LTnewLM_110019500.1;orthologous_to=LTnewLM_110019600.1,LTnewLM_110019900.1,LmjF.11.1220_mRNA,LmjF.11.1240_mRNA,LmjF.11.1250_mRNA;ortholog_cluster=OG0000054;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 493150 498476 0.69 + . ID=LTnewLM_110019600 LTnewLM_11 AUGUSTUS mRNA 493150 498476 0.69 + . ID=LTnewLM_110019600.1;Parent=LTnewLM_110019600 LTnewLM_11 AUGUSTUS CDS 493150 494097 0.92 + 0 ID=LTnewLM_110019600.1:CDS:1;Parent=LTnewLM_110019600.1 LTnewLM_11 AUGUSTUS CDS 494148 498476 0.69 + 0 ID=LTnewLM_110019600.1:CDS:2;Parent=LTnewLM_110019600.1 ### LTnewLM_11 . polypeptide 493150 498476 . + . ID=LTnewLM_110019600.1:pep;Derives_from=LTnewLM_110019600.1;orthologous_to=LTnewLM_110019500.1,LTnewLM_110019900.1,LmjF.11.1220_mRNA,LmjF.11.1240_mRNA,LmjF.11.1250_mRNA;ortholog_cluster=OG0000054;product=term%3DABC-2 family transporter protein/ABC transporter/AAA domain%2C putative AbiEii toxin%2C Type IV TA system%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005|Pfam:PF13304;Ontology_term=GO:0016887,GO:0005524 LTnewLM_11 Pfam protein_match 494140 494745 . + . Parent=LTnewLM_110019600.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 494983 495411 . + . Parent=LTnewLM_110019600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 496135 497268 . + . Parent=LTnewLM_110019600.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 497470 497898 . + . Parent=LTnewLM_110019600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 497776 497991 . + . Parent=LTnewLM_110019600.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 ### LTnewLM_11 AUGUSTUS gene 501362 501820 1 + . ID=LTnewLM_110019700 LTnewLM_11 AUGUSTUS mRNA 501362 501820 1 + . ID=LTnewLM_110019700.1;Parent=LTnewLM_110019700 LTnewLM_11 AUGUSTUS CDS 501362 501820 1 + 0 ID=LTnewLM_110019700.1:CDS:1;Parent=LTnewLM_110019700.1 ### LTnewLM_11 . polypeptide 501362 501820 . + . ID=LTnewLM_110019700.1:pep;Derives_from=LTnewLM_110019700.1;product=term%3Dhypothetical protein ### LTnewLM_11 . pseudogene 503354 509078 . + . ID=LTnewLM_110019800:pseudogene;coverage=0.999;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.1240_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 503354 509078 . + . ID=LTnewLM_110019800.1;Parent=LTnewLM_110019800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 503354 509078 . + . ID=LTnewLM_110019800.1:pseudogenic_exon:1;Parent=LTnewLM_110019800.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 503354 509078 . + . ID=LTnewLM_110019800.1:pep;Derives_from=LTnewLM_110019800.1;product=term%3DABC-2 family transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698 LTnewLM_11 Pfam protein_match 504611 505594 . + . Parent=LTnewLM_110019800.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_11 AUGUSTUS gene 514362 520053 0.55 + . ID=LTnewLM_110019900 LTnewLM_11 AUGUSTUS mRNA 514362 520053 0.55 + . ID=LTnewLM_110019900.1;Parent=LTnewLM_110019900 LTnewLM_11 AUGUSTUS CDS 514362 519359 0.86 + 0 ID=LTnewLM_110019900.1:CDS:1;Parent=LTnewLM_110019900.1 LTnewLM_11 AUGUSTUS CDS 519424 520053 0.56 + 0 ID=LTnewLM_110019900.1:CDS:2;Parent=LTnewLM_110019900.1 ### LTnewLM_11 . polypeptide 514362 520053 . + . ID=LTnewLM_110019900.1:pep;Derives_from=LTnewLM_110019900.1;orthologous_to=LTnewLM_110019500.1,LTnewLM_110019600.1,LmjF.11.1220_mRNA,LmjF.11.1240_mRNA,LmjF.11.1250_mRNA;ortholog_cluster=OG0000054;product=term%3DABC-2 family transporter protein/ABC transporter/AAA domain%2C putative AbiEii toxin%2C Type IV TA system%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005|Pfam:PF13304;Ontology_term=GO:0016887,GO:0005524 LTnewLM_11 Pfam protein_match 515652 516371 . + . Parent=LTnewLM_110019900.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 516609 517037 . + . Parent=LTnewLM_110019900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 517761 518894 . + . Parent=LTnewLM_110019900.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 519096 519461 . + . Parent=LTnewLM_110019900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 519369 519554 . + . Parent=LTnewLM_110019900.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 ### LTnewLM_11 . pseudogene 524867 530248 . + . ID=LTnewLM_110020000:pseudogene;coverage=0.998;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.1270_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 524867 530248 . + . ID=LTnewLM_110020000.1;Parent=LTnewLM_110020000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 524867 530248 . + . ID=LTnewLM_110020000.1:pseudogenic_exon:1;Parent=LTnewLM_110020000.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 524867 530248 . + . ID=LTnewLM_110020000.1:pep;Derives_from=LTnewLM_110020000.1;orthologous_to=LmjF.11.1270_mRNA;ortholog_cluster=OG0007432;product=term%3DABC-2 family transporter protein/ABC transporter/AAA domain%2C putative AbiEii toxin%2C Type IV TA system%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005|Pfam:PF13304;Ontology_term=GO:0016887,GO:0005524 LTnewLM_11 Pfam protein_match 525023 526609 . + . Parent=LTnewLM_110020000.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 526841 527269 . + . Parent=LTnewLM_110020000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 527894 529009 . + . Parent=LTnewLM_110020000.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 529217 529645 . + . Parent=LTnewLM_110020000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 529511 529738 . + . Parent=LTnewLM_110020000.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 ### LTnewLM_11 . pseudogene 536047 537132 . + . ID=LTnewLM_110020100:pseudogene;coverage=0.994;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.1280_0;has_internal_stop=true LTnewLM_11 . pseudogenic_transcript 536047 537132 . + . ID=LTnewLM_110020100.1;Parent=LTnewLM_110020100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_11 . pseudogenic_exon 536047 537132 . + . ID=LTnewLM_110020100.1:pseudogenic_exon:1;Parent=LTnewLM_110020100.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 536047 537132 . + . ID=LTnewLM_110020100.1:pep;Derives_from=LTnewLM_110020100.1;product=term%3Dhypothetical protein ### LTnewLM_11 Liftoff gene 538959 544877 . + . ID=LTnewLM_110020200;coverage=0.998;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.11.1290_0 LTnewLM_11 Liftoff mRNA 538959 544877 . + . ID=LTnewLM_110020200.1;Parent=LTnewLM_110020200;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 538959 544877 . + 0 ID=LTnewLM_110020200.1:CDS:1;Parent=LTnewLM_110020200.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 538959 544877 . + . ID=LTnewLM_110020200.1:pep;Derives_from=LTnewLM_110020200.1;orthologous_to=LmjF.11.1290_mRNA;ortholog_cluster=OG0000830;product=term%3DABC-2 family transporter protein/ABC transporter/AAA domain%2C putative AbiEii toxin%2C Type IV TA system%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005|Pfam:PF13304;Ontology_term=GO:0016887,GO:0005524 LTnewLM_11 Pfam protein_match 539706 540767 . + . Parent=LTnewLM_110020200.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 541002 541430 . + . Parent=LTnewLM_110020200.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 542055 543179 . + . Parent=LTnewLM_110020200.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_11 Pfam protein_match 543387 543815 . + . Parent=LTnewLM_110020200.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_11 Pfam protein_match 543726 543908 . + . Parent=LTnewLM_110020200.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 ### LTnewLM_11 AUGUSTUS gene 547459 548019 1 + . ID=LTnewLM_110020300 LTnewLM_11 AUGUSTUS mRNA 547459 548019 1 + . ID=LTnewLM_110020300.1;Parent=LTnewLM_110020300 LTnewLM_11 AUGUSTUS CDS 547459 548019 1 + 0 ID=LTnewLM_110020300.1:CDS:1;Parent=LTnewLM_110020300.1 ### LTnewLM_11 . polypeptide 547459 548019 . + . ID=LTnewLM_110020300.1:pep;Derives_from=LTnewLM_110020300.1;orthologous_to=LmjF.11.1300_mRNA;ortholog_cluster=OG0000831;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 548948 550156 1 + . ID=LTnewLM_110020400 LTnewLM_11 AUGUSTUS mRNA 548948 550156 1 + . ID=LTnewLM_110020400.1;Parent=LTnewLM_110020400 LTnewLM_11 AUGUSTUS CDS 548948 550156 1 + 0 ID=LTnewLM_110020400.1:CDS:1;Parent=LTnewLM_110020400.1 ### LTnewLM_11 . polypeptide 548948 550156 . + . ID=LTnewLM_110020400.1:pep;Derives_from=LTnewLM_110020400.1;orthologous_to=LmjF.11.1310_mRNA;ortholog_cluster=OG0000832;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 550991 552325 1 + . ID=LTnewLM_110020500 LTnewLM_11 AUGUSTUS mRNA 550991 552325 1 + . ID=LTnewLM_110020500.1;Parent=LTnewLM_110020500 LTnewLM_11 AUGUSTUS CDS 550991 552325 1 + 0 ID=LTnewLM_110020500.1:CDS:1;Parent=LTnewLM_110020500.1 ### LTnewLM_11 . polypeptide 550991 552325 . + . ID=LTnewLM_110020500.1:pep;Derives_from=LTnewLM_110020500.1;orthologous_to=LmjF.11.1320_mRNA;ortholog_cluster=OG0000833;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 553682 559009 1 + . ID=LTnewLM_110020600 LTnewLM_11 AUGUSTUS mRNA 553682 559009 1 + . ID=LTnewLM_110020600.1;Parent=LTnewLM_110020600 LTnewLM_11 AUGUSTUS CDS 553682 559009 1 + 0 ID=LTnewLM_110020600.1:CDS:1;Parent=LTnewLM_110020600.1 ### LTnewLM_11 . polypeptide 553682 559009 . + . ID=LTnewLM_110020600.1:pep;Derives_from=LTnewLM_110020600.1;orthologous_to=LmjF.11.1330_mRNA;ortholog_cluster=OG0000834;product=term%3DFlagellar-associated PapD-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14874 LTnewLM_11 Pfam protein_match 558536 558838 . + . Parent=LTnewLM_110020600.1:pep;Name=PF14874;signature_desc=Flagellar-associated PapD-like ### LTnewLM_11 AUGUSTUS gene 559955 561838 1 + . ID=LTnewLM_110020700 LTnewLM_11 AUGUSTUS mRNA 559955 561838 1 + . ID=LTnewLM_110020700.1;Parent=LTnewLM_110020700 LTnewLM_11 AUGUSTUS CDS 559955 561838 1 + 0 ID=LTnewLM_110020700.1:CDS:1;Parent=LTnewLM_110020700.1 ### LTnewLM_11 . polypeptide 559955 561838 . + . ID=LTnewLM_110020700.1:pep;Derives_from=LTnewLM_110020700.1;orthologous_to=LmjF.11.1340_mRNA;ortholog_cluster=OG0000835;product=term%3DNodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813 LTnewLM_11 Pfam protein_match 560033 560770 . + . Parent=LTnewLM_110020700.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_11 Liftoff gene 563856 564575 . + . ID=LTnewLM_110020800;coverage=1.0;sequence_ID=0.956;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.11.1350_0 LTnewLM_11 Liftoff mRNA 563856 564575 . + . ID=LTnewLM_110020800.1;Parent=LTnewLM_110020800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_11 Liftoff CDS 563856 564575 . + 0 ID=LTnewLM_110020800.1:CDS:1;Parent=LTnewLM_110020800.1;extra_copy_number=0 ### LTnewLM_11 . polypeptide 563856 564575 . + . ID=LTnewLM_110020800.1:pep;Derives_from=LTnewLM_110020800.1;orthologous_to=LmjF.11.1350_mRNA;ortholog_cluster=OG0000836;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 565786 567162 1 + . ID=LTnewLM_110020900 LTnewLM_11 AUGUSTUS mRNA 565786 567162 1 + . ID=LTnewLM_110020900.1;Parent=LTnewLM_110020900 LTnewLM_11 AUGUSTUS CDS 565786 567162 1 + 0 ID=LTnewLM_110020900.1:CDS:1;Parent=LTnewLM_110020900.1 ### LTnewLM_11 . polypeptide 565786 567162 . + . ID=LTnewLM_110020900.1:pep;Derives_from=LTnewLM_110020900.1;orthologous_to=LmjF.11.1360_mRNA;ortholog_cluster=OG0000837;product=term%3DRibosomal protein L4/L1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00573;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_11 Pfam protein_match 566290 566862 . + . Parent=LTnewLM_110020900.1:pep;Name=PF00573;signature_desc=Ribosomal protein L4/L1 family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_11 AUGUSTUS gene 569281 571137 1 + . ID=LTnewLM_110021000 LTnewLM_11 AUGUSTUS mRNA 569281 571137 1 + . ID=LTnewLM_110021000.1;Parent=LTnewLM_110021000 LTnewLM_11 AUGUSTUS CDS 569281 571137 1 + 0 ID=LTnewLM_110021000.1:CDS:1;Parent=LTnewLM_110021000.1 ### LTnewLM_11 . polypeptide 569281 571137 . + . ID=LTnewLM_110021000.1:pep;Derives_from=LTnewLM_110021000.1;orthologous_to=LmjF.11.1370_mRNA;ortholog_cluster=OG0000838;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_11 AUGUSTUS gene 571741 571962 1 + . ID=LTnewLM_110021100 LTnewLM_11 AUGUSTUS mRNA 571741 571962 1 + . ID=LTnewLM_110021100.1;Parent=LTnewLM_110021100 LTnewLM_11 AUGUSTUS CDS 571741 571962 1 + 0 ID=LTnewLM_110021100.1:CDS:1;Parent=LTnewLM_110021100.1 ### LTnewLM_11 . polypeptide 571741 571962 . + . ID=LTnewLM_110021100.1:pep;Derives_from=LTnewLM_110021100.1;product=term%3Dhypothetical protein ### LTnewLM_11 AUGUSTUS gene 572372 573532 1 + . ID=LTnewLM_110021200 LTnewLM_11 AUGUSTUS mRNA 572372 573532 1 + . ID=LTnewLM_110021200.1;Parent=LTnewLM_110021200 LTnewLM_11 AUGUSTUS CDS 572372 573532 1 + 0 ID=LTnewLM_110021200.1:CDS:1;Parent=LTnewLM_110021200.1 ### LTnewLM_11 . polypeptide 572372 573532 . + . ID=LTnewLM_110021200.1:pep;Derives_from=LTnewLM_110021200.1;orthologous_to=LmjF.11.1380_mRNA;ortholog_cluster=OG0000839;product=term%3DSH3 domain/Variant SH3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00018|Pfam:PF07653|Pfam:PF14604;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 572402 572536 . + . Parent=LTnewLM_110021200.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 LTnewLM_11 Pfam protein_match 572402 572542 . + . Parent=LTnewLM_110021200.1:pep;Name=PF07653;signature_desc=Variant SH3 domain LTnewLM_11 Pfam protein_match 572402 572545 . + . Parent=LTnewLM_110021200.1:pep;Name=PF14604;signature_desc=Variant SH3 domain;Ontology_term=GO:0005515 ### LTnewLM_11 AUGUSTUS gene 574317 574688 1 - . ID=LTnewLM_110021300 LTnewLM_11 AUGUSTUS mRNA 574317 574688 1 - . ID=LTnewLM_110021300.1;Parent=LTnewLM_110021300 LTnewLM_11 AUGUSTUS CDS 574317 574688 1 - 0 ID=LTnewLM_110021300.1:CDS:1;Parent=LTnewLM_110021300.1 ### LTnewLM_11 . polypeptide 574317 574688 . - . ID=LTnewLM_110021300.1:pep;Derives_from=LTnewLM_110021300.1;product=term%3Dhypothetical protein ### LTnewLM_12 . contig 1 528377 . + . Name=LTnewLM_CTG000011 LTnewLM_12 . pseudogene 1726 3176 1.01e+03 - . ID=LTnewLM_120005000:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.34.2510:mRNA 1 452;original_prot_length=452 LTnewLM_12 . pseudogenic_transcript 1726 3176 . - . ID=LTnewLM_120005000.1;Parent=LTnewLM_120005000:pseudogene LTnewLM_12 . pseudogenic_exon 1726 1734 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:1;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1737 1754 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:2;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1756 1788 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:3;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1790 1819 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:4;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1822 1860 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:5;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1866 1943 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:6;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1945 1971 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:7;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 1973 2008 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:8;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2011 2040 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:9;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2043 2075 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:10;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2077 2154 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:11;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2157 2225 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:12;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2227 2247 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:13;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2249 2320 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:14;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2322 2435 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:15;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2437 2478 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:16;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2480 2485 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:17;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2487 2663 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:18;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2665 2691 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:19;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2693 2779 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:20;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2781 2804 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:21;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2807 2851 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:22;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2853 2882 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:23;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2884 2949 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:24;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2951 2956 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:25;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 2958 3065 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:26;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 3067 3084 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:27;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 3086 3094 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:28;Parent=LTnewLM_120005000.1 LTnewLM_12 . pseudogenic_exon 3096 3176 . - . ID=LTnewLM_120005000.1:pseudogenic_exon:29;Parent=LTnewLM_120005000.1 ### LTnewLM_12 . polypeptide 1726 3176 . - . ID=LTnewLM_120005000.1:pep;Derives_from=LTnewLM_120005000.1;orthologous_to=LTnewLM_340030800.1,LmjF.34.2510_mRNA;ortholog_cluster=OG0000458;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_12 Pfam protein_match 1872 2594 . - . Parent=LTnewLM_120005000.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_12 Liftoff gene 10003 11238 . + . ID=LTnewLM_120005100;coverage=0.766;sequence_ID=0.709;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.12.0010_0 LTnewLM_12 Liftoff mRNA 10003 11238 . + . ID=LTnewLM_120005100.1;Parent=LTnewLM_120005100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_12 Liftoff five_prime_UTR 10003 10230 . + . ID=LTnewLM_120005100:five_prime_UTR;Parent=LTnewLM_120005100.1;extra_copy_number=0 LTnewLM_12 Liftoff CDS 10231 11238 . + 0 ID=LTnewLM_120005100.1:CDS:1;Parent=LTnewLM_120005100.1;extra_copy_number=0 LTnewLM_12 Liftoff mRNA 10305 11238 . + . ID=LTnewLM_120005100.2;Parent=LTnewLM_120005100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_12 Liftoff five_prime_UTR 10305 10332 . + . ID=LTnewLM_120005100:five_prime_UTR.1;Parent=LTnewLM_120005100.2;extra_copy_number=0 LTnewLM_12 Liftoff CDS 10333 11238 . + 0 ID=LTnewLM_120005100.2:CDS:1;Parent=LTnewLM_120005100.2;extra_copy_number=0 ### LTnewLM_12 . polypeptide 10231 11238 . + . ID=LTnewLM_120005100.1:pep;Derives_from=LTnewLM_120005100.1;orthologous_to=LTnewLM_120005100.2,LmjF.12.0010.1_mRNA;ortholog_cluster=OG0000317;product=term%3DInitiation factor 2 subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01008;Ontology_term=GO:0044237 LTnewLM_12 Pfam protein_match 10858 11169 . + . Parent=LTnewLM_120005100.1:pep;Name=PF01008;signature_desc=Initiation factor 2 subunit family;Ontology_term=GO:0044237 ### LTnewLM_12 . polypeptide 10333 11238 . + . ID=LTnewLM_120005100.2:pep;Derives_from=LTnewLM_120005100.2;orthologous_to=LTnewLM_120005100.1,LmjF.12.0010.1_mRNA;ortholog_cluster=OG0000317;product=term%3DInitiation factor 2 subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01008;Ontology_term=GO:0044237 LTnewLM_12 Pfam protein_match 10858 11169 . + . Parent=LTnewLM_120005100.2:pep;Name=PF01008;signature_desc=Initiation factor 2 subunit family;Ontology_term=GO:0044237 ### LTnewLM_12 AUGUSTUS gene 11657 12304 1 + . ID=LTnewLM_120005200 LTnewLM_12 AUGUSTUS mRNA 11657 12304 1 + . ID=LTnewLM_120005200.1;Parent=LTnewLM_120005200 LTnewLM_12 AUGUSTUS CDS 11657 12304 1 + 0 ID=LTnewLM_120005200.1:CDS:1;Parent=LTnewLM_120005200.1 ### LTnewLM_12 . polypeptide 11657 12304 . + . ID=LTnewLM_120005200.1:pep;Derives_from=LTnewLM_120005200.1;orthologous_to=LmjF.12.0020_mRNA;ortholog_cluster=OG0000840;product=term%3DPITH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06201 LTnewLM_12 Pfam protein_match 11750 12184 . + . Parent=LTnewLM_120005200.1:pep;Name=PF06201;signature_desc=PITH domain ### LTnewLM_12 AUGUSTUS gene 12705 13556 1 + . ID=LTnewLM_120005300 LTnewLM_12 AUGUSTUS mRNA 12705 13556 1 + . ID=LTnewLM_120005300.1;Parent=LTnewLM_120005300 LTnewLM_12 AUGUSTUS CDS 12705 13556 1 + 0 ID=LTnewLM_120005300.1:CDS:1;Parent=LTnewLM_120005300.1 ### LTnewLM_12 . polypeptide 12705 13556 . + . ID=LTnewLM_120005300.1:pep;Derives_from=LTnewLM_120005300.1;orthologous_to=LmjF.12.0030_mRNA;ortholog_cluster=OG0000841;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_12 Pfam protein_match 12855 13388 . + . Parent=LTnewLM_120005300.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_12 AUGUSTUS gene 14093 15589 1 + . ID=LTnewLM_120005400 LTnewLM_12 AUGUSTUS mRNA 14093 15589 1 + . ID=LTnewLM_120005400.1;Parent=LTnewLM_120005400 LTnewLM_12 AUGUSTUS CDS 14093 15589 1 + 0 ID=LTnewLM_120005400.1:CDS:1;Parent=LTnewLM_120005400.1 ### LTnewLM_12 . polypeptide 14093 15589 . + . ID=LTnewLM_120005400.1:pep;Derives_from=LTnewLM_120005400.1;orthologous_to=LmjF.12.0040_mRNA;ortholog_cluster=OG0000842;product=term%3DMitochondrial ribosomal death-associated protein 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10236 LTnewLM_12 Pfam protein_match 14525 14989 . + . Parent=LTnewLM_120005400.1:pep;Name=PF10236;signature_desc=Mitochondrial ribosomal death-associated protein 3 ### LTnewLM_12 AUGUSTUS gene 16185 16508 1 + . ID=LTnewLM_120005500 LTnewLM_12 AUGUSTUS mRNA 16185 16508 1 + . ID=LTnewLM_120005500.1;Parent=LTnewLM_120005500 LTnewLM_12 AUGUSTUS CDS 16185 16508 1 + 0 ID=LTnewLM_120005500.1:CDS:1;Parent=LTnewLM_120005500.1 ### LTnewLM_12 . polypeptide 16185 16508 . + . ID=LTnewLM_120005500.1:pep;Derives_from=LTnewLM_120005500.1;orthologous_to=LmjF.12.0045_mRNA;ortholog_cluster=OG0000843;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 16862 18133 1 + . ID=LTnewLM_120005600 LTnewLM_12 AUGUSTUS mRNA 16862 18133 1 + . ID=LTnewLM_120005600.1;Parent=LTnewLM_120005600 LTnewLM_12 AUGUSTUS CDS 16862 18133 1 + 0 ID=LTnewLM_120005600.1:CDS:1;Parent=LTnewLM_120005600.1 ### LTnewLM_12 . polypeptide 16862 18133 . + . ID=LTnewLM_120005600.1:pep;Derives_from=LTnewLM_120005600.1;orthologous_to=LmjF.12.0050_mRNA;ortholog_cluster=OG0000844;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 18936 19514 1 + . ID=LTnewLM_120005700 LTnewLM_12 AUGUSTUS mRNA 18936 19514 1 + . ID=LTnewLM_120005700.1;Parent=LTnewLM_120005700 LTnewLM_12 AUGUSTUS CDS 18936 19514 1 + 0 ID=LTnewLM_120005700.1:CDS:1;Parent=LTnewLM_120005700.1 ### LTnewLM_12 . polypeptide 18936 19514 . + . ID=LTnewLM_120005700.1:pep;Derives_from=LTnewLM_120005700.1;orthologous_to=LmjF.12.0060_mRNA;ortholog_cluster=OG0000845;product=term%3DIsochorismatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00857;Ontology_term=GO:0003824,GO:0008152 LTnewLM_12 Pfam protein_match 18972 19412 . + . Parent=LTnewLM_120005700.1:pep;Name=PF00857;signature_desc=Isochorismatase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_12 AUGUSTUS gene 20402 22132 1 + . ID=LTnewLM_120005800 LTnewLM_12 AUGUSTUS mRNA 20402 22132 1 + . ID=LTnewLM_120005800.1;Parent=LTnewLM_120005800 LTnewLM_12 AUGUSTUS CDS 20402 22132 1 + 0 ID=LTnewLM_120005800.1:CDS:1;Parent=LTnewLM_120005800.1 ### LTnewLM_12 . polypeptide 20402 22132 . + . ID=LTnewLM_120005800.1:pep;Derives_from=LTnewLM_120005800.1;orthologous_to=LmjF.12.0070_mRNA;ortholog_cluster=OG0000846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 Liftoff gene 22879 23151 . + . ID=LTnewLM_120005900;coverage=1.0;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.12.0075_0 LTnewLM_12 Liftoff mRNA 22879 23151 . + . ID=LTnewLM_120005900.1;Parent=LTnewLM_120005900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_12 Liftoff CDS 22879 23151 . + 0 ID=LTnewLM_120005900.1:CDS:1;Parent=LTnewLM_120005900.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 22879 23151 . + . ID=LTnewLM_120005900.1:pep;Derives_from=LTnewLM_120005900.1;orthologous_to=LmjF.12.0075_mRNA;ortholog_cluster=OG0000847;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 23645 24262 1 + . ID=LTnewLM_120006000 LTnewLM_12 AUGUSTUS mRNA 23645 24262 1 + . ID=LTnewLM_120006000.1;Parent=LTnewLM_120006000 LTnewLM_12 AUGUSTUS CDS 23645 24262 1 + 0 ID=LTnewLM_120006000.1:CDS:1;Parent=LTnewLM_120006000.1 ### LTnewLM_12 . polypeptide 23645 24262 . + . ID=LTnewLM_120006000.1:pep;Derives_from=LTnewLM_120006000.1;orthologous_to=LmjF.12.0080_mRNA;ortholog_cluster=OG0000848;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 24822 26267 1 + . ID=LTnewLM_120006100 LTnewLM_12 AUGUSTUS mRNA 24822 26267 1 + . ID=LTnewLM_120006100.1;Parent=LTnewLM_120006100 LTnewLM_12 AUGUSTUS CDS 24822 26267 1 + 0 ID=LTnewLM_120006100.1:CDS:1;Parent=LTnewLM_120006100.1 ### LTnewLM_12 . polypeptide 24822 26267 . + . ID=LTnewLM_120006100.1:pep;Derives_from=LTnewLM_120006100.1;orthologous_to=LmjF.12.0090_mRNA;ortholog_cluster=OG0000849;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 31478 32350 1 + . ID=LTnewLM_120006200 LTnewLM_12 AUGUSTUS mRNA 31478 32350 1 + . ID=LTnewLM_120006200.1;Parent=LTnewLM_120006200 LTnewLM_12 AUGUSTUS CDS 31478 32350 1 + 0 ID=LTnewLM_120006200.1:CDS:1;Parent=LTnewLM_120006200.1 ### LTnewLM_12 . polypeptide 31478 32350 . + . ID=LTnewLM_120006200.1:pep;Derives_from=LTnewLM_120006200.1;orthologous_to=LmjF.12.0100_mRNA;ortholog_cluster=OG0000850;product=term%3DPlus-3 domain/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03126|Pfam:PF13920;Ontology_term=GO:0005634,GO:0016570,GO:0006352,GO:0003677 LTnewLM_12 Pfam protein_match 31526 31867 . + . Parent=LTnewLM_120006200.1:pep;Name=PF03126;signature_desc=Plus-3 domain;Ontology_term=GO:0003677,GO:0006352,GO:0016570,GO:0005634 LTnewLM_12 Pfam protein_match 32186 32323 . + . Parent=LTnewLM_120006200.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_12 AUGUSTUS gene 34119 36821 1 + . ID=LTnewLM_120006300 LTnewLM_12 AUGUSTUS mRNA 34119 36821 1 + . ID=LTnewLM_120006300.1;Parent=LTnewLM_120006300 LTnewLM_12 AUGUSTUS CDS 34119 36821 1 + 0 ID=LTnewLM_120006300.1:CDS:1;Parent=LTnewLM_120006300.1 ### LTnewLM_12 . polypeptide 34119 36821 . + . ID=LTnewLM_120006300.1:pep;Derives_from=LTnewLM_120006300.1;orthologous_to=LmjF.12.0110_mRNA;ortholog_cluster=OG0000851;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_12 Pfam protein_match 34161 34349 . + . Parent=LTnewLM_120006300.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_12 AUGUSTUS gene 37950 42065 1 + . ID=LTnewLM_120006400 LTnewLM_12 AUGUSTUS mRNA 37950 42065 1 + . ID=LTnewLM_120006400.1;Parent=LTnewLM_120006400 LTnewLM_12 AUGUSTUS CDS 37950 42065 1 + 0 ID=LTnewLM_120006400.1:CDS:1;Parent=LTnewLM_120006400.1 ### LTnewLM_12 . polypeptide 37950 42065 . + . ID=LTnewLM_120006400.1:pep;Derives_from=LTnewLM_120006400.1;orthologous_to=LmjF.12.0120_mRNA;ortholog_cluster=OG0000852;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 45748 47496 1 + . ID=LTnewLM_120006500 LTnewLM_12 AUGUSTUS mRNA 45748 47496 1 + . ID=LTnewLM_120006500.1;Parent=LTnewLM_120006500 LTnewLM_12 AUGUSTUS CDS 45748 47496 1 + 0 ID=LTnewLM_120006500.1:CDS:1;Parent=LTnewLM_120006500.1 ### LTnewLM_12 . polypeptide 45748 47496 . + . ID=LTnewLM_120006500.1:pep;Derives_from=LTnewLM_120006500.1;orthologous_to=LmjF.12.0130_mRNA;ortholog_cluster=OG0000853;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_12 Pfam protein_match 45772 46254 . + . Parent=LTnewLM_120006500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_12 Pfam protein_match 45775 46254 . + . Parent=LTnewLM_120006500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_12 Pfam protein_match 46714 46923 . + . Parent=LTnewLM_120006500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_12 . pseudogene 50411 51793 . + . ID=LTnewLM_120006600:pseudogene;coverage=1.0;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0140_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 50411 51793 . + . ID=LTnewLM_120006600.1;Parent=LTnewLM_120006600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 50411 51793 . + . ID=LTnewLM_120006600.1:pseudogenic_exon:1;Parent=LTnewLM_120006600.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 50411 51793 . + . ID=LTnewLM_120006600.1:pep;Derives_from=LTnewLM_120006600.1;orthologous_to=LmjF.12.0140_mRNA;ortholog_cluster=OG0007433;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 53331 57305 1 + . ID=LTnewLM_120006700 LTnewLM_12 AUGUSTUS mRNA 53331 57305 1 + . ID=LTnewLM_120006700.1;Parent=LTnewLM_120006700 LTnewLM_12 AUGUSTUS CDS 53331 57305 1 + 0 ID=LTnewLM_120006700.1:CDS:1;Parent=LTnewLM_120006700.1 ### LTnewLM_12 . polypeptide 53331 57305 . + . ID=LTnewLM_120006700.1:pep;Derives_from=LTnewLM_120006700.1;orthologous_to=LmjF.12.0150_mRNA;ortholog_cluster=OG0000854;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 58200 60686 1 + . ID=LTnewLM_120006800 LTnewLM_12 AUGUSTUS mRNA 58200 60686 1 + . ID=LTnewLM_120006800.1;Parent=LTnewLM_120006800 LTnewLM_12 AUGUSTUS CDS 58200 60686 1 + 0 ID=LTnewLM_120006800.1:CDS:1;Parent=LTnewLM_120006800.1 ### LTnewLM_12 . polypeptide 58200 60686 . + . ID=LTnewLM_120006800.1:pep;Derives_from=LTnewLM_120006800.1;orthologous_to=LmjF.12.0160_mRNA;ortholog_cluster=OG0000855;product=term%3DAlg9-like mannosyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03901;Ontology_term=GO:0016757 LTnewLM_12 Pfam protein_match 58257 59231 . + . Parent=LTnewLM_120006800.1:pep;Name=PF03901;signature_desc=Alg9-like mannosyltransferase family;Ontology_term=GO:0016757 LTnewLM_12 Pfam protein_match 59442 59621 . + . Parent=LTnewLM_120006800.1:pep;Name=PF03901;signature_desc=Alg9-like mannosyltransferase family;Ontology_term=GO:0016757 ### LTnewLM_12 AUGUSTUS gene 62233 63484 0.48 + . ID=LTnewLM_120006900 LTnewLM_12 AUGUSTUS mRNA 62233 63484 0.48 + . ID=LTnewLM_120006900.1;Parent=LTnewLM_120006900 LTnewLM_12 AUGUSTUS CDS 62233 62834 0.48 + 0 ID=LTnewLM_120006900.1:CDS:1;Parent=LTnewLM_120006900.1 LTnewLM_12 AUGUSTUS CDS 62887 63484 0.95 + 1 ID=LTnewLM_120006900.1:CDS:2;Parent=LTnewLM_120006900.1 ### LTnewLM_12 . polypeptide 62233 63484 . + . ID=LTnewLM_120006900.1:pep;Derives_from=LTnewLM_120006900.1;orthologous_to=LmjF.12.0170_mRNA;ortholog_cluster=OG0000856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 64155 66878 1 + . ID=LTnewLM_120007000 LTnewLM_12 AUGUSTUS mRNA 64155 66878 1 + . ID=LTnewLM_120007000.1;Parent=LTnewLM_120007000 LTnewLM_12 AUGUSTUS CDS 64155 66878 1 + 0 ID=LTnewLM_120007000.1:CDS:1;Parent=LTnewLM_120007000.1 ### LTnewLM_12 . polypeptide 64155 66878 . + . ID=LTnewLM_120007000.1:pep;Derives_from=LTnewLM_120007000.1;orthologous_to=LmjF.12.0180_mRNA;ortholog_cluster=OG0000857;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 67856 72661 1 + . ID=LTnewLM_120007100 LTnewLM_12 AUGUSTUS mRNA 67856 72661 1 + . ID=LTnewLM_120007100.1;Parent=LTnewLM_120007100 LTnewLM_12 AUGUSTUS CDS 67856 72661 1 + 0 ID=LTnewLM_120007100.1:CDS:1;Parent=LTnewLM_120007100.1 ### LTnewLM_12 . polypeptide 67856 72661 . + . ID=LTnewLM_120007100.1:pep;Derives_from=LTnewLM_120007100.1;orthologous_to=LmjF.12.0190_mRNA;ortholog_cluster=OG0000858;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_12 Pfam protein_match 69830 71485 . + . Parent=LTnewLM_120007100.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_12 AUGUSTUS gene 75734 78994 1 + . ID=LTnewLM_120007200 LTnewLM_12 AUGUSTUS mRNA 75734 78994 1 + . ID=LTnewLM_120007200.1;Parent=LTnewLM_120007200 LTnewLM_12 AUGUSTUS CDS 75734 78994 1 + 0 ID=LTnewLM_120007200.1:CDS:1;Parent=LTnewLM_120007200.1 ### LTnewLM_12 . polypeptide 75734 78994 . + . ID=LTnewLM_120007200.1:pep;Derives_from=LTnewLM_120007200.1;orthologous_to=LmjF.12.0200_mRNA;ortholog_cluster=OG0000859;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 80718 81953 1 + . ID=LTnewLM_120007300 LTnewLM_12 AUGUSTUS mRNA 80718 81953 1 + . ID=LTnewLM_120007300.1;Parent=LTnewLM_120007300 LTnewLM_12 AUGUSTUS CDS 80718 81953 1 + 0 ID=LTnewLM_120007300.1:CDS:1;Parent=LTnewLM_120007300.1 ### LTnewLM_12 . polypeptide 80718 81953 . + . ID=LTnewLM_120007300.1:pep;Derives_from=LTnewLM_120007300.1;orthologous_to=LmjF.12.0210_mRNA;ortholog_cluster=OG0000860;product=term%3DProteasomal ATPase OB C-terminal domain/AAA domain (dynein-related subfamily)/AAA domain (Cdc48 subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16450|Pfam:PF07728|Pfam:PF07724|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_12 Pfam protein_match 80961 81122 . + . Parent=LTnewLM_120007300.1:pep;Name=PF16450;signature_desc=Proteasomal ATPase OB C-terminal domain LTnewLM_12 Pfam protein_match 81294 81659 . + . Parent=LTnewLM_120007300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_12 Pfam protein_match 81297 81569 . + . Parent=LTnewLM_120007300.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_12 Pfam protein_match 81297 81695 . + . Parent=LTnewLM_120007300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_12 Pfam protein_match 81765 81863 . + . Parent=LTnewLM_120007300.1:pep;Name=PF17862;signature_desc=AAA+ lid domain ### LTnewLM_12 AUGUSTUS gene 82722 83609 1 + . ID=LTnewLM_120007400 LTnewLM_12 AUGUSTUS mRNA 82722 83609 1 + . ID=LTnewLM_120007400.1;Parent=LTnewLM_120007400 LTnewLM_12 AUGUSTUS CDS 82722 83609 1 + 0 ID=LTnewLM_120007400.1:CDS:1;Parent=LTnewLM_120007400.1 ### LTnewLM_12 . polypeptide 82722 83609 . + . ID=LTnewLM_120007400.1:pep;Derives_from=LTnewLM_120007400.1;orthologous_to=LmjF.12.0220_mRNA;ortholog_cluster=OG0000861;product=term%3DHydroxyacylglutathione hydrolase C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16123 LTnewLM_12 Pfam protein_match 83352 83579 . + . Parent=LTnewLM_120007400.1:pep;Name=PF16123;signature_desc=Hydroxyacylglutathione hydrolase C-terminus ### LTnewLM_12 AUGUSTUS gene 84882 89636 1 + . ID=LTnewLM_120007500 LTnewLM_12 AUGUSTUS mRNA 84882 89636 1 + . ID=LTnewLM_120007500.1;Parent=LTnewLM_120007500 LTnewLM_12 AUGUSTUS CDS 84882 89636 1 + 0 ID=LTnewLM_120007500.1:CDS:1;Parent=LTnewLM_120007500.1 ### LTnewLM_12 . polypeptide 84882 89636 . + . ID=LTnewLM_120007500.1:pep;Derives_from=LTnewLM_120007500.1;orthologous_to=LmjF.12.0230_mRNA;ortholog_cluster=OG0000862;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 Liftoff gene 90045 92150 . + . ID=LTnewLM_120007600;coverage=0.991;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0240_0 LTnewLM_12 Liftoff mRNA 90045 92150 . + . ID=LTnewLM_120007600.1;Parent=LTnewLM_120007600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 Liftoff CDS 90045 92150 . + 0 ID=LTnewLM_120007600.1:CDS:1;Parent=LTnewLM_120007600.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 90045 92150 . + . ID=LTnewLM_120007600.1:pep;Derives_from=LTnewLM_120007600.1;orthologous_to=LmjF.12.0240_mRNA;ortholog_cluster=OG0000863;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 94647 97001 1 + . ID=LTnewLM_120007700 LTnewLM_12 AUGUSTUS mRNA 94647 97001 1 + . ID=LTnewLM_120007700.1;Parent=LTnewLM_120007700 LTnewLM_12 AUGUSTUS CDS 94647 97001 1 + 0 ID=LTnewLM_120007700.1:CDS:1;Parent=LTnewLM_120007700.1 ### LTnewLM_12 . polypeptide 94647 97001 . + . ID=LTnewLM_120007700.1:pep;Derives_from=LTnewLM_120007700.1;orthologous_to=LmjF.12.0250_mRNA;ortholog_cluster=OG0000864;product=term%3DtRNA synthetases class I (C) catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01406 LTnewLM_12 Pfam protein_match 94806 96065 . + . Parent=LTnewLM_120007700.1:pep;Name=PF01406;signature_desc=tRNA synthetases class I (C) catalytic domain ### LTnewLM_12 AUGUSTUS gene 98427 99190 0.49 + . ID=LTnewLM_120007800 LTnewLM_12 AUGUSTUS mRNA 98427 99190 0.49 + . ID=LTnewLM_120007800.1;Parent=LTnewLM_120007800 LTnewLM_12 AUGUSTUS CDS 98427 98530 0.5 + 0 ID=LTnewLM_120007800.1:CDS:1;Parent=LTnewLM_120007800.1 LTnewLM_12 AUGUSTUS CDS 99073 99190 0.59 + 1 ID=LTnewLM_120007800.1:CDS:2;Parent=LTnewLM_120007800.1 ### LTnewLM_12 . polypeptide 98427 99190 . + . ID=LTnewLM_120007800.1:pep;Derives_from=LTnewLM_120007800.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 100367 109135 1.94 + . ID=LTnewLM_120007900 LTnewLM_12 AUGUSTUS mRNA 100367 109135 1 + . ID=LTnewLM_120007900.1;Parent=LTnewLM_120007900 LTnewLM_12 AUGUSTUS CDS 100367 109135 1 + 0 ID=LTnewLM_120007900.1:CDS:1;Parent=LTnewLM_120007900.1 LTnewLM_12 AUGUSTUS mRNA 105134 109135 0.94 + . ID=LTnewLM_120007900.2;Parent=LTnewLM_120007900 LTnewLM_12 AUGUSTUS CDS 105134 109135 0.94 + 0 ID=LTnewLM_120007900.2:CDS:1;Parent=LTnewLM_120007900.2 ### LTnewLM_12 . polypeptide 100367 109135 . + . ID=LTnewLM_120007900.1:pep;Derives_from=LTnewLM_120007900.1;orthologous_to=LTnewLM_120007900.2,LmjF.12.0260_mRNA;ortholog_cluster=OG0000318;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . polypeptide 105134 109135 . + . ID=LTnewLM_120007900.2:pep;Derives_from=LTnewLM_120007900.2;orthologous_to=LTnewLM_120007900.1,LmjF.12.0260_mRNA;ortholog_cluster=OG0000318;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 109831 111543 1 + . ID=LTnewLM_120008000 LTnewLM_12 AUGUSTUS mRNA 109831 111543 1 + . ID=LTnewLM_120008000.1;Parent=LTnewLM_120008000 LTnewLM_12 AUGUSTUS CDS 109831 111543 1 + 0 ID=LTnewLM_120008000.1:CDS:1;Parent=LTnewLM_120008000.1 ### LTnewLM_12 . polypeptide 109831 111543 . + . ID=LTnewLM_120008000.1:pep;Derives_from=LTnewLM_120008000.1;orthologous_to=LmjF.12.0270_mRNA;ortholog_cluster=OG0000865;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 112506 114620 1 + . ID=LTnewLM_120008100 LTnewLM_12 AUGUSTUS mRNA 112506 114620 1 + . ID=LTnewLM_120008100.1;Parent=LTnewLM_120008100 LTnewLM_12 AUGUSTUS CDS 112506 114620 1 + 0 ID=LTnewLM_120008100.1:CDS:1;Parent=LTnewLM_120008100.1 ### LTnewLM_12 . polypeptide 112506 114620 . + . ID=LTnewLM_120008100.1:pep;Derives_from=LTnewLM_120008100.1;orthologous_to=LmjF.12.0280_mRNA;ortholog_cluster=OG0000866;product=term%3DPyridoxal-dependent decarboxylase%2C pyridoxal binding domain/Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02784|Pfam:PF00278;Ontology_term=GO:0003824 LTnewLM_12 Pfam protein_match 113289 114008 . + . Parent=LTnewLM_120008100.1:pep;Name=PF02784;signature_desc=Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain;Ontology_term=GO:0003824 LTnewLM_12 Pfam protein_match 114081 114476 . + . Parent=LTnewLM_120008100.1:pep;Name=PF00278;signature_desc=Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain;Ontology_term=GO:0003824 ### LTnewLM_12 AUGUSTUS gene 119116 123962 0.82 + . ID=LTnewLM_120008200 LTnewLM_12 AUGUSTUS mRNA 119116 123962 0.46 + . ID=LTnewLM_120008200.1;Parent=LTnewLM_120008200 LTnewLM_12 AUGUSTUS CDS 119116 123578 0.49 + 0 ID=LTnewLM_120008200.1:CDS:1;Parent=LTnewLM_120008200.1 LTnewLM_12 AUGUSTUS CDS 123731 123962 0.48 + 1 ID=LTnewLM_120008200.1:CDS:2;Parent=LTnewLM_120008200.1 LTnewLM_12 AUGUSTUS mRNA 119788 123962 0.36 + . ID=LTnewLM_120008200.2;Parent=LTnewLM_120008200 LTnewLM_12 AUGUSTUS CDS 119788 123578 0.4 + 0 ID=LTnewLM_120008200.2:CDS:1;Parent=LTnewLM_120008200.2 LTnewLM_12 AUGUSTUS CDS 123731 123962 0.36 + 1 ID=LTnewLM_120008200.2:CDS:2;Parent=LTnewLM_120008200.2 ### LTnewLM_12 . polypeptide 119116 123962 . + . ID=LTnewLM_120008200.1:pep;Derives_from=LTnewLM_120008200.1;orthologous_to=LTnewLM_120008200.2,LmjF.12.0290_mRNA;ortholog_cluster=OG0000319;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . polypeptide 119788 123962 . + . ID=LTnewLM_120008200.2:pep;Derives_from=LTnewLM_120008200.2;orthologous_to=LTnewLM_120008200.1,LmjF.12.0290_mRNA;ortholog_cluster=OG0000319;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 124371 130067 1 + . ID=LTnewLM_120008300 LTnewLM_12 AUGUSTUS mRNA 124371 130067 1 + . ID=LTnewLM_120008300.1;Parent=LTnewLM_120008300 LTnewLM_12 AUGUSTUS CDS 124371 130067 1 + 0 ID=LTnewLM_120008300.1:CDS:1;Parent=LTnewLM_120008300.1 ### LTnewLM_12 . polypeptide 124371 130067 . + . ID=LTnewLM_120008300.1:pep;Derives_from=LTnewLM_120008300.1;orthologous_to=LmjF.12.0300_mRNA;ortholog_cluster=OG0000867;product=term%3DSAC3/GANP family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03399 LTnewLM_12 Pfam protein_match 124698 125660 . + . Parent=LTnewLM_120008300.1:pep;Name=PF03399;signature_desc=SAC3/GANP family ### LTnewLM_12 Liftoff gene 130473 132407 . + . ID=LTnewLM_120008400;coverage=1.0;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.12.0310_0 LTnewLM_12 Liftoff mRNA 130473 132407 . + . ID=LTnewLM_120008400.1;Parent=LTnewLM_120008400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_12 Liftoff CDS 130473 132407 . + 0 ID=LTnewLM_120008400.1:CDS:1;Parent=LTnewLM_120008400.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 130473 132407 . + . ID=LTnewLM_120008400.1:pep;Derives_from=LTnewLM_120008400.1;orthologous_to=LmjF.12.0310_mRNA;ortholog_cluster=OG0000868;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . polypeptide 134208 134676 . + . ID=LTnewLM_120008500.1:pep;Derives_from=LTnewLM_120008500.1;orthologous_to=LTnewLM_120008500.2,LmjF.12.0320_mRNA;ortholog_cluster=OG0000320;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 134208 143899 1.55 + . ID=LTnewLM_120008500 LTnewLM_12 AUGUSTUS mRNA 134208 134676 0.77 + . ID=LTnewLM_120008500.1;Parent=LTnewLM_120008500 LTnewLM_12 AUGUSTUS CDS 134208 134584 0.99 + 0 ID=LTnewLM_120008500.1:CDS:1;Parent=LTnewLM_120008500.1 LTnewLM_12 AUGUSTUS CDS 134646 134676 0.78 + 1 ID=LTnewLM_120008500.1:CDS:2;Parent=LTnewLM_120008500.1 LTnewLM_12 AUGUSTUS mRNA 134208 143899 0.78 + . ID=LTnewLM_120008500.2;Parent=LTnewLM_120008500 LTnewLM_12 AUGUSTUS CDS 134208 134651 0.82 + 0 ID=LTnewLM_120008500.2:CDS:1;Parent=LTnewLM_120008500.2 LTnewLM_12 AUGUSTUS CDS 134708 143899 0.79 + 0 ID=LTnewLM_120008500.2:CDS:2;Parent=LTnewLM_120008500.2 ### LTnewLM_12 . polypeptide 134208 143899 . + . ID=LTnewLM_120008500.2:pep;Derives_from=LTnewLM_120008500.2;orthologous_to=LTnewLM_120008500.1,LmjF.12.0320_mRNA;ortholog_cluster=OG0000320;product=term%3DMyotubularin-like phosphatase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06602 LTnewLM_12 Pfam protein_match 139770 140405 . + . Parent=LTnewLM_120008500.2:pep;Name=PF06602;signature_desc=Myotubularin-like phosphatase domain LTnewLM_12 Pfam protein_match 141201 142178 . + . Parent=LTnewLM_120008500.2:pep;Name=PF06602;signature_desc=Myotubularin-like phosphatase domain ### LTnewLM_12 AUGUSTUS gene 145098 149057 1 + . ID=LTnewLM_120008600 LTnewLM_12 AUGUSTUS mRNA 145098 149057 1 + . ID=LTnewLM_120008600.1;Parent=LTnewLM_120008600 LTnewLM_12 AUGUSTUS CDS 145098 149057 1 + 0 ID=LTnewLM_120008600.1:CDS:1;Parent=LTnewLM_120008600.1 ### LTnewLM_12 . polypeptide 145098 149057 . + . ID=LTnewLM_120008600.1:pep;Derives_from=LTnewLM_120008600.1;orthologous_to=LmjF.12.0330_mRNA;ortholog_cluster=OG0000869;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 150145 156618 . + . ID=LTnewLM_120008700:pseudogene;coverage=0.972;sequence_ID=0.889;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0340_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 150145 156618 . + . ID=LTnewLM_120008700.1;Parent=LTnewLM_120008700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 150145 156618 . + . ID=LTnewLM_120008700.1:pseudogenic_exon:1;Parent=LTnewLM_120008700.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 150145 156618 . + . ID=LTnewLM_120008700.1:pep;Derives_from=LTnewLM_120008700.1;orthologous_to=LmjF.12.0340_mRNA;ortholog_cluster=OG0007434;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 159309 161039 1 + . ID=LTnewLM_120008800 LTnewLM_12 AUGUSTUS mRNA 159309 161039 1 + . ID=LTnewLM_120008800.1;Parent=LTnewLM_120008800 LTnewLM_12 AUGUSTUS CDS 159309 161039 1 + 0 ID=LTnewLM_120008800.1:CDS:1;Parent=LTnewLM_120008800.1 ### LTnewLM_12 . polypeptide 159309 161039 . + . ID=LTnewLM_120008800.1:pep;Derives_from=LTnewLM_120008800.1;orthologous_to=LmjF.12.0350_mRNA;ortholog_cluster=OG0000870;product=term%3DNOT2 / NOT3 / NOT5 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04153;Ontology_term=GO:0005634,GO:0006355 LTnewLM_12 Pfam protein_match 160524 160844 . + . Parent=LTnewLM_120008800.1:pep;Name=PF04153;signature_desc=NOT2 / NOT3 / NOT5 family;Ontology_term=GO:0006355,GO:0005634 ### LTnewLM_12 AUGUSTUS gene 162991 164103 1 + . ID=LTnewLM_120008900 LTnewLM_12 AUGUSTUS mRNA 162991 164103 1 + . ID=LTnewLM_120008900.1;Parent=LTnewLM_120008900 LTnewLM_12 AUGUSTUS CDS 162991 164103 1 + 0 ID=LTnewLM_120008900.1:CDS:1;Parent=LTnewLM_120008900.1 ### LTnewLM_12 . polypeptide 162991 164103 . + . ID=LTnewLM_120008900.1:pep;Derives_from=LTnewLM_120008900.1;orthologous_to=LmjF.12.0360_mRNA;ortholog_cluster=OG0000871;product=term%3DGlutathione S-transferase%2C N-terminal domain/Glutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02798|Pfam:PF13417|Pfam:PF13409|Pfam:PF14497;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 163003 163215 . + . Parent=LTnewLM_120008900.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 163006 163215 . + . Parent=LTnewLM_120008900.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 163021 163215 . + . Parent=LTnewLM_120008900.1:pep;Name=PF13409;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 163885 164049 . + . Parent=LTnewLM_120008900.1:pep;Name=PF14497;signature_desc=Glutathione S-transferase%2C C-terminal domain ### LTnewLM_12 AUGUSTUS gene 166063 167016 1 + . ID=LTnewLM_120009000 LTnewLM_12 AUGUSTUS mRNA 166063 167016 1 + . ID=LTnewLM_120009000.1;Parent=LTnewLM_120009000 LTnewLM_12 AUGUSTUS CDS 166063 167016 1 + 0 ID=LTnewLM_120009000.1:CDS:1;Parent=LTnewLM_120009000.1 ### LTnewLM_12 . polypeptide 166063 167016 . + . ID=LTnewLM_120009000.1:pep;Derives_from=LTnewLM_120009000.1;orthologous_to=LmjF.12.0370_mRNA;ortholog_cluster=OG0000872;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 173791 178189 1.18 + . ID=LTnewLM_120009100 LTnewLM_12 AUGUSTUS mRNA 173791 178189 0.18 + . ID=LTnewLM_120009100.1;Parent=LTnewLM_120009100 LTnewLM_12 AUGUSTUS CDS 173791 176666 0.39 + 0 ID=LTnewLM_120009100.1:CDS:1;Parent=LTnewLM_120009100.1 LTnewLM_12 AUGUSTUS CDS 176719 178189 0.44 + 1 ID=LTnewLM_120009100.1:CDS:2;Parent=LTnewLM_120009100.1 LTnewLM_12 AUGUSTUS mRNA 176912 178189 1 + . ID=LTnewLM_120009100.2;Parent=LTnewLM_120009100 LTnewLM_12 AUGUSTUS CDS 176912 178189 1 + 0 ID=LTnewLM_120009100.2:CDS:1;Parent=LTnewLM_120009100.2 ### LTnewLM_12 . polypeptide 173791 178189 . + . ID=LTnewLM_120009100.1:pep;Derives_from=LTnewLM_120009100.1;orthologous_to=LTnewLM_120009100.2,LmjF.12.0380_mRNA;ortholog_cluster=OG0000321;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 176719 176787 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177010 177072 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177097 177165 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177424 177483 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177586 177648 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177712 177804 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177913 177960 . + . Parent=LTnewLM_120009100.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_12 . polypeptide 176912 178189 . + . ID=LTnewLM_120009100.2:pep;Derives_from=LTnewLM_120009100.2;orthologous_to=LTnewLM_120009100.1,LmjF.12.0380_mRNA;ortholog_cluster=OG0000321;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177062 177124 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177149 177217 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177476 177535 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177638 177700 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177764 177856 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_12 Pfam protein_match 177965 178012 . + . Parent=LTnewLM_120009100.2:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_12 AUGUSTUS gene 179290 180540 1 + . ID=LTnewLM_120009200 LTnewLM_12 AUGUSTUS mRNA 179290 180540 1 + . ID=LTnewLM_120009200.1;Parent=LTnewLM_120009200 LTnewLM_12 AUGUSTUS CDS 179290 180540 1 + 0 ID=LTnewLM_120009200.1:CDS:1;Parent=LTnewLM_120009200.1 ### LTnewLM_12 . polypeptide 179290 180540 . + . ID=LTnewLM_120009200.1:pep;Derives_from=LTnewLM_120009200.1;orthologous_to=LmjF.12.0390_mRNA;ortholog_cluster=OG0000873;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 182185 183330 1 + . ID=LTnewLM_120009300 LTnewLM_12 AUGUSTUS mRNA 182185 183330 1 + . ID=LTnewLM_120009300.1;Parent=LTnewLM_120009300 LTnewLM_12 AUGUSTUS CDS 182185 183330 1 + 0 ID=LTnewLM_120009300.1:CDS:1;Parent=LTnewLM_120009300.1 ### LTnewLM_12 . polypeptide 182185 183330 . + . ID=LTnewLM_120009300.1:pep;Derives_from=LTnewLM_120009300.1;orthologous_to=LmjF.12.0400_mRNA;ortholog_cluster=OG0000874;product=term%3DS1/P1 Nuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02265;Ontology_term=GO:0004519,GO:0006308,GO:0003676 LTnewLM_12 Pfam protein_match 182269 183069 . + . Parent=LTnewLM_120009300.1:pep;Name=PF02265;signature_desc=S1/P1 Nuclease;Ontology_term=GO:0003676,GO:0004519,GO:0006308 ### LTnewLM_12 AUGUSTUS gene 185926 187155 1 - . ID=LTnewLM_120009400 LTnewLM_12 AUGUSTUS mRNA 185926 187155 1 - . ID=LTnewLM_120009400.1;Parent=LTnewLM_120009400 LTnewLM_12 AUGUSTUS CDS 185926 187155 1 - 0 ID=LTnewLM_120009400.1:CDS:1;Parent=LTnewLM_120009400.1 ### LTnewLM_12 . polypeptide 185926 187155 . - . ID=LTnewLM_120009400.1:pep;Derives_from=LTnewLM_120009400.1;orthologous_to=LmjF.12.0405_mRNA;ortholog_cluster=OG0000875;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 188740 189225 1 - . ID=LTnewLM_120009500 LTnewLM_12 AUGUSTUS mRNA 188740 189225 1 - . ID=LTnewLM_120009500.1;Parent=LTnewLM_120009500 LTnewLM_12 AUGUSTUS CDS 188740 189225 1 - 0 ID=LTnewLM_120009500.1:CDS:1;Parent=LTnewLM_120009500.1 ### LTnewLM_12 . polypeptide 188740 189225 . - . ID=LTnewLM_120009500.1:pep;Derives_from=LTnewLM_120009500.1;orthologous_to=LmjF.12.0410_mRNA;ortholog_cluster=OG0000876;product=term%3DCXXC motif containing zinc binding protein%2C eukaryotic%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05907 LTnewLM_12 Pfam protein_match 188761 189192 . - . Parent=LTnewLM_120009500.1:pep;Name=PF05907;signature_desc=CXXC motif containing zinc binding protein%2C eukaryotic ### LTnewLM_12 . pseudogene 191096 191517 . - . ID=LTnewLM_120009600:pseudogene;coverage=0.990;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0420_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 191096 191517 . - . ID=LTnewLM_120009600.1;Parent=LTnewLM_120009600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 191096 191517 . - . ID=LTnewLM_120009600.1:pseudogenic_exon:1;Parent=LTnewLM_120009600.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 191096 191517 . - . ID=LTnewLM_120009600.1:pep;Derives_from=LTnewLM_120009600.1;orthologous_to=LmjF.12.0420_mRNA;ortholog_cluster=OG0007435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 192149 194275 1 - . ID=LTnewLM_120009700 LTnewLM_12 AUGUSTUS mRNA 192149 194275 1 - . ID=LTnewLM_120009700.1;Parent=LTnewLM_120009700 LTnewLM_12 AUGUSTUS CDS 192149 194275 1 - 0 ID=LTnewLM_120009700.1:CDS:1;Parent=LTnewLM_120009700.1 ### LTnewLM_12 . polypeptide 192149 194275 . - . ID=LTnewLM_120009700.1:pep;Derives_from=LTnewLM_120009700.1;orthologous_to=LmjF.12.0430_mRNA;ortholog_cluster=OG0000877;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 195213 197358 . - . ID=LTnewLM_120009800:pseudogene;coverage=0.992;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0440_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 195213 197358 . - . ID=LTnewLM_120009800.1;Parent=LTnewLM_120009800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 195213 197358 . - . ID=LTnewLM_120009800.1:pseudogenic_exon:1;Parent=LTnewLM_120009800.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 195213 197358 . - . ID=LTnewLM_120009800.1:pep;Derives_from=LTnewLM_120009800.1;orthologous_to=LmjF.12.0440_mRNA;ortholog_cluster=OG0007436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 198718 202170 1 - . ID=LTnewLM_120009900 LTnewLM_12 AUGUSTUS mRNA 198718 202170 1 - . ID=LTnewLM_120009900.1;Parent=LTnewLM_120009900 LTnewLM_12 AUGUSTUS CDS 198718 202170 1 - 0 ID=LTnewLM_120009900.1:CDS:1;Parent=LTnewLM_120009900.1 ### LTnewLM_12 . polypeptide 198718 202170 . - . ID=LTnewLM_120009900.1:pep;Derives_from=LTnewLM_120009900.1;orthologous_to=LmjF.12.0450_mRNA;ortholog_cluster=OG0000878;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 208698 211052 1 - . ID=LTnewLM_120010000 LTnewLM_12 AUGUSTUS mRNA 208698 211052 1 - . ID=LTnewLM_120010000.1;Parent=LTnewLM_120010000 LTnewLM_12 AUGUSTUS CDS 208698 211052 1 - 0 ID=LTnewLM_120010000.1:CDS:1;Parent=LTnewLM_120010000.1 ### LTnewLM_12 . polypeptide 208698 211052 . - . ID=LTnewLM_120010000.1:pep;Derives_from=LTnewLM_120010000.1;orthologous_to=LmjF.12.0460_mRNA;ortholog_cluster=OG0000879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 223520 225769 1 - . ID=LTnewLM_120010100 LTnewLM_12 AUGUSTUS mRNA 223520 225769 1 - . ID=LTnewLM_120010100.1;Parent=LTnewLM_120010100 LTnewLM_12 AUGUSTUS CDS 223520 225769 1 - 0 ID=LTnewLM_120010100.1:CDS:1;Parent=LTnewLM_120010100.1 ### LTnewLM_12 . polypeptide 223520 225769 . - . ID=LTnewLM_120010100.1:pep;Derives_from=LTnewLM_120010100.1;orthologous_to=LmjF.12.0470_mRNA;ortholog_cluster=OG0000880;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 233888 236082 . - . ID=LTnewLM_120010200:pseudogene;coverage=0.998;sequence_ID=0.894;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0480_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 233888 236082 . - . ID=LTnewLM_120010200.1;Parent=LTnewLM_120010200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 233888 236082 . - . ID=LTnewLM_120010200.1:pseudogenic_exon:1;Parent=LTnewLM_120010200.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 233888 236082 . - . ID=LTnewLM_120010200.1:pep;Derives_from=LTnewLM_120010200.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 241625 242113 0.92 - . ID=LTnewLM_120010300 LTnewLM_12 AUGUSTUS mRNA 241625 242113 0.92 - . ID=LTnewLM_120010300.1;Parent=LTnewLM_120010300 LTnewLM_12 AUGUSTUS CDS 241625 242113 0.92 - 0 ID=LTnewLM_120010300.1:CDS:1;Parent=LTnewLM_120010300.1 ### LTnewLM_12 . polypeptide 241625 242113 . - . ID=LTnewLM_120010300.1:pep;Derives_from=LTnewLM_120010300.1;orthologous_to=LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 261313 262266 1 - . ID=LTnewLM_120010400 LTnewLM_12 AUGUSTUS mRNA 261313 262266 1 - . ID=LTnewLM_120010400.1;Parent=LTnewLM_120010400 LTnewLM_12 AUGUSTUS CDS 261313 262266 1 - 0 ID=LTnewLM_120010400.1:CDS:1;Parent=LTnewLM_120010400.1 ### LTnewLM_12 . polypeptide 261313 262266 . - . ID=LTnewLM_120010400.1:pep;Derives_from=LTnewLM_120010400.1;orthologous_to=LmjF.12.0490_mRNA;ortholog_cluster=OG0000881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 268038 272459 1 - . ID=LTnewLM_120010500 LTnewLM_12 AUGUSTUS mRNA 268038 272459 1 - . ID=LTnewLM_120010500.1;Parent=LTnewLM_120010500 LTnewLM_12 AUGUSTUS CDS 268038 272459 1 - 0 ID=LTnewLM_120010500.1:CDS:1;Parent=LTnewLM_120010500.1 ### LTnewLM_12 . polypeptide 268038 272459 . - . ID=LTnewLM_120010500.1:pep;Derives_from=LTnewLM_120010500.1;orthologous_to=LmjF.12.0500_mRNA;ortholog_cluster=OG0000882;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 283457 284023 1 - . ID=LTnewLM_120010600 LTnewLM_12 AUGUSTUS mRNA 283457 284023 1 - . ID=LTnewLM_120010600.1;Parent=LTnewLM_120010600 LTnewLM_12 AUGUSTUS CDS 283457 284023 1 - 0 ID=LTnewLM_120010600.1:CDS:1;Parent=LTnewLM_120010600.1 ### LTnewLM_12 . polypeptide 283457 284023 . - . ID=LTnewLM_120010600.1:pep;Derives_from=LTnewLM_120010600.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 284569 284984 0.51 - . ID=LTnewLM_120010700 LTnewLM_12 AUGUSTUS mRNA 284569 284984 0.51 - . ID=LTnewLM_120010700.1;Parent=LTnewLM_120010700 LTnewLM_12 AUGUSTUS CDS 284569 284907 0.51 - 0 ID=LTnewLM_120010700.1:CDS:1;Parent=LTnewLM_120010700.1 LTnewLM_12 AUGUSTUS CDS 284967 284984 0.99 - 0 ID=LTnewLM_120010700.1:CDS:2;Parent=LTnewLM_120010700.1 ### LTnewLM_12 . polypeptide 284569 284984 . - . ID=LTnewLM_120010700.1:pep;Derives_from=LTnewLM_120010700.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 288730 291696 1 - . ID=LTnewLM_120010800 LTnewLM_12 AUGUSTUS mRNA 288730 291696 1 - . ID=LTnewLM_120010800.1;Parent=LTnewLM_120010800 LTnewLM_12 AUGUSTUS CDS 288730 291696 1 - 0 ID=LTnewLM_120010800.1:CDS:1;Parent=LTnewLM_120010800.1 ### LTnewLM_12 . polypeptide 288730 291696 . - . ID=LTnewLM_120010800.1:pep;Derives_from=LTnewLM_120010800.1;orthologous_to=LmjF.12.0510_mRNA;ortholog_cluster=OG0000883;product=term%3DWW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 291466 291552 . - . Parent=LTnewLM_120010800.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_12 AUGUSTUS gene 302106 302519 1 + . ID=LTnewLM_120010900 LTnewLM_12 AUGUSTUS mRNA 302106 302519 1 + . ID=LTnewLM_120010900.1;Parent=LTnewLM_120010900 LTnewLM_12 AUGUSTUS CDS 302106 302519 1 + 0 ID=LTnewLM_120010900.1:CDS:1;Parent=LTnewLM_120010900.1 ### LTnewLM_12 . polypeptide 302106 302519 . + . ID=LTnewLM_120010900.1:pep;Derives_from=LTnewLM_120010900.1;orthologous_to=LmjF.12.0520_mRNA;ortholog_cluster=OG0000884;product=term%3DATP synthase (F/14-kDa) subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01990;Ontology_term=GO:0034220 LTnewLM_12 Pfam protein_match 302148 302492 . + . Parent=LTnewLM_120010900.1:pep;Name=PF01990;signature_desc=ATP synthase (F/14-kDa) subunit;Ontology_term=GO:0034220 ### LTnewLM_12 AUGUSTUS gene 303069 304886 1 + . ID=LTnewLM_120011000 LTnewLM_12 AUGUSTUS mRNA 303069 304886 1 + . ID=LTnewLM_120011000.1;Parent=LTnewLM_120011000 LTnewLM_12 AUGUSTUS CDS 303069 304886 1 + 0 ID=LTnewLM_120011000.1:CDS:1;Parent=LTnewLM_120011000.1 ### LTnewLM_12 . polypeptide 303069 304886 . + . ID=LTnewLM_120011000.1:pep;Derives_from=LTnewLM_120011000.1;orthologous_to=LmjF.12.0530_mRNA;ortholog_cluster=OG0000885;product=term%3DPhosphoglucose isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00342;Ontology_term=GO:0006096,GO:0004347,GO:0006094 LTnewLM_12 Pfam protein_match 303369 304853 . + . Parent=LTnewLM_120011000.1:pep;Name=PF00342;signature_desc=Phosphoglucose isomerase;Ontology_term=GO:0004347,GO:0006094,GO:0006096 ### LTnewLM_12 AUGUSTUS gene 305921 306424 1 + . ID=LTnewLM_120011100 LTnewLM_12 AUGUSTUS mRNA 305921 306424 1 + . ID=LTnewLM_120011100.1;Parent=LTnewLM_120011100 LTnewLM_12 AUGUSTUS CDS 305921 306424 1 + 0 ID=LTnewLM_120011100.1:CDS:1;Parent=LTnewLM_120011100.1 ### LTnewLM_12 . polypeptide 305921 306424 . + . ID=LTnewLM_120011100.1:pep;Derives_from=LTnewLM_120011100.1;orthologous_to=LmjF.12.0540_mRNA;ortholog_cluster=OG0000886;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 308894 311392 1 + . ID=LTnewLM_120011200 LTnewLM_12 AUGUSTUS mRNA 308894 311392 1 + . ID=LTnewLM_120011200.1;Parent=LTnewLM_120011200 LTnewLM_12 AUGUSTUS CDS 308894 311392 1 + 0 ID=LTnewLM_120011200.1:CDS:1;Parent=LTnewLM_120011200.1 ### LTnewLM_12 . polypeptide 308894 311392 . + . ID=LTnewLM_120011200.1:pep;Derives_from=LTnewLM_120011200.1;orthologous_to=LmjF.12.0550_mRNA;ortholog_cluster=OG0000887;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 314662 318771 1 + . ID=LTnewLM_120011300 LTnewLM_12 AUGUSTUS mRNA 314662 318771 1 + . ID=LTnewLM_120011300.1;Parent=LTnewLM_120011300 LTnewLM_12 AUGUSTUS CDS 314662 318771 1 + 0 ID=LTnewLM_120011300.1:CDS:1;Parent=LTnewLM_120011300.1 ### LTnewLM_12 . polypeptide 314662 318771 . + . ID=LTnewLM_120011300.1:pep;Derives_from=LTnewLM_120011300.1;orthologous_to=LmjF.12.0560_mRNA;ortholog_cluster=OG0000888;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 320091 327052 . + . ID=LTnewLM_120011400:pseudogene;coverage=0.998;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0570_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 320091 327052 . + . ID=LTnewLM_120011400.1;Parent=LTnewLM_120011400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 320091 327052 . + . ID=LTnewLM_120011400.1:pseudogenic_exon:1;Parent=LTnewLM_120011400.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 320091 327052 . + . ID=LTnewLM_120011400.1:pep;Derives_from=LTnewLM_120011400.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 332912 338659 1 + . ID=LTnewLM_120011500 LTnewLM_12 AUGUSTUS mRNA 332912 338659 1 + . ID=LTnewLM_120011500.1;Parent=LTnewLM_120011500 LTnewLM_12 AUGUSTUS CDS 332912 338659 1 + 0 ID=LTnewLM_120011500.1:CDS:1;Parent=LTnewLM_120011500.1 ### LTnewLM_12 . polypeptide 332912 338659 . + . ID=LTnewLM_120011500.1:pep;Derives_from=LTnewLM_120011500.1;orthologous_to=LmjF.12.0570_mRNA,LmjF.12.0590_mRNA;ortholog_cluster=OG0000322;product=term%3DFusaric acid resistance protein-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13515 LTnewLM_12 Pfam protein_match 335195 335539 . + . Parent=LTnewLM_120011500.1:pep;Name=PF13515;signature_desc=Fusaric acid resistance protein-like ### LTnewLM_12 AUGUSTUS gene 340364 341920 1 + . ID=LTnewLM_120011600 LTnewLM_12 AUGUSTUS mRNA 340364 341920 1 + . ID=LTnewLM_120011600.1;Parent=LTnewLM_120011600 LTnewLM_12 AUGUSTUS CDS 340364 341920 1 + 0 ID=LTnewLM_120011600.1:CDS:1;Parent=LTnewLM_120011600.1 ### LTnewLM_12 . polypeptide 340364 341920 . + . ID=LTnewLM_120011600.1:pep;Derives_from=LTnewLM_120011600.1;orthologous_to=LmjF.12.0600_mRNA;ortholog_cluster=OG0000889;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 Liftoff gene 343149 346382 . + . ID=LTnewLM_120011700;coverage=0.988;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.12.0610_0 LTnewLM_12 Liftoff mRNA 343149 346382 . + . ID=LTnewLM_120011700.1;Parent=LTnewLM_120011700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_12 Liftoff CDS 343149 346382 . + 0 ID=LTnewLM_120011700.1:CDS:1;Parent=LTnewLM_120011700.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 343149 346382 . + . ID=LTnewLM_120011700.1:pep;Derives_from=LTnewLM_120011700.1;orthologous_to=LmjF.12.0610_mRNA;ortholog_cluster=OG0000890;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF13181|Pfam:PF13428;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 345144 345254 . + . Parent=LTnewLM_120011700.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_12 Pfam protein_match 345228 345320 . + . Parent=LTnewLM_120011700.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 345228 345356 . + . Parent=LTnewLM_120011700.1:pep;Name=PF13428;signature_desc=Tetratricopeptide repeat LTnewLM_12 Pfam protein_match 345240 345377 . + . Parent=LTnewLM_120011700.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_12 AUGUSTUS gene 347447 351820 0.94 + . ID=LTnewLM_120011800 LTnewLM_12 AUGUSTUS mRNA 347447 351820 0.94 + . ID=LTnewLM_120011800.1;Parent=LTnewLM_120011800 LTnewLM_12 AUGUSTUS CDS 347447 351820 0.94 + 0 ID=LTnewLM_120011800.1:CDS:1;Parent=LTnewLM_120011800.1 ### LTnewLM_12 . polypeptide 347447 351820 . + . ID=LTnewLM_120011800.1:pep;Derives_from=LTnewLM_120011800.1;orthologous_to=LmjF.12.0620_mRNA;ortholog_cluster=OG0000891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 353083 354576 1 + . ID=LTnewLM_120011900 LTnewLM_12 AUGUSTUS mRNA 353083 354576 1 + . ID=LTnewLM_120011900.1;Parent=LTnewLM_120011900 LTnewLM_12 AUGUSTUS CDS 353083 354576 1 + 0 ID=LTnewLM_120011900.1:CDS:1;Parent=LTnewLM_120011900.1 ### LTnewLM_12 . polypeptide 353083 354576 . + . ID=LTnewLM_120011900.1:pep;Derives_from=LTnewLM_120011900.1;orthologous_to=LmjF.12.0630_mRNA;ortholog_cluster=OG0000892;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_12 Pfam protein_match 353371 354534 . + . Parent=LTnewLM_120011900.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_12 AUGUSTUS gene 356305 358554 1 + . ID=LTnewLM_120012000 LTnewLM_12 AUGUSTUS mRNA 356305 358554 1 + . ID=LTnewLM_120012000.1;Parent=LTnewLM_120012000 LTnewLM_12 AUGUSTUS CDS 356305 358554 1 + 0 ID=LTnewLM_120012000.1:CDS:1;Parent=LTnewLM_120012000.1 ### LTnewLM_12 . polypeptide 356305 358554 . + . ID=LTnewLM_120012000.1:pep;Derives_from=LTnewLM_120012000.1;orthologous_to=LmjF.12.0640_mRNA;ortholog_cluster=OG0000893;product=term%3DPrim-pol family 5/Primase C terminal 2 (PriCT-2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18168|Pfam:PF08707;Ontology_term=GO:0016817 LTnewLM_12 Pfam protein_match 356908 357930 . + . Parent=LTnewLM_120012000.1:pep;Name=PF18168;signature_desc=Prim-pol family 5 LTnewLM_12 Pfam protein_match 358306 358482 . + . Parent=LTnewLM_120012000.1:pep;Name=PF08707;signature_desc=Primase C terminal 2 (PriCT-2);Ontology_term=GO:0016817 ### LTnewLM_12 . pseudogene 360878 363273 . + . ID=LTnewLM_120012100:pseudogene;coverage=0.963;sequence_ID=0.888;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0650_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 360878 363273 . + . ID=LTnewLM_120012100.1;Parent=LTnewLM_120012100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 360878 363273 . + . ID=LTnewLM_120012100.1:pseudogenic_exon:1;Parent=LTnewLM_120012100.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 360878 363273 . + . ID=LTnewLM_120012100.1:pep;Derives_from=LTnewLM_120012100.1;product=term%3Dhypothetical protein ### LTnewLM_12 AUGUSTUS gene 365325 368210 1 + . ID=LTnewLM_120012200 LTnewLM_12 AUGUSTUS mRNA 365325 368210 1 + . ID=LTnewLM_120012200.1;Parent=LTnewLM_120012200 LTnewLM_12 AUGUSTUS CDS 365325 368210 1 + 0 ID=LTnewLM_120012200.1:CDS:1;Parent=LTnewLM_120012200.1 ### LTnewLM_12 . polypeptide 365325 368210 . + . ID=LTnewLM_120012200.1:pep;Derives_from=LTnewLM_120012200.1;orthologous_to=LmjF.12.0660_mRNA;ortholog_cluster=OG0000894;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_12 Pfam protein_match 366375 366977 . + . Parent=LTnewLM_120012200.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_12 AUGUSTUS gene 370952 371374 1 + . ID=LTnewLM_120012300 LTnewLM_12 AUGUSTUS mRNA 370952 371374 1 + . ID=LTnewLM_120012300.1;Parent=LTnewLM_120012300 LTnewLM_12 AUGUSTUS CDS 370952 371374 1 + 0 ID=LTnewLM_120012300.1:CDS:1;Parent=LTnewLM_120012300.1 ### LTnewLM_12 . polypeptide 370952 371374 . + . ID=LTnewLM_120012300.1:pep;Derives_from=LTnewLM_120012300.1;orthologous_to=LTnewLM_290009500.1,LTnewLM_340010900.1;ortholog_cluster=OG0000323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 373664 374695 1 + . ID=LTnewLM_120012400 LTnewLM_12 AUGUSTUS mRNA 373664 374695 1 + . ID=LTnewLM_120012400.1;Parent=LTnewLM_120012400 LTnewLM_12 AUGUSTUS CDS 373664 374695 1 + 0 ID=LTnewLM_120012400.1:CDS:1;Parent=LTnewLM_120012400.1 ### LTnewLM_12 . polypeptide 373664 374695 . + . ID=LTnewLM_120012400.1:pep;Derives_from=LTnewLM_120012400.1;orthologous_to=LmjF.12.0670_mRNA;ortholog_cluster=OG0000895;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 377071 378369 1 + . ID=LTnewLM_120012500 LTnewLM_12 AUGUSTUS mRNA 377071 378369 1 + . ID=LTnewLM_120012500.1;Parent=LTnewLM_120012500 LTnewLM_12 AUGUSTUS CDS 377071 378369 1 + 0 ID=LTnewLM_120012500.1:CDS:1;Parent=LTnewLM_120012500.1 ### LTnewLM_12 . polypeptide 377071 378369 . + . ID=LTnewLM_120012500.1:pep;Derives_from=LTnewLM_120012500.1;orthologous_to=LmjF.12.0680_mRNA;ortholog_cluster=OG0000896;product=term%3DBardet-Biedl syndrome 5 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07289;Ontology_term=GO:0034464 LTnewLM_12 Pfam protein_match 377143 378348 . + . Parent=LTnewLM_120012500.1:pep;Name=PF07289;signature_desc=Bardet-Biedl syndrome 5 protein;Ontology_term=GO:0034464 ### LTnewLM_12 . pseudogene 379564 380064 . + . ID=LTnewLM_120012600:pseudogene;coverage=1.0;sequence_ID=0.964;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0690_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 379564 380064 . + . ID=LTnewLM_120012600.1;Parent=LTnewLM_120012600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 379564 380064 . + . ID=LTnewLM_120012600.1:pseudogenic_exon:1;Parent=LTnewLM_120012600.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 379564 380064 . + . ID=LTnewLM_120012600.1:pep;Derives_from=LTnewLM_120012600.1;orthologous_to=LmjF.12.0690_mRNA;ortholog_cluster=OG0007437;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 381123 383675 1 + . ID=LTnewLM_120012700 LTnewLM_12 AUGUSTUS mRNA 381123 383675 1 + . ID=LTnewLM_120012700.1;Parent=LTnewLM_120012700 LTnewLM_12 AUGUSTUS CDS 381123 383675 1 + 0 ID=LTnewLM_120012700.1:CDS:1;Parent=LTnewLM_120012700.1 ### LTnewLM_12 . polypeptide 381123 383675 . + . ID=LTnewLM_120012700.1:pep;Derives_from=LTnewLM_120012700.1;orthologous_to=LmjF.12.0700_mRNA;ortholog_cluster=OG0000897;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_12 Pfam protein_match 382635 382697 . + . Parent=LTnewLM_120012700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_12 Pfam protein_match 382719 382784 . + . Parent=LTnewLM_120012700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_12 Pfam protein_match 382887 382955 . + . Parent=LTnewLM_120012700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_12 AUGUSTUS gene 385018 385344 1 + . ID=LTnewLM_120012800 LTnewLM_12 AUGUSTUS mRNA 385018 385344 1 + . ID=LTnewLM_120012800.1;Parent=LTnewLM_120012800 LTnewLM_12 AUGUSTUS CDS 385018 385344 1 + 0 ID=LTnewLM_120012800.1:CDS:1;Parent=LTnewLM_120012800.1 ### LTnewLM_12 . polypeptide 385018 385344 . + . ID=LTnewLM_120012800.1:pep;Derives_from=LTnewLM_120012800.1;orthologous_to=LmjF.12.0710_mRNA;ortholog_cluster=OG0000898;product=term%3D2-hydroxy-palmitic acid dioxygenase Mpo1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06127 LTnewLM_12 Pfam protein_match 385057 385332 . + . Parent=LTnewLM_120012800.1:pep;Name=PF06127;signature_desc=2-hydroxy-palmitic acid dioxygenase Mpo1-like ### LTnewLM_12 . pseudogene 386666 387938 2.28e+03 + . ID=LTnewLM_120012900:pseudogene;has_internal_stop=false;has_frameshift=true;has_stop=true;Target=LmjF.12.0820:mRNA 38 483;original_prot_length=483 LTnewLM_12 . pseudogenic_transcript 386666 387938 . + . ID=LTnewLM_120012900.1;Parent=LTnewLM_120012900:pseudogene LTnewLM_12 . pseudogenic_exon 386666 387796 . + . ID=LTnewLM_120012900.1:pseudogenic_exon:1;Parent=LTnewLM_120012900.1 LTnewLM_12 . pseudogenic_exon 387799 387849 . + . ID=LTnewLM_120012900.1:pseudogenic_exon:2;Parent=LTnewLM_120012900.1 LTnewLM_12 . pseudogenic_exon 387852 387938 . + . ID=LTnewLM_120012900.1:pseudogenic_exon:3;Parent=LTnewLM_120012900.1 ### LTnewLM_12 . polypeptide 386666 387938 . + . ID=LTnewLM_120012900.1:pep;Derives_from=LTnewLM_120012900.1;orthologous_to=LTnewLM_120013200.1,LmjF.12.0715_mRNA,LmjF.12.0770_mRNA,LmjF.12.0800_mRNA,LmjF.12.0820_mRNA,LmjF.12.0840_mRNA,LmjF.12.0867_mRNA,LmjF.12.0895_mRNA,LmjF.12.0930_mRNA,LmjF.12.0950_mRNA,LmjF.12.0970_mRNA,LmjF.12.1030_mRNA,LmjF.12.1050_mRNA;ortholog_cluster=OG0000010;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 390422 392148 . + . ID=LTnewLM_120013000:pseudogene;coverage=0.915;sequence_ID=0.681;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0730_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 390422 392148 . + . ID=LTnewLM_120013000.1;Parent=LTnewLM_120013000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 390422 392148 . + . ID=LTnewLM_120013000.1:pseudogenic_exon:1;Parent=LTnewLM_120013000.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 390422 392148 . + . ID=LTnewLM_120013000.1:pep;Derives_from=LTnewLM_120013000.1;orthologous_to=LTnewLM_120013100.1;ortholog_cluster=OG0007438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 398142 399928 1.69e+03 + . ID=LTnewLM_120013100:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.12.0990:mRNA 1 608;original_prot_length=611 LTnewLM_12 . pseudogenic_transcript 398142 399928 . + . ID=LTnewLM_120013100.1;Parent=LTnewLM_120013100:pseudogene LTnewLM_12 . pseudogenic_exon 398142 398498 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:1;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 398500 398583 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:2;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 398586 399002 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:3;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 399004 399072 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:4;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 399074 399193 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:5;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 399196 399288 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:6;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 399291 399368 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:7;Parent=LTnewLM_120013100.1 LTnewLM_12 . pseudogenic_exon 399371 399928 . + . ID=LTnewLM_120013100.1:pseudogenic_exon:8;Parent=LTnewLM_120013100.1 ### LTnewLM_12 . polypeptide 398142 399928 . + . ID=LTnewLM_120013100.1:pep;Derives_from=LTnewLM_120013100.1;orthologous_to=LTnewLM_120013000.1;ortholog_cluster=OG0007438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 403313 404578 . + . ID=LTnewLM_120013200:pseudogene;coverage=0.873;sequence_ID=0.843;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.0930_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 403313 404578 . + . ID=LTnewLM_120013200.1;Parent=LTnewLM_120013200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 403313 404578 . + . ID=LTnewLM_120013200.1:pseudogenic_exon:1;Parent=LTnewLM_120013200.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 403313 404578 . + . ID=LTnewLM_120013200.1:pep;Derives_from=LTnewLM_120013200.1;orthologous_to=LTnewLM_120012900.1,LmjF.12.0715_mRNA,LmjF.12.0770_mRNA,LmjF.12.0800_mRNA,LmjF.12.0820_mRNA,LmjF.12.0840_mRNA,LmjF.12.0867_mRNA,LmjF.12.0895_mRNA,LmjF.12.0930_mRNA,LmjF.12.0950_mRNA,LmjF.12.0970_mRNA,LmjF.12.1030_mRNA,LmjF.12.1050_mRNA;ortholog_cluster=OG0000010;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 408584 413665 1 + . ID=LTnewLM_120013300 LTnewLM_12 AUGUSTUS mRNA 408584 413665 1 + . ID=LTnewLM_120013300.1;Parent=LTnewLM_120013300 LTnewLM_12 AUGUSTUS CDS 408584 413665 1 + 0 ID=LTnewLM_120013300.1:CDS:1;Parent=LTnewLM_120013300.1 ### LTnewLM_12 . polypeptide 408584 413665 . + . ID=LTnewLM_120013300.1:pep;Derives_from=LTnewLM_120013300.1;orthologous_to=LmjF.12.1100_mRNA;ortholog_cluster=OG0000899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 414321 416262 . + . ID=LTnewLM_120013400:pseudogene;coverage=0.995;sequence_ID=0.900;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1110_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 414321 416262 . + . ID=LTnewLM_120013400.1;Parent=LTnewLM_120013400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 414321 416262 . + . ID=LTnewLM_120013400.1:pseudogenic_exon:1;Parent=LTnewLM_120013400.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 414321 416262 . + . ID=LTnewLM_120013400.1:pep;Derives_from=LTnewLM_120013400.1;orthologous_to=LmjF.12.1110_mRNA;ortholog_cluster=OG0007439;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_12 Pfam protein_match 414333 414500 . + . Parent=LTnewLM_120013400.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_12 AUGUSTUS gene 419030 422902 1 + . ID=LTnewLM_120013500 LTnewLM_12 AUGUSTUS mRNA 419030 422902 1 + . ID=LTnewLM_120013500.1;Parent=LTnewLM_120013500 LTnewLM_12 AUGUSTUS CDS 419030 422902 1 + 0 ID=LTnewLM_120013500.1:CDS:1;Parent=LTnewLM_120013500.1 ### LTnewLM_12 . polypeptide 419030 422902 . + . ID=LTnewLM_120013500.1:pep;Derives_from=LTnewLM_120013500.1;orthologous_to=LmjF.12.1120_mRNA;ortholog_cluster=OG0000900;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 426054 426543 0.45 + . ID=LTnewLM_120013600 LTnewLM_12 AUGUSTUS mRNA 426054 426543 0.45 + . ID=LTnewLM_120013600.1;Parent=LTnewLM_120013600 LTnewLM_12 AUGUSTUS CDS 426054 426327 0.45 + 0 ID=LTnewLM_120013600.1:CDS:1;Parent=LTnewLM_120013600.1 LTnewLM_12 AUGUSTUS CDS 426425 426543 0.87 + 2 ID=LTnewLM_120013600.1:CDS:2;Parent=LTnewLM_120013600.1 ### LTnewLM_12 . polypeptide 426054 426543 . + . ID=LTnewLM_120013600.1:pep;Derives_from=LTnewLM_120013600.1;product=term%3Dhypothetical protein ### LTnewLM_12 . pseudogene 427321 428478 . + . ID=LTnewLM_120013700:pseudogene;coverage=1.0;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1130_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 427321 428478 . + . ID=LTnewLM_120013700.1;Parent=LTnewLM_120013700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 427321 428478 . + . ID=LTnewLM_120013700.1:pseudogenic_exon:1;Parent=LTnewLM_120013700.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 427321 428478 . + . ID=LTnewLM_120013700.1:pep;Derives_from=LTnewLM_120013700.1;orthologous_to=LmjF.12.1130_mRNA;ortholog_cluster=OG0007440;product=term%3DNADH:flavin oxidoreductase / NADH oxidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00724;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_12 Pfam protein_match 427354 428346 . + . Parent=LTnewLM_120013700.1:pep;Name=PF00724;signature_desc=NADH:flavin oxidoreductase / NADH oxidase family;Ontology_term=GO:0010181,GO:0016491,GO:0055114 ### LTnewLM_12 AUGUSTUS gene 432751 435237 1 + . ID=LTnewLM_120013800 LTnewLM_12 AUGUSTUS mRNA 432751 435237 1 + . ID=LTnewLM_120013800.1;Parent=LTnewLM_120013800 LTnewLM_12 AUGUSTUS CDS 432751 435237 1 + 0 ID=LTnewLM_120013800.1:CDS:1;Parent=LTnewLM_120013800.1 ### LTnewLM_12 . polypeptide 432751 435237 . + . ID=LTnewLM_120013800.1:pep;Derives_from=LTnewLM_120013800.1;orthologous_to=LmjF.12.1140_mRNA;ortholog_cluster=OG0000901;product=term%3DNADH:flavin oxidoreductase / NADH oxidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00724;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_12 Pfam protein_match 432787 433791 . + . Parent=LTnewLM_120013800.1:pep;Name=PF00724;signature_desc=NADH:flavin oxidoreductase / NADH oxidase family;Ontology_term=GO:0010181,GO:0016491,GO:0055114 LTnewLM_12 Pfam protein_match 434011 434811 . + . Parent=LTnewLM_120013800.1:pep;Name=PF00724;signature_desc=NADH:flavin oxidoreductase / NADH oxidase family;Ontology_term=GO:0010181,GO:0016491,GO:0055114 ### LTnewLM_12 . pseudogene 440511 443878 . + . ID=LTnewLM_120013900:pseudogene;coverage=1.0;sequence_ID=0.896;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1150_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 440511 443878 . + . ID=LTnewLM_120013900.1;Parent=LTnewLM_120013900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 440511 443878 . + . ID=LTnewLM_120013900.1:pseudogenic_exon:1;Parent=LTnewLM_120013900.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 440511 443878 . + . ID=LTnewLM_120013900.1:pep;Derives_from=LTnewLM_120013900.1;orthologous_to=LmjF.12.1150_mRNA;ortholog_cluster=OG0007441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 . pseudogene 445811 448656 . + . ID=LTnewLM_120014000:pseudogene;coverage=1.0;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1160_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 445811 448656 . + . ID=LTnewLM_120014000.1;Parent=LTnewLM_120014000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 445811 448656 . + . ID=LTnewLM_120014000.1:pseudogenic_exon:1;Parent=LTnewLM_120014000.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 445811 448656 . + . ID=LTnewLM_120014000.1:pep;Derives_from=LTnewLM_120014000.1;product=term%3Dhypothetical protein ### LTnewLM_12 . pseudogene 450832 453006 . + . ID=LTnewLM_120014100:pseudogene;coverage=1.0;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1170_0;has_internal_stop=true LTnewLM_12 . pseudogenic_transcript 450832 453006 . + . ID=LTnewLM_120014100.1;Parent=LTnewLM_120014100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_12 . pseudogenic_exon 450832 453006 . + . ID=LTnewLM_120014100.1:pseudogenic_exon:1;Parent=LTnewLM_120014100.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 450832 453006 . + . ID=LTnewLM_120014100.1:pep;Derives_from=LTnewLM_120014100.1;orthologous_to=LmjF.12.1160_mRNA,LmjF.12.1170_mRNA;ortholog_cluster=OG0000512;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 453935 456568 1 + . ID=LTnewLM_120014200 LTnewLM_12 AUGUSTUS mRNA 453935 456568 1 + . ID=LTnewLM_120014200.1;Parent=LTnewLM_120014200 LTnewLM_12 AUGUSTUS CDS 453935 456568 1 + 0 ID=LTnewLM_120014200.1:CDS:1;Parent=LTnewLM_120014200.1 ### LTnewLM_12 . polypeptide 453935 456568 . + . ID=LTnewLM_120014200.1:pep;Derives_from=LTnewLM_120014200.1;orthologous_to=LmjF.12.1180_mRNA;ortholog_cluster=OG0000902;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 458270 463096 1 + . ID=LTnewLM_120014300 LTnewLM_12 AUGUSTUS mRNA 458270 463096 1 + . ID=LTnewLM_120014300.1;Parent=LTnewLM_120014300 LTnewLM_12 AUGUSTUS CDS 458270 463096 1 + 0 ID=LTnewLM_120014300.1:CDS:1;Parent=LTnewLM_120014300.1 ### LTnewLM_12 . polypeptide 458270 463096 . + . ID=LTnewLM_120014300.1:pep;Derives_from=LTnewLM_120014300.1;orthologous_to=LmjF.12.1190_mRNA;ortholog_cluster=OG0000903;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 464608 466248 1 + . ID=LTnewLM_120014400 LTnewLM_12 AUGUSTUS mRNA 464608 466248 1 + . ID=LTnewLM_120014400.1;Parent=LTnewLM_120014400 LTnewLM_12 AUGUSTUS CDS 464608 466248 1 + 0 ID=LTnewLM_120014400.1:CDS:1;Parent=LTnewLM_120014400.1 ### LTnewLM_12 . polypeptide 464608 466248 . + . ID=LTnewLM_120014400.1:pep;Derives_from=LTnewLM_120014400.1;orthologous_to=LmjF.12.1200_mRNA;ortholog_cluster=OG0000904;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 471690 474719 1 + . ID=LTnewLM_120014500 LTnewLM_12 AUGUSTUS mRNA 471690 474719 1 + . ID=LTnewLM_120014500.1;Parent=LTnewLM_120014500 LTnewLM_12 AUGUSTUS CDS 471690 474719 1 + 0 ID=LTnewLM_120014500.1:CDS:1;Parent=LTnewLM_120014500.1 ### LTnewLM_12 . polypeptide 471690 474719 . + . ID=LTnewLM_120014500.1:pep;Derives_from=LTnewLM_120014500.1;orthologous_to=LmjF.12.1210_mRNA;ortholog_cluster=OG0000905;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 476450 480682 1 + . ID=LTnewLM_120014600 LTnewLM_12 AUGUSTUS mRNA 476450 480682 1 + . ID=LTnewLM_120014600.1;Parent=LTnewLM_120014600 LTnewLM_12 AUGUSTUS CDS 476450 480682 1 + 0 ID=LTnewLM_120014600.1:CDS:1;Parent=LTnewLM_120014600.1 ### LTnewLM_12 . polypeptide 476450 480682 . + . ID=LTnewLM_120014600.1:pep;Derives_from=LTnewLM_120014600.1;orthologous_to=LmjF.12.1220_mRNA;ortholog_cluster=OG0000906;product=term%3DMinichromosome loss protein%2C Mcl1%2C middle region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12341 LTnewLM_12 Pfam protein_match 478214 479089 . + . Parent=LTnewLM_120014600.1:pep;Name=PF12341;signature_desc=Minichromosome loss protein%2C Mcl1%2C middle region ### LTnewLM_12 AUGUSTUS gene 483798 484787 1 + . ID=LTnewLM_120014700 LTnewLM_12 AUGUSTUS mRNA 483798 484787 1 + . ID=LTnewLM_120014700.1;Parent=LTnewLM_120014700 LTnewLM_12 AUGUSTUS CDS 483798 484787 1 + 0 ID=LTnewLM_120014700.1:CDS:1;Parent=LTnewLM_120014700.1 ### LTnewLM_12 . polypeptide 483798 484787 . + . ID=LTnewLM_120014700.1:pep;Derives_from=LTnewLM_120014700.1;orthologous_to=LmjF.12.1230_mRNA;ortholog_cluster=OG0000907;product=term%3DSNARE associated Golgi protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09335 LTnewLM_12 Pfam protein_match 484191 484568 . + . Parent=LTnewLM_120014700.1:pep;Name=PF09335;signature_desc=SNARE associated Golgi protein ### LTnewLM_12 AUGUSTUS gene 485287 487914 1 + . ID=LTnewLM_120014800 LTnewLM_12 AUGUSTUS mRNA 485287 487914 1 + . ID=LTnewLM_120014800.1;Parent=LTnewLM_120014800 LTnewLM_12 AUGUSTUS CDS 485287 487914 1 + 0 ID=LTnewLM_120014800.1:CDS:1;Parent=LTnewLM_120014800.1 ### LTnewLM_12 . polypeptide 485287 487914 . + . ID=LTnewLM_120014800.1:pep;Derives_from=LTnewLM_120014800.1;orthologous_to=LmjF.12.1240_mRNA;ortholog_cluster=OG0000908;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 489893 494011 1 + . ID=LTnewLM_120014900 LTnewLM_12 AUGUSTUS mRNA 489893 494011 1 + . ID=LTnewLM_120014900.1;Parent=LTnewLM_120014900 LTnewLM_12 AUGUSTUS CDS 489893 494011 1 + 0 ID=LTnewLM_120014900.1:CDS:1;Parent=LTnewLM_120014900.1 ### LTnewLM_12 . polypeptide 489893 494011 . + . ID=LTnewLM_120014900.1:pep;Derives_from=LTnewLM_120014900.1;orthologous_to=LmjF.12.1250_mRNA;ortholog_cluster=OG0000909;product=term%3DPeptidase M1 N-terminal domain/Peptidase family M1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17900|Pfam:PF01433;Ontology_term=GO:0008237,GO:0008270 LTnewLM_12 Pfam protein_match 490409 490591 . + . Parent=LTnewLM_120014900.1:pep;Name=PF17900;signature_desc=Peptidase M1 N-terminal domain LTnewLM_12 Pfam protein_match 490889 491509 . + . Parent=LTnewLM_120014900.1:pep;Name=PF01433;signature_desc=Peptidase family M1 domain;Ontology_term=GO:0008237,GO:0008270 ### LTnewLM_12 AUGUSTUS gene 495234 496553 1 + . ID=LTnewLM_120015000 LTnewLM_12 AUGUSTUS mRNA 495234 496553 1 + . ID=LTnewLM_120015000.1;Parent=LTnewLM_120015000 LTnewLM_12 AUGUSTUS CDS 495234 496553 1 + 0 ID=LTnewLM_120015000.1:CDS:1;Parent=LTnewLM_120015000.1 ### LTnewLM_12 . polypeptide 495234 496553 . + . ID=LTnewLM_120015000.1:pep;Derives_from=LTnewLM_120015000.1;orthologous_to=LmjF.12.1260_mRNA;ortholog_cluster=OG0000910;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 499291 500397 1 + . ID=LTnewLM_120015100 LTnewLM_12 AUGUSTUS mRNA 499291 500397 1 + . ID=LTnewLM_120015100.1;Parent=LTnewLM_120015100 LTnewLM_12 AUGUSTUS CDS 499291 500397 1 + 0 ID=LTnewLM_120015100.1:CDS:1;Parent=LTnewLM_120015100.1 ### LTnewLM_12 . polypeptide 499291 500397 . + . ID=LTnewLM_120015100.1:pep;Derives_from=LTnewLM_120015100.1;orthologous_to=LmjF.12.1270_mRNA;ortholog_cluster=OG0000911;product=term%3DProtein of unknown function (DUF1698)/Tellurite resistance protein TehB/Methyltransferase domain/Ribosomal protein L11 methyltransferase (PrmA)/Methyltransferase small domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08003|Pfam:PF03848|Pfam:PF13489|Pfam:PF06325|Pfam:PF13847|Pfam:PF05175|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0005737,GO:0008152,GO:0006479,GO:0008168,GO:0008276 LTnewLM_12 Pfam protein_match 499453 499809 . + . Parent=LTnewLM_120015100.1:pep;Name=PF08003;signature_desc=Protein of unknown function (DUF1698) LTnewLM_12 Pfam protein_match 499492 499791 . + . Parent=LTnewLM_120015100.1:pep;Name=PF03848;signature_desc=Tellurite resistance protein TehB LTnewLM_12 Pfam protein_match 499495 499755 . + . Parent=LTnewLM_120015100.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_12 Pfam protein_match 499531 499761 . + . Parent=LTnewLM_120015100.1:pep;Name=PF06325;signature_desc=Ribosomal protein L11 methyltransferase (PrmA);Ontology_term=GO:0008276,GO:0006479,GO:0005737 LTnewLM_12 Pfam protein_match 499546 499776 . + . Parent=LTnewLM_120015100.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_12 Pfam protein_match 499549 499761 . + . Parent=LTnewLM_120015100.1:pep;Name=PF05175;signature_desc=Methyltransferase small domain;Ontology_term=GO:0008168 LTnewLM_12 Pfam protein_match 499558 499770 . + . Parent=LTnewLM_120015100.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_12 Pfam protein_match 499561 499770 . + . Parent=LTnewLM_120015100.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_12 Liftoff gene 501842 503806 . + . ID=LTnewLM_120015200;coverage=0.998;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.12.1280_0 LTnewLM_12 Liftoff mRNA 501842 503806 . + . ID=LTnewLM_120015200.1;Parent=LTnewLM_120015200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_12 Liftoff CDS 501842 503806 . + 0 ID=LTnewLM_120015200.1:CDS:1;Parent=LTnewLM_120015200.1;extra_copy_number=0 ### LTnewLM_12 . polypeptide 501842 503806 . + . ID=LTnewLM_120015200.1:pep;Derives_from=LTnewLM_120015200.1;orthologous_to=LmjF.12.1280_mRNA;ortholog_cluster=OG0000912;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 504842 505483 1 + . ID=LTnewLM_120015300 LTnewLM_12 AUGUSTUS mRNA 504842 505483 1 + . ID=LTnewLM_120015300.1;Parent=LTnewLM_120015300 LTnewLM_12 AUGUSTUS CDS 504842 505483 1 + 0 ID=LTnewLM_120015300.1:CDS:1;Parent=LTnewLM_120015300.1 ### LTnewLM_12 . polypeptide 504842 505483 . + . ID=LTnewLM_120015300.1:pep;Derives_from=LTnewLM_120015300.1;orthologous_to=LmjF.12.1290_mRNA;ortholog_cluster=OG0000913;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 505942 507810 1 + . ID=LTnewLM_120015400 LTnewLM_12 AUGUSTUS mRNA 505942 507810 1 + . ID=LTnewLM_120015400.1;Parent=LTnewLM_120015400 LTnewLM_12 AUGUSTUS CDS 505942 507810 1 + 0 ID=LTnewLM_120015400.1:CDS:1;Parent=LTnewLM_120015400.1 ### LTnewLM_12 . polypeptide 505942 507810 . + . ID=LTnewLM_120015400.1:pep;Derives_from=LTnewLM_120015400.1;orthologous_to=LmjF.12.1300_mRNA;ortholog_cluster=OG0000914;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_12 Pfam protein_match 506677 507252 . + . Parent=LTnewLM_120015400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_12 AUGUSTUS gene 508736 509180 0.59 + . ID=LTnewLM_120015500 LTnewLM_12 AUGUSTUS mRNA 508736 509180 0.59 + . ID=LTnewLM_120015500.1;Parent=LTnewLM_120015500 LTnewLM_12 AUGUSTUS CDS 508736 508761 0.63 + 0 ID=LTnewLM_120015500.1:CDS:1;Parent=LTnewLM_120015500.1 LTnewLM_12 AUGUSTUS CDS 508856 509180 0.96 + 1 ID=LTnewLM_120015500.1:CDS:2;Parent=LTnewLM_120015500.1 ### LTnewLM_12 . polypeptide 508736 509180 . + . ID=LTnewLM_120015500.1:pep;Derives_from=LTnewLM_120015500.1;orthologous_to=LmjF.12.1305_mRNA;ortholog_cluster=OG0000915;product=term%3DRibonuclease H2 non-catalytic subunit (Ylr154p-like)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08615 LTnewLM_12 Pfam protein_match 508781 509071 . + . Parent=LTnewLM_120015500.1:pep;Name=PF08615;signature_desc=Ribonuclease H2 non-catalytic subunit (Ylr154p-like) ### LTnewLM_12 AUGUSTUS gene 510009 512621 1 + . ID=LTnewLM_120015600 LTnewLM_12 AUGUSTUS mRNA 510009 512621 1 + . ID=LTnewLM_120015600.1;Parent=LTnewLM_120015600 LTnewLM_12 AUGUSTUS CDS 510009 512621 1 + 0 ID=LTnewLM_120015600.1:CDS:1;Parent=LTnewLM_120015600.1 ### LTnewLM_12 . polypeptide 510009 512621 . + . ID=LTnewLM_120015600.1:pep;Derives_from=LTnewLM_120015600.1;orthologous_to=LmjF.12.1310_mRNA;ortholog_cluster=OG0000916;product=term%3DFAM91 N-terminus/FAM91 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14647|Pfam:PF14648 LTnewLM_12 Pfam protein_match 510048 511061 . + . Parent=LTnewLM_120015600.1:pep;Name=PF14647;signature_desc=FAM91 N-terminus LTnewLM_12 Pfam protein_match 511194 512579 . + . Parent=LTnewLM_120015600.1:pep;Name=PF14648;signature_desc=FAM91 C-terminus ### LTnewLM_12 AUGUSTUS gene 513296 516211 1 + . ID=LTnewLM_120015700 LTnewLM_12 AUGUSTUS mRNA 513296 516211 1 + . ID=LTnewLM_120015700.1;Parent=LTnewLM_120015700 LTnewLM_12 AUGUSTUS CDS 513296 516211 1 + 0 ID=LTnewLM_120015700.1:CDS:1;Parent=LTnewLM_120015700.1 ### LTnewLM_12 . polypeptide 513296 516211 . + . ID=LTnewLM_120015700.1:pep;Derives_from=LTnewLM_120015700.1;orthologous_to=LmjF.12.1320_mRNA;ortholog_cluster=OG0000917;product=term%3DVacuolar sorting protein 39 domain 1/Vacuolar sorting protein 39 domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10366|Pfam:PF10367 LTnewLM_12 Pfam protein_match 514754 514975 . + . Parent=LTnewLM_120015700.1:pep;Name=PF10366;signature_desc=Vacuolar sorting protein 39 domain 1 LTnewLM_12 Pfam protein_match 515816 516136 . + . Parent=LTnewLM_120015700.1:pep;Name=PF10367;signature_desc=Vacuolar sorting protein 39 domain 2 ### LTnewLM_12 AUGUSTUS gene 517118 518980 1 + . ID=LTnewLM_120015800 LTnewLM_12 AUGUSTUS mRNA 517118 518980 1 + . ID=LTnewLM_120015800.1;Parent=LTnewLM_120015800 LTnewLM_12 AUGUSTUS CDS 517118 518980 1 + 0 ID=LTnewLM_120015800.1:CDS:1;Parent=LTnewLM_120015800.1 ### LTnewLM_12 . polypeptide 517118 518980 . + . ID=LTnewLM_120015800.1:pep;Derives_from=LTnewLM_120015800.1;orthologous_to=LmjF.12.1330_mRNA;ortholog_cluster=OG0000918;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 523878 525194 1 + . ID=LTnewLM_120015900 LTnewLM_12 AUGUSTUS mRNA 523878 525194 1 + . ID=LTnewLM_120015900.1;Parent=LTnewLM_120015900 LTnewLM_12 AUGUSTUS CDS 523878 525194 1 + 0 ID=LTnewLM_120015900.1:CDS:1;Parent=LTnewLM_120015900.1 ### LTnewLM_12 . polypeptide 523878 525194 . + . ID=LTnewLM_120015900.1:pep;Derives_from=LTnewLM_120015900.1;orthologous_to=LmjF.12.1340_mRNA;ortholog_cluster=OG0000919;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_12 AUGUSTUS gene 525847 526809 1 + . ID=LTnewLM_120016000 LTnewLM_12 AUGUSTUS mRNA 525847 526809 1 + . ID=LTnewLM_120016000.1;Parent=LTnewLM_120016000 LTnewLM_12 AUGUSTUS CDS 525847 526809 1 + 0 ID=LTnewLM_120016000.1:CDS:1;Parent=LTnewLM_120016000.1 ### LTnewLM_12 . polypeptide 525847 526809 . + . ID=LTnewLM_120016000.1:pep;Derives_from=LTnewLM_120016000.1;product=term%3DLysine methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294 LTnewLM_12 Pfam protein_match 526039 526533 . + . Parent=LTnewLM_120016000.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_13 . contig 1 642182 . + . Name=LTnewLM_CTG000012 LTnewLM_13 AUGUSTUS gene 2582 4534 1 - . ID=LTnewLM_130005000 LTnewLM_13 AUGUSTUS mRNA 2582 4534 1 - . ID=LTnewLM_130005000.1;Parent=LTnewLM_130005000 LTnewLM_13 AUGUSTUS CDS 2582 4534 1 - 0 ID=LTnewLM_130005000.1:CDS:1;Parent=LTnewLM_130005000.1 ### LTnewLM_13 . polypeptide 2582 4534 . - . ID=LTnewLM_130005000.1:pep;Derives_from=LTnewLM_130005000.1;orthologous_to=LmjF.13.0010_mRNA;ortholog_cluster=OG0000920;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 3221 3328 . - . Parent=LTnewLM_130005000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_13 AUGUSTUS gene 6109 7284 1 - . ID=LTnewLM_130005100 LTnewLM_13 AUGUSTUS mRNA 6109 7284 1 - . ID=LTnewLM_130005100.1;Parent=LTnewLM_130005100 LTnewLM_13 AUGUSTUS CDS 6109 7284 1 - 0 ID=LTnewLM_130005100.1:CDS:1;Parent=LTnewLM_130005100.1 ### LTnewLM_13 . polypeptide 6109 7284 . - . ID=LTnewLM_130005100.1:pep;Derives_from=LTnewLM_130005100.1;orthologous_to=LmjF.13.0020_mRNA;ortholog_cluster=OG0000921;product=term%3DPutative undecaprenyl diphosphate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01255;Ontology_term=GO:0016765 LTnewLM_13 Pfam protein_match 6118 6843 . - . Parent=LTnewLM_130005100.1:pep;Name=PF01255;signature_desc=Putative undecaprenyl diphosphate synthase;Ontology_term=GO:0016765 ### LTnewLM_13 AUGUSTUS gene 7902 8507 1 - . ID=LTnewLM_130005200 LTnewLM_13 AUGUSTUS mRNA 7902 8507 1 - . ID=LTnewLM_130005200.1;Parent=LTnewLM_130005200 LTnewLM_13 AUGUSTUS CDS 7902 8507 1 - 0 ID=LTnewLM_130005200.1:CDS:1;Parent=LTnewLM_130005200.1 ### LTnewLM_13 . polypeptide 7902 8507 . - . ID=LTnewLM_130005200.1:pep;Derives_from=LTnewLM_130005200.1;orthologous_to=LmjF.13.0030_mRNA;ortholog_cluster=OG0000922;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 9331 10377 1 - . ID=LTnewLM_130005300 LTnewLM_13 AUGUSTUS mRNA 9331 10377 1 - . ID=LTnewLM_130005300.1;Parent=LTnewLM_130005300 LTnewLM_13 AUGUSTUS CDS 9331 10377 1 - 0 ID=LTnewLM_130005300.1:CDS:1;Parent=LTnewLM_130005300.1 ### LTnewLM_13 . polypeptide 9331 10377 . - . ID=LTnewLM_130005300.1:pep;Derives_from=LTnewLM_130005300.1;orthologous_to=LmjF.13.0040_mRNA;ortholog_cluster=OG0000923;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 10941 11831 1 - . ID=LTnewLM_130005400 LTnewLM_13 AUGUSTUS mRNA 10941 11831 1 - . ID=LTnewLM_130005400.1;Parent=LTnewLM_130005400 LTnewLM_13 AUGUSTUS CDS 10941 11831 1 - 0 ID=LTnewLM_130005400.1:CDS:1;Parent=LTnewLM_130005400.1 ### LTnewLM_13 . polypeptide 10941 11831 . - . ID=LTnewLM_130005400.1:pep;Derives_from=LTnewLM_130005400.1;orthologous_to=LmjF.13.0050_mRNA;ortholog_cluster=OG0000924;product=term%3DRibonuclease HII%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01351 LTnewLM_13 Pfam protein_match 11019 11777 . - . Parent=LTnewLM_130005400.1:pep;Name=PF01351;signature_desc=Ribonuclease HII ### LTnewLM_13 AUGUSTUS gene 12585 13970 1 - . ID=LTnewLM_130005500 LTnewLM_13 AUGUSTUS mRNA 12585 13970 1 - . ID=LTnewLM_130005500.1;Parent=LTnewLM_130005500 LTnewLM_13 AUGUSTUS CDS 12585 13970 1 - 0 ID=LTnewLM_130005500.1:CDS:1;Parent=LTnewLM_130005500.1 ### LTnewLM_13 . polypeptide 12585 13970 . - . ID=LTnewLM_130005500.1:pep;Derives_from=LTnewLM_130005500.1;orthologous_to=LmjF.13.0060_mRNA;ortholog_cluster=OG0000925;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 14842 15432 1 - . ID=LTnewLM_130005600 LTnewLM_13 AUGUSTUS mRNA 14842 15432 1 - . ID=LTnewLM_130005600.1;Parent=LTnewLM_130005600 LTnewLM_13 AUGUSTUS CDS 14842 15432 1 - 0 ID=LTnewLM_130005600.1:CDS:1;Parent=LTnewLM_130005600.1 ### LTnewLM_13 . polypeptide 14842 15432 . - . ID=LTnewLM_130005600.1:pep;Derives_from=LTnewLM_130005600.1;orthologous_to=LmjF.13.0070_mRNA;ortholog_cluster=OG0000926;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 16218 20510 1 - . ID=LTnewLM_130005700 LTnewLM_13 AUGUSTUS mRNA 16218 20510 1 - . ID=LTnewLM_130005700.1;Parent=LTnewLM_130005700 LTnewLM_13 AUGUSTUS CDS 16218 20510 1 - 0 ID=LTnewLM_130005700.1:CDS:1;Parent=LTnewLM_130005700.1 ### LTnewLM_13 . polypeptide 16218 20510 . - . ID=LTnewLM_130005700.1:pep;Derives_from=LTnewLM_130005700.1;orthologous_to=LmjF.13.0080_mRNA;ortholog_cluster=OG0000927;product=term%3DExonuclease/DNA polymerase family A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929|Pfam:PF00476;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_13 Pfam protein_match 16428 17450 . - . Parent=LTnewLM_130005700.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 LTnewLM_13 Pfam protein_match 17667 18215 . - . Parent=LTnewLM_130005700.1:pep;Name=PF00929;signature_desc=Exonuclease ### LTnewLM_13 AUGUSTUS gene 24047 25558 1 - . ID=LTnewLM_130005800 LTnewLM_13 AUGUSTUS mRNA 24047 25558 1 - . ID=LTnewLM_130005800.1;Parent=LTnewLM_130005800 LTnewLM_13 AUGUSTUS CDS 24047 25558 1 - 0 ID=LTnewLM_130005800.1:CDS:1;Parent=LTnewLM_130005800.1 ### LTnewLM_13 . polypeptide 24047 25558 . - . ID=LTnewLM_130005800.1:pep;Derives_from=LTnewLM_130005800.1;orthologous_to=LTnewLM_270017800.1,LmjF.13.0090_mRNA;ortholog_cluster=OG0000324;product=term%3DCarboxypeptidase Taq (M32) metallopeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02074;Ontology_term=GO:0006508,GO:0004181 LTnewLM_13 Pfam protein_match 24068 25540 . - . Parent=LTnewLM_130005800.1:pep;Name=PF02074;signature_desc=Carboxypeptidase Taq (M32) metallopeptidase;Ontology_term=GO:0004181,GO:0006508 ### LTnewLM_13 AUGUSTUS gene 29528 30835 1 - . ID=LTnewLM_130005900 LTnewLM_13 AUGUSTUS mRNA 29528 30835 1 - . ID=LTnewLM_130005900.1;Parent=LTnewLM_130005900 LTnewLM_13 AUGUSTUS CDS 29528 30835 1 - 0 ID=LTnewLM_130005900.1:CDS:1;Parent=LTnewLM_130005900.1 ### LTnewLM_13 . polypeptide 29528 30835 . - . ID=LTnewLM_130005900.1:pep;Derives_from=LTnewLM_130005900.1;orthologous_to=LmjF.13.0100_mRNA;ortholog_cluster=OG0000928;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 31993 33051 1 - . ID=LTnewLM_130006000 LTnewLM_13 AUGUSTUS mRNA 31993 33051 1 - . ID=LTnewLM_130006000.1;Parent=LTnewLM_130006000 LTnewLM_13 AUGUSTUS CDS 31993 33051 1 - 0 ID=LTnewLM_130006000.1:CDS:1;Parent=LTnewLM_130006000.1 ### LTnewLM_13 . polypeptide 31993 33051 . - . ID=LTnewLM_130006000.1:pep;Derives_from=LTnewLM_130006000.1;orthologous_to=LmjF.13.0110_mRNA;ortholog_cluster=OG0000929;product=term%3DSURF1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02104;Ontology_term=GO:0016020 LTnewLM_13 Pfam protein_match 32269 33018 . - . Parent=LTnewLM_130006000.1:pep;Name=PF02104;signature_desc=SURF1 family;Ontology_term=GO:0016020 ### LTnewLM_13 AUGUSTUS gene 34238 34708 1 - . ID=LTnewLM_130006100 LTnewLM_13 AUGUSTUS mRNA 34238 34708 1 - . ID=LTnewLM_130006100.1;Parent=LTnewLM_130006100 LTnewLM_13 AUGUSTUS CDS 34238 34708 1 - 0 ID=LTnewLM_130006100.1:CDS:1;Parent=LTnewLM_130006100.1 ### LTnewLM_13 . polypeptide 34238 34708 . - . ID=LTnewLM_130006100.1:pep;Derives_from=LTnewLM_130006100.1;orthologous_to=LmjF.13.0120_mRNA;ortholog_cluster=OG0000930;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 38756 40936 1 - . ID=LTnewLM_130006200 LTnewLM_13 AUGUSTUS mRNA 38756 40936 1 - . ID=LTnewLM_130006200.1;Parent=LTnewLM_130006200 LTnewLM_13 AUGUSTUS CDS 38756 40936 1 - 0 ID=LTnewLM_130006200.1:CDS:1;Parent=LTnewLM_130006200.1 ### LTnewLM_13 . polypeptide 38756 40936 . - . ID=LTnewLM_130006200.1:pep;Derives_from=LTnewLM_130006200.1;orthologous_to=LmjF.13.0130_mRNA;ortholog_cluster=OG0000931;product=term%3DKinesin motor domain/Microtubule binding/TRAF-type zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796|Pfam:PF02176;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_13 Pfam protein_match 39515 39649 . - . Parent=LTnewLM_130006200.1:pep;Name=PF02176;signature_desc=TRAF-type zinc finger LTnewLM_13 Pfam protein_match 39887 40720 . - . Parent=LTnewLM_130006200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_13 Pfam protein_match 40421 40702 . - . Parent=LTnewLM_130006200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_13 AUGUSTUS gene 42084 42848 1 - . ID=LTnewLM_130006300 LTnewLM_13 AUGUSTUS mRNA 42084 42848 1 - . ID=LTnewLM_130006300.1;Parent=LTnewLM_130006300 LTnewLM_13 AUGUSTUS CDS 42084 42848 1 - 0 ID=LTnewLM_130006300.1:CDS:1;Parent=LTnewLM_130006300.1 ### LTnewLM_13 . polypeptide 42084 42848 . - . ID=LTnewLM_130006300.1:pep;Derives_from=LTnewLM_130006300.1;orthologous_to=LmjF.13.0140_mRNA;ortholog_cluster=OG0000932;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 43480 44901 1 - . ID=LTnewLM_130006400 LTnewLM_13 AUGUSTUS mRNA 43480 44901 1 - . ID=LTnewLM_130006400.1;Parent=LTnewLM_130006400 LTnewLM_13 AUGUSTUS CDS 43480 44901 1 - 0 ID=LTnewLM_130006400.1:CDS:1;Parent=LTnewLM_130006400.1 ### LTnewLM_13 . polypeptide 43480 44901 . - . ID=LTnewLM_130006400.1:pep;Derives_from=LTnewLM_130006400.1;orthologous_to=LmjF.13.0150_mRNA;ortholog_cluster=OG0000933;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 46874 48382 1 - . ID=LTnewLM_130006500 LTnewLM_13 AUGUSTUS mRNA 46874 48382 1 - . ID=LTnewLM_130006500.1;Parent=LTnewLM_130006500 LTnewLM_13 AUGUSTUS CDS 46874 48382 1 - 0 ID=LTnewLM_130006500.1:CDS:1;Parent=LTnewLM_130006500.1 ### LTnewLM_13 . polypeptide 46874 48382 . - . ID=LTnewLM_130006500.1:pep;Derives_from=LTnewLM_130006500.1;orthologous_to=LmjF.13.0160_mRNA;ortholog_cluster=OG0000934;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_13 Pfam protein_match 46988 47233 . - . Parent=LTnewLM_130006500.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_13 Pfam protein_match 47351 47596 . - . Parent=LTnewLM_130006500.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_13 AUGUSTUS gene 49331 51202 1 - . ID=LTnewLM_130006600 LTnewLM_13 AUGUSTUS mRNA 49331 51202 1 - . ID=LTnewLM_130006600.1;Parent=LTnewLM_130006600 LTnewLM_13 AUGUSTUS CDS 49331 51202 1 - 0 ID=LTnewLM_130006600.1:CDS:1;Parent=LTnewLM_130006600.1 ### LTnewLM_13 . polypeptide 49331 51202 . - . ID=LTnewLM_130006600.1:pep;Derives_from=LTnewLM_130006600.1;orthologous_to=LmjF.13.0170_mRNA;ortholog_cluster=OG0000935;product=term%3DMOZ/SAS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01853;Ontology_term=GO:0016747,GO:0005634,GO:0006355 LTnewLM_13 Pfam protein_match 49853 50125 . - . Parent=LTnewLM_130006600.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 LTnewLM_13 Pfam protein_match 50270 50437 . - . Parent=LTnewLM_130006600.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 ### LTnewLM_13 AUGUSTUS gene 51681 53064 0.47 - . ID=LTnewLM_130006700 LTnewLM_13 AUGUSTUS mRNA 51681 53064 0.47 - . ID=LTnewLM_130006700.1;Parent=LTnewLM_130006700 LTnewLM_13 AUGUSTUS CDS 51681 51694 0.47 - 2 ID=LTnewLM_130006700.1:CDS:1;Parent=LTnewLM_130006700.1 LTnewLM_13 AUGUSTUS CDS 51834 53064 0.66 - 0 ID=LTnewLM_130006700.1:CDS:2;Parent=LTnewLM_130006700.1 ### LTnewLM_13 . polypeptide 51681 53064 . - . ID=LTnewLM_130006700.1:pep;Derives_from=LTnewLM_130006700.1;orthologous_to=LmjF.13.0180_mRNA;ortholog_cluster=OG0000936;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13424 LTnewLM_13 Pfam protein_match 51868 52083 . - . Parent=LTnewLM_130006700.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat ### LTnewLM_13 AUGUSTUS gene 57956 58702 1 - . ID=LTnewLM_130006800 LTnewLM_13 AUGUSTUS mRNA 57956 58702 1 - . ID=LTnewLM_130006800.1;Parent=LTnewLM_130006800 LTnewLM_13 AUGUSTUS CDS 57956 58702 1 - 0 ID=LTnewLM_130006800.1:CDS:1;Parent=LTnewLM_130006800.1 ### LTnewLM_13 . polypeptide 57956 58702 . - . ID=LTnewLM_130006800.1:pep;Derives_from=LTnewLM_130006800.1;orthologous_to=LmjF.13.0190_mRNA;ortholog_cluster=OG0000937;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 62096 64525 1 - . ID=LTnewLM_130006900 LTnewLM_13 AUGUSTUS mRNA 62096 64525 1 - . ID=LTnewLM_130006900.1;Parent=LTnewLM_130006900 LTnewLM_13 AUGUSTUS CDS 62096 64525 1 - 0 ID=LTnewLM_130006900.1:CDS:1;Parent=LTnewLM_130006900.1 ### LTnewLM_13 . polypeptide 62096 64525 . - . ID=LTnewLM_130006900.1:pep;Derives_from=LTnewLM_130006900.1;orthologous_to=LmjF.13.0200_mRNA;ortholog_cluster=OG0000938;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_13 Pfam protein_match 62765 63040 . - . Parent=LTnewLM_130006900.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_13 AUGUSTUS gene 66948 69365 1 - . ID=LTnewLM_130007000 LTnewLM_13 AUGUSTUS mRNA 66948 69365 1 - . ID=LTnewLM_130007000.1;Parent=LTnewLM_130007000 LTnewLM_13 AUGUSTUS CDS 66948 69365 1 - 0 ID=LTnewLM_130007000.1:CDS:1;Parent=LTnewLM_130007000.1 ### LTnewLM_13 . polypeptide 66948 69365 . - . ID=LTnewLM_130007000.1:pep;Derives_from=LTnewLM_130007000.1;orthologous_to=LmjF.13.0210_mRNA;ortholog_cluster=OG0000939;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_13 Pfam protein_match 67848 68189 . - . Parent=LTnewLM_130007000.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_13 AUGUSTUS gene 70584 71219 1 - . ID=LTnewLM_130007100 LTnewLM_13 AUGUSTUS mRNA 70584 71219 1 - . ID=LTnewLM_130007100.1;Parent=LTnewLM_130007100 LTnewLM_13 AUGUSTUS CDS 70584 71219 1 - 0 ID=LTnewLM_130007100.1:CDS:1;Parent=LTnewLM_130007100.1 ### LTnewLM_13 . polypeptide 70584 71219 . - . ID=LTnewLM_130007100.1:pep;Derives_from=LTnewLM_130007100.1;orthologous_to=LmjF.13.0220_mRNA;ortholog_cluster=OG0000940;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071|Pfam:PF01926;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_13 Pfam protein_match 70680 71156 . - . Parent=LTnewLM_130007100.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_13 Pfam protein_match 70689 71174 . - . Parent=LTnewLM_130007100.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_13 Pfam protein_match 70794 71156 . - . Parent=LTnewLM_130007100.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_13 Pfam protein_match 70815 71156 . - . Parent=LTnewLM_130007100.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_13 Pfam protein_match 70851 71153 . - . Parent=LTnewLM_130007100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_13 AUGUSTUS gene 72902 74161 1 - . ID=LTnewLM_130007200 LTnewLM_13 AUGUSTUS mRNA 72902 74161 1 - . ID=LTnewLM_130007200.1;Parent=LTnewLM_130007200 LTnewLM_13 AUGUSTUS CDS 72902 74161 1 - 0 ID=LTnewLM_130007200.1:CDS:1;Parent=LTnewLM_130007200.1 ### LTnewLM_13 . polypeptide 72902 74161 . - . ID=LTnewLM_130007200.1:pep;Derives_from=LTnewLM_130007200.1;orthologous_to=LmjF.13.0230_mRNA;ortholog_cluster=OG0000941;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . polypeptide 75865 76788 . - . ID=LTnewLM_130007300.1:pep;Derives_from=LTnewLM_130007300.1;orthologous_to=LmjF.13.0240.2_mRNA;ortholog_cluster=OG0007442;product=term%3DDomain of unknown function (DUF4200)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13863 LTnewLM_13 Pfam protein_match 76408 76746 . - . Parent=LTnewLM_130007300.1:pep;Name=PF13863;signature_desc=Domain of unknown function (DUF4200) ### LTnewLM_13 . polypeptide 75865 77077 . - . ID=LTnewLM_130007300.2:pep;Derives_from=LTnewLM_130007300.2;product=term%3Dhypothetical protein ### LTnewLM_13 . pseudogene 75865 78618 . - . ID=LTnewLM_130007300:pseudogene;coverage=0.985;sequence_ID=0.921;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.0240_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 75865 76894 . - . ID=LTnewLM_130007300.1;Parent=LTnewLM_130007300:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 75865 76788 . - . ID=LTnewLM_130007300.1:pseudogenic_exon:1;Parent=LTnewLM_130007300.1;extra_copy_number=0 LTnewLM_13 . pseudogenic_transcript 75865 78618 . - . ID=LTnewLM_130007300.2;Parent=LTnewLM_130007300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 75865 77077 . - . ID=LTnewLM_130007300.2:pseudogenic_exon:1;Parent=LTnewLM_130007300.2;extra_copy_number=0 ### LTnewLM_13 AUGUSTUS gene 79247 80848 1 - . ID=LTnewLM_130007400 LTnewLM_13 AUGUSTUS mRNA 79247 80848 1 - . ID=LTnewLM_130007400.1;Parent=LTnewLM_130007400 LTnewLM_13 AUGUSTUS CDS 79247 80848 1 - 0 ID=LTnewLM_130007400.1:CDS:1;Parent=LTnewLM_130007400.1 ### LTnewLM_13 . polypeptide 79247 80848 . - . ID=LTnewLM_130007400.1:pep;Derives_from=LTnewLM_130007400.1;orthologous_to=LmjF.13.0250_mRNA;ortholog_cluster=OG0000942;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 81345 82127 1 - . ID=LTnewLM_130007500 LTnewLM_13 AUGUSTUS mRNA 81345 82127 1 - . ID=LTnewLM_130007500.1;Parent=LTnewLM_130007500 LTnewLM_13 AUGUSTUS CDS 81345 82127 1 - 0 ID=LTnewLM_130007500.1:CDS:1;Parent=LTnewLM_130007500.1 ### LTnewLM_13 . polypeptide 81345 82127 . - . ID=LTnewLM_130007500.1:pep;Derives_from=LTnewLM_130007500.1;orthologous_to=LmjF.13.0260_mRNA;ortholog_cluster=OG0000943;product=term%3DAcetyltransferase (GNAT) family/Acetyltransferase (GNAT) domain/FR47-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583|Pfam:PF13673|Pfam:PF08445;Ontology_term=GO:0016747,GO:0008080 LTnewLM_13 Pfam protein_match 81723 81992 . - . Parent=LTnewLM_130007500.1:pep;Name=PF13673;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_13 Pfam protein_match 81735 81926 . - . Parent=LTnewLM_130007500.1:pep;Name=PF08445;signature_desc=FR47-like protein;Ontology_term=GO:0016747 LTnewLM_13 Pfam protein_match 81744 82046 . - . Parent=LTnewLM_130007500.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_13 Liftoff gene 84945 90563 . - . ID=LTnewLM_130007600;coverage=0.985;sequence_ID=0.939;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.0270_0 LTnewLM_13 Liftoff mRNA 84945 90563 . - . ID=LTnewLM_130007600.1;Parent=LTnewLM_130007600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 84945 90563 . - 0 ID=LTnewLM_130007600.1:CDS:1;Parent=LTnewLM_130007600.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 84945 90563 . - . ID=LTnewLM_130007600.1:pep;Derives_from=LTnewLM_130007600.1;orthologous_to=LmjF.13.0270_mRNA;ortholog_cluster=OG0000944;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 91384 92739 1 - . ID=LTnewLM_130007700 LTnewLM_13 AUGUSTUS mRNA 91384 92739 1 - . ID=LTnewLM_130007700.1;Parent=LTnewLM_130007700 LTnewLM_13 AUGUSTUS CDS 91384 92739 1 - 0 ID=LTnewLM_130007700.1:CDS:1;Parent=LTnewLM_130007700.1 ### LTnewLM_13 . polypeptide 91384 92739 . - . ID=LTnewLM_130007700.1:pep;Derives_from=LTnewLM_130007700.1;orthologous_to=LTnewLM_130007800.1,LTnewLM_130007800.2,LTnewLM_130007900.1,LTnewLM_130008000.1,LTnewLM_130008100.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 91567 91953 . - . Parent=LTnewLM_130007700.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 92107 92733 . - . Parent=LTnewLM_130007700.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 . polypeptide 93603 94058 . - . ID=LTnewLM_130007800.1:pep;Derives_from=LTnewLM_130007800.1;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.2,LTnewLM_130007900.1,LTnewLM_130008000.1,LTnewLM_130008100.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03953 LTnewLM_13 Pfam protein_match 93786 94058 . - . Parent=LTnewLM_130007800.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_13 AUGUSTUS gene 93603 94958 2 - . ID=LTnewLM_130007800 LTnewLM_13 AUGUSTUS mRNA 93603 94058 1 - . ID=LTnewLM_130007800.1;Parent=LTnewLM_130007800 LTnewLM_13 AUGUSTUS CDS 93603 94058 1 - 0 ID=LTnewLM_130007800.1:CDS:1;Parent=LTnewLM_130007800.1 LTnewLM_13 AUGUSTUS mRNA 93603 94958 1 - . ID=LTnewLM_130007800.2;Parent=LTnewLM_130007800 LTnewLM_13 AUGUSTUS CDS 93603 94958 1 - 0 ID=LTnewLM_130007800.2:CDS:1;Parent=LTnewLM_130007800.2 ### LTnewLM_13 . polypeptide 93603 94958 . - . ID=LTnewLM_130007800.2:pep;Derives_from=LTnewLM_130007800.2;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.1,LTnewLM_130007900.1,LTnewLM_130008000.1,LTnewLM_130008100.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 93786 94172 . - . Parent=LTnewLM_130007800.2:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 94326 94952 . - . Parent=LTnewLM_130007800.2:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 AUGUSTUS gene 95818 97173 1 - . ID=LTnewLM_130007900 LTnewLM_13 AUGUSTUS mRNA 95818 97173 1 - . ID=LTnewLM_130007900.1;Parent=LTnewLM_130007900 LTnewLM_13 AUGUSTUS CDS 95818 97173 1 - 0 ID=LTnewLM_130007900.1:CDS:1;Parent=LTnewLM_130007900.1 ### LTnewLM_13 . polypeptide 95818 97173 . - . ID=LTnewLM_130007900.1:pep;Derives_from=LTnewLM_130007900.1;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.1,LTnewLM_130007800.2,LTnewLM_130008000.1,LTnewLM_130008100.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 96001 96387 . - . Parent=LTnewLM_130007900.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 96541 97167 . - . Parent=LTnewLM_130007900.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 AUGUSTUS gene 98033 99388 1 - . ID=LTnewLM_130008000 LTnewLM_13 AUGUSTUS mRNA 98033 99388 1 - . ID=LTnewLM_130008000.1;Parent=LTnewLM_130008000 LTnewLM_13 AUGUSTUS CDS 98033 99388 1 - 0 ID=LTnewLM_130008000.1:CDS:1;Parent=LTnewLM_130008000.1 ### LTnewLM_13 . polypeptide 98033 99388 . - . ID=LTnewLM_130008000.1:pep;Derives_from=LTnewLM_130008000.1;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.1,LTnewLM_130007800.2,LTnewLM_130007900.1,LTnewLM_130008100.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 98216 98602 . - . Parent=LTnewLM_130008000.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 98756 99382 . - . Parent=LTnewLM_130008000.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 AUGUSTUS gene 100250 101605 1 - . ID=LTnewLM_130008100 LTnewLM_13 AUGUSTUS mRNA 100250 101605 1 - . ID=LTnewLM_130008100.1;Parent=LTnewLM_130008100 LTnewLM_13 AUGUSTUS CDS 100250 101605 1 - 0 ID=LTnewLM_130008100.1:CDS:1;Parent=LTnewLM_130008100.1 ### LTnewLM_13 . polypeptide 100250 101605 . - . ID=LTnewLM_130008100.1:pep;Derives_from=LTnewLM_130008100.1;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.1,LTnewLM_130007800.2,LTnewLM_130007900.1,LTnewLM_130008000.1,LTnewLM_130008200.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 100433 100819 . - . Parent=LTnewLM_130008100.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 100973 101599 . - . Parent=LTnewLM_130008100.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 Liftoff gene 102468 103823 . - . ID=LTnewLM_130008200;coverage=1.0;sequence_ID=0.994;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.0390_0 LTnewLM_13 Liftoff mRNA 102468 103823 . - . ID=LTnewLM_130008200.1;Parent=LTnewLM_130008200;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 102468 103823 . - 0 ID=LTnewLM_130008200.1:CDS:1;Parent=LTnewLM_130008200.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 102468 103823 . - . ID=LTnewLM_130008200.1:pep;Derives_from=LTnewLM_130008200.1;orthologous_to=LTnewLM_130007700.1,LTnewLM_130007800.1,LTnewLM_130007800.2,LTnewLM_130007900.1,LTnewLM_130008000.1,LTnewLM_130008100.1,LmjF.13.0280_mRNA,LmjF.13.0290_mRNA,LmjF.13.0300_mRNA,LmjF.13.0310_mRNA,LmjF.13.0320_mRNA,LmjF.13.0330_mRNA,LmjF.13.0340_mRNA,LmjF.13.0350_mRNA,LmjF.13.0360_mRNA,LmjF.13.0370_mRNA,LmjF.13.0380_mRNA,LmjF.13.0390_mRNA;ortholog_cluster=OG0000004;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_13 Pfam protein_match 102651 103037 . - . Parent=LTnewLM_130008200.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain LTnewLM_13 Pfam protein_match 103191 103817 . - . Parent=LTnewLM_130008200.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_13 Liftoff gene 104436 110529 . - . ID=LTnewLM_130008300;coverage=0.999;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.0400_0 LTnewLM_13 Liftoff mRNA 104436 110529 . - . ID=LTnewLM_130008300.1;Parent=LTnewLM_130008300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 104436 110529 . - 0 ID=LTnewLM_130008300.1:CDS:1;Parent=LTnewLM_130008300.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 104436 110529 . - . ID=LTnewLM_130008300.1:pep;Derives_from=LTnewLM_130008300.1;orthologous_to=LmjF.13.0400_mRNA;ortholog_cluster=OG0000945;product=term%3DSister chromatid cohesion C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12830 LTnewLM_13 Pfam protein_match 105175 105852 . - . Parent=LTnewLM_130008300.1:pep;Name=PF12830;signature_desc=Sister chromatid cohesion C-terminus ### LTnewLM_13 AUGUSTUS gene 111535 114828 1 - . ID=LTnewLM_130008400 LTnewLM_13 AUGUSTUS mRNA 111535 114828 1 - . ID=LTnewLM_130008400.1;Parent=LTnewLM_130008400 LTnewLM_13 AUGUSTUS CDS 111535 114828 1 - 0 ID=LTnewLM_130008400.1:CDS:1;Parent=LTnewLM_130008400.1 ### LTnewLM_13 . polypeptide 111535 114828 . - . ID=LTnewLM_130008400.1:pep;Derives_from=LTnewLM_130008400.1;orthologous_to=LmjF.13.0410_mRNA;ortholog_cluster=OG0000946;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 115491 117500 1 - . ID=LTnewLM_130008500 LTnewLM_13 AUGUSTUS mRNA 115491 117500 1 - . ID=LTnewLM_130008500.1;Parent=LTnewLM_130008500 LTnewLM_13 AUGUSTUS CDS 115491 117500 1 - 0 ID=LTnewLM_130008500.1:CDS:1;Parent=LTnewLM_130008500.1 ### LTnewLM_13 . polypeptide 115491 117500 . - . ID=LTnewLM_130008500.1:pep;Derives_from=LTnewLM_130008500.1;orthologous_to=LmjF.13.0420_mRNA;ortholog_cluster=OG0000947;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_13 Pfam protein_match 115929 117233 . - . Parent=LTnewLM_130008500.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_13 AUGUSTUS gene 118519 120306 1 - . ID=LTnewLM_130008600 LTnewLM_13 AUGUSTUS mRNA 118519 120306 1 - . ID=LTnewLM_130008600.1;Parent=LTnewLM_130008600 LTnewLM_13 AUGUSTUS CDS 118519 120306 1 - 0 ID=LTnewLM_130008600.1:CDS:1;Parent=LTnewLM_130008600.1 ### LTnewLM_13 . polypeptide 118519 120306 . - . ID=LTnewLM_130008600.1:pep;Derives_from=LTnewLM_130008600.1;orthologous_to=LmjF.13.0430_mRNA;ortholog_cluster=OG0000948;product=term%3DRadial spokehead-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04712 LTnewLM_13 Pfam protein_match 118606 118977 . - . Parent=LTnewLM_130008600.1:pep;Name=PF04712;signature_desc=Radial spokehead-like protein LTnewLM_13 Pfam protein_match 119026 120255 . - . Parent=LTnewLM_130008600.1:pep;Name=PF04712;signature_desc=Radial spokehead-like protein ### LTnewLM_13 AUGUSTUS gene 122397 125669 1 - . ID=LTnewLM_130008700 LTnewLM_13 AUGUSTUS mRNA 122397 125669 1 - . ID=LTnewLM_130008700.1;Parent=LTnewLM_130008700 LTnewLM_13 AUGUSTUS CDS 122397 125669 1 - 0 ID=LTnewLM_130008700.1:CDS:1;Parent=LTnewLM_130008700.1 ### LTnewLM_13 . polypeptide 122397 125669 . - . ID=LTnewLM_130008700.1:pep;Derives_from=LTnewLM_130008700.1;orthologous_to=LmjF.13.0440_mRNA;ortholog_cluster=OG0000949;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain/Armadillo/beta-catenin-like repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109|Pfam:PF00514;Ontology_term=GO:0004672,GO:0005515,GO:0006468,GO:0005524 LTnewLM_13 Pfam protein_match 122670 122750 . - . Parent=LTnewLM_130008700.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 124887 125648 . - . Parent=LTnewLM_130008700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_13 Pfam protein_match 124905 125645 . - . Parent=LTnewLM_130008700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_13 Pfam protein_match 125199 125441 . - . Parent=LTnewLM_130008700.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_13 AUGUSTUS gene 127556 127921 1 - . ID=LTnewLM_130008800 LTnewLM_13 AUGUSTUS mRNA 127556 127921 1 - . ID=LTnewLM_130008800.1;Parent=LTnewLM_130008800 LTnewLM_13 AUGUSTUS CDS 127556 127921 1 - 0 ID=LTnewLM_130008800.1:CDS:1;Parent=LTnewLM_130008800.1 ### LTnewLM_13 . polypeptide 127556 127921 . - . ID=LTnewLM_130008800.1:pep;Derives_from=LTnewLM_130008800.1;orthologous_to=LmjF.13.0450_mRNA;ortholog_cluster=OG0000950;product=term%3DAlba%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01918;Ontology_term=GO:0003676 LTnewLM_13 Pfam protein_match 127715 127894 . - . Parent=LTnewLM_130008800.1:pep;Name=PF01918;signature_desc=Alba;Ontology_term=GO:0003676 ### LTnewLM_13 AUGUSTUS gene 133656 135149 1 + . ID=LTnewLM_130008900 LTnewLM_13 AUGUSTUS mRNA 133656 135149 1 + . ID=LTnewLM_130008900.1;Parent=LTnewLM_130008900 LTnewLM_13 AUGUSTUS CDS 133656 135149 1 + 0 ID=LTnewLM_130008900.1:CDS:1;Parent=LTnewLM_130008900.1 ### LTnewLM_13 . polypeptide 133656 135149 . + . ID=LTnewLM_130008900.1:pep;Derives_from=LTnewLM_130008900.1;orthologous_to=LmjF.13.0460_mRNA;ortholog_cluster=OG0000951;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 133671 133973 . + . Parent=LTnewLM_130008900.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_13 AUGUSTUS gene 136354 138219 0.97 + . ID=LTnewLM_130009000 LTnewLM_13 AUGUSTUS mRNA 136354 138219 0.97 + . ID=LTnewLM_130009000.1;Parent=LTnewLM_130009000 LTnewLM_13 AUGUSTUS CDS 136354 137019 0.98 + 0 ID=LTnewLM_130009000.1:CDS:1;Parent=LTnewLM_130009000.1 LTnewLM_13 AUGUSTUS CDS 137416 138219 0.97 + 0 ID=LTnewLM_130009000.1:CDS:2;Parent=LTnewLM_130009000.1 ### LTnewLM_13 . polypeptide 136354 138219 . + . ID=LTnewLM_130009000.1:pep;Derives_from=LTnewLM_130009000.1;orthologous_to=LmjF.13.0470_mRNA;ortholog_cluster=OG0000952;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 138935 141217 1 + . ID=LTnewLM_130009100 LTnewLM_13 AUGUSTUS mRNA 138935 141217 1 + . ID=LTnewLM_130009100.1;Parent=LTnewLM_130009100 LTnewLM_13 AUGUSTUS CDS 138935 141217 1 + 0 ID=LTnewLM_130009100.1:CDS:1;Parent=LTnewLM_130009100.1 ### LTnewLM_13 . polypeptide 138935 141217 . + . ID=LTnewLM_130009100.1:pep;Derives_from=LTnewLM_130009100.1;orthologous_to=LmjF.13.0480_mRNA;ortholog_cluster=OG0000953;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 142606 144144 1 + . ID=LTnewLM_130009200 LTnewLM_13 AUGUSTUS mRNA 142606 144144 1 + . ID=LTnewLM_130009200.1;Parent=LTnewLM_130009200 LTnewLM_13 AUGUSTUS CDS 142606 144144 1 + 0 ID=LTnewLM_130009200.1:CDS:1;Parent=LTnewLM_130009200.1 ### LTnewLM_13 . polypeptide 142606 144144 . + . ID=LTnewLM_130009200.1:pep;Derives_from=LTnewLM_130009200.1;orthologous_to=LmjF.13.0490_mRNA;ortholog_cluster=OG0000954;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_13 Pfam protein_match 142816 143112 . + . Parent=LTnewLM_130009200.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_13 AUGUSTUS gene 146103 152606 1 + . ID=LTnewLM_130009300 LTnewLM_13 AUGUSTUS mRNA 146103 152606 1 + . ID=LTnewLM_130009300.1;Parent=LTnewLM_130009300 LTnewLM_13 AUGUSTUS CDS 146103 152606 1 + 0 ID=LTnewLM_130009300.1:CDS:1;Parent=LTnewLM_130009300.1 ### LTnewLM_13 . polypeptide 146103 152606 . + . ID=LTnewLM_130009300.1:pep;Derives_from=LTnewLM_130009300.1;orthologous_to=LmjF.13.0500_mRNA;ortholog_cluster=OG0000955;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Sec63 Brl domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF02889|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_13 Pfam protein_match 147456 147980 . + . Parent=LTnewLM_130009300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_13 Pfam protein_match 147489 147971 . + . Parent=LTnewLM_130009300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_13 Pfam protein_match 148956 149933 . + . Parent=LTnewLM_130009300.1:pep;Name=PF02889;signature_desc=Sec63 Brl domain LTnewLM_13 Pfam protein_match 150063 150545 . + . Parent=LTnewLM_130009300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_13 Pfam protein_match 150096 150455 . + . Parent=LTnewLM_130009300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_13 Pfam protein_match 150891 151151 . + . Parent=LTnewLM_130009300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_13 Pfam protein_match 151533 152546 . + . Parent=LTnewLM_130009300.1:pep;Name=PF02889;signature_desc=Sec63 Brl domain ### LTnewLM_13 AUGUSTUS gene 153270 154169 1 + . ID=LTnewLM_130009400 LTnewLM_13 AUGUSTUS mRNA 153270 154169 1 + . ID=LTnewLM_130009400.1;Parent=LTnewLM_130009400 LTnewLM_13 AUGUSTUS CDS 153270 154169 1 + 0 ID=LTnewLM_130009400.1:CDS:1;Parent=LTnewLM_130009400.1 ### LTnewLM_13 . polypeptide 153270 154169 . + . ID=LTnewLM_130009400.1:pep;Derives_from=LTnewLM_130009400.1;orthologous_to=LmjF.13.0510_mRNA;ortholog_cluster=OG0000956;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 155066 155902 1 + . ID=LTnewLM_130009500 LTnewLM_13 AUGUSTUS mRNA 155066 155902 1 + . ID=LTnewLM_130009500.1;Parent=LTnewLM_130009500 LTnewLM_13 AUGUSTUS CDS 155066 155902 1 + 0 ID=LTnewLM_130009500.1:CDS:1;Parent=LTnewLM_130009500.1 ### LTnewLM_13 . polypeptide 155066 155902 . + . ID=LTnewLM_130009500.1:pep;Derives_from=LTnewLM_130009500.1;orthologous_to=LmjF.13.0520_mRNA;ortholog_cluster=OG0000957;product=term%3DCoiled-coil domain-containing protein 124 /Oxs1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06244 LTnewLM_13 Pfam protein_match 155534 155770 . + . Parent=LTnewLM_130009500.1:pep;Name=PF06244;signature_desc=Coiled-coil domain-containing protein 124 /Oxs1 ### LTnewLM_13 AUGUSTUS gene 158505 162212 1 + . ID=LTnewLM_130009600 LTnewLM_13 AUGUSTUS mRNA 158505 162212 1 + . ID=LTnewLM_130009600.1;Parent=LTnewLM_130009600 LTnewLM_13 AUGUSTUS CDS 158505 162212 1 + 0 ID=LTnewLM_130009600.1:CDS:1;Parent=LTnewLM_130009600.1 ### LTnewLM_13 . polypeptide 158505 162212 . + . ID=LTnewLM_130009600.1:pep;Derives_from=LTnewLM_130009600.1;orthologous_to=LmjF.13.0530_mRNA;ortholog_cluster=OG0000958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 163063 163659 1 + . ID=LTnewLM_130009700 LTnewLM_13 AUGUSTUS mRNA 163063 163659 1 + . ID=LTnewLM_130009700.1;Parent=LTnewLM_130009700 LTnewLM_13 AUGUSTUS CDS 163063 163659 1 + 0 ID=LTnewLM_130009700.1:CDS:1;Parent=LTnewLM_130009700.1 ### LTnewLM_13 . polypeptide 163063 163659 . + . ID=LTnewLM_130009700.1:pep;Derives_from=LTnewLM_130009700.1;orthologous_to=LmjF.13.0540_mRNA;ortholog_cluster=OG0000959;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 164526 166529 1 + . ID=LTnewLM_130009800 LTnewLM_13 AUGUSTUS mRNA 164526 166529 1 + . ID=LTnewLM_130009800.1;Parent=LTnewLM_130009800 LTnewLM_13 AUGUSTUS CDS 164526 166529 1 + 0 ID=LTnewLM_130009800.1:CDS:1;Parent=LTnewLM_130009800.1 ### LTnewLM_13 . polypeptide 164526 166529 . + . ID=LTnewLM_130009800.1:pep;Derives_from=LTnewLM_130009800.1;orthologous_to=LmjF.13.0550_mRNA;ortholog_cluster=OG0000960;product=term%3DUncharacterized ACR%2C COG1678%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02622 LTnewLM_13 Pfam protein_match 165627 166067 . + . Parent=LTnewLM_130009800.1:pep;Name=PF02622;signature_desc=Uncharacterized ACR%2C COG1678 ### LTnewLM_13 AUGUSTUS gene 167683 168279 1 + . ID=LTnewLM_130009900 LTnewLM_13 AUGUSTUS mRNA 167683 168279 1 + . ID=LTnewLM_130009900.1;Parent=LTnewLM_130009900 LTnewLM_13 AUGUSTUS CDS 167683 168279 1 + 0 ID=LTnewLM_130009900.1:CDS:1;Parent=LTnewLM_130009900.1 ### LTnewLM_13 . polypeptide 167683 168279 . + . ID=LTnewLM_130009900.1:pep;Derives_from=LTnewLM_130009900.1;orthologous_to=LTnewLM_360056500.1,LmjF.13.0560_mRNA,LmjF.36.4510_mRNA;ortholog_cluster=OG0000115;product=term%3DRibosomal protein 60S L18 and 50S L18e/Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17135|Pfam:PF00828 LTnewLM_13 Pfam protein_match 167686 168252 . + . Parent=LTnewLM_130009900.1:pep;Name=PF17135;signature_desc=Ribosomal protein 60S L18 and 50S L18e LTnewLM_13 Pfam protein_match 167770 168060 . + . Parent=LTnewLM_130009900.1:pep;Name=PF00828;signature_desc=Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A ### LTnewLM_13 AUGUSTUS gene 169510 169935 1 + . ID=LTnewLM_130010000 LTnewLM_13 AUGUSTUS mRNA 169510 169935 1 + . ID=LTnewLM_130010000.1;Parent=LTnewLM_130010000 LTnewLM_13 AUGUSTUS CDS 169510 169935 1 + 0 ID=LTnewLM_130010000.1:CDS:1;Parent=LTnewLM_130010000.1 ### LTnewLM_13 . polypeptide 169510 169935 . + . ID=LTnewLM_130010000.1:pep;Derives_from=LTnewLM_130010000.1;orthologous_to=LmjF.13.0570_mRNA;ortholog_cluster=OG0000961;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_13 Pfam protein_match 169594 169872 . + . Parent=LTnewLM_130010000.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_13 AUGUSTUS gene 172533 178103 1 + . ID=LTnewLM_130010100 LTnewLM_13 AUGUSTUS mRNA 172533 178103 1 + . ID=LTnewLM_130010100.1;Parent=LTnewLM_130010100 LTnewLM_13 AUGUSTUS CDS 172533 178103 1 + 0 ID=LTnewLM_130010100.1:CDS:1;Parent=LTnewLM_130010100.1 ### LTnewLM_13 . polypeptide 172533 178103 . + . ID=LTnewLM_130010100.1:pep;Derives_from=LTnewLM_130010100.1;orthologous_to=LmjF.13.0580_mRNA;ortholog_cluster=OG0000962;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 179139 180116 1 + . ID=LTnewLM_130010200 LTnewLM_13 AUGUSTUS mRNA 179139 180116 1 + . ID=LTnewLM_130010200.1;Parent=LTnewLM_130010200 LTnewLM_13 AUGUSTUS CDS 179139 180116 1 + 0 ID=LTnewLM_130010200.1:CDS:1;Parent=LTnewLM_130010200.1 ### LTnewLM_13 . polypeptide 179139 180116 . + . ID=LTnewLM_130010200.1:pep;Derives_from=LTnewLM_130010200.1;orthologous_to=LmjF.13.0590_mRNA;ortholog_cluster=OG0000963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 180831 181796 1 + . ID=LTnewLM_130010300 LTnewLM_13 AUGUSTUS mRNA 180831 181796 1 + . ID=LTnewLM_130010300.1;Parent=LTnewLM_130010300 LTnewLM_13 AUGUSTUS CDS 180831 181796 1 + 0 ID=LTnewLM_130010300.1:CDS:1;Parent=LTnewLM_130010300.1 ### LTnewLM_13 . polypeptide 180831 181796 . + . ID=LTnewLM_130010300.1:pep;Derives_from=LTnewLM_130010300.1;orthologous_to=LmjF.13.0600_mRNA;ortholog_cluster=OG0000964;product=term%3DMitochondrial calcium uniporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04678 LTnewLM_13 Pfam protein_match 181368 181727 . + . Parent=LTnewLM_130010300.1:pep;Name=PF04678;signature_desc=Mitochondrial calcium uniporter ### LTnewLM_13 AUGUSTUS gene 182816 183640 1 + . ID=LTnewLM_130010400 LTnewLM_13 AUGUSTUS mRNA 182816 183640 1 + . ID=LTnewLM_130010400.1;Parent=LTnewLM_130010400 LTnewLM_13 AUGUSTUS CDS 182816 183640 1 + 0 ID=LTnewLM_130010400.1:CDS:1;Parent=LTnewLM_130010400.1 ### LTnewLM_13 . polypeptide 182816 183640 . + . ID=LTnewLM_130010400.1:pep;Derives_from=LTnewLM_130010400.1;orthologous_to=LmjF.13.0610_mRNA;ortholog_cluster=OG0000965;product=term%3DAcetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583;Ontology_term=GO:0008080 LTnewLM_13 Pfam protein_match 183323 183553 . + . Parent=LTnewLM_130010400.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_13 AUGUSTUS gene 185785 187062 1 + . ID=LTnewLM_130010500 LTnewLM_13 AUGUSTUS mRNA 185785 187062 1 + . ID=LTnewLM_130010500.1;Parent=LTnewLM_130010500 LTnewLM_13 AUGUSTUS CDS 185785 187062 1 + 0 ID=LTnewLM_130010500.1:CDS:1;Parent=LTnewLM_130010500.1 ### LTnewLM_13 . polypeptide 185785 187062 . + . ID=LTnewLM_130010500.1:pep;Derives_from=LTnewLM_130010500.1;orthologous_to=LmjF.13.0620_mRNA;ortholog_cluster=OG0000966;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 188551 189459 1 + . ID=LTnewLM_130010600 LTnewLM_13 AUGUSTUS mRNA 188551 189459 1 + . ID=LTnewLM_130010600.1;Parent=LTnewLM_130010600 LTnewLM_13 AUGUSTUS CDS 188551 189459 1 + 0 ID=LTnewLM_130010600.1:CDS:1;Parent=LTnewLM_130010600.1 ### LTnewLM_13 . polypeptide 188551 189459 . + . ID=LTnewLM_130010600.1:pep;Derives_from=LTnewLM_130010600.1;orthologous_to=LmjF.13.0630_mRNA;ortholog_cluster=OG0000967;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 189935 193939 1 + . ID=LTnewLM_130010700 LTnewLM_13 AUGUSTUS mRNA 189935 193939 1 + . ID=LTnewLM_130010700.1;Parent=LTnewLM_130010700 LTnewLM_13 AUGUSTUS CDS 189935 193939 1 + 0 ID=LTnewLM_130010700.1:CDS:1;Parent=LTnewLM_130010700.1 ### LTnewLM_13 . polypeptide 189935 193939 . + . ID=LTnewLM_130010700.1:pep;Derives_from=LTnewLM_130010700.1;orthologous_to=LmjF.13.0640_mRNA;ortholog_cluster=OG0000968;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 194959 196782 1 + . ID=LTnewLM_130010800 LTnewLM_13 AUGUSTUS mRNA 194959 196782 1 + . ID=LTnewLM_130010800.1;Parent=LTnewLM_130010800 LTnewLM_13 AUGUSTUS CDS 194959 196782 1 + 0 ID=LTnewLM_130010800.1:CDS:1;Parent=LTnewLM_130010800.1 ### LTnewLM_13 . polypeptide 194959 196782 . + . ID=LTnewLM_130010800.1:pep;Derives_from=LTnewLM_130010800.1;orthologous_to=LmjF.13.0650_mRNA;ortholog_cluster=OG0000969;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_13 Pfam protein_match 195817 196161 . + . Parent=LTnewLM_130010800.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_13 AUGUSTUS gene 198706 200820 1 + . ID=LTnewLM_130010900 LTnewLM_13 AUGUSTUS mRNA 198706 200820 1 + . ID=LTnewLM_130010900.1;Parent=LTnewLM_130010900 LTnewLM_13 AUGUSTUS CDS 198706 200820 1 + 0 ID=LTnewLM_130010900.1:CDS:1;Parent=LTnewLM_130010900.1 ### LTnewLM_13 . polypeptide 198706 200820 . + . ID=LTnewLM_130010900.1:pep;Derives_from=LTnewLM_130010900.1;orthologous_to=LmjF.13.0660_mRNA;ortholog_cluster=OG0000970;product=term%3DU-box domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04564;Ontology_term=GO:0004842,GO:0016567 LTnewLM_13 Pfam protein_match 200590 200790 . + . Parent=LTnewLM_130010900.1:pep;Name=PF04564;signature_desc=U-box domain;Ontology_term=GO:0004842,GO:0016567 ### LTnewLM_13 . pseudogene 202731 204076 . + . ID=LTnewLM_130011000:pseudogene;coverage=0.865;sequence_ID=0.814;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.0670_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 202731 204076 . + . ID=LTnewLM_130011000.1;Parent=LTnewLM_130011000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 202731 204076 . + . ID=LTnewLM_130011000.1:pseudogenic_exon:1;Parent=LTnewLM_130011000.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 202731 204076 . + . ID=LTnewLM_130011000.1:pep;Derives_from=LTnewLM_130011000.1;orthologous_to=LmjF.13.0670_mRNA;ortholog_cluster=OG0007443;product=term%3DLegume-like lectin family/Bacterial lectin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03388|Pfam:PF18483;Ontology_term=GO:0016020 LTnewLM_13 Pfam protein_match 202911 203564 . + . Parent=LTnewLM_130011000.1:pep;Name=PF03388;signature_desc=Legume-like lectin family;Ontology_term=GO:0016020 LTnewLM_13 Pfam protein_match 202980 203561 . + . Parent=LTnewLM_130011000.1:pep;Name=PF18483;signature_desc=Bacterial lectin ### LTnewLM_13 AUGUSTUS gene 204716 206440 1 + . ID=LTnewLM_130011100 LTnewLM_13 AUGUSTUS mRNA 204716 206440 1 + . ID=LTnewLM_130011100.1;Parent=LTnewLM_130011100 LTnewLM_13 AUGUSTUS CDS 204716 206440 1 + 0 ID=LTnewLM_130011100.1:CDS:1;Parent=LTnewLM_130011100.1 ### LTnewLM_13 . polypeptide 204716 206440 . + . ID=LTnewLM_130011100.1:pep;Derives_from=LTnewLM_130011100.1;orthologous_to=LmjF.13.0680_mRNA;ortholog_cluster=OG0000971;product=term%3DMetallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00557 LTnewLM_13 Pfam protein_match 205196 205750 . + . Parent=LTnewLM_130011100.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_13 AUGUSTUS gene 208524 211664 1 + . ID=LTnewLM_130011200 LTnewLM_13 AUGUSTUS mRNA 208524 211664 1 + . ID=LTnewLM_130011200.1;Parent=LTnewLM_130011200 LTnewLM_13 AUGUSTUS CDS 208524 211664 1 + 0 ID=LTnewLM_130011200.1:CDS:1;Parent=LTnewLM_130011200.1 ### LTnewLM_13 . polypeptide 208524 211664 . + . ID=LTnewLM_130011200.1:pep;Derives_from=LTnewLM_130011200.1;orthologous_to=LmjF.13.0690_mRNA;ortholog_cluster=OG0000972;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_13 Pfam protein_match 211323 211571 . + . Parent=LTnewLM_130011200.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_13 . pseudogene 214610 218917 . + . ID=LTnewLM_130011300:pseudogene;coverage=0.999;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.0700_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 214610 218917 . + . ID=LTnewLM_130011300.1;Parent=LTnewLM_130011300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 214610 218917 . + . ID=LTnewLM_130011300.1:pseudogenic_exon:1;Parent=LTnewLM_130011300.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 214610 218917 . + . ID=LTnewLM_130011300.1:pep;Derives_from=LTnewLM_130011300.1;orthologous_to=LmjF.13.0700_mRNA;ortholog_cluster=OG0007444;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 220226 221554 1 - . ID=LTnewLM_130011400 LTnewLM_13 AUGUSTUS mRNA 220226 221554 1 - . ID=LTnewLM_130011400.1;Parent=LTnewLM_130011400 LTnewLM_13 AUGUSTUS CDS 220226 221554 1 - 0 ID=LTnewLM_130011400.1:CDS:1;Parent=LTnewLM_130011400.1 ### LTnewLM_13 . polypeptide 220226 221554 . - . ID=LTnewLM_130011400.1:pep;Derives_from=LTnewLM_130011400.1;orthologous_to=LmjF.13.0710_mRNA;ortholog_cluster=OG0000973;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_13 Pfam protein_match 221237 221500 . - . Parent=LTnewLM_130011400.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_13 . polypeptide 222570 223598 . - . ID=LTnewLM_130011500.1:pep;Derives_from=LTnewLM_130011500.1;orthologous_to=LTnewLM_130011500.2,LmjF.13.0720.1_mRNA,LmjF.13.0720.2_mRNA;ortholog_cluster=OG0000116;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_13 Pfam protein_match 222585 223016 . - . Parent=LTnewLM_130011500.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase LTnewLM_13 Pfam protein_match 222750 223127 . - . Parent=LTnewLM_130011500.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_13 Pfam protein_match 223305 223487 . - . Parent=LTnewLM_130011500.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_13 . polypeptide 222570 223607 . - . ID=LTnewLM_130011500.2:pep;Derives_from=LTnewLM_130011500.2;orthologous_to=LTnewLM_130011500.1,LmjF.13.0720.1_mRNA,LmjF.13.0720.2_mRNA;ortholog_cluster=OG0000116;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_13 Pfam protein_match 222585 223016 . - . Parent=LTnewLM_130011500.2:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase LTnewLM_13 Pfam protein_match 222750 223127 . - . Parent=LTnewLM_130011500.2:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_13 Pfam protein_match 223305 223487 . - . Parent=LTnewLM_130011500.2:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_13 Liftoff gene 222570 223621 . - . ID=LTnewLM_130011500;coverage=1.0;sequence_ID=0.961;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.0720_0 LTnewLM_13 Liftoff mRNA 222570 223601 . - . ID=LTnewLM_130011500.1;Parent=LTnewLM_130011500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 222570 223598 . - 0 ID=LTnewLM_130011500.1:CDS:1;Parent=LTnewLM_130011500.1;extra_copy_number=0 LTnewLM_13 Liftoff five_prime_UTR 223599 223601 . - . ID=LTnewLM_130011500:five_prime_UTR;Parent=LTnewLM_130011500.1;extra_copy_number=0 LTnewLM_13 Liftoff mRNA 222570 223621 . - . ID=LTnewLM_130011500.2;Parent=LTnewLM_130011500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 222570 223607 . - 0 ID=LTnewLM_130011500.2:CDS:1;Parent=LTnewLM_130011500.2;extra_copy_number=0 LTnewLM_13 Liftoff five_prime_UTR 223608 223621 . - . ID=LTnewLM_130011500:five_prime_UTR.1;Parent=LTnewLM_130011500.2;extra_copy_number=0 ### LTnewLM_13 AUGUSTUS gene 224550 227075 1 - . ID=LTnewLM_130011600 LTnewLM_13 AUGUSTUS mRNA 224550 227075 1 - . ID=LTnewLM_130011600.1;Parent=LTnewLM_130011600 LTnewLM_13 AUGUSTUS CDS 224550 227075 1 - 0 ID=LTnewLM_130011600.1:CDS:1;Parent=LTnewLM_130011600.1 ### LTnewLM_13 . polypeptide 224550 227075 . - . ID=LTnewLM_130011600.1:pep;Derives_from=LTnewLM_130011600.1;orthologous_to=LmjF.13.0730_mRNA;ortholog_cluster=OG0000974;product=term%3DUbiquitin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00240;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 226851 227030 . - . Parent=LTnewLM_130011600.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 ### LTnewLM_13 Liftoff gene 228143 231352 . - . ID=LTnewLM_130011700;coverage=0.995;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.0740_0 LTnewLM_13 Liftoff mRNA 228143 231352 . - . ID=LTnewLM_130011700.1;Parent=LTnewLM_130011700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 228143 231352 . - 0 ID=LTnewLM_130011700.1:CDS:1;Parent=LTnewLM_130011700.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 228143 231352 . - . ID=LTnewLM_130011700.1:pep;Derives_from=LTnewLM_130011700.1;orthologous_to=LmjF.13.0740_mRNA;ortholog_cluster=OG0000975;product=term%3DCalcium-activated chloride channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04547 LTnewLM_13 Pfam protein_match 228176 229792 . - . Parent=LTnewLM_130011700.1:pep;Name=PF04547;signature_desc=Calcium-activated chloride channel ### LTnewLM_13 AUGUSTUS gene 232801 233676 1 - . ID=LTnewLM_130011800 LTnewLM_13 AUGUSTUS mRNA 232801 233676 1 - . ID=LTnewLM_130011800.1;Parent=LTnewLM_130011800 LTnewLM_13 AUGUSTUS CDS 232801 233676 1 - 0 ID=LTnewLM_130011800.1:CDS:1;Parent=LTnewLM_130011800.1 ### LTnewLM_13 . polypeptide 232801 233676 . - . ID=LTnewLM_130011800.1:pep;Derives_from=LTnewLM_130011800.1;orthologous_to=LmjF.13.0750_mRNA;ortholog_cluster=OG0000976;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 234336 240515 1 - . ID=LTnewLM_130011900 LTnewLM_13 AUGUSTUS mRNA 234336 240515 1 - . ID=LTnewLM_130011900.1;Parent=LTnewLM_130011900 LTnewLM_13 AUGUSTUS CDS 234336 240515 1 - 0 ID=LTnewLM_130011900.1:CDS:1;Parent=LTnewLM_130011900.1 ### LTnewLM_13 . polypeptide 234336 240515 . - . ID=LTnewLM_130011900.1:pep;Derives_from=LTnewLM_130011900.1;orthologous_to=LmjF.13.0760_mRNA;ortholog_cluster=OG0000977;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 240192 240509 . - . Parent=LTnewLM_130011900.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_13 AUGUSTUS gene 241375 243030 1 - . ID=LTnewLM_130012000 LTnewLM_13 AUGUSTUS mRNA 241375 243030 1 - . ID=LTnewLM_130012000.1;Parent=LTnewLM_130012000 LTnewLM_13 AUGUSTUS CDS 241375 243030 1 - 0 ID=LTnewLM_130012000.1:CDS:1;Parent=LTnewLM_130012000.1 ### LTnewLM_13 . polypeptide 241375 243030 . - . ID=LTnewLM_130012000.1:pep;Derives_from=LTnewLM_130012000.1;orthologous_to=LmjF.13.0770_mRNA;ortholog_cluster=OG0000978;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 244414 246240 1 - . ID=LTnewLM_130012100 LTnewLM_13 AUGUSTUS mRNA 244414 246240 1 - . ID=LTnewLM_130012100.1;Parent=LTnewLM_130012100 LTnewLM_13 AUGUSTUS CDS 244414 246240 1 - 0 ID=LTnewLM_130012100.1:CDS:1;Parent=LTnewLM_130012100.1 ### LTnewLM_13 . polypeptide 244414 246240 . - . ID=LTnewLM_130012100.1:pep;Derives_from=LTnewLM_130012100.1;orthologous_to=LmjF.13.0780_mRNA;ortholog_cluster=OG0000979;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_13 Pfam protein_match 244633 245298 . - . Parent=LTnewLM_130012100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_13 Pfam protein_match 244960 245982 . - . Parent=LTnewLM_130012100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_13 AUGUSTUS gene 246975 249059 1 - . ID=LTnewLM_130012200 LTnewLM_13 AUGUSTUS mRNA 246975 249059 1 - . ID=LTnewLM_130012200.1;Parent=LTnewLM_130012200 LTnewLM_13 AUGUSTUS CDS 246975 249059 1 - 0 ID=LTnewLM_130012200.1:CDS:1;Parent=LTnewLM_130012200.1 ### LTnewLM_13 . polypeptide 246975 249059 . - . ID=LTnewLM_130012200.1:pep;Derives_from=LTnewLM_130012200.1;orthologous_to=LmjF.13.0790_mRNA;ortholog_cluster=OG0000980;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 249800 250471 1 - . ID=LTnewLM_130012300 LTnewLM_13 AUGUSTUS mRNA 249800 250471 1 - . ID=LTnewLM_130012300.1;Parent=LTnewLM_130012300 LTnewLM_13 AUGUSTUS CDS 249800 250471 1 - 0 ID=LTnewLM_130012300.1:CDS:1;Parent=LTnewLM_130012300.1 ### LTnewLM_13 . polypeptide 249800 250471 . - . ID=LTnewLM_130012300.1:pep;Derives_from=LTnewLM_130012300.1;orthologous_to=LmjF.13.0800_mRNA;ortholog_cluster=OG0000981;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 253116 261065 1 - . ID=LTnewLM_130012400 LTnewLM_13 AUGUSTUS mRNA 253116 261065 1 - . ID=LTnewLM_130012400.1;Parent=LTnewLM_130012400 LTnewLM_13 AUGUSTUS CDS 253116 261065 1 - 0 ID=LTnewLM_130012400.1:CDS:1;Parent=LTnewLM_130012400.1 ### LTnewLM_13 . polypeptide 253116 261065 . - . ID=LTnewLM_130012400.1:pep;Derives_from=LTnewLM_130012400.1;orthologous_to=LmjF.13.0810_mRNA;ortholog_cluster=OG0000982;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 263636 264517 1 - . ID=LTnewLM_130012500 LTnewLM_13 AUGUSTUS mRNA 263636 264517 1 - . ID=LTnewLM_130012500.1;Parent=LTnewLM_130012500 LTnewLM_13 AUGUSTUS CDS 263636 264517 1 - 0 ID=LTnewLM_130012500.1:CDS:1;Parent=LTnewLM_130012500.1 ### LTnewLM_13 . polypeptide 263636 264517 . - . ID=LTnewLM_130012500.1:pep;Derives_from=LTnewLM_130012500.1;orthologous_to=LmjF.13.0820_mRNA;ortholog_cluster=OG0000983;product=term%3DComplex1_LYR-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13233 LTnewLM_13 Pfam protein_match 263732 264112 . - . Parent=LTnewLM_130012500.1:pep;Name=PF13233;signature_desc=Complex1_LYR-like ### LTnewLM_13 AUGUSTUS gene 265396 269106 1 - . ID=LTnewLM_130012600 LTnewLM_13 AUGUSTUS mRNA 265396 269106 1 - . ID=LTnewLM_130012600.1;Parent=LTnewLM_130012600 LTnewLM_13 AUGUSTUS CDS 265396 269106 1 - 0 ID=LTnewLM_130012600.1:CDS:1;Parent=LTnewLM_130012600.1 ### LTnewLM_13 . polypeptide 265396 269106 . - . ID=LTnewLM_130012600.1:pep;Derives_from=LTnewLM_130012600.1;orthologous_to=LmjF.13.0830_mRNA;ortholog_cluster=OG0000984;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 269689 273102 1 - . ID=LTnewLM_130012700 LTnewLM_13 AUGUSTUS mRNA 269689 273102 1 - . ID=LTnewLM_130012700.1;Parent=LTnewLM_130012700 LTnewLM_13 AUGUSTUS CDS 269689 273102 1 - 0 ID=LTnewLM_130012700.1:CDS:1;Parent=LTnewLM_130012700.1 ### LTnewLM_13 . polypeptide 269689 273102 . - . ID=LTnewLM_130012700.1:pep;Derives_from=LTnewLM_130012700.1;orthologous_to=LmjF.13.0840_mRNA;ortholog_cluster=OG0000985;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . polypeptide 275547 277028 . - . ID=LTnewLM_130012800.1:pep;Derives_from=LTnewLM_130012800.1;orthologous_to=LTnewLM_130012800.2,LmjF.13.0850_mRNA;ortholog_cluster=OG0000325;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 275547 277730 2 - . ID=LTnewLM_130012800 LTnewLM_13 AUGUSTUS mRNA 275547 277028 1 - . ID=LTnewLM_130012800.1;Parent=LTnewLM_130012800 LTnewLM_13 AUGUSTUS CDS 275547 277028 1 - 0 ID=LTnewLM_130012800.1:CDS:1;Parent=LTnewLM_130012800.1 LTnewLM_13 AUGUSTUS mRNA 275547 277730 1 - . ID=LTnewLM_130012800.2;Parent=LTnewLM_130012800 LTnewLM_13 AUGUSTUS CDS 275547 277730 1 - 0 ID=LTnewLM_130012800.2:CDS:1;Parent=LTnewLM_130012800.2 ### LTnewLM_13 . polypeptide 275547 277730 . - . ID=LTnewLM_130012800.2:pep;Derives_from=LTnewLM_130012800.2;orthologous_to=LTnewLM_130012800.1,LmjF.13.0850_mRNA;ortholog_cluster=OG0000325;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 278188 280873 0.76 - . ID=LTnewLM_130012900 LTnewLM_13 AUGUSTUS mRNA 278188 280873 0.76 - . ID=LTnewLM_130012900.1;Parent=LTnewLM_130012900 LTnewLM_13 AUGUSTUS CDS 278188 279834 0.76 - 0 ID=LTnewLM_130012900.1:CDS:1;Parent=LTnewLM_130012900.1 LTnewLM_13 AUGUSTUS CDS 279881 280873 1 - 0 ID=LTnewLM_130012900.1:CDS:2;Parent=LTnewLM_130012900.1 ### LTnewLM_13 . polypeptide 278188 280873 . - . ID=LTnewLM_130012900.1:pep;Derives_from=LTnewLM_130012900.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 282155 283198 1 - . ID=LTnewLM_130013000 LTnewLM_13 AUGUSTUS mRNA 282155 283198 1 - . ID=LTnewLM_130013000.1;Parent=LTnewLM_130013000 LTnewLM_13 AUGUSTUS CDS 282155 283198 1 - 0 ID=LTnewLM_130013000.1:CDS:1;Parent=LTnewLM_130013000.1 ### LTnewLM_13 . polypeptide 282155 283198 . - . ID=LTnewLM_130013000.1:pep;Derives_from=LTnewLM_130013000.1;orthologous_to=LmjF.13.0860_mRNA;ortholog_cluster=OG0000986;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 284574 286160 1 - . ID=LTnewLM_130013100 LTnewLM_13 AUGUSTUS mRNA 284574 286160 1 - . ID=LTnewLM_130013100.1;Parent=LTnewLM_130013100 LTnewLM_13 AUGUSTUS CDS 284574 286160 1 - 0 ID=LTnewLM_130013100.1:CDS:1;Parent=LTnewLM_130013100.1 ### LTnewLM_13 . polypeptide 284574 286160 . - . ID=LTnewLM_130013100.1:pep;Derives_from=LTnewLM_130013100.1;orthologous_to=LmjF.13.0870_mRNA;ortholog_cluster=OG0000987;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 290191 292269 1 - . ID=LTnewLM_130013200 LTnewLM_13 AUGUSTUS mRNA 290191 292269 1 - . ID=LTnewLM_130013200.1;Parent=LTnewLM_130013200 LTnewLM_13 AUGUSTUS CDS 290191 292269 1 - 0 ID=LTnewLM_130013200.1:CDS:1;Parent=LTnewLM_130013200.1 ### LTnewLM_13 . polypeptide 290191 292269 . - . ID=LTnewLM_130013200.1:pep;Derives_from=LTnewLM_130013200.1;orthologous_to=LmjF.13.0880_mRNA;ortholog_cluster=OG0000988;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 293197 294231 1 - . ID=LTnewLM_130013300 LTnewLM_13 AUGUSTUS mRNA 293197 294231 1 - . ID=LTnewLM_130013300.1;Parent=LTnewLM_130013300 LTnewLM_13 AUGUSTUS CDS 293197 294231 1 - 0 ID=LTnewLM_130013300.1:CDS:1;Parent=LTnewLM_130013300.1 ### LTnewLM_13 . polypeptide 293197 294231 . - . ID=LTnewLM_130013300.1:pep;Derives_from=LTnewLM_130013300.1;orthologous_to=LmjF.13.0890_mRNA;ortholog_cluster=OG0000989;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 294921 296761 . - . ID=LTnewLM_130013400:pseudogene;coverage=0.986;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.0900_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 294921 296761 . - . ID=LTnewLM_130013400.1;Parent=LTnewLM_130013400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 294921 296761 . - . ID=LTnewLM_130013400.1:pseudogenic_exon:1;Parent=LTnewLM_130013400.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 294921 296761 . - . ID=LTnewLM_130013400.1:pep;Derives_from=LTnewLM_130013400.1;orthologous_to=LmjF.13.0900_mRNA;ortholog_cluster=OG0007445;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 298332 300800 1 - . ID=LTnewLM_130013500 LTnewLM_13 AUGUSTUS mRNA 298332 300800 1 - . ID=LTnewLM_130013500.1;Parent=LTnewLM_130013500 LTnewLM_13 AUGUSTUS CDS 298332 300800 1 - 0 ID=LTnewLM_130013500.1:CDS:1;Parent=LTnewLM_130013500.1 ### LTnewLM_13 . polypeptide 298332 300800 . - . ID=LTnewLM_130013500.1:pep;Derives_from=LTnewLM_130013500.1;orthologous_to=LmjF.13.0910_mRNA;ortholog_cluster=OG0000990;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 302547 307115 1 - . ID=LTnewLM_130013600 LTnewLM_13 AUGUSTUS mRNA 302547 307115 1 - . ID=LTnewLM_130013600.1;Parent=LTnewLM_130013600 LTnewLM_13 AUGUSTUS CDS 302547 307115 1 - 0 ID=LTnewLM_130013600.1:CDS:1;Parent=LTnewLM_130013600.1 ### LTnewLM_13 . polypeptide 302547 307115 . - . ID=LTnewLM_130013600.1:pep;Derives_from=LTnewLM_130013600.1;orthologous_to=LmjF.13.0920_mRNA;ortholog_cluster=OG0000991;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 307904 308731 1 - . ID=LTnewLM_130013700 LTnewLM_13 AUGUSTUS mRNA 307904 308731 1 - . ID=LTnewLM_130013700.1;Parent=LTnewLM_130013700 LTnewLM_13 AUGUSTUS CDS 307904 308731 1 - 0 ID=LTnewLM_130013700.1:CDS:1;Parent=LTnewLM_130013700.1 ### LTnewLM_13 . polypeptide 307904 308731 . - . ID=LTnewLM_130013700.1:pep;Derives_from=LTnewLM_130013700.1;orthologous_to=LmjF.13.0930_mRNA;ortholog_cluster=OG0000992;product=term%3DGlycosyltransferase family 25 (LPS biosynthesis protein)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01755;Ontology_term=GO:0009103 LTnewLM_13 Pfam protein_match 308318 308689 . - . Parent=LTnewLM_130013700.1:pep;Name=PF01755;signature_desc=Glycosyltransferase family 25 (LPS biosynthesis protein);Ontology_term=GO:0009103 ### LTnewLM_13 AUGUSTUS gene 309504 311657 1 - . ID=LTnewLM_130013800 LTnewLM_13 AUGUSTUS mRNA 309504 311657 1 - . ID=LTnewLM_130013800.1;Parent=LTnewLM_130013800 LTnewLM_13 AUGUSTUS CDS 309504 311657 1 - 0 ID=LTnewLM_130013800.1:CDS:1;Parent=LTnewLM_130013800.1 ### LTnewLM_13 . polypeptide 309504 311657 . - . ID=LTnewLM_130013800.1:pep;Derives_from=LTnewLM_130013800.1;orthologous_to=LmjF.13.0940_mRNA;ortholog_cluster=OG0000993;product=term%3DN2%2CN2-dimethylguanosine tRNA methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02005;Ontology_term=GO:0003723,GO:0004809,GO:0008033 LTnewLM_13 Pfam protein_match 309828 310199 . - . Parent=LTnewLM_130013800.1:pep;Name=PF02005;signature_desc=N2%2CN2-dimethylguanosine tRNA methyltransferase;Ontology_term=GO:0003723,GO:0004809,GO:0008033 LTnewLM_13 Pfam protein_match 310494 310928 . - . Parent=LTnewLM_130013800.1:pep;Name=PF02005;signature_desc=N2%2CN2-dimethylguanosine tRNA methyltransferase;Ontology_term=GO:0003723,GO:0004809,GO:0008033 LTnewLM_13 Pfam protein_match 311202 311468 . - . Parent=LTnewLM_130013800.1:pep;Name=PF02005;signature_desc=N2%2CN2-dimethylguanosine tRNA methyltransferase;Ontology_term=GO:0003723,GO:0004809,GO:0008033 ### LTnewLM_13 AUGUSTUS gene 312508 313959 1 - . ID=LTnewLM_130013900 LTnewLM_13 AUGUSTUS mRNA 312508 313959 1 - . ID=LTnewLM_130013900.1;Parent=LTnewLM_130013900 LTnewLM_13 AUGUSTUS CDS 312508 313959 1 - 0 ID=LTnewLM_130013900.1:CDS:1;Parent=LTnewLM_130013900.1 ### LTnewLM_13 . polypeptide 312508 313959 . - . ID=LTnewLM_130013900.1:pep;Derives_from=LTnewLM_130013900.1;orthologous_to=LmjF.13.0950_mRNA;ortholog_cluster=OG0000994;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_13 Pfam protein_match 312520 313941 . - . Parent=LTnewLM_130013900.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_13 AUGUSTUS gene 314808 316505 1 - . ID=LTnewLM_130014000 LTnewLM_13 AUGUSTUS mRNA 314808 316505 1 - . ID=LTnewLM_130014000.1;Parent=LTnewLM_130014000 LTnewLM_13 AUGUSTUS CDS 314808 316505 1 - 0 ID=LTnewLM_130014000.1:CDS:1;Parent=LTnewLM_130014000.1 ### LTnewLM_13 . polypeptide 314808 316505 . - . ID=LTnewLM_130014000.1:pep;Derives_from=LTnewLM_130014000.1;orthologous_to=LmjF.13.0960_mRNA;ortholog_cluster=OG0000995;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Vps4 C terminal oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862|Pfam:PF09336;Ontology_term=GO:0005524 LTnewLM_13 Pfam protein_match 314829 314954 . - . Parent=LTnewLM_130014000.1:pep;Name=PF09336;signature_desc=Vps4 C terminal oligomerisation domain LTnewLM_13 Pfam protein_match 314994 315104 . - . Parent=LTnewLM_130014000.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_13 Pfam protein_match 315171 315563 . - . Parent=LTnewLM_130014000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_13 AUGUSTUS gene 317823 319763 1 - . ID=LTnewLM_130014100 LTnewLM_13 AUGUSTUS mRNA 317823 319763 1 - . ID=LTnewLM_130014100.1;Parent=LTnewLM_130014100 LTnewLM_13 AUGUSTUS CDS 317823 319763 1 - 0 ID=LTnewLM_130014100.1:CDS:1;Parent=LTnewLM_130014100.1 ### LTnewLM_13 . polypeptide 317823 319763 . - . ID=LTnewLM_130014100.1:pep;Derives_from=LTnewLM_130014100.1;orthologous_to=LmjF.13.0970_mRNA;ortholog_cluster=OG0000996;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 320682 325642 . - . ID=LTnewLM_130014200:pseudogene;coverage=0.998;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.0980_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 320682 325642 . - . ID=LTnewLM_130014200.1;Parent=LTnewLM_130014200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 320682 325642 . - . ID=LTnewLM_130014200.1:pseudogenic_exon:1;Parent=LTnewLM_130014200.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 320682 325642 . - . ID=LTnewLM_130014200.1:pep;Derives_from=LTnewLM_130014200.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 326596 328068 1 - . ID=LTnewLM_130014300 LTnewLM_13 AUGUSTUS mRNA 326596 328068 1 - . ID=LTnewLM_130014300.1;Parent=LTnewLM_130014300 LTnewLM_13 AUGUSTUS CDS 326596 328068 1 - 0 ID=LTnewLM_130014300.1:CDS:1;Parent=LTnewLM_130014300.1 ### LTnewLM_13 . polypeptide 326596 328068 . - . ID=LTnewLM_130014300.1:pep;Derives_from=LTnewLM_130014300.1;orthologous_to=LmjF.13.0990_mRNA;ortholog_cluster=OG0000997;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 328896 330284 1 - . ID=LTnewLM_130014400 LTnewLM_13 AUGUSTUS mRNA 328896 330284 1 - . ID=LTnewLM_130014400.1;Parent=LTnewLM_130014400 LTnewLM_13 AUGUSTUS CDS 328896 330284 1 - 0 ID=LTnewLM_130014400.1:CDS:1;Parent=LTnewLM_130014400.1 ### LTnewLM_13 . polypeptide 328896 330284 . - . ID=LTnewLM_130014400.1:pep;Derives_from=LTnewLM_130014400.1;orthologous_to=LmjF.13.1000_mRNA;ortholog_cluster=OG0000998;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 331135 332118 1 - . ID=LTnewLM_130014500 LTnewLM_13 AUGUSTUS mRNA 331135 332118 1 - . ID=LTnewLM_130014500.1;Parent=LTnewLM_130014500 LTnewLM_13 AUGUSTUS CDS 331135 332118 1 - 0 ID=LTnewLM_130014500.1:CDS:1;Parent=LTnewLM_130014500.1 ### LTnewLM_13 . polypeptide 331135 332118 . - . ID=LTnewLM_130014500.1:pep;Derives_from=LTnewLM_130014500.1;orthologous_to=LmjF.13.1010_mRNA;ortholog_cluster=OG0000999;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 333176 337096 1 - . ID=LTnewLM_130014600 LTnewLM_13 AUGUSTUS mRNA 333176 337096 1 - . ID=LTnewLM_130014600.1;Parent=LTnewLM_130014600 LTnewLM_13 AUGUSTUS CDS 333176 337096 1 - 0 ID=LTnewLM_130014600.1:CDS:1;Parent=LTnewLM_130014600.1 ### LTnewLM_13 . polypeptide 333176 337096 . - . ID=LTnewLM_130014600.1:pep;Derives_from=LTnewLM_130014600.1;orthologous_to=LmjF.13.1020_mRNA;ortholog_cluster=OG0001000;product=term%3DCryptococcal mannosyltransferase 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11735 LTnewLM_13 Pfam protein_match 335279 336199 . - . Parent=LTnewLM_130014600.1:pep;Name=PF11735;signature_desc=Cryptococcal mannosyltransferase 1 ### LTnewLM_13 AUGUSTUS gene 338044 339144 1 - . ID=LTnewLM_130014700 LTnewLM_13 AUGUSTUS mRNA 338044 339144 1 - . ID=LTnewLM_130014700.1;Parent=LTnewLM_130014700 LTnewLM_13 AUGUSTUS CDS 338044 339144 1 - 0 ID=LTnewLM_130014700.1:CDS:1;Parent=LTnewLM_130014700.1 ### LTnewLM_13 . polypeptide 338044 339144 . - . ID=LTnewLM_130014700.1:pep;Derives_from=LTnewLM_130014700.1;orthologous_to=LmjF.13.1030_mRNA;ortholog_cluster=OG0001001;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 340056 345248 8.47e+03 - . ID=LTnewLM_130014800:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.13.1040:mRNA 1 1722;original_prot_length=1723 LTnewLM_13 . pseudogenic_transcript 340056 345248 . - . ID=LTnewLM_130014800.1;Parent=LTnewLM_130014800:pseudogene LTnewLM_13 . pseudogenic_exon 340056 345248 . - . ID=LTnewLM_130014800.1:pseudogenic_exon:1;Parent=LTnewLM_130014800.1 ### LTnewLM_13 . polypeptide 340056 345248 . - . ID=LTnewLM_130014800.1:pep;Derives_from=LTnewLM_130014800.1;orthologous_to=LmjF.13.1040_mRNA;ortholog_cluster=OG0007446;product=term%3DSubtilase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00082;Ontology_term=GO:0004252,GO:0006508 LTnewLM_13 Pfam protein_match 343869 344804 . - . Parent=LTnewLM_130014800.1:pep;Name=PF00082;signature_desc=Subtilase family;Ontology_term=GO:0004252,GO:0006508 ### LTnewLM_13 AUGUSTUS gene 346151 346441 0.98 - . ID=LTnewLM_130014900 LTnewLM_13 AUGUSTUS mRNA 346151 346441 0.98 - . ID=LTnewLM_130014900.1;Parent=LTnewLM_130014900 LTnewLM_13 AUGUSTUS CDS 346151 346441 0.98 - 0 ID=LTnewLM_130014900.1:CDS:1;Parent=LTnewLM_130014900.1 ### LTnewLM_13 . polypeptide 346151 346441 . - . ID=LTnewLM_130014900.1:pep;Derives_from=LTnewLM_130014900.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 346501 347025 1 - . ID=LTnewLM_130015000 LTnewLM_13 AUGUSTUS mRNA 346501 347025 1 - . ID=LTnewLM_130015000.1;Parent=LTnewLM_130015000 LTnewLM_13 AUGUSTUS CDS 346501 347025 1 - 0 ID=LTnewLM_130015000.1:CDS:1;Parent=LTnewLM_130015000.1 ### LTnewLM_13 . polypeptide 346501 347025 . - . ID=LTnewLM_130015000.1:pep;Derives_from=LTnewLM_130015000.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 347780 348499 1 - . ID=LTnewLM_130015100 LTnewLM_13 AUGUSTUS mRNA 347780 348499 1 - . ID=LTnewLM_130015100.1;Parent=LTnewLM_130015100 LTnewLM_13 AUGUSTUS CDS 347780 348499 1 - 0 ID=LTnewLM_130015100.1:CDS:1;Parent=LTnewLM_130015100.1 ### LTnewLM_13 . polypeptide 347780 348499 . - . ID=LTnewLM_130015100.1:pep;Derives_from=LTnewLM_130015100.1;orthologous_to=LmjF.13.1050_mRNA;ortholog_cluster=OG0001002;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_13 Pfam protein_match 347819 347932 . - . Parent=LTnewLM_130015100.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_13 AUGUSTUS gene 350512 351438 1 - . ID=LTnewLM_130015200 LTnewLM_13 AUGUSTUS mRNA 350512 351438 1 - . ID=LTnewLM_130015200.1;Parent=LTnewLM_130015200 LTnewLM_13 AUGUSTUS CDS 350512 351438 1 - 0 ID=LTnewLM_130015200.1:CDS:1;Parent=LTnewLM_130015200.1 ### LTnewLM_13 . polypeptide 350512 351438 . - . ID=LTnewLM_130015200.1:pep;Derives_from=LTnewLM_130015200.1;orthologous_to=LmjF.13.1060_mRNA;ortholog_cluster=OG0001003;product=term%3DOxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_13 Pfam protein_match 350572 350925 . - . Parent=LTnewLM_130015200.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_13 Pfam protein_match 351004 351333 . - . Parent=LTnewLM_130015200.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_13 AUGUSTUS gene 355006 362070 1 - . ID=LTnewLM_130015300 LTnewLM_13 AUGUSTUS mRNA 355006 362070 1 - . ID=LTnewLM_130015300.1;Parent=LTnewLM_130015300 LTnewLM_13 AUGUSTUS CDS 355006 362070 1 - 0 ID=LTnewLM_130015300.1:CDS:1;Parent=LTnewLM_130015300.1 ### LTnewLM_13 . polypeptide 355006 362070 . - . ID=LTnewLM_130015300.1:pep;Derives_from=LTnewLM_130015300.1;orthologous_to=LmjF.13.1070_mRNA;ortholog_cluster=OG0001004;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 Liftoff gene 362621 367390 . - . ID=LTnewLM_130015400;coverage=0.996;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.1080_0 LTnewLM_13 Liftoff mRNA 362621 367390 . - . ID=LTnewLM_130015400.1;Parent=LTnewLM_130015400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 362621 367390 . - 0 ID=LTnewLM_130015400.1:CDS:1;Parent=LTnewLM_130015400.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 362621 367390 . - . ID=LTnewLM_130015400.1:pep;Derives_from=LTnewLM_130015400.1;orthologous_to=LmjF.13.1080_mRNA;ortholog_cluster=OG0001005;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 371288 372604 1 - . ID=LTnewLM_130015500 LTnewLM_13 AUGUSTUS mRNA 371288 372604 1 - . ID=LTnewLM_130015500.1;Parent=LTnewLM_130015500 LTnewLM_13 AUGUSTUS CDS 371288 372604 1 - 0 ID=LTnewLM_130015500.1:CDS:1;Parent=LTnewLM_130015500.1 ### LTnewLM_13 . polypeptide 371288 372604 . - . ID=LTnewLM_130015500.1:pep;Derives_from=LTnewLM_130015500.1;orthologous_to=LmjF.13.1090_mRNA;ortholog_cluster=OG0001006;product=term%3DProteasomal ATPase OB C-terminal domain/AAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16450|Pfam:PF07728|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_13 Pfam protein_match 371354 371482 . - . Parent=LTnewLM_130015500.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_13 Pfam protein_match 371552 371947 . - . Parent=LTnewLM_130015500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_13 Pfam protein_match 371588 371950 . - . Parent=LTnewLM_130015500.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_13 Pfam protein_match 372125 372283 . - . Parent=LTnewLM_130015500.1:pep;Name=PF16450;signature_desc=Proteasomal ATPase OB C-terminal domain ### LTnewLM_13 . polypeptide 374696 377923 . - . ID=LTnewLM_130015600.1:pep;Derives_from=LTnewLM_130015600.1;orthologous_to=LmjF.13.1100.1_mRNA,LmjF.13.1100.2_mRNA;ortholog_cluster=OG0000513;product=term%3DtRNA synthetases class I (I%2C L%2C M and V)/tRNA synthetases class I (M)/tRNA synthetases class I (C) catalytic domain/Anticodon-binding domain of tRNA ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00133|Pfam:PF09334|Pfam:PF01406|Pfam:PF08264;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_13 Pfam protein_match 375116 375505 . - . Parent=LTnewLM_130015600.1:pep;Name=PF08264;signature_desc=Anticodon-binding domain of tRNA ligase;Ontology_term=GO:0000166,GO:0006418 LTnewLM_13 Pfam protein_match 375602 375865 . - . Parent=LTnewLM_130015600.1:pep;Name=PF09334;signature_desc=tRNA synthetases class I (M);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_13 Pfam protein_match 375620 375904 . - . Parent=LTnewLM_130015600.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_13 Pfam protein_match 375653 375880 . - . Parent=LTnewLM_130015600.1:pep;Name=PF01406;signature_desc=tRNA synthetases class I (C) catalytic domain LTnewLM_13 Pfam protein_match 376163 377383 . - . Parent=LTnewLM_130015600.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_13 Pfam protein_match 377609 377800 . - . Parent=LTnewLM_130015600.1:pep;Name=PF09334;signature_desc=tRNA synthetases class I (M);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_13 Pfam protein_match 377621 377866 . - . Parent=LTnewLM_130015600.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_13 . polypeptide 374696 378155 . - . ID=LTnewLM_130015600.2:pep;Derives_from=LTnewLM_130015600.2;product=term%3Dhypothetical protein ### LTnewLM_13 . pseudogene 374696 378277 . - . ID=LTnewLM_130015600:pseudogene;coverage=0.997;sequence_ID=0.954;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.1100_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 374696 378156 . - . ID=LTnewLM_130015600.1;Parent=LTnewLM_130015600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 374696 377923 . - . ID=LTnewLM_130015600.1:pseudogenic_exon:1;Parent=LTnewLM_130015600.1;extra_copy_number=0 LTnewLM_13 . pseudogenic_transcript 374696 378277 . - . ID=LTnewLM_130015600.2;Parent=LTnewLM_130015600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 374696 378155 . - . ID=LTnewLM_130015600.2:pseudogenic_exon:1;Parent=LTnewLM_130015600.2;extra_copy_number=0 ### LTnewLM_13 AUGUSTUS gene 379549 381144 1 - . ID=LTnewLM_130015700 LTnewLM_13 AUGUSTUS mRNA 379549 381144 1 - . ID=LTnewLM_130015700.1;Parent=LTnewLM_130015700 LTnewLM_13 AUGUSTUS CDS 379549 381144 1 - 0 ID=LTnewLM_130015700.1:CDS:1;Parent=LTnewLM_130015700.1 ### LTnewLM_13 . polypeptide 379549 381144 . - . ID=LTnewLM_130015700.1:pep;Derives_from=LTnewLM_130015700.1;orthologous_to=LmjF.13.1110_mRNA;ortholog_cluster=OG0001007;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 382267 382536 1 - . ID=LTnewLM_130015800 LTnewLM_13 AUGUSTUS mRNA 382267 382536 1 - . ID=LTnewLM_130015800.1;Parent=LTnewLM_130015800 LTnewLM_13 AUGUSTUS CDS 382267 382536 1 - 0 ID=LTnewLM_130015800.1:CDS:1;Parent=LTnewLM_130015800.1 ### LTnewLM_13 . polypeptide 382267 382536 . - . ID=LTnewLM_130015800.1:pep;Derives_from=LTnewLM_130015800.1;orthologous_to=LmjF.13.1120_mRNA;ortholog_cluster=OG0001008;product=term%3DRNA polymerases N / 8 kDa subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01194;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_13 Pfam protein_match 382369 382533 . - . Parent=LTnewLM_130015800.1:pep;Name=PF01194;signature_desc=RNA polymerases N / 8 kDa subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_13 AUGUSTUS gene 383808 385586 1 - . ID=LTnewLM_130015900 LTnewLM_13 AUGUSTUS mRNA 383808 385586 1 - . ID=LTnewLM_130015900.1;Parent=LTnewLM_130015900 LTnewLM_13 AUGUSTUS CDS 383808 385586 1 - 0 ID=LTnewLM_130015900.1:CDS:1;Parent=LTnewLM_130015900.1 ### LTnewLM_13 . polypeptide 383808 385586 . - . ID=LTnewLM_130015900.1:pep;Derives_from=LTnewLM_130015900.1;orthologous_to=LmjF.13.1130_mRNA;ortholog_cluster=OG0001009;product=term%3DRMND1/Sif2-Sif3/Mrx10%2C DUF155%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02582 LTnewLM_13 Pfam protein_match 383988 384569 . - . Parent=LTnewLM_130015900.1:pep;Name=PF02582;signature_desc=RMND1/Sif2-Sif3/Mrx10%2C DUF155 ### LTnewLM_13 AUGUSTUS gene 386704 387915 1 - . ID=LTnewLM_130016000 LTnewLM_13 AUGUSTUS mRNA 386704 387915 1 - . ID=LTnewLM_130016000.1;Parent=LTnewLM_130016000 LTnewLM_13 AUGUSTUS CDS 386704 387915 1 - 0 ID=LTnewLM_130016000.1:CDS:1;Parent=LTnewLM_130016000.1 ### LTnewLM_13 . polypeptide 386704 387915 . - . ID=LTnewLM_130016000.1:pep;Derives_from=LTnewLM_130016000.1;orthologous_to=LmjF.13.1140_mRNA;ortholog_cluster=OG0001010;product=term%3DAlpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12697 LTnewLM_13 Pfam protein_match 386749 387822 . - . Parent=LTnewLM_130016000.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_13 AUGUSTUS gene 389200 390162 1 - . ID=LTnewLM_130016100 LTnewLM_13 AUGUSTUS mRNA 389200 390162 1 - . ID=LTnewLM_130016100.1;Parent=LTnewLM_130016100 LTnewLM_13 AUGUSTUS CDS 389200 390162 1 - 0 ID=LTnewLM_130016100.1:CDS:1;Parent=LTnewLM_130016100.1 ### LTnewLM_13 . polypeptide 389200 390162 . - . ID=LTnewLM_130016100.1:pep;Derives_from=LTnewLM_130016100.1;orthologous_to=LmjF.13.1150_mRNA;ortholog_cluster=OG0001011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 390910 391518 1 - . ID=LTnewLM_130016200 LTnewLM_13 AUGUSTUS mRNA 390910 391518 1 - . ID=LTnewLM_130016200.1;Parent=LTnewLM_130016200 LTnewLM_13 AUGUSTUS CDS 390910 391518 1 - 0 ID=LTnewLM_130016200.1:CDS:1;Parent=LTnewLM_130016200.1 ### LTnewLM_13 . polypeptide 390910 391518 . - . ID=LTnewLM_130016200.1:pep;Derives_from=LTnewLM_130016200.1;orthologous_to=LmjF.13.1160_mRNA;ortholog_cluster=OG0001012;product=term%3DEF-hand domain pair/EF-hand domain/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13405|Pfam:PF00036|Pfam:PF13202;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 390925 391044 . - . Parent=LTnewLM_130016200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 391408 391488 . - . Parent=LTnewLM_130016200.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 391411 391488 . - . Parent=LTnewLM_130016200.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 391411 391500 . - . Parent=LTnewLM_130016200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 391414 391485 . - . Parent=LTnewLM_130016200.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_13 Liftoff gene 392258 394108 . - . ID=LTnewLM_130016300;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.1170_0 LTnewLM_13 Liftoff mRNA 392258 394108 . - . ID=LTnewLM_130016300.1;Parent=LTnewLM_130016300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 392258 394108 . - 0 ID=LTnewLM_130016300.1:CDS:1;Parent=LTnewLM_130016300.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 392258 394108 . - . ID=LTnewLM_130016300.1:pep;Derives_from=LTnewLM_130016300.1;orthologous_to=LmjF.13.1170_mRNA;ortholog_cluster=OG0001013;product=term%3DMitochondrial glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02330;Ontology_term=GO:0005759 LTnewLM_13 Pfam protein_match 392300 392485 . - . Parent=LTnewLM_130016300.1:pep;Name=PF02330;signature_desc=Mitochondrial glycoprotein;Ontology_term=GO:0005759 ### LTnewLM_13 . polypeptide 395349 395486 . - . ID=LTnewLM_130016400.1:pep;Derives_from=LTnewLM_130016400.1;orthologous_to=LmjF.13.1180.1_mRNA;ortholog_cluster=OG0001014;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_13 Pfam protein_match 395370 395486 . - . Parent=LTnewLM_130016400.1:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_13 . polypeptide 395349 395705 . - . ID=LTnewLM_130016400.2:pep;Derives_from=LTnewLM_130016400.2;orthologous_to=LmjF.13.1180.2_mRNA;ortholog_cluster=OG0001015;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_13 Pfam protein_match 395370 395642 . - . Parent=LTnewLM_130016400.2:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_13 Liftoff gene 395349 395782 . - . ID=LTnewLM_130016400;coverage=1.0;sequence_ID=0.968;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.13.1180_0 LTnewLM_13 Liftoff mRNA 395349 395669 . - . ID=LTnewLM_130016400.1;Parent=LTnewLM_130016400;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 395349 395486 . - 0 ID=LTnewLM_130016400.1:CDS:1;Parent=LTnewLM_130016400.1;extra_copy_number=0 LTnewLM_13 Liftoff five_prime_UTR 395487 395669 . - . ID=LTnewLM_130016400:five_prime_UTR;Parent=LTnewLM_130016400.1;extra_copy_number=0 LTnewLM_13 Liftoff mRNA 395349 395782 . - . ID=LTnewLM_130016400.2;Parent=LTnewLM_130016400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 395349 395705 . - 0 ID=LTnewLM_130016400.2:CDS:1;Parent=LTnewLM_130016400.2;extra_copy_number=0 LTnewLM_13 Liftoff five_prime_UTR 395706 395782 . - . ID=LTnewLM_130016400:five_prime_UTR.1;Parent=LTnewLM_130016400.2;extra_copy_number=0 ### LTnewLM_13 AUGUSTUS gene 398260 400392 1 - . ID=LTnewLM_130016500 LTnewLM_13 AUGUSTUS mRNA 398260 400392 1 - . ID=LTnewLM_130016500.1;Parent=LTnewLM_130016500 LTnewLM_13 AUGUSTUS CDS 398260 400392 1 - 0 ID=LTnewLM_130016500.1:CDS:1;Parent=LTnewLM_130016500.1 ### LTnewLM_13 . polypeptide 398260 400392 . - . ID=LTnewLM_130016500.1:pep;Derives_from=LTnewLM_130016500.1;orthologous_to=LmjF.13.1190_mRNA;ortholog_cluster=OG0001016;product=term%3DAdenylosuccinate synthetase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00709;Ontology_term=GO:0005525,GO:0004019,GO:0006164 LTnewLM_13 Pfam protein_match 398278 399876 . - . Parent=LTnewLM_130016500.1:pep;Name=PF00709;signature_desc=Adenylosuccinate synthetase;Ontology_term=GO:0004019,GO:0005525,GO:0006164 ### LTnewLM_13 AUGUSTUS gene 402771 403328 1 - . ID=LTnewLM_130016600 LTnewLM_13 AUGUSTUS mRNA 402771 403328 1 - . ID=LTnewLM_130016600.1;Parent=LTnewLM_130016600 LTnewLM_13 AUGUSTUS CDS 402771 403328 1 - 0 ID=LTnewLM_130016600.1:CDS:1;Parent=LTnewLM_130016600.1 ### LTnewLM_13 . polypeptide 402771 403328 . - . ID=LTnewLM_130016600.1:pep;Derives_from=LTnewLM_130016600.1;orthologous_to=LmjF.13.1200_mRNA;ortholog_cluster=OG0001017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 408173 409678 1 - . ID=LTnewLM_130016700 LTnewLM_13 AUGUSTUS mRNA 408173 409678 1 - . ID=LTnewLM_130016700.1;Parent=LTnewLM_130016700 LTnewLM_13 AUGUSTUS CDS 408173 409678 1 - 0 ID=LTnewLM_130016700.1:CDS:1;Parent=LTnewLM_130016700.1 ### LTnewLM_13 . polypeptide 408173 409678 . - . ID=LTnewLM_130016700.1:pep;Derives_from=LTnewLM_130016700.1;orthologous_to=LmjF.13.1210_mRNA;ortholog_cluster=OG0001018;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_13 Pfam protein_match 408194 408784 . - . Parent=LTnewLM_130016700.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 LTnewLM_13 Pfam protein_match 408905 409279 . - . Parent=LTnewLM_130016700.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_13 AUGUSTUS gene 411200 412021 1 - . ID=LTnewLM_130016800 LTnewLM_13 AUGUSTUS mRNA 411200 412021 1 - . ID=LTnewLM_130016800.1;Parent=LTnewLM_130016800 LTnewLM_13 AUGUSTUS CDS 411200 412021 1 - 0 ID=LTnewLM_130016800.1:CDS:1;Parent=LTnewLM_130016800.1 ### LTnewLM_13 . polypeptide 411200 412021 . - . ID=LTnewLM_130016800.1:pep;Derives_from=LTnewLM_130016800.1;orthologous_to=LTnewLM_130016900.1,LmjF.13.1220_mRNA,LmjF.13.1230_mRNA;ortholog_cluster=OG0000117;product=term%3DRS4NT (NUC023) domain/S4 domain/Ribosomal family S4e/40S ribosomal protein S4 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08071|Pfam:PF01479|Pfam:PF00900|Pfam:PF16121;Ontology_term=GO:0003723 LTnewLM_13 Pfam protein_match 411257 411397 . - . Parent=LTnewLM_130016800.1:pep;Name=PF16121;signature_desc=40S ribosomal protein S4 C-terminus LTnewLM_13 Pfam protein_match 411530 411748 . - . Parent=LTnewLM_130016800.1:pep;Name=PF00900;signature_desc=Ribosomal family S4e LTnewLM_13 Pfam protein_match 411764 411904 . - . Parent=LTnewLM_130016800.1:pep;Name=PF01479;signature_desc=S4 domain;Ontology_term=GO:0003723 LTnewLM_13 Pfam protein_match 411917 412015 . - . Parent=LTnewLM_130016800.1:pep;Name=PF08071;signature_desc=RS4NT (NUC023) domain ### LTnewLM_13 AUGUSTUS gene 413848 414669 1 - . ID=LTnewLM_130016900 LTnewLM_13 AUGUSTUS mRNA 413848 414669 1 - . ID=LTnewLM_130016900.1;Parent=LTnewLM_130016900 LTnewLM_13 AUGUSTUS CDS 413848 414669 1 - 0 ID=LTnewLM_130016900.1:CDS:1;Parent=LTnewLM_130016900.1 ### LTnewLM_13 . polypeptide 413848 414669 . - . ID=LTnewLM_130016900.1:pep;Derives_from=LTnewLM_130016900.1;orthologous_to=LTnewLM_130016800.1,LmjF.13.1220_mRNA,LmjF.13.1230_mRNA;ortholog_cluster=OG0000117;product=term%3DRS4NT (NUC023) domain/S4 domain/Ribosomal family S4e/40S ribosomal protein S4 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08071|Pfam:PF01479|Pfam:PF00900|Pfam:PF16121;Ontology_term=GO:0003723 LTnewLM_13 Pfam protein_match 413905 414045 . - . Parent=LTnewLM_130016900.1:pep;Name=PF16121;signature_desc=40S ribosomal protein S4 C-terminus LTnewLM_13 Pfam protein_match 414178 414396 . - . Parent=LTnewLM_130016900.1:pep;Name=PF00900;signature_desc=Ribosomal family S4e LTnewLM_13 Pfam protein_match 414412 414552 . - . Parent=LTnewLM_130016900.1:pep;Name=PF01479;signature_desc=S4 domain;Ontology_term=GO:0003723 LTnewLM_13 Pfam protein_match 414565 414663 . - . Parent=LTnewLM_130016900.1:pep;Name=PF08071;signature_desc=RS4NT (NUC023) domain ### LTnewLM_13 AUGUSTUS gene 416450 418075 1 - . ID=LTnewLM_130017000 LTnewLM_13 AUGUSTUS mRNA 416450 418075 1 - . ID=LTnewLM_130017000.1;Parent=LTnewLM_130017000 LTnewLM_13 AUGUSTUS CDS 416450 418075 1 - 0 ID=LTnewLM_130017000.1:CDS:1;Parent=LTnewLM_130017000.1 ### LTnewLM_13 . polypeptide 416450 418075 . - . ID=LTnewLM_130017000.1:pep;Derives_from=LTnewLM_130017000.1;orthologous_to=LmjF.13.1240_mRNA;ortholog_cluster=OG0001019;product=term%3DThiamin pyrophosphokinase%2C vitamin B1 binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04265;Ontology_term=GO:0030975,GO:0009229 LTnewLM_13 Pfam protein_match 416618 416800 . - . Parent=LTnewLM_130017000.1:pep;Name=PF04265;signature_desc=Thiamin pyrophosphokinase%2C vitamin B1 binding domain;Ontology_term=GO:0030975,GO:0009229 ### LTnewLM_13 Aragorn_1.2.36 gene 417374 417451 . + . ID=LTnewLM_130017100 LTnewLM_13 Aragorn_1.2.36 tRNA 417374 417451 . + . ID=LTnewLM_130017100:tRNA;Parent=LTnewLM_130017100;aa=?(Thr|Tyr);anticodon=gt;gc_content=70.5 ### LTnewLM_13 . polypeptide 419106 419558 . - . ID=LTnewLM_130017200.1:pep;Derives_from=LTnewLM_130017200.1;orthologous_to=LmjF.13.1250.2_mRNA;ortholog_cluster=OG0007447;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . polypeptide 419106 420048 . - . ID=LTnewLM_130017200.2:pep;Derives_from=LTnewLM_130017200.2;product=term%3Dhypothetical protein ### LTnewLM_13 . pseudogene 419106 420451 . - . ID=LTnewLM_130017200:pseudogene;coverage=0.991;sequence_ID=0.896;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.1250_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 419106 419717 . - . ID=LTnewLM_130017200.1;Parent=LTnewLM_130017200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 419106 419558 . - . ID=LTnewLM_130017200.1:pseudogenic_exon:1;Parent=LTnewLM_130017200.1;extra_copy_number=0 LTnewLM_13 . pseudogenic_transcript 419106 420451 . - . ID=LTnewLM_130017200.2;Parent=LTnewLM_130017200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 419106 420048 . - . ID=LTnewLM_130017200.2:pseudogenic_exon:1;Parent=LTnewLM_130017200.2;extra_copy_number=0 ### LTnewLM_13 AUGUSTUS gene 421906 422484 1 - . ID=LTnewLM_130017300 LTnewLM_13 AUGUSTUS mRNA 421906 422484 1 - . ID=LTnewLM_130017300.1;Parent=LTnewLM_130017300 LTnewLM_13 AUGUSTUS CDS 421906 422484 1 - 0 ID=LTnewLM_130017300.1:CDS:1;Parent=LTnewLM_130017300.1 ### LTnewLM_13 . polypeptide 421906 422484 . - . ID=LTnewLM_130017300.1:pep;Derives_from=LTnewLM_130017300.1;orthologous_to=LmjF.13.1260_mRNA;ortholog_cluster=OG0001020;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 425265 425708 1 - . ID=LTnewLM_130017400 LTnewLM_13 AUGUSTUS mRNA 425265 425708 1 - . ID=LTnewLM_130017400.1;Parent=LTnewLM_130017400 LTnewLM_13 AUGUSTUS CDS 425265 425708 1 - 0 ID=LTnewLM_130017400.1:CDS:1;Parent=LTnewLM_130017400.1 ### LTnewLM_13 . polypeptide 425265 425708 . - . ID=LTnewLM_130017400.1:pep;Derives_from=LTnewLM_130017400.1;product=term%3Dhypothetical protein ### LTnewLM_13 . pseudogene 427429 430057 . - . ID=LTnewLM_130017500:pseudogene;coverage=0.998;sequence_ID=0.900;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.1270_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 427429 430057 . - . ID=LTnewLM_130017500.1;Parent=LTnewLM_130017500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 427429 430057 . - . ID=LTnewLM_130017500.1:pseudogenic_exon:1;Parent=LTnewLM_130017500.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 427429 430057 . - . ID=LTnewLM_130017500.1:pep;Derives_from=LTnewLM_130017500.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 432702 433685 1 - . ID=LTnewLM_130017600 LTnewLM_13 AUGUSTUS mRNA 432702 433685 1 - . ID=LTnewLM_130017600.1;Parent=LTnewLM_130017600 LTnewLM_13 AUGUSTUS CDS 432702 433685 1 - 0 ID=LTnewLM_130017600.1:CDS:1;Parent=LTnewLM_130017600.1 ### LTnewLM_13 . polypeptide 432702 433685 . - . ID=LTnewLM_130017600.1:pep;Derives_from=LTnewLM_130017600.1;orthologous_to=LmjF.13.1280_mRNA;ortholog_cluster=OG0001021;product=term%3DConserved hypothetical ATP binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03029 LTnewLM_13 Pfam protein_match 433017 433598 . - . Parent=LTnewLM_130017600.1:pep;Name=PF03029;signature_desc=Conserved hypothetical ATP binding protein ### LTnewLM_13 AUGUSTUS gene 435096 438185 1 - . ID=LTnewLM_130017700 LTnewLM_13 AUGUSTUS mRNA 435096 438185 1 - . ID=LTnewLM_130017700.1;Parent=LTnewLM_130017700 LTnewLM_13 AUGUSTUS CDS 435096 438185 1 - 0 ID=LTnewLM_130017700.1:CDS:1;Parent=LTnewLM_130017700.1 ### LTnewLM_13 . polypeptide 435096 438185 . - . ID=LTnewLM_130017700.1:pep;Derives_from=LTnewLM_130017700.1;orthologous_to=LmjF.13.1290_mRNA;ortholog_cluster=OG0001022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 439540 440130 1 - . ID=LTnewLM_130017800 LTnewLM_13 AUGUSTUS mRNA 439540 440130 1 - . ID=LTnewLM_130017800.1;Parent=LTnewLM_130017800 LTnewLM_13 AUGUSTUS CDS 439540 440130 1 - 0 ID=LTnewLM_130017800.1:CDS:1;Parent=LTnewLM_130017800.1 ### LTnewLM_13 . polypeptide 439540 440130 . - . ID=LTnewLM_130017800.1:pep;Derives_from=LTnewLM_130017800.1;orthologous_to=LmjF.13.1300_mRNA;ortholog_cluster=OG0001023;product=term%3DComplex1_LYR-like/Complex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13232|Pfam:PF05347 LTnewLM_13 Pfam protein_match 439771 440058 . - . Parent=LTnewLM_130017800.1:pep;Name=PF13232;signature_desc=Complex1_LYR-like LTnewLM_13 Pfam protein_match 439945 440049 . - . Parent=LTnewLM_130017800.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_13 AUGUSTUS gene 443363 444625 1 - . ID=LTnewLM_130017900 LTnewLM_13 AUGUSTUS mRNA 443363 444625 1 - . ID=LTnewLM_130017900.1;Parent=LTnewLM_130017900 LTnewLM_13 AUGUSTUS CDS 443363 444625 1 - 0 ID=LTnewLM_130017900.1:CDS:1;Parent=LTnewLM_130017900.1 ### LTnewLM_13 . polypeptide 443363 444625 . - . ID=LTnewLM_130017900.1:pep;Derives_from=LTnewLM_130017900.1;orthologous_to=LmjF.13.1310_mRNA;ortholog_cluster=OG0001024;product=term%3DIGP family C-type lectin domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16825 LTnewLM_13 Pfam protein_match 443945 444439 . - . Parent=LTnewLM_130017900.1:pep;Name=PF16825;signature_desc=IGP family C-type lectin domain ### LTnewLM_13 AUGUSTUS gene 448122 449519 1 - . ID=LTnewLM_130018000 LTnewLM_13 AUGUSTUS mRNA 448122 449519 1 - . ID=LTnewLM_130018000.1;Parent=LTnewLM_130018000 LTnewLM_13 AUGUSTUS CDS 448122 449519 1 - 0 ID=LTnewLM_130018000.1:CDS:1;Parent=LTnewLM_130018000.1 ### LTnewLM_13 . polypeptide 448122 449519 . - . ID=LTnewLM_130018000.1:pep;Derives_from=LTnewLM_130018000.1;orthologous_to=LmjF.13.1320_mRNA;ortholog_cluster=OG0001025;product=term%3DIGP family C-type lectin domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16825 LTnewLM_13 Pfam protein_match 448983 449357 . - . Parent=LTnewLM_130018000.1:pep;Name=PF16825;signature_desc=IGP family C-type lectin domain ### LTnewLM_13 AUGUSTUS gene 451477 452949 1 - . ID=LTnewLM_130018100 LTnewLM_13 AUGUSTUS mRNA 451477 452949 1 - . ID=LTnewLM_130018100.1;Parent=LTnewLM_130018100 LTnewLM_13 AUGUSTUS CDS 451477 452949 1 - 0 ID=LTnewLM_130018100.1:CDS:1;Parent=LTnewLM_130018100.1 ### LTnewLM_13 . polypeptide 451477 452949 . - . ID=LTnewLM_130018100.1:pep;Derives_from=LTnewLM_130018100.1;orthologous_to=LmjF.13.1330_mRNA;ortholog_cluster=OG0001026;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 454093 458262 1 - . ID=LTnewLM_130018200 LTnewLM_13 AUGUSTUS mRNA 454093 458262 1 - . ID=LTnewLM_130018200.1;Parent=LTnewLM_130018200 LTnewLM_13 AUGUSTUS CDS 454093 458262 1 - 0 ID=LTnewLM_130018200.1:CDS:1;Parent=LTnewLM_130018200.1 ### LTnewLM_13 . polypeptide 454093 458262 . - . ID=LTnewLM_130018200.1:pep;Derives_from=LTnewLM_130018200.1;orthologous_to=LmjF.13.1340_mRNA;ortholog_cluster=OG0001027;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 459846 463280 1 - . ID=LTnewLM_130018300 LTnewLM_13 AUGUSTUS mRNA 459846 463280 1 - . ID=LTnewLM_130018300.1;Parent=LTnewLM_130018300 LTnewLM_13 AUGUSTUS CDS 459846 463280 1 - 0 ID=LTnewLM_130018300.1:CDS:1;Parent=LTnewLM_130018300.1 ### LTnewLM_13 . polypeptide 459846 463280 . - . ID=LTnewLM_130018300.1:pep;Derives_from=LTnewLM_130018300.1;orthologous_to=LmjF.13.1350_mRNA;ortholog_cluster=OG0001028;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_13 Pfam protein_match 459876 459995 . - . Parent=LTnewLM_130018300.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_13 AUGUSTUS gene 464856 467369 1 - . ID=LTnewLM_130018400 LTnewLM_13 AUGUSTUS mRNA 464856 467369 1 - . ID=LTnewLM_130018400.1;Parent=LTnewLM_130018400 LTnewLM_13 AUGUSTUS CDS 464856 467369 1 - 0 ID=LTnewLM_130018400.1:CDS:1;Parent=LTnewLM_130018400.1 ### LTnewLM_13 . polypeptide 464856 467369 . - . ID=LTnewLM_130018400.1:pep;Derives_from=LTnewLM_130018400.1;orthologous_to=LmjF.13.1360_mRNA;ortholog_cluster=OG0001029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 469624 471717 1 - . ID=LTnewLM_130018500 LTnewLM_13 AUGUSTUS mRNA 469624 471717 1 - . ID=LTnewLM_130018500.1;Parent=LTnewLM_130018500 LTnewLM_13 AUGUSTUS CDS 469624 471717 1 - 0 ID=LTnewLM_130018500.1:CDS:1;Parent=LTnewLM_130018500.1 ### LTnewLM_13 . polypeptide 469624 471717 . - . ID=LTnewLM_130018500.1:pep;Derives_from=LTnewLM_130018500.1;orthologous_to=LmjF.13.1370_mRNA;ortholog_cluster=OG0001030;product=term%3DRPC5 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04801;Ontology_term=GO:0006351,GO:0003899,GO:0005634 LTnewLM_13 Pfam protein_match 470344 471687 . - . Parent=LTnewLM_130018500.1:pep;Name=PF04801;signature_desc=RPC5 protein;Ontology_term=GO:0003899,GO:0006351,GO:0005634 ### LTnewLM_13 AUGUSTUS gene 472729 474498 1 - . ID=LTnewLM_130018600 LTnewLM_13 AUGUSTUS mRNA 472729 474498 1 - . ID=LTnewLM_130018600.1;Parent=LTnewLM_130018600 LTnewLM_13 AUGUSTUS CDS 472729 474498 1 - 0 ID=LTnewLM_130018600.1:CDS:1;Parent=LTnewLM_130018600.1 ### LTnewLM_13 . polypeptide 472729 474498 . - . ID=LTnewLM_130018600.1:pep;Derives_from=LTnewLM_130018600.1;orthologous_to=LmjF.13.1380_mRNA;ortholog_cluster=OG0001031;product=term%3DEndomembrane protein 70%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02990;Ontology_term=GO:0016021 LTnewLM_13 Pfam protein_match 472867 474348 . - . Parent=LTnewLM_130018600.1:pep;Name=PF02990;signature_desc=Endomembrane protein 70;Ontology_term=GO:0016021 ### LTnewLM_13 AUGUSTUS gene 475698 476912 1 - . ID=LTnewLM_130018700 LTnewLM_13 AUGUSTUS mRNA 475698 476912 1 - . ID=LTnewLM_130018700.1;Parent=LTnewLM_130018700 LTnewLM_13 AUGUSTUS CDS 475698 476912 1 - 0 ID=LTnewLM_130018700.1:CDS:1;Parent=LTnewLM_130018700.1 ### LTnewLM_13 . polypeptide 475698 476912 . - . ID=LTnewLM_130018700.1:pep;Derives_from=LTnewLM_130018700.1;orthologous_to=LmjF.13.1390_mRNA;ortholog_cluster=OG0001032;product=term%3DBeta-lactamase superfamily domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13483|Pfam:PF12706 LTnewLM_13 Pfam protein_match 475830 476033 . - . Parent=LTnewLM_130018700.1:pep;Name=PF12706;signature_desc=Beta-lactamase superfamily domain LTnewLM_13 Pfam protein_match 476154 476603 . - . Parent=LTnewLM_130018700.1:pep;Name=PF13483;signature_desc=Beta-lactamase superfamily domain LTnewLM_13 Pfam protein_match 476160 476552 . - . Parent=LTnewLM_130018700.1:pep;Name=PF12706;signature_desc=Beta-lactamase superfamily domain ### LTnewLM_13 AUGUSTUS gene 477399 479744 1 - . ID=LTnewLM_130018800 LTnewLM_13 AUGUSTUS mRNA 477399 479744 1 - . ID=LTnewLM_130018800.1;Parent=LTnewLM_130018800 LTnewLM_13 AUGUSTUS CDS 477399 479744 1 - 0 ID=LTnewLM_130018800.1:CDS:1;Parent=LTnewLM_130018800.1 ### LTnewLM_13 . polypeptide 477399 479744 . - . ID=LTnewLM_130018800.1:pep;Derives_from=LTnewLM_130018800.1;orthologous_to=LmjF.13.1400_mRNA;ortholog_cluster=OG0001033;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 483524 487750 . - . ID=LTnewLM_130018900:pseudogene;coverage=0.979;sequence_ID=0.890;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.1410_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 483524 487750 . - . ID=LTnewLM_130018900.1;Parent=LTnewLM_130018900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 483524 487750 . - . ID=LTnewLM_130018900.1:pseudogenic_exon:1;Parent=LTnewLM_130018900.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 483524 487750 . - . ID=LTnewLM_130018900.1:pep;Derives_from=LTnewLM_130018900.1;orthologous_to=LmjF.13.1410_mRNA;ortholog_cluster=OG0007448;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 491387 491686 1 - . ID=LTnewLM_130019000 LTnewLM_13 AUGUSTUS mRNA 491387 491686 1 - . ID=LTnewLM_130019000.1;Parent=LTnewLM_130019000 LTnewLM_13 AUGUSTUS CDS 491387 491686 1 - 0 ID=LTnewLM_130019000.1:CDS:1;Parent=LTnewLM_130019000.1 ### LTnewLM_13 . polypeptide 491387 491686 . - . ID=LTnewLM_130019000.1:pep;Derives_from=LTnewLM_130019000.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 492823 493563 1 - . ID=LTnewLM_130019100 LTnewLM_13 AUGUSTUS mRNA 492823 493563 1 - . ID=LTnewLM_130019100.1;Parent=LTnewLM_130019100 LTnewLM_13 AUGUSTUS CDS 492823 493563 1 - 0 ID=LTnewLM_130019100.1:CDS:1;Parent=LTnewLM_130019100.1 ### LTnewLM_13 . polypeptide 492823 493563 . - . ID=LTnewLM_130019100.1:pep;Derives_from=LTnewLM_130019100.1;orthologous_to=LmjF.13.1420_mRNA;ortholog_cluster=OG0001034;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 495124 495357 0.88 - . ID=LTnewLM_130019200 LTnewLM_13 AUGUSTUS mRNA 495124 495357 0.88 - . ID=LTnewLM_130019200.1;Parent=LTnewLM_130019200 LTnewLM_13 AUGUSTUS CDS 495124 495357 0.88 - 0 ID=LTnewLM_130019200.1:CDS:1;Parent=LTnewLM_130019200.1 ### LTnewLM_13 . polypeptide 495124 495357 . - . ID=LTnewLM_130019200.1:pep;Derives_from=LTnewLM_130019200.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 496691 498568 1 - . ID=LTnewLM_130019300 LTnewLM_13 AUGUSTUS mRNA 496691 498568 1 - . ID=LTnewLM_130019300.1;Parent=LTnewLM_130019300 LTnewLM_13 AUGUSTUS CDS 496691 498568 1 - 0 ID=LTnewLM_130019300.1:CDS:1;Parent=LTnewLM_130019300.1 ### LTnewLM_13 . polypeptide 496691 498568 . - . ID=LTnewLM_130019300.1:pep;Derives_from=LTnewLM_130019300.1;orthologous_to=LmjF.13.1430_mRNA;ortholog_cluster=OG0001035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 499131 503897 1 - . ID=LTnewLM_130019400 LTnewLM_13 AUGUSTUS mRNA 499131 503897 1 - . ID=LTnewLM_130019400.1;Parent=LTnewLM_130019400 LTnewLM_13 AUGUSTUS CDS 499131 503897 1 - 0 ID=LTnewLM_130019400.1:CDS:1;Parent=LTnewLM_130019400.1 ### LTnewLM_13 . polypeptide 499131 503897 . - . ID=LTnewLM_130019400.1:pep;Derives_from=LTnewLM_130019400.1;orthologous_to=LmjF.13.1440_mRNA;ortholog_cluster=OG0001036;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 504808 505442 0.6 - . ID=LTnewLM_130019500 LTnewLM_13 AUGUSTUS mRNA 504808 505442 0.6 - . ID=LTnewLM_130019500.1;Parent=LTnewLM_130019500 LTnewLM_13 AUGUSTUS CDS 504808 505291 0.93 - 1 ID=LTnewLM_130019500.1:CDS:1;Parent=LTnewLM_130019500.1 LTnewLM_13 AUGUSTUS CDS 505378 505442 0.66 - 0 ID=LTnewLM_130019500.1:CDS:2;Parent=LTnewLM_130019500.1 ### LTnewLM_13 . polypeptide 504808 505442 . - . ID=LTnewLM_130019500.1:pep;Derives_from=LTnewLM_130019500.1;orthologous_to=LmjF.13.1450_mRNA;ortholog_cluster=OG0001037;product=term%3DEF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13202|Pfam:PF13499;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 505011 505115 . - . Parent=LTnewLM_130019500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 505011 505187 . - . Parent=LTnewLM_130019500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 505212 505265 . - . Parent=LTnewLM_130019500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 505215 505352 . - . Parent=LTnewLM_130019500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_13 AUGUSTUS gene 506740 507444 1 - . ID=LTnewLM_130019600 LTnewLM_13 AUGUSTUS mRNA 506740 507444 1 - . ID=LTnewLM_130019600.1;Parent=LTnewLM_130019600 LTnewLM_13 AUGUSTUS CDS 506740 507444 1 - 0 ID=LTnewLM_130019600.1:CDS:1;Parent=LTnewLM_130019600.1 ### LTnewLM_13 . polypeptide 506740 507444 . - . ID=LTnewLM_130019600.1:pep;Derives_from=LTnewLM_130019600.1;orthologous_to=LmjF.13.1460_mRNA;ortholog_cluster=OG0001038;product=term%3DEF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13499|Pfam:PF13202;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 506857 506997 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 506857 507030 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 507055 507114 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 507058 507237 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_13 Pfam protein_match 507166 507225 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_13 Pfam protein_match 507175 507240 . - . Parent=LTnewLM_130019600.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_13 AUGUSTUS gene 508399 525315 0.72 - . ID=LTnewLM_130019700 LTnewLM_13 AUGUSTUS mRNA 508399 525315 0.72 - . ID=LTnewLM_130019700.1;Parent=LTnewLM_130019700 LTnewLM_13 AUGUSTUS CDS 508399 518780 0.72 - 2 ID=LTnewLM_130019700.1:CDS:1;Parent=LTnewLM_130019700.1 LTnewLM_13 AUGUSTUS CDS 518838 525315 0.72 - 0 ID=LTnewLM_130019700.1:CDS:2;Parent=LTnewLM_130019700.1 ### LTnewLM_13 . polypeptide 508399 525315 . - . ID=LTnewLM_130019700.1:pep;Derives_from=LTnewLM_130019700.1;orthologous_to=LmjF.13.1470_mRNA;ortholog_cluster=OG0001039;product=term%3DSPRY domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00622|Pfam:PF00632;Ontology_term=GO:0004842,GO:0005515 LTnewLM_13 Pfam protein_match 508585 509997 . - . Parent=LTnewLM_130019700.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 LTnewLM_13 Pfam protein_match 511138 511524 . - . Parent=LTnewLM_130019700.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_13 Pfam protein_match 511885 512349 . - . Parent=LTnewLM_130019700.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 ### LTnewLM_13 AUGUSTUS gene 528752 529228 1 - . ID=LTnewLM_130019800 LTnewLM_13 AUGUSTUS mRNA 528752 529228 1 - . ID=LTnewLM_130019800.1;Parent=LTnewLM_130019800 LTnewLM_13 AUGUSTUS CDS 528752 529228 1 - 0 ID=LTnewLM_130019800.1:CDS:1;Parent=LTnewLM_130019800.1 ### LTnewLM_13 . polypeptide 528752 529228 . - . ID=LTnewLM_130019800.1:pep;Derives_from=LTnewLM_130019800.1;orthologous_to=LmjF.13.1480_mRNA;ortholog_cluster=OG0001040;product=term%3DRanBP1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00638;Ontology_term=GO:0046907 LTnewLM_13 Pfam protein_match 528794 529138 . - . Parent=LTnewLM_130019800.1:pep;Name=PF00638;signature_desc=RanBP1 domain;Ontology_term=GO:0046907 ### LTnewLM_13 AUGUSTUS gene 530071 532386 1 - . ID=LTnewLM_130019900 LTnewLM_13 AUGUSTUS mRNA 530071 532386 1 - . ID=LTnewLM_130019900.1;Parent=LTnewLM_130019900 LTnewLM_13 AUGUSTUS CDS 530071 532386 1 - 0 ID=LTnewLM_130019900.1:CDS:1;Parent=LTnewLM_130019900.1 ### LTnewLM_13 . polypeptide 530071 532386 . - . ID=LTnewLM_130019900.1:pep;Derives_from=LTnewLM_130019900.1;orthologous_to=LmjF.13.1490_mRNA;ortholog_cluster=OG0001041;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 533754 536987 . - . ID=LTnewLM_130020000:pseudogene;coverage=0.998;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.1500_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 533754 536987 . - . ID=LTnewLM_130020000.1;Parent=LTnewLM_130020000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 533754 536987 . - . ID=LTnewLM_130020000.1:pseudogenic_exon:1;Parent=LTnewLM_130020000.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 533754 536987 . - . ID=LTnewLM_130020000.1:pep;Derives_from=LTnewLM_130020000.1;orthologous_to=LmjF.13.1500_mRNA;ortholog_cluster=OG0007449;product=term%3DPIN domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13638 LTnewLM_13 Pfam protein_match 533922 534359 . - . Parent=LTnewLM_130020000.1:pep;Name=PF13638;signature_desc=PIN domain ### LTnewLM_13 AUGUSTUS gene 542664 544748 1 - . ID=LTnewLM_130020100 LTnewLM_13 AUGUSTUS mRNA 542664 544748 1 - . ID=LTnewLM_130020100.1;Parent=LTnewLM_130020100 LTnewLM_13 AUGUSTUS CDS 542664 544748 1 - 0 ID=LTnewLM_130020100.1:CDS:1;Parent=LTnewLM_130020100.1 ### LTnewLM_13 . polypeptide 542664 544748 . - . ID=LTnewLM_130020100.1:pep;Derives_from=LTnewLM_130020100.1;orthologous_to=LmjF.13.1510_mRNA;ortholog_cluster=OG0001042;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_13 Pfam protein_match 542883 543515 . - . Parent=LTnewLM_130020100.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_13 AUGUSTUS gene 546368 546769 1 - . ID=LTnewLM_130020200 LTnewLM_13 AUGUSTUS mRNA 546368 546769 1 - . ID=LTnewLM_130020200.1;Parent=LTnewLM_130020200 LTnewLM_13 AUGUSTUS CDS 546368 546769 1 - 0 ID=LTnewLM_130020200.1:CDS:1;Parent=LTnewLM_130020200.1 ### LTnewLM_13 . polypeptide 546368 546769 . - . ID=LTnewLM_130020200.1:pep;Derives_from=LTnewLM_130020200.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 547866 550703 1 - . ID=LTnewLM_130020300 LTnewLM_13 AUGUSTUS mRNA 547866 550703 1 - . ID=LTnewLM_130020300.1;Parent=LTnewLM_130020300 LTnewLM_13 AUGUSTUS CDS 547866 550703 1 - 0 ID=LTnewLM_130020300.1:CDS:1;Parent=LTnewLM_130020300.1 ### LTnewLM_13 . polypeptide 547866 550703 . - . ID=LTnewLM_130020300.1:pep;Derives_from=LTnewLM_130020300.1;orthologous_to=LmjF.13.1520_mRNA;ortholog_cluster=OG0001043;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_13 Pfam protein_match 548274 548654 . - . Parent=LTnewLM_130020300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_13 AUGUSTUS gene 553775 557068 1 - . ID=LTnewLM_130020400 LTnewLM_13 AUGUSTUS mRNA 553775 557068 1 - . ID=LTnewLM_130020400.1;Parent=LTnewLM_130020400 LTnewLM_13 AUGUSTUS CDS 553775 557068 1 - 0 ID=LTnewLM_130020400.1:CDS:1;Parent=LTnewLM_130020400.1 ### LTnewLM_13 . polypeptide 553775 557068 . - . ID=LTnewLM_130020400.1:pep;Derives_from=LTnewLM_130020400.1;orthologous_to=LmjF.13.1530_mRNA;ortholog_cluster=OG0001044;product=term%3DPhospholipid-translocating ATPase N-terminal/E1-E2 ATPase/Cation transport ATPase (P-type)/Phospholipid-translocating P-type ATPase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16209|Pfam:PF00122|Pfam:PF13246|Pfam:PF16212;Ontology_term=GO:0000166,GO:0046872 LTnewLM_13 Pfam protein_match 553832 554578 . - . Parent=LTnewLM_130020400.1:pep;Name=PF16212;signature_desc=Phospholipid-translocating P-type ATPase C-terminal LTnewLM_13 Pfam protein_match 555362 555652 . - . Parent=LTnewLM_130020400.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_13 Pfam protein_match 555956 556648 . - . Parent=LTnewLM_130020400.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_13 Pfam protein_match 556748 556945 . - . Parent=LTnewLM_130020400.1:pep;Name=PF16209;signature_desc=Phospholipid-translocating ATPase N-terminal ### LTnewLM_13 AUGUSTUS gene 558976 560439 1 - . ID=LTnewLM_130020500 LTnewLM_13 AUGUSTUS mRNA 558976 560439 1 - . ID=LTnewLM_130020500.1;Parent=LTnewLM_130020500 LTnewLM_13 AUGUSTUS CDS 558976 560439 1 - 0 ID=LTnewLM_130020500.1:CDS:1;Parent=LTnewLM_130020500.1 ### LTnewLM_13 . polypeptide 558976 560439 . - . ID=LTnewLM_130020500.1:pep;Derives_from=LTnewLM_130020500.1;orthologous_to=LmjF.13.1540_mRNA;ortholog_cluster=OG0001045;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 562335 565880 1 - . ID=LTnewLM_130020600 LTnewLM_13 AUGUSTUS mRNA 562335 565880 1 - . ID=LTnewLM_130020600.1;Parent=LTnewLM_130020600 LTnewLM_13 AUGUSTUS CDS 562335 565880 1 - 0 ID=LTnewLM_130020600.1:CDS:1;Parent=LTnewLM_130020600.1 ### LTnewLM_13 . polypeptide 562335 565880 . - . ID=LTnewLM_130020600.1:pep;Derives_from=LTnewLM_130020600.1;orthologous_to=LmjF.13.1550_mRNA;ortholog_cluster=OG0001046;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 . pseudogene 567029 568125 . - . ID=LTnewLM_130020700:pseudogene;coverage=0.999;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.1560_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 567029 568125 . - . ID=LTnewLM_130020700.1;Parent=LTnewLM_130020700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 567029 568125 . - . ID=LTnewLM_130020700.1:pseudogenic_exon:1;Parent=LTnewLM_130020700.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 567029 568125 . - . ID=LTnewLM_130020700.1:pep;Derives_from=LTnewLM_130020700.1;product=term%3Dhypothetical protein ### LTnewLM_13 AUGUSTUS gene 569562 571325 1 - . ID=LTnewLM_130020800 LTnewLM_13 AUGUSTUS mRNA 569562 571325 1 - . ID=LTnewLM_130020800.1;Parent=LTnewLM_130020800 LTnewLM_13 AUGUSTUS CDS 569562 571325 1 - 0 ID=LTnewLM_130020800.1:CDS:1;Parent=LTnewLM_130020800.1 ### LTnewLM_13 . polypeptide 569562 571325 . - . ID=LTnewLM_130020800.1:pep;Derives_from=LTnewLM_130020800.1;orthologous_to=LmjF.13.1570_mRNA;ortholog_cluster=OG0001047;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_13 Pfam protein_match 569778 570410 . - . Parent=LTnewLM_130020800.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_13 AUGUSTUS gene 579664 580080 1 - . ID=LTnewLM_130020900 LTnewLM_13 AUGUSTUS mRNA 579664 580080 1 - . ID=LTnewLM_130020900.1;Parent=LTnewLM_130020900 LTnewLM_13 AUGUSTUS CDS 579664 580080 1 - 0 ID=LTnewLM_130020900.1:CDS:1;Parent=LTnewLM_130020900.1 ### LTnewLM_13 . polypeptide 579664 580080 . - . ID=LTnewLM_130020900.1:pep;Derives_from=LTnewLM_130020900.1;orthologous_to=LmjF.13.1580_mRNA;ortholog_cluster=OG0001048;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_13 Pfam protein_match 579694 580053 . - . Parent=LTnewLM_130020900.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_13 AUGUSTUS gene 582711 584963 1 - . ID=LTnewLM_130021000 LTnewLM_13 AUGUSTUS mRNA 582711 584963 1 - . ID=LTnewLM_130021000.1;Parent=LTnewLM_130021000 LTnewLM_13 AUGUSTUS CDS 582711 584963 1 - 0 ID=LTnewLM_130021000.1:CDS:1;Parent=LTnewLM_130021000.1 ### LTnewLM_13 . polypeptide 582711 584963 . - . ID=LTnewLM_130021000.1:pep;Derives_from=LTnewLM_130021000.1;orthologous_to=LmjF.13.1590_mRNA;ortholog_cluster=OG0001049;product=term%3DT-complex protein 10 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07202 LTnewLM_13 Pfam protein_match 582945 583037 . - . Parent=LTnewLM_130021000.1:pep;Name=PF07202;signature_desc=T-complex protein 10 C-terminus ### LTnewLM_13 Liftoff gene 586414 590316 . - . ID=LTnewLM_130021100;coverage=0.990;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.13.1600_0 LTnewLM_13 Liftoff mRNA 586414 590316 . - . ID=LTnewLM_130021100.1;Parent=LTnewLM_130021100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_13 Liftoff CDS 586414 590316 . - 0 ID=LTnewLM_130021100.1:CDS:1;Parent=LTnewLM_130021100.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 586414 590316 . - . ID=LTnewLM_130021100.1:pep;Derives_from=LTnewLM_130021100.1;orthologous_to=LmjF.13.1600_mRNA;ortholog_cluster=OG0001050;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_13 AUGUSTUS gene 593657 595843 1 - . ID=LTnewLM_130021200 LTnewLM_13 AUGUSTUS mRNA 593657 595843 1 - . ID=LTnewLM_130021200.1;Parent=LTnewLM_130021200 LTnewLM_13 AUGUSTUS CDS 593657 595843 1 - 0 ID=LTnewLM_130021200.1:CDS:1;Parent=LTnewLM_130021200.1 ### LTnewLM_13 . polypeptide 593657 595843 . - . ID=LTnewLM_130021200.1:pep;Derives_from=LTnewLM_130021200.1;orthologous_to=LmjF.13.1610_mRNA;ortholog_cluster=OG0001051;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_13 Pfam protein_match 594299 595237 . - . Parent=LTnewLM_130021200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_13 Pfam protein_match 594821 595132 . - . Parent=LTnewLM_130021200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_13 AUGUSTUS gene 597753 599462 1 - . ID=LTnewLM_130021300 LTnewLM_13 AUGUSTUS mRNA 597753 599462 1 - . ID=LTnewLM_130021300.1;Parent=LTnewLM_130021300 LTnewLM_13 AUGUSTUS CDS 597753 599462 1 - 0 ID=LTnewLM_130021300.1:CDS:1;Parent=LTnewLM_130021300.1 ### LTnewLM_13 . polypeptide 597753 599462 . - . ID=LTnewLM_130021300.1:pep;Derives_from=LTnewLM_130021300.1;orthologous_to=LmjF.13.1620_mRNA;ortholog_cluster=OG0001052;product=term%3DFAD binding domain/Squalene epoxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01494|Pfam:PF08491;Ontology_term=GO:0004506,GO:0055114,GO:0050660,GO:0016021 LTnewLM_13 Pfam protein_match 598023 598835 . - . Parent=LTnewLM_130021300.1:pep;Name=PF08491;signature_desc=Squalene epoxidase;Ontology_term=GO:0004506,GO:0050660,GO:0055114,GO:0016021 LTnewLM_13 Pfam protein_match 598347 599357 . - . Parent=LTnewLM_130021300.1:pep;Name=PF01494;signature_desc=FAD binding domain ### LTnewLM_13 AUGUSTUS gene 601594 606540 1 - . ID=LTnewLM_130021400 LTnewLM_13 AUGUSTUS mRNA 601594 606540 1 - . ID=LTnewLM_130021400.1;Parent=LTnewLM_130021400 LTnewLM_13 AUGUSTUS CDS 601594 606540 1 - 0 ID=LTnewLM_130021400.1:CDS:1;Parent=LTnewLM_130021400.1 ### LTnewLM_13 . polypeptide 601594 606540 . - . ID=LTnewLM_130021400.1:pep;Derives_from=LTnewLM_130021400.1;orthologous_to=LmjF.13.1630_mRNA;ortholog_cluster=OG0001053;product=term%3DDNA polymerase family A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00476;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_13 Pfam protein_match 601639 602850 . - . Parent=LTnewLM_130021400.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_13 . pseudogene 607679 609499 . - . ID=LTnewLM_130021500:pseudogene;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.13.1640_0;has_internal_stop=true LTnewLM_13 . pseudogenic_transcript 607679 609499 . - . ID=LTnewLM_130021500.1;Parent=LTnewLM_130021500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_13 . pseudogenic_exon 607679 609499 . - . ID=LTnewLM_130021500.1:pseudogenic_exon:1;Parent=LTnewLM_130021500.1;extra_copy_number=0 ### LTnewLM_13 . polypeptide 607679 609499 . - . ID=LTnewLM_130021500.1:pep;Derives_from=LTnewLM_130021500.1;orthologous_to=LmjF.13.1640_mRNA;ortholog_cluster=OG0007450;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_13 Pfam protein_match 608039 608518 . - . Parent=LTnewLM_130021500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_13 Pfam protein_match 608672 609061 . - . Parent=LTnewLM_130021500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_13 Pfam protein_match 608672 609064 . - . Parent=LTnewLM_130021500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_13 AUGUSTUS gene 611194 625191 1 - . ID=LTnewLM_130021600 LTnewLM_13 AUGUSTUS mRNA 611194 625191 1 - . ID=LTnewLM_130021600.1;Parent=LTnewLM_130021600 LTnewLM_13 AUGUSTUS CDS 611194 625191 1 - 0 ID=LTnewLM_130021600.1:CDS:1;Parent=LTnewLM_130021600.1 ### LTnewLM_13 . polypeptide 611194 625191 . - . ID=LTnewLM_130021600.1:pep;Derives_from=LTnewLM_130021600.1;orthologous_to=LmjF.13.1650_mRNA;ortholog_cluster=OG0001054;product=term%3DDynein heavy chain%2C N-terminal region 1/Dynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08385|Pfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_13 Pfam protein_match 611212 612090 . - . Parent=LTnewLM_130021600.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain LTnewLM_13 Pfam protein_match 612112 612519 . - . Parent=LTnewLM_130021600.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_13 Pfam protein_match 612997 613248 . - . Parent=LTnewLM_130021600.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_13 Pfam protein_match 613999 614658 . - . Parent=LTnewLM_130021600.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_13 Pfam protein_match 614740 615771 . - . Parent=LTnewLM_130021600.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_13 Pfam protein_match 615811 616593 . - . Parent=LTnewLM_130021600.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_13 Pfam protein_match 616747 617025 . - . Parent=LTnewLM_130021600.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_13 Pfam protein_match 617125 617661 . - . Parent=LTnewLM_130021600.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_13 Pfam protein_match 617155 617559 . - . Parent=LTnewLM_130021600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_13 Pfam protein_match 617677 618072 . - . Parent=LTnewLM_130021600.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_13 Pfam protein_match 618169 618588 . - . Parent=LTnewLM_130021600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_13 Pfam protein_match 618556 619536 . - . Parent=LTnewLM_130021600.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_13 Pfam protein_match 619939 621195 . - . Parent=LTnewLM_130021600.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_13 Pfam protein_match 622888 624615 . - . Parent=LTnewLM_130021600.1:pep;Name=PF08385;signature_desc=Dynein heavy chain%2C N-terminal region 1 ### LTnewLM_13 AUGUSTUS gene 626292 627908 1 - . ID=LTnewLM_130021700 LTnewLM_13 AUGUSTUS mRNA 626292 627908 1 - . ID=LTnewLM_130021700.1;Parent=LTnewLM_130021700 LTnewLM_13 AUGUSTUS CDS 626292 627908 1 - 0 ID=LTnewLM_130021700.1:CDS:1;Parent=LTnewLM_130021700.1 ### LTnewLM_13 . polypeptide 626292 627908 . - . ID=LTnewLM_130021700.1:pep;Derives_from=LTnewLM_130021700.1;orthologous_to=LmjF.13.1660_mRNA;ortholog_cluster=OG0001055;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_13 Pfam protein_match 626319 627821 . - . Parent=LTnewLM_130021700.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_13 AUGUSTUS gene 628401 628721 1 - . ID=LTnewLM_130021800 LTnewLM_13 AUGUSTUS mRNA 628401 628721 1 - . ID=LTnewLM_130021800.1;Parent=LTnewLM_130021800 LTnewLM_13 AUGUSTUS CDS 628401 628721 1 - 0 ID=LTnewLM_130021800.1:CDS:1;Parent=LTnewLM_130021800.1 ### LTnewLM_13 . polypeptide 628401 628721 . - . ID=LTnewLM_130021800.1:pep;Derives_from=LTnewLM_130021800.1;orthologous_to=LTnewLM_330042500.1,LmjF.13.1670_mRNA,LmjF.33.3230_mRNA;ortholog_cluster=OG0000118;product=term%3DRibosomal protein L44%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00935;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_13 Pfam protein_match 628446 628664 . - . Parent=LTnewLM_130021800.1:pep;Name=PF00935;signature_desc=Ribosomal protein L44;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_13 AUGUSTUS gene 629449 630267 1 - . ID=LTnewLM_130021900 LTnewLM_13 AUGUSTUS mRNA 629449 630267 1 - . ID=LTnewLM_130021900.1;Parent=LTnewLM_130021900 LTnewLM_13 AUGUSTUS CDS 629449 630267 1 - 0 ID=LTnewLM_130021900.1:CDS:1;Parent=LTnewLM_130021900.1 ### LTnewLM_13 . polypeptide 629449 630267 . - . ID=LTnewLM_130021900.1:pep;Derives_from=LTnewLM_130021900.1;orthologous_to=LmjF.13.1680_mRNA;ortholog_cluster=OG0001056;product=term%3DNADP oxidoreductase coenzyme F420-dependent/NAD binding domain of 6-phosphogluconate dehydrogenase/Pyrroline-5-carboxylate reductase dimerisation%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03807|Pfam:PF03446|Pfam:PF14748;Ontology_term=GO:0055114,GO:0004616,GO:0006098 LTnewLM_13 Pfam protein_match 629476 629784 . - . Parent=LTnewLM_130021900.1:pep;Name=PF14748;signature_desc=Pyrroline-5-carboxylate reductase dimerisation LTnewLM_13 Pfam protein_match 629947 630255 . - . Parent=LTnewLM_130021900.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 LTnewLM_13 Pfam protein_match 629974 630255 . - . Parent=LTnewLM_130021900.1:pep;Name=PF03807;signature_desc=NADP oxidoreductase coenzyme F420-dependent ### LTnewLM_13 AUGUSTUS gene 632119 633942 1 + . ID=LTnewLM_130022000 LTnewLM_13 AUGUSTUS mRNA 632119 633942 1 + . ID=LTnewLM_130022000.1;Parent=LTnewLM_130022000 LTnewLM_13 AUGUSTUS CDS 632119 633942 1 + 0 ID=LTnewLM_130022000.1:CDS:1;Parent=LTnewLM_130022000.1 ### LTnewLM_13 . polypeptide 632119 633942 . + . ID=LTnewLM_130022000.1:pep;Derives_from=LTnewLM_130022000.1;orthologous_to=LmjF.13.1690_mRNA;ortholog_cluster=OG0001057;product=term%3DMajor Facilitator Superfamily/Nodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF06813;Ontology_term=GO:0016021,GO:0055085 LTnewLM_13 Pfam protein_match 632224 633000 . + . Parent=LTnewLM_130022000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_13 Pfam protein_match 632251 632742 . + . Parent=LTnewLM_130022000.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_13 AUGUSTUS gene 635618 636991 1 + . ID=LTnewLM_130022100 LTnewLM_13 AUGUSTUS mRNA 635618 636991 1 + . ID=LTnewLM_130022100.1;Parent=LTnewLM_130022100 LTnewLM_13 AUGUSTUS CDS 635618 636991 1 + 0 ID=LTnewLM_130022100.1:CDS:1;Parent=LTnewLM_130022100.1 ### LTnewLM_13 . polypeptide 635618 636991 . + . ID=LTnewLM_130022100.1:pep;Derives_from=LTnewLM_130022100.1;orthologous_to=LmjF.13.1700_mRNA,LmjF.29.2880_mRNA;ortholog_cluster=OG0000326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . contig 1 656244 . + . Name=LTnewLM_CTG000013 LTnewLM_14 AUGUSTUS gene 684 1504 0.5 + . ID=LTnewLM_140005000 LTnewLM_14 AUGUSTUS mRNA 684 1504 0.5 + . ID=LTnewLM_140005000.1;Parent=LTnewLM_140005000 LTnewLM_14 AUGUSTUS CDS 684 1321 0.51 + 0 ID=LTnewLM_140005000.1:CDS:1;Parent=LTnewLM_140005000.1 LTnewLM_14 AUGUSTUS CDS 1369 1504 0.56 + 1 ID=LTnewLM_140005000.1:CDS:2;Parent=LTnewLM_140005000.1 ### LTnewLM_14 . polypeptide 684 1504 . + . ID=LTnewLM_140005000.1:pep;Derives_from=LTnewLM_140005000.1;orthologous_to=LTnewLM_230021500.1,LmjF.23.1200_mRNA;ortholog_cluster=OG0000327;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 4866 5789 1 + . ID=LTnewLM_140005100 LTnewLM_14 AUGUSTUS mRNA 4866 5789 1 + . ID=LTnewLM_140005100.1;Parent=LTnewLM_140005100 LTnewLM_14 AUGUSTUS CDS 4866 5789 1 + 0 ID=LTnewLM_140005100.1:CDS:1;Parent=LTnewLM_140005100.1 ### LTnewLM_14 . polypeptide 4866 5789 . + . ID=LTnewLM_140005100.1:pep;Derives_from=LTnewLM_140005100.1;orthologous_to=LmjF.14.0010_mRNA;ortholog_cluster=OG0001058;product=term%3DKH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15985 LTnewLM_14 Pfam protein_match 5382 5498 . + . Parent=LTnewLM_140005100.1:pep;Name=PF15985;signature_desc=KH domain ### LTnewLM_14 AUGUSTUS gene 6250 9393 1 + . ID=LTnewLM_140005200 LTnewLM_14 AUGUSTUS mRNA 6250 9393 1 + . ID=LTnewLM_140005200.1;Parent=LTnewLM_140005200 LTnewLM_14 AUGUSTUS CDS 6250 9393 1 + 0 ID=LTnewLM_140005200.1:CDS:1;Parent=LTnewLM_140005200.1 ### LTnewLM_14 . polypeptide 6250 9393 . + . ID=LTnewLM_140005200.1:pep;Derives_from=LTnewLM_140005200.1;orthologous_to=LTnewLM_340042400.1,LmjF.34.3590_mRNA;ortholog_cluster=OG0000328;product=term%3DPI3-kinase family%2C ras-binding domain/Phosphoinositide 3-kinase C2/Phosphoinositide 3-kinase family%2C accessory domain (PIK domain)/Phosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00794|Pfam:PF00792|Pfam:PF00613|Pfam:PF00454;Ontology_term=GO:0016773 LTnewLM_14 Pfam protein_match 6784 6999 . + . Parent=LTnewLM_140005200.1:pep;Name=PF00794;signature_desc=PI3-kinase family%2C ras-binding domain LTnewLM_14 Pfam protein_match 7294 7668 . + . Parent=LTnewLM_140005200.1:pep;Name=PF00792;signature_desc=Phosphoinositide 3-kinase C2 LTnewLM_14 Pfam protein_match 7822 8334 . + . Parent=LTnewLM_140005200.1:pep;Name=PF00613;signature_desc=Phosphoinositide 3-kinase family%2C accessory domain (PIK domain) LTnewLM_14 Pfam protein_match 8611 9240 . + . Parent=LTnewLM_140005200.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_14 AUGUSTUS gene 9900 10712 1 + . ID=LTnewLM_140005300 LTnewLM_14 AUGUSTUS mRNA 9900 10712 1 + . ID=LTnewLM_140005300.1;Parent=LTnewLM_140005300 LTnewLM_14 AUGUSTUS CDS 9900 10712 1 + 0 ID=LTnewLM_140005300.1:CDS:1;Parent=LTnewLM_140005300.1 ### LTnewLM_14 . polypeptide 9900 10712 . + . ID=LTnewLM_140005300.1:pep;Derives_from=LTnewLM_140005300.1;orthologous_to=LmjF.14.0030_mRNA;ortholog_cluster=OG0001059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 11359 14655 1 + . ID=LTnewLM_140005400 LTnewLM_14 AUGUSTUS mRNA 11359 14655 1 + . ID=LTnewLM_140005400.1;Parent=LTnewLM_140005400 LTnewLM_14 AUGUSTUS CDS 11359 14655 1 + 0 ID=LTnewLM_140005400.1:CDS:1;Parent=LTnewLM_140005400.1 ### LTnewLM_14 . polypeptide 11359 14655 . + . ID=LTnewLM_140005400.1:pep;Derives_from=LTnewLM_140005400.1;orthologous_to=LmjF.14.0040_mRNA;ortholog_cluster=OG0001060;product=term%3DOxygenase domain of the 2OGFeDO superfamily/Type III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12851|Pfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_14 Pfam protein_match 12355 12690 . + . Parent=LTnewLM_140005400.1:pep;Name=PF12851;signature_desc=Oxygenase domain of the 2OGFeDO superfamily LTnewLM_14 Pfam protein_match 12988 13491 . + . Parent=LTnewLM_140005400.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_14 Pfam protein_match 13024 13776 . + . Parent=LTnewLM_140005400.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_14 Pfam protein_match 14038 14370 . + . Parent=LTnewLM_140005400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_14 AUGUSTUS gene 15923 18124 1 + . ID=LTnewLM_140005500 LTnewLM_14 AUGUSTUS mRNA 15923 18124 1 + . ID=LTnewLM_140005500.1;Parent=LTnewLM_140005500 LTnewLM_14 AUGUSTUS CDS 15923 18124 1 + 0 ID=LTnewLM_140005500.1:CDS:1;Parent=LTnewLM_140005500.1 ### LTnewLM_14 . polypeptide 15923 18124 . + . ID=LTnewLM_140005500.1:pep;Derives_from=LTnewLM_140005500.1;orthologous_to=LmjF.14.0050_mRNA;ortholog_cluster=OG0001061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 18674 19249 1 + . ID=LTnewLM_140005600 LTnewLM_14 AUGUSTUS mRNA 18674 19249 1 + . ID=LTnewLM_140005600.1;Parent=LTnewLM_140005600 LTnewLM_14 AUGUSTUS CDS 18674 19249 1 + 0 ID=LTnewLM_140005600.1:CDS:1;Parent=LTnewLM_140005600.1 ### LTnewLM_14 . polypeptide 18674 19249 . + . ID=LTnewLM_140005600.1:pep;Derives_from=LTnewLM_140005600.1;orthologous_to=LmjF.14.0060_mRNA;ortholog_cluster=OG0001062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 19918 20757 1 + . ID=LTnewLM_140005700 LTnewLM_14 AUGUSTUS mRNA 19918 20757 1 + . ID=LTnewLM_140005700.1;Parent=LTnewLM_140005700 LTnewLM_14 AUGUSTUS CDS 19918 20757 1 + 0 ID=LTnewLM_140005700.1:CDS:1;Parent=LTnewLM_140005700.1 ### LTnewLM_14 . polypeptide 19918 20757 . + . ID=LTnewLM_140005700.1:pep;Derives_from=LTnewLM_140005700.1;orthologous_to=LmjF.14.0070_mRNA;ortholog_cluster=OG0001063;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_14 Pfam protein_match 20317 20670 . + . Parent=LTnewLM_140005700.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_14 AUGUSTUS gene 21764 22627 1 + . ID=LTnewLM_140005800 LTnewLM_14 AUGUSTUS mRNA 21764 22627 1 + . ID=LTnewLM_140005800.1;Parent=LTnewLM_140005800 LTnewLM_14 AUGUSTUS CDS 21764 22627 1 + 0 ID=LTnewLM_140005800.1:CDS:1;Parent=LTnewLM_140005800.1 ### LTnewLM_14 . polypeptide 21764 22627 . + . ID=LTnewLM_140005800.1:pep;Derives_from=LTnewLM_140005800.1;orthologous_to=LmjF.14.0080_mRNA;ortholog_cluster=OG0001064;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 23244 24398 1 + . ID=LTnewLM_140005900 LTnewLM_14 AUGUSTUS mRNA 23244 24398 1 + . ID=LTnewLM_140005900.1;Parent=LTnewLM_140005900 LTnewLM_14 AUGUSTUS CDS 23244 24398 1 + 0 ID=LTnewLM_140005900.1:CDS:1;Parent=LTnewLM_140005900.1 ### LTnewLM_14 . polypeptide 23244 24398 . + . ID=LTnewLM_140005900.1:pep;Derives_from=LTnewLM_140005900.1;orthologous_to=LmjF.14.0090_mRNA;ortholog_cluster=OG0001065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 25571 28669 1 + . ID=LTnewLM_140006000 LTnewLM_14 AUGUSTUS mRNA 25571 28669 1 + . ID=LTnewLM_140006000.1;Parent=LTnewLM_140006000 LTnewLM_14 AUGUSTUS CDS 25571 28669 1 + 0 ID=LTnewLM_140006000.1:CDS:1;Parent=LTnewLM_140006000.1 ### LTnewLM_14 . polypeptide 25571 28669 . + . ID=LTnewLM_140006000.1:pep;Derives_from=LTnewLM_140006000.1;orthologous_to=LmjF.14.0100_mRNA;ortholog_cluster=OG0001066;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 29632 31203 1 + . ID=LTnewLM_140006100 LTnewLM_14 AUGUSTUS mRNA 29632 31203 1 + . ID=LTnewLM_140006100.1;Parent=LTnewLM_140006100 LTnewLM_14 AUGUSTUS CDS 29632 31203 1 + 0 ID=LTnewLM_140006100.1:CDS:1;Parent=LTnewLM_140006100.1 ### LTnewLM_14 . polypeptide 29632 31203 . + . ID=LTnewLM_140006100.1:pep;Derives_from=LTnewLM_140006100.1;orthologous_to=LmjF.14.0110_mRNA;ortholog_cluster=OG0001067;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_14 Pfam protein_match 30964 31161 . + . Parent=LTnewLM_140006100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_14 Liftoff gene 31980 33065 . + . ID=LTnewLM_140006200;coverage=0.988;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.0120_0 LTnewLM_14 Liftoff mRNA 31980 33065 . + . ID=LTnewLM_140006200.1;Parent=LTnewLM_140006200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 31980 33065 . + 0 ID=LTnewLM_140006200.1:CDS:1;Parent=LTnewLM_140006200.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 31980 33065 . + . ID=LTnewLM_140006200.1:pep;Derives_from=LTnewLM_140006200.1;orthologous_to=LmjF.14.0120_mRNA;ortholog_cluster=OG0001068;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 33946 35004 1 + . ID=LTnewLM_140006300 LTnewLM_14 AUGUSTUS mRNA 33946 35004 1 + . ID=LTnewLM_140006300.1;Parent=LTnewLM_140006300 LTnewLM_14 AUGUSTUS CDS 33946 35004 1 + 0 ID=LTnewLM_140006300.1:CDS:1;Parent=LTnewLM_140006300.1 ### LTnewLM_14 . polypeptide 33946 35004 . + . ID=LTnewLM_140006300.1:pep;Derives_from=LTnewLM_140006300.1;orthologous_to=LmjF.14.0130_mRNA;ortholog_cluster=OG0001069;product=term%3DInosine-uridine preferring nucleoside hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01156 LTnewLM_14 Pfam protein_match 33961 34968 . + . Parent=LTnewLM_140006300.1:pep;Name=PF01156;signature_desc=Inosine-uridine preferring nucleoside hydrolase ### LTnewLM_14 AUGUSTUS gene 37080 38657 1 + . ID=LTnewLM_140006400 LTnewLM_14 AUGUSTUS mRNA 37080 38657 1 + . ID=LTnewLM_140006400.1;Parent=LTnewLM_140006400 LTnewLM_14 AUGUSTUS CDS 37080 38657 1 + 0 ID=LTnewLM_140006400.1:CDS:1;Parent=LTnewLM_140006400.1 ### LTnewLM_14 . polypeptide 37080 38657 . + . ID=LTnewLM_140006400.1:pep;Derives_from=LTnewLM_140006400.1;orthologous_to=LmjF.14.0140_mRNA;ortholog_cluster=OG0001070;product=term%3DRNA binding activity-knot of a chromodomain/MOZ/SAS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11717|Pfam:PF01853;Ontology_term=GO:0016747,GO:0005634,GO:0006355 LTnewLM_14 Pfam protein_match 37110 37265 . + . Parent=LTnewLM_140006400.1:pep;Name=PF11717;signature_desc=RNA binding activity-knot of a chromodomain LTnewLM_14 Pfam protein_match 37914 38447 . + . Parent=LTnewLM_140006400.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 ### LTnewLM_14 AUGUSTUS gene 39660 40205 1 + . ID=LTnewLM_140006500 LTnewLM_14 AUGUSTUS mRNA 39660 40205 1 + . ID=LTnewLM_140006500.1;Parent=LTnewLM_140006500 LTnewLM_14 AUGUSTUS CDS 39660 40205 1 + 0 ID=LTnewLM_140006500.1:CDS:1;Parent=LTnewLM_140006500.1 ### LTnewLM_14 . polypeptide 39660 40205 . + . ID=LTnewLM_140006500.1:pep;Derives_from=LTnewLM_140006500.1;orthologous_to=LmjF.14.0150_mRNA;ortholog_cluster=OG0001071;product=term%3DRibosomal protein L7/L12 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00542;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_14 Pfam protein_match 39999 40196 . + . Parent=LTnewLM_140006500.1:pep;Name=PF00542;signature_desc=Ribosomal protein L7/L12 C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_14 AUGUSTUS gene 41004 42086 1 + . ID=LTnewLM_140006600 LTnewLM_14 AUGUSTUS mRNA 41004 42086 1 + . ID=LTnewLM_140006600.1;Parent=LTnewLM_140006600 LTnewLM_14 AUGUSTUS CDS 41004 42086 1 + 0 ID=LTnewLM_140006600.1:CDS:1;Parent=LTnewLM_140006600.1 ### LTnewLM_14 . polypeptide 41004 42086 . + . ID=LTnewLM_140006600.1:pep;Derives_from=LTnewLM_140006600.1;orthologous_to=LmjF.14.0160_mRNA;ortholog_cluster=OG0001072;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 45567 47624 1 + . ID=LTnewLM_140006700 LTnewLM_14 AUGUSTUS mRNA 45567 47624 1 + . ID=LTnewLM_140006700.1;Parent=LTnewLM_140006700 LTnewLM_14 AUGUSTUS CDS 45567 47624 1 + 0 ID=LTnewLM_140006700.1:CDS:1;Parent=LTnewLM_140006700.1 ### LTnewLM_14 . polypeptide 45567 47624 . + . ID=LTnewLM_140006700.1:pep;Derives_from=LTnewLM_140006700.1;orthologous_to=LmjF.14.0170_mRNA;ortholog_cluster=OG0001073;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 48704 50218 1 + . ID=LTnewLM_140006800 LTnewLM_14 AUGUSTUS mRNA 48704 50218 1 + . ID=LTnewLM_140006800.1;Parent=LTnewLM_140006800 LTnewLM_14 AUGUSTUS CDS 48704 50218 1 + 0 ID=LTnewLM_140006800.1:CDS:1;Parent=LTnewLM_140006800.1 ### LTnewLM_14 . polypeptide 48704 50218 . + . ID=LTnewLM_140006800.1:pep;Derives_from=LTnewLM_140006800.1;orthologous_to=LTnewLM_360075000.1,LmjF.14.0180_mRNA;ortholog_cluster=OG0000329;product=term%3DCarboxypeptidase Taq (M32) metallopeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02074;Ontology_term=GO:0006508,GO:0004181 LTnewLM_14 Pfam protein_match 48722 50197 . + . Parent=LTnewLM_140006800.1:pep;Name=PF02074;signature_desc=Carboxypeptidase Taq (M32) metallopeptidase;Ontology_term=GO:0004181,GO:0006508 ### LTnewLM_14 AUGUSTUS gene 51392 51991 1 + . ID=LTnewLM_140006900 LTnewLM_14 AUGUSTUS mRNA 51392 51991 1 + . ID=LTnewLM_140006900.1;Parent=LTnewLM_140006900 LTnewLM_14 AUGUSTUS CDS 51392 51991 1 + 0 ID=LTnewLM_140006900.1:CDS:1;Parent=LTnewLM_140006900.1 ### LTnewLM_14 . polypeptide 51392 51991 . + . ID=LTnewLM_140006900.1:pep;Derives_from=LTnewLM_140006900.1;orthologous_to=LmjF.14.0190_mRNA;ortholog_cluster=OG0001074;product=term%3DThioredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13905 LTnewLM_14 Pfam protein_match 51506 51808 . + . Parent=LTnewLM_140006900.1:pep;Name=PF13905;signature_desc=Thioredoxin-like ### LTnewLM_14 AUGUSTUS gene 53571 54092 1 + . ID=LTnewLM_140007000 LTnewLM_14 AUGUSTUS mRNA 53571 54092 1 + . ID=LTnewLM_140007000.1;Parent=LTnewLM_140007000 LTnewLM_14 AUGUSTUS CDS 53571 54092 1 + 0 ID=LTnewLM_140007000.1:CDS:1;Parent=LTnewLM_140007000.1 ### LTnewLM_14 . polypeptide 53571 54092 . + . ID=LTnewLM_140007000.1:pep;Derives_from=LTnewLM_140007000.1;orthologous_to=LmjF.14.0200_mRNA;ortholog_cluster=OG0001075;product=term%3DCilia BBSome complex subunit 10%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14777;Ontology_term=GO:0034464,GO:0042384 LTnewLM_14 Pfam protein_match 53574 53780 . + . Parent=LTnewLM_140007000.1:pep;Name=PF14777;signature_desc=Cilia BBSome complex subunit 10;Ontology_term=GO:0042384,GO:0034464 ### LTnewLM_14 AUGUSTUS gene 55887 57218 1 + . ID=LTnewLM_140007100 LTnewLM_14 AUGUSTUS mRNA 55887 57218 1 + . ID=LTnewLM_140007100.1;Parent=LTnewLM_140007100 LTnewLM_14 AUGUSTUS CDS 55887 57218 1 + 0 ID=LTnewLM_140007100.1:CDS:1;Parent=LTnewLM_140007100.1 ### LTnewLM_14 . polypeptide 55887 57218 . + . ID=LTnewLM_140007100.1:pep;Derives_from=LTnewLM_140007100.1;orthologous_to=LmjF.14.0210_mRNA;ortholog_cluster=OG0001076;product=term%3DDomain of unknown function (DUF4201)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13870 LTnewLM_14 Pfam protein_match 56721 57161 . + . Parent=LTnewLM_140007100.1:pep;Name=PF13870;signature_desc=Domain of unknown function (DUF4201) ### LTnewLM_14 AUGUSTUS gene 58715 60430 1 + . ID=LTnewLM_140007200 LTnewLM_14 AUGUSTUS mRNA 58715 60430 1 + . ID=LTnewLM_140007200.1;Parent=LTnewLM_140007200 LTnewLM_14 AUGUSTUS CDS 58715 60430 1 + 0 ID=LTnewLM_140007200.1:CDS:1;Parent=LTnewLM_140007200.1 ### LTnewLM_14 . polypeptide 58715 60430 . + . ID=LTnewLM_140007200.1:pep;Derives_from=LTnewLM_140007200.1;orthologous_to=LmjF.14.0220_mRNA;ortholog_cluster=OG0001077;product=term%3DPX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00787;Ontology_term=GO:0035091 LTnewLM_14 Pfam protein_match 59204 59449 . + . Parent=LTnewLM_140007200.1:pep;Name=PF00787;signature_desc=PX domain;Ontology_term=GO:0035091 ### LTnewLM_14 AUGUSTUS gene 62561 63009 0.81 + . ID=LTnewLM_140007300 LTnewLM_14 AUGUSTUS mRNA 62561 63009 0.81 + . ID=LTnewLM_140007300.1;Parent=LTnewLM_140007300 LTnewLM_14 AUGUSTUS CDS 62561 62622 0.81 + 0 ID=LTnewLM_140007300.1:CDS:1;Parent=LTnewLM_140007300.1 LTnewLM_14 AUGUSTUS CDS 62679 63009 0.95 + 1 ID=LTnewLM_140007300.1:CDS:2;Parent=LTnewLM_140007300.1 ### LTnewLM_14 . polypeptide 62561 63009 . + . ID=LTnewLM_140007300.1:pep;Derives_from=LTnewLM_140007300.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 64708 70230 1 + . ID=LTnewLM_140007400 LTnewLM_14 AUGUSTUS mRNA 64708 70230 1 + . ID=LTnewLM_140007400.1;Parent=LTnewLM_140007400 LTnewLM_14 AUGUSTUS CDS 64708 70230 1 + 0 ID=LTnewLM_140007400.1:CDS:1;Parent=LTnewLM_140007400.1 ### LTnewLM_14 . polypeptide 64708 70230 . + . ID=LTnewLM_140007400.1:pep;Derives_from=LTnewLM_140007400.1;orthologous_to=LmjF.14.0230_mRNA;ortholog_cluster=OG0001078;product=term%3DExocyst complex component Sec5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15469;Ontology_term=GO:0006893,GO:0000145 LTnewLM_14 Pfam protein_match 64759 65145 . + . Parent=LTnewLM_140007400.1:pep;Name=PF15469;signature_desc=Exocyst complex component Sec5;Ontology_term=GO:0006893,GO:0000145 ### LTnewLM_14 AUGUSTUS gene 71192 71620 1 + . ID=LTnewLM_140007500 LTnewLM_14 AUGUSTUS mRNA 71192 71620 1 + . ID=LTnewLM_140007500.1;Parent=LTnewLM_140007500 LTnewLM_14 AUGUSTUS CDS 71192 71620 1 + 0 ID=LTnewLM_140007500.1:CDS:1;Parent=LTnewLM_140007500.1 ### LTnewLM_14 . polypeptide 71192 71620 . + . ID=LTnewLM_140007500.1:pep;Derives_from=LTnewLM_140007500.1;orthologous_to=LmjF.14.0240_mRNA;ortholog_cluster=OG0001079;product=term%3DScavenger mRNA decapping enzyme C-term binding/HIT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11969|Pfam:PF01230 LTnewLM_14 Pfam protein_match 71201 71530 . + . Parent=LTnewLM_140007500.1:pep;Name=PF11969;signature_desc=Scavenger mRNA decapping enzyme C-term binding LTnewLM_14 Pfam protein_match 71225 71509 . + . Parent=LTnewLM_140007500.1:pep;Name=PF01230;signature_desc=HIT domain ### LTnewLM_14 AUGUSTUS gene 72276 72794 1 + . ID=LTnewLM_140007600 LTnewLM_14 AUGUSTUS mRNA 72276 72794 1 + . ID=LTnewLM_140007600.1;Parent=LTnewLM_140007600 LTnewLM_14 AUGUSTUS CDS 72276 72794 1 + 0 ID=LTnewLM_140007600.1:CDS:1;Parent=LTnewLM_140007600.1 ### LTnewLM_14 . polypeptide 72276 72794 . + . ID=LTnewLM_140007600.1:pep;Derives_from=LTnewLM_140007600.1;orthologous_to=LmjF.14.0250_mRNA;ortholog_cluster=OG0001080;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 75069 77237 1 + . ID=LTnewLM_140007700 LTnewLM_14 AUGUSTUS mRNA 75069 77237 1 + . ID=LTnewLM_140007700.1;Parent=LTnewLM_140007700 LTnewLM_14 AUGUSTUS CDS 75069 77237 1 + 0 ID=LTnewLM_140007700.1:CDS:1;Parent=LTnewLM_140007700.1 ### LTnewLM_14 . polypeptide 75069 77237 . + . ID=LTnewLM_140007700.1:pep;Derives_from=LTnewLM_140007700.1;orthologous_to=LmjF.14.0260_mRNA;ortholog_cluster=OG0001081;product=term%3Dvon Willebrand factor type A domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13768 LTnewLM_14 Pfam protein_match 76002 76511 . + . Parent=LTnewLM_140007700.1:pep;Name=PF13768;signature_desc=von Willebrand factor type A domain ### LTnewLM_14 AUGUSTUS gene 78373 79821 1 + . ID=LTnewLM_140007800 LTnewLM_14 AUGUSTUS mRNA 78373 79821 1 + . ID=LTnewLM_140007800.1;Parent=LTnewLM_140007800 LTnewLM_14 AUGUSTUS CDS 78373 79821 1 + 0 ID=LTnewLM_140007800.1:CDS:1;Parent=LTnewLM_140007800.1 ### LTnewLM_14 . polypeptide 78373 79821 . + . ID=LTnewLM_140007800.1:pep;Derives_from=LTnewLM_140007800.1;orthologous_to=LmjF.14.0270_mRNA;ortholog_cluster=OG0001082;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 80863 83759 0.75 + . ID=LTnewLM_140007900 LTnewLM_14 AUGUSTUS mRNA 80863 83759 0.75 + . ID=LTnewLM_140007900.1;Parent=LTnewLM_140007900 LTnewLM_14 AUGUSTUS CDS 80863 83691 0.75 + 0 ID=LTnewLM_140007900.1:CDS:1;Parent=LTnewLM_140007900.1 LTnewLM_14 AUGUSTUS CDS 83757 83759 0.75 + 0 ID=LTnewLM_140007900.1:CDS:2;Parent=LTnewLM_140007900.1 ### LTnewLM_14 . polypeptide 80863 83759 . + . ID=LTnewLM_140007900.1:pep;Derives_from=LTnewLM_140007900.1;orthologous_to=LmjF.14.0280_mRNA;ortholog_cluster=OG0001083;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 84744 85775 1 + . ID=LTnewLM_140008000 LTnewLM_14 AUGUSTUS mRNA 84744 85775 1 + . ID=LTnewLM_140008000.1;Parent=LTnewLM_140008000 LTnewLM_14 AUGUSTUS CDS 84744 85775 1 + 0 ID=LTnewLM_140008000.1:CDS:1;Parent=LTnewLM_140008000.1 ### LTnewLM_14 . polypeptide 84744 85775 . + . ID=LTnewLM_140008000.1:pep;Derives_from=LTnewLM_140008000.1;orthologous_to=LmjF.14.0290_mRNA;ortholog_cluster=OG0001084;product=term%3DNAD dependent epimerase/dehydratase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01370;Ontology_term=GO:0003824,GO:0050662 LTnewLM_14 Pfam protein_match 84759 85460 . + . Parent=LTnewLM_140008000.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 ### LTnewLM_14 AUGUSTUS gene 86397 87323 1 + . ID=LTnewLM_140008100 LTnewLM_14 AUGUSTUS mRNA 86397 87323 1 + . ID=LTnewLM_140008100.1;Parent=LTnewLM_140008100 LTnewLM_14 AUGUSTUS CDS 86397 87323 1 + 0 ID=LTnewLM_140008100.1:CDS:1;Parent=LTnewLM_140008100.1 ### LTnewLM_14 . polypeptide 86397 87323 . + . ID=LTnewLM_140008100.1:pep;Derives_from=LTnewLM_140008100.1;orthologous_to=LmjF.14.0300_mRNA;ortholog_cluster=OG0001085;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 88087 88944 1 + . ID=LTnewLM_140008200 LTnewLM_14 AUGUSTUS mRNA 88087 88944 1 + . ID=LTnewLM_140008200.1;Parent=LTnewLM_140008200 LTnewLM_14 AUGUSTUS CDS 88087 88944 1 + 0 ID=LTnewLM_140008200.1:CDS:1;Parent=LTnewLM_140008200.1 ### LTnewLM_14 . polypeptide 88087 88944 . + . ID=LTnewLM_140008200.1:pep;Derives_from=LTnewLM_140008200.1;orthologous_to=LmjF.14.0310_mRNA;ortholog_cluster=OG0001086;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_14 Pfam protein_match 88099 88164 . + . Parent=LTnewLM_140008200.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 LTnewLM_14 Pfam protein_match 88171 88746 . + . Parent=LTnewLM_140008200.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_14 AUGUSTUS gene 91925 94336 1 + . ID=LTnewLM_140008300 LTnewLM_14 AUGUSTUS mRNA 91925 94336 1 + . ID=LTnewLM_140008300.1;Parent=LTnewLM_140008300 LTnewLM_14 AUGUSTUS CDS 91925 94336 1 + 0 ID=LTnewLM_140008300.1:CDS:1;Parent=LTnewLM_140008300.1 ### LTnewLM_14 . polypeptide 91925 94336 . + . ID=LTnewLM_140008300.1:pep;Derives_from=LTnewLM_140008300.1;orthologous_to=LmjF.14.0320_mRNA;ortholog_cluster=OG0001087;product=term%3DAmino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13520|Pfam:PF00324;Ontology_term=GO:0006810,GO:0015171,GO:0055085,GO:0016020,GO:0003333 LTnewLM_14 Pfam protein_match 92216 93409 . + . Parent=LTnewLM_140008300.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 LTnewLM_14 Pfam protein_match 92288 93289 . + . Parent=LTnewLM_140008300.1:pep;Name=PF00324;signature_desc=Amino acid permease;Ontology_term=GO:0006810,GO:0055085,GO:0016020 ### LTnewLM_14 AUGUSTUS gene 95846 97981 1 + . ID=LTnewLM_140008400 LTnewLM_14 AUGUSTUS mRNA 95846 97981 1 + . ID=LTnewLM_140008400.1;Parent=LTnewLM_140008400 LTnewLM_14 AUGUSTUS CDS 95846 97981 1 + 0 ID=LTnewLM_140008400.1:CDS:1;Parent=LTnewLM_140008400.1 ### LTnewLM_14 . polypeptide 95846 97981 . + . ID=LTnewLM_140008400.1:pep;Derives_from=LTnewLM_140008400.1;orthologous_to=LmjF.14.0330_mRNA;ortholog_cluster=OG0001088;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_14 Pfam protein_match 96815 97912 . + . Parent=LTnewLM_140008400.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_14 AUGUSTUS gene 102555 105836 1 + . ID=LTnewLM_140008500 LTnewLM_14 AUGUSTUS mRNA 102555 105836 1 + . ID=LTnewLM_140008500.1;Parent=LTnewLM_140008500 LTnewLM_14 AUGUSTUS CDS 102555 105836 1 + 0 ID=LTnewLM_140008500.1:CDS:1;Parent=LTnewLM_140008500.1 ### LTnewLM_14 . polypeptide 102555 105836 . + . ID=LTnewLM_140008500.1:pep;Derives_from=LTnewLM_140008500.1;orthologous_to=LmjF.14.0340_mRNA;ortholog_cluster=OG0001089;product=term%3DInositol polyphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03770;Ontology_term=GO:0008440 LTnewLM_14 Pfam protein_match 105288 105827 . + . Parent=LTnewLM_140008500.1:pep;Name=PF03770;signature_desc=Inositol polyphosphate kinase;Ontology_term=GO:0008440 ### LTnewLM_14 AUGUSTUS gene 108504 110534 1 + . ID=LTnewLM_140008600 LTnewLM_14 AUGUSTUS mRNA 108504 110534 1 + . ID=LTnewLM_140008600.1;Parent=LTnewLM_140008600 LTnewLM_14 AUGUSTUS CDS 108504 110534 1 + 0 ID=LTnewLM_140008600.1:CDS:1;Parent=LTnewLM_140008600.1 ### LTnewLM_14 . polypeptide 108504 110534 . + . ID=LTnewLM_140008600.1:pep;Derives_from=LTnewLM_140008600.1;orthologous_to=LmjF.14.0350_mRNA;ortholog_cluster=OG0001090;product=term%3DThreonine synthase N terminus/Pyridoxal-phosphate dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14821|Pfam:PF00291 LTnewLM_14 Pfam protein_match 108810 109049 . + . Parent=LTnewLM_140008600.1:pep;Name=PF14821;signature_desc=Threonine synthase N terminus LTnewLM_14 Pfam protein_match 109227 110192 . + . Parent=LTnewLM_140008600.1:pep;Name=PF00291;signature_desc=Pyridoxal-phosphate dependent enzyme ### LTnewLM_14 AUGUSTUS gene 112498 115635 1 + . ID=LTnewLM_140008700 LTnewLM_14 AUGUSTUS mRNA 112498 115635 1 + . ID=LTnewLM_140008700.1;Parent=LTnewLM_140008700 LTnewLM_14 AUGUSTUS CDS 112498 115635 1 + 0 ID=LTnewLM_140008700.1:CDS:1;Parent=LTnewLM_140008700.1 ### LTnewLM_14 . polypeptide 112498 115635 . + . ID=LTnewLM_140008700.1:pep;Derives_from=LTnewLM_140008700.1;orthologous_to=LmjF.14.0360_mRNA;ortholog_cluster=OG0001091;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . polypeptide 116981 121758 . + . ID=LTnewLM_140008800.1:pep;Derives_from=LTnewLM_140008800.1;orthologous_to=LTnewLM_140008800.2,LmjF.14.0370_mRNA;ortholog_cluster=OG0000330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 116981 126969 0.94 + . ID=LTnewLM_140008800 LTnewLM_14 AUGUSTUS mRNA 116981 121758 0.63 + . ID=LTnewLM_140008800.1;Parent=LTnewLM_140008800 LTnewLM_14 AUGUSTUS CDS 116981 121666 0.63 + 0 ID=LTnewLM_140008800.1:CDS:1;Parent=LTnewLM_140008800.1 LTnewLM_14 AUGUSTUS CDS 121753 121758 0.94 + 0 ID=LTnewLM_140008800.1:CDS:2;Parent=LTnewLM_140008800.1 LTnewLM_14 AUGUSTUS mRNA 116981 126969 0.31 + . ID=LTnewLM_140008800.2;Parent=LTnewLM_140008800 LTnewLM_14 AUGUSTUS CDS 116981 125837 0.45 + 0 ID=LTnewLM_140008800.2:CDS:1;Parent=LTnewLM_140008800.2 LTnewLM_14 AUGUSTUS CDS 125927 126969 0.41 + 2 ID=LTnewLM_140008800.2:CDS:2;Parent=LTnewLM_140008800.2 ### LTnewLM_14 . polypeptide 116981 126969 . + . ID=LTnewLM_140008800.2:pep;Derives_from=LTnewLM_140008800.2;orthologous_to=LTnewLM_140008800.1,LmjF.14.0370_mRNA;ortholog_cluster=OG0000330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 128375 130198 1 + . ID=LTnewLM_140008900 LTnewLM_14 AUGUSTUS mRNA 128375 130198 1 + . ID=LTnewLM_140008900.1;Parent=LTnewLM_140008900 LTnewLM_14 AUGUSTUS CDS 128375 130198 1 + 0 ID=LTnewLM_140008900.1:CDS:1;Parent=LTnewLM_140008900.1 ### LTnewLM_14 . polypeptide 128375 130198 . + . ID=LTnewLM_140008900.1:pep;Derives_from=LTnewLM_140008900.1;orthologous_to=LmjF.14.0380_mRNA;ortholog_cluster=OG0001092;product=term%3DPlasma-membrane choline transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04515 LTnewLM_14 Pfam protein_match 129221 130078 . + . Parent=LTnewLM_140008900.1:pep;Name=PF04515;signature_desc=Plasma-membrane choline transporter ### LTnewLM_14 AUGUSTUS gene 132847 133779 1 + . ID=LTnewLM_140009000 LTnewLM_14 AUGUSTUS mRNA 132847 133779 1 + . ID=LTnewLM_140009000.1;Parent=LTnewLM_140009000 LTnewLM_14 AUGUSTUS CDS 132847 133779 1 + 0 ID=LTnewLM_140009000.1:CDS:1;Parent=LTnewLM_140009000.1 ### LTnewLM_14 . polypeptide 132847 133779 . + . ID=LTnewLM_140009000.1:pep;Derives_from=LTnewLM_140009000.1;orthologous_to=LTnewLM_140009100.1,LmjF.14.0390_mRNA,LmjF.14.0400_mRNA;ortholog_cluster=OG0000119;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 136514 137446 1 + . ID=LTnewLM_140009100 LTnewLM_14 AUGUSTUS mRNA 136514 137446 1 + . ID=LTnewLM_140009100.1;Parent=LTnewLM_140009100 LTnewLM_14 AUGUSTUS CDS 136514 137446 1 + 0 ID=LTnewLM_140009100.1:CDS:1;Parent=LTnewLM_140009100.1 ### LTnewLM_14 . polypeptide 136514 137446 . + . ID=LTnewLM_140009100.1:pep;Derives_from=LTnewLM_140009100.1;orthologous_to=LTnewLM_140009000.1,LmjF.14.0390_mRNA,LmjF.14.0400_mRNA;ortholog_cluster=OG0000119;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 140291 140875 1 + . ID=LTnewLM_140009200 LTnewLM_14 AUGUSTUS mRNA 140291 140875 1 + . ID=LTnewLM_140009200.1;Parent=LTnewLM_140009200 LTnewLM_14 AUGUSTUS CDS 140291 140875 1 + 0 ID=LTnewLM_140009200.1:CDS:1;Parent=LTnewLM_140009200.1 ### LTnewLM_14 . polypeptide 140291 140875 . + . ID=LTnewLM_140009200.1:pep;Derives_from=LTnewLM_140009200.1;orthologous_to=LmjF.14.0405_mRNA;ortholog_cluster=OG0001093;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 141499 144708 1 + . ID=LTnewLM_140009300 LTnewLM_14 AUGUSTUS mRNA 141499 144708 1 + . ID=LTnewLM_140009300.1;Parent=LTnewLM_140009300 LTnewLM_14 AUGUSTUS CDS 141499 144708 1 + 0 ID=LTnewLM_140009300.1:CDS:1;Parent=LTnewLM_140009300.1 ### LTnewLM_14 . polypeptide 141499 144708 . + . ID=LTnewLM_140009300.1:pep;Derives_from=LTnewLM_140009300.1;orthologous_to=LmjF.14.0410_mRNA;ortholog_cluster=OG0001094;product=term%3DUtp25%2C U3 small nucleolar RNA-associated SSU processome protein 25%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06862;Ontology_term=GO:0005634 LTnewLM_14 Pfam protein_match 143446 144693 . + . Parent=LTnewLM_140009300.1:pep;Name=PF06862;signature_desc=Utp25%2C U3 small nucleolar RNA-associated SSU processome protein 25;Ontology_term=GO:0005634 ### LTnewLM_14 AUGUSTUS gene 145879 148338 1 + . ID=LTnewLM_140009400 LTnewLM_14 AUGUSTUS mRNA 145879 148338 1 + . ID=LTnewLM_140009400.1;Parent=LTnewLM_140009400 LTnewLM_14 AUGUSTUS CDS 145879 148338 1 + 0 ID=LTnewLM_140009400.1:CDS:1;Parent=LTnewLM_140009400.1 ### LTnewLM_14 . polypeptide 145879 148338 . + . ID=LTnewLM_140009400.1:pep;Derives_from=LTnewLM_140009400.1;orthologous_to=LmjF.14.0420_mRNA;ortholog_cluster=OG0001095;product=term%3DIguana/Dzip1-like DAZ-interacting protein N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13815 LTnewLM_14 Pfam protein_match 145894 146244 . + . Parent=LTnewLM_140009400.1:pep;Name=PF13815;signature_desc=Iguana/Dzip1-like DAZ-interacting protein N-terminal ### LTnewLM_14 AUGUSTUS gene 149542 150744 1 + . ID=LTnewLM_140009500 LTnewLM_14 AUGUSTUS mRNA 149542 150744 1 + . ID=LTnewLM_140009500.1;Parent=LTnewLM_140009500 LTnewLM_14 AUGUSTUS CDS 149542 150744 1 + 0 ID=LTnewLM_140009500.1:CDS:1;Parent=LTnewLM_140009500.1 ### LTnewLM_14 . polypeptide 149542 150744 . + . ID=LTnewLM_140009500.1:pep;Derives_from=LTnewLM_140009500.1;orthologous_to=LmjF.14.0430_mRNA;ortholog_cluster=OG0001096;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 151480 153132 1 + . ID=LTnewLM_140009600 LTnewLM_14 AUGUSTUS mRNA 151480 153132 1 + . ID=LTnewLM_140009600.1;Parent=LTnewLM_140009600 LTnewLM_14 AUGUSTUS CDS 151480 153132 1 + 0 ID=LTnewLM_140009600.1:CDS:1;Parent=LTnewLM_140009600.1 ### LTnewLM_14 . polypeptide 151480 153132 . + . ID=LTnewLM_140009600.1:pep;Derives_from=LTnewLM_140009600.1;orthologous_to=LmjF.14.0440_mRNA;ortholog_cluster=OG0001097;product=term%3DPyridine nucleotide-disulphide oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF00070;Ontology_term=GO:0055114,GO:0016491,GO:0050660 LTnewLM_14 Pfam protein_match 151624 152235 . + . Parent=LTnewLM_140009600.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_14 Pfam protein_match 152026 152235 . + . Parent=LTnewLM_140009600.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_14 AUGUSTUS gene 154008 154529 1 + . ID=LTnewLM_140009700 LTnewLM_14 AUGUSTUS mRNA 154008 154529 1 + . ID=LTnewLM_140009700.1;Parent=LTnewLM_140009700 LTnewLM_14 AUGUSTUS CDS 154008 154529 1 + 0 ID=LTnewLM_140009700.1:CDS:1;Parent=LTnewLM_140009700.1 ### LTnewLM_14 . polypeptide 154008 154529 . + . ID=LTnewLM_140009700.1:pep;Derives_from=LTnewLM_140009700.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 155762 156730 1 + . ID=LTnewLM_140009800 LTnewLM_14 AUGUSTUS mRNA 155762 156730 1 + . ID=LTnewLM_140009800.1;Parent=LTnewLM_140009800 LTnewLM_14 AUGUSTUS CDS 155762 156730 1 + 0 ID=LTnewLM_140009800.1:CDS:1;Parent=LTnewLM_140009800.1 ### LTnewLM_14 . polypeptide 155762 156730 . + . ID=LTnewLM_140009800.1:pep;Derives_from=LTnewLM_140009800.1;orthologous_to=LmjF.14.0450_mRNA;ortholog_cluster=OG0001098;product=term%3DN-terminal conserved domain of Nudc./CS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14050|Pfam:PF04969 LTnewLM_14 Pfam protein_match 155774 155878 . + . Parent=LTnewLM_140009800.1:pep;Name=PF14050;signature_desc=N-terminal conserved domain of Nudc. LTnewLM_14 Pfam protein_match 156248 156472 . + . Parent=LTnewLM_140009800.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_14 AUGUSTUS gene 157464 159023 1 + . ID=LTnewLM_140009900 LTnewLM_14 AUGUSTUS mRNA 157464 159023 1 + . ID=LTnewLM_140009900.1;Parent=LTnewLM_140009900 LTnewLM_14 AUGUSTUS CDS 157464 159023 1 + 0 ID=LTnewLM_140009900.1:CDS:1;Parent=LTnewLM_140009900.1 ### LTnewLM_14 . polypeptide 157464 159023 . + . ID=LTnewLM_140009900.1:pep;Derives_from=LTnewLM_140009900.1;orthologous_to=LmjF.14.0460_mRNA;ortholog_cluster=OG0001099;product=term%3DCys/Met metabolism PLP-dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01053;Ontology_term=GO:0030170 LTnewLM_14 Pfam protein_match 157872 158978 . + . Parent=LTnewLM_140009900.1:pep;Name=PF01053;signature_desc=Cys/Met metabolism PLP-dependent enzyme;Ontology_term=GO:0030170 ### LTnewLM_14 AUGUSTUS gene 161580 162293 1 + . ID=LTnewLM_140010000 LTnewLM_14 AUGUSTUS mRNA 161580 162293 1 + . ID=LTnewLM_140010000.1;Parent=LTnewLM_140010000 LTnewLM_14 AUGUSTUS CDS 161580 162293 1 + 0 ID=LTnewLM_140010000.1:CDS:1;Parent=LTnewLM_140010000.1 ### LTnewLM_14 . polypeptide 161580 162293 . + . ID=LTnewLM_140010000.1:pep;Derives_from=LTnewLM_140010000.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 162324 162748 0.95 + . ID=LTnewLM_140010100 LTnewLM_14 AUGUSTUS mRNA 162324 162748 0.95 + . ID=LTnewLM_140010100.1;Parent=LTnewLM_140010100 LTnewLM_14 AUGUSTUS CDS 162324 162614 0.95 + 0 ID=LTnewLM_140010100.1:CDS:1;Parent=LTnewLM_140010100.1 LTnewLM_14 AUGUSTUS CDS 162692 162748 0.99 + 0 ID=LTnewLM_140010100.1:CDS:2;Parent=LTnewLM_140010100.1 ### LTnewLM_14 . polypeptide 162324 162748 . + . ID=LTnewLM_140010100.1:pep;Derives_from=LTnewLM_140010100.1;product=term%3DUDP-glucoronosyl and UDP-glucosyl transferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00201;Ontology_term=GO:0016758,GO:0008152 LTnewLM_14 Pfam protein_match 162330 162608 . + . Parent=LTnewLM_140010100.1:pep;Name=PF00201;signature_desc=UDP-glucoronosyl and UDP-glucosyl transferase;Ontology_term=GO:0016758,GO:0008152 ### LTnewLM_14 AUGUSTUS gene 172350 173174 1 - . ID=LTnewLM_140010200 LTnewLM_14 AUGUSTUS mRNA 172350 173174 1 - . ID=LTnewLM_140010200.1;Parent=LTnewLM_140010200 LTnewLM_14 AUGUSTUS CDS 172350 173174 1 - 0 ID=LTnewLM_140010200.1:CDS:1;Parent=LTnewLM_140010200.1 ### LTnewLM_14 . polypeptide 172350 173174 . - . ID=LTnewLM_140010200.1:pep;Derives_from=LTnewLM_140010200.1;orthologous_to=LTnewLM_140010300.1,LmjF.14.0480_mRNA,LmjF.14.0490_mRNA;ortholog_cluster=OG0000120;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 177885 178712 1 - . ID=LTnewLM_140010300 LTnewLM_14 AUGUSTUS mRNA 177885 178712 1 - . ID=LTnewLM_140010300.1;Parent=LTnewLM_140010300 LTnewLM_14 AUGUSTUS CDS 177885 178712 1 - 0 ID=LTnewLM_140010300.1:CDS:1;Parent=LTnewLM_140010300.1 ### LTnewLM_14 . polypeptide 177885 178712 . - . ID=LTnewLM_140010300.1:pep;Derives_from=LTnewLM_140010300.1;orthologous_to=LTnewLM_140010200.1,LmjF.14.0480_mRNA,LmjF.14.0490_mRNA;ortholog_cluster=OG0000120;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 181840 182064 1 - . ID=LTnewLM_140010400 LTnewLM_14 AUGUSTUS mRNA 181840 182064 1 - . ID=LTnewLM_140010400.1;Parent=LTnewLM_140010400 LTnewLM_14 AUGUSTUS CDS 181840 182064 1 - 0 ID=LTnewLM_140010400.1:CDS:1;Parent=LTnewLM_140010400.1 ### LTnewLM_14 . polypeptide 181840 182064 . - . ID=LTnewLM_140010400.1:pep;Derives_from=LTnewLM_140010400.1;orthologous_to=LTnewLM_110011900.1;ortholog_cluster=OG0000786;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 Liftoff gene 183430 185463 . - . ID=LTnewLM_140010500;coverage=1.0;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.14.0500_0 LTnewLM_14 Liftoff mRNA 183430 185463 . - . ID=LTnewLM_140010500.1;Parent=LTnewLM_140010500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 183430 185463 . - 0 ID=LTnewLM_140010500.1:CDS:1;Parent=LTnewLM_140010500.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 183430 185463 . - . ID=LTnewLM_140010500.1:pep;Derives_from=LTnewLM_140010500.1;orthologous_to=LmjF.14.0500_mRNA;ortholog_cluster=OG0001100;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 189461 190864 1 - . ID=LTnewLM_140010600 LTnewLM_14 AUGUSTUS mRNA 189461 190864 1 - . ID=LTnewLM_140010600.1;Parent=LTnewLM_140010600 LTnewLM_14 AUGUSTUS CDS 189461 190864 1 - 0 ID=LTnewLM_140010600.1:CDS:1;Parent=LTnewLM_140010600.1 ### LTnewLM_14 . polypeptide 189461 190864 . - . ID=LTnewLM_140010600.1:pep;Derives_from=LTnewLM_140010600.1;orthologous_to=LmjF.14.0510_mRNA;ortholog_cluster=OG0001101;product=term%3DFatty acid desaturase/Cytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487|Pfam:PF00173;Ontology_term=GO:0020037,GO:0006629 LTnewLM_14 Pfam protein_match 189566 189706 . - . Parent=LTnewLM_140010600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 LTnewLM_14 Pfam protein_match 190004 190663 . - . Parent=LTnewLM_140010600.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_14 AUGUSTUS gene 192734 193063 1 - . ID=LTnewLM_140010700 LTnewLM_14 AUGUSTUS mRNA 192734 193063 1 - . ID=LTnewLM_140010700.1;Parent=LTnewLM_140010700 LTnewLM_14 AUGUSTUS CDS 192734 193063 1 - 0 ID=LTnewLM_140010700.1:CDS:1;Parent=LTnewLM_140010700.1 ### LTnewLM_14 . polypeptide 192734 193063 . - . ID=LTnewLM_140010700.1:pep;Derives_from=LTnewLM_140010700.1;orthologous_to=LmjF.14.0520_mRNA;ortholog_cluster=OG0001102;product=term%3DHYPK UBA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19026 LTnewLM_14 Pfam protein_match 192764 192880 . - . Parent=LTnewLM_140010700.1:pep;Name=PF19026;signature_desc=HYPK UBA domain ### LTnewLM_14 AUGUSTUS gene 193808 195322 1 - . ID=LTnewLM_140010800 LTnewLM_14 AUGUSTUS mRNA 193808 195322 1 - . ID=LTnewLM_140010800.1;Parent=LTnewLM_140010800 LTnewLM_14 AUGUSTUS CDS 193808 195322 1 - 0 ID=LTnewLM_140010800.1:CDS:1;Parent=LTnewLM_140010800.1 ### LTnewLM_14 . polypeptide 193808 195322 . - . ID=LTnewLM_140010800.1:pep;Derives_from=LTnewLM_140010800.1;orthologous_to=LmjF.14.0530_mRNA;ortholog_cluster=OG0001103;product=term%3DIon channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885 LTnewLM_14 Pfam protein_match 194522 194716 . - . Parent=LTnewLM_140010800.1:pep;Name=PF07885;signature_desc=Ion channel ### LTnewLM_14 . polypeptide 196749 198248 . - . ID=LTnewLM_140010900.1:pep;Derives_from=LTnewLM_140010900.1;orthologous_to=LTnewLM_140010900.2,LmjF.14.0540.1_mRNA,LmjF.14.0540.2_mRNA;ortholog_cluster=OG0000121;product=term%3DIon channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885 LTnewLM_14 Pfam protein_match 197415 197615 . - . Parent=LTnewLM_140010900.1:pep;Name=PF07885;signature_desc=Ion channel ### LTnewLM_14 . polypeptide 196749 198410 . - . ID=LTnewLM_140010900.2:pep;Derives_from=LTnewLM_140010900.2;orthologous_to=LTnewLM_140010900.1,LmjF.14.0540.1_mRNA,LmjF.14.0540.2_mRNA;ortholog_cluster=OG0000121;product=term%3DIon channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885 LTnewLM_14 Pfam protein_match 197415 197615 . - . Parent=LTnewLM_140010900.2:pep;Name=PF07885;signature_desc=Ion channel ### LTnewLM_14 Liftoff gene 196749 198493 . - . ID=LTnewLM_140010900;coverage=0.997;sequence_ID=0.954;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.14.0540_0 LTnewLM_14 Liftoff mRNA 196749 198399 . - . ID=LTnewLM_140010900.1;Parent=LTnewLM_140010900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 196749 198248 . - 0 ID=LTnewLM_140010900.1:CDS:1;Parent=LTnewLM_140010900.1;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 198249 198399 . - . ID=LTnewLM_140010900:five_prime_UTR;Parent=LTnewLM_140010900.1;extra_copy_number=0 LTnewLM_14 Liftoff mRNA 196749 198493 . - . ID=LTnewLM_140010900.2;Parent=LTnewLM_140010900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 196749 198410 . - 0 ID=LTnewLM_140010900.2:CDS:1;Parent=LTnewLM_140010900.2;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 198411 198493 . - . ID=LTnewLM_140010900:five_prime_UTR.1;Parent=LTnewLM_140010900.2;extra_copy_number=0 ### LTnewLM_14 AUGUSTUS gene 201175 202266 1 - . ID=LTnewLM_140011000 LTnewLM_14 AUGUSTUS mRNA 201175 202266 1 - . ID=LTnewLM_140011000.1;Parent=LTnewLM_140011000 LTnewLM_14 AUGUSTUS CDS 201175 202266 1 - 0 ID=LTnewLM_140011000.1:CDS:1;Parent=LTnewLM_140011000.1 ### LTnewLM_14 . polypeptide 201175 202266 . - . ID=LTnewLM_140011000.1:pep;Derives_from=LTnewLM_140011000.1;orthologous_to=LmjF.14.0550_mRNA;ortholog_cluster=OG0001104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 206768 208234 1 - . ID=LTnewLM_140011100 LTnewLM_14 AUGUSTUS mRNA 206768 208234 1 - . ID=LTnewLM_140011100.1;Parent=LTnewLM_140011100 LTnewLM_14 AUGUSTUS CDS 206768 208234 1 - 0 ID=LTnewLM_140011100.1:CDS:1;Parent=LTnewLM_140011100.1 ### LTnewLM_14 . polypeptide 206768 208234 . - . ID=LTnewLM_140011100.1:pep;Derives_from=LTnewLM_140011100.1;orthologous_to=LmjF.14.0560_mRNA;ortholog_cluster=OG0001105;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 209209 209991 1 - . ID=LTnewLM_140011200 LTnewLM_14 AUGUSTUS mRNA 209209 209991 1 - . ID=LTnewLM_140011200.1;Parent=LTnewLM_140011200 LTnewLM_14 AUGUSTUS CDS 209209 209991 1 - 0 ID=LTnewLM_140011200.1:CDS:1;Parent=LTnewLM_140011200.1 ### LTnewLM_14 . polypeptide 209209 209991 . - . ID=LTnewLM_140011200.1:pep;Derives_from=LTnewLM_140011200.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 211184 214708 1 - . ID=LTnewLM_140011300 LTnewLM_14 AUGUSTUS mRNA 211184 214708 1 - . ID=LTnewLM_140011300.1;Parent=LTnewLM_140011300 LTnewLM_14 AUGUSTUS CDS 211184 214708 1 - 0 ID=LTnewLM_140011300.1:CDS:1;Parent=LTnewLM_140011300.1 ### LTnewLM_14 . polypeptide 211184 214708 . - . ID=LTnewLM_140011300.1:pep;Derives_from=LTnewLM_140011300.1;orthologous_to=LmjF.14.0570_mRNA;ortholog_cluster=OG0001106;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 212060 212170 . - . Parent=LTnewLM_140011300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 212189 212284 . - . Parent=LTnewLM_140011300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 213509 213586 . - . Parent=LTnewLM_140011300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_14 AUGUSTUS gene 215974 216354 1 - . ID=LTnewLM_140011400 LTnewLM_14 AUGUSTUS mRNA 215974 216354 1 - . ID=LTnewLM_140011400.1;Parent=LTnewLM_140011400 LTnewLM_14 AUGUSTUS CDS 215974 216354 1 - 0 ID=LTnewLM_140011400.1:CDS:1;Parent=LTnewLM_140011400.1 ### LTnewLM_14 . polypeptide 215974 216354 . - . ID=LTnewLM_140011400.1:pep;Derives_from=LTnewLM_140011400.1;orthologous_to=LmjF.14.0580_mRNA;ortholog_cluster=OG0001107;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . polypeptide 216941 221092 . - . ID=LTnewLM_140011500.1:pep;Derives_from=LTnewLM_140011500.1;orthologous_to=LTnewLM_140011500.2,LmjF.14.0590_mRNA;ortholog_cluster=OG0000331;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 216941 221635 2 - . ID=LTnewLM_140011500 LTnewLM_14 AUGUSTUS mRNA 216941 221092 1 - . ID=LTnewLM_140011500.1;Parent=LTnewLM_140011500 LTnewLM_14 AUGUSTUS CDS 216941 221092 1 - 0 ID=LTnewLM_140011500.1:CDS:1;Parent=LTnewLM_140011500.1 LTnewLM_14 AUGUSTUS mRNA 216941 221635 1 - . ID=LTnewLM_140011500.2;Parent=LTnewLM_140011500 LTnewLM_14 AUGUSTUS CDS 216941 221635 1 - 0 ID=LTnewLM_140011500.2:CDS:1;Parent=LTnewLM_140011500.2 ### LTnewLM_14 . polypeptide 216941 221635 . - . ID=LTnewLM_140011500.2:pep;Derives_from=LTnewLM_140011500.2;orthologous_to=LTnewLM_140011500.1,LmjF.14.0590_mRNA;ortholog_cluster=OG0000331;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 222609 224138 1 - . ID=LTnewLM_140011600 LTnewLM_14 AUGUSTUS mRNA 222609 224138 1 - . ID=LTnewLM_140011600.1;Parent=LTnewLM_140011600 LTnewLM_14 AUGUSTUS CDS 222609 224138 1 - 0 ID=LTnewLM_140011600.1:CDS:1;Parent=LTnewLM_140011600.1 ### LTnewLM_14 . polypeptide 222609 224138 . - . ID=LTnewLM_140011600.1:pep;Derives_from=LTnewLM_140011600.1;orthologous_to=LmjF.14.0600_mRNA;ortholog_cluster=OG0001108;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 224781 226169 1 - . ID=LTnewLM_140011700 LTnewLM_14 AUGUSTUS mRNA 224781 226169 1 - . ID=LTnewLM_140011700.1;Parent=LTnewLM_140011700 LTnewLM_14 AUGUSTUS CDS 224781 226169 1 - 0 ID=LTnewLM_140011700.1:CDS:1;Parent=LTnewLM_140011700.1 ### LTnewLM_14 . polypeptide 224781 226169 . - . ID=LTnewLM_140011700.1:pep;Derives_from=LTnewLM_140011700.1;orthologous_to=LmjF.14.0610_mRNA;ortholog_cluster=OG0001109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . polypeptide 226902 227756 . - . ID=LTnewLM_140011800.1:pep;Derives_from=LTnewLM_140011800.1;orthologous_to=LTnewLM_140011800.2,LmjF.14.0620_mRNA;ortholog_cluster=OG0000332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 226902 228296 2 - . ID=LTnewLM_140011800 LTnewLM_14 AUGUSTUS mRNA 226902 227756 1 - . ID=LTnewLM_140011800.1;Parent=LTnewLM_140011800 LTnewLM_14 AUGUSTUS CDS 226902 227756 1 - 0 ID=LTnewLM_140011800.1:CDS:1;Parent=LTnewLM_140011800.1 LTnewLM_14 AUGUSTUS mRNA 226902 228296 1 - . ID=LTnewLM_140011800.2;Parent=LTnewLM_140011800 LTnewLM_14 AUGUSTUS CDS 226902 228296 1 - 0 ID=LTnewLM_140011800.2:CDS:1;Parent=LTnewLM_140011800.2 ### LTnewLM_14 . polypeptide 226902 228296 . - . ID=LTnewLM_140011800.2:pep;Derives_from=LTnewLM_140011800.2;orthologous_to=LTnewLM_140011800.1,LmjF.14.0620_mRNA;ortholog_cluster=OG0000332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 229538 230218 1 - . ID=LTnewLM_140011900 LTnewLM_14 AUGUSTUS mRNA 229538 230218 1 - . ID=LTnewLM_140011900.1;Parent=LTnewLM_140011900 LTnewLM_14 AUGUSTUS CDS 229538 230218 1 - 0 ID=LTnewLM_140011900.1:CDS:1;Parent=LTnewLM_140011900.1 ### LTnewLM_14 . polypeptide 229538 230218 . - . ID=LTnewLM_140011900.1:pep;Derives_from=LTnewLM_140011900.1;orthologous_to=LmjF.14.0625_mRNA;ortholog_cluster=OG0001110;product=term%3DLSD1 zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06943 LTnewLM_14 Pfam protein_match 230129 230197 . - . Parent=LTnewLM_140011900.1:pep;Name=PF06943;signature_desc=LSD1 zinc finger ### LTnewLM_14 AUGUSTUS gene 233781 234698 1 - . ID=LTnewLM_140012000 LTnewLM_14 AUGUSTUS mRNA 233781 234698 1 - . ID=LTnewLM_140012000.1;Parent=LTnewLM_140012000 LTnewLM_14 AUGUSTUS CDS 233781 234698 1 - 0 ID=LTnewLM_140012000.1:CDS:1;Parent=LTnewLM_140012000.1 ### LTnewLM_14 . polypeptide 233781 234698 . - . ID=LTnewLM_140012000.1:pep;Derives_from=LTnewLM_140012000.1;orthologous_to=LmjF.14.0630_mRNA;ortholog_cluster=OG0001111;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 233841 234641 . - . Parent=LTnewLM_140012000.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 236865 237707 1 - . ID=LTnewLM_140012100 LTnewLM_14 AUGUSTUS mRNA 236865 237707 1 - . ID=LTnewLM_140012100.1;Parent=LTnewLM_140012100 LTnewLM_14 AUGUSTUS CDS 236865 237707 1 - 0 ID=LTnewLM_140012100.1:CDS:1;Parent=LTnewLM_140012100.1 ### LTnewLM_14 . polypeptide 236865 237707 . - . ID=LTnewLM_140012100.1:pep;Derives_from=LTnewLM_140012100.1;orthologous_to=LmjF.14.0640_mRNA;ortholog_cluster=OG0001112;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 236910 237650 . - . Parent=LTnewLM_140012100.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 240868 241725 1 - . ID=LTnewLM_140012200 LTnewLM_14 AUGUSTUS mRNA 240868 241725 1 - . ID=LTnewLM_140012200.1;Parent=LTnewLM_140012200 LTnewLM_14 AUGUSTUS CDS 240868 241725 1 - 0 ID=LTnewLM_140012200.1:CDS:1;Parent=LTnewLM_140012200.1 ### LTnewLM_14 . polypeptide 240868 241725 . - . ID=LTnewLM_140012200.1:pep;Derives_from=LTnewLM_140012200.1;orthologous_to=LmjF.14.0650_mRNA;ortholog_cluster=OG0001113;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 240883 241668 . - . Parent=LTnewLM_140012200.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 243332 244186 1 - . ID=LTnewLM_140012300 LTnewLM_14 AUGUSTUS mRNA 243332 244186 1 - . ID=LTnewLM_140012300.1;Parent=LTnewLM_140012300 LTnewLM_14 AUGUSTUS CDS 243332 244186 1 - 0 ID=LTnewLM_140012300.1:CDS:1;Parent=LTnewLM_140012300.1 ### LTnewLM_14 . polypeptide 243332 244186 . - . ID=LTnewLM_140012300.1:pep;Derives_from=LTnewLM_140012300.1;orthologous_to=LmjF.14.0660_mRNA;ortholog_cluster=OG0001114;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 243389 244129 . - . Parent=LTnewLM_140012300.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 249310 250194 1 - . ID=LTnewLM_140012400 LTnewLM_14 AUGUSTUS mRNA 249310 250194 1 - . ID=LTnewLM_140012400.1;Parent=LTnewLM_140012400 LTnewLM_14 AUGUSTUS CDS 249310 250194 1 - 0 ID=LTnewLM_140012400.1:CDS:1;Parent=LTnewLM_140012400.1 ### LTnewLM_14 . polypeptide 249310 250194 . - . ID=LTnewLM_140012400.1:pep;Derives_from=LTnewLM_140012400.1;orthologous_to=LmjF.14.0670_mRNA;ortholog_cluster=OG0001115;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 249343 250146 . - . Parent=LTnewLM_140012400.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 . pseudogene 254536 255324 490 - . ID=LTnewLM_140012500:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.14.0740:mRNA 19 262;original_prot_length=302 LTnewLM_14 . pseudogenic_transcript 254536 255324 . - . ID=LTnewLM_140012500.1;Parent=LTnewLM_140012500:pseudogene LTnewLM_14 . pseudogenic_exon 254536 255324 . - . ID=LTnewLM_140012500.1:pseudogenic_exon:1;Parent=LTnewLM_140012500.1 ### LTnewLM_14 . polypeptide 254536 255324 . - . ID=LTnewLM_140012500.1:pep;Derives_from=LTnewLM_140012500.1;orthologous_to=LTnewLM_140012600.1,LTnewLM_140012700.1,LmjF.14.0680_mRNA;ortholog_cluster=OG0000122;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 254539 255300 . - . Parent=LTnewLM_140012500.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 259268 260168 0.92 - . ID=LTnewLM_140012600 LTnewLM_14 AUGUSTUS mRNA 259268 260168 0.92 - . ID=LTnewLM_140012600.1;Parent=LTnewLM_140012600 LTnewLM_14 AUGUSTUS CDS 259268 259940 0.92 - 1 ID=LTnewLM_140012600.1:CDS:1;Parent=LTnewLM_140012600.1 LTnewLM_14 AUGUSTUS CDS 259999 260168 0.92 - 0 ID=LTnewLM_140012600.1:CDS:2;Parent=LTnewLM_140012600.1 ### LTnewLM_14 . polypeptide 259268 260168 . - . ID=LTnewLM_140012600.1:pep;Derives_from=LTnewLM_140012600.1;orthologous_to=LTnewLM_140012500.1,LTnewLM_140012700.1,LmjF.14.0680_mRNA;ortholog_cluster=OG0000122;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 259404 260123 . - . Parent=LTnewLM_140012600.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 262149 263048 1 - . ID=LTnewLM_140012700 LTnewLM_14 AUGUSTUS mRNA 262149 263048 1 - . ID=LTnewLM_140012700.1;Parent=LTnewLM_140012700 LTnewLM_14 AUGUSTUS CDS 262149 263048 1 - 0 ID=LTnewLM_140012700.1:CDS:1;Parent=LTnewLM_140012700.1 ### LTnewLM_14 . polypeptide 262149 263048 . - . ID=LTnewLM_140012700.1:pep;Derives_from=LTnewLM_140012700.1;orthologous_to=LTnewLM_140012500.1,LTnewLM_140012600.1,LmjF.14.0680_mRNA;ortholog_cluster=OG0000122;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 262227 263003 . - . Parent=LTnewLM_140012700.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 . pseudogene 264471 265553 . - . ID=LTnewLM_140012800:pseudogene;coverage=0.997;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.0690_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 264471 265553 . - . ID=LTnewLM_140012800.1;Parent=LTnewLM_140012800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 264471 265553 . - . ID=LTnewLM_140012800.1:pseudogenic_exon:1;Parent=LTnewLM_140012800.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 264471 265553 . - . ID=LTnewLM_140012800.1:pep;Derives_from=LTnewLM_140012800.1;orthologous_to=LmjF.14.0690_mRNA;ortholog_cluster=OG0007451;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 264723 265499 . - . Parent=LTnewLM_140012800.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 270021 271001 1 - . ID=LTnewLM_140012900 LTnewLM_14 AUGUSTUS mRNA 270021 271001 1 - . ID=LTnewLM_140012900.1;Parent=LTnewLM_140012900 LTnewLM_14 AUGUSTUS CDS 270021 271001 1 - 0 ID=LTnewLM_140012900.1:CDS:1;Parent=LTnewLM_140012900.1 ### LTnewLM_14 . polypeptide 270021 271001 . - . ID=LTnewLM_140012900.1:pep;Derives_from=LTnewLM_140012900.1;orthologous_to=LmjF.14.0700_mRNA;ortholog_cluster=OG0001116;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 270066 270872 . - . Parent=LTnewLM_140012900.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 276680 277651 1 - . ID=LTnewLM_140013000 LTnewLM_14 AUGUSTUS mRNA 276680 277651 1 - . ID=LTnewLM_140013000.1;Parent=LTnewLM_140013000 LTnewLM_14 AUGUSTUS CDS 276680 277651 1 - 0 ID=LTnewLM_140013000.1:CDS:1;Parent=LTnewLM_140013000.1 ### LTnewLM_14 . polypeptide 276680 277651 . - . ID=LTnewLM_140013000.1:pep;Derives_from=LTnewLM_140013000.1;orthologous_to=LmjF.14.0705_mRNA;ortholog_cluster=OG0001117;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 276740 277585 . - . Parent=LTnewLM_140013000.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 282184 283311 1 - . ID=LTnewLM_140013100 LTnewLM_14 AUGUSTUS mRNA 282184 283311 1 - . ID=LTnewLM_140013100.1;Parent=LTnewLM_140013100 LTnewLM_14 AUGUSTUS CDS 282184 283311 1 - 0 ID=LTnewLM_140013100.1:CDS:1;Parent=LTnewLM_140013100.1 ### LTnewLM_14 . polypeptide 282184 283311 . - . ID=LTnewLM_140013100.1:pep;Derives_from=LTnewLM_140013100.1;orthologous_to=LmjF.14.0710_mRNA;ortholog_cluster=OG0001118;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 282241 283233 . - . Parent=LTnewLM_140013100.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 285591 286715 1 - . ID=LTnewLM_140013200 LTnewLM_14 AUGUSTUS mRNA 285591 286715 1 - . ID=LTnewLM_140013200.1;Parent=LTnewLM_140013200 LTnewLM_14 AUGUSTUS CDS 285591 286715 1 - 0 ID=LTnewLM_140013200.1:CDS:1;Parent=LTnewLM_140013200.1 ### LTnewLM_14 . polypeptide 285591 286715 . - . ID=LTnewLM_140013200.1:pep;Derives_from=LTnewLM_140013200.1;orthologous_to=LmjF.14.0720_mRNA;ortholog_cluster=OG0001119;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 285648 286637 . - . Parent=LTnewLM_140013200.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 289621 290824 0.9 - . ID=LTnewLM_140013300 LTnewLM_14 AUGUSTUS mRNA 289621 290824 0.9 - . ID=LTnewLM_140013300.1;Parent=LTnewLM_140013300 LTnewLM_14 AUGUSTUS CDS 289621 289996 0.97 - 1 ID=LTnewLM_140013300.1:CDS:1;Parent=LTnewLM_140013300.1 LTnewLM_14 AUGUSTUS CDS 290043 290824 0.9 - 0 ID=LTnewLM_140013300.1:CDS:2;Parent=LTnewLM_140013300.1 ### LTnewLM_14 . polypeptide 289621 290824 . - . ID=LTnewLM_140013300.1:pep;Derives_from=LTnewLM_140013300.1;orthologous_to=LmjF.14.0730_mRNA;ortholog_cluster=OG0001120;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 289793 290743 . - . Parent=LTnewLM_140013300.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 297234 298145 1 - . ID=LTnewLM_140013400 LTnewLM_14 AUGUSTUS mRNA 297234 298145 1 - . ID=LTnewLM_140013400.1;Parent=LTnewLM_140013400 LTnewLM_14 AUGUSTUS CDS 297234 298145 1 - 0 ID=LTnewLM_140013400.1:CDS:1;Parent=LTnewLM_140013400.1 ### LTnewLM_14 . polypeptide 297234 298145 . - . ID=LTnewLM_140013400.1:pep;Derives_from=LTnewLM_140013400.1;orthologous_to=LmjF.14.0740_mRNA;ortholog_cluster=OG0001121;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_14 Pfam protein_match 297351 298058 . - . Parent=LTnewLM_140013400.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_14 AUGUSTUS gene 299860 305727 1 - . ID=LTnewLM_140013500 LTnewLM_14 AUGUSTUS mRNA 299860 305727 1 - . ID=LTnewLM_140013500.1;Parent=LTnewLM_140013500 LTnewLM_14 AUGUSTUS CDS 299860 305727 1 - 0 ID=LTnewLM_140013500.1:CDS:1;Parent=LTnewLM_140013500.1 ### LTnewLM_14 . polypeptide 299860 305727 . - . ID=LTnewLM_140013500.1:pep;Derives_from=LTnewLM_140013500.1;orthologous_to=LmjF.14.0750_mRNA;ortholog_cluster=OG0001122;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 306605 307771 1 - . ID=LTnewLM_140013600 LTnewLM_14 AUGUSTUS mRNA 306605 307771 1 - . ID=LTnewLM_140013600.1;Parent=LTnewLM_140013600 LTnewLM_14 AUGUSTUS CDS 306605 307771 1 - 0 ID=LTnewLM_140013600.1:CDS:1;Parent=LTnewLM_140013600.1 ### LTnewLM_14 . polypeptide 306605 307771 . - . ID=LTnewLM_140013600.1:pep;Derives_from=LTnewLM_140013600.1;orthologous_to=LmjF.14.0760_mRNA;ortholog_cluster=OG0001123;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_14 Pfam protein_match 307007 307534 . - . Parent=LTnewLM_140013600.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_14 Pfam protein_match 307013 307534 . - . Parent=LTnewLM_140013600.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_14 Pfam protein_match 307013 307543 . - . Parent=LTnewLM_140013600.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_14 Pfam protein_match 307172 307534 . - . Parent=LTnewLM_140013600.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_14 AUGUSTUS gene 310477 311763 1 - . ID=LTnewLM_140013700 LTnewLM_14 AUGUSTUS mRNA 310477 311763 1 - . ID=LTnewLM_140013700.1;Parent=LTnewLM_140013700 LTnewLM_14 AUGUSTUS CDS 310477 311763 1 - 0 ID=LTnewLM_140013700.1:CDS:1;Parent=LTnewLM_140013700.1 ### LTnewLM_14 . polypeptide 310477 311763 . - . ID=LTnewLM_140013700.1:pep;Derives_from=LTnewLM_140013700.1;orthologous_to=LmjF.14.0770_mRNA;ortholog_cluster=OG0001124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 312649 313209 1 - . ID=LTnewLM_140013800 LTnewLM_14 AUGUSTUS mRNA 312649 313209 1 - . ID=LTnewLM_140013800.1;Parent=LTnewLM_140013800 LTnewLM_14 AUGUSTUS CDS 312649 313209 1 - 0 ID=LTnewLM_140013800.1:CDS:1;Parent=LTnewLM_140013800.1 ### LTnewLM_14 . polypeptide 312649 313209 . - . ID=LTnewLM_140013800.1:pep;Derives_from=LTnewLM_140013800.1;orthologous_to=LmjF.14.0780_mRNA;ortholog_cluster=OG0001125;product=term%3DRibosomal prokaryotic L21 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00829;Ontology_term=GO:0005840 LTnewLM_14 Pfam protein_match 312853 313146 . - . Parent=LTnewLM_140013800.1:pep;Name=PF00829;signature_desc=Ribosomal prokaryotic L21 protein;Ontology_term=GO:0005840 ### LTnewLM_14 AUGUSTUS gene 313861 326508 1 - . ID=LTnewLM_140013900 LTnewLM_14 AUGUSTUS mRNA 313861 326508 1 - . ID=LTnewLM_140013900.1;Parent=LTnewLM_140013900 LTnewLM_14 AUGUSTUS CDS 313861 326508 1 - 0 ID=LTnewLM_140013900.1:CDS:1;Parent=LTnewLM_140013900.1 ### LTnewLM_14 . polypeptide 313861 326508 . - . ID=LTnewLM_140013900.1:pep;Derives_from=LTnewLM_140013900.1;orthologous_to=LmjF.14.0790_mRNA;ortholog_cluster=OG0001126;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 329211 330500 1 - . ID=LTnewLM_140014000 LTnewLM_14 AUGUSTUS mRNA 329211 330500 1 - . ID=LTnewLM_140014000.1;Parent=LTnewLM_140014000 LTnewLM_14 AUGUSTUS CDS 329211 330500 1 - 0 ID=LTnewLM_140014000.1:CDS:1;Parent=LTnewLM_140014000.1 ### LTnewLM_14 . polypeptide 329211 330500 . - . ID=LTnewLM_140014000.1:pep;Derives_from=LTnewLM_140014000.1;orthologous_to=LmjF.14.0800_mRNA;ortholog_cluster=OG0001127;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 332867 336790 1 - . ID=LTnewLM_140014100 LTnewLM_14 AUGUSTUS mRNA 332867 336790 1 - . ID=LTnewLM_140014100.1;Parent=LTnewLM_140014100 LTnewLM_14 AUGUSTUS CDS 332867 336790 1 - 0 ID=LTnewLM_140014100.1:CDS:1;Parent=LTnewLM_140014100.1 ### LTnewLM_14 . polypeptide 332867 336790 . - . ID=LTnewLM_140014100.1:pep;Derives_from=LTnewLM_140014100.1;orthologous_to=LmjF.14.0810_mRNA;ortholog_cluster=OG0001128;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_14 Pfam protein_match 335048 336025 . - . Parent=LTnewLM_140014100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_14 Pfam protein_match 335717 336019 . - . Parent=LTnewLM_140014100.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_14 AUGUSTUS gene 338017 339750 1 - . ID=LTnewLM_140014200 LTnewLM_14 AUGUSTUS mRNA 338017 339750 1 - . ID=LTnewLM_140014200.1;Parent=LTnewLM_140014200 LTnewLM_14 AUGUSTUS CDS 338017 339750 1 - 0 ID=LTnewLM_140014200.1:CDS:1;Parent=LTnewLM_140014200.1 ### LTnewLM_14 . polypeptide 338017 339750 . - . ID=LTnewLM_140014200.1:pep;Derives_from=LTnewLM_140014200.1;orthologous_to=LmjF.14.0820_mRNA;ortholog_cluster=OG0001129;product=term%3DDomain of unknown function (DUF4201)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13870 LTnewLM_14 Pfam protein_match 338338 338847 . - . Parent=LTnewLM_140014200.1:pep;Name=PF13870;signature_desc=Domain of unknown function (DUF4201) ### LTnewLM_14 AUGUSTUS gene 341073 344051 1 - . ID=LTnewLM_140014300 LTnewLM_14 AUGUSTUS mRNA 341073 344051 1 - . ID=LTnewLM_140014300.1;Parent=LTnewLM_140014300 LTnewLM_14 AUGUSTUS CDS 341073 344051 1 - 0 ID=LTnewLM_140014300.1:CDS:1;Parent=LTnewLM_140014300.1 ### LTnewLM_14 . polypeptide 341073 344051 . - . ID=LTnewLM_140014300.1:pep;Derives_from=LTnewLM_140014300.1;orthologous_to=LmjF.14.0830_mRNA;ortholog_cluster=OG0001130;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_14 Pfam protein_match 341199 341834 . - . Parent=LTnewLM_140014300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_14 Pfam protein_match 342186 342659 . - . Parent=LTnewLM_140014300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_14 Pfam protein_match 342198 342650 . - . Parent=LTnewLM_140014300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_14 AUGUSTUS gene 346142 349927 1 - . ID=LTnewLM_140014400 LTnewLM_14 AUGUSTUS mRNA 346142 349927 1 - . ID=LTnewLM_140014400.1;Parent=LTnewLM_140014400 LTnewLM_14 AUGUSTUS CDS 346142 349927 1 - 0 ID=LTnewLM_140014400.1:CDS:1;Parent=LTnewLM_140014400.1 ### LTnewLM_14 . polypeptide 346142 349927 . - . ID=LTnewLM_140014400.1:pep;Derives_from=LTnewLM_140014400.1;orthologous_to=LmjF.14.0840_mRNA;ortholog_cluster=OG0001131;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_14 Pfam protein_match 347009 347344 . - . Parent=LTnewLM_140014400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_14 Pfam protein_match 347498 348442 . - . Parent=LTnewLM_140014400.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_14 Pfam protein_match 348014 348493 . - . Parent=LTnewLM_140014400.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_14 AUGUSTUS gene 352889 353236 1 - . ID=LTnewLM_140014500 LTnewLM_14 AUGUSTUS mRNA 352889 353236 1 - . ID=LTnewLM_140014500.1;Parent=LTnewLM_140014500 LTnewLM_14 AUGUSTUS CDS 352889 353236 1 - 0 ID=LTnewLM_140014500.1:CDS:1;Parent=LTnewLM_140014500.1 ### LTnewLM_14 . polypeptide 352889 353236 . - . ID=LTnewLM_140014500.1:pep;Derives_from=LTnewLM_140014500.1;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_14 Pfam protein_match 352913 353215 . - . Parent=LTnewLM_140014500.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_14 AUGUSTUS gene 355566 355913 1 - . ID=LTnewLM_140014600 LTnewLM_14 AUGUSTUS mRNA 355566 355913 1 - . ID=LTnewLM_140014600.1;Parent=LTnewLM_140014600 LTnewLM_14 AUGUSTUS CDS 355566 355913 1 - 0 ID=LTnewLM_140014600.1:CDS:1;Parent=LTnewLM_140014600.1 ### LTnewLM_14 . polypeptide 355566 355913 . - . ID=LTnewLM_140014600.1:pep;Derives_from=LTnewLM_140014600.1;orthologous_to=LmjF.14.0850_mRNA;ortholog_cluster=OG0001132;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_14 Pfam protein_match 355590 355892 . - . Parent=LTnewLM_140014600.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_14 AUGUSTUS gene 356416 356616 1 - . ID=LTnewLM_140014700 LTnewLM_14 AUGUSTUS mRNA 356416 356616 1 - . ID=LTnewLM_140014700.1;Parent=LTnewLM_140014700 LTnewLM_14 AUGUSTUS CDS 356416 356616 1 - 0 ID=LTnewLM_140014700.1:CDS:1;Parent=LTnewLM_140014700.1 ### LTnewLM_14 . polypeptide 356416 356616 . - . ID=LTnewLM_140014700.1:pep;Derives_from=LTnewLM_140014700.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 357710 358535 0.69 - . ID=LTnewLM_140014800 LTnewLM_14 AUGUSTUS mRNA 357710 358535 0.69 - . ID=LTnewLM_140014800.1;Parent=LTnewLM_140014800 LTnewLM_14 AUGUSTUS CDS 357710 357736 0.69 - 0 ID=LTnewLM_140014800.1:CDS:1;Parent=LTnewLM_140014800.1 LTnewLM_14 AUGUSTUS CDS 357867 358535 1 - 0 ID=LTnewLM_140014800.1:CDS:2;Parent=LTnewLM_140014800.1 ### LTnewLM_14 . polypeptide 357710 358535 . - . ID=LTnewLM_140014800.1:pep;Derives_from=LTnewLM_140014800.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 358585 360216 1 - . ID=LTnewLM_140014900 LTnewLM_14 AUGUSTUS mRNA 358585 360216 1 - . ID=LTnewLM_140014900.1;Parent=LTnewLM_140014900 LTnewLM_14 AUGUSTUS CDS 358585 360216 1 - 0 ID=LTnewLM_140014900.1:CDS:1;Parent=LTnewLM_140014900.1 ### LTnewLM_14 . polypeptide 358585 360216 . - . ID=LTnewLM_140014900.1:pep;Derives_from=LTnewLM_140014900.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 360285 360753 0.77 - . ID=LTnewLM_140015000 LTnewLM_14 AUGUSTUS mRNA 360285 360753 0.77 - . ID=LTnewLM_140015000.1;Parent=LTnewLM_140015000 LTnewLM_14 AUGUSTUS CDS 360285 360288 0.78 - 1 ID=LTnewLM_140015000.1:CDS:1;Parent=LTnewLM_140015000.1 LTnewLM_14 AUGUSTUS CDS 360344 360753 0.99 - 0 ID=LTnewLM_140015000.1:CDS:2;Parent=LTnewLM_140015000.1 ### LTnewLM_14 . polypeptide 360285 360753 . - . ID=LTnewLM_140015000.1:pep;Derives_from=LTnewLM_140015000.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 361561 364764 1 - . ID=LTnewLM_140015100 LTnewLM_14 AUGUSTUS mRNA 361561 364764 1 - . ID=LTnewLM_140015100.1;Parent=LTnewLM_140015100 LTnewLM_14 AUGUSTUS CDS 361561 364764 1 - 0 ID=LTnewLM_140015100.1:CDS:1;Parent=LTnewLM_140015100.1 ### LTnewLM_14 . polypeptide 361561 364764 . - . ID=LTnewLM_140015100.1:pep;Derives_from=LTnewLM_140015100.1;orthologous_to=LmjF.14.0880_mRNA;ortholog_cluster=OG0001133;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 365818 367791 1 - . ID=LTnewLM_140015200 LTnewLM_14 AUGUSTUS mRNA 365818 367791 1 - . ID=LTnewLM_140015200.1;Parent=LTnewLM_140015200 LTnewLM_14 AUGUSTUS CDS 365818 367791 1 - 0 ID=LTnewLM_140015200.1:CDS:1;Parent=LTnewLM_140015200.1 ### LTnewLM_14 . polypeptide 365818 367791 . - . ID=LTnewLM_140015200.1:pep;Derives_from=LTnewLM_140015200.1;orthologous_to=LmjF.14.0890_mRNA;ortholog_cluster=OG0001134;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . polypeptide 371227 373554 . - . ID=LTnewLM_140015300.1:pep;Derives_from=LTnewLM_140015300.1;orthologous_to=LTnewLM_140015300.2,LmjF.14.0900.1_mRNA,LmjF.14.0900.2_mRNA;ortholog_cluster=OG0000123;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481|Pfam:PF13672;Ontology_term=GO:0003824 LTnewLM_14 Pfam protein_match 371458 372474 . - . Parent=LTnewLM_140015300.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 LTnewLM_14 Pfam protein_match 371995 372408 . - . Parent=LTnewLM_140015300.1:pep;Name=PF13672;signature_desc=Protein phosphatase 2C ### LTnewLM_14 . polypeptide 371227 374139 . - . ID=LTnewLM_140015300.2:pep;Derives_from=LTnewLM_140015300.2;orthologous_to=LTnewLM_140015300.1,LmjF.14.0900.1_mRNA,LmjF.14.0900.2_mRNA;ortholog_cluster=OG0000123;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481|Pfam:PF13672;Ontology_term=GO:0003824 LTnewLM_14 Pfam protein_match 371458 372474 . - . Parent=LTnewLM_140015300.2:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 LTnewLM_14 Pfam protein_match 371995 372408 . - . Parent=LTnewLM_140015300.2:pep;Name=PF13672;signature_desc=Protein phosphatase 2C ### LTnewLM_14 Liftoff gene 371227 376292 . - . ID=LTnewLM_140015300;coverage=0.985;sequence_ID=0.914;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.14.0900_0 LTnewLM_14 Liftoff mRNA 371227 373643 . - . ID=LTnewLM_140015300.1;Parent=LTnewLM_140015300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 371227 373554 . - 0 ID=LTnewLM_140015300.1:CDS:1;Parent=LTnewLM_140015300.1;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 373555 373643 . - . ID=LTnewLM_140015300:five_prime_UTR;Parent=LTnewLM_140015300.1;extra_copy_number=0 LTnewLM_14 Liftoff mRNA 371227 376292 . - . ID=LTnewLM_140015300.2;Parent=LTnewLM_140015300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 371227 374139 . - 0 ID=LTnewLM_140015300.2:CDS:1;Parent=LTnewLM_140015300.2;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 374140 376292 . - . ID=LTnewLM_140015300:five_prime_UTR.1;Parent=LTnewLM_140015300.2;extra_copy_number=0 ### LTnewLM_14 AUGUSTUS gene 377025 377249 1 - . ID=LTnewLM_140015400 LTnewLM_14 AUGUSTUS mRNA 377025 377249 1 - . ID=LTnewLM_140015400.1;Parent=LTnewLM_140015400 LTnewLM_14 AUGUSTUS CDS 377025 377249 1 - 0 ID=LTnewLM_140015400.1:CDS:1;Parent=LTnewLM_140015400.1 ### LTnewLM_14 . polypeptide 377025 377249 . - . ID=LTnewLM_140015400.1:pep;Derives_from=LTnewLM_140015400.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 381287 383107 1 - . ID=LTnewLM_140015500 LTnewLM_14 AUGUSTUS mRNA 381287 383107 1 - . ID=LTnewLM_140015500.1;Parent=LTnewLM_140015500 LTnewLM_14 AUGUSTUS CDS 381287 383107 1 - 0 ID=LTnewLM_140015500.1:CDS:1;Parent=LTnewLM_140015500.1 ### LTnewLM_14 . polypeptide 381287 383107 . - . ID=LTnewLM_140015500.1:pep;Derives_from=LTnewLM_140015500.1;orthologous_to=LmjF.14.0910_mRNA;ortholog_cluster=OG0001135;product=term%3DEukaryotic glutathione synthase%2C ATP binding domain/Eukaryotic glutathione synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03917|Pfam:PF03199;Ontology_term=GO:0004363,GO:0006750,GO:0005524 LTnewLM_14 Pfam protein_match 381305 382984 . - . Parent=LTnewLM_140015500.1:pep;Name=PF03917;signature_desc=Eukaryotic glutathione synthase%2C ATP binding domain;Ontology_term=GO:0004363,GO:0005524,GO:0006750 LTnewLM_14 Pfam protein_match 381893 382261 . - . Parent=LTnewLM_140015500.1:pep;Name=PF03199;signature_desc=Eukaryotic glutathione synthase;Ontology_term=GO:0004363,GO:0005524,GO:0006750 ### LTnewLM_14 AUGUSTUS gene 384012 389321 1 - . ID=LTnewLM_140015600 LTnewLM_14 AUGUSTUS mRNA 384012 389321 1 - . ID=LTnewLM_140015600.1;Parent=LTnewLM_140015600 LTnewLM_14 AUGUSTUS CDS 384012 389321 1 - 0 ID=LTnewLM_140015600.1:CDS:1;Parent=LTnewLM_140015600.1 ### LTnewLM_14 . polypeptide 384012 389321 . - . ID=LTnewLM_140015600.1:pep;Derives_from=LTnewLM_140015600.1;orthologous_to=LmjF.14.0920_mRNA;ortholog_cluster=OG0001136;product=term%3DDNA polymerase family A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00476;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_14 Pfam protein_match 384030 385004 . - . Parent=LTnewLM_140015600.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_14 AUGUSTUS gene 391716 394301 1 - . ID=LTnewLM_140015700 LTnewLM_14 AUGUSTUS mRNA 391716 394301 1 - . ID=LTnewLM_140015700.1;Parent=LTnewLM_140015700 LTnewLM_14 AUGUSTUS CDS 391716 394301 1 - 0 ID=LTnewLM_140015700.1:CDS:1;Parent=LTnewLM_140015700.1 ### LTnewLM_14 . polypeptide 391716 394301 . - . ID=LTnewLM_140015700.1:pep;Derives_from=LTnewLM_140015700.1;orthologous_to=LmjF.14.0930_mRNA;ortholog_cluster=OG0001137;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 396933 400301 1 - . ID=LTnewLM_140015800 LTnewLM_14 AUGUSTUS mRNA 396933 400301 1 - . ID=LTnewLM_140015800.1;Parent=LTnewLM_140015800 LTnewLM_14 AUGUSTUS CDS 396933 400301 1 - 0 ID=LTnewLM_140015800.1:CDS:1;Parent=LTnewLM_140015800.1 ### LTnewLM_14 . polypeptide 396933 400301 . - . ID=LTnewLM_140015800.1:pep;Derives_from=LTnewLM_140015800.1;orthologous_to=LmjF.14.0940_mRNA;ortholog_cluster=OG0001138;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 402020 402526 1 - . ID=LTnewLM_140015900 LTnewLM_14 AUGUSTUS mRNA 402020 402526 1 - . ID=LTnewLM_140015900.1;Parent=LTnewLM_140015900 LTnewLM_14 AUGUSTUS CDS 402020 402526 1 - 0 ID=LTnewLM_140015900.1:CDS:1;Parent=LTnewLM_140015900.1 ### LTnewLM_14 . polypeptide 402020 402526 . - . ID=LTnewLM_140015900.1:pep;Derives_from=LTnewLM_140015900.1;orthologous_to=LmjF.14.0950_mRNA;ortholog_cluster=OG0001139;product=term%3DRibosomal protein L16p/L10e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00252;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_14 Pfam protein_match 402062 402397 . - . Parent=LTnewLM_140015900.1:pep;Name=PF00252;signature_desc=Ribosomal protein L16p/L10e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_14 AUGUSTUS gene 403796 407140 1 - . ID=LTnewLM_140016000 LTnewLM_14 AUGUSTUS mRNA 403796 407140 1 - . ID=LTnewLM_140016000.1;Parent=LTnewLM_140016000 LTnewLM_14 AUGUSTUS CDS 403796 407140 1 - 0 ID=LTnewLM_140016000.1:CDS:1;Parent=LTnewLM_140016000.1 ### LTnewLM_14 . polypeptide 403796 407140 . - . ID=LTnewLM_140016000.1:pep;Derives_from=LTnewLM_140016000.1;orthologous_to=LmjF.14.0960_mRNA;ortholog_cluster=OG0001140;product=term%3DCid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03828 LTnewLM_14 Pfam protein_match 405071 405184 . - . Parent=LTnewLM_140016000.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase ### LTnewLM_14 . polypeptide 409330 410193 . - . ID=LTnewLM_140016100.1:pep;Derives_from=LTnewLM_140016100.1;orthologous_to=LmjF.14.0970.2_mRNA;ortholog_cluster=OG0007452;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . polypeptide 409330 410345 . - . ID=LTnewLM_140016100.2:pep;Derives_from=LTnewLM_140016100.2;product=term%3Dhypothetical protein ### LTnewLM_14 . pseudogene 409330 410357 . - . ID=LTnewLM_140016100:pseudogene;coverage=1.0;sequence_ID=0.952;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.14.0970_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 409330 410264 . - . ID=LTnewLM_140016100.1;Parent=LTnewLM_140016100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 409330 410193 . - . ID=LTnewLM_140016100.1:pseudogenic_exon:1;Parent=LTnewLM_140016100.1;extra_copy_number=0 LTnewLM_14 . pseudogenic_transcript 409330 410357 . - . ID=LTnewLM_140016100.2;Parent=LTnewLM_140016100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 409330 410345 . - . ID=LTnewLM_140016100.2:pseudogenic_exon:1;Parent=LTnewLM_140016100.2;extra_copy_number=0 ### LTnewLM_14 AUGUSTUS gene 415370 418015 1.93 - . ID=LTnewLM_140016200 LTnewLM_14 AUGUSTUS mRNA 415370 418015 1 - . ID=LTnewLM_140016200.1;Parent=LTnewLM_140016200 LTnewLM_14 AUGUSTUS CDS 415370 418015 1 - 0 ID=LTnewLM_140016200.1:CDS:1;Parent=LTnewLM_140016200.1 LTnewLM_14 AUGUSTUS mRNA 415669 418015 0.93 - . ID=LTnewLM_140016200.2;Parent=LTnewLM_140016200 LTnewLM_14 AUGUSTUS CDS 415669 415677 0.93 - 0 ID=LTnewLM_140016200.2:CDS:1;Parent=LTnewLM_140016200.2 LTnewLM_14 AUGUSTUS CDS 415730 418015 0.98 - 0 ID=LTnewLM_140016200.2:CDS:2;Parent=LTnewLM_140016200.2 ### LTnewLM_14 . polypeptide 415370 418015 . - . ID=LTnewLM_140016200.1:pep;Derives_from=LTnewLM_140016200.1;orthologous_to=LTnewLM_140016200.2,LmjF.14.0980_mRNA;ortholog_cluster=OG0000333;product=term%3DSodium/hydrogen exchanger family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00999;Ontology_term=GO:0006812,GO:0015299,GO:0055085,GO:0016021 LTnewLM_14 Pfam protein_match 415703 416965 . - . Parent=LTnewLM_140016200.1:pep;Name=PF00999;signature_desc=Sodium/hydrogen exchanger family;Ontology_term=GO:0015299,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_14 . polypeptide 415669 418015 . - . ID=LTnewLM_140016200.2:pep;Derives_from=LTnewLM_140016200.2;orthologous_to=LTnewLM_140016200.1,LmjF.14.0980_mRNA;ortholog_cluster=OG0000333;product=term%3DSodium/hydrogen exchanger family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00999;Ontology_term=GO:0006812,GO:0015299,GO:0055085,GO:0016021 LTnewLM_14 Pfam protein_match 415865 416965 . - . Parent=LTnewLM_140016200.2:pep;Name=PF00999;signature_desc=Sodium/hydrogen exchanger family;Ontology_term=GO:0015299,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_14 AUGUSTUS gene 419237 420367 1 - . ID=LTnewLM_140016300 LTnewLM_14 AUGUSTUS mRNA 419237 420367 1 - . ID=LTnewLM_140016300.1;Parent=LTnewLM_140016300 LTnewLM_14 AUGUSTUS CDS 419237 420367 1 - 0 ID=LTnewLM_140016300.1:CDS:1;Parent=LTnewLM_140016300.1 ### LTnewLM_14 . polypeptide 419237 420367 . - . ID=LTnewLM_140016300.1:pep;Derives_from=LTnewLM_140016300.1;orthologous_to=LmjF.14.0990_mRNA;ortholog_cluster=OG0001141;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_14 Pfam protein_match 419267 419476 . - . Parent=LTnewLM_140016300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_14 Pfam protein_match 419540 419896 . - . Parent=LTnewLM_140016300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_14 AUGUSTUS gene 421786 422070 1 - . ID=LTnewLM_140016400 LTnewLM_14 AUGUSTUS mRNA 421786 422070 1 - . ID=LTnewLM_140016400.1;Parent=LTnewLM_140016400 LTnewLM_14 AUGUSTUS CDS 421786 422070 1 - 0 ID=LTnewLM_140016400.1:CDS:1;Parent=LTnewLM_140016400.1 ### LTnewLM_14 . polypeptide 421786 422070 . - . ID=LTnewLM_140016400.1:pep;Derives_from=LTnewLM_140016400.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 422484 423794 1 - . ID=LTnewLM_140016500 LTnewLM_14 AUGUSTUS mRNA 422484 423794 1 - . ID=LTnewLM_140016500.1;Parent=LTnewLM_140016500 LTnewLM_14 AUGUSTUS CDS 422484 423794 1 - 0 ID=LTnewLM_140016500.1:CDS:1;Parent=LTnewLM_140016500.1 ### LTnewLM_14 . polypeptide 422484 423794 . - . ID=LTnewLM_140016500.1:pep;Derives_from=LTnewLM_140016500.1;orthologous_to=LmjF.14.1000_mRNA;ortholog_cluster=OG0001142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 . pseudogene 424183 427353 . - . ID=LTnewLM_140016600:pseudogene;coverage=0.999;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.1010_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 424183 427353 . - . ID=LTnewLM_140016600.1;Parent=LTnewLM_140016600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 424183 427353 . - . ID=LTnewLM_140016600.1:pseudogenic_exon:1;Parent=LTnewLM_140016600.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 424183 427353 . - . ID=LTnewLM_140016600.1:pep;Derives_from=LTnewLM_140016600.1;orthologous_to=LmjF.14.1010_mRNA;ortholog_cluster=OG0007453;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 428706 429650 1 - . ID=LTnewLM_140016700 LTnewLM_14 AUGUSTUS mRNA 428706 429650 1 - . ID=LTnewLM_140016700.1;Parent=LTnewLM_140016700 LTnewLM_14 AUGUSTUS CDS 428706 429650 1 - 0 ID=LTnewLM_140016700.1:CDS:1;Parent=LTnewLM_140016700.1 ### LTnewLM_14 . polypeptide 428706 429650 . - . ID=LTnewLM_140016700.1:pep;Derives_from=LTnewLM_140016700.1;orthologous_to=LmjF.14.1020_mRNA;ortholog_cluster=OG0001143;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 430338 431855 1 - . ID=LTnewLM_140016800 LTnewLM_14 AUGUSTUS mRNA 430338 431855 1 - . ID=LTnewLM_140016800.1;Parent=LTnewLM_140016800 LTnewLM_14 AUGUSTUS CDS 430338 431855 1 - 0 ID=LTnewLM_140016800.1:CDS:1;Parent=LTnewLM_140016800.1 ### LTnewLM_14 . polypeptide 430338 431855 . - . ID=LTnewLM_140016800.1:pep;Derives_from=LTnewLM_140016800.1;orthologous_to=LmjF.14.1030_mRNA;ortholog_cluster=OG0001144;product=term%3DSulfotransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13469 LTnewLM_14 Pfam protein_match 430875 431498 . - . Parent=LTnewLM_140016800.1:pep;Name=PF13469;signature_desc=Sulfotransferase family ### LTnewLM_14 AUGUSTUS gene 434721 435263 1 - . ID=LTnewLM_140016900 LTnewLM_14 AUGUSTUS mRNA 434721 435263 1 - . ID=LTnewLM_140016900.1;Parent=LTnewLM_140016900 LTnewLM_14 AUGUSTUS CDS 434721 435263 1 - 0 ID=LTnewLM_140016900.1:CDS:1;Parent=LTnewLM_140016900.1 ### LTnewLM_14 . polypeptide 434721 435263 . - . ID=LTnewLM_140016900.1:pep;Derives_from=LTnewLM_140016900.1;orthologous_to=LmjF.14.1040_mRNA;ortholog_cluster=OG0001145;product=term%3DDomain of unknown function (DUF202)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02656 LTnewLM_14 Pfam protein_match 434892 435083 . - . Parent=LTnewLM_140016900.1:pep;Name=PF02656;signature_desc=Domain of unknown function (DUF202) ### LTnewLM_14 AUGUSTUS gene 435907 436530 1 - . ID=LTnewLM_140017000 LTnewLM_14 AUGUSTUS mRNA 435907 436530 1 - . ID=LTnewLM_140017000.1;Parent=LTnewLM_140017000 LTnewLM_14 AUGUSTUS CDS 435907 436530 1 - 0 ID=LTnewLM_140017000.1:CDS:1;Parent=LTnewLM_140017000.1 ### LTnewLM_14 . polypeptide 435907 436530 . - . ID=LTnewLM_140017000.1:pep;Derives_from=LTnewLM_140017000.1;orthologous_to=LmjF.14.1045_mRNA;ortholog_cluster=OG0001146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 438668 439480 1 - . ID=LTnewLM_140017100 LTnewLM_14 AUGUSTUS mRNA 438668 439480 1 - . ID=LTnewLM_140017100.1;Parent=LTnewLM_140017100 LTnewLM_14 AUGUSTUS CDS 438668 439480 1 - 0 ID=LTnewLM_140017100.1:CDS:1;Parent=LTnewLM_140017100.1 ### LTnewLM_14 . polypeptide 438668 439480 . - . ID=LTnewLM_140017100.1:pep;Derives_from=LTnewLM_140017100.1;orthologous_to=LmjF.14.1050_mRNA;ortholog_cluster=OG0001147;product=term%3DCOQ9%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08511 LTnewLM_14 Pfam protein_match 438695 438826 . - . Parent=LTnewLM_140017100.1:pep;Name=PF08511;signature_desc=COQ9 ### LTnewLM_14 AUGUSTUS gene 441686 454492 1 + . ID=LTnewLM_140017200 LTnewLM_14 AUGUSTUS mRNA 441686 454492 1 + . ID=LTnewLM_140017200.1;Parent=LTnewLM_140017200 LTnewLM_14 AUGUSTUS CDS 441686 454492 1 + 0 ID=LTnewLM_140017200.1:CDS:1;Parent=LTnewLM_140017200.1 ### LTnewLM_14 . polypeptide 441686 454492 . + . ID=LTnewLM_140017200.1:pep;Derives_from=LTnewLM_140017200.1;orthologous_to=LmjF.14.1060_mRNA;ortholog_cluster=OG0001148;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_14 Pfam protein_match 443759 444955 . + . Parent=LTnewLM_140017200.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_14 Pfam protein_match 445412 446434 . + . Parent=LTnewLM_140017200.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_14 Pfam protein_match 445523 445885 . + . Parent=LTnewLM_140017200.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_14 Pfam protein_match 447095 447607 . + . Parent=LTnewLM_140017200.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_14 Pfam protein_match 447626 448177 . + . Parent=LTnewLM_140017200.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_14 Pfam protein_match 448286 448549 . + . Parent=LTnewLM_140017200.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_14 Pfam protein_match 448769 449551 . + . Parent=LTnewLM_140017200.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_14 Pfam protein_match 449594 450583 . + . Parent=LTnewLM_140017200.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_14 Pfam protein_match 450665 451342 . + . Parent=LTnewLM_140017200.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_14 Pfam protein_match 452357 452695 . + . Parent=LTnewLM_140017200.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_14 Pfam protein_match 452879 453205 . + . Parent=LTnewLM_140017200.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_14 Pfam protein_match 453488 454474 . + . Parent=LTnewLM_140017200.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_14 AUGUSTUS gene 457341 460457 1 + . ID=LTnewLM_140017300 LTnewLM_14 AUGUSTUS mRNA 457341 460457 1 + . ID=LTnewLM_140017300.1;Parent=LTnewLM_140017300 LTnewLM_14 AUGUSTUS CDS 457341 460457 1 + 0 ID=LTnewLM_140017300.1:CDS:1;Parent=LTnewLM_140017300.1 ### LTnewLM_14 . polypeptide 457341 460457 . + . ID=LTnewLM_140017300.1:pep;Derives_from=LTnewLM_140017300.1;orthologous_to=LmjF.14.1070_mRNA;ortholog_cluster=OG0001149;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_14 Pfam protein_match 459456 459992 . + . Parent=LTnewLM_140017300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_14 Pfam protein_match 459456 460436 . + . Parent=LTnewLM_140017300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_14 Liftoff gene 462523 463926 . + . ID=LTnewLM_140017400;coverage=0.979;sequence_ID=0.921;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.14.1080_0 LTnewLM_14 Liftoff mRNA 462523 463926 . + . ID=LTnewLM_140017400.1;Parent=LTnewLM_140017400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 462523 463926 . + 0 ID=LTnewLM_140017400.1:CDS:1;Parent=LTnewLM_140017400.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 462523 463926 . + . ID=LTnewLM_140017400.1:pep;Derives_from=LTnewLM_140017400.1;orthologous_to=LmjF.14.1080_mRNA;ortholog_cluster=OG0001150;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 464812 465504 1 + . ID=LTnewLM_140017500 LTnewLM_14 AUGUSTUS mRNA 464812 465504 1 + . ID=LTnewLM_140017500.1;Parent=LTnewLM_140017500 LTnewLM_14 AUGUSTUS CDS 464812 465504 1 + 0 ID=LTnewLM_140017500.1:CDS:1;Parent=LTnewLM_140017500.1 ### LTnewLM_14 . polypeptide 464812 465504 . + . ID=LTnewLM_140017500.1:pep;Derives_from=LTnewLM_140017500.1;orthologous_to=LmjF.14.1090_mRNA;ortholog_cluster=OG0001151;product=term%3DPQ loop repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04193 LTnewLM_14 Pfam protein_match 464842 465015 . + . Parent=LTnewLM_140017500.1:pep;Name=PF04193;signature_desc=PQ loop repeat LTnewLM_14 Pfam protein_match 465184 465342 . + . Parent=LTnewLM_140017500.1:pep;Name=PF04193;signature_desc=PQ loop repeat ### LTnewLM_14 AUGUSTUS gene 466514 466894 1 + . ID=LTnewLM_140017600 LTnewLM_14 AUGUSTUS mRNA 466514 466894 1 + . ID=LTnewLM_140017600.1;Parent=LTnewLM_140017600 LTnewLM_14 AUGUSTUS CDS 466514 466894 1 + 0 ID=LTnewLM_140017600.1:CDS:1;Parent=LTnewLM_140017600.1 ### LTnewLM_14 . polypeptide 466514 466894 . + . ID=LTnewLM_140017600.1:pep;Derives_from=LTnewLM_140017600.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 466978 467223 0.99 + . ID=LTnewLM_140017700 LTnewLM_14 AUGUSTUS mRNA 466978 467223 0.99 + . ID=LTnewLM_140017700.1;Parent=LTnewLM_140017700 LTnewLM_14 AUGUSTUS CDS 466978 467223 0.99 + 0 ID=LTnewLM_140017700.1:CDS:1;Parent=LTnewLM_140017700.1 ### LTnewLM_14 . polypeptide 466978 467223 . + . ID=LTnewLM_140017700.1:pep;Derives_from=LTnewLM_140017700.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 467646 468206 0.99 + . ID=LTnewLM_140017800 LTnewLM_14 AUGUSTUS mRNA 467646 468206 0.99 + . ID=LTnewLM_140017800.1;Parent=LTnewLM_140017800 LTnewLM_14 AUGUSTUS CDS 467646 468206 0.99 + 0 ID=LTnewLM_140017800.1:CDS:1;Parent=LTnewLM_140017800.1 ### LTnewLM_14 . polypeptide 467646 468206 . + . ID=LTnewLM_140017800.1:pep;Derives_from=LTnewLM_140017800.1;product=term%3Dhypothetical protein ### LTnewLM_14 . pseudogene 468950 470381 . + . ID=LTnewLM_140017900:pseudogene;coverage=0.996;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.1095_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 468950 470381 . + . ID=LTnewLM_140017900.1;Parent=LTnewLM_140017900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 468950 470381 . + . ID=LTnewLM_140017900.1:pseudogenic_exon:1;Parent=LTnewLM_140017900.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 468950 470381 . + . ID=LTnewLM_140017900.1:pep;Derives_from=LTnewLM_140017900.1;orthologous_to=LmjF.14.1095_mRNA;ortholog_cluster=OG0007454;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 470438 470802 0.98 + . ID=LTnewLM_140018000 LTnewLM_14 AUGUSTUS mRNA 470438 470802 0.98 + . ID=LTnewLM_140018000.1;Parent=LTnewLM_140018000 LTnewLM_14 AUGUSTUS CDS 470438 470736 0.99 + 0 ID=LTnewLM_140018000.1:CDS:1;Parent=LTnewLM_140018000.1 LTnewLM_14 AUGUSTUS CDS 470796 470802 0.99 + 1 ID=LTnewLM_140018000.1:CDS:2;Parent=LTnewLM_140018000.1 ### LTnewLM_14 . polypeptide 470438 470802 . + . ID=LTnewLM_140018000.1:pep;Derives_from=LTnewLM_140018000.1;product=term%3Dhypothetical protein ### LTnewLM_14 AUGUSTUS gene 470879 471652 0.96 + . ID=LTnewLM_140018100 LTnewLM_14 AUGUSTUS mRNA 470879 471652 0.96 + . ID=LTnewLM_140018100.1;Parent=LTnewLM_140018100 LTnewLM_14 AUGUSTUS CDS 470879 471652 0.96 + 0 ID=LTnewLM_140018100.1:CDS:1;Parent=LTnewLM_140018100.1 ### LTnewLM_14 . polypeptide 470879 471652 . + . ID=LTnewLM_140018100.1:pep;Derives_from=LTnewLM_140018100.1;product=term%3Dhypothetical protein ### LTnewLM_14 . pseudogene 472508 483326 . + . ID=LTnewLM_140018200:pseudogene;coverage=0.992;sequence_ID=0.678;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.1100_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 472508 483326 . + . ID=LTnewLM_140018200.1;Parent=LTnewLM_140018200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 472508 483326 . + . ID=LTnewLM_140018200.1:pseudogenic_exon:1;Parent=LTnewLM_140018200.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 472508 483326 . + . ID=LTnewLM_140018200.1:pep;Derives_from=LTnewLM_140018200.1;orthologous_to=LTnewLM_140018300.1,LTnewLM_140018600.1,LmjF.14.1120_mRNA;ortholog_cluster=OG0000124;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_14 Pfam protein_match 472550 473068 . + . Parent=LTnewLM_140018200.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_14 Pfam protein_match 472559 473680 . + . Parent=LTnewLM_140018200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_14 AUGUSTUS gene 480741 482169 0.51 + . ID=LTnewLM_140018300 LTnewLM_14 AUGUSTUS mRNA 480741 482169 0.51 + . ID=LTnewLM_140018300.1;Parent=LTnewLM_140018300 LTnewLM_14 AUGUSTUS CDS 480741 481741 0.51 + 0 ID=LTnewLM_140018300.1:CDS:1;Parent=LTnewLM_140018300.1 LTnewLM_14 AUGUSTUS CDS 481827 482169 0.51 + 1 ID=LTnewLM_140018300.1:CDS:2;Parent=LTnewLM_140018300.1 ### LTnewLM_14 . polypeptide 480741 482169 . + . ID=LTnewLM_140018300.1:pep;Derives_from=LTnewLM_140018300.1;orthologous_to=LTnewLM_140018200.1,LTnewLM_140018600.1,LmjF.14.1120_mRNA;ortholog_cluster=OG0000124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 482715 483326 1 + . ID=LTnewLM_140018400 LTnewLM_14 AUGUSTUS mRNA 482715 483326 1 + . ID=LTnewLM_140018400.1;Parent=LTnewLM_140018400 LTnewLM_14 AUGUSTUS CDS 482715 483326 1 + 0 ID=LTnewLM_140018400.1:CDS:1;Parent=LTnewLM_140018400.1 ### LTnewLM_14 . polypeptide 482715 483326 . + . ID=LTnewLM_140018400.1:pep;Derives_from=LTnewLM_140018400.1;product=term%3Dhypothetical protein ### LTnewLM_14 . pseudogene 485167 492356 3.06e+03 + . ID=LTnewLM_140018500:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.14.1120:mRNA 17 2469;original_prot_length=3046 LTnewLM_14 . pseudogenic_transcript 485167 492356 . + . ID=LTnewLM_140018500.1;Parent=LTnewLM_140018500:pseudogene LTnewLM_14 . pseudogenic_exon 485167 487497 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:1;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 487499 488149 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:2;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 488152 488556 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:3;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 488559 489059 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:4;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 489062 489109 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:5;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 489111 489377 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:6;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 489379 489435 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:7;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 489438 489809 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:8;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 489811 490239 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:9;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 490242 490979 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:10;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 490990 491505 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:11;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 491508 491720 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:12;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 491723 492151 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:13;Parent=LTnewLM_140018500.1 LTnewLM_14 . pseudogenic_exon 492153 492356 . + . ID=LTnewLM_140018500.1:pseudogenic_exon:14;Parent=LTnewLM_140018500.1 ### LTnewLM_14 . polypeptide 485167 492356 . + . ID=LTnewLM_140018500.1:pep;Derives_from=LTnewLM_140018500.1;orthologous_to=LmjF.14.1100_mRNA,LmjF.14.1110_mRNA;ortholog_cluster=OG0000514;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_14 Pfam protein_match 485245 486393 . + . Parent=LTnewLM_140018500.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_14 Pfam protein_match 485398 485781 . + . Parent=LTnewLM_140018500.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_14 AUGUSTUS gene 495377 498988 1 + . ID=LTnewLM_140018600 LTnewLM_14 AUGUSTUS mRNA 495377 498988 1 + . ID=LTnewLM_140018600.1;Parent=LTnewLM_140018600 LTnewLM_14 AUGUSTUS CDS 495377 498988 1 + 0 ID=LTnewLM_140018600.1:CDS:1;Parent=LTnewLM_140018600.1 ### LTnewLM_14 . polypeptide 495377 498988 . + . ID=LTnewLM_140018600.1:pep;Derives_from=LTnewLM_140018600.1;orthologous_to=LTnewLM_140018200.1,LTnewLM_140018300.1,LmjF.14.1120_mRNA;ortholog_cluster=OG0000124;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_14 Pfam protein_match 495488 495976 . + . Parent=LTnewLM_140018600.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_14 Pfam protein_match 495503 496588 . + . Parent=LTnewLM_140018600.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_14 AUGUSTUS gene 499133 499839 0.85 + . ID=LTnewLM_140018700 LTnewLM_14 AUGUSTUS mRNA 499133 499839 0.85 + . ID=LTnewLM_140018700.1;Parent=LTnewLM_140018700 LTnewLM_14 AUGUSTUS CDS 499133 499721 1 + 0 ID=LTnewLM_140018700.1:CDS:1;Parent=LTnewLM_140018700.1 LTnewLM_14 AUGUSTUS CDS 499784 499839 0.85 + 2 ID=LTnewLM_140018700.1:CDS:2;Parent=LTnewLM_140018700.1 ### LTnewLM_14 . polypeptide 499133 499839 . + . ID=LTnewLM_140018700.1:pep;Derives_from=LTnewLM_140018700.1;orthologous_to=LTnewLM_140018800.1,LTnewLM_140018900.1;ortholog_cluster=OG0000334;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 499941 502485 1 + . ID=LTnewLM_140018800 LTnewLM_14 AUGUSTUS mRNA 499941 502485 1 + . ID=LTnewLM_140018800.1;Parent=LTnewLM_140018800 LTnewLM_14 AUGUSTUS CDS 499941 501898 1 + 0 ID=LTnewLM_140018800.1:CDS:1;Parent=LTnewLM_140018800.1 LTnewLM_14 AUGUSTUS CDS 502014 502485 1 + 1 ID=LTnewLM_140018800.1:CDS:2;Parent=LTnewLM_140018800.1 ### LTnewLM_14 . polypeptide 499941 502485 . + . ID=LTnewLM_140018800.1:pep;Derives_from=LTnewLM_140018800.1;orthologous_to=LTnewLM_140018700.1,LTnewLM_140018900.1;ortholog_cluster=OG0000334;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 503259 512721 0.51 + . ID=LTnewLM_140018900 LTnewLM_14 AUGUSTUS mRNA 503259 512721 0.51 + . ID=LTnewLM_140018900.1;Parent=LTnewLM_140018900 LTnewLM_14 AUGUSTUS CDS 503259 506270 1 + 0 ID=LTnewLM_140018900.1:CDS:1;Parent=LTnewLM_140018900.1 LTnewLM_14 AUGUSTUS CDS 508960 512721 0.51 + 0 ID=LTnewLM_140018900.1:CDS:2;Parent=LTnewLM_140018900.1 ### LTnewLM_14 . polypeptide 503259 512721 . + . ID=LTnewLM_140018900.1:pep;Derives_from=LTnewLM_140018900.1;orthologous_to=LTnewLM_140018700.1,LTnewLM_140018800.1;ortholog_cluster=OG0000334;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 515308 518091 1 + . ID=LTnewLM_140019000 LTnewLM_14 AUGUSTUS mRNA 515308 518091 1 + . ID=LTnewLM_140019000.1;Parent=LTnewLM_140019000 LTnewLM_14 AUGUSTUS CDS 515308 518091 1 + 0 ID=LTnewLM_140019000.1:CDS:1;Parent=LTnewLM_140019000.1 ### LTnewLM_14 . polypeptide 515308 518091 . + . ID=LTnewLM_140019000.1:pep;Derives_from=LTnewLM_140019000.1;orthologous_to=LmjF.14.1130_mRNA;ortholog_cluster=OG0001152;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 Liftoff gene 520350 521897 . + . ID=LTnewLM_140019100;coverage=1.0;sequence_ID=0.943;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.14.1140_0 LTnewLM_14 Liftoff mRNA 520350 521897 . + . ID=LTnewLM_140019100.1;Parent=LTnewLM_140019100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 520350 521897 . + 0 ID=LTnewLM_140019100.1:CDS:1;Parent=LTnewLM_140019100.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 520350 521897 . + . ID=LTnewLM_140019100.1:pep;Derives_from=LTnewLM_140019100.1;orthologous_to=LmjF.14.1140_mRNA;ortholog_cluster=OG0001153;product=term%3D'Cold-shock' DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00313;Ontology_term=GO:0006355,GO:0003677 LTnewLM_14 Pfam protein_match 521550 521708 . + . Parent=LTnewLM_140019100.1:pep;Name=PF00313;signature_desc='Cold-shock' DNA-binding domain;Ontology_term=GO:0003677,GO:0006355 ### LTnewLM_14 AUGUSTUS gene 523174 524724 1 + . ID=LTnewLM_140019200 LTnewLM_14 AUGUSTUS mRNA 523174 524724 1 + . ID=LTnewLM_140019200.1;Parent=LTnewLM_140019200 LTnewLM_14 AUGUSTUS CDS 523174 524724 1 + 0 ID=LTnewLM_140019200.1:CDS:1;Parent=LTnewLM_140019200.1 ### LTnewLM_14 . polypeptide 523174 524724 . + . ID=LTnewLM_140019200.1:pep;Derives_from=LTnewLM_140019200.1;orthologous_to=LmjF.14.1150_mRNA;ortholog_cluster=OG0001154;product=term%3DTub family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01167 LTnewLM_14 Pfam protein_match 523747 524691 . + . Parent=LTnewLM_140019200.1:pep;Name=PF01167;signature_desc=Tub family ### LTnewLM_14 AUGUSTUS gene 527136 528176 1 + . ID=LTnewLM_140019300 LTnewLM_14 AUGUSTUS mRNA 527136 528176 1 + . ID=LTnewLM_140019300.1;Parent=LTnewLM_140019300 LTnewLM_14 AUGUSTUS CDS 527136 528176 1 + 0 ID=LTnewLM_140019300.1:CDS:1;Parent=LTnewLM_140019300.1 ### LTnewLM_14 . polypeptide 527136 528176 . + . ID=LTnewLM_140019300.1:pep;Derives_from=LTnewLM_140019300.1;orthologous_to=LmjF.14.1155_mRNA;ortholog_cluster=OG0001155;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 529112 530401 1 + . ID=LTnewLM_140019400 LTnewLM_14 AUGUSTUS mRNA 529112 530401 1 + . ID=LTnewLM_140019400.1;Parent=LTnewLM_140019400 LTnewLM_14 AUGUSTUS CDS 529112 530401 1 + 0 ID=LTnewLM_140019400.1:CDS:1;Parent=LTnewLM_140019400.1 ### LTnewLM_14 . polypeptide 529112 530401 . + . ID=LTnewLM_140019400.1:pep;Derives_from=LTnewLM_140019400.1;orthologous_to=LmjF.14.1160_mRNA;ortholog_cluster=OG0001156;product=term%3DEnolase%2C N-terminal domain/Enolase%2C C-terminal TIM barrel domain/Enolase C-terminal domain-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03952|Pfam:PF00113|Pfam:PF13378;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015 LTnewLM_14 Pfam protein_match 529118 529504 . + . Parent=LTnewLM_140019400.1:pep;Name=PF03952;signature_desc=Enolase%2C N-terminal domain;Ontology_term=GO:0000287,GO:0004634,GO:0006096,GO:0000015 LTnewLM_14 Pfam protein_match 529535 530377 . + . Parent=LTnewLM_140019400.1:pep;Name=PF00113;signature_desc=Enolase%2C C-terminal TIM barrel domain;Ontology_term=GO:0000287,GO:0004634,GO:0006096,GO:0000015 LTnewLM_14 Pfam protein_match 529793 530266 . + . Parent=LTnewLM_140019400.1:pep;Name=PF13378;signature_desc=Enolase C-terminal domain-like ### LTnewLM_14 AUGUSTUS gene 532697 535285 1 + . ID=LTnewLM_140019500 LTnewLM_14 AUGUSTUS mRNA 532697 535285 1 + . ID=LTnewLM_140019500.1;Parent=LTnewLM_140019500 LTnewLM_14 AUGUSTUS CDS 532697 535285 1 + 0 ID=LTnewLM_140019500.1:CDS:1;Parent=LTnewLM_140019500.1 ### LTnewLM_14 . polypeptide 532697 535285 . + . ID=LTnewLM_140019500.1:pep;Derives_from=LTnewLM_140019500.1;orthologous_to=LmjF.14.1170_mRNA;ortholog_cluster=OG0001157;product=term%3DFYVE zinc finger/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363|Pfam:PF00071;Ontology_term=GO:0005525,GO:0046872,GO:0007264 LTnewLM_14 Pfam protein_match 533078 533602 . + . Parent=LTnewLM_140019500.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_14 Pfam protein_match 534146 534481 . + . Parent=LTnewLM_140019500.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_14 . pseudogene 536679 538792 . + . ID=LTnewLM_140019600:pseudogene;coverage=0.992;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.1180_0;has_internal_stop=true LTnewLM_14 . pseudogenic_transcript 536679 538792 . + . ID=LTnewLM_140019600.1;Parent=LTnewLM_140019600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_14 . pseudogenic_exon 536679 538792 . + . ID=LTnewLM_140019600.1:pseudogenic_exon:1;Parent=LTnewLM_140019600.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 536679 538792 . + . ID=LTnewLM_140019600.1:pep;Derives_from=LTnewLM_140019600.1;orthologous_to=LmjF.14.1180_mRNA;ortholog_cluster=OG0007455;product=term%3DPoly(A) polymerase central domain/Nucleotidyltransferase domain/Poly(A) polymerase predicted RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04928|Pfam:PF01909|Pfam:PF04926;Ontology_term=GO:0003723,GO:0016779,GO:0005634,GO:0043631,GO:0004652 LTnewLM_14 Pfam protein_match 536796 537713 . + . Parent=LTnewLM_140019600.1:pep;Name=PF04928;signature_desc=Poly(A) polymerase central domain;Ontology_term=GO:0004652,GO:0043631 LTnewLM_14 Pfam protein_match 536931 537032 . + . Parent=LTnewLM_140019600.1:pep;Name=PF01909;signature_desc=Nucleotidyltransferase domain;Ontology_term=GO:0016779 LTnewLM_14 Pfam protein_match 537801 538376 . + . Parent=LTnewLM_140019600.1:pep;Name=PF04926;signature_desc=Poly(A) polymerase predicted RNA binding domain;Ontology_term=GO:0003723,GO:0004652,GO:0043631,GO:0005634 ### LTnewLM_14 AUGUSTUS gene 539670 541352 1 + . ID=LTnewLM_140019700 LTnewLM_14 AUGUSTUS mRNA 539670 541352 1 + . ID=LTnewLM_140019700.1;Parent=LTnewLM_140019700 LTnewLM_14 AUGUSTUS CDS 539670 541352 1 + 0 ID=LTnewLM_140019700.1:CDS:1;Parent=LTnewLM_140019700.1 ### LTnewLM_14 . polypeptide 539670 541352 . + . ID=LTnewLM_140019700.1:pep;Derives_from=LTnewLM_140019700.1;orthologous_to=LmjF.14.1190_mRNA;ortholog_cluster=OG0001158;product=term%3DYjeF-related protein N-terminus/Carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03853|Pfam:PF01256;Ontology_term=GO:0052855 LTnewLM_14 Pfam protein_match 539808 540293 . + . Parent=LTnewLM_140019700.1:pep;Name=PF03853;signature_desc=YjeF-related protein N-terminus LTnewLM_14 Pfam protein_match 540483 541271 . + . Parent=LTnewLM_140019700.1:pep;Name=PF01256;signature_desc=Carbohydrate kinase;Ontology_term=GO:0052855 ### LTnewLM_14 AUGUSTUS gene 542075 543670 1 + . ID=LTnewLM_140019800 LTnewLM_14 AUGUSTUS mRNA 542075 543670 1 + . ID=LTnewLM_140019800.1;Parent=LTnewLM_140019800 LTnewLM_14 AUGUSTUS CDS 542075 543670 1 + 0 ID=LTnewLM_140019800.1:CDS:1;Parent=LTnewLM_140019800.1 ### LTnewLM_14 . polypeptide 542075 543670 . + . ID=LTnewLM_140019800.1:pep;Derives_from=LTnewLM_140019800.1;orthologous_to=LmjF.14.1200_mRNA;ortholog_cluster=OG0001159;product=term%3DPhosphatidyl serine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03034;Ontology_term=GO:0006659 LTnewLM_14 Pfam protein_match 542546 543370 . + . Parent=LTnewLM_140019800.1:pep;Name=PF03034;signature_desc=Phosphatidyl serine synthase;Ontology_term=GO:0006659 ### LTnewLM_14 AUGUSTUS gene 544921 545706 1 + . ID=LTnewLM_140019900 LTnewLM_14 AUGUSTUS mRNA 544921 545706 1 + . ID=LTnewLM_140019900.1;Parent=LTnewLM_140019900 LTnewLM_14 AUGUSTUS CDS 544921 545706 1 + 0 ID=LTnewLM_140019900.1:CDS:1;Parent=LTnewLM_140019900.1 ### LTnewLM_14 . polypeptide 544921 545706 . + . ID=LTnewLM_140019900.1:pep;Derives_from=LTnewLM_140019900.1;orthologous_to=LmjF.14.1210_mRNA;ortholog_cluster=OG0001160;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 545335 545673 . + . Parent=LTnewLM_140019900.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_14 AUGUSTUS gene 546685 549480 1 + . ID=LTnewLM_140020000 LTnewLM_14 AUGUSTUS mRNA 546685 549480 1 + . ID=LTnewLM_140020000.1;Parent=LTnewLM_140020000 LTnewLM_14 AUGUSTUS CDS 546685 549480 1 + 0 ID=LTnewLM_140020000.1:CDS:1;Parent=LTnewLM_140020000.1 ### LTnewLM_14 . polypeptide 546685 549480 . + . ID=LTnewLM_140020000.1:pep;Derives_from=LTnewLM_140020000.1;orthologous_to=LmjF.14.1220_mRNA;ortholog_cluster=OG0001161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 551617 553323 1 + . ID=LTnewLM_140020100 LTnewLM_14 AUGUSTUS mRNA 551617 553323 1 + . ID=LTnewLM_140020100.1;Parent=LTnewLM_140020100 LTnewLM_14 AUGUSTUS CDS 551617 553323 1 + 0 ID=LTnewLM_140020100.1:CDS:1;Parent=LTnewLM_140020100.1 ### LTnewLM_14 . polypeptide 551617 553323 . + . ID=LTnewLM_140020100.1:pep;Derives_from=LTnewLM_140020100.1;orthologous_to=LmjF.14.1230_mRNA;ortholog_cluster=OG0001162;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 554674 555582 1 + . ID=LTnewLM_140020200 LTnewLM_14 AUGUSTUS mRNA 554674 555582 1 + . ID=LTnewLM_140020200.1;Parent=LTnewLM_140020200 LTnewLM_14 AUGUSTUS CDS 554674 555582 1 + 0 ID=LTnewLM_140020200.1:CDS:1;Parent=LTnewLM_140020200.1 ### LTnewLM_14 . polypeptide 554674 555582 . + . ID=LTnewLM_140020200.1:pep;Derives_from=LTnewLM_140020200.1;orthologous_to=LmjF.14.1240_mRNA;ortholog_cluster=OG0001163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 556462 557079 1 + . ID=LTnewLM_140020300 LTnewLM_14 AUGUSTUS mRNA 556462 557079 1 + . ID=LTnewLM_140020300.1;Parent=LTnewLM_140020300 LTnewLM_14 AUGUSTUS CDS 556462 557079 1 + 0 ID=LTnewLM_140020300.1:CDS:1;Parent=LTnewLM_140020300.1 ### LTnewLM_14 . polypeptide 556462 557079 . + . ID=LTnewLM_140020300.1:pep;Derives_from=LTnewLM_140020300.1;orthologous_to=LmjF.14.1250_mRNA;ortholog_cluster=OG0001164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 558997 559605 1 + . ID=LTnewLM_140020400 LTnewLM_14 AUGUSTUS mRNA 558997 559605 1 + . ID=LTnewLM_140020400.1;Parent=LTnewLM_140020400 LTnewLM_14 AUGUSTUS CDS 558997 559605 1 + 0 ID=LTnewLM_140020400.1:CDS:1;Parent=LTnewLM_140020400.1 ### LTnewLM_14 . polypeptide 558997 559605 . + . ID=LTnewLM_140020400.1:pep;Derives_from=LTnewLM_140020400.1;orthologous_to=LmjF.14.1260_mRNA;ortholog_cluster=OG0001165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 560887 561345 1 + . ID=LTnewLM_140020500 LTnewLM_14 AUGUSTUS mRNA 560887 561345 1 + . ID=LTnewLM_140020500.1;Parent=LTnewLM_140020500 LTnewLM_14 AUGUSTUS CDS 560887 561345 1 + 0 ID=LTnewLM_140020500.1:CDS:1;Parent=LTnewLM_140020500.1 ### LTnewLM_14 . polypeptide 560887 561345 . + . ID=LTnewLM_140020500.1:pep;Derives_from=LTnewLM_140020500.1;orthologous_to=LTnewLM_360011800.1,LmjF.14.1270_mRNA;ortholog_cluster=OG0000335;product=term%3DUbiquitin family/Ribosomal protein S27a%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00240|Pfam:PF01599;Ontology_term=GO:0003735,GO:0005622,GO:0006412,GO:0005840,GO:0005515 LTnewLM_14 Pfam protein_match 560893 561078 . + . Parent=LTnewLM_140020500.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 561178 561321 . + . Parent=LTnewLM_140020500.1:pep;Name=PF01599;signature_desc=Ribosomal protein S27a;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_14 AUGUSTUS gene 562098 563834 1 + . ID=LTnewLM_140020600 LTnewLM_14 AUGUSTUS mRNA 562098 563834 1 + . ID=LTnewLM_140020600.1;Parent=LTnewLM_140020600 LTnewLM_14 AUGUSTUS CDS 562098 563834 1 + 0 ID=LTnewLM_140020600.1:CDS:1;Parent=LTnewLM_140020600.1 ### LTnewLM_14 . polypeptide 562098 563834 . + . ID=LTnewLM_140020600.1:pep;Derives_from=LTnewLM_140020600.1;orthologous_to=LmjF.14.1280_mRNA;ortholog_cluster=OG0001166;product=term%3DNADP oxidoreductase coenzyme F420-dependent%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03807 LTnewLM_14 Pfam protein_match 562491 562721 . + . Parent=LTnewLM_140020600.1:pep;Name=PF03807;signature_desc=NADP oxidoreductase coenzyme F420-dependent ### LTnewLM_14 AUGUSTUS gene 564759 567164 1 + . ID=LTnewLM_140020700 LTnewLM_14 AUGUSTUS mRNA 564759 567164 1 + . ID=LTnewLM_140020700.1;Parent=LTnewLM_140020700 LTnewLM_14 AUGUSTUS CDS 564759 567164 1 + 0 ID=LTnewLM_140020700.1:CDS:1;Parent=LTnewLM_140020700.1 ### LTnewLM_14 . polypeptide 564759 567164 . + . ID=LTnewLM_140020700.1:pep;Derives_from=LTnewLM_140020700.1;orthologous_to=LmjF.14.1290_mRNA;ortholog_cluster=OG0001167;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 568698 571985 1 + . ID=LTnewLM_140020800 LTnewLM_14 AUGUSTUS mRNA 568698 571985 1 + . ID=LTnewLM_140020800.1;Parent=LTnewLM_140020800 LTnewLM_14 AUGUSTUS CDS 568698 571985 1 + 0 ID=LTnewLM_140020800.1:CDS:1;Parent=LTnewLM_140020800.1 ### LTnewLM_14 . polypeptide 568698 571985 . + . ID=LTnewLM_140020800.1:pep;Derives_from=LTnewLM_140020800.1;orthologous_to=LmjF.14.1300_mRNA;ortholog_cluster=OG0001168;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_14 Pfam protein_match 570267 570929 . + . Parent=LTnewLM_140020800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_14 Pfam protein_match 570267 570941 . + . Parent=LTnewLM_140020800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_14 AUGUSTUS gene 574844 575935 1 + . ID=LTnewLM_140020900 LTnewLM_14 AUGUSTUS mRNA 574844 575935 1 + . ID=LTnewLM_140020900.1;Parent=LTnewLM_140020900 LTnewLM_14 AUGUSTUS CDS 574844 575935 1 + 0 ID=LTnewLM_140020900.1:CDS:1;Parent=LTnewLM_140020900.1 ### LTnewLM_14 . polypeptide 574844 575935 . + . ID=LTnewLM_140020900.1:pep;Derives_from=LTnewLM_140020900.1;orthologous_to=LTnewLM_140021000.1,LmjF.14.1310_mRNA;ortholog_cluster=OG0000336;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 578065 579156 1 + . ID=LTnewLM_140021000 LTnewLM_14 AUGUSTUS mRNA 578065 579156 1 + . ID=LTnewLM_140021000.1;Parent=LTnewLM_140021000 LTnewLM_14 AUGUSTUS CDS 578065 579156 1 + 0 ID=LTnewLM_140021000.1:CDS:1;Parent=LTnewLM_140021000.1 ### LTnewLM_14 . polypeptide 578065 579156 . + . ID=LTnewLM_140021000.1:pep;Derives_from=LTnewLM_140021000.1;orthologous_to=LTnewLM_140020900.1,LmjF.14.1310_mRNA;ortholog_cluster=OG0000336;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 580904 582301 1 + . ID=LTnewLM_140021100 LTnewLM_14 AUGUSTUS mRNA 580904 582301 1 + . ID=LTnewLM_140021100.1;Parent=LTnewLM_140021100 LTnewLM_14 AUGUSTUS CDS 580904 582301 1 + 0 ID=LTnewLM_140021100.1:CDS:1;Parent=LTnewLM_140021100.1 ### LTnewLM_14 . polypeptide 580904 582301 . + . ID=LTnewLM_140021100.1:pep;Derives_from=LTnewLM_140021100.1;orthologous_to=LmjF.14.1320_mRNA;ortholog_cluster=OG0001169;product=term%3DSerine hydroxymethyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00464;Ontology_term=GO:0006544,GO:0006563,GO:0004372 LTnewLM_14 Pfam protein_match 580925 582094 . + . Parent=LTnewLM_140021100.1:pep;Name=PF00464;signature_desc=Serine hydroxymethyltransferase;Ontology_term=GO:0004372,GO:0006544,GO:0006563 ### LTnewLM_14 AUGUSTUS gene 584904 586640 1 + . ID=LTnewLM_140021200 LTnewLM_14 AUGUSTUS mRNA 584904 586640 1 + . ID=LTnewLM_140021200.1;Parent=LTnewLM_140021200 LTnewLM_14 AUGUSTUS CDS 584904 586640 1 + 0 ID=LTnewLM_140021200.1:CDS:1;Parent=LTnewLM_140021200.1 ### LTnewLM_14 . polypeptide 584904 586640 . + . ID=LTnewLM_140021200.1:pep;Derives_from=LTnewLM_140021200.1;orthologous_to=LmjF.14.1330_mRNA;ortholog_cluster=OG0001170;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_14 Pfam protein_match 586200 586406 . + . Parent=LTnewLM_140021200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_14 Liftoff gene 588744 590030 . + . ID=LTnewLM_140021300;coverage=1.0;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.14.1340_0 LTnewLM_14 Liftoff mRNA 588744 590030 . + . ID=LTnewLM_140021300.1;Parent=LTnewLM_140021300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_14 Liftoff CDS 588744 590030 . + 0 ID=LTnewLM_140021300.1:CDS:1;Parent=LTnewLM_140021300.1;extra_copy_number=0 ### LTnewLM_14 . polypeptide 588744 590030 . + . ID=LTnewLM_140021300.1:pep;Derives_from=LTnewLM_140021300.1;orthologous_to=LmjF.14.1340_mRNA;ortholog_cluster=OG0001171;product=term%3DFatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487;Ontology_term=GO:0006629 LTnewLM_14 Pfam protein_match 589179 589943 . + . Parent=LTnewLM_140021300.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_14 AUGUSTUS gene 591445 593313 1 + . ID=LTnewLM_140021400 LTnewLM_14 AUGUSTUS mRNA 591445 593313 1 + . ID=LTnewLM_140021400.1;Parent=LTnewLM_140021400 LTnewLM_14 AUGUSTUS CDS 591445 593313 1 + 0 ID=LTnewLM_140021400.1:CDS:1;Parent=LTnewLM_140021400.1 ### LTnewLM_14 . polypeptide 591445 593313 . + . ID=LTnewLM_140021400.1:pep;Derives_from=LTnewLM_140021400.1;orthologous_to=LmjF.14.1350_mRNA;ortholog_cluster=OG0001172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 596030 597610 1 + . ID=LTnewLM_140021500 LTnewLM_14 AUGUSTUS mRNA 596030 597610 1 + . ID=LTnewLM_140021500.1;Parent=LTnewLM_140021500 LTnewLM_14 AUGUSTUS CDS 596030 597610 1 + 0 ID=LTnewLM_140021500.1:CDS:1;Parent=LTnewLM_140021500.1 ### LTnewLM_14 . polypeptide 596030 597610 . + . ID=LTnewLM_140021500.1:pep;Derives_from=LTnewLM_140021500.1;orthologous_to=LmjF.14.1360_mRNA;ortholog_cluster=OG0001173;product=term%3DMyo-inositol-1-phosphate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07994|Pfam:PF01658;Ontology_term=GO:0004512,GO:0006021,GO:0008654 LTnewLM_14 Pfam protein_match 596198 597520 . + . Parent=LTnewLM_140021500.1:pep;Name=PF07994;signature_desc=Myo-inositol-1-phosphate synthase;Ontology_term=GO:0004512,GO:0006021,GO:0008654 LTnewLM_14 Pfam protein_match 596948 597289 . + . Parent=LTnewLM_140021500.1:pep;Name=PF01658;signature_desc=Myo-inositol-1-phosphate synthase ### LTnewLM_14 Liftoff gene 598530 602627 . + . ID=LTnewLM_140021600;coverage=0.991;sequence_ID=0.933;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.14.1370_0 LTnewLM_14 Liftoff mRNA 598530 602627 . + . ID=LTnewLM_140021600.1;Parent=LTnewLM_140021600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 598530 600326 . + . ID=LTnewLM_140021600:five_prime_UTR;Parent=LTnewLM_140021600.1;extra_copy_number=0 LTnewLM_14 Liftoff CDS 600327 602627 . + 0 ID=LTnewLM_140021600.1:CDS:1;Parent=LTnewLM_140021600.1;extra_copy_number=0 LTnewLM_14 Liftoff mRNA 600385 602627 . + . ID=LTnewLM_140021600.2;Parent=LTnewLM_140021600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 600385 600389 . + . ID=LTnewLM_140021600:five_prime_UTR.1;Parent=LTnewLM_140021600.2;extra_copy_number=0 LTnewLM_14 Liftoff CDS 600390 602627 . + 0 ID=LTnewLM_140021600.2:CDS:1;Parent=LTnewLM_140021600.2;extra_copy_number=0 LTnewLM_14 Liftoff mRNA 600400 602627 . + . ID=LTnewLM_140021600.3;Parent=LTnewLM_140021600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_14 Liftoff five_prime_UTR 600400 600578 . + . ID=LTnewLM_140021600:five_prime_UTR.2;Parent=LTnewLM_140021600.3;extra_copy_number=0 LTnewLM_14 Liftoff CDS 600579 602627 . + 0 ID=LTnewLM_140021600.3:CDS:1;Parent=LTnewLM_140021600.3;extra_copy_number=0 ### LTnewLM_14 . polypeptide 600327 602627 . + . ID=LTnewLM_140021600.1:pep;Derives_from=LTnewLM_140021600.1;orthologous_to=LTnewLM_140021600.2,LTnewLM_140021600.3,LmjF.14.1370.1_mRNA,LmjF.14.1370.2_mRNA,LmjF.14.1370.3_mRNA;ortholog_cluster=OG0000055;product=term%3DtRNA synthetases class I (W and Y)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00579;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_14 Pfam protein_match 600672 601565 . + . Parent=LTnewLM_140021600.1:pep;Name=PF00579;signature_desc=tRNA synthetases class I (W and Y);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_14 . polypeptide 600390 602627 . + . ID=LTnewLM_140021600.2:pep;Derives_from=LTnewLM_140021600.2;orthologous_to=LTnewLM_140021600.1,LTnewLM_140021600.3,LmjF.14.1370.1_mRNA,LmjF.14.1370.2_mRNA,LmjF.14.1370.3_mRNA;ortholog_cluster=OG0000055;product=term%3DtRNA synthetases class I (W and Y)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00579;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_14 Pfam protein_match 600672 601565 . + . Parent=LTnewLM_140021600.2:pep;Name=PF00579;signature_desc=tRNA synthetases class I (W and Y);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_14 . polypeptide 600579 602627 . + . ID=LTnewLM_140021600.3:pep;Derives_from=LTnewLM_140021600.3;orthologous_to=LTnewLM_140021600.1,LTnewLM_140021600.2,LmjF.14.1370.1_mRNA,LmjF.14.1370.2_mRNA,LmjF.14.1370.3_mRNA;ortholog_cluster=OG0000055;product=term%3DtRNA synthetases class I (W and Y)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00579;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_14 Pfam protein_match 600672 601565 . + . Parent=LTnewLM_140021600.3:pep;Name=PF00579;signature_desc=tRNA synthetases class I (W and Y);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_14 AUGUSTUS gene 603521 604759 1 + . ID=LTnewLM_140021700 LTnewLM_14 AUGUSTUS mRNA 603521 604759 1 + . ID=LTnewLM_140021700.1;Parent=LTnewLM_140021700 LTnewLM_14 AUGUSTUS CDS 603521 604759 1 + 0 ID=LTnewLM_140021700.1:CDS:1;Parent=LTnewLM_140021700.1 ### LTnewLM_14 . polypeptide 603521 604759 . + . ID=LTnewLM_140021700.1:pep;Derives_from=LTnewLM_140021700.1;orthologous_to=LmjF.14.1380_mRNA;ortholog_cluster=OG0001174;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 605585 606250 1 + . ID=LTnewLM_140021800 LTnewLM_14 AUGUSTUS mRNA 605585 606250 1 + . ID=LTnewLM_140021800.1;Parent=LTnewLM_140021800 LTnewLM_14 AUGUSTUS CDS 605585 606250 1 + 0 ID=LTnewLM_140021800.1:CDS:1;Parent=LTnewLM_140021800.1 ### LTnewLM_14 . polypeptide 605585 606250 . + . ID=LTnewLM_140021800.1:pep;Derives_from=LTnewLM_140021800.1;orthologous_to=LmjF.14.1390_mRNA;ortholog_cluster=OG0001175;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_14 Pfam protein_match 605681 606199 . + . Parent=LTnewLM_140021800.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_14 AUGUSTUS gene 607065 607511 1 + . ID=LTnewLM_140021900 LTnewLM_14 AUGUSTUS mRNA 607065 607511 1 + . ID=LTnewLM_140021900.1;Parent=LTnewLM_140021900 LTnewLM_14 AUGUSTUS CDS 607065 607511 1 + 0 ID=LTnewLM_140021900.1:CDS:1;Parent=LTnewLM_140021900.1 ### LTnewLM_14 . polypeptide 607065 607511 . + . ID=LTnewLM_140021900.1:pep;Derives_from=LTnewLM_140021900.1;orthologous_to=LmjF.14.1395_mRNA;ortholog_cluster=OG0001176;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 611645 615719 0.78 + . ID=LTnewLM_140022000 LTnewLM_14 AUGUSTUS mRNA 611645 615719 0.78 + . ID=LTnewLM_140022000.1;Parent=LTnewLM_140022000 LTnewLM_14 AUGUSTUS CDS 611645 612510 0.78 + 0 ID=LTnewLM_140022000.1:CDS:1;Parent=LTnewLM_140022000.1 LTnewLM_14 AUGUSTUS CDS 612620 615719 0.88 + 1 ID=LTnewLM_140022000.1:CDS:2;Parent=LTnewLM_140022000.1 ### LTnewLM_14 . polypeptide 611645 615719 . + . ID=LTnewLM_140022000.1:pep;Derives_from=LTnewLM_140022000.1;orthologous_to=LmjF.14.1400_mRNA;ortholog_cluster=OG0001177;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 618864 620531 1 + . ID=LTnewLM_140022100 LTnewLM_14 AUGUSTUS mRNA 618864 620531 1 + . ID=LTnewLM_140022100.1;Parent=LTnewLM_140022100 LTnewLM_14 AUGUSTUS CDS 618864 620531 1 + 0 ID=LTnewLM_140022100.1:CDS:1;Parent=LTnewLM_140022100.1 ### LTnewLM_14 . polypeptide 618864 620531 . + . ID=LTnewLM_140022100.1:pep;Derives_from=LTnewLM_140022100.1;orthologous_to=LmjF.14.1410_mRNA;ortholog_cluster=OG0001178;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_14 Pfam protein_match 618873 619634 . + . Parent=LTnewLM_140022100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_14 Pfam protein_match 618882 619625 . + . Parent=LTnewLM_140022100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_14 AUGUSTUS gene 622239 624251 1 + . ID=LTnewLM_140022200 LTnewLM_14 AUGUSTUS mRNA 622239 624251 1 + . ID=LTnewLM_140022200.1;Parent=LTnewLM_140022200 LTnewLM_14 AUGUSTUS CDS 622239 624251 1 + 0 ID=LTnewLM_140022200.1:CDS:1;Parent=LTnewLM_140022200.1 ### LTnewLM_14 . polypeptide 622239 624251 . + . ID=LTnewLM_140022200.1:pep;Derives_from=LTnewLM_140022200.1;orthologous_to=LmjF.14.1420_mRNA;ortholog_cluster=OG0001179;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 625010 630271 1 + . ID=LTnewLM_140022300 LTnewLM_14 AUGUSTUS mRNA 625010 630271 1 + . ID=LTnewLM_140022300.1;Parent=LTnewLM_140022300 LTnewLM_14 AUGUSTUS CDS 625010 630271 1 + 0 ID=LTnewLM_140022300.1:CDS:1;Parent=LTnewLM_140022300.1 ### LTnewLM_14 . polypeptide 625010 630271 . + . ID=LTnewLM_140022300.1:pep;Derives_from=LTnewLM_140022300.1;orthologous_to=LmjF.14.1430_mRNA;ortholog_cluster=OG0001180;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 632120 635143 1 + . ID=LTnewLM_140022400 LTnewLM_14 AUGUSTUS mRNA 632120 635143 1 + . ID=LTnewLM_140022400.1;Parent=LTnewLM_140022400 LTnewLM_14 AUGUSTUS CDS 632120 635143 1 + 0 ID=LTnewLM_140022400.1:CDS:1;Parent=LTnewLM_140022400.1 ### LTnewLM_14 . polypeptide 632120 635143 . + . ID=LTnewLM_140022400.1:pep;Derives_from=LTnewLM_140022400.1;orthologous_to=LmjF.14.1440_mRNA;ortholog_cluster=OG0001181;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 632507 632779 . + . Parent=LTnewLM_140022400.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_14 Pfam protein_match 633431 633724 . + . Parent=LTnewLM_140022400.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_14 AUGUSTUS gene 637542 639599 1 + . ID=LTnewLM_140022500 LTnewLM_14 AUGUSTUS mRNA 637542 639599 1 + . ID=LTnewLM_140022500.1;Parent=LTnewLM_140022500 LTnewLM_14 AUGUSTUS CDS 637542 639599 1 + 0 ID=LTnewLM_140022500.1:CDS:1;Parent=LTnewLM_140022500.1 ### LTnewLM_14 . polypeptide 637542 639599 . + . ID=LTnewLM_140022500.1:pep;Derives_from=LTnewLM_140022500.1;orthologous_to=LmjF.14.1450_mRNA;ortholog_cluster=OG0001182;product=term%3DVacuolar 14 Fab1-binding region/Vacuolar protein 14 C-terminal Fig4p binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12755|Pfam:PF11916 LTnewLM_14 Pfam protein_match 637743 638030 . + . Parent=LTnewLM_140022500.1:pep;Name=PF12755;signature_desc=Vacuolar 14 Fab1-binding region LTnewLM_14 Pfam protein_match 638910 639458 . + . Parent=LTnewLM_140022500.1:pep;Name=PF11916;signature_desc=Vacuolar protein 14 C-terminal Fig4p binding ### LTnewLM_14 AUGUSTUS gene 640323 640745 1 + . ID=LTnewLM_140022600 LTnewLM_14 AUGUSTUS mRNA 640323 640745 1 + . ID=LTnewLM_140022600.1;Parent=LTnewLM_140022600 LTnewLM_14 AUGUSTUS CDS 640323 640745 1 + 0 ID=LTnewLM_140022600.1:CDS:1;Parent=LTnewLM_140022600.1 ### LTnewLM_14 . polypeptide 640323 640745 . + . ID=LTnewLM_140022600.1:pep;Derives_from=LTnewLM_140022600.1;orthologous_to=LmjF.14.1460_mRNA;ortholog_cluster=OG0001183;product=term%3DMitochondrial pyruvate carriers%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03650;Ontology_term=GO:0006850,GO:0005743 LTnewLM_14 Pfam protein_match 640455 640727 . + . Parent=LTnewLM_140022600.1:pep;Name=PF03650;signature_desc=Mitochondrial pyruvate carriers;Ontology_term=GO:0006850,GO:0005743 ### LTnewLM_14 AUGUSTUS gene 642164 643618 1 + . ID=LTnewLM_140022700 LTnewLM_14 AUGUSTUS mRNA 642164 643618 1 + . ID=LTnewLM_140022700.1;Parent=LTnewLM_140022700 LTnewLM_14 AUGUSTUS CDS 642164 643618 1 + 0 ID=LTnewLM_140022700.1:CDS:1;Parent=LTnewLM_140022700.1 ### LTnewLM_14 . polypeptide 642164 643618 . + . ID=LTnewLM_140022700.1:pep;Derives_from=LTnewLM_140022700.1;orthologous_to=LmjF.14.1470_mRNA;ortholog_cluster=OG0001184;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_14 AUGUSTUS gene 644349 645284 1 + . ID=LTnewLM_140022800 LTnewLM_14 AUGUSTUS mRNA 644349 645284 1 + . ID=LTnewLM_140022800.1;Parent=LTnewLM_140022800 LTnewLM_14 AUGUSTUS CDS 644349 645284 1 + 0 ID=LTnewLM_140022800.1:CDS:1;Parent=LTnewLM_140022800.1 ### LTnewLM_14 . polypeptide 644349 645284 . + . ID=LTnewLM_140022800.1:pep;Derives_from=LTnewLM_140022800.1;orthologous_to=LmjF.14.1480_mRNA;ortholog_cluster=OG0001185;product=term%3DGlutaredoxin/Glutathione S-transferase%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462|Pfam:PF13417;Ontology_term=GO:0005515,GO:0009055,GO:0045454,GO:0015035 LTnewLM_14 Pfam protein_match 644565 644708 . + . Parent=LTnewLM_140022800.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 LTnewLM_14 Pfam protein_match 644565 644777 . + . Parent=LTnewLM_140022800.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 ### LTnewLM_14 AUGUSTUS gene 646654 649191 1 + . ID=LTnewLM_140022900 LTnewLM_14 AUGUSTUS mRNA 646654 649191 1 + . ID=LTnewLM_140022900.1;Parent=LTnewLM_140022900 LTnewLM_14 AUGUSTUS CDS 646654 649191 1 + 0 ID=LTnewLM_140022900.1:CDS:1;Parent=LTnewLM_140022900.1 ### LTnewLM_14 . polypeptide 646654 649191 . + . ID=LTnewLM_140022900.1:pep;Derives_from=LTnewLM_140022900.1;orthologous_to=LmjF.14.1490_mRNA;ortholog_cluster=OG0001186;product=term%3DSacI homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02383;Ontology_term=GO:0042578 LTnewLM_14 Pfam protein_match 647029 647943 . + . Parent=LTnewLM_140022900.1:pep;Name=PF02383;signature_desc=SacI homology domain;Ontology_term=GO:0042578 ### LTnewLM_15 . contig 1 650084 . + . Name=LTnewLM_CTG000014 LTnewLM_15 AUGUSTUS gene 68 370 1 - . ID=LTnewLM_150005000 LTnewLM_15 AUGUSTUS mRNA 68 370 1 - . ID=LTnewLM_150005000.1;Parent=LTnewLM_150005000 LTnewLM_15 AUGUSTUS CDS 68 370 1 - 0 ID=LTnewLM_150005000.1:CDS:1;Parent=LTnewLM_150005000.1 ### LTnewLM_15 . polypeptide 68 370 . - . ID=LTnewLM_150005000.1:pep;Derives_from=LTnewLM_150005000.1;orthologous_to=LTnewLM_060005100.1,LmjF.06.0010_mRNA;ortholog_cluster=OG0000337;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_15 Pfam protein_match 104 289 . - . Parent=LTnewLM_150005000.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_15 Pfam protein_match 107 274 . - . Parent=LTnewLM_150005000.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_15 AUGUSTUS gene 879 2741 1 - . ID=LTnewLM_150005100 LTnewLM_15 AUGUSTUS mRNA 879 2741 1 - . ID=LTnewLM_150005100.1;Parent=LTnewLM_150005100 LTnewLM_15 AUGUSTUS CDS 879 2741 1 - 0 ID=LTnewLM_150005100.1:CDS:1;Parent=LTnewLM_150005100.1 ### LTnewLM_15 . polypeptide 879 2741 . - . ID=LTnewLM_150005100.1:pep;Derives_from=LTnewLM_150005100.1;orthologous_to=LmjF.15.0020_mRNA;ortholog_cluster=OG0001187;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 3579 4856 1 - . ID=LTnewLM_150005200 LTnewLM_15 AUGUSTUS mRNA 3579 4856 1 - . ID=LTnewLM_150005200.1;Parent=LTnewLM_150005200 LTnewLM_15 AUGUSTUS CDS 3579 4856 1 - 0 ID=LTnewLM_150005200.1:CDS:1;Parent=LTnewLM_150005200.1 ### LTnewLM_15 . polypeptide 3579 4856 . - . ID=LTnewLM_150005200.1:pep;Derives_from=LTnewLM_150005200.1;orthologous_to=LmjF.15.0030_mRNA;ortholog_cluster=OG0001188;product=term%3DGDA1/CD39 (nucleoside phosphatase) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01150;Ontology_term=GO:0016787 LTnewLM_15 Pfam protein_match 3597 4703 . - . Parent=LTnewLM_150005200.1:pep;Name=PF01150;signature_desc=GDA1/CD39 (nucleoside phosphatase) family;Ontology_term=GO:0016787 ### LTnewLM_15 AUGUSTUS gene 5704 6702 1 - . ID=LTnewLM_150005300 LTnewLM_15 AUGUSTUS mRNA 5704 6702 1 - . ID=LTnewLM_150005300.1;Parent=LTnewLM_150005300 LTnewLM_15 AUGUSTUS CDS 5704 6702 1 - 0 ID=LTnewLM_150005300.1:CDS:1;Parent=LTnewLM_150005300.1 ### LTnewLM_15 . polypeptide 5704 6702 . - . ID=LTnewLM_150005300.1:pep;Derives_from=LTnewLM_150005300.1;orthologous_to=LmjF.15.0040_mRNA;ortholog_cluster=OG0001189;product=term%3DSLOG cluster4 family/Possible lysine decarboxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18306|Pfam:PF03641 LTnewLM_15 Pfam protein_match 5755 6147 . - . Parent=LTnewLM_150005300.1:pep;Name=PF03641;signature_desc=Possible lysine decarboxylase LTnewLM_15 Pfam protein_match 5890 6183 . - . Parent=LTnewLM_150005300.1:pep;Name=PF18306;signature_desc=SLOG cluster4 family ### LTnewLM_15 AUGUSTUS gene 9135 10034 1 - . ID=LTnewLM_150005400 LTnewLM_15 AUGUSTUS mRNA 9135 10034 1 - . ID=LTnewLM_150005400.1;Parent=LTnewLM_150005400 LTnewLM_15 AUGUSTUS CDS 9135 10034 1 - 0 ID=LTnewLM_150005400.1:CDS:1;Parent=LTnewLM_150005400.1 ### LTnewLM_15 . polypeptide 9135 10034 . - . ID=LTnewLM_150005400.1:pep;Derives_from=LTnewLM_150005400.1;orthologous_to=LmjF.15.0050_mRNA;ortholog_cluster=OG0001190;product=term%3DOxidoreductase FAD-binding domain/Ferric reductase NAD binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF08030|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_15 Pfam protein_match 9240 9560 . - . Parent=LTnewLM_150005400.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_15 Pfam protein_match 9408 9569 . - . Parent=LTnewLM_150005400.1:pep;Name=PF08030;signature_desc=Ferric reductase NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_15 Pfam protein_match 9591 9884 . - . Parent=LTnewLM_150005400.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_15 AUGUSTUS gene 16696 19746 1 - . ID=LTnewLM_150005500 LTnewLM_15 AUGUSTUS mRNA 16696 19746 1 - . ID=LTnewLM_150005500.1;Parent=LTnewLM_150005500 LTnewLM_15 AUGUSTUS CDS 16696 19746 1 - 0 ID=LTnewLM_150005500.1:CDS:1;Parent=LTnewLM_150005500.1 ### LTnewLM_15 . polypeptide 16696 19746 . - . ID=LTnewLM_150005500.1:pep;Derives_from=LTnewLM_150005500.1;orthologous_to=LmjF.15.0060_mRNA;ortholog_cluster=OG0001191;product=term%3DMIF4G domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02854;Ontology_term=GO:0003723,GO:0005515 LTnewLM_15 Pfam protein_match 18457 19146 . - . Parent=LTnewLM_150005500.1:pep;Name=PF02854;signature_desc=MIF4G domain;Ontology_term=GO:0003723,GO:0005515 ### LTnewLM_15 AUGUSTUS gene 20967 22652 1 - . ID=LTnewLM_150005600 LTnewLM_15 AUGUSTUS mRNA 20967 22652 1 - . ID=LTnewLM_150005600.1;Parent=LTnewLM_150005600 LTnewLM_15 AUGUSTUS CDS 20967 22652 1 - 0 ID=LTnewLM_150005600.1:CDS:1;Parent=LTnewLM_150005600.1 ### LTnewLM_15 . polypeptide 20967 22652 . - . ID=LTnewLM_150005600.1:pep;Derives_from=LTnewLM_150005600.1;orthologous_to=LmjF.15.0070_mRNA;ortholog_cluster=OG0001192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 23544 24509 1 - . ID=LTnewLM_150005700 LTnewLM_15 AUGUSTUS mRNA 23544 24509 1 - . ID=LTnewLM_150005700.1;Parent=LTnewLM_150005700 LTnewLM_15 AUGUSTUS CDS 23544 24509 1 - 0 ID=LTnewLM_150005700.1:CDS:1;Parent=LTnewLM_150005700.1 ### LTnewLM_15 . polypeptide 23544 24509 . - . ID=LTnewLM_150005700.1:pep;Derives_from=LTnewLM_150005700.1;orthologous_to=LmjF.15.0080_mRNA;ortholog_cluster=OG0001193;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 26305 27750 1 - . ID=LTnewLM_150005800 LTnewLM_15 AUGUSTUS mRNA 26305 27750 1 - . ID=LTnewLM_150005800.1;Parent=LTnewLM_150005800 LTnewLM_15 AUGUSTUS CDS 26305 27750 1 - 0 ID=LTnewLM_150005800.1:CDS:1;Parent=LTnewLM_150005800.1 ### LTnewLM_15 . polypeptide 26305 27750 . - . ID=LTnewLM_150005800.1:pep;Derives_from=LTnewLM_150005800.1;orthologous_to=LmjF.15.0090_mRNA;ortholog_cluster=OG0001194;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA domain (Cdc48 subfamily)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004|Pfam:PF07724;Ontology_term=GO:0016887,GO:0005524 LTnewLM_15 Pfam protein_match 26653 26934 . - . Parent=LTnewLM_150005800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 26653 27015 . - . Parent=LTnewLM_150005800.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 27271 27429 . - . Parent=LTnewLM_150005800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 27325 27432 . - . Parent=LTnewLM_150005800.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_15 AUGUSTUS gene 29188 30882 1 - . ID=LTnewLM_150005900 LTnewLM_15 AUGUSTUS mRNA 29188 30882 1 - . ID=LTnewLM_150005900.1;Parent=LTnewLM_150005900 LTnewLM_15 AUGUSTUS CDS 29188 30882 1 - 0 ID=LTnewLM_150005900.1:CDS:1;Parent=LTnewLM_150005900.1 ### LTnewLM_15 . polypeptide 29188 30882 . - . ID=LTnewLM_150005900.1:pep;Derives_from=LTnewLM_150005900.1;orthologous_to=LmjF.15.0100_mRNA;ortholog_cluster=OG0001195;product=term%3DPyridine nucleotide-disulphide oxidoreductase/Flavin-binding monooxygenase-like/NAD(P)-binding Rossmann-like domain/L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF00743|Pfam:PF13450|Pfam:PF13434;Ontology_term=GO:0016491,GO:0004499,GO:0055114,GO:0050661,GO:0050660 LTnewLM_15 Pfam protein_match 30229 30873 . - . Parent=LTnewLM_150005900.1:pep;Name=PF00743;signature_desc=Flavin-binding monooxygenase-like;Ontology_term=GO:0004499,GO:0050660,GO:0050661,GO:0055114 LTnewLM_15 Pfam protein_match 30238 30876 . - . Parent=LTnewLM_150005900.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_15 Pfam protein_match 30244 30618 . - . Parent=LTnewLM_150005900.1:pep;Name=PF13434;signature_desc=L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase LTnewLM_15 Pfam protein_match 30751 30867 . - . Parent=LTnewLM_150005900.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_15 AUGUSTUS gene 32006 34399 1 - . ID=LTnewLM_150006000 LTnewLM_15 AUGUSTUS mRNA 32006 34399 1 - . ID=LTnewLM_150006000.1;Parent=LTnewLM_150006000 LTnewLM_15 AUGUSTUS CDS 32006 34399 1 - 0 ID=LTnewLM_150006000.1:CDS:1;Parent=LTnewLM_150006000.1 ### LTnewLM_15 . polypeptide 32006 34399 . - . ID=LTnewLM_150006000.1:pep;Derives_from=LTnewLM_150006000.1;orthologous_to=LmjF.15.0110_mRNA;ortholog_cluster=OG0001196;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 35481 36437 1 - . ID=LTnewLM_150006100 LTnewLM_15 AUGUSTUS mRNA 35481 36437 1 - . ID=LTnewLM_150006100.1;Parent=LTnewLM_150006100 LTnewLM_15 AUGUSTUS CDS 35481 36437 1 - 0 ID=LTnewLM_150006100.1:CDS:1;Parent=LTnewLM_150006100.1 ### LTnewLM_15 . polypeptide 35481 36437 . - . ID=LTnewLM_150006100.1:pep;Derives_from=LTnewLM_150006100.1;orthologous_to=LmjF.15.0120_mRNA;ortholog_cluster=OG0001197;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_15 Pfam protein_match 35586 35825 . - . Parent=LTnewLM_150006100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_15 Pfam protein_match 35877 36116 . - . Parent=LTnewLM_150006100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_15 Pfam protein_match 36147 36404 . - . Parent=LTnewLM_150006100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_15 AUGUSTUS gene 39883 42225 1 - . ID=LTnewLM_150006200 LTnewLM_15 AUGUSTUS mRNA 39883 42225 1 - . ID=LTnewLM_150006200.1;Parent=LTnewLM_150006200 LTnewLM_15 AUGUSTUS CDS 39883 42225 1 - 0 ID=LTnewLM_150006200.1:CDS:1;Parent=LTnewLM_150006200.1 ### LTnewLM_15 . polypeptide 39883 42225 . - . ID=LTnewLM_150006200.1:pep;Derives_from=LTnewLM_150006200.1;orthologous_to=LmjF.15.0130_mRNA;ortholog_cluster=OG0001198;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_15 Pfam protein_match 40588 40908 . - . Parent=LTnewLM_150006200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_15 Pfam protein_match 41221 41766 . - . Parent=LTnewLM_150006200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_15 AUGUSTUS gene 50286 50933 1 - . ID=LTnewLM_150006300 LTnewLM_15 AUGUSTUS mRNA 50286 50933 1 - . ID=LTnewLM_150006300.1;Parent=LTnewLM_150006300 LTnewLM_15 AUGUSTUS CDS 50286 50933 1 - 0 ID=LTnewLM_150006300.1:CDS:1;Parent=LTnewLM_150006300.1 ### LTnewLM_15 . polypeptide 50286 50933 . - . ID=LTnewLM_150006300.1:pep;Derives_from=LTnewLM_150006300.1;orthologous_to=LmjF.15.0140_mRNA;ortholog_cluster=OG0001199;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_15 Pfam protein_match 50814 50891 . - . Parent=LTnewLM_150006300.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_15 AUGUSTUS gene 53872 54420 1 - . ID=LTnewLM_150006400 LTnewLM_15 AUGUSTUS mRNA 53872 54420 1 - . ID=LTnewLM_150006400.1;Parent=LTnewLM_150006400 LTnewLM_15 AUGUSTUS CDS 53872 54420 1 - 0 ID=LTnewLM_150006400.1:CDS:1;Parent=LTnewLM_150006400.1 ### LTnewLM_15 . polypeptide 53872 54420 . - . ID=LTnewLM_150006400.1:pep;Derives_from=LTnewLM_150006400.1;orthologous_to=LmjF.15.0150_mRNA;ortholog_cluster=OG0001200;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 56439 58946 1 - . ID=LTnewLM_150006500 LTnewLM_15 AUGUSTUS mRNA 56439 58946 1 - . ID=LTnewLM_150006500.1;Parent=LTnewLM_150006500 LTnewLM_15 AUGUSTUS CDS 56439 58946 1 - 0 ID=LTnewLM_150006500.1:CDS:1;Parent=LTnewLM_150006500.1 ### LTnewLM_15 . polypeptide 56439 58946 . - . ID=LTnewLM_150006500.1:pep;Derives_from=LTnewLM_150006500.1;orthologous_to=LmjF.15.0160_mRNA;ortholog_cluster=OG0001201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 61688 62902 1 - . ID=LTnewLM_150006600 LTnewLM_15 AUGUSTUS mRNA 61688 62902 1 - . ID=LTnewLM_150006600.1;Parent=LTnewLM_150006600 LTnewLM_15 AUGUSTUS CDS 61688 62902 1 - 0 ID=LTnewLM_150006600.1:CDS:1;Parent=LTnewLM_150006600.1 ### LTnewLM_15 . polypeptide 61688 62902 . - . ID=LTnewLM_150006600.1:pep;Derives_from=LTnewLM_150006600.1;orthologous_to=LmjF.15.0170_mRNA;ortholog_cluster=OG0001202;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_15 Pfam protein_match 61760 62503 . - . Parent=LTnewLM_150006600.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_15 AUGUSTUS gene 64440 66668 1 - . ID=LTnewLM_150006700 LTnewLM_15 AUGUSTUS mRNA 64440 66668 1 - . ID=LTnewLM_150006700.1;Parent=LTnewLM_150006700 LTnewLM_15 AUGUSTUS CDS 64440 66668 1 - 0 ID=LTnewLM_150006700.1:CDS:1;Parent=LTnewLM_150006700.1 ### LTnewLM_15 . polypeptide 64440 66668 . - . ID=LTnewLM_150006700.1:pep;Derives_from=LTnewLM_150006700.1;orthologous_to=LmjF.15.0180_mRNA;ortholog_cluster=OG0001203;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_15 Pfam protein_match 64659 65588 . - . Parent=LTnewLM_150006700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_15 Pfam protein_match 64998 65585 . - . Parent=LTnewLM_150006700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_15 Liftoff gene 70214 71974 . - . ID=LTnewLM_150006800;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0185_0 LTnewLM_15 Liftoff mRNA 70214 71974 . - . ID=LTnewLM_150006800.1;Parent=LTnewLM_150006800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_15 Liftoff CDS 70214 71974 . - 0 ID=LTnewLM_150006800.1:CDS:1;Parent=LTnewLM_150006800.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 70214 71974 . - . ID=LTnewLM_150006800.1:pep;Derives_from=LTnewLM_150006800.1;orthologous_to=LmjF.15.0185_mRNA;ortholog_cluster=OG0001204;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 73126 73617 1 - . ID=LTnewLM_150006900 LTnewLM_15 AUGUSTUS mRNA 73126 73617 1 - . ID=LTnewLM_150006900.1;Parent=LTnewLM_150006900 LTnewLM_15 AUGUSTUS CDS 73126 73617 1 - 0 ID=LTnewLM_150006900.1:CDS:1;Parent=LTnewLM_150006900.1 ### LTnewLM_15 . polypeptide 73126 73617 . - . ID=LTnewLM_150006900.1:pep;Derives_from=LTnewLM_150006900.1;orthologous_to=LmjF.15.0190_mRNA;ortholog_cluster=OG0001205;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_15 Pfam protein_match 73180 73452 . - . Parent=LTnewLM_150006900.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_15 AUGUSTUS gene 75377 76255 1 - . ID=LTnewLM_150007000 LTnewLM_15 AUGUSTUS mRNA 75377 76255 1 - . ID=LTnewLM_150007000.1;Parent=LTnewLM_150007000 LTnewLM_15 AUGUSTUS CDS 75377 76255 1 - 0 ID=LTnewLM_150007000.1:CDS:1;Parent=LTnewLM_150007000.1 ### LTnewLM_15 . polypeptide 75377 76255 . - . ID=LTnewLM_150007000.1:pep;Derives_from=LTnewLM_150007000.1;orthologous_to=LmjF.15.0195_mRNA;ortholog_cluster=OG0001206;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 77093 77761 1 - . ID=LTnewLM_150007100 LTnewLM_15 AUGUSTUS mRNA 77093 77761 1 - . ID=LTnewLM_150007100.1;Parent=LTnewLM_150007100 LTnewLM_15 AUGUSTUS CDS 77093 77761 1 - 0 ID=LTnewLM_150007100.1:CDS:1;Parent=LTnewLM_150007100.1 ### LTnewLM_15 . polypeptide 77093 77761 . - . ID=LTnewLM_150007100.1:pep;Derives_from=LTnewLM_150007100.1;orthologous_to=LTnewLM_340015100.1,LmjF.34.0860_mRNA;ortholog_cluster=OG0000338;product=term%3DRibosomal protein L13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00572;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_15 Pfam protein_match 77384 77692 . - . Parent=LTnewLM_150007100.1:pep;Name=PF00572;signature_desc=Ribosomal protein L13;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 79034 79324 1 - . ID=LTnewLM_150007200 LTnewLM_15 AUGUSTUS mRNA 79034 79324 1 - . ID=LTnewLM_150007200.1;Parent=LTnewLM_150007200 LTnewLM_15 AUGUSTUS CDS 79034 79324 1 - 0 ID=LTnewLM_150007200.1:CDS:1;Parent=LTnewLM_150007200.1 ### LTnewLM_15 . polypeptide 79034 79324 . - . ID=LTnewLM_150007200.1:pep;Derives_from=LTnewLM_150007200.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 80528 82087 1 - . ID=LTnewLM_150007300 LTnewLM_15 AUGUSTUS mRNA 80528 82087 1 - . ID=LTnewLM_150007300.1;Parent=LTnewLM_150007300 LTnewLM_15 AUGUSTUS CDS 80528 82087 1 - 0 ID=LTnewLM_150007300.1:CDS:1;Parent=LTnewLM_150007300.1 ### LTnewLM_15 . polypeptide 80528 82087 . - . ID=LTnewLM_150007300.1:pep;Derives_from=LTnewLM_150007300.1;orthologous_to=LmjF.15.0210_mRNA;ortholog_cluster=OG0001207;product=term%3DCFA20 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05018 LTnewLM_15 Pfam protein_match 81581 82006 . - . Parent=LTnewLM_150007300.1:pep;Name=PF05018;signature_desc=CFA20 domain ### LTnewLM_15 AUGUSTUS gene 82684 83808 1 - . ID=LTnewLM_150007400 LTnewLM_15 AUGUSTUS mRNA 82684 83808 1 - . ID=LTnewLM_150007400.1;Parent=LTnewLM_150007400 LTnewLM_15 AUGUSTUS CDS 82684 83808 1 - 0 ID=LTnewLM_150007400.1:CDS:1;Parent=LTnewLM_150007400.1 ### LTnewLM_15 . polypeptide 82684 83808 . - . ID=LTnewLM_150007400.1:pep;Derives_from=LTnewLM_150007400.1;orthologous_to=LmjF.15.0220_mRNA;ortholog_cluster=OG0001208;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_15 Pfam protein_match 82912 83559 . - . Parent=LTnewLM_150007400.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_15 AUGUSTUS gene 84669 85316 1 - . ID=LTnewLM_150007500 LTnewLM_15 AUGUSTUS mRNA 84669 85316 1 - . ID=LTnewLM_150007500.1;Parent=LTnewLM_150007500 LTnewLM_15 AUGUSTUS CDS 84669 85316 1 - 0 ID=LTnewLM_150007500.1:CDS:1;Parent=LTnewLM_150007500.1 ### LTnewLM_15 . polypeptide 84669 85316 . - . ID=LTnewLM_150007500.1:pep;Derives_from=LTnewLM_150007500.1;orthologous_to=LmjF.15.0223_mRNA;ortholog_cluster=OG0001209;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 86370 87413 1 + . ID=LTnewLM_150007600 LTnewLM_15 AUGUSTUS mRNA 86370 87413 1 + . ID=LTnewLM_150007600.1;Parent=LTnewLM_150007600 LTnewLM_15 AUGUSTUS CDS 86370 87413 1 + 0 ID=LTnewLM_150007600.1:CDS:1;Parent=LTnewLM_150007600.1 ### LTnewLM_15 . polypeptide 86370 87413 . + . ID=LTnewLM_150007600.1:pep;Derives_from=LTnewLM_150007600.1;orthologous_to=LmjF.15.0225_mRNA;ortholog_cluster=OG0001210;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_15 Pfam protein_match 87105 87212 . + . Parent=LTnewLM_150007600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_15 AUGUSTUS gene 87995 89755 1 + . ID=LTnewLM_150007700 LTnewLM_15 AUGUSTUS mRNA 87995 89755 1 + . ID=LTnewLM_150007700.1;Parent=LTnewLM_150007700 LTnewLM_15 AUGUSTUS CDS 87995 89755 1 + 0 ID=LTnewLM_150007700.1:CDS:1;Parent=LTnewLM_150007700.1 ### LTnewLM_15 . polypeptide 87995 89755 . + . ID=LTnewLM_150007700.1:pep;Derives_from=LTnewLM_150007700.1;orthologous_to=LmjF.15.0230_mRNA;ortholog_cluster=OG0001211;product=term%3DOB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF00152;Ontology_term=GO:0004812,GO:0005524,GO:0000166,GO:0003676,GO:0006418 LTnewLM_15 Pfam protein_match 88331 88570 . + . Parent=LTnewLM_150007700.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 LTnewLM_15 Pfam protein_match 88625 89677 . + . Parent=LTnewLM_150007700.1:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_15 AUGUSTUS gene 90821 92038 1 + . ID=LTnewLM_150007800 LTnewLM_15 AUGUSTUS mRNA 90821 92038 1 + . ID=LTnewLM_150007800.1;Parent=LTnewLM_150007800 LTnewLM_15 AUGUSTUS CDS 90821 92038 1 + 0 ID=LTnewLM_150007800.1:CDS:1;Parent=LTnewLM_150007800.1 ### LTnewLM_15 . polypeptide 90821 92038 . + . ID=LTnewLM_150007800.1:pep;Derives_from=LTnewLM_150007800.1;orthologous_to=LmjF.15.0240_mRNA;ortholog_cluster=OG0001212;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 93046 98879 0.83 + . ID=LTnewLM_150007900 LTnewLM_15 AUGUSTUS mRNA 93046 98879 0.83 + . ID=LTnewLM_150007900.1;Parent=LTnewLM_150007900 LTnewLM_15 AUGUSTUS CDS 93046 98078 0.84 + 0 ID=LTnewLM_150007900.1:CDS:1;Parent=LTnewLM_150007900.1 LTnewLM_15 AUGUSTUS CDS 98135 98879 0.84 + 1 ID=LTnewLM_150007900.1:CDS:2;Parent=LTnewLM_150007900.1 ### LTnewLM_15 . polypeptide 93046 98879 . + . ID=LTnewLM_150007900.1:pep;Derives_from=LTnewLM_150007900.1;orthologous_to=LmjF.15.0250_mRNA;ortholog_cluster=OG0001213;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 100422 101855 1 + . ID=LTnewLM_150008000 LTnewLM_15 AUGUSTUS mRNA 100422 101855 1 + . ID=LTnewLM_150008000.1;Parent=LTnewLM_150008000 LTnewLM_15 AUGUSTUS CDS 100422 101855 1 + 0 ID=LTnewLM_150008000.1:CDS:1;Parent=LTnewLM_150008000.1 ### LTnewLM_15 . polypeptide 100422 101855 . + . ID=LTnewLM_150008000.1:pep;Derives_from=LTnewLM_150008000.1;orthologous_to=LmjF.15.0260_mRNA;ortholog_cluster=OG0001214;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 103609 104382 1 + . ID=LTnewLM_150008100 LTnewLM_15 AUGUSTUS mRNA 103609 104382 1 + . ID=LTnewLM_150008100.1;Parent=LTnewLM_150008100 LTnewLM_15 AUGUSTUS CDS 103609 104382 1 + 0 ID=LTnewLM_150008100.1:CDS:1;Parent=LTnewLM_150008100.1 ### LTnewLM_15 . polypeptide 103609 104382 . + . ID=LTnewLM_150008100.1:pep;Derives_from=LTnewLM_150008100.1;orthologous_to=LmjF.15.0270_mRNA;ortholog_cluster=OG0001215;product=term%3DOB-fold nucleic acid binding domain/Replication protein A C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF08784;Ontology_term=GO:0003676 LTnewLM_15 Pfam protein_match 103792 104022 . + . Parent=LTnewLM_150008100.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 LTnewLM_15 Pfam protein_match 104080 104364 . + . Parent=LTnewLM_150008100.1:pep;Name=PF08784;signature_desc=Replication protein A C terminal ### LTnewLM_15 AUGUSTUS gene 106159 106722 1 + . ID=LTnewLM_150008200 LTnewLM_15 AUGUSTUS mRNA 106159 106722 1 + . ID=LTnewLM_150008200.1;Parent=LTnewLM_150008200 LTnewLM_15 AUGUSTUS CDS 106159 106722 1 + 0 ID=LTnewLM_150008200.1:CDS:1;Parent=LTnewLM_150008200.1 ### LTnewLM_15 . polypeptide 106159 106722 . + . ID=LTnewLM_150008200.1:pep;Derives_from=LTnewLM_150008200.1;orthologous_to=LTnewLM_150008300.1,LmjF.15.0280_mRNA;ortholog_cluster=OG0000339;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 108320 108883 1 + . ID=LTnewLM_150008300 LTnewLM_15 AUGUSTUS mRNA 108320 108883 1 + . ID=LTnewLM_150008300.1;Parent=LTnewLM_150008300 LTnewLM_15 AUGUSTUS CDS 108320 108883 1 + 0 ID=LTnewLM_150008300.1:CDS:1;Parent=LTnewLM_150008300.1 ### LTnewLM_15 . polypeptide 108320 108883 . + . ID=LTnewLM_150008300.1:pep;Derives_from=LTnewLM_150008300.1;orthologous_to=LTnewLM_150008200.1,LmjF.15.0280_mRNA;ortholog_cluster=OG0000339;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 110766 113168 1 + . ID=LTnewLM_150008400 LTnewLM_15 AUGUSTUS mRNA 110766 113168 1 + . ID=LTnewLM_150008400.1;Parent=LTnewLM_150008400 LTnewLM_15 AUGUSTUS CDS 110766 113168 1 + 0 ID=LTnewLM_150008400.1:CDS:1;Parent=LTnewLM_150008400.1 ### LTnewLM_15 . polypeptide 110766 113168 . + . ID=LTnewLM_150008400.1:pep;Derives_from=LTnewLM_150008400.1;orthologous_to=LmjF.15.0290_mRNA;ortholog_cluster=OG0001216;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 113732 114172 1 + . ID=LTnewLM_150008500 LTnewLM_15 AUGUSTUS mRNA 113732 114172 1 + . ID=LTnewLM_150008500.1;Parent=LTnewLM_150008500 LTnewLM_15 AUGUSTUS CDS 113732 114172 1 + 0 ID=LTnewLM_150008500.1:CDS:1;Parent=LTnewLM_150008500.1 ### LTnewLM_15 . polypeptide 113732 114172 . + . ID=LTnewLM_150008500.1:pep;Derives_from=LTnewLM_150008500.1;orthologous_to=LmjF.15.0300_mRNA;ortholog_cluster=OG0001217;product=term%3DEcotin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03974 LTnewLM_15 Pfam protein_match 113753 114136 . + . Parent=LTnewLM_150008500.1:pep;Name=PF03974;signature_desc=Ecotin ### LTnewLM_15 AUGUSTUS gene 115983 117938 1 + . ID=LTnewLM_150008600 LTnewLM_15 AUGUSTUS mRNA 115983 117938 1 + . ID=LTnewLM_150008600.1;Parent=LTnewLM_150008600 LTnewLM_15 AUGUSTUS CDS 115983 117938 1 + 0 ID=LTnewLM_150008600.1:CDS:1;Parent=LTnewLM_150008600.1 ### LTnewLM_15 . polypeptide 115983 117938 . + . ID=LTnewLM_150008600.1:pep;Derives_from=LTnewLM_150008600.1;orthologous_to=LmjF.15.0310_mRNA;ortholog_cluster=OG0001218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 119329 121608 1 + . ID=LTnewLM_150008700 LTnewLM_15 AUGUSTUS mRNA 119329 121608 1 + . ID=LTnewLM_150008700.1;Parent=LTnewLM_150008700 LTnewLM_15 AUGUSTUS CDS 119329 121608 1 + 0 ID=LTnewLM_150008700.1:CDS:1;Parent=LTnewLM_150008700.1 ### LTnewLM_15 . polypeptide 119329 121608 . + . ID=LTnewLM_150008700.1:pep;Derives_from=LTnewLM_150008700.1;orthologous_to=LmjF.15.0320_mRNA;ortholog_cluster=OG0001219;product=term%3DBD-FAE/Carboxylesterase family/alpha/beta hydrolase fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20434|Pfam:PF00135|Pfam:PF07859;Ontology_term=GO:0016787,GO:0008152 LTnewLM_15 Pfam protein_match 120385 120678 . + . Parent=LTnewLM_150008700.1:pep;Name=PF20434;signature_desc=BD-FAE LTnewLM_15 Pfam protein_match 120388 120675 . + . Parent=LTnewLM_150008700.1:pep;Name=PF00135;signature_desc=Carboxylesterase family LTnewLM_15 Pfam protein_match 120415 120678 . + . Parent=LTnewLM_150008700.1:pep;Name=PF07859;signature_desc=alpha/beta hydrolase fold;Ontology_term=GO:0016787,GO:0008152 ### LTnewLM_15 AUGUSTUS gene 125428 128484 1 + . ID=LTnewLM_150008800 LTnewLM_15 AUGUSTUS mRNA 125428 128484 1 + . ID=LTnewLM_150008800.1;Parent=LTnewLM_150008800 LTnewLM_15 AUGUSTUS CDS 125428 128484 1 + 0 ID=LTnewLM_150008800.1:CDS:1;Parent=LTnewLM_150008800.1 ### LTnewLM_15 . polypeptide 125428 128484 . + . ID=LTnewLM_150008800.1:pep;Derives_from=LTnewLM_150008800.1;orthologous_to=LmjF.15.0330_mRNA;ortholog_cluster=OG0001220;product=term%3DCarboxylesterase family/BD-FAE/alpha/beta hydrolase fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00135|Pfam:PF20434|Pfam:PF07859;Ontology_term=GO:0016787,GO:0008152 LTnewLM_15 Pfam protein_match 126985 127275 . + . Parent=LTnewLM_150008800.1:pep;Name=PF00135;signature_desc=Carboxylesterase family LTnewLM_15 Pfam protein_match 126985 127656 . + . Parent=LTnewLM_150008800.1:pep;Name=PF20434;signature_desc=BD-FAE LTnewLM_15 Pfam protein_match 127018 127278 . + . Parent=LTnewLM_150008800.1:pep;Name=PF07859;signature_desc=alpha/beta hydrolase fold;Ontology_term=GO:0016787,GO:0008152 ### LTnewLM_15 AUGUSTUS gene 129532 131016 1 + . ID=LTnewLM_150008900 LTnewLM_15 AUGUSTUS mRNA 129532 131016 1 + . ID=LTnewLM_150008900.1;Parent=LTnewLM_150008900 LTnewLM_15 AUGUSTUS CDS 129532 131016 1 + 0 ID=LTnewLM_150008900.1:CDS:1;Parent=LTnewLM_150008900.1 ### LTnewLM_15 . polypeptide 129532 131016 . + . ID=LTnewLM_150008900.1:pep;Derives_from=LTnewLM_150008900.1;orthologous_to=LmjF.15.0340_mRNA;ortholog_cluster=OG0001221;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 131643 133607 1 + . ID=LTnewLM_150009000 LTnewLM_15 AUGUSTUS mRNA 131643 133607 1 + . ID=LTnewLM_150009000.1;Parent=LTnewLM_150009000 LTnewLM_15 AUGUSTUS CDS 131643 133607 1 + 0 ID=LTnewLM_150009000.1:CDS:1;Parent=LTnewLM_150009000.1 ### LTnewLM_15 . polypeptide 131643 133607 . + . ID=LTnewLM_150009000.1:pep;Derives_from=LTnewLM_150009000.1;orthologous_to=LmjF.15.0350_mRNA;ortholog_cluster=OG0001222;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 134053 137271 0.89 + . ID=LTnewLM_150009100 LTnewLM_15 AUGUSTUS mRNA 134053 137271 0.89 + . ID=LTnewLM_150009100.1;Parent=LTnewLM_150009100 LTnewLM_15 AUGUSTUS CDS 134053 134060 1 + 0 ID=LTnewLM_150009100.1:CDS:1;Parent=LTnewLM_150009100.1 LTnewLM_15 AUGUSTUS CDS 134268 137271 0.89 + 1 ID=LTnewLM_150009100.1:CDS:2;Parent=LTnewLM_150009100.1 ### LTnewLM_15 . polypeptide 134053 137271 . + . ID=LTnewLM_150009100.1:pep;Derives_from=LTnewLM_150009100.1;orthologous_to=LmjF.15.0360_mRNA;ortholog_cluster=OG0001223;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_15 Pfam protein_match 135700 135867 . + . Parent=LTnewLM_150009100.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 LTnewLM_15 Pfam protein_match 136507 136668 . + . Parent=LTnewLM_150009100.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_15 AUGUSTUS gene 138035 138361 1 + . ID=LTnewLM_150009200 LTnewLM_15 AUGUSTUS mRNA 138035 138361 1 + . ID=LTnewLM_150009200.1;Parent=LTnewLM_150009200 LTnewLM_15 AUGUSTUS CDS 138035 138361 1 + 0 ID=LTnewLM_150009200.1:CDS:1;Parent=LTnewLM_150009200.1 ### LTnewLM_15 . polypeptide 138035 138361 . + . ID=LTnewLM_150009200.1:pep;Derives_from=LTnewLM_150009200.1;orthologous_to=LTnewLM_150009300.1,LmjF.15.0370_mRNA,LmjF.15.0380_mRNA;ortholog_cluster=OG0000125;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_15 Pfam protein_match 138098 138352 . + . Parent=LTnewLM_150009200.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 139134 139460 1 + . ID=LTnewLM_150009300 LTnewLM_15 AUGUSTUS mRNA 139134 139460 1 + . ID=LTnewLM_150009300.1;Parent=LTnewLM_150009300 LTnewLM_15 AUGUSTUS CDS 139134 139460 1 + 0 ID=LTnewLM_150009300.1:CDS:1;Parent=LTnewLM_150009300.1 ### LTnewLM_15 . polypeptide 139134 139460 . + . ID=LTnewLM_150009300.1:pep;Derives_from=LTnewLM_150009300.1;orthologous_to=LTnewLM_150009200.1,LmjF.15.0370_mRNA,LmjF.15.0380_mRNA;ortholog_cluster=OG0000125;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_15 Pfam protein_match 139197 139451 . + . Parent=LTnewLM_150009300.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 140187 141383 1 + . ID=LTnewLM_150009400 LTnewLM_15 AUGUSTUS mRNA 140187 141383 1 + . ID=LTnewLM_150009400.1;Parent=LTnewLM_150009400 LTnewLM_15 AUGUSTUS CDS 140187 141383 1 + 0 ID=LTnewLM_150009400.1:CDS:1;Parent=LTnewLM_150009400.1 ### LTnewLM_15 . polypeptide 140187 141383 . + . ID=LTnewLM_150009400.1:pep;Derives_from=LTnewLM_150009400.1;orthologous_to=LmjF.15.0390_mRNA;ortholog_cluster=OG0001224;product=term%3DAsparaginase%2C N-terminal/Glutaminase/Asparaginase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00710|Pfam:PF17763;Ontology_term=GO:0006520 LTnewLM_15 Pfam protein_match 140271 140816 . + . Parent=LTnewLM_150009400.1:pep;Name=PF00710;signature_desc=Asparaginase%2C N-terminal;Ontology_term=GO:0006520 LTnewLM_15 Pfam protein_match 140922 141323 . + . Parent=LTnewLM_150009400.1:pep;Name=PF17763;signature_desc=Glutaminase/Asparaginase C-terminal domain ### LTnewLM_15 AUGUSTUS gene 142142 144184 1 + . ID=LTnewLM_150009500 LTnewLM_15 AUGUSTUS mRNA 142142 144184 1 + . ID=LTnewLM_150009500.1;Parent=LTnewLM_150009500 LTnewLM_15 AUGUSTUS CDS 142142 144184 1 + 0 ID=LTnewLM_150009500.1:CDS:1;Parent=LTnewLM_150009500.1 ### LTnewLM_15 . polypeptide 142142 144184 . + . ID=LTnewLM_150009500.1:pep;Derives_from=LTnewLM_150009500.1;orthologous_to=LmjF.15.0400_mRNA;ortholog_cluster=OG0001225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 144794 146878 1 + . ID=LTnewLM_150009600 LTnewLM_15 AUGUSTUS mRNA 144794 146878 1 + . ID=LTnewLM_150009600.1;Parent=LTnewLM_150009600 LTnewLM_15 AUGUSTUS CDS 144794 146878 1 + 0 ID=LTnewLM_150009600.1:CDS:1;Parent=LTnewLM_150009600.1 ### LTnewLM_15 . polypeptide 144794 146878 . + . ID=LTnewLM_150009600.1:pep;Derives_from=LTnewLM_150009600.1;orthologous_to=LmjF.15.0410_mRNA;ortholog_cluster=OG0001226;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 147472 147912 1 + . ID=LTnewLM_150009700 LTnewLM_15 AUGUSTUS mRNA 147472 147912 1 + . ID=LTnewLM_150009700.1;Parent=LTnewLM_150009700 LTnewLM_15 AUGUSTUS CDS 147472 147912 1 + 0 ID=LTnewLM_150009700.1:CDS:1;Parent=LTnewLM_150009700.1 ### LTnewLM_15 . polypeptide 147472 147912 . + . ID=LTnewLM_150009700.1:pep;Derives_from=LTnewLM_150009700.1;orthologous_to=LmjF.15.0420_mRNA;ortholog_cluster=OG0001227;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 149448 150485 1 + . ID=LTnewLM_150009800 LTnewLM_15 AUGUSTUS mRNA 149448 150485 1 + . ID=LTnewLM_150009800.1;Parent=LTnewLM_150009800 LTnewLM_15 AUGUSTUS CDS 149448 150485 1 + 0 ID=LTnewLM_150009800.1:CDS:1;Parent=LTnewLM_150009800.1 ### LTnewLM_15 . polypeptide 149448 150485 . + . ID=LTnewLM_150009800.1:pep;Derives_from=LTnewLM_150009800.1;orthologous_to=LmjF.15.0430_mRNA;ortholog_cluster=OG0001228;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 153941 155608 . + . ID=LTnewLM_150009900.1:pep;Derives_from=LTnewLM_150009900.1;orthologous_to=LTnewLM_150009900.2,LTnewLM_150010000.1,LTnewLM_150010100.1,LTnewLM_150010200.1,LTnewLM_150010200.2;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 153941 156270 1.28 + . ID=LTnewLM_150009900 LTnewLM_15 AUGUSTUS mRNA 153941 155608 1 + . ID=LTnewLM_150009900.1;Parent=LTnewLM_150009900 LTnewLM_15 AUGUSTUS CDS 153941 155608 1 + 0 ID=LTnewLM_150009900.1:CDS:1;Parent=LTnewLM_150009900.1 LTnewLM_15 AUGUSTUS mRNA 153941 156270 0.28 + . ID=LTnewLM_150009900.2;Parent=LTnewLM_150009900 LTnewLM_15 AUGUSTUS CDS 153941 155555 0.47 + 0 ID=LTnewLM_150009900.2:CDS:1;Parent=LTnewLM_150009900.2 LTnewLM_15 AUGUSTUS CDS 155615 156270 0.28 + 2 ID=LTnewLM_150009900.2:CDS:2;Parent=LTnewLM_150009900.2 ### LTnewLM_15 . polypeptide 153941 156270 . + . ID=LTnewLM_150009900.2:pep;Derives_from=LTnewLM_150009900.2;orthologous_to=LTnewLM_150009900.1,LTnewLM_150010000.1,LTnewLM_150010100.1,LTnewLM_150010200.1,LTnewLM_150010200.2;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 156595 159461 0.57 + . ID=LTnewLM_150010000 LTnewLM_15 AUGUSTUS mRNA 156595 159461 0.57 + . ID=LTnewLM_150010000.1;Parent=LTnewLM_150010000 LTnewLM_15 AUGUSTUS CDS 156595 158334 0.57 + 0 ID=LTnewLM_150010000.1:CDS:1;Parent=LTnewLM_150010000.1 LTnewLM_15 AUGUSTUS CDS 158382 159461 0.57 + 0 ID=LTnewLM_150010000.1:CDS:2;Parent=LTnewLM_150010000.1 ### LTnewLM_15 . polypeptide 156595 159461 . + . ID=LTnewLM_150010000.1:pep;Derives_from=LTnewLM_150010000.1;orthologous_to=LTnewLM_150009900.1,LTnewLM_150009900.2,LTnewLM_150010100.1,LTnewLM_150010200.1,LTnewLM_150010200.2;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 159502 165383 0.41 + . ID=LTnewLM_150010100 LTnewLM_15 AUGUSTUS mRNA 159502 165383 0.41 + . ID=LTnewLM_150010100.1;Parent=LTnewLM_150010100 LTnewLM_15 AUGUSTUS CDS 159502 160127 0.41 + 0 ID=LTnewLM_150010100.1:CDS:1;Parent=LTnewLM_150010100.1 LTnewLM_15 AUGUSTUS CDS 160175 165383 0.41 + 1 ID=LTnewLM_150010100.1:CDS:2;Parent=LTnewLM_150010100.1 ### LTnewLM_15 . polypeptide 159502 165383 . + . ID=LTnewLM_150010100.1:pep;Derives_from=LTnewLM_150010100.1;orthologous_to=LTnewLM_150009900.1,LTnewLM_150009900.2,LTnewLM_150010000.1,LTnewLM_150010200.1,LTnewLM_150010200.2;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 165435 167599 . + . ID=LTnewLM_150010200.1:pep;Derives_from=LTnewLM_150010200.1;orthologous_to=LTnewLM_150009900.1,LTnewLM_150009900.2,LTnewLM_150010000.1,LTnewLM_150010100.1,LTnewLM_150010200.2;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 165435 170007 1.33 + . ID=LTnewLM_150010200 LTnewLM_15 AUGUSTUS mRNA 165435 167599 0.97 + . ID=LTnewLM_150010200.1;Parent=LTnewLM_150010200 LTnewLM_15 AUGUSTUS CDS 165435 167530 0.97 + 0 ID=LTnewLM_150010200.1:CDS:1;Parent=LTnewLM_150010200.1 LTnewLM_15 AUGUSTUS CDS 167590 167599 0.97 + 1 ID=LTnewLM_150010200.1:CDS:2;Parent=LTnewLM_150010200.1 LTnewLM_15 AUGUSTUS mRNA 165435 170007 0.36 + . ID=LTnewLM_150010200.2;Parent=LTnewLM_150010200 LTnewLM_15 AUGUSTUS CDS 165435 169422 0.59 + 0 ID=LTnewLM_150010200.2:CDS:1;Parent=LTnewLM_150010200.2 LTnewLM_15 AUGUSTUS CDS 169601 170007 0.65 + 2 ID=LTnewLM_150010200.2:CDS:2;Parent=LTnewLM_150010200.2 ### LTnewLM_15 . polypeptide 165435 170007 . + . ID=LTnewLM_150010200.2:pep;Derives_from=LTnewLM_150010200.2;orthologous_to=LTnewLM_150009900.1,LTnewLM_150009900.2,LTnewLM_150010000.1,LTnewLM_150010100.1,LTnewLM_150010200.1;ortholog_cluster=OG0000056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 170247 180856 1.95 + . ID=LTnewLM_150010300 LTnewLM_15 AUGUSTUS mRNA 170247 180856 0.97 + . ID=LTnewLM_150010300.1;Parent=LTnewLM_150010300 LTnewLM_15 AUGUSTUS CDS 170247 177781 0.97 + 0 ID=LTnewLM_150010300.1:CDS:1;Parent=LTnewLM_150010300.1 LTnewLM_15 AUGUSTUS CDS 177847 180856 0.97 + 1 ID=LTnewLM_150010300.1:CDS:2;Parent=LTnewLM_150010300.1 LTnewLM_15 AUGUSTUS mRNA 177926 180856 0.98 + . ID=LTnewLM_150010300.2;Parent=LTnewLM_150010300 LTnewLM_15 AUGUSTUS CDS 177926 180856 0.98 + 0 ID=LTnewLM_150010300.2:CDS:1;Parent=LTnewLM_150010300.2 ### LTnewLM_15 . polypeptide 170247 180856 . + . ID=LTnewLM_150010300.1:pep;Derives_from=LTnewLM_150010300.1;orthologous_to=LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 177926 180856 . + . ID=LTnewLM_150010300.2:pep;Derives_from=LTnewLM_150010300.2;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 183296 188618 0.9 + . ID=LTnewLM_150010400 LTnewLM_15 AUGUSTUS mRNA 183296 188618 0.9 + . ID=LTnewLM_150010400.1;Parent=LTnewLM_150010400 LTnewLM_15 AUGUSTUS CDS 183296 186255 0.99 + 0 ID=LTnewLM_150010400.1:CDS:1;Parent=LTnewLM_150010400.1 LTnewLM_15 AUGUSTUS CDS 186311 188618 0.9 + 1 ID=LTnewLM_150010400.1:CDS:2;Parent=LTnewLM_150010400.1 ### LTnewLM_15 . polypeptide 183296 188618 . + . ID=LTnewLM_150010400.1:pep;Derives_from=LTnewLM_150010400.1;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 189208 190541 1.13 + . ID=LTnewLM_150010500 LTnewLM_15 AUGUSTUS mRNA 189208 190541 0.54 + . ID=LTnewLM_150010500.1;Parent=LTnewLM_150010500 LTnewLM_15 AUGUSTUS CDS 189208 189963 0.98 + 0 ID=LTnewLM_150010500.1:CDS:1;Parent=LTnewLM_150010500.1 LTnewLM_15 AUGUSTUS CDS 190011 190541 0.54 + 0 ID=LTnewLM_150010500.1:CDS:2;Parent=LTnewLM_150010500.1 LTnewLM_15 AUGUSTUS mRNA 189499 190541 0.59 + . ID=LTnewLM_150010500.2;Parent=LTnewLM_150010500 LTnewLM_15 AUGUSTUS CDS 189499 189963 0.91 + 0 ID=LTnewLM_150010500.2:CDS:1;Parent=LTnewLM_150010500.2 LTnewLM_15 AUGUSTUS CDS 190011 190541 0.66 + 0 ID=LTnewLM_150010500.2:CDS:2;Parent=LTnewLM_150010500.2 ### LTnewLM_15 . polypeptide 189208 190541 . + . ID=LTnewLM_150010500.1:pep;Derives_from=LTnewLM_150010500.1;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 189499 190541 . + . ID=LTnewLM_150010500.2:pep;Derives_from=LTnewLM_150010500.2;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 190712 191368 1 + . ID=LTnewLM_150010600 LTnewLM_15 AUGUSTUS mRNA 190712 191368 1 + . ID=LTnewLM_150010600.1;Parent=LTnewLM_150010600 LTnewLM_15 AUGUSTUS CDS 190712 191368 1 + 0 ID=LTnewLM_150010600.1:CDS:1;Parent=LTnewLM_150010600.1 ### LTnewLM_15 . polypeptide 190712 191368 . + . ID=LTnewLM_150010600.1:pep;Derives_from=LTnewLM_150010600.1;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 191419 195670 0.71 + . ID=LTnewLM_150010700 LTnewLM_15 AUGUSTUS mRNA 191419 195670 0.71 + . ID=LTnewLM_150010700.1;Parent=LTnewLM_150010700 LTnewLM_15 AUGUSTUS CDS 191419 195610 0.93 + 0 ID=LTnewLM_150010700.1:CDS:1;Parent=LTnewLM_150010700.1 LTnewLM_15 AUGUSTUS CDS 195657 195670 0.71 + 2 ID=LTnewLM_150010700.1:CDS:2;Parent=LTnewLM_150010700.1 ### LTnewLM_15 . polypeptide 191419 195670 . + . ID=LTnewLM_150010700.1:pep;Derives_from=LTnewLM_150010700.1;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 195726 196708 . + . ID=LTnewLM_150010800.1:pep;Derives_from=LTnewLM_150010800.1;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 195726 198682 . + . ID=LTnewLM_150010800.2:pep;Derives_from=LTnewLM_150010800.2;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.3,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 195726 199395 . + . ID=LTnewLM_150010800.3:pep;Derives_from=LTnewLM_150010800.3;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.4,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 195726 203566 . + . ID=LTnewLM_150010800.4:pep;Derives_from=LTnewLM_150010800.4;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.5;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 195726 212444 3.17 + . ID=LTnewLM_150010800 LTnewLM_15 AUGUSTUS mRNA 195726 196708 0.98 + . ID=LTnewLM_150010800.1;Parent=LTnewLM_150010800 LTnewLM_15 AUGUSTUS CDS 195726 196531 1 + 0 ID=LTnewLM_150010800.1:CDS:1;Parent=LTnewLM_150010800.1 LTnewLM_15 AUGUSTUS CDS 196597 196708 0.98 + 1 ID=LTnewLM_150010800.1:CDS:2;Parent=LTnewLM_150010800.1 LTnewLM_15 AUGUSTUS mRNA 195726 198682 0.97 + . ID=LTnewLM_150010800.2;Parent=LTnewLM_150010800 LTnewLM_15 AUGUSTUS CDS 195726 198505 1 + 0 ID=LTnewLM_150010800.2:CDS:1;Parent=LTnewLM_150010800.2 LTnewLM_15 AUGUSTUS CDS 198571 198682 0.97 + 1 ID=LTnewLM_150010800.2:CDS:2;Parent=LTnewLM_150010800.2 LTnewLM_15 AUGUSTUS mRNA 195726 199395 0.68 + . ID=LTnewLM_150010800.3;Parent=LTnewLM_150010800 LTnewLM_15 AUGUSTUS CDS 195726 199300 0.87 + 0 ID=LTnewLM_150010800.3:CDS:1;Parent=LTnewLM_150010800.3 LTnewLM_15 AUGUSTUS CDS 199374 199395 0.68 + 1 ID=LTnewLM_150010800.3:CDS:2;Parent=LTnewLM_150010800.3 LTnewLM_15 AUGUSTUS mRNA 195726 203566 0.37 + . ID=LTnewLM_150010800.4;Parent=LTnewLM_150010800 LTnewLM_15 AUGUSTUS CDS 195726 203508 0.5 + 0 ID=LTnewLM_150010800.4:CDS:1;Parent=LTnewLM_150010800.4 LTnewLM_15 AUGUSTUS CDS 203553 203566 0.37 + 2 ID=LTnewLM_150010800.4:CDS:2;Parent=LTnewLM_150010800.4 LTnewLM_15 AUGUSTUS mRNA 195726 212444 0.17 + . ID=LTnewLM_150010800.5;Parent=LTnewLM_150010800 LTnewLM_15 AUGUSTUS CDS 195726 207641 0.26 + 0 ID=LTnewLM_150010800.5:CDS:1;Parent=LTnewLM_150010800.5 LTnewLM_15 AUGUSTUS CDS 207720 212444 0.35 + 0 ID=LTnewLM_150010800.5:CDS:2;Parent=LTnewLM_150010800.5 ### LTnewLM_15 . polypeptide 195726 212444 . + . ID=LTnewLM_150010800.5:pep;Derives_from=LTnewLM_150010800.5;orthologous_to=LTnewLM_150010300.1,LTnewLM_150010300.2,LTnewLM_150010400.1,LTnewLM_150010500.1,LTnewLM_150010500.2,LTnewLM_150010600.1,LTnewLM_150010700.1,LTnewLM_150010800.1,LTnewLM_150010800.2,LTnewLM_150010800.3,LTnewLM_150010800.4;ortholog_cluster=OG0000013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 213131 215254 1 + . ID=LTnewLM_150010900 LTnewLM_15 AUGUSTUS mRNA 213131 215254 1 + . ID=LTnewLM_150010900.1;Parent=LTnewLM_150010900 LTnewLM_15 AUGUSTUS CDS 213131 215254 1 + 0 ID=LTnewLM_150010900.1:CDS:1;Parent=LTnewLM_150010900.1 ### LTnewLM_15 . polypeptide 213131 215254 . + . ID=LTnewLM_150010900.1:pep;Derives_from=LTnewLM_150010900.1;orthologous_to=LmjF.15.0490_mRNA;ortholog_cluster=OG0001229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 216164 219172 1 + . ID=LTnewLM_150011000 LTnewLM_15 AUGUSTUS mRNA 216164 219172 1 + . ID=LTnewLM_150011000.1;Parent=LTnewLM_150011000 LTnewLM_15 AUGUSTUS CDS 216164 219172 1 + 0 ID=LTnewLM_150011000.1:CDS:1;Parent=LTnewLM_150011000.1 ### LTnewLM_15 . polypeptide 216164 219172 . + . ID=LTnewLM_150011000.1:pep;Derives_from=LTnewLM_150011000.1;orthologous_to=LmjF.15.0500_mRNA;ortholog_cluster=OG0001230;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Vps4 C terminal oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004|Pfam:PF17862|Pfam:PF09336;Ontology_term=GO:0016887,GO:0005524 LTnewLM_15 Pfam protein_match 218306 218671 . + . Parent=LTnewLM_150011000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_15 Pfam protein_match 218306 218695 . + . Parent=LTnewLM_150011000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 218852 218989 . + . Parent=LTnewLM_150011000.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_15 Pfam protein_match 218945 219094 . + . Parent=LTnewLM_150011000.1:pep;Name=PF09336;signature_desc=Vps4 C terminal oligomerisation domain ### LTnewLM_15 AUGUSTUS gene 220118 220594 1 + . ID=LTnewLM_150011100 LTnewLM_15 AUGUSTUS mRNA 220118 220594 1 + . ID=LTnewLM_150011100.1;Parent=LTnewLM_150011100 LTnewLM_15 AUGUSTUS CDS 220118 220594 1 + 0 ID=LTnewLM_150011100.1:CDS:1;Parent=LTnewLM_150011100.1 ### LTnewLM_15 . polypeptide 220118 220594 . + . ID=LTnewLM_150011100.1:pep;Derives_from=LTnewLM_150011100.1;orthologous_to=LmjF.15.0510_mRNA;ortholog_cluster=OG0001231;product=term%3DEcotin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03974 LTnewLM_15 Pfam protein_match 220166 220537 . + . Parent=LTnewLM_150011100.1:pep;Name=PF03974;signature_desc=Ecotin ### LTnewLM_15 . pseudogene 221772 222916 . + . ID=LTnewLM_150011200:pseudogene;coverage=0.999;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0520_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 221772 222916 . + . ID=LTnewLM_150011200.1;Parent=LTnewLM_150011200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 221772 222916 . + . ID=LTnewLM_150011200.1:pseudogenic_exon:1;Parent=LTnewLM_150011200.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 221772 222916 . + . ID=LTnewLM_150011200.1:pep;Derives_from=LTnewLM_150011200.1;orthologous_to=LmjF.15.0520_mRNA;ortholog_cluster=OG0007456;product=term%3DEcotin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03974 LTnewLM_15 Pfam protein_match 221796 222158 . + . Parent=LTnewLM_150011200.1:pep;Name=PF03974;signature_desc=Ecotin ### LTnewLM_15 . pseudogene 226209 231810 . + . ID=LTnewLM_150011300:pseudogene;coverage=0.987;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0530_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 226209 231810 . + . ID=LTnewLM_150011300.1;Parent=LTnewLM_150011300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 226209 231810 . + . ID=LTnewLM_150011300.1:pseudogenic_exon:1;Parent=LTnewLM_150011300.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 226209 231810 . + . ID=LTnewLM_150011300.1:pep;Derives_from=LTnewLM_150011300.1;orthologous_to=LmjF.15.0530_mRNA;ortholog_cluster=OG0007457;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 233175 235199 1 + . ID=LTnewLM_150011400 LTnewLM_15 AUGUSTUS mRNA 233175 235199 1 + . ID=LTnewLM_150011400.1;Parent=LTnewLM_150011400 LTnewLM_15 AUGUSTUS CDS 233175 235199 1 + 0 ID=LTnewLM_150011400.1:CDS:1;Parent=LTnewLM_150011400.1 ### LTnewLM_15 . polypeptide 233175 235199 . + . ID=LTnewLM_150011400.1:pep;Derives_from=LTnewLM_150011400.1;orthologous_to=LmjF.15.0540_mRNA;ortholog_cluster=OG0001232;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 236690 242018 . + . ID=LTnewLM_150011500:pseudogene;coverage=0.994;sequence_ID=0.913;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0550_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 236690 242018 . + . ID=LTnewLM_150011500.1;Parent=LTnewLM_150011500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 236690 242018 . + . ID=LTnewLM_150011500.1:pseudogenic_exon:1;Parent=LTnewLM_150011500.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 236690 242018 . + . ID=LTnewLM_150011500.1:pep;Derives_from=LTnewLM_150011500.1;orthologous_to=LmjF.15.0550_mRNA;ortholog_cluster=OG0007458;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 242856 244661 1 + . ID=LTnewLM_150011600 LTnewLM_15 AUGUSTUS mRNA 242856 244661 1 + . ID=LTnewLM_150011600.1;Parent=LTnewLM_150011600 LTnewLM_15 AUGUSTUS CDS 242856 244661 1 + 0 ID=LTnewLM_150011600.1:CDS:1;Parent=LTnewLM_150011600.1 ### LTnewLM_15 . polypeptide 242856 244661 . + . ID=LTnewLM_150011600.1:pep;Derives_from=LTnewLM_150011600.1;orthologous_to=LmjF.15.0560_mRNA;ortholog_cluster=OG0001233;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 246615 247613 1 + . ID=LTnewLM_150011700 LTnewLM_15 AUGUSTUS mRNA 246615 247613 1 + . ID=LTnewLM_150011700.1;Parent=LTnewLM_150011700 LTnewLM_15 AUGUSTUS CDS 246615 247613 1 + 0 ID=LTnewLM_150011700.1:CDS:1;Parent=LTnewLM_150011700.1 ### LTnewLM_15 . polypeptide 246615 247613 . + . ID=LTnewLM_150011700.1:pep;Derives_from=LTnewLM_150011700.1;orthologous_to=LmjF.15.0570_mRNA;ortholog_cluster=OG0001234;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 249536 250514 . + . ID=LTnewLM_150011800:pseudogene;coverage=1.0;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0580_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 249536 250514 . + . ID=LTnewLM_150011800.1;Parent=LTnewLM_150011800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 249536 250514 . + . ID=LTnewLM_150011800.1:pseudogenic_exon:1;Parent=LTnewLM_150011800.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 249536 250514 . + . ID=LTnewLM_150011800.1:pep;Derives_from=LTnewLM_150011800.1;orthologous_to=LmjF.15.0580_mRNA;ortholog_cluster=OG0007459;product=term%3DSignal peptidase subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04573;Ontology_term=GO:0005787,GO:0006465,GO:0008233,GO:0016021 LTnewLM_15 Pfam protein_match 249920 250075 . + . Parent=LTnewLM_150011800.1:pep;Name=PF04573;signature_desc=Signal peptidase subunit;Ontology_term=GO:0008233,GO:0006465,GO:0005787,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 251199 251897 1 + . ID=LTnewLM_150011900 LTnewLM_15 AUGUSTUS mRNA 251199 251897 1 + . ID=LTnewLM_150011900.1;Parent=LTnewLM_150011900 LTnewLM_15 AUGUSTUS CDS 251199 251897 1 + 0 ID=LTnewLM_150011900.1:CDS:1;Parent=LTnewLM_150011900.1 ### LTnewLM_15 . polypeptide 251199 251897 . + . ID=LTnewLM_150011900.1:pep;Derives_from=LTnewLM_150011900.1;orthologous_to=LmjF.15.0590_mRNA;ortholog_cluster=OG0001235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 259826 263515 1 + . ID=LTnewLM_150012000 LTnewLM_15 AUGUSTUS mRNA 259826 263515 1 + . ID=LTnewLM_150012000.1;Parent=LTnewLM_150012000 LTnewLM_15 AUGUSTUS CDS 259826 263515 1 + 0 ID=LTnewLM_150012000.1:CDS:1;Parent=LTnewLM_150012000.1 ### LTnewLM_15 . polypeptide 259826 263515 . + . ID=LTnewLM_150012000.1:pep;Derives_from=LTnewLM_150012000.1;orthologous_to=LmjF.15.0600_mRNA;ortholog_cluster=OG0001236;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 265968 267536 . + . ID=LTnewLM_150012100:pseudogene;coverage=0.998;sequence_ID=0.958;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0610_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 265968 267536 . + . ID=LTnewLM_150012100.1;Parent=LTnewLM_150012100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 265968 267536 . + . ID=LTnewLM_150012100.1:pseudogenic_exon:1;Parent=LTnewLM_150012100.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 265968 267536 . + . ID=LTnewLM_150012100.1:pep;Derives_from=LTnewLM_150012100.1;orthologous_to=LmjF.15.0610_mRNA;ortholog_cluster=OG0007460;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_15 Pfam protein_match 266532 267101 . + . Parent=LTnewLM_150012100.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_15 AUGUSTUS gene 269945 271291 1 + . ID=LTnewLM_150012200 LTnewLM_15 AUGUSTUS mRNA 269945 271291 1 + . ID=LTnewLM_150012200.1;Parent=LTnewLM_150012200 LTnewLM_15 AUGUSTUS CDS 269945 271291 1 + 0 ID=LTnewLM_150012200.1:CDS:1;Parent=LTnewLM_150012200.1 ### LTnewLM_15 . polypeptide 269945 271291 . + . ID=LTnewLM_150012200.1:pep;Derives_from=LTnewLM_150012200.1;orthologous_to=LmjF.15.0620_mRNA;ortholog_cluster=OG0001237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 274820 278619 . + . ID=LTnewLM_150012300:pseudogene;coverage=0.990;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0630_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 274820 278619 . + . ID=LTnewLM_150012300.1;Parent=LTnewLM_150012300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 274820 278619 . + . ID=LTnewLM_150012300.1:pseudogenic_exon:1;Parent=LTnewLM_150012300.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 274820 278619 . + . ID=LTnewLM_150012300.1:pep;Derives_from=LTnewLM_150012300.1;orthologous_to=LmjF.15.0630_mRNA;ortholog_cluster=OG0007461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 283734 287926 . + . ID=LTnewLM_150012400:pseudogene;coverage=0.994;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0640_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 283734 287926 . + . ID=LTnewLM_150012400.1;Parent=LTnewLM_150012400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 283734 287926 . + . ID=LTnewLM_150012400.1:pseudogenic_exon:1;Parent=LTnewLM_150012400.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 283734 287926 . + . ID=LTnewLM_150012400.1:pep;Derives_from=LTnewLM_150012400.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 292478 294593 0.94 + . ID=LTnewLM_150012500 LTnewLM_15 AUGUSTUS mRNA 292478 294593 0.94 + . ID=LTnewLM_150012500.1;Parent=LTnewLM_150012500 LTnewLM_15 AUGUSTUS CDS 292478 293441 0.94 + 0 ID=LTnewLM_150012500.1:CDS:1;Parent=LTnewLM_150012500.1 LTnewLM_15 AUGUSTUS CDS 293542 294593 0.94 + 2 ID=LTnewLM_150012500.1:CDS:2;Parent=LTnewLM_150012500.1 ### LTnewLM_15 . polypeptide 292478 294593 . + . ID=LTnewLM_150012500.1:pep;Derives_from=LTnewLM_150012500.1;orthologous_to=LmjF.15.0650_mRNA;ortholog_cluster=OG0001238;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 Liftoff gene 299328 301073 . + . ID=LTnewLM_150012600;coverage=0.996;sequence_ID=0.954;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.15.0660_0 LTnewLM_15 Liftoff mRNA 299328 301073 . + . ID=LTnewLM_150012600.1;Parent=LTnewLM_150012600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_15 Liftoff CDS 299328 301073 . + 0 ID=LTnewLM_150012600.1:CDS:1;Parent=LTnewLM_150012600.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 299328 301073 . + . ID=LTnewLM_150012600.1:pep;Derives_from=LTnewLM_150012600.1;orthologous_to=LmjF.15.0660_mRNA;ortholog_cluster=OG0001239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 303768 306883 . + . ID=LTnewLM_150012700:pseudogene;coverage=0.996;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0670_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 303768 306883 . + . ID=LTnewLM_150012700.1;Parent=LTnewLM_150012700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 303768 306883 . + . ID=LTnewLM_150012700.1:pseudogenic_exon:1;Parent=LTnewLM_150012700.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 303768 306883 . + . ID=LTnewLM_150012700.1:pep;Derives_from=LTnewLM_150012700.1;orthologous_to=LmjF.15.0670_mRNA;ortholog_cluster=OG0007462;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 307583 308188 1 + . ID=LTnewLM_150012800 LTnewLM_15 AUGUSTUS mRNA 307583 308188 1 + . ID=LTnewLM_150012800.1;Parent=LTnewLM_150012800 LTnewLM_15 AUGUSTUS CDS 307583 308188 1 + 0 ID=LTnewLM_150012800.1:CDS:1;Parent=LTnewLM_150012800.1 ### LTnewLM_15 . polypeptide 307583 308188 . + . ID=LTnewLM_150012800.1:pep;Derives_from=LTnewLM_150012800.1;orthologous_to=LmjF.15.0680_mRNA;ortholog_cluster=OG0001240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 308937 310412 1 + . ID=LTnewLM_150012900 LTnewLM_15 AUGUSTUS mRNA 308937 310412 1 + . ID=LTnewLM_150012900.1;Parent=LTnewLM_150012900 LTnewLM_15 AUGUSTUS CDS 308937 310412 1 + 0 ID=LTnewLM_150012900.1:CDS:1;Parent=LTnewLM_150012900.1 ### LTnewLM_15 . polypeptide 308937 310412 . + . ID=LTnewLM_150012900.1:pep;Derives_from=LTnewLM_150012900.1;orthologous_to=LmjF.15.0690_mRNA;ortholog_cluster=OG0001241;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 311614 314736 1 + . ID=LTnewLM_150013000 LTnewLM_15 AUGUSTUS mRNA 311614 314736 1 + . ID=LTnewLM_150013000.1;Parent=LTnewLM_150013000 LTnewLM_15 AUGUSTUS CDS 311614 314736 1 + 0 ID=LTnewLM_150013000.1:CDS:1;Parent=LTnewLM_150013000.1 ### LTnewLM_15 . polypeptide 311614 314736 . + . ID=LTnewLM_150013000.1:pep;Derives_from=LTnewLM_150013000.1;orthologous_to=LmjF.15.0700_mRNA;ortholog_cluster=OG0001242;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 315655 325745 . + . ID=LTnewLM_150013100:pseudogene;coverage=0.998;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0710_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 315655 325745 . + . ID=LTnewLM_150013100.1;Parent=LTnewLM_150013100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 315655 325745 . + . ID=LTnewLM_150013100.1:pseudogenic_exon:1;Parent=LTnewLM_150013100.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 315655 325745 . + . ID=LTnewLM_150013100.1:pep;Derives_from=LTnewLM_150013100.1;orthologous_to=LmjF.15.0710_mRNA;ortholog_cluster=OG0007463;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 326356 328323 1 + . ID=LTnewLM_150013200 LTnewLM_15 AUGUSTUS mRNA 326356 328323 1 + . ID=LTnewLM_150013200.1;Parent=LTnewLM_150013200 LTnewLM_15 AUGUSTUS CDS 326356 328323 1 + 0 ID=LTnewLM_150013200.1:CDS:1;Parent=LTnewLM_150013200.1 ### LTnewLM_15 . polypeptide 326356 328323 . + . ID=LTnewLM_150013200.1:pep;Derives_from=LTnewLM_150013200.1;orthologous_to=LmjF.15.0720_mRNA;ortholog_cluster=OG0001243;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 Liftoff gene 329270 330400 . + . ID=LTnewLM_150013300;coverage=1.0;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0730_0 LTnewLM_15 Liftoff mRNA 329270 330400 . + . ID=LTnewLM_150013300.1;Parent=LTnewLM_150013300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_15 Liftoff CDS 329270 330400 . + 0 ID=LTnewLM_150013300.1:CDS:1;Parent=LTnewLM_150013300.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 329270 330400 . + . ID=LTnewLM_150013300.1:pep;Derives_from=LTnewLM_150013300.1;orthologous_to=LmjF.15.0730_mRNA;ortholog_cluster=OG0001244;product=term%3DLysine methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294 LTnewLM_15 Pfam protein_match 329768 329986 . + . Parent=LTnewLM_150013300.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_15 AUGUSTUS gene 330937 331362 1 + . ID=LTnewLM_150013400 LTnewLM_15 AUGUSTUS mRNA 330937 331362 1 + . ID=LTnewLM_150013400.1;Parent=LTnewLM_150013400 LTnewLM_15 AUGUSTUS CDS 330937 331037 1 + 0 ID=LTnewLM_150013400.1:CDS:1;Parent=LTnewLM_150013400.1 LTnewLM_15 AUGUSTUS CDS 331191 331362 1 + 1 ID=LTnewLM_150013400.1:CDS:2;Parent=LTnewLM_150013400.1 ### LTnewLM_15 . polypeptide 330937 331362 . + . ID=LTnewLM_150013400.1:pep;Derives_from=LTnewLM_150013400.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 331416 331913 1 + . ID=LTnewLM_150013500 LTnewLM_15 AUGUSTUS mRNA 331416 331913 1 + . ID=LTnewLM_150013500.1;Parent=LTnewLM_150013500 LTnewLM_15 AUGUSTUS CDS 331416 331913 1 + 0 ID=LTnewLM_150013500.1:CDS:1;Parent=LTnewLM_150013500.1 ### LTnewLM_15 . polypeptide 331416 331913 . + . ID=LTnewLM_150013500.1:pep;Derives_from=LTnewLM_150013500.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 333136 333588 1 + . ID=LTnewLM_150013600 LTnewLM_15 AUGUSTUS mRNA 333136 333588 1 + . ID=LTnewLM_150013600.1;Parent=LTnewLM_150013600 LTnewLM_15 AUGUSTUS CDS 333136 333588 1 + 0 ID=LTnewLM_150013600.1:CDS:1;Parent=LTnewLM_150013600.1 ### LTnewLM_15 . polypeptide 333136 333588 . + . ID=LTnewLM_150013600.1:pep;Derives_from=LTnewLM_150013600.1;orthologous_to=LmjF.15.0740_mRNA;ortholog_cluster=OG0001245;product=term%3DProtein of unknown function (DUF2871)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11070 LTnewLM_15 Pfam protein_match 333136 333522 . + . Parent=LTnewLM_150013600.1:pep;Name=PF11070;signature_desc=Protein of unknown function (DUF2871) ### LTnewLM_15 Aragorn_1.2.36 gene 334341 334413 . + . ID=LTnewLM_150013700 LTnewLM_15 Aragorn_1.2.36 tRNA 334341 334413 . + . ID=LTnewLM_150013700:tRNA;Parent=LTnewLM_150013700;aa=Asp;anticodon=gtc;gc_content=58.9 ### LTnewLM_15 Aragorn_1.2.36 gene 334452 334525 . - . ID=LTnewLM_150013800 LTnewLM_15 Aragorn_1.2.36 tRNA 334452 334525 . - . ID=LTnewLM_150013800:tRNA;Parent=LTnewLM_150013800;aa=Glu;anticodon=ctc;gc_content=58.1 ### LTnewLM_15 Liftoff gene 334599 334718 . + . ID=LTnewLM_150013900;coverage=1.0;sequence_ID=0.983;extra_copy_number=0;copy_num_ID=LmjF.09.5SrRNA.03_0 LTnewLM_15 Liftoff rRNA 334599 334718 . + . ID=LTnewLM_150013900:rRNA;Parent=LTnewLM_150013900;extra_copy_number=0 ### LTnewLM_15 GenomeTools gene 334600 334718 90.2 + . ID=LTnewLM_150014000 LTnewLM_15 INFERNAL rRNA 334600 334718 90.2 + . ID=LTnewLM_150014000:rRNA;Parent=LTnewLM_150014000;gc=0.50;evalue=1.4e-19;score=90.2;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_15 AUGUSTUS gene 341697 343646 1 - . ID=LTnewLM_150014100 LTnewLM_15 AUGUSTUS mRNA 341697 343646 1 - . ID=LTnewLM_150014100.1;Parent=LTnewLM_150014100 LTnewLM_15 AUGUSTUS CDS 341697 343646 1 - 0 ID=LTnewLM_150014100.1:CDS:1;Parent=LTnewLM_150014100.1 ### LTnewLM_15 . polypeptide 341697 343646 . - . ID=LTnewLM_150014100.1:pep;Derives_from=LTnewLM_150014100.1;orthologous_to=LmjF.15.0750_mRNA;ortholog_cluster=OG0001246;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 347091 355145 . - . ID=LTnewLM_150014200:pseudogene;coverage=0.997;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.0760_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 347091 355145 . - . ID=LTnewLM_150014200.1;Parent=LTnewLM_150014200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 347091 355145 . - . ID=LTnewLM_150014200.1:pseudogenic_exon:1;Parent=LTnewLM_150014200.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 347091 355145 . - . ID=LTnewLM_150014200.1:pep;Derives_from=LTnewLM_150014200.1;orthologous_to=LmjF.15.0760_mRNA;ortholog_cluster=OG0007464;product=term%3DABC-2 family transporter protein/ABC transporter/AAA domain%2C putative AbiEii toxin%2C Type IV TA system%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005|Pfam:PF13304;Ontology_term=GO:0016887,GO:0005524 LTnewLM_15 Pfam protein_match 348189 348374 . - . Parent=LTnewLM_150014200.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 348276 348701 . - . Parent=LTnewLM_150014200.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_15 Pfam protein_match 349599 350465 . - . Parent=LTnewLM_150014200.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_15 Pfam protein_match 352230 352661 . - . Parent=LTnewLM_150014200.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_15 Pfam protein_match 353031 354023 . - . Parent=LTnewLM_150014200.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_15 AUGUSTUS gene 356574 356819 1 - . ID=LTnewLM_150014300 LTnewLM_15 AUGUSTUS mRNA 356574 356819 1 - . ID=LTnewLM_150014300.1;Parent=LTnewLM_150014300 LTnewLM_15 AUGUSTUS CDS 356574 356819 1 - 0 ID=LTnewLM_150014300.1:CDS:1;Parent=LTnewLM_150014300.1 ### LTnewLM_15 . polypeptide 356574 356819 . - . ID=LTnewLM_150014300.1:pep;Derives_from=LTnewLM_150014300.1;orthologous_to=LTnewLM_170021300.1,LTnewLM_360035000.1;ortholog_cluster=OG0000340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 359741 361711 1 - . ID=LTnewLM_150014400 LTnewLM_15 AUGUSTUS mRNA 359741 361711 1 - . ID=LTnewLM_150014400.1;Parent=LTnewLM_150014400 LTnewLM_15 AUGUSTUS CDS 359741 361711 1 - 0 ID=LTnewLM_150014400.1:CDS:1;Parent=LTnewLM_150014400.1 ### LTnewLM_15 . polypeptide 359741 361711 . - . ID=LTnewLM_150014400.1:pep;Derives_from=LTnewLM_150014400.1;orthologous_to=LmjF.15.0770_mRNA;ortholog_cluster=OG0001247;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_15 Pfam protein_match 360728 361522 . - . Parent=LTnewLM_150014400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_15 Pfam protein_match 360866 361408 . - . Parent=LTnewLM_150014400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_15 AUGUSTUS gene 362852 363952 1 - . ID=LTnewLM_150014500 LTnewLM_15 AUGUSTUS mRNA 362852 363952 1 - . ID=LTnewLM_150014500.1;Parent=LTnewLM_150014500 LTnewLM_15 AUGUSTUS CDS 362852 363952 1 - 0 ID=LTnewLM_150014500.1:CDS:1;Parent=LTnewLM_150014500.1 ### LTnewLM_15 . polypeptide 362852 363952 . - . ID=LTnewLM_150014500.1:pep;Derives_from=LTnewLM_150014500.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 364713 366680 1 - . ID=LTnewLM_150014600 LTnewLM_15 AUGUSTUS mRNA 364713 366680 1 - . ID=LTnewLM_150014600.1;Parent=LTnewLM_150014600 LTnewLM_15 AUGUSTUS CDS 364713 366680 1 - 0 ID=LTnewLM_150014600.1:CDS:1;Parent=LTnewLM_150014600.1 ### LTnewLM_15 . polypeptide 364713 366680 . - . ID=LTnewLM_150014600.1:pep;Derives_from=LTnewLM_150014600.1;orthologous_to=LmjF.15.0780_mRNA;ortholog_cluster=OG0001248;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . pseudogene 367935 372361 6.76e+03 - . ID=LTnewLM_150014700:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.15.0790:mRNA 2 1424;original_prot_length=1424 LTnewLM_15 . pseudogenic_transcript 367935 372361 . - . ID=LTnewLM_150014700.1;Parent=LTnewLM_150014700:pseudogene LTnewLM_15 . pseudogenic_exon 367935 368036 . - . ID=LTnewLM_150014700.1:pseudogenic_exon:1;Parent=LTnewLM_150014700.1 LTnewLM_15 . pseudogenic_exon 368042 372361 . - . ID=LTnewLM_150014700.1:pseudogenic_exon:2;Parent=LTnewLM_150014700.1 ### LTnewLM_15 . polypeptide 367935 372361 . - . ID=LTnewLM_150014700.1:pep;Derives_from=LTnewLM_150014700.1;orthologous_to=LmjF.15.0790_mRNA;ortholog_cluster=OG0007465;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 372691 373701 1 - . ID=LTnewLM_150014800 LTnewLM_15 AUGUSTUS mRNA 372691 373701 1 - . ID=LTnewLM_150014800.1;Parent=LTnewLM_150014800 LTnewLM_15 AUGUSTUS CDS 372691 373701 1 - 0 ID=LTnewLM_150014800.1:CDS:1;Parent=LTnewLM_150014800.1 ### LTnewLM_15 . polypeptide 372691 373701 . - . ID=LTnewLM_150014800.1:pep;Derives_from=LTnewLM_150014800.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 374893 381135 1 - . ID=LTnewLM_150014900 LTnewLM_15 AUGUSTUS mRNA 374893 381135 1 - . ID=LTnewLM_150014900.1;Parent=LTnewLM_150014900 LTnewLM_15 AUGUSTUS CDS 374893 381135 1 - 0 ID=LTnewLM_150014900.1:CDS:1;Parent=LTnewLM_150014900.1 ### LTnewLM_15 . polypeptide 374893 381135 . - . ID=LTnewLM_150014900.1:pep;Derives_from=LTnewLM_150014900.1;orthologous_to=LmjF.15.0800_mRNA;ortholog_cluster=OG0001249;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 382601 384292 1 - . ID=LTnewLM_150015000 LTnewLM_15 AUGUSTUS mRNA 382601 384292 1 - . ID=LTnewLM_150015000.1;Parent=LTnewLM_150015000 LTnewLM_15 AUGUSTUS CDS 382601 384292 1 - 0 ID=LTnewLM_150015000.1:CDS:1;Parent=LTnewLM_150015000.1 ### LTnewLM_15 . polypeptide 382601 384292 . - . ID=LTnewLM_150015000.1:pep;Derives_from=LTnewLM_150015000.1;orthologous_to=LmjF.15.0810_mRNA;ortholog_cluster=OG0001250;product=term%3DPeroxisomal membrane protein (Pex16)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08610 LTnewLM_15 Pfam protein_match 383837 384166 . - . Parent=LTnewLM_150015000.1:pep;Name=PF08610;signature_desc=Peroxisomal membrane protein (Pex16) ### LTnewLM_15 AUGUSTUS gene 385174 385509 1 - . ID=LTnewLM_150015100 LTnewLM_15 AUGUSTUS mRNA 385174 385509 1 - . ID=LTnewLM_150015100.1;Parent=LTnewLM_150015100 LTnewLM_15 AUGUSTUS CDS 385174 385509 1 - 0 ID=LTnewLM_150015100.1:CDS:1;Parent=LTnewLM_150015100.1 ### LTnewLM_15 . polypeptide 385174 385509 . - . ID=LTnewLM_150015100.1:pep;Derives_from=LTnewLM_150015100.1;orthologous_to=LmjF.15.0815_mRNA;ortholog_cluster=OG0001251;product=term%3DDolichol phosphate-mannose biosynthesis regulatory protein (DPM2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07297;Ontology_term=GO:0009059,GO:0030176 LTnewLM_15 Pfam protein_match 385306 385503 . - . Parent=LTnewLM_150015100.1:pep;Name=PF07297;signature_desc=Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2);Ontology_term=GO:0009059,GO:0030176 ### LTnewLM_15 AUGUSTUS gene 386263 389397 1 - . ID=LTnewLM_150015200 LTnewLM_15 AUGUSTUS mRNA 386263 389397 1 - . ID=LTnewLM_150015200.1;Parent=LTnewLM_150015200 LTnewLM_15 AUGUSTUS CDS 386263 389397 1 - 0 ID=LTnewLM_150015200.1:CDS:1;Parent=LTnewLM_150015200.1 ### LTnewLM_15 . polypeptide 386263 389397 . - . ID=LTnewLM_150015200.1:pep;Derives_from=LTnewLM_150015200.1;orthologous_to=LmjF.15.0820_mRNA;ortholog_cluster=OG0001252;product=term%3DLysine methyltransferase/GDP dissociation inhibitor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294|Pfam:PF00996 LTnewLM_15 Pfam protein_match 387337 387543 . - . Parent=LTnewLM_150015200.1:pep;Name=PF00996;signature_desc=GDP dissociation inhibitor LTnewLM_15 Pfam protein_match 387874 388383 . - . Parent=LTnewLM_150015200.1:pep;Name=PF00996;signature_desc=GDP dissociation inhibitor LTnewLM_15 Pfam protein_match 388906 389142 . - . Parent=LTnewLM_150015200.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_15 AUGUSTUS gene 390121 391431 1 - . ID=LTnewLM_150015300 LTnewLM_15 AUGUSTUS mRNA 390121 391431 1 - . ID=LTnewLM_150015300.1;Parent=LTnewLM_150015300 LTnewLM_15 AUGUSTUS CDS 390121 391431 1 - 0 ID=LTnewLM_150015300.1:CDS:1;Parent=LTnewLM_150015300.1 ### LTnewLM_15 . polypeptide 390121 391431 . - . ID=LTnewLM_150015300.1:pep;Derives_from=LTnewLM_150015300.1;orthologous_to=LmjF.15.0825_mRNA;ortholog_cluster=OG0001253;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 392263 394743 1 - . ID=LTnewLM_150015400 LTnewLM_15 AUGUSTUS mRNA 392263 394743 1 - . ID=LTnewLM_150015400.1;Parent=LTnewLM_150015400 LTnewLM_15 AUGUSTUS CDS 392263 394743 1 - 0 ID=LTnewLM_150015400.1:CDS:1;Parent=LTnewLM_150015400.1 ### LTnewLM_15 . polypeptide 392263 394743 . - . ID=LTnewLM_150015400.1:pep;Derives_from=LTnewLM_150015400.1;orthologous_to=LmjF.15.0830_mRNA;ortholog_cluster=OG0001254;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 395909 398803 1 - . ID=LTnewLM_150015500 LTnewLM_15 AUGUSTUS mRNA 395909 398803 1 - . ID=LTnewLM_150015500.1;Parent=LTnewLM_150015500 LTnewLM_15 AUGUSTUS CDS 395909 398803 1 - 0 ID=LTnewLM_150015500.1:CDS:1;Parent=LTnewLM_150015500.1 ### LTnewLM_15 . polypeptide 395909 398803 . - . ID=LTnewLM_150015500.1:pep;Derives_from=LTnewLM_150015500.1;orthologous_to=LmjF.15.0850_mRNA;ortholog_cluster=OG0001255;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 399853 400056 1 - . ID=LTnewLM_150015600 LTnewLM_15 AUGUSTUS mRNA 399853 400056 1 - . ID=LTnewLM_150015600.1;Parent=LTnewLM_150015600 LTnewLM_15 AUGUSTUS CDS 399853 400056 1 - 0 ID=LTnewLM_150015600.1:CDS:1;Parent=LTnewLM_150015600.1 ### LTnewLM_15 . polypeptide 399853 400056 . - . ID=LTnewLM_150015600.1:pep;Derives_from=LTnewLM_150015600.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 400386 400819 0.48 - . ID=LTnewLM_150015700 LTnewLM_15 AUGUSTUS mRNA 400386 400819 0.48 - . ID=LTnewLM_150015700.1;Parent=LTnewLM_150015700 LTnewLM_15 AUGUSTUS CDS 400386 400416 0.48 - 1 ID=LTnewLM_150015700.1:CDS:1;Parent=LTnewLM_150015700.1 LTnewLM_15 AUGUSTUS CDS 400497 400819 0.48 - 0 ID=LTnewLM_150015700.1:CDS:2;Parent=LTnewLM_150015700.1 ### LTnewLM_15 . polypeptide 400386 400819 . - . ID=LTnewLM_150015700.1:pep;Derives_from=LTnewLM_150015700.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 401161 402132 1 - . ID=LTnewLM_150015800 LTnewLM_15 AUGUSTUS mRNA 401161 402132 1 - . ID=LTnewLM_150015800.1;Parent=LTnewLM_150015800 LTnewLM_15 AUGUSTUS CDS 401161 402132 1 - 0 ID=LTnewLM_150015800.1:CDS:1;Parent=LTnewLM_150015800.1 ### LTnewLM_15 . polypeptide 401161 402132 . - . ID=LTnewLM_150015800.1:pep;Derives_from=LTnewLM_150015800.1;orthologous_to=LmjF.15.0860_mRNA;ortholog_cluster=OG0001256;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 402591 404468 1 - . ID=LTnewLM_150015900 LTnewLM_15 AUGUSTUS mRNA 402591 404468 1 - . ID=LTnewLM_150015900.1;Parent=LTnewLM_150015900 LTnewLM_15 AUGUSTUS CDS 402591 404468 1 - 0 ID=LTnewLM_150015900.1:CDS:1;Parent=LTnewLM_150015900.1 ### LTnewLM_15 . polypeptide 402591 404468 . - . ID=LTnewLM_150015900.1:pep;Derives_from=LTnewLM_150015900.1;orthologous_to=LmjF.15.0870_mRNA;ortholog_cluster=OG0001257;product=term%3DSugar (and other) transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_15 Pfam protein_match 403707 404207 . - . Parent=LTnewLM_150015900.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 405566 406981 1 - . ID=LTnewLM_150016000 LTnewLM_15 AUGUSTUS mRNA 405566 406981 1 - . ID=LTnewLM_150016000.1;Parent=LTnewLM_150016000 LTnewLM_15 AUGUSTUS CDS 405566 406981 1 - 0 ID=LTnewLM_150016000.1:CDS:1;Parent=LTnewLM_150016000.1 ### LTnewLM_15 . polypeptide 405566 406981 . - . ID=LTnewLM_150016000.1:pep;Derives_from=LTnewLM_150016000.1;orthologous_to=LmjF.15.0880_mRNA;ortholog_cluster=OG0001258;product=term%3DInositol monophosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00459;Ontology_term=GO:0046854 LTnewLM_15 Pfam protein_match 405620 406093 . - . Parent=LTnewLM_150016000.1:pep;Name=PF00459;signature_desc=Inositol monophosphatase family;Ontology_term=GO:0046854 LTnewLM_15 Pfam protein_match 406355 406828 . - . Parent=LTnewLM_150016000.1:pep;Name=PF00459;signature_desc=Inositol monophosphatase family;Ontology_term=GO:0046854 ### LTnewLM_15 AUGUSTUS gene 410612 412837 1 - . ID=LTnewLM_150016100 LTnewLM_15 AUGUSTUS mRNA 410612 412837 1 - . ID=LTnewLM_150016100.1;Parent=LTnewLM_150016100 LTnewLM_15 AUGUSTUS CDS 410612 412837 1 - 0 ID=LTnewLM_150016100.1:CDS:1;Parent=LTnewLM_150016100.1 ### LTnewLM_15 . polypeptide 410612 412837 . - . ID=LTnewLM_150016100.1:pep;Derives_from=LTnewLM_150016100.1;orthologous_to=LmjF.15.0890_mRNA;ortholog_cluster=OG0001259;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF19055|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_15 Pfam protein_match 411104 411733 . - . Parent=LTnewLM_150016100.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 LTnewLM_15 Pfam protein_match 411902 412069 . - . Parent=LTnewLM_150016100.1:pep;Name=PF19055;signature_desc=ABC-2 type transporter LTnewLM_15 Pfam protein_match 412163 412609 . - . Parent=LTnewLM_150016100.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_15 . pseudogene 414268 415912 3e+03 - . ID=LTnewLM_150016200:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.15.0900:mRNA 3 551;original_prot_length=552 LTnewLM_15 . pseudogenic_transcript 414268 415912 . - . ID=LTnewLM_150016200.1;Parent=LTnewLM_150016200:pseudogene LTnewLM_15 . pseudogenic_exon 414268 415860 . - . ID=LTnewLM_150016200.1:pseudogenic_exon:1;Parent=LTnewLM_150016200.1 LTnewLM_15 . pseudogenic_exon 415862 415912 . - . ID=LTnewLM_150016200.1:pseudogenic_exon:2;Parent=LTnewLM_150016200.1 ### LTnewLM_15 . polypeptide 414268 415912 . - . ID=LTnewLM_150016200.1:pep;Derives_from=LTnewLM_150016200.1;orthologous_to=LmjF.15.0900_mRNA;ortholog_cluster=OG0007466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 416616 424229 1 - . ID=LTnewLM_150016300 LTnewLM_15 AUGUSTUS mRNA 416616 424229 1 - . ID=LTnewLM_150016300.1;Parent=LTnewLM_150016300 LTnewLM_15 AUGUSTUS CDS 416616 424229 1 - 0 ID=LTnewLM_150016300.1:CDS:1;Parent=LTnewLM_150016300.1 ### LTnewLM_15 . polypeptide 416616 424229 . - . ID=LTnewLM_150016300.1:pep;Derives_from=LTnewLM_150016300.1;orthologous_to=LmjF.15.0910_mRNA;ortholog_cluster=OG0001260;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 425425 428235 1 - . ID=LTnewLM_150016400 LTnewLM_15 AUGUSTUS mRNA 425425 428235 1 - . ID=LTnewLM_150016400.1;Parent=LTnewLM_150016400 LTnewLM_15 AUGUSTUS CDS 425425 428235 1 - 0 ID=LTnewLM_150016400.1:CDS:1;Parent=LTnewLM_150016400.1 ### LTnewLM_15 . polypeptide 425425 428235 . - . ID=LTnewLM_150016400.1:pep;Derives_from=LTnewLM_150016400.1;orthologous_to=LmjF.15.0920_mRNA;ortholog_cluster=OG0001261;product=term%3DHEAT repeat/HEAT repeats%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02985|Pfam:PF13646;Ontology_term=GO:0005515 LTnewLM_15 Pfam protein_match 426349 426645 . - . Parent=LTnewLM_150016400.1:pep;Name=PF13646;signature_desc=HEAT repeats LTnewLM_15 Pfam protein_match 426673 426756 . - . Parent=LTnewLM_150016400.1:pep;Name=PF02985;signature_desc=HEAT repeat;Ontology_term=GO:0005515 ### LTnewLM_15 AUGUSTUS gene 430272 430841 1 - . ID=LTnewLM_150016500 LTnewLM_15 AUGUSTUS mRNA 430272 430841 1 - . ID=LTnewLM_150016500.1;Parent=LTnewLM_150016500 LTnewLM_15 AUGUSTUS CDS 430272 430841 1 - 0 ID=LTnewLM_150016500.1:CDS:1;Parent=LTnewLM_150016500.1 ### LTnewLM_15 . polypeptide 430272 430841 . - . ID=LTnewLM_150016500.1:pep;Derives_from=LTnewLM_150016500.1;orthologous_to=LmjF.15.0930_mRNA;ortholog_cluster=OG0001262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 431737 435351 1 - . ID=LTnewLM_150016600 LTnewLM_15 AUGUSTUS mRNA 431737 435351 1 - . ID=LTnewLM_150016600.1;Parent=LTnewLM_150016600 LTnewLM_15 AUGUSTUS CDS 431737 435351 1 - 0 ID=LTnewLM_150016600.1:CDS:1;Parent=LTnewLM_150016600.1 ### LTnewLM_15 . polypeptide 431737 435351 . - . ID=LTnewLM_150016600.1:pep;Derives_from=LTnewLM_150016600.1;orthologous_to=LmjF.15.0940_mRNA;ortholog_cluster=OG0001263;product=term%3DMicrotubule associated protein (MAP65/ASE1 family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03999;Ontology_term=GO:0000910,GO:0008017,GO:0000226 LTnewLM_15 Pfam protein_match 432520 432780 . - . Parent=LTnewLM_150016600.1:pep;Name=PF03999;signature_desc=Microtubule associated protein (MAP65/ASE1 family);Ontology_term=GO:0008017,GO:0000226,GO:0000910 ### LTnewLM_15 AUGUSTUS gene 436581 437240 1 - . ID=LTnewLM_150016700 LTnewLM_15 AUGUSTUS mRNA 436581 437240 1 - . ID=LTnewLM_150016700.1;Parent=LTnewLM_150016700 LTnewLM_15 AUGUSTUS CDS 436581 437240 1 - 0 ID=LTnewLM_150016700.1:CDS:1;Parent=LTnewLM_150016700.1 ### LTnewLM_15 . polypeptide 436581 437240 . - . ID=LTnewLM_150016700.1:pep;Derives_from=LTnewLM_150016700.1;orthologous_to=LTnewLM_330016000.1,LmjF.15.0950_mRNA,LmjF.33.0920_mRNA;ortholog_cluster=OG0000126;product=term%3DKH domain/Ribosomal protein S3%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07650|Pfam:PF00189;Ontology_term=GO:0003723,GO:0006412,GO:0003735,GO:0005840 LTnewLM_15 Pfam protein_match 436683 436925 . - . Parent=LTnewLM_150016700.1:pep;Name=PF00189;signature_desc=Ribosomal protein S3%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_15 Pfam protein_match 436971 437180 . - . Parent=LTnewLM_150016700.1:pep;Name=PF07650;signature_desc=KH domain;Ontology_term=GO:0003723 ### LTnewLM_15 AUGUSTUS gene 438380 438859 1 - . ID=LTnewLM_150016800 LTnewLM_15 AUGUSTUS mRNA 438380 438859 1 - . ID=LTnewLM_150016800.1;Parent=LTnewLM_150016800 LTnewLM_15 AUGUSTUS CDS 438380 438859 1 - 0 ID=LTnewLM_150016800.1:CDS:1;Parent=LTnewLM_150016800.1 ### LTnewLM_15 . polypeptide 438380 438859 . - . ID=LTnewLM_150016800.1:pep;Derives_from=LTnewLM_150016800.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 439817 440755 1 - . ID=LTnewLM_150016900 LTnewLM_15 AUGUSTUS mRNA 439817 440755 1 - . ID=LTnewLM_150016900.1;Parent=LTnewLM_150016900 LTnewLM_15 AUGUSTUS CDS 439817 440755 1 - 0 ID=LTnewLM_150016900.1:CDS:1;Parent=LTnewLM_150016900.1 ### LTnewLM_15 . polypeptide 439817 440755 . - . ID=LTnewLM_150016900.1:pep;Derives_from=LTnewLM_150016900.1;orthologous_to=LmjF.15.0960_mRNA;ortholog_cluster=OG0001264;product=term%3DErv1 / Alr family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04777;Ontology_term=GO:0016972,GO:0055114 LTnewLM_15 Pfam protein_match 440405 440680 . - . Parent=LTnewLM_150016900.1:pep;Name=PF04777;signature_desc=Erv1 / Alr family;Ontology_term=GO:0016972,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 441346 442548 1 - . ID=LTnewLM_150017000 LTnewLM_15 AUGUSTUS mRNA 441346 442548 1 - . ID=LTnewLM_150017000.1;Parent=LTnewLM_150017000 LTnewLM_15 AUGUSTUS CDS 441346 442548 1 - 0 ID=LTnewLM_150017000.1:CDS:1;Parent=LTnewLM_150017000.1 ### LTnewLM_15 . polypeptide 441346 442548 . - . ID=LTnewLM_150017000.1:pep;Derives_from=LTnewLM_150017000.1;orthologous_to=LmjF.15.0970_mRNA;ortholog_cluster=OG0001265;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_15 Pfam protein_match 441739 442485 . - . Parent=LTnewLM_150017000.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_15 . polypeptide 443265 445415 . - . ID=LTnewLM_150017100.1:pep;Derives_from=LTnewLM_150017100.1;orthologous_to=LmjF.15.0980_mRNA;ortholog_cluster=OG0001266;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 Liftoff gene 443265 445650 . - . ID=LTnewLM_150017100;coverage=0.987;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.15.0980_0 LTnewLM_15 Liftoff mRNA 443265 445650 . - . ID=LTnewLM_150017100.1;Parent=LTnewLM_150017100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_15 Liftoff CDS 443265 445415 . - 0 ID=LTnewLM_150017100.1:CDS:1;Parent=LTnewLM_150017100.1;extra_copy_number=0 LTnewLM_15 Liftoff five_prime_UTR 445416 445650 . - . ID=LTnewLM_150017100:five_prime_UTR;Parent=LTnewLM_150017100.1;extra_copy_number=0 ### LTnewLM_15 AUGUSTUS gene 446870 447463 1 - . ID=LTnewLM_150017200 LTnewLM_15 AUGUSTUS mRNA 446870 447463 1 - . ID=LTnewLM_150017200.1;Parent=LTnewLM_150017200 LTnewLM_15 AUGUSTUS CDS 446870 447463 1 - 0 ID=LTnewLM_150017200.1:CDS:1;Parent=LTnewLM_150017200.1 ### LTnewLM_15 . polypeptide 446870 447463 . - . ID=LTnewLM_150017200.1:pep;Derives_from=LTnewLM_150017200.1;orthologous_to=LmjF.15.0990_mRNA;ortholog_cluster=OG0001267;product=term%3D4Fe-4S dicluster domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13534 LTnewLM_15 Pfam protein_match 447008 447223 . - . Parent=LTnewLM_150017200.1:pep;Name=PF13534;signature_desc=4Fe-4S dicluster domain ### LTnewLM_15 AUGUSTUS gene 448023 448610 1 - . ID=LTnewLM_150017300 LTnewLM_15 AUGUSTUS mRNA 448023 448610 1 - . ID=LTnewLM_150017300.1;Parent=LTnewLM_150017300 LTnewLM_15 AUGUSTUS CDS 448023 448610 1 - 0 ID=LTnewLM_150017300.1:CDS:1;Parent=LTnewLM_150017300.1 ### LTnewLM_15 . polypeptide 448023 448610 . - . ID=LTnewLM_150017300.1:pep;Derives_from=LTnewLM_150017300.1;orthologous_to=LTnewLM_330013600.1,LmjF.33.0720_mRNA;ortholog_cluster=OG0000341;product=term%3DRibosomal protein L6e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01159;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_15 Pfam protein_match 448029 448400 . - . Parent=LTnewLM_150017300.1:pep;Name=PF01159;signature_desc=Ribosomal protein L6e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 450514 453576 1 - . ID=LTnewLM_150017400 LTnewLM_15 AUGUSTUS mRNA 450514 453576 1 - . ID=LTnewLM_150017400.1;Parent=LTnewLM_150017400 LTnewLM_15 AUGUSTUS CDS 450514 453576 1 - 0 ID=LTnewLM_150017400.1:CDS:1;Parent=LTnewLM_150017400.1 ### LTnewLM_15 . polypeptide 450514 453576 . - . ID=LTnewLM_150017400.1:pep;Derives_from=LTnewLM_150017400.1;orthologous_to=LmjF.15.1010_mRNA;ortholog_cluster=OG0001268;product=term%3DBacterial NAD-glutamate dehydrogenase/Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05088|Pfam:PF00208;Ontology_term=GO:0019551,GO:0016491,GO:0004352,GO:0006520,GO:0055114 LTnewLM_15 Pfam protein_match 450847 451683 . - . Parent=LTnewLM_150017400.1:pep;Name=PF00208;signature_desc=Glutamate/Leucine/Phenylalanine/Valine dehydrogenase;Ontology_term=GO:0016491,GO:0006520,GO:0055114 LTnewLM_15 Pfam protein_match 450949 451149 . - . Parent=LTnewLM_150017400.1:pep;Name=PF05088;signature_desc=Bacterial NAD-glutamate dehydrogenase;Ontology_term=GO:0004352,GO:0019551 LTnewLM_15 Pfam protein_match 451861 452445 . - . Parent=LTnewLM_150017400.1:pep;Name=PF05088;signature_desc=Bacterial NAD-glutamate dehydrogenase;Ontology_term=GO:0004352,GO:0019551 ### LTnewLM_15 AUGUSTUS gene 456631 457710 1 - . ID=LTnewLM_150017500 LTnewLM_15 AUGUSTUS mRNA 456631 457710 1 - . ID=LTnewLM_150017500.1;Parent=LTnewLM_150017500 LTnewLM_15 AUGUSTUS CDS 456631 457710 1 - 0 ID=LTnewLM_150017500.1:CDS:1;Parent=LTnewLM_150017500.1 ### LTnewLM_15 . polypeptide 456631 457710 . - . ID=LTnewLM_150017500.1:pep;Derives_from=LTnewLM_150017500.1;orthologous_to=LmjF.15.1020_mRNA;ortholog_cluster=OG0001269;product=term%3DPolyprenyl synthetase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00348;Ontology_term=GO:0008299 LTnewLM_15 Pfam protein_match 456784 457557 . - . Parent=LTnewLM_150017500.1:pep;Name=PF00348;signature_desc=Polyprenyl synthetase;Ontology_term=GO:0008299 ### LTnewLM_15 AUGUSTUS gene 458863 460533 0.91 - . ID=LTnewLM_150017600 LTnewLM_15 AUGUSTUS mRNA 458863 460533 0.91 - . ID=LTnewLM_150017600.1;Parent=LTnewLM_150017600 LTnewLM_15 AUGUSTUS CDS 458863 460533 0.91 - 0 ID=LTnewLM_150017600.1:CDS:1;Parent=LTnewLM_150017600.1 ### LTnewLM_15 . polypeptide 458863 460533 . - . ID=LTnewLM_150017600.1:pep;Derives_from=LTnewLM_150017600.1;orthologous_to=LmjF.15.1030_mRNA;ortholog_cluster=OG0001270;product=term%3DSKIP/SNW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02731;Ontology_term=GO:0005681,GO:0000398 LTnewLM_15 Pfam protein_match 459469 459744 . - . Parent=LTnewLM_150017600.1:pep;Name=PF02731;signature_desc=SKIP/SNW domain;Ontology_term=GO:0000398,GO:0005681 ### LTnewLM_15 AUGUSTUS gene 462526 463125 1 - . ID=LTnewLM_150017700 LTnewLM_15 AUGUSTUS mRNA 462526 463125 1 - . ID=LTnewLM_150017700.1;Parent=LTnewLM_150017700 LTnewLM_15 AUGUSTUS CDS 462526 463125 1 - 0 ID=LTnewLM_150017700.1:CDS:1;Parent=LTnewLM_150017700.1 ### LTnewLM_15 . polypeptide 462526 463125 . - . ID=LTnewLM_150017700.1:pep;Derives_from=LTnewLM_150017700.1;orthologous_to=LTnewLM_150017900.1,LTnewLM_150018100.1,LTnewLM_150018300.1,LTnewLM_150018500.1,LmjF.15.1040_mRNA,LmjF.15.1060_mRNA,LmjF.15.1100_mRNA,LmjF.15.1140_mRNA;ortholog_cluster=OG0000018;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_15 Pfam protein_match 462535 462642 . - . Parent=LTnewLM_150017700.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 LTnewLM_15 Pfam protein_match 462658 463101 . - . Parent=LTnewLM_150017700.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_15 Pfam protein_match 462706 463101 . - . Parent=LTnewLM_150017700.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 463768 464118 1 - . ID=LTnewLM_150017800 LTnewLM_15 AUGUSTUS mRNA 463768 464118 1 - . ID=LTnewLM_150017800.1;Parent=LTnewLM_150017800 LTnewLM_15 AUGUSTUS CDS 463768 464118 1 - 0 ID=LTnewLM_150017800.1:CDS:1;Parent=LTnewLM_150017800.1 ### LTnewLM_15 . polypeptide 463768 464118 . - . ID=LTnewLM_150017800.1:pep;Derives_from=LTnewLM_150017800.1;orthologous_to=LTnewLM_150018000.1,LTnewLM_150018200.1;ortholog_cluster=OG0000342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 465330 465899 1 - . ID=LTnewLM_150017900 LTnewLM_15 AUGUSTUS mRNA 465330 465899 1 - . ID=LTnewLM_150017900.1;Parent=LTnewLM_150017900 LTnewLM_15 AUGUSTUS CDS 465330 465899 1 - 0 ID=LTnewLM_150017900.1:CDS:1;Parent=LTnewLM_150017900.1 ### LTnewLM_15 . polypeptide 465330 465899 . - . ID=LTnewLM_150017900.1:pep;Derives_from=LTnewLM_150017900.1;orthologous_to=LTnewLM_150017700.1,LTnewLM_150018100.1,LTnewLM_150018300.1,LTnewLM_150018500.1,LmjF.15.1040_mRNA,LmjF.15.1060_mRNA,LmjF.15.1100_mRNA,LmjF.15.1140_mRNA;ortholog_cluster=OG0000018;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_15 Pfam protein_match 465342 465416 . - . Parent=LTnewLM_150017900.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 LTnewLM_15 Pfam protein_match 465435 465875 . - . Parent=LTnewLM_150017900.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_15 Pfam protein_match 465480 465875 . - . Parent=LTnewLM_150017900.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 466543 466893 1 - . ID=LTnewLM_150018000 LTnewLM_15 AUGUSTUS mRNA 466543 466893 1 - . ID=LTnewLM_150018000.1;Parent=LTnewLM_150018000 LTnewLM_15 AUGUSTUS CDS 466543 466893 1 - 0 ID=LTnewLM_150018000.1:CDS:1;Parent=LTnewLM_150018000.1 ### LTnewLM_15 . polypeptide 466543 466893 . - . ID=LTnewLM_150018000.1:pep;Derives_from=LTnewLM_150018000.1;orthologous_to=LTnewLM_150017800.1,LTnewLM_150018200.1;ortholog_cluster=OG0000342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 468132 468701 1 - . ID=LTnewLM_150018100 LTnewLM_15 AUGUSTUS mRNA 468132 468701 1 - . ID=LTnewLM_150018100.1;Parent=LTnewLM_150018100 LTnewLM_15 AUGUSTUS CDS 468132 468701 1 - 0 ID=LTnewLM_150018100.1:CDS:1;Parent=LTnewLM_150018100.1 ### LTnewLM_15 . polypeptide 468132 468701 . - . ID=LTnewLM_150018100.1:pep;Derives_from=LTnewLM_150018100.1;orthologous_to=LTnewLM_150017700.1,LTnewLM_150017900.1,LTnewLM_150018300.1,LTnewLM_150018500.1,LmjF.15.1040_mRNA,LmjF.15.1060_mRNA,LmjF.15.1100_mRNA,LmjF.15.1140_mRNA;ortholog_cluster=OG0000018;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_15 Pfam protein_match 468144 468218 . - . Parent=LTnewLM_150018100.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 LTnewLM_15 Pfam protein_match 468237 468677 . - . Parent=LTnewLM_150018100.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_15 Pfam protein_match 468282 468677 . - . Parent=LTnewLM_150018100.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 469345 469695 1 - . ID=LTnewLM_150018200 LTnewLM_15 AUGUSTUS mRNA 469345 469695 1 - . ID=LTnewLM_150018200.1;Parent=LTnewLM_150018200 LTnewLM_15 AUGUSTUS CDS 469345 469695 1 - 0 ID=LTnewLM_150018200.1:CDS:1;Parent=LTnewLM_150018200.1 ### LTnewLM_15 . polypeptide 469345 469695 . - . ID=LTnewLM_150018200.1:pep;Derives_from=LTnewLM_150018200.1;orthologous_to=LTnewLM_150017800.1,LTnewLM_150018000.1;ortholog_cluster=OG0000342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 470935 471504 1 - . ID=LTnewLM_150018300 LTnewLM_15 AUGUSTUS mRNA 470935 471504 1 - . ID=LTnewLM_150018300.1;Parent=LTnewLM_150018300 LTnewLM_15 AUGUSTUS CDS 470935 471504 1 - 0 ID=LTnewLM_150018300.1:CDS:1;Parent=LTnewLM_150018300.1 ### LTnewLM_15 . polypeptide 470935 471504 . - . ID=LTnewLM_150018300.1:pep;Derives_from=LTnewLM_150018300.1;orthologous_to=LTnewLM_150017700.1,LTnewLM_150017900.1,LTnewLM_150018100.1,LTnewLM_150018500.1,LmjF.15.1040_mRNA,LmjF.15.1060_mRNA,LmjF.15.1100_mRNA,LmjF.15.1140_mRNA;ortholog_cluster=OG0000018;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_15 Pfam protein_match 470947 471021 . - . Parent=LTnewLM_150018300.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 LTnewLM_15 Pfam protein_match 471037 471468 . - . Parent=LTnewLM_150018300.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_15 Pfam protein_match 471085 471477 . - . Parent=LTnewLM_150018300.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 472151 472501 1 - . ID=LTnewLM_150018400 LTnewLM_15 AUGUSTUS mRNA 472151 472501 1 - . ID=LTnewLM_150018400.1;Parent=LTnewLM_150018400 LTnewLM_15 AUGUSTUS CDS 472151 472501 1 - 0 ID=LTnewLM_150018400.1:CDS:1;Parent=LTnewLM_150018400.1 ### LTnewLM_15 . polypeptide 472151 472501 . - . ID=LTnewLM_150018400.1:pep;Derives_from=LTnewLM_150018400.1;orthologous_to=LmjF.15.1050_mRNA,LmjF.15.1070_mRNA,LmjF.15.1090_mRNA,LmjF.15.1110_mRNA,LmjF.15.1130_mRNA,LmjF.15.1150_mRNA;ortholog_cluster=OG0000036;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 474417 475016 1 - . ID=LTnewLM_150018500 LTnewLM_15 AUGUSTUS mRNA 474417 475016 1 - . ID=LTnewLM_150018500.1;Parent=LTnewLM_150018500 LTnewLM_15 AUGUSTUS CDS 474417 475016 1 - 0 ID=LTnewLM_150018500.1:CDS:1;Parent=LTnewLM_150018500.1 ### LTnewLM_15 . polypeptide 474417 475016 . - . ID=LTnewLM_150018500.1:pep;Derives_from=LTnewLM_150018500.1;orthologous_to=LTnewLM_150017700.1,LTnewLM_150017900.1,LTnewLM_150018100.1,LTnewLM_150018300.1,LmjF.15.1040_mRNA,LmjF.15.1060_mRNA,LmjF.15.1100_mRNA,LmjF.15.1140_mRNA;ortholog_cluster=OG0000018;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_15 Pfam protein_match 474429 474533 . - . Parent=LTnewLM_150018500.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 LTnewLM_15 Pfam protein_match 474549 474992 . - . Parent=LTnewLM_150018500.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_15 Pfam protein_match 474597 474992 . - . Parent=LTnewLM_150018500.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 ### LTnewLM_15 AUGUSTUS gene 476048 477334 1 - . ID=LTnewLM_150018600 LTnewLM_15 AUGUSTUS mRNA 476048 477334 1 - . ID=LTnewLM_150018600.1;Parent=LTnewLM_150018600 LTnewLM_15 AUGUSTUS CDS 476048 477334 1 - 0 ID=LTnewLM_150018600.1:CDS:1;Parent=LTnewLM_150018600.1 ### LTnewLM_15 . polypeptide 476048 477334 . - . ID=LTnewLM_150018600.1:pep;Derives_from=LTnewLM_150018600.1;orthologous_to=LmjF.15.1170_mRNA;ortholog_cluster=OG0001271;product=term%3DTranscription factor IIB C-terminal module 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18542 LTnewLM_15 Pfam protein_match 476669 476962 . - . Parent=LTnewLM_150018600.1:pep;Name=PF18542;signature_desc=Transcription factor IIB C-terminal module 1 ### LTnewLM_15 AUGUSTUS gene 478272 487881 1.19 - . ID=LTnewLM_150018700 LTnewLM_15 AUGUSTUS mRNA 478272 487881 0.63 - . ID=LTnewLM_150018700.1;Parent=LTnewLM_150018700 LTnewLM_15 AUGUSTUS CDS 478272 478853 0.65 - 0 ID=LTnewLM_150018700.1:CDS:1;Parent=LTnewLM_150018700.1 LTnewLM_15 AUGUSTUS CDS 478921 487881 0.63 - 0 ID=LTnewLM_150018700.1:CDS:2;Parent=LTnewLM_150018700.1 LTnewLM_15 AUGUSTUS mRNA 484589 487881 0.56 - . ID=LTnewLM_150018700.2;Parent=LTnewLM_150018700 LTnewLM_15 AUGUSTUS CDS 484589 484591 0.56 - 0 ID=LTnewLM_150018700.2:CDS:1;Parent=LTnewLM_150018700.2 LTnewLM_15 AUGUSTUS CDS 484654 487881 0.98 - 0 ID=LTnewLM_150018700.2:CDS:2;Parent=LTnewLM_150018700.2 ### LTnewLM_15 . polypeptide 478272 487881 . - . ID=LTnewLM_150018700.1:pep;Derives_from=LTnewLM_150018700.1;orthologous_to=LTnewLM_150018700.2,LmjF.15.1180_mRNA;ortholog_cluster=OG0000343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 . polypeptide 484589 487881 . - . ID=LTnewLM_150018700.2:pep;Derives_from=LTnewLM_150018700.2;orthologous_to=LTnewLM_150018700.1,LmjF.15.1180_mRNA;ortholog_cluster=OG0000343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 489197 492958 1 - . ID=LTnewLM_150018800 LTnewLM_15 AUGUSTUS mRNA 489197 492958 1 - . ID=LTnewLM_150018800.1;Parent=LTnewLM_150018800 LTnewLM_15 AUGUSTUS CDS 489197 492958 1 - 0 ID=LTnewLM_150018800.1:CDS:1;Parent=LTnewLM_150018800.1 ### LTnewLM_15 . polypeptide 489197 492958 . - . ID=LTnewLM_150018800.1:pep;Derives_from=LTnewLM_150018800.1;orthologous_to=LmjF.15.1190_mRNA;ortholog_cluster=OG0001272;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 493810 501840 1 - . ID=LTnewLM_150018900 LTnewLM_15 AUGUSTUS mRNA 493810 501840 1 - . ID=LTnewLM_150018900.1;Parent=LTnewLM_150018900 LTnewLM_15 AUGUSTUS CDS 493810 501840 1 - 0 ID=LTnewLM_150018900.1:CDS:1;Parent=LTnewLM_150018900.1 ### LTnewLM_15 . polypeptide 493810 501840 . - . ID=LTnewLM_150018900.1:pep;Derives_from=LTnewLM_150018900.1;orthologous_to=LmjF.15.1200_mRNA;ortholog_cluster=OG0001273;product=term%3DCyclic nucleotide-binding domain/PAS fold/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027|Pfam:PF00989|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524,GO:0006355 LTnewLM_15 Pfam protein_match 497146 497940 . - . Parent=LTnewLM_150018900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_15 Pfam protein_match 497158 497937 . - . Parent=LTnewLM_150018900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_15 Pfam protein_match 499552 499704 . - . Parent=LTnewLM_150018900.1:pep;Name=PF00989;signature_desc=PAS fold;Ontology_term=GO:0006355 LTnewLM_15 Pfam protein_match 500113 500355 . - . Parent=LTnewLM_150018900.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_15 Pfam protein_match 500467 500706 . - . Parent=LTnewLM_150018900.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_15 AUGUSTUS gene 504303 504638 1 - . ID=LTnewLM_150019000 LTnewLM_15 AUGUSTUS mRNA 504303 504638 1 - . ID=LTnewLM_150019000.1;Parent=LTnewLM_150019000 LTnewLM_15 AUGUSTUS CDS 504303 504638 1 - 0 ID=LTnewLM_150019000.1:CDS:1;Parent=LTnewLM_150019000.1 ### LTnewLM_15 . polypeptide 504303 504638 . - . ID=LTnewLM_150019000.1:pep;Derives_from=LTnewLM_150019000.1;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_15 Pfam protein_match 504312 504587 . - . Parent=LTnewLM_150019000.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 505640 505966 1 - . ID=LTnewLM_150019100 LTnewLM_15 AUGUSTUS mRNA 505640 505966 1 - . ID=LTnewLM_150019100.1;Parent=LTnewLM_150019100 LTnewLM_15 AUGUSTUS CDS 505640 505966 1 - 0 ID=LTnewLM_150019100.1:CDS:1;Parent=LTnewLM_150019100.1 ### LTnewLM_15 . polypeptide 505640 505966 . - . ID=LTnewLM_150019100.1:pep;Derives_from=LTnewLM_150019100.1;orthologous_to=LmjF.15.1203_mRNA,LmjF.15.1207_mRNA;ortholog_cluster=OG0000344;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_15 Pfam protein_match 505649 505915 . - . Parent=LTnewLM_150019100.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_15 AUGUSTUS gene 506820 509198 1 - . ID=LTnewLM_150019200 LTnewLM_15 AUGUSTUS mRNA 506820 509198 1 - . ID=LTnewLM_150019200.1;Parent=LTnewLM_150019200 LTnewLM_15 AUGUSTUS CDS 506820 509198 1 - 0 ID=LTnewLM_150019200.1:CDS:1;Parent=LTnewLM_150019200.1 ### LTnewLM_15 . polypeptide 506820 509198 . - . ID=LTnewLM_150019200.1:pep;Derives_from=LTnewLM_150019200.1;orthologous_to=LmjF.15.1210_mRNA,LmjF.36.1150_mRNA;ortholog_cluster=OG0000345;product=term%3DEndonuclease/Exonuclease/phosphatase family/RhoGAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372|Pfam:PF00620;Ontology_term=GO:0007165 LTnewLM_15 Pfam protein_match 506985 507374 . - . Parent=LTnewLM_150019200.1:pep;Name=PF00620;signature_desc=RhoGAP domain;Ontology_term=GO:0007165 LTnewLM_15 Pfam protein_match 508008 508982 . - . Parent=LTnewLM_150019200.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_15 AUGUSTUS gene 510472 511908 1 - . ID=LTnewLM_150019300 LTnewLM_15 AUGUSTUS mRNA 510472 511908 1 - . ID=LTnewLM_150019300.1;Parent=LTnewLM_150019300 LTnewLM_15 AUGUSTUS CDS 510472 511908 1 - 0 ID=LTnewLM_150019300.1:CDS:1;Parent=LTnewLM_150019300.1 ### LTnewLM_15 . polypeptide 510472 511908 . - . ID=LTnewLM_150019300.1:pep;Derives_from=LTnewLM_150019300.1;orthologous_to=LmjF.15.1220_mRNA;ortholog_cluster=OG0001274;product=term%3DDnaJ domain/DnaJ C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556 LTnewLM_15 Pfam protein_match 510706 511515 . - . Parent=LTnewLM_150019300.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_15 Pfam protein_match 511708 511893 . - . Parent=LTnewLM_150019300.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_15 . pseudogene 514544 515937 558 - . ID=LTnewLM_150019400:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.36.1940:mRNA 17 493;original_prot_length=500 LTnewLM_15 . pseudogenic_transcript 514544 515937 . - . ID=LTnewLM_150019400.1;Parent=LTnewLM_150019400:pseudogene LTnewLM_15 . pseudogenic_exon 514544 514738 . - . ID=LTnewLM_150019400.1:pseudogenic_exon:1;Parent=LTnewLM_150019400.1 LTnewLM_15 . pseudogenic_exon 514741 515937 . - . ID=LTnewLM_150019400.1:pseudogenic_exon:2;Parent=LTnewLM_150019400.1 ### LTnewLM_15 . polypeptide 514544 515937 . - . ID=LTnewLM_150019400.1:pep;Derives_from=LTnewLM_150019400.1;orthologous_to=LTnewLM_150019500.1,LTnewLM_150019700.1,LTnewLM_150019800.1,LmjF.15.1230_mRNA,LmjF.15.1240_mRNA;ortholog_cluster=OG0000057;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_15 Pfam protein_match 514552 515544 . - . Parent=LTnewLM_150019400.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 518424 519899 1 - . ID=LTnewLM_150019500 LTnewLM_15 AUGUSTUS mRNA 518424 519899 1 - . ID=LTnewLM_150019500.1;Parent=LTnewLM_150019500 LTnewLM_15 AUGUSTUS CDS 518424 519899 1 - 0 ID=LTnewLM_150019500.1:CDS:1;Parent=LTnewLM_150019500.1 ### LTnewLM_15 . polypeptide 518424 519899 . - . ID=LTnewLM_150019500.1:pep;Derives_from=LTnewLM_150019500.1;orthologous_to=LTnewLM_150019400.1,LTnewLM_150019700.1,LTnewLM_150019800.1,LmjF.15.1230_mRNA,LmjF.15.1240_mRNA;ortholog_cluster=OG0000057;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_15 Pfam protein_match 518454 519452 . - . Parent=LTnewLM_150019500.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 520562 521077 1 - . ID=LTnewLM_150019600 LTnewLM_15 AUGUSTUS mRNA 520562 521077 1 - . ID=LTnewLM_150019600.1;Parent=LTnewLM_150019600 LTnewLM_15 AUGUSTUS CDS 520562 521077 1 - 0 ID=LTnewLM_150019600.1:CDS:1;Parent=LTnewLM_150019600.1 ### LTnewLM_15 . polypeptide 520562 521077 . - . ID=LTnewLM_150019600.1:pep;Derives_from=LTnewLM_150019600.1;orthologous_to=LTnewLM_150019900.1,LmjF.15.1250_mRNA;ortholog_cluster=OG0000346;product=term%3DUbiquitin-fold modifier-conjugating enzyme 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08694 LTnewLM_15 Pfam protein_match 520607 521062 . - . Parent=LTnewLM_150019600.1:pep;Name=PF08694;signature_desc=Ubiquitin-fold modifier-conjugating enzyme 1 ### LTnewLM_15 AUGUSTUS gene 523129 524606 0.85 - . ID=LTnewLM_150019700 LTnewLM_15 AUGUSTUS mRNA 523129 524606 0.85 - . ID=LTnewLM_150019700.1;Parent=LTnewLM_150019700 LTnewLM_15 AUGUSTUS CDS 523129 523411 1 - 1 ID=LTnewLM_150019700.1:CDS:1;Parent=LTnewLM_150019700.1 LTnewLM_15 AUGUSTUS CDS 523456 524606 0.85 - 0 ID=LTnewLM_150019700.1:CDS:2;Parent=LTnewLM_150019700.1 ### LTnewLM_15 . polypeptide 523129 524606 . - . ID=LTnewLM_150019700.1:pep;Derives_from=LTnewLM_150019700.1;orthologous_to=LTnewLM_150019400.1,LTnewLM_150019500.1,LTnewLM_150019800.1,LmjF.15.1230_mRNA,LmjF.15.1240_mRNA;ortholog_cluster=OG0000057;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_15 Pfam protein_match 523203 524159 . - . Parent=LTnewLM_150019700.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 527028 528503 1 - . ID=LTnewLM_150019800 LTnewLM_15 AUGUSTUS mRNA 527028 528503 1 - . ID=LTnewLM_150019800.1;Parent=LTnewLM_150019800 LTnewLM_15 AUGUSTUS CDS 527028 528503 1 - 0 ID=LTnewLM_150019800.1:CDS:1;Parent=LTnewLM_150019800.1 ### LTnewLM_15 . polypeptide 527028 528503 . - . ID=LTnewLM_150019800.1:pep;Derives_from=LTnewLM_150019800.1;orthologous_to=LTnewLM_150019400.1,LTnewLM_150019500.1,LTnewLM_150019700.1,LmjF.15.1230_mRNA,LmjF.15.1240_mRNA;ortholog_cluster=OG0000057;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_15 Pfam protein_match 527058 528056 . - . Parent=LTnewLM_150019800.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 529166 529681 1 - . ID=LTnewLM_150019900 LTnewLM_15 AUGUSTUS mRNA 529166 529681 1 - . ID=LTnewLM_150019900.1;Parent=LTnewLM_150019900 LTnewLM_15 AUGUSTUS CDS 529166 529681 1 - 0 ID=LTnewLM_150019900.1:CDS:1;Parent=LTnewLM_150019900.1 ### LTnewLM_15 . polypeptide 529166 529681 . - . ID=LTnewLM_150019900.1:pep;Derives_from=LTnewLM_150019900.1;orthologous_to=LTnewLM_150019600.1,LmjF.15.1250_mRNA;ortholog_cluster=OG0000346;product=term%3DUbiquitin-fold modifier-conjugating enzyme 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08694 LTnewLM_15 Pfam protein_match 529211 529666 . - . Parent=LTnewLM_150019900.1:pep;Name=PF08694;signature_desc=Ubiquitin-fold modifier-conjugating enzyme 1 ### LTnewLM_15 AUGUSTUS gene 530942 532165 1 - . ID=LTnewLM_150020000 LTnewLM_15 AUGUSTUS mRNA 530942 532165 1 - . ID=LTnewLM_150020000.1;Parent=LTnewLM_150020000 LTnewLM_15 AUGUSTUS CDS 530942 532165 1 - 0 ID=LTnewLM_150020000.1:CDS:1;Parent=LTnewLM_150020000.1 ### LTnewLM_15 . polypeptide 530942 532165 . - . ID=LTnewLM_150020000.1:pep;Derives_from=LTnewLM_150020000.1;orthologous_to=LmjF.15.1260_mRNA;ortholog_cluster=OG0001275;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_15 Pfam protein_match 531245 531463 . - . Parent=LTnewLM_150020000.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_15 AUGUSTUS gene 534140 535777 1 - . ID=LTnewLM_150020100 LTnewLM_15 AUGUSTUS mRNA 534140 535777 1 - . ID=LTnewLM_150020100.1;Parent=LTnewLM_150020100 LTnewLM_15 AUGUSTUS CDS 534140 535777 1 - 0 ID=LTnewLM_150020100.1:CDS:1;Parent=LTnewLM_150020100.1 ### LTnewLM_15 . polypeptide 534140 535777 . - . ID=LTnewLM_150020100.1:pep;Derives_from=LTnewLM_150020100.1;orthologous_to=LmjF.15.1270_mRNA;ortholog_cluster=OG0001276;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 536852 542419 1 - . ID=LTnewLM_150020200 LTnewLM_15 AUGUSTUS mRNA 536852 542419 1 - . ID=LTnewLM_150020200.1;Parent=LTnewLM_150020200 LTnewLM_15 AUGUSTUS CDS 536852 542419 1 - 0 ID=LTnewLM_150020200.1:CDS:1;Parent=LTnewLM_150020200.1 ### LTnewLM_15 . polypeptide 536852 542419 . - . ID=LTnewLM_150020200.1:pep;Derives_from=LTnewLM_150020200.1;orthologous_to=LmjF.15.1280_mRNA;ortholog_cluster=OG0001277;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 544016 547726 1 - . ID=LTnewLM_150020300 LTnewLM_15 AUGUSTUS mRNA 544016 547726 1 - . ID=LTnewLM_150020300.1;Parent=LTnewLM_150020300 LTnewLM_15 AUGUSTUS CDS 544016 547726 1 - 0 ID=LTnewLM_150020300.1:CDS:1;Parent=LTnewLM_150020300.1 ### LTnewLM_15 . polypeptide 544016 547726 . - . ID=LTnewLM_150020300.1:pep;Derives_from=LTnewLM_150020300.1;orthologous_to=LmjF.15.1290_mRNA;ortholog_cluster=OG0001278;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/DNA gyrase B/Toprim domain/C-terminal associated domain of TOPRIM/DNA gyrase/topoisomerase IV%2C subunit A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02518|Pfam:PF00204|Pfam:PF01751|Pfam:PF16898|Pfam:PF00521;Ontology_term=GO:0003918,GO:0005524,GO:0006265,GO:0003677 LTnewLM_15 Pfam protein_match 544424 545680 . - . Parent=LTnewLM_150020300.1:pep;Name=PF00521;signature_desc=DNA gyrase/topoisomerase IV%2C subunit A;Ontology_term=GO:0003677,GO:0003918,GO:0005524,GO:0006265 LTnewLM_15 Pfam protein_match 545696 546076 . - . Parent=LTnewLM_150020300.1:pep;Name=PF16898;signature_desc=C-terminal associated domain of TOPRIM LTnewLM_15 Pfam protein_match 546107 546424 . - . Parent=LTnewLM_150020300.1:pep;Name=PF01751;signature_desc=Toprim domain LTnewLM_15 Pfam protein_match 546590 546877 . - . Parent=LTnewLM_150020300.1:pep;Name=PF00204;signature_desc=DNA gyrase B;Ontology_term=GO:0003677,GO:0003918,GO:0005524,GO:0006265 LTnewLM_15 Pfam protein_match 547271 547570 . - . Parent=LTnewLM_150020300.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_15 AUGUSTUS gene 549637 553875 1 - . ID=LTnewLM_150020400 LTnewLM_15 AUGUSTUS mRNA 549637 553875 1 - . ID=LTnewLM_150020400.1;Parent=LTnewLM_150020400 LTnewLM_15 AUGUSTUS CDS 549637 553875 1 - 0 ID=LTnewLM_150020400.1:CDS:1;Parent=LTnewLM_150020400.1 ### LTnewLM_15 . polypeptide 549637 553875 . - . ID=LTnewLM_150020400.1:pep;Derives_from=LTnewLM_150020400.1;orthologous_to=LmjF.15.1300_mRNA;ortholog_cluster=OG0001279;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_15 Pfam protein_match 552508 553533 . - . Parent=LTnewLM_150020400.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_15 AUGUSTUS gene 556287 558782 1 - . ID=LTnewLM_150020500 LTnewLM_15 AUGUSTUS mRNA 556287 558782 1 - . ID=LTnewLM_150020500.1;Parent=LTnewLM_150020500 LTnewLM_15 AUGUSTUS CDS 556287 558782 1 - 0 ID=LTnewLM_150020500.1:CDS:1;Parent=LTnewLM_150020500.1 ### LTnewLM_15 . polypeptide 556287 558782 . - . ID=LTnewLM_150020500.1:pep;Derives_from=LTnewLM_150020500.1;orthologous_to=LmjF.15.1310_mRNA;ortholog_cluster=OG0001280;product=term%3DCorA-like Mg2+ transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01544;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_15 Pfam protein_match 556305 557084 . - . Parent=LTnewLM_150020500.1:pep;Name=PF01544;signature_desc=CorA-like Mg2+ transporter protein;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_15 AUGUSTUS gene 559749 564116 1 - . ID=LTnewLM_150020600 LTnewLM_15 AUGUSTUS mRNA 559749 564116 1 - . ID=LTnewLM_150020600.1;Parent=LTnewLM_150020600 LTnewLM_15 AUGUSTUS CDS 559749 564116 1 - 0 ID=LTnewLM_150020600.1:CDS:1;Parent=LTnewLM_150020600.1 ### LTnewLM_15 . polypeptide 559749 564116 . - . ID=LTnewLM_150020600.1:pep;Derives_from=LTnewLM_150020600.1;orthologous_to=LmjF.15.1320_mRNA;ortholog_cluster=OG0001281;product=term%3DMIF4G domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02854;Ontology_term=GO:0003723,GO:0005515 LTnewLM_15 Pfam protein_match 561996 562724 . - . Parent=LTnewLM_150020600.1:pep;Name=PF02854;signature_desc=MIF4G domain;Ontology_term=GO:0003723,GO:0005515 ### LTnewLM_15 AUGUSTUS gene 567404 568726 1 - . ID=LTnewLM_150020700 LTnewLM_15 AUGUSTUS mRNA 567404 568726 1 - . ID=LTnewLM_150020700.1;Parent=LTnewLM_150020700 LTnewLM_15 AUGUSTUS CDS 567404 568726 1 - 0 ID=LTnewLM_150020700.1:CDS:1;Parent=LTnewLM_150020700.1 ### LTnewLM_15 . polypeptide 567404 568726 . - . ID=LTnewLM_150020700.1:pep;Derives_from=LTnewLM_150020700.1;orthologous_to=LmjF.15.1330_mRNA;ortholog_cluster=OG0001282;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_15 Pfam protein_match 567410 568657 . - . Parent=LTnewLM_150020700.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_15 AUGUSTUS gene 569390 570505 1 - . ID=LTnewLM_150020800 LTnewLM_15 AUGUSTUS mRNA 569390 570505 1 - . ID=LTnewLM_150020800.1;Parent=LTnewLM_150020800 LTnewLM_15 AUGUSTUS CDS 569390 570505 1 - 0 ID=LTnewLM_150020800.1:CDS:1;Parent=LTnewLM_150020800.1 ### LTnewLM_15 . polypeptide 569390 570505 . - . ID=LTnewLM_150020800.1:pep;Derives_from=LTnewLM_150020800.1;orthologous_to=LmjF.15.1340_mRNA;ortholog_cluster=OG0001283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 571043 572155 1 - . ID=LTnewLM_150020900 LTnewLM_15 AUGUSTUS mRNA 571043 572155 1 - . ID=LTnewLM_150020900.1;Parent=LTnewLM_150020900 LTnewLM_15 AUGUSTUS CDS 571043 572155 1 - 0 ID=LTnewLM_150020900.1:CDS:1;Parent=LTnewLM_150020900.1 ### LTnewLM_15 . polypeptide 571043 572155 . - . ID=LTnewLM_150020900.1:pep;Derives_from=LTnewLM_150020900.1;product=term%3Dhypothetical protein ### LTnewLM_15 AUGUSTUS gene 572784 573695 1 - . ID=LTnewLM_150021000 LTnewLM_15 AUGUSTUS mRNA 572784 573695 1 - . ID=LTnewLM_150021000.1;Parent=LTnewLM_150021000 LTnewLM_15 AUGUSTUS CDS 572784 573695 1 - 0 ID=LTnewLM_150021000.1:CDS:1;Parent=LTnewLM_150021000.1 ### LTnewLM_15 . polypeptide 572784 573695 . - . ID=LTnewLM_150021000.1:pep;Derives_from=LTnewLM_150021000.1;orthologous_to=LmjF.15.1345_mRNA;ortholog_cluster=OG0001284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 574351 576465 1 - . ID=LTnewLM_150021100 LTnewLM_15 AUGUSTUS mRNA 574351 576465 1 - . ID=LTnewLM_150021100.1;Parent=LTnewLM_150021100 LTnewLM_15 AUGUSTUS CDS 574351 576465 1 - 0 ID=LTnewLM_150021100.1:CDS:1;Parent=LTnewLM_150021100.1 ### LTnewLM_15 . polypeptide 574351 576465 . - . ID=LTnewLM_150021100.1:pep;Derives_from=LTnewLM_150021100.1;orthologous_to=LmjF.15.1350_mRNA;ortholog_cluster=OG0001285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 577082 577996 1 - . ID=LTnewLM_150021200 LTnewLM_15 AUGUSTUS mRNA 577082 577996 1 - . ID=LTnewLM_150021200.1;Parent=LTnewLM_150021200 LTnewLM_15 AUGUSTUS CDS 577082 577996 1 - 0 ID=LTnewLM_150021200.1:CDS:1;Parent=LTnewLM_150021200.1 ### LTnewLM_15 . polypeptide 577082 577996 . - . ID=LTnewLM_150021200.1:pep;Derives_from=LTnewLM_150021200.1;orthologous_to=LmjF.15.1355_mRNA;ortholog_cluster=OG0001286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 578400 579617 1 - . ID=LTnewLM_150021300 LTnewLM_15 AUGUSTUS mRNA 578400 579617 1 - . ID=LTnewLM_150021300.1;Parent=LTnewLM_150021300 LTnewLM_15 AUGUSTUS CDS 578400 579617 1 - 0 ID=LTnewLM_150021300.1:CDS:1;Parent=LTnewLM_150021300.1 ### LTnewLM_15 . polypeptide 578400 579617 . - . ID=LTnewLM_150021300.1:pep;Derives_from=LTnewLM_150021300.1;orthologous_to=LmjF.15.1360_mRNA;ortholog_cluster=OG0001287;product=term%3DActin/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_15 Pfam protein_match 578415 579596 . - . Parent=LTnewLM_150021300.1:pep;Name=PF00022;signature_desc=Actin LTnewLM_15 Pfam protein_match 578964 579584 . - . Parent=LTnewLM_150021300.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_15 AUGUSTUS gene 580659 581876 1 - . ID=LTnewLM_150021400 LTnewLM_15 AUGUSTUS mRNA 580659 581876 1 - . ID=LTnewLM_150021400.1;Parent=LTnewLM_150021400 LTnewLM_15 AUGUSTUS CDS 580659 581876 1 - 0 ID=LTnewLM_150021400.1:CDS:1;Parent=LTnewLM_150021400.1 ### LTnewLM_15 . polypeptide 580659 581876 . - . ID=LTnewLM_150021400.1:pep;Derives_from=LTnewLM_150021400.1;orthologous_to=LmjF.15.1370_mRNA;ortholog_cluster=OG0001288;product=term%3DPutative papain-like cysteine peptidase (DUF1796)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08795 LTnewLM_15 Pfam protein_match 581364 581816 . - . Parent=LTnewLM_150021400.1:pep;Name=PF08795;signature_desc=Putative papain-like cysteine peptidase (DUF1796) ### LTnewLM_15 . pseudogene 583299 585182 . - . ID=LTnewLM_150021500:pseudogene;coverage=0.990;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.15.1380_0;has_internal_stop=true LTnewLM_15 . pseudogenic_transcript 583299 585182 . - . ID=LTnewLM_150021500.1;Parent=LTnewLM_150021500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_15 . pseudogenic_exon 583299 585182 . - . ID=LTnewLM_150021500.1:pseudogenic_exon:1;Parent=LTnewLM_150021500.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 583299 585182 . - . ID=LTnewLM_150021500.1:pep;Derives_from=LTnewLM_150021500.1;orthologous_to=LmjF.15.1380_mRNA;ortholog_cluster=OG0007467;product=term%3DsnoRNA binding domain%2C fibrillarin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01798 LTnewLM_15 Pfam protein_match 583509 584189 . - . Parent=LTnewLM_150021500.1:pep;Name=PF01798;signature_desc=snoRNA binding domain%2C fibrillarin ### LTnewLM_15 AUGUSTUS gene 585570 586469 1 - . ID=LTnewLM_150021600 LTnewLM_15 AUGUSTUS mRNA 585570 586469 1 - . ID=LTnewLM_150021600.1;Parent=LTnewLM_150021600 LTnewLM_15 AUGUSTUS CDS 585570 586469 1 - 0 ID=LTnewLM_150021600.1:CDS:1;Parent=LTnewLM_150021600.1 ### LTnewLM_15 . polypeptide 585570 586469 . - . ID=LTnewLM_150021600.1:pep;Derives_from=LTnewLM_150021600.1;orthologous_to=LmjF.15.1390_mRNA;ortholog_cluster=OG0001289;product=term%3DTMEM164 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14808 LTnewLM_15 Pfam protein_match 585744 586112 . - . Parent=LTnewLM_150021600.1:pep;Name=PF14808;signature_desc=TMEM164 family ### LTnewLM_15 AUGUSTUS gene 587055 587942 1 - . ID=LTnewLM_150021700 LTnewLM_15 AUGUSTUS mRNA 587055 587942 1 - . ID=LTnewLM_150021700.1;Parent=LTnewLM_150021700 LTnewLM_15 AUGUSTUS CDS 587055 587942 1 - 0 ID=LTnewLM_150021700.1:CDS:1;Parent=LTnewLM_150021700.1 ### LTnewLM_15 . polypeptide 587055 587942 . - . ID=LTnewLM_150021700.1:pep;Derives_from=LTnewLM_150021700.1;orthologous_to=LmjF.15.1400_mRNA;ortholog_cluster=OG0001290;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 588544 589980 1 - . ID=LTnewLM_150021800 LTnewLM_15 AUGUSTUS mRNA 588544 589980 1 - . ID=LTnewLM_150021800.1;Parent=LTnewLM_150021800 LTnewLM_15 AUGUSTUS CDS 588544 589980 1 - 0 ID=LTnewLM_150021800.1:CDS:1;Parent=LTnewLM_150021800.1 ### LTnewLM_15 . polypeptide 588544 589980 . - . ID=LTnewLM_150021800.1:pep;Derives_from=LTnewLM_150021800.1;orthologous_to=LmjF.15.1410_mRNA;ortholog_cluster=OG0001291;product=term%3DZinc finger%2C C3HC4 type (RING finger)/RING-like zinc finger/RING-type zinc-finger/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13923|Pfam:PF17123|Pfam:PF13445|Pfam:PF13639;Ontology_term=GO:0008270,GO:0005515 LTnewLM_15 Pfam protein_match 588994 589116 . - . Parent=LTnewLM_150021800.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_15 Pfam protein_match 588997 589119 . - . Parent=LTnewLM_150021800.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_15 Pfam protein_match 589003 589116 . - . Parent=LTnewLM_150021800.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_15 Pfam protein_match 589036 589116 . - . Parent=LTnewLM_150021800.1:pep;Name=PF17123;signature_desc=RING-like zinc finger ### LTnewLM_15 AUGUSTUS gene 590914 593940 1 - . ID=LTnewLM_150021900 LTnewLM_15 AUGUSTUS mRNA 590914 593940 1 - . ID=LTnewLM_150021900.1;Parent=LTnewLM_150021900 LTnewLM_15 AUGUSTUS CDS 590914 593940 1 - 0 ID=LTnewLM_150021900.1:CDS:1;Parent=LTnewLM_150021900.1 ### LTnewLM_15 . polypeptide 590914 593940 . - . ID=LTnewLM_150021900.1:pep;Derives_from=LTnewLM_150021900.1;orthologous_to=LmjF.15.1420_mRNA;ortholog_cluster=OG0001292;product=term%3DMutS domain I/MutS domain III/MutS domain V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01624|Pfam:PF05192|Pfam:PF00488;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_15 Pfam protein_match 590983 591618 . - . Parent=LTnewLM_150021900.1:pep;Name=PF00488;signature_desc=MutS domain V;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_15 Pfam protein_match 591811 592725 . - . Parent=LTnewLM_150021900.1:pep;Name=PF05192;signature_desc=MutS domain III;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_15 Pfam protein_match 593503 593835 . - . Parent=LTnewLM_150021900.1:pep;Name=PF01624;signature_desc=MutS domain I;Ontology_term=GO:0005524,GO:0030983,GO:0006298 ### LTnewLM_15 AUGUSTUS gene 595978 596265 1 - . ID=LTnewLM_150022000 LTnewLM_15 AUGUSTUS mRNA 595978 596265 1 - . ID=LTnewLM_150022000.1;Parent=LTnewLM_150022000 LTnewLM_15 AUGUSTUS CDS 595978 596265 1 - 0 ID=LTnewLM_150022000.1:CDS:1;Parent=LTnewLM_150022000.1 ### LTnewLM_15 . polypeptide 595978 596265 . - . ID=LTnewLM_150022000.1:pep;Derives_from=LTnewLM_150022000.1;orthologous_to=LmjF.15.1430_mRNA;ortholog_cluster=OG0001293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 597545 599257 1 - . ID=LTnewLM_150022100 LTnewLM_15 AUGUSTUS mRNA 597545 599257 1 - . ID=LTnewLM_150022100.1;Parent=LTnewLM_150022100 LTnewLM_15 AUGUSTUS CDS 597545 599257 1 - 0 ID=LTnewLM_150022100.1:CDS:1;Parent=LTnewLM_150022100.1 ### LTnewLM_15 . polypeptide 597545 599257 . - . ID=LTnewLM_150022100.1:pep;Derives_from=LTnewLM_150022100.1;orthologous_to=LmjF.15.1440_mRNA;ortholog_cluster=OG0001294;product=term%3DtRNA synthetases class I (E and Q)%2C catalytic domain/tRNA synthetases class I (E and Q)%2C anti-codon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00749|Pfam:PF03950;Ontology_term=GO:0000166,GO:0005737,GO:0016876,GO:0005524,GO:0043039,GO:0004812,GO:0006418 LTnewLM_15 Pfam protein_match 597653 598195 . - . Parent=LTnewLM_150022100.1:pep;Name=PF03950;signature_desc=tRNA synthetases class I (E and Q)%2C anti-codon binding domain;Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418,GO:0005737 LTnewLM_15 Pfam protein_match 598208 599107 . - . Parent=LTnewLM_150022100.1:pep;Name=PF00749;signature_desc=tRNA synthetases class I (E and Q)%2C catalytic domain;Ontology_term=GO:0005524,GO:0016876,GO:0043039 ### LTnewLM_15 AUGUSTUS gene 600878 601759 1 - . ID=LTnewLM_150022200 LTnewLM_15 AUGUSTUS mRNA 600878 601759 1 - . ID=LTnewLM_150022200.1;Parent=LTnewLM_150022200 LTnewLM_15 AUGUSTUS CDS 600878 601759 1 - 0 ID=LTnewLM_150022200.1:CDS:1;Parent=LTnewLM_150022200.1 ### LTnewLM_15 . polypeptide 600878 601759 . - . ID=LTnewLM_150022200.1:pep;Derives_from=LTnewLM_150022200.1;orthologous_to=LmjF.15.1450_mRNA;ortholog_cluster=OG0001295;product=term%3DProliferating cell nuclear antigen%2C N-terminal domain/Rad9/Proliferating cell nuclear antigen%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00705|Pfam:PF04139|Pfam:PF02747;Ontology_term=GO:0006275,GO:0030896,GO:0000077,GO:0003677 LTnewLM_15 Pfam protein_match 600899 601075 . - . Parent=LTnewLM_150022200.1:pep;Name=PF02747;signature_desc=Proliferating cell nuclear antigen%2C C-terminal domain;Ontology_term=GO:0003677,GO:0006275 LTnewLM_15 Pfam protein_match 601184 601381 . - . Parent=LTnewLM_150022200.1:pep;Name=PF02747;signature_desc=Proliferating cell nuclear antigen%2C C-terminal domain;Ontology_term=GO:0003677,GO:0006275 LTnewLM_15 Pfam protein_match 601226 601720 . - . Parent=LTnewLM_150022200.1:pep;Name=PF04139;signature_desc=Rad9;Ontology_term=GO:0000077,GO:0030896 LTnewLM_15 Pfam protein_match 601391 601759 . - . Parent=LTnewLM_150022200.1:pep;Name=PF00705;signature_desc=Proliferating cell nuclear antigen%2C N-terminal domain;Ontology_term=GO:0003677,GO:0006275 ### LTnewLM_15 AUGUSTUS gene 602556 603932 1 - . ID=LTnewLM_150022300 LTnewLM_15 AUGUSTUS mRNA 602556 603932 1 - . ID=LTnewLM_150022300.1;Parent=LTnewLM_150022300 LTnewLM_15 AUGUSTUS CDS 602556 603932 1 - 0 ID=LTnewLM_150022300.1:CDS:1;Parent=LTnewLM_150022300.1 ### LTnewLM_15 . polypeptide 602556 603932 . - . ID=LTnewLM_150022300.1:pep;Derives_from=LTnewLM_150022300.1;orthologous_to=LmjF.15.1460_mRNA;ortholog_cluster=OG0001296;product=term%3DGHMP kinases N terminal domain/GHMP kinases C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00288|Pfam:PF08544;Ontology_term=GO:0005524 LTnewLM_15 Pfam protein_match 602658 602846 . - . Parent=LTnewLM_150022300.1:pep;Name=PF08544;signature_desc=GHMP kinases C terminal LTnewLM_15 Pfam protein_match 603288 603461 . - . Parent=LTnewLM_150022300.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 ### LTnewLM_15 AUGUSTUS gene 605106 605483 1 - . ID=LTnewLM_150022400 LTnewLM_15 AUGUSTUS mRNA 605106 605483 1 - . ID=LTnewLM_150022400.1;Parent=LTnewLM_150022400 LTnewLM_15 AUGUSTUS CDS 605106 605483 1 - 0 ID=LTnewLM_150022400.1:CDS:1;Parent=LTnewLM_150022400.1 ### LTnewLM_15 . polypeptide 605106 605483 . - . ID=LTnewLM_150022400.1:pep;Derives_from=LTnewLM_150022400.1;orthologous_to=LmjF.15.1465_mRNA;ortholog_cluster=OG0001297;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 606929 607309 1 - . ID=LTnewLM_150022500 LTnewLM_15 AUGUSTUS mRNA 606929 607309 1 - . ID=LTnewLM_150022500.1;Parent=LTnewLM_150022500 LTnewLM_15 AUGUSTUS CDS 606929 607309 1 - 0 ID=LTnewLM_150022500.1:CDS:1;Parent=LTnewLM_150022500.1 ### LTnewLM_15 . polypeptide 606929 607309 . - . ID=LTnewLM_150022500.1:pep;Derives_from=LTnewLM_150022500.1;orthologous_to=LmjF.15.1470_mRNA;ortholog_cluster=OG0001298;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_15 Pfam protein_match 606980 607249 . - . Parent=LTnewLM_150022500.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_15 AUGUSTUS gene 609953 612745 1 - . ID=LTnewLM_150022600 LTnewLM_15 AUGUSTUS mRNA 609953 612745 1 - . ID=LTnewLM_150022600.1;Parent=LTnewLM_150022600 LTnewLM_15 AUGUSTUS CDS 609953 612745 1 - 0 ID=LTnewLM_150022600.1:CDS:1;Parent=LTnewLM_150022600.1 ### LTnewLM_15 . polypeptide 609953 612745 . - . ID=LTnewLM_150022600.1:pep;Derives_from=LTnewLM_150022600.1;orthologous_to=LTnewLM_150022700.1,LmjF.15.1480_mRNA,LmjF.17.0950_mRNA;ortholog_cluster=OG0000127;product=term%3DGAF domain/3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01590|Pfam:PF00233;Ontology_term=GO:0005515,GO:0007165,GO:0004114 LTnewLM_15 Pfam protein_match 610031 610738 . - . Parent=LTnewLM_150022600.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 LTnewLM_15 Pfam protein_match 611099 611512 . - . Parent=LTnewLM_150022600.1:pep;Name=PF01590;signature_desc=GAF domain;Ontology_term=GO:0005515 LTnewLM_15 Pfam protein_match 611615 612025 . - . Parent=LTnewLM_150022600.1:pep;Name=PF01590;signature_desc=GAF domain;Ontology_term=GO:0005515 ### LTnewLM_15 AUGUSTUS gene 615579 618401 1 - . ID=LTnewLM_150022700 LTnewLM_15 AUGUSTUS mRNA 615579 618401 1 - . ID=LTnewLM_150022700.1;Parent=LTnewLM_150022700 LTnewLM_15 AUGUSTUS CDS 615579 618401 1 - 0 ID=LTnewLM_150022700.1:CDS:1;Parent=LTnewLM_150022700.1 ### LTnewLM_15 . polypeptide 615579 618401 . - . ID=LTnewLM_150022700.1:pep;Derives_from=LTnewLM_150022700.1;orthologous_to=LTnewLM_150022600.1,LmjF.15.1480_mRNA,LmjF.17.0950_mRNA;ortholog_cluster=OG0000127;product=term%3DGAF domain/3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01590|Pfam:PF00233;Ontology_term=GO:0005515,GO:0007165,GO:0004114 LTnewLM_15 Pfam protein_match 615657 616364 . - . Parent=LTnewLM_150022700.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 LTnewLM_15 Pfam protein_match 616725 617138 . - . Parent=LTnewLM_150022700.1:pep;Name=PF01590;signature_desc=GAF domain;Ontology_term=GO:0005515 LTnewLM_15 Pfam protein_match 617241 617651 . - . Parent=LTnewLM_150022700.1:pep;Name=PF01590;signature_desc=GAF domain;Ontology_term=GO:0005515 ### LTnewLM_15 AUGUSTUS gene 619683 621683 1 - . ID=LTnewLM_150022800 LTnewLM_15 AUGUSTUS mRNA 619683 621683 1 - . ID=LTnewLM_150022800.1;Parent=LTnewLM_150022800 LTnewLM_15 AUGUSTUS CDS 619683 621683 1 - 0 ID=LTnewLM_150022800.1:CDS:1;Parent=LTnewLM_150022800.1 ### LTnewLM_15 . polypeptide 619683 621683 . - . ID=LTnewLM_150022800.1:pep;Derives_from=LTnewLM_150022800.1;orthologous_to=LmjF.15.1490_mRNA;ortholog_cluster=OG0001299;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 622435 623313 1 - . ID=LTnewLM_150022900 LTnewLM_15 AUGUSTUS mRNA 622435 623313 1 - . ID=LTnewLM_150022900.1;Parent=LTnewLM_150022900 LTnewLM_15 AUGUSTUS CDS 622435 623313 1 - 0 ID=LTnewLM_150022900.1:CDS:1;Parent=LTnewLM_150022900.1 ### LTnewLM_15 . polypeptide 622435 623313 . - . ID=LTnewLM_150022900.1:pep;Derives_from=LTnewLM_150022900.1;orthologous_to=LmjF.15.1500_mRNA;ortholog_cluster=OG0001300;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 624058 624654 1 - . ID=LTnewLM_150023000 LTnewLM_15 AUGUSTUS mRNA 624058 624654 1 - . ID=LTnewLM_150023000.1;Parent=LTnewLM_150023000 LTnewLM_15 AUGUSTUS CDS 624058 624654 1 - 0 ID=LTnewLM_150023000.1:CDS:1;Parent=LTnewLM_150023000.1 ### LTnewLM_15 . polypeptide 624058 624654 . - . ID=LTnewLM_150023000.1:pep;Derives_from=LTnewLM_150023000.1;orthologous_to=LmjF.15.1510_mRNA;ortholog_cluster=OG0001301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 Liftoff gene 625696 625857 . - . ID=LTnewLM_150023100;coverage=1.0;sequence_ID=0.913;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.15.1520_0 LTnewLM_15 Liftoff mRNA 625696 625857 . - . ID=LTnewLM_150023100.1;Parent=LTnewLM_150023100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_15 Liftoff CDS 625696 625857 . - 0 ID=LTnewLM_150023100.1:CDS:1;Parent=LTnewLM_150023100.1;extra_copy_number=0 ### LTnewLM_15 . polypeptide 625696 625857 . - . ID=LTnewLM_150023100.1:pep;Derives_from=LTnewLM_150023100.1;orthologous_to=LmjF.15.1520_mRNA;ortholog_cluster=OG0001302;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 626481 627539 1 - . ID=LTnewLM_150023200 LTnewLM_15 AUGUSTUS mRNA 626481 627539 1 - . ID=LTnewLM_150023200.1;Parent=LTnewLM_150023200 LTnewLM_15 AUGUSTUS CDS 626481 627539 1 - 0 ID=LTnewLM_150023200.1:CDS:1;Parent=LTnewLM_150023200.1 ### LTnewLM_15 . polypeptide 626481 627539 . - . ID=LTnewLM_150023200.1:pep;Derives_from=LTnewLM_150023200.1;orthologous_to=LmjF.15.1530_mRNA;ortholog_cluster=OG0001303;product=term%3DPresenilin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01080;Ontology_term=GO:0004190,GO:0016021 LTnewLM_15 Pfam protein_match 626523 626762 . - . Parent=LTnewLM_150023200.1:pep;Name=PF01080;signature_desc=Presenilin;Ontology_term=GO:0004190,GO:0016021 LTnewLM_15 Pfam protein_match 626829 627482 . - . Parent=LTnewLM_150023200.1:pep;Name=PF01080;signature_desc=Presenilin;Ontology_term=GO:0004190,GO:0016021 ### LTnewLM_15 AUGUSTUS gene 628173 629423 1 - . ID=LTnewLM_150023300 LTnewLM_15 AUGUSTUS mRNA 628173 629423 1 - . ID=LTnewLM_150023300.1;Parent=LTnewLM_150023300 LTnewLM_15 AUGUSTUS CDS 628173 629423 1 - 0 ID=LTnewLM_150023300.1:CDS:1;Parent=LTnewLM_150023300.1 ### LTnewLM_15 . polypeptide 628173 629423 . - . ID=LTnewLM_150023300.1:pep;Derives_from=LTnewLM_150023300.1;orthologous_to=LmjF.15.1540_mRNA;ortholog_cluster=OG0001304;product=term%3DRadical SAM superfamily/Wyosine base formation%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04055|Pfam:PF08608;Ontology_term=GO:0003824,GO:0051536 LTnewLM_15 Pfam protein_match 628470 628670 . - . Parent=LTnewLM_150023300.1:pep;Name=PF08608;signature_desc=Wyosine base formation LTnewLM_15 Pfam protein_match 628707 629222 . - . Parent=LTnewLM_150023300.1:pep;Name=PF04055;signature_desc=Radical SAM superfamily;Ontology_term=GO:0003824,GO:0051536 ### LTnewLM_15 AUGUSTUS gene 630081 630749 1 - . ID=LTnewLM_150023400 LTnewLM_15 AUGUSTUS mRNA 630081 630749 1 - . ID=LTnewLM_150023400.1;Parent=LTnewLM_150023400 LTnewLM_15 AUGUSTUS CDS 630081 630749 1 - 0 ID=LTnewLM_150023400.1:CDS:1;Parent=LTnewLM_150023400.1 ### LTnewLM_15 . polypeptide 630081 630749 . - . ID=LTnewLM_150023400.1:pep;Derives_from=LTnewLM_150023400.1;orthologous_to=LmjF.15.1545_mRNA;ortholog_cluster=OG0001305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_15 AUGUSTUS gene 631325 632485 1 - . ID=LTnewLM_150023500 LTnewLM_15 AUGUSTUS mRNA 631325 632485 1 - . ID=LTnewLM_150023500.1;Parent=LTnewLM_150023500 LTnewLM_15 AUGUSTUS CDS 631325 632485 1 - 0 ID=LTnewLM_150023500.1:CDS:1;Parent=LTnewLM_150023500.1 ### LTnewLM_15 . polypeptide 631325 632485 . - . ID=LTnewLM_150023500.1:pep;Derives_from=LTnewLM_150023500.1;orthologous_to=LmjF.15.1550_mRNA;ortholog_cluster=OG0001306;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/FYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF01363;Ontology_term=GO:0004672,GO:0005524,GO:0046872,GO:0006468 LTnewLM_15 Pfam protein_match 631349 631537 . - . Parent=LTnewLM_150023500.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_15 Pfam protein_match 631604 632452 . - . Parent=LTnewLM_150023500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_15 Pfam protein_match 631616 632455 . - . Parent=LTnewLM_150023500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_15 AUGUSTUS gene 633364 637134 1 - . ID=LTnewLM_150023600 LTnewLM_15 AUGUSTUS mRNA 633364 637134 1 - . ID=LTnewLM_150023600.1;Parent=LTnewLM_150023600 LTnewLM_15 AUGUSTUS CDS 633364 637134 1 - 0 ID=LTnewLM_150023600.1:CDS:1;Parent=LTnewLM_150023600.1 ### LTnewLM_15 . polypeptide 633364 637134 . - . ID=LTnewLM_150023600.1:pep;Derives_from=LTnewLM_150023600.1;orthologous_to=LmjF.15.1560_mRNA;ortholog_cluster=OG0001307;product=term%3Dnon-SMC mitotic condensation complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12717 LTnewLM_15 Pfam protein_match 633640 634137 . - . Parent=LTnewLM_150023600.1:pep;Name=PF12717;signature_desc=non-SMC mitotic condensation complex subunit 1 ### LTnewLM_15 AUGUSTUS gene 641590 643221 1 + . ID=LTnewLM_150023700 LTnewLM_15 AUGUSTUS mRNA 641590 643221 1 + . ID=LTnewLM_150023700.1;Parent=LTnewLM_150023700 LTnewLM_15 AUGUSTUS CDS 641590 643221 1 + 0 ID=LTnewLM_150023700.1:CDS:1;Parent=LTnewLM_150023700.1 ### LTnewLM_15 . polypeptide 641590 643221 . + . ID=LTnewLM_150023700.1:pep;Derives_from=LTnewLM_150023700.1;orthologous_to=LmjF.15.1570_mRNA;ortholog_cluster=OG0001308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 1 2003 0.88 + . ID=LTnewLM_160005000;fiveEndPartial=true;Start_range=.,. LTnewLM_16 AUGUSTUS mRNA 1 2003 0.88 + . ID=LTnewLM_160005000.1;Parent=LTnewLM_160005000 LTnewLM_16 AUGUSTUS CDS 1372 2003 0.88 + 2 ID=LTnewLM_160005000.1:CDS:1;Parent=LTnewLM_160005000.1 ### LTnewLM_16 . contig 1 698018 . + . Name=LTnewLM_CTG000015 LTnewLM_16 . polypeptide 1372 2003 . + . ID=LTnewLM_160005000.1:pep;Derives_from=LTnewLM_160005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . pseudogene 3465 4146 . - . ID=LTnewLM_160005100:pseudogene;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.0005_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 3465 4146 . - . ID=LTnewLM_160005100.1;Parent=LTnewLM_160005100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 3465 4146 . - . ID=LTnewLM_160005100.1:pseudogenic_exon:1;Parent=LTnewLM_160005100.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 3465 4146 . - . ID=LTnewLM_160005100.1:pep;Derives_from=LTnewLM_160005100.1;product=term%3Dhypothetical protein ### LTnewLM_16 AUGUSTUS gene 4481 5605 1 - . ID=LTnewLM_160005200 LTnewLM_16 AUGUSTUS mRNA 4481 5605 1 - . ID=LTnewLM_160005200.1;Parent=LTnewLM_160005200 LTnewLM_16 AUGUSTUS CDS 4481 5605 1 - 0 ID=LTnewLM_160005200.1:CDS:1;Parent=LTnewLM_160005200.1 ### LTnewLM_16 . polypeptide 4481 5605 . - . ID=LTnewLM_160005200.1:pep;Derives_from=LTnewLM_160005200.1;orthologous_to=LmjF.16.0010_mRNA;ortholog_cluster=OG0001309;product=term%3DRibosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00828 LTnewLM_16 Pfam protein_match 4853 5212 . - . Parent=LTnewLM_160005200.1:pep;Name=PF00828;signature_desc=Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A ### LTnewLM_16 AUGUSTUS gene 6141 6785 1 - . ID=LTnewLM_160005300 LTnewLM_16 AUGUSTUS mRNA 6141 6785 1 - . ID=LTnewLM_160005300.1;Parent=LTnewLM_160005300 LTnewLM_16 AUGUSTUS CDS 6141 6785 1 - 0 ID=LTnewLM_160005300.1:CDS:1;Parent=LTnewLM_160005300.1 ### LTnewLM_16 . polypeptide 6141 6785 . - . ID=LTnewLM_160005300.1:pep;Derives_from=LTnewLM_160005300.1;orthologous_to=LmjF.16.0020_mRNA;ortholog_cluster=OG0001310;product=term%3DAAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13207 LTnewLM_16 Pfam protein_match 6543 6617 . - . Parent=LTnewLM_160005300.1:pep;Name=PF13207;signature_desc=AAA domain ### LTnewLM_16 AUGUSTUS gene 7277 8374 1 - . ID=LTnewLM_160005400 LTnewLM_16 AUGUSTUS mRNA 7277 8374 1 - . ID=LTnewLM_160005400.1;Parent=LTnewLM_160005400 LTnewLM_16 AUGUSTUS CDS 7277 8374 1 - 0 ID=LTnewLM_160005400.1:CDS:1;Parent=LTnewLM_160005400.1 ### LTnewLM_16 . polypeptide 7277 8374 . - . ID=LTnewLM_160005400.1:pep;Derives_from=LTnewLM_160005400.1;orthologous_to=LmjF.16.0030_mRNA;ortholog_cluster=OG0001311;product=term%3DRibosomal protein L11 methyltransferase (PrmA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06325;Ontology_term=GO:0006479,GO:0005737,GO:0008276 LTnewLM_16 Pfam protein_match 8072 8239 . - . Parent=LTnewLM_160005400.1:pep;Name=PF06325;signature_desc=Ribosomal protein L11 methyltransferase (PrmA);Ontology_term=GO:0008276,GO:0006479,GO:0005737 ### LTnewLM_16 AUGUSTUS gene 9055 10008 1 - . ID=LTnewLM_160005500 LTnewLM_16 AUGUSTUS mRNA 9055 10008 1 - . ID=LTnewLM_160005500.1;Parent=LTnewLM_160005500 LTnewLM_16 AUGUSTUS CDS 9055 10008 1 - 0 ID=LTnewLM_160005500.1:CDS:1;Parent=LTnewLM_160005500.1 ### LTnewLM_16 . polypeptide 9055 10008 . - . ID=LTnewLM_160005500.1:pep;Derives_from=LTnewLM_160005500.1;orthologous_to=LmjF.16.0040_mRNA;ortholog_cluster=OG0001312;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13640;Ontology_term=GO:0016706,GO:0016491,GO:0055114 LTnewLM_16 Pfam protein_match 9244 9546 . - . Parent=LTnewLM_160005500.1:pep;Name=PF13640;signature_desc=2OG-Fe(II) oxygenase superfamily;Ontology_term=GO:0016491,GO:0016706,GO:0055114 ### LTnewLM_16 AUGUSTUS gene 10563 12536 1 - . ID=LTnewLM_160005600 LTnewLM_16 AUGUSTUS mRNA 10563 12536 1 - . ID=LTnewLM_160005600.1;Parent=LTnewLM_160005600 LTnewLM_16 AUGUSTUS CDS 10563 12536 1 - 0 ID=LTnewLM_160005600.1:CDS:1;Parent=LTnewLM_160005600.1 ### LTnewLM_16 . polypeptide 10563 12536 . - . ID=LTnewLM_160005600.1:pep;Derives_from=LTnewLM_160005600.1;orthologous_to=LmjF.16.0050_mRNA;ortholog_cluster=OG0001313;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_16 Pfam protein_match 10965 11273 . - . Parent=LTnewLM_160005600.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_16 Pfam protein_match 11967 12371 . - . Parent=LTnewLM_160005600.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_16 AUGUSTUS gene 13499 16378 1 - . ID=LTnewLM_160005700 LTnewLM_16 AUGUSTUS mRNA 13499 16378 1 - . ID=LTnewLM_160005700.1;Parent=LTnewLM_160005700 LTnewLM_16 AUGUSTUS CDS 13499 16378 1 - 0 ID=LTnewLM_160005700.1:CDS:1;Parent=LTnewLM_160005700.1 ### LTnewLM_16 . polypeptide 13499 16378 . - . ID=LTnewLM_160005700.1:pep;Derives_from=LTnewLM_160005700.1;orthologous_to=LmjF.16.0060_mRNA;ortholog_cluster=OG0001314;product=term%3DATPase family associated with various cellular activities (AAA)/Vps4 C terminal oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF09336;Ontology_term=GO:0005524 LTnewLM_16 Pfam protein_match 13532 13627 . - . Parent=LTnewLM_160005700.1:pep;Name=PF09336;signature_desc=Vps4 C terminal oligomerisation domain LTnewLM_16 Pfam protein_match 13919 14329 . - . Parent=LTnewLM_160005700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_16 AUGUSTUS gene 16920 18119 1 - . ID=LTnewLM_160005800 LTnewLM_16 AUGUSTUS mRNA 16920 18119 1 - . ID=LTnewLM_160005800.1;Parent=LTnewLM_160005800 LTnewLM_16 AUGUSTUS CDS 16920 18119 1 - 0 ID=LTnewLM_160005800.1:CDS:1;Parent=LTnewLM_160005800.1 ### LTnewLM_16 . polypeptide 16920 18119 . - . ID=LTnewLM_160005800.1:pep;Derives_from=LTnewLM_160005800.1;orthologous_to=LmjF.16.0070_mRNA;ortholog_cluster=OG0001315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 19493 21709 1 - . ID=LTnewLM_160005900 LTnewLM_16 AUGUSTUS mRNA 19493 21709 1 - . ID=LTnewLM_160005900.1;Parent=LTnewLM_160005900 LTnewLM_16 AUGUSTUS CDS 19493 21709 1 - 0 ID=LTnewLM_160005900.1:CDS:1;Parent=LTnewLM_160005900.1 ### LTnewLM_16 . polypeptide 19493 21709 . - . ID=LTnewLM_160005900.1:pep;Derives_from=LTnewLM_160005900.1;orthologous_to=LmjF.16.0080_mRNA;ortholog_cluster=OG0001316;product=term%3DGalactose oxidase%2C central domain/Kelch motif/Domain of unknown function (DUF4110)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13418|Pfam:PF01344|Pfam:PF13422;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 19577 19843 . - . Parent=LTnewLM_160005900.1:pep;Name=PF13422;signature_desc=Domain of unknown function (DUF4110) LTnewLM_16 Pfam protein_match 21161 21310 . - . Parent=LTnewLM_160005900.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 21329 21478 . - . Parent=LTnewLM_160005900.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain ### LTnewLM_16 AUGUSTUS gene 23626 23910 1 - . ID=LTnewLM_160006000 LTnewLM_16 AUGUSTUS mRNA 23626 23910 1 - . ID=LTnewLM_160006000.1;Parent=LTnewLM_160006000 LTnewLM_16 AUGUSTUS CDS 23626 23910 1 - 0 ID=LTnewLM_160006000.1:CDS:1;Parent=LTnewLM_160006000.1 ### LTnewLM_16 . polypeptide 23626 23910 . - . ID=LTnewLM_160006000.1:pep;Derives_from=LTnewLM_160006000.1;product=term%3Dhypothetical protein ### LTnewLM_16 AUGUSTUS gene 24751 25734 1 - . ID=LTnewLM_160006100 LTnewLM_16 AUGUSTUS mRNA 24751 25734 1 - . ID=LTnewLM_160006100.1;Parent=LTnewLM_160006100 LTnewLM_16 AUGUSTUS CDS 24751 25734 1 - 0 ID=LTnewLM_160006100.1:CDS:1;Parent=LTnewLM_160006100.1 ### LTnewLM_16 . polypeptide 24751 25734 . - . ID=LTnewLM_160006100.1:pep;Derives_from=LTnewLM_160006100.1;orthologous_to=LmjF.16.0090_mRNA;ortholog_cluster=OG0001317;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_16 Pfam protein_match 25123 25350 . - . Parent=LTnewLM_160006100.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_16 AUGUSTUS gene 26773 28869 1 - . ID=LTnewLM_160006200 LTnewLM_16 AUGUSTUS mRNA 26773 28869 1 - . ID=LTnewLM_160006200.1;Parent=LTnewLM_160006200 LTnewLM_16 AUGUSTUS CDS 26773 28869 1 - 0 ID=LTnewLM_160006200.1:CDS:1;Parent=LTnewLM_160006200.1 ### LTnewLM_16 . polypeptide 26773 28869 . - . ID=LTnewLM_160006200.1:pep;Derives_from=LTnewLM_160006200.1;orthologous_to=LmjF.16.0100_mRNA;ortholog_cluster=OG0001318;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_16 Pfam protein_match 28606 28665 . - . Parent=LTnewLM_160006200.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_16 Pfam protein_match 28672 28734 . - . Parent=LTnewLM_160006200.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_16 AUGUSTUS gene 30989 33469 1 - . ID=LTnewLM_160006300 LTnewLM_16 AUGUSTUS mRNA 30989 33469 1 - . ID=LTnewLM_160006300.1;Parent=LTnewLM_160006300 LTnewLM_16 AUGUSTUS CDS 30989 33469 1 - 0 ID=LTnewLM_160006300.1:CDS:1;Parent=LTnewLM_160006300.1 ### LTnewLM_16 . polypeptide 30989 33469 . - . ID=LTnewLM_160006300.1:pep;Derives_from=LTnewLM_160006300.1;orthologous_to=LmjF.16.0110_mRNA;ortholog_cluster=OG0001319;product=term%3DPhosphotransferase enzyme family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01636 LTnewLM_16 Pfam protein_match 31301 32086 . - . Parent=LTnewLM_160006300.1:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family ### LTnewLM_16 AUGUSTUS gene 34283 36643 1 - . ID=LTnewLM_160006400 LTnewLM_16 AUGUSTUS mRNA 34283 36643 1 - . ID=LTnewLM_160006400.1;Parent=LTnewLM_160006400 LTnewLM_16 AUGUSTUS CDS 34283 36643 1 - 0 ID=LTnewLM_160006400.1:CDS:1;Parent=LTnewLM_160006400.1 ### LTnewLM_16 . polypeptide 34283 36643 . - . ID=LTnewLM_160006400.1:pep;Derives_from=LTnewLM_160006400.1;orthologous_to=LmjF.16.0120_mRNA;ortholog_cluster=OG0001320;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 37488 38114 1 - . ID=LTnewLM_160006500 LTnewLM_16 AUGUSTUS mRNA 37488 38114 1 - . ID=LTnewLM_160006500.1;Parent=LTnewLM_160006500 LTnewLM_16 AUGUSTUS CDS 37488 38114 1 - 0 ID=LTnewLM_160006500.1:CDS:1;Parent=LTnewLM_160006500.1 ### LTnewLM_16 . polypeptide 37488 38114 . - . ID=LTnewLM_160006500.1:pep;Derives_from=LTnewLM_160006500.1;orthologous_to=LmjF.16.0130_mRNA;ortholog_cluster=OG0001321;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 38893 39244 0.49 - . ID=LTnewLM_160006600 LTnewLM_16 AUGUSTUS mRNA 38893 39244 0.49 - . ID=LTnewLM_160006600.1;Parent=LTnewLM_160006600 LTnewLM_16 AUGUSTUS CDS 38893 38919 0.53 - 0 ID=LTnewLM_160006600.1:CDS:1;Parent=LTnewLM_160006600.1 LTnewLM_16 AUGUSTUS CDS 38981 39244 0.49 - 0 ID=LTnewLM_160006600.1:CDS:2;Parent=LTnewLM_160006600.1 ### LTnewLM_16 . polypeptide 38893 39244 . - . ID=LTnewLM_160006600.1:pep;Derives_from=LTnewLM_160006600.1;product=term%3Dhypothetical protein ### LTnewLM_16 AUGUSTUS gene 41177 41683 1 - . ID=LTnewLM_160006700 LTnewLM_16 AUGUSTUS mRNA 41177 41683 1 - . ID=LTnewLM_160006700.1;Parent=LTnewLM_160006700 LTnewLM_16 AUGUSTUS CDS 41177 41683 1 - 0 ID=LTnewLM_160006700.1:CDS:1;Parent=LTnewLM_160006700.1 ### LTnewLM_16 . polypeptide 41177 41683 . - . ID=LTnewLM_160006700.1:pep;Derives_from=LTnewLM_160006700.1;orthologous_to=LmjF.16.0140_mRNA;ortholog_cluster=OG0001322;product=term%3DTranslation initiation factor 1A / IF-1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01176;Ontology_term=GO:0003723,GO:0006413,GO:0003743 LTnewLM_16 Pfam protein_match 41390 41578 . - . Parent=LTnewLM_160006700.1:pep;Name=PF01176;signature_desc=Translation initiation factor 1A / IF-1;Ontology_term=GO:0003723,GO:0003743,GO:0006413 ### LTnewLM_16 AUGUSTUS gene 43114 43821 1 - . ID=LTnewLM_160006800 LTnewLM_16 AUGUSTUS mRNA 43114 43821 1 - . ID=LTnewLM_160006800.1;Parent=LTnewLM_160006800 LTnewLM_16 AUGUSTUS CDS 43114 43821 1 - 0 ID=LTnewLM_160006800.1:CDS:1;Parent=LTnewLM_160006800.1 ### LTnewLM_16 . polypeptide 43114 43821 . - . ID=LTnewLM_160006800.1:pep;Derives_from=LTnewLM_160006800.1;orthologous_to=LmjF.16.0150_mRNA;ortholog_cluster=OG0001323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 44855 45772 1 - . ID=LTnewLM_160006900 LTnewLM_16 AUGUSTUS mRNA 44855 45772 1 - . ID=LTnewLM_160006900.1;Parent=LTnewLM_160006900 LTnewLM_16 AUGUSTUS CDS 44855 45772 1 - 0 ID=LTnewLM_160006900.1:CDS:1;Parent=LTnewLM_160006900.1 ### LTnewLM_16 . polypeptide 44855 45772 . - . ID=LTnewLM_160006900.1:pep;Derives_from=LTnewLM_160006900.1;orthologous_to=LmjF.16.0160_mRNA;ortholog_cluster=OG0001324;product=term%3DRibosomal protein L17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01196;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_16 Pfam protein_match 45281 45565 . - . Parent=LTnewLM_160006900.1:pep;Name=PF01196;signature_desc=Ribosomal protein L17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_16 AUGUSTUS gene 46247 59560 1 - . ID=LTnewLM_160007000 LTnewLM_16 AUGUSTUS mRNA 46247 59560 1 - . ID=LTnewLM_160007000.1;Parent=LTnewLM_160007000 LTnewLM_16 AUGUSTUS CDS 46247 59560 1 - 0 ID=LTnewLM_160007000.1:CDS:1;Parent=LTnewLM_160007000.1 ### LTnewLM_16 . polypeptide 46247 59560 . - . ID=LTnewLM_160007000.1:pep;Derives_from=LTnewLM_160007000.1;orthologous_to=LmjF.16.0170_mRNA;ortholog_cluster=OG0001325;product=term%3DKiaa1109 N-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20413 LTnewLM_16 Pfam protein_match 56183 59470 . - . Parent=LTnewLM_160007000.1:pep;Name=PF20413;signature_desc=Kiaa1109 N-terminal region ### LTnewLM_16 AUGUSTUS gene 62015 62785 1 - . ID=LTnewLM_160007100 LTnewLM_16 AUGUSTUS mRNA 62015 62785 1 - . ID=LTnewLM_160007100.1;Parent=LTnewLM_160007100 LTnewLM_16 AUGUSTUS CDS 62015 62785 1 - 0 ID=LTnewLM_160007100.1:CDS:1;Parent=LTnewLM_160007100.1 ### LTnewLM_16 . polypeptide 62015 62785 . - . ID=LTnewLM_160007100.1:pep;Derives_from=LTnewLM_160007100.1;orthologous_to=LmjF.16.0180_mRNA;ortholog_cluster=OG0001326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 64386 65447 1 - . ID=LTnewLM_160007200 LTnewLM_16 AUGUSTUS mRNA 64386 65447 1 - . ID=LTnewLM_160007200.1;Parent=LTnewLM_160007200 LTnewLM_16 AUGUSTUS CDS 64386 65447 1 - 0 ID=LTnewLM_160007200.1:CDS:1;Parent=LTnewLM_160007200.1 ### LTnewLM_16 . polypeptide 64386 65447 . - . ID=LTnewLM_160007200.1:pep;Derives_from=LTnewLM_160007200.1;orthologous_to=LmjF.16.0190_mRNA;ortholog_cluster=OG0001327;product=term%3DLas1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04031 LTnewLM_16 Pfam protein_match 64773 65204 . - . Parent=LTnewLM_160007200.1:pep;Name=PF04031;signature_desc=Las1-like ### LTnewLM_16 AUGUSTUS gene 67359 68258 1 - . ID=LTnewLM_160007300 LTnewLM_16 AUGUSTUS mRNA 67359 68258 1 - . ID=LTnewLM_160007300.1;Parent=LTnewLM_160007300 LTnewLM_16 AUGUSTUS CDS 67359 68258 1 - 0 ID=LTnewLM_160007300.1:CDS:1;Parent=LTnewLM_160007300.1 ### LTnewLM_16 . polypeptide 67359 68258 . - . ID=LTnewLM_160007300.1:pep;Derives_from=LTnewLM_160007300.1;orthologous_to=LmjF.16.0200_mRNA;ortholog_cluster=OG0001328;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_16 Pfam protein_match 67425 67688 . - . Parent=LTnewLM_160007300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_16 Pfam protein_match 67716 67973 . - . Parent=LTnewLM_160007300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_16 Pfam protein_match 68001 68255 . - . Parent=LTnewLM_160007300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_16 AUGUSTUS gene 72152 73303 1 - . ID=LTnewLM_160007400 LTnewLM_16 AUGUSTUS mRNA 72152 73303 1 - . ID=LTnewLM_160007400.1;Parent=LTnewLM_160007400 LTnewLM_16 AUGUSTUS CDS 72152 73303 1 - 0 ID=LTnewLM_160007400.1:CDS:1;Parent=LTnewLM_160007400.1 ### LTnewLM_16 . polypeptide 72152 73303 . - . ID=LTnewLM_160007400.1:pep;Derives_from=LTnewLM_160007400.1;orthologous_to=LmjF.16.0210_mRNA;ortholog_cluster=OG0001329;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_16 Pfam protein_match 72263 72517 . - . Parent=LTnewLM_160007400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_16 Pfam protein_match 72554 72823 . - . Parent=LTnewLM_160007400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_16 Pfam protein_match 72977 73288 . - . Parent=LTnewLM_160007400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_16 AUGUSTUS gene 74442 74837 1 - . ID=LTnewLM_160007500 LTnewLM_16 AUGUSTUS mRNA 74442 74837 1 - . ID=LTnewLM_160007500.1;Parent=LTnewLM_160007500 LTnewLM_16 AUGUSTUS CDS 74442 74837 1 - 0 ID=LTnewLM_160007500.1:CDS:1;Parent=LTnewLM_160007500.1 ### LTnewLM_16 . polypeptide 74442 74837 . - . ID=LTnewLM_160007500.1:pep;Derives_from=LTnewLM_160007500.1;orthologous_to=LmjF.16.0220_mRNA;ortholog_cluster=OG0001330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 76273 76800 1 - . ID=LTnewLM_160007600 LTnewLM_16 AUGUSTUS mRNA 76273 76800 1 - . ID=LTnewLM_160007600.1;Parent=LTnewLM_160007600 LTnewLM_16 AUGUSTUS CDS 76273 76800 1 - 0 ID=LTnewLM_160007600.1:CDS:1;Parent=LTnewLM_160007600.1 ### LTnewLM_16 . polypeptide 76273 76800 . - . ID=LTnewLM_160007600.1:pep;Derives_from=LTnewLM_160007600.1;orthologous_to=LmjF.16.0230_mRNA;ortholog_cluster=OG0001331;product=term%3DProtein-tyrosine phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00102;Ontology_term=GO:0006470,GO:0004725 LTnewLM_16 Pfam protein_match 76339 76602 . - . Parent=LTnewLM_160007600.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 ### LTnewLM_16 AUGUSTUS gene 79217 81496 1 - . ID=LTnewLM_160007700 LTnewLM_16 AUGUSTUS mRNA 79217 81496 1 - . ID=LTnewLM_160007700.1;Parent=LTnewLM_160007700 LTnewLM_16 AUGUSTUS CDS 79217 81496 1 - 0 ID=LTnewLM_160007700.1:CDS:1;Parent=LTnewLM_160007700.1 ### LTnewLM_16 . polypeptide 79217 81496 . - . ID=LTnewLM_160007700.1:pep;Derives_from=LTnewLM_160007700.1;orthologous_to=LmjF.16.0240_mRNA;ortholog_cluster=OG0001332;product=term%3DRadical SAM superfamily/Radical_SAM C-terminal domain/Acetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04055|Pfam:PF16199|Pfam:PF00583;Ontology_term=GO:0003824,GO:0051536,GO:0008080 LTnewLM_16 Pfam protein_match 79592 79927 . - . Parent=LTnewLM_160007700.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 LTnewLM_16 Pfam protein_match 80039 80272 . - . Parent=LTnewLM_160007700.1:pep;Name=PF16199;signature_desc=Radical_SAM C-terminal domain LTnewLM_16 Pfam protein_match 80354 80908 . - . Parent=LTnewLM_160007700.1:pep;Name=PF04055;signature_desc=Radical SAM superfamily;Ontology_term=GO:0003824,GO:0051536 ### LTnewLM_16 AUGUSTUS gene 83591 84121 1 - . ID=LTnewLM_160007800 LTnewLM_16 AUGUSTUS mRNA 83591 84121 1 - . ID=LTnewLM_160007800.1;Parent=LTnewLM_160007800 LTnewLM_16 AUGUSTUS CDS 83591 84121 1 - 0 ID=LTnewLM_160007800.1:CDS:1;Parent=LTnewLM_160007800.1 ### LTnewLM_16 . polypeptide 83591 84121 . - . ID=LTnewLM_160007800.1:pep;Derives_from=LTnewLM_160007800.1;orthologous_to=LmjF.16.0250_mRNA;ortholog_cluster=OG0001333;product=term%3DProtein-tyrosine phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00102;Ontology_term=GO:0006470,GO:0004725 LTnewLM_16 Pfam protein_match 83681 83932 . - . Parent=LTnewLM_160007800.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 ### LTnewLM_16 AUGUSTUS gene 86238 87725 1 - . ID=LTnewLM_160007900 LTnewLM_16 AUGUSTUS mRNA 86238 87725 1 - . ID=LTnewLM_160007900.1;Parent=LTnewLM_160007900 LTnewLM_16 AUGUSTUS CDS 86238 87725 1 - 0 ID=LTnewLM_160007900.1:CDS:1;Parent=LTnewLM_160007900.1 ### LTnewLM_16 . polypeptide 86238 87725 . - . ID=LTnewLM_160007900.1:pep;Derives_from=LTnewLM_160007900.1;orthologous_to=LmjF.16.0260_mRNA;ortholog_cluster=OG0001334;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13606|Pfam:PF00023|Pfam:PF12697;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 86682 86978 . - . Parent=LTnewLM_160007900.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_16 Pfam protein_match 87480 87662 . - . Parent=LTnewLM_160007900.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_16 Pfam protein_match 87513 87608 . - . Parent=LTnewLM_160007900.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 87522 87608 . - . Parent=LTnewLM_160007900.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_16 AUGUSTUS gene 88400 91528 1 - . ID=LTnewLM_160008000 LTnewLM_16 AUGUSTUS mRNA 88400 91528 1 - . ID=LTnewLM_160008000.1;Parent=LTnewLM_160008000 LTnewLM_16 AUGUSTUS CDS 88400 91528 1 - 0 ID=LTnewLM_160008000.1:CDS:1;Parent=LTnewLM_160008000.1 ### LTnewLM_16 . polypeptide 88400 91528 . - . ID=LTnewLM_160008000.1:pep;Derives_from=LTnewLM_160008000.1;orthologous_to=LmjF.16.0270_mRNA;ortholog_cluster=OG0001335;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 92525 101151 0.62 - . ID=LTnewLM_160008100 LTnewLM_16 AUGUSTUS mRNA 92525 101151 0.62 - . ID=LTnewLM_160008100.1;Parent=LTnewLM_160008100 LTnewLM_16 AUGUSTUS CDS 92525 96176 0.62 - 1 ID=LTnewLM_160008100.1:CDS:1;Parent=LTnewLM_160008100.1 LTnewLM_16 AUGUSTUS CDS 96341 101151 0.62 - 0 ID=LTnewLM_160008100.1:CDS:2;Parent=LTnewLM_160008100.1 ### LTnewLM_16 . polypeptide 92525 101151 . - . ID=LTnewLM_160008100.1:pep;Derives_from=LTnewLM_160008100.1;orthologous_to=LmjF.16.0280_mRNA;ortholog_cluster=OG0001336;product=term%3DInositol 1%2C4%2C5-trisphosphate/ryanodine receptor/RyR and IP3R Homology associated/Ion transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08709|Pfam:PF08454|Pfam:PF00520;Ontology_term=GO:0016020,GO:0055085,GO:0006811,GO:0005216 LTnewLM_16 Pfam protein_match 93265 93708 . - . Parent=LTnewLM_160008100.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_16 Pfam protein_match 95017 95274 . - . Parent=LTnewLM_160008100.1:pep;Name=PF08454;signature_desc=RyR and IP3R Homology associated LTnewLM_16 Pfam protein_match 100645 100935 . - . Parent=LTnewLM_160008100.1:pep;Name=PF08709;signature_desc=Inositol 1%2C4%2C5-trisphosphate/ryanodine receptor ### LTnewLM_16 AUGUSTUS gene 102576 103349 1 - . ID=LTnewLM_160008200 LTnewLM_16 AUGUSTUS mRNA 102576 103349 1 - . ID=LTnewLM_160008200.1;Parent=LTnewLM_160008200 LTnewLM_16 AUGUSTUS CDS 102576 103349 1 - 0 ID=LTnewLM_160008200.1:CDS:1;Parent=LTnewLM_160008200.1 ### LTnewLM_16 . polypeptide 102576 103349 . - . ID=LTnewLM_160008200.1:pep;Derives_from=LTnewLM_160008200.1;orthologous_to=LmjF.16.0290_mRNA;ortholog_cluster=OG0001337;product=term%3DNas2 N_terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18265 LTnewLM_16 Pfam protein_match 103014 103244 . - . Parent=LTnewLM_160008200.1:pep;Name=PF18265;signature_desc=Nas2 N_terminal domain ### LTnewLM_16 AUGUSTUS gene 103874 105709 1 - . ID=LTnewLM_160008300 LTnewLM_16 AUGUSTUS mRNA 103874 105709 1 - . ID=LTnewLM_160008300.1;Parent=LTnewLM_160008300 LTnewLM_16 AUGUSTUS CDS 103874 105709 1 - 0 ID=LTnewLM_160008300.1:CDS:1;Parent=LTnewLM_160008300.1 ### LTnewLM_16 . polypeptide 103874 105709 . - . ID=LTnewLM_160008300.1:pep;Derives_from=LTnewLM_160008300.1;orthologous_to=LmjF.16.0300_mRNA;ortholog_cluster=OG0001338;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_16 Pfam protein_match 104888 105649 . - . Parent=LTnewLM_160008300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_16 Pfam protein_match 104903 105646 . - . Parent=LTnewLM_160008300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_16 Pfam protein_match 105194 105427 . - . Parent=LTnewLM_160008300.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_16 AUGUSTUS gene 108046 110115 1 - . ID=LTnewLM_160008400 LTnewLM_16 AUGUSTUS mRNA 108046 110115 1 - . ID=LTnewLM_160008400.1;Parent=LTnewLM_160008400 LTnewLM_16 AUGUSTUS CDS 108046 110115 1 - 0 ID=LTnewLM_160008400.1:CDS:1;Parent=LTnewLM_160008400.1 ### LTnewLM_16 . polypeptide 108046 110115 . - . ID=LTnewLM_160008400.1:pep;Derives_from=LTnewLM_160008400.1;orthologous_to=LmjF.16.0310_mRNA;ortholog_cluster=OG0001339;product=term%3DMet-10+ like-protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02475 LTnewLM_16 Pfam protein_match 108496 108912 . - . Parent=LTnewLM_160008400.1:pep;Name=PF02475;signature_desc=Met-10+ like-protein LTnewLM_16 Pfam protein_match 109090 109257 . - . Parent=LTnewLM_160008400.1:pep;Name=PF02475;signature_desc=Met-10+ like-protein ### LTnewLM_16 AUGUSTUS gene 111931 115743 1 - . ID=LTnewLM_160008500 LTnewLM_16 AUGUSTUS mRNA 111931 115743 1 - . ID=LTnewLM_160008500.1;Parent=LTnewLM_160008500 LTnewLM_16 AUGUSTUS CDS 111931 115743 1 - 0 ID=LTnewLM_160008500.1:CDS:1;Parent=LTnewLM_160008500.1 ### LTnewLM_16 . polypeptide 111931 115743 . - . ID=LTnewLM_160008500.1:pep;Derives_from=LTnewLM_160008500.1;orthologous_to=LmjF.16.0320_mRNA;ortholog_cluster=OG0001340;product=term%3DFHA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 115441 115674 . - . Parent=LTnewLM_160008500.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 ### LTnewLM_16 AUGUSTUS gene 117080 118243 1 - . ID=LTnewLM_160008600 LTnewLM_16 AUGUSTUS mRNA 117080 118243 1 - . ID=LTnewLM_160008600.1;Parent=LTnewLM_160008600 LTnewLM_16 AUGUSTUS CDS 117080 118243 1 - 0 ID=LTnewLM_160008600.1:CDS:1;Parent=LTnewLM_160008600.1 ### LTnewLM_16 . polypeptide 117080 118243 . - . ID=LTnewLM_160008600.1:pep;Derives_from=LTnewLM_160008600.1;orthologous_to=LmjF.16.0330_mRNA;ortholog_cluster=OG0001341;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 118982 119839 1 - . ID=LTnewLM_160008700 LTnewLM_16 AUGUSTUS mRNA 118982 119839 1 - . ID=LTnewLM_160008700.1;Parent=LTnewLM_160008700 LTnewLM_16 AUGUSTUS CDS 118982 119839 1 - 0 ID=LTnewLM_160008700.1:CDS:1;Parent=LTnewLM_160008700.1 ### LTnewLM_16 . polypeptide 118982 119839 . - . ID=LTnewLM_160008700.1:pep;Derives_from=LTnewLM_160008700.1;orthologous_to=LmjF.16.0340_mRNA;ortholog_cluster=OG0001342;product=term%3DEXPERA (EXPanded EBP superfamily)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05241;Ontology_term=GO:0047750,GO:0016125,GO:0016021 LTnewLM_16 Pfam protein_match 119087 119374 . - . Parent=LTnewLM_160008700.1:pep;Name=PF05241;signature_desc=EXPERA (EXPanded EBP superfamily);Ontology_term=GO:0047750,GO:0016125,GO:0016021 ### LTnewLM_16 AUGUSTUS gene 120420 121742 1 - . ID=LTnewLM_160008800 LTnewLM_16 AUGUSTUS mRNA 120420 121742 1 - . ID=LTnewLM_160008800.1;Parent=LTnewLM_160008800 LTnewLM_16 AUGUSTUS CDS 120420 121742 1 - 0 ID=LTnewLM_160008800.1:CDS:1;Parent=LTnewLM_160008800.1 ### LTnewLM_16 . polypeptide 120420 121742 . - . ID=LTnewLM_160008800.1:pep;Derives_from=LTnewLM_160008800.1;orthologous_to=LmjF.16.0350_mRNA;ortholog_cluster=OG0001343;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13532 LTnewLM_16 Pfam protein_match 120507 121271 . - . Parent=LTnewLM_160008800.1:pep;Name=PF13532;signature_desc=2OG-Fe(II) oxygenase superfamily ### LTnewLM_16 AUGUSTUS gene 123678 125741 1 - . ID=LTnewLM_160008900 LTnewLM_16 AUGUSTUS mRNA 123678 125741 1 - . ID=LTnewLM_160008900.1;Parent=LTnewLM_160008900 LTnewLM_16 AUGUSTUS CDS 123678 125741 1 - 0 ID=LTnewLM_160008900.1:CDS:1;Parent=LTnewLM_160008900.1 ### LTnewLM_16 . polypeptide 123678 125741 . - . ID=LTnewLM_160008900.1:pep;Derives_from=LTnewLM_160008900.1;orthologous_to=LmjF.16.0360_mRNA;ortholog_cluster=OG0001344;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 126576 128045 1 - . ID=LTnewLM_160009000 LTnewLM_16 AUGUSTUS mRNA 126576 128045 1 - . ID=LTnewLM_160009000.1;Parent=LTnewLM_160009000 LTnewLM_16 AUGUSTUS CDS 126576 128045 1 - 0 ID=LTnewLM_160009000.1:CDS:1;Parent=LTnewLM_160009000.1 ### LTnewLM_16 . polypeptide 126576 128045 . - . ID=LTnewLM_160009000.1:pep;Derives_from=LTnewLM_160009000.1;orthologous_to=LmjF.16.0370_mRNA;ortholog_cluster=OG0001345;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 130687 133140 1 - . ID=LTnewLM_160009100 LTnewLM_16 AUGUSTUS mRNA 130687 133140 1 - . ID=LTnewLM_160009100.1;Parent=LTnewLM_160009100 LTnewLM_16 AUGUSTUS CDS 130687 133140 1 - 0 ID=LTnewLM_160009100.1:CDS:1;Parent=LTnewLM_160009100.1 ### LTnewLM_16 . polypeptide 130687 133140 . - . ID=LTnewLM_160009100.1:pep;Derives_from=LTnewLM_160009100.1;orthologous_to=LmjF.16.0380_mRNA;ortholog_cluster=OG0001346;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_16 Pfam protein_match 130789 131334 . - . Parent=LTnewLM_160009100.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 LTnewLM_16 Pfam protein_match 131578 132006 . - . Parent=LTnewLM_160009100.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_16 AUGUSTUS gene 134961 137921 1 - . ID=LTnewLM_160009200 LTnewLM_16 AUGUSTUS mRNA 134961 137921 1 - . ID=LTnewLM_160009200.1;Parent=LTnewLM_160009200 LTnewLM_16 AUGUSTUS CDS 134961 137921 1 - 0 ID=LTnewLM_160009200.1:CDS:1;Parent=LTnewLM_160009200.1 ### LTnewLM_16 . polypeptide 134961 137921 . - . ID=LTnewLM_160009200.1:pep;Derives_from=LTnewLM_160009200.1;orthologous_to=LmjF.16.0390_mRNA;ortholog_cluster=OG0001347;product=term%3DXRN 5'-3' exonuclease N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159;Ontology_term=GO:0003676,GO:0004527 LTnewLM_16 Pfam protein_match 137397 137618 . - . Parent=LTnewLM_160009200.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 ### LTnewLM_16 . pseudogene 138897 139967 . - . ID=LTnewLM_160009300:pseudogene;coverage=1.0;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.0400_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 138897 139967 . - . ID=LTnewLM_160009300.1;Parent=LTnewLM_160009300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 138897 139967 . - . ID=LTnewLM_160009300.1:pseudogenic_exon:1;Parent=LTnewLM_160009300.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 138897 139967 . - . ID=LTnewLM_160009300.1:pep;Derives_from=LTnewLM_160009300.1;orthologous_to=LmjF.16.0400_mRNA;ortholog_cluster=OG0007468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 141368 143323 1 - . ID=LTnewLM_160009400 LTnewLM_16 AUGUSTUS mRNA 141368 143323 1 - . ID=LTnewLM_160009400.1;Parent=LTnewLM_160009400 LTnewLM_16 AUGUSTUS CDS 141368 143323 1 - 0 ID=LTnewLM_160009400.1:CDS:1;Parent=LTnewLM_160009400.1 ### LTnewLM_16 . polypeptide 141368 143323 . - . ID=LTnewLM_160009400.1:pep;Derives_from=LTnewLM_160009400.1;orthologous_to=LmjF.16.0410_mRNA;ortholog_cluster=OG0001348;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 144535 147117 0.79 - . ID=LTnewLM_160009500 LTnewLM_16 AUGUSTUS mRNA 144535 147117 0.79 - . ID=LTnewLM_160009500.1;Parent=LTnewLM_160009500 LTnewLM_16 AUGUSTUS CDS 144535 147117 0.79 - 0 ID=LTnewLM_160009500.1:CDS:1;Parent=LTnewLM_160009500.1 ### LTnewLM_16 . polypeptide 144535 147117 . - . ID=LTnewLM_160009500.1:pep;Derives_from=LTnewLM_160009500.1;orthologous_to=LmjF.16.0420_mRNA;ortholog_cluster=OG0001349;product=term%3DPyridoxal-dependent decarboxylase conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00282;Ontology_term=GO:0030170,GO:0019752,GO:0016831 LTnewLM_16 Pfam protein_match 145549 146094 . - . Parent=LTnewLM_160009500.1:pep;Name=PF00282;signature_desc=Pyridoxal-dependent decarboxylase conserved domain;Ontology_term=GO:0016831,GO:0030170,GO:0019752 ### LTnewLM_16 AUGUSTUS gene 148360 148896 1 - . ID=LTnewLM_160009600 LTnewLM_16 AUGUSTUS mRNA 148360 148896 1 - . ID=LTnewLM_160009600.1;Parent=LTnewLM_160009600 LTnewLM_16 AUGUSTUS CDS 148360 148896 1 - 0 ID=LTnewLM_160009600.1:CDS:1;Parent=LTnewLM_160009600.1 ### LTnewLM_16 . polypeptide 148360 148896 . - . ID=LTnewLM_160009600.1:pep;Derives_from=LTnewLM_160009600.1;orthologous_to=LmjF.16.0430_mRNA;ortholog_cluster=OG0001350;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 150622 154236 1 - . ID=LTnewLM_160009700 LTnewLM_16 AUGUSTUS mRNA 150622 154236 1 - . ID=LTnewLM_160009700.1;Parent=LTnewLM_160009700 LTnewLM_16 AUGUSTUS CDS 150622 154236 1 - 0 ID=LTnewLM_160009700.1:CDS:1;Parent=LTnewLM_160009700.1 ### LTnewLM_16 . polypeptide 150622 154236 . - . ID=LTnewLM_160009700.1:pep;Derives_from=LTnewLM_160009700.1;orthologous_to=LTnewLM_160010100.1,LmjF.16.0440_mRNA,LmjF.16.0480_mRNA;ortholog_cluster=OG0000128;product=term%3DL-fucokinase/GHMP kinases N terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07959|Pfam:PF00288;Ontology_term=GO:0005524,GO:0016772 LTnewLM_16 Pfam protein_match 151186 151350 . - . Parent=LTnewLM_160009700.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 LTnewLM_16 Pfam protein_match 153334 153933 . - . Parent=LTnewLM_160009700.1:pep;Name=PF07959;signature_desc=L-fucokinase;Ontology_term=GO:0016772 ### LTnewLM_16 AUGUSTUS gene 157413 158174 1 - . ID=LTnewLM_160009800 LTnewLM_16 AUGUSTUS mRNA 157413 158174 1 - . ID=LTnewLM_160009800.1;Parent=LTnewLM_160009800 LTnewLM_16 AUGUSTUS CDS 157413 158174 1 - 0 ID=LTnewLM_160009800.1:CDS:1;Parent=LTnewLM_160009800.1 ### LTnewLM_16 . polypeptide 157413 158174 . - . ID=LTnewLM_160009800.1:pep;Derives_from=LTnewLM_160009800.1;orthologous_to=LmjF.16.0450_mRNA;ortholog_cluster=OG0001351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 159268 159747 1 - . ID=LTnewLM_160009900 LTnewLM_16 AUGUSTUS mRNA 159268 159747 1 - . ID=LTnewLM_160009900.1;Parent=LTnewLM_160009900 LTnewLM_16 AUGUSTUS CDS 159268 159747 1 - 0 ID=LTnewLM_160009900.1:CDS:1;Parent=LTnewLM_160009900.1 ### LTnewLM_16 . polypeptide 159268 159747 . - . ID=LTnewLM_160009900.1:pep;Derives_from=LTnewLM_160009900.1;orthologous_to=LTnewLM_340043200.1,LmjF.16.0460_mRNA;ortholog_cluster=OG0000347;product=term%3DRibosomal protein L21e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01157;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_16 Pfam protein_match 159448 159747 . - . Parent=LTnewLM_160009900.1:pep;Name=PF01157;signature_desc=Ribosomal protein L21e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_16 AUGUSTUS gene 163054 163608 1 - . ID=LTnewLM_160010000 LTnewLM_16 AUGUSTUS mRNA 163054 163608 1 - . ID=LTnewLM_160010000.1;Parent=LTnewLM_160010000 LTnewLM_16 AUGUSTUS CDS 163054 163608 1 - 0 ID=LTnewLM_160010000.1:CDS:1;Parent=LTnewLM_160010000.1 ### LTnewLM_16 . polypeptide 163054 163608 . - . ID=LTnewLM_160010000.1:pep;Derives_from=LTnewLM_160010000.1;orthologous_to=LmjF.16.0470_mRNA;ortholog_cluster=OG0001352;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 165045 168659 1 - . ID=LTnewLM_160010100 LTnewLM_16 AUGUSTUS mRNA 165045 168659 1 - . ID=LTnewLM_160010100.1;Parent=LTnewLM_160010100 LTnewLM_16 AUGUSTUS CDS 165045 168659 1 - 0 ID=LTnewLM_160010100.1:CDS:1;Parent=LTnewLM_160010100.1 ### LTnewLM_16 . polypeptide 165045 168659 . - . ID=LTnewLM_160010100.1:pep;Derives_from=LTnewLM_160010100.1;orthologous_to=LTnewLM_160009700.1,LmjF.16.0440_mRNA,LmjF.16.0480_mRNA;ortholog_cluster=OG0000128;product=term%3DL-fucokinase/GHMP kinases N terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07959|Pfam:PF00288;Ontology_term=GO:0005524,GO:0016772 LTnewLM_16 Pfam protein_match 165609 165773 . - . Parent=LTnewLM_160010100.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 LTnewLM_16 Pfam protein_match 167760 168356 . - . Parent=LTnewLM_160010100.1:pep;Name=PF07959;signature_desc=L-fucokinase;Ontology_term=GO:0016772 ### LTnewLM_16 AUGUSTUS gene 172662 173261 1 - . ID=LTnewLM_160010200 LTnewLM_16 AUGUSTUS mRNA 172662 173261 1 - . ID=LTnewLM_160010200.1;Parent=LTnewLM_160010200 LTnewLM_16 AUGUSTUS CDS 172662 173261 1 - 0 ID=LTnewLM_160010200.1:CDS:1;Parent=LTnewLM_160010200.1 ### LTnewLM_16 . polypeptide 172662 173261 . - . ID=LTnewLM_160010200.1:pep;Derives_from=LTnewLM_160010200.1;orthologous_to=LmjF.16.0490_mRNA;ortholog_cluster=OG0001353;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 177378 178046 1 - . ID=LTnewLM_160010300 LTnewLM_16 AUGUSTUS mRNA 177378 178046 1 - . ID=LTnewLM_160010300.1;Parent=LTnewLM_160010300 LTnewLM_16 AUGUSTUS CDS 177378 178046 1 - 0 ID=LTnewLM_160010300.1:CDS:1;Parent=LTnewLM_160010300.1 ### LTnewLM_16 . polypeptide 177378 178046 . - . ID=LTnewLM_160010300.1:pep;Derives_from=LTnewLM_160010300.1;orthologous_to=LmjF.16.0500_mRNA;ortholog_cluster=OG0001354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 179888 183472 1 - . ID=LTnewLM_160010400 LTnewLM_16 AUGUSTUS mRNA 179888 183472 1 - . ID=LTnewLM_160010400.1;Parent=LTnewLM_160010400 LTnewLM_16 AUGUSTUS CDS 179888 183472 1 - 0 ID=LTnewLM_160010400.1:CDS:1;Parent=LTnewLM_160010400.1 ### LTnewLM_16 . polypeptide 179888 183472 . - . ID=LTnewLM_160010400.1:pep;Derives_from=LTnewLM_160010400.1;orthologous_to=LmjF.16.0510_mRNA;ortholog_cluster=OG0001355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 185939 186925 1 - . ID=LTnewLM_160010500 LTnewLM_16 AUGUSTUS mRNA 185939 186925 1 - . ID=LTnewLM_160010500.1;Parent=LTnewLM_160010500 LTnewLM_16 AUGUSTUS CDS 185939 186925 1 - 0 ID=LTnewLM_160010500.1:CDS:1;Parent=LTnewLM_160010500.1 ### LTnewLM_16 . polypeptide 185939 186925 . - . ID=LTnewLM_160010500.1:pep;Derives_from=LTnewLM_160010500.1;orthologous_to=LmjF.16.0520_mRNA;ortholog_cluster=OG0001356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . pseudogene 188675 189637 . - . ID=LTnewLM_160010600:pseudogene;coverage=1.0;sequence_ID=0.961;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.0530_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 188675 189637 . - . ID=LTnewLM_160010600.1;Parent=LTnewLM_160010600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 188675 189637 . - . ID=LTnewLM_160010600.1:pseudogenic_exon:1;Parent=LTnewLM_160010600.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 188675 189637 . - . ID=LTnewLM_160010600.1:pep;Derives_from=LTnewLM_160010600.1;orthologous_to=LmjF.16.0530_mRNA;ortholog_cluster=OG0007469;product=term%3DDihydroorotate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01180;Ontology_term=GO:0055114,GO:0006222,GO:0004152 LTnewLM_16 Pfam protein_match 188759 189631 . - . Parent=LTnewLM_160010600.1:pep;Name=PF01180;signature_desc=Dihydroorotate dehydrogenase;Ontology_term=GO:0004152,GO:0006222,GO:0055114 ### LTnewLM_16 AUGUSTUS gene 191098 192081 1 - . ID=LTnewLM_160010700 LTnewLM_16 AUGUSTUS mRNA 191098 192081 1 - . ID=LTnewLM_160010700.1;Parent=LTnewLM_160010700 LTnewLM_16 AUGUSTUS CDS 191098 192081 1 - 0 ID=LTnewLM_160010700.1:CDS:1;Parent=LTnewLM_160010700.1 ### LTnewLM_16 . polypeptide 191098 192081 . - . ID=LTnewLM_160010700.1:pep;Derives_from=LTnewLM_160010700.1;orthologous_to=LmjF.16.0540_mRNA;ortholog_cluster=OG0001357;product=term%3DAspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain/Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02729|Pfam:PF00185;Ontology_term=GO:0006520,GO:0016597,GO:0016743 LTnewLM_16 Pfam protein_match 191113 191604 . - . Parent=LTnewLM_160010700.1:pep;Name=PF00185;signature_desc=Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain;Ontology_term=GO:0016597,GO:0016743,GO:0006520 LTnewLM_16 Pfam protein_match 191626 192039 . - . Parent=LTnewLM_160010700.1:pep;Name=PF02729;signature_desc=Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain;Ontology_term=GO:0016743,GO:0006520 ### LTnewLM_16 AUGUSTUS gene 193027 193512 1 - . ID=LTnewLM_160010800 LTnewLM_16 AUGUSTUS mRNA 193027 193512 1 - . ID=LTnewLM_160010800.1;Parent=LTnewLM_160010800 LTnewLM_16 AUGUSTUS CDS 193027 193512 1 - 0 ID=LTnewLM_160010800.1:CDS:1;Parent=LTnewLM_160010800.1 ### LTnewLM_16 . polypeptide 193027 193512 . - . ID=LTnewLM_160010800.1:pep;Derives_from=LTnewLM_160010800.1;product=term%3Dhypothetical protein ### LTnewLM_16 AUGUSTUS gene 195194 196567 1 - . ID=LTnewLM_160010900 LTnewLM_16 AUGUSTUS mRNA 195194 196567 1 - . ID=LTnewLM_160010900.1;Parent=LTnewLM_160010900 LTnewLM_16 AUGUSTUS CDS 195194 196567 1 - 0 ID=LTnewLM_160010900.1:CDS:1;Parent=LTnewLM_160010900.1 ### LTnewLM_16 . polypeptide 195194 196567 . - . ID=LTnewLM_160010900.1:pep;Derives_from=LTnewLM_160010900.1;orthologous_to=LmjF.16.0550_mRNA;ortholog_cluster=OG0001358;product=term%3DOrotidine 5'-phosphate decarboxylase / HUMPS family/Phosphoribosyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00215|Pfam:PF00156;Ontology_term=GO:0004590,GO:0009116,GO:0006207 LTnewLM_16 Pfam protein_match 195353 195685 . - . Parent=LTnewLM_160010900.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 LTnewLM_16 Pfam protein_match 195842 196525 . - . Parent=LTnewLM_160010900.1:pep;Name=PF00215;signature_desc=Orotidine 5'-phosphate decarboxylase / HUMPS family;Ontology_term=GO:0004590,GO:0006207 ### LTnewLM_16 AUGUSTUS gene 197189 199390 1 - . ID=LTnewLM_160011000 LTnewLM_16 AUGUSTUS mRNA 197189 199390 1 - . ID=LTnewLM_160011000.1;Parent=LTnewLM_160011000 LTnewLM_16 AUGUSTUS CDS 197189 199390 1 - 0 ID=LTnewLM_160011000.1:CDS:1;Parent=LTnewLM_160011000.1 ### LTnewLM_16 . polypeptide 197189 199390 . - . ID=LTnewLM_160011000.1:pep;Derives_from=LTnewLM_160011000.1;orthologous_to=LmjF.16.0560_mRNA;ortholog_cluster=OG0001359;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 200598 200990 1 - . ID=LTnewLM_160011100 LTnewLM_16 AUGUSTUS mRNA 200598 200990 1 - . ID=LTnewLM_160011100.1;Parent=LTnewLM_160011100 LTnewLM_16 AUGUSTUS CDS 200598 200990 1 - 0 ID=LTnewLM_160011100.1:CDS:1;Parent=LTnewLM_160011100.1 ### LTnewLM_16 . polypeptide 200598 200990 . - . ID=LTnewLM_160011100.1:pep;Derives_from=LTnewLM_160011100.1;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_16 Pfam protein_match 200616 200990 . - . Parent=LTnewLM_160011100.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_16 Pfam protein_match 200625 200822 . - . Parent=LTnewLM_160011100.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_16 AUGUSTUS gene 201464 201856 1 - . ID=LTnewLM_160011200 LTnewLM_16 AUGUSTUS mRNA 201464 201856 1 - . ID=LTnewLM_160011200.1;Parent=LTnewLM_160011200 LTnewLM_16 AUGUSTUS CDS 201464 201856 1 - 0 ID=LTnewLM_160011200.1:CDS:1;Parent=LTnewLM_160011200.1 ### LTnewLM_16 . polypeptide 201464 201856 . - . ID=LTnewLM_160011200.1:pep;Derives_from=LTnewLM_160011200.1;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_16 Pfam protein_match 201482 201856 . - . Parent=LTnewLM_160011200.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_16 Pfam protein_match 201491 201688 . - . Parent=LTnewLM_160011200.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_16 AUGUSTUS gene 203273 204490 1 - . ID=LTnewLM_160011300 LTnewLM_16 AUGUSTUS mRNA 203273 204490 1 - . ID=LTnewLM_160011300.1;Parent=LTnewLM_160011300 LTnewLM_16 AUGUSTUS CDS 203273 204490 1 - 0 ID=LTnewLM_160011300.1:CDS:1;Parent=LTnewLM_160011300.1 ### LTnewLM_16 . polypeptide 203273 204490 . - . ID=LTnewLM_160011300.1:pep;Derives_from=LTnewLM_160011300.1;orthologous_to=LmjF.16.0580_mRNA;ortholog_cluster=OG0001360;product=term%3DAmidohydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01979;Ontology_term=GO:0016787 LTnewLM_16 Pfam protein_match 203582 204451 . - . Parent=LTnewLM_160011300.1:pep;Name=PF01979;signature_desc=Amidohydrolase family;Ontology_term=GO:0016787 ### LTnewLM_16 AUGUSTUS gene 206191 211719 1 - . ID=LTnewLM_160011400 LTnewLM_16 AUGUSTUS mRNA 206191 211719 1 - . ID=LTnewLM_160011400.1;Parent=LTnewLM_160011400 LTnewLM_16 AUGUSTUS CDS 206191 211719 1 - 0 ID=LTnewLM_160011400.1:CDS:1;Parent=LTnewLM_160011400.1 ### LTnewLM_16 . polypeptide 206191 211719 . - . ID=LTnewLM_160011400.1:pep;Derives_from=LTnewLM_160011400.1;orthologous_to=LmjF.16.0590_mRNA;ortholog_cluster=OG0001361;product=term%3DCarbamoyl-phosphate synthase small chain%2C CPSase domain/Glutamine amidotransferase class-I/Peptidase C26/Carbamoyl-phosphate synthase L chain%2C ATP binding domain/Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain/ATP-grasp domain/D-ala D-ala ligase C-terminus/MGS-like domain/Arginosuccinate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00988|Pfam:PF00117|Pfam:PF07722|Pfam:PF02786|Pfam:PF02787|Pfam:PF02222|Pfam:PF07478|Pfam:PF02142|Pfam:PF00764;Ontology_term=GO:0016787,GO:0005524,GO:0008716,GO:0004055,GO:0006541,GO:0006526 LTnewLM_16 Pfam protein_match 206317 207237 . - . Parent=LTnewLM_160011400.1:pep;Name=PF00764;signature_desc=Arginosuccinate synthase;Ontology_term=GO:0004055,GO:0005524,GO:0006526 LTnewLM_16 Pfam protein_match 207445 207762 . - . Parent=LTnewLM_160011400.1:pep;Name=PF02142;signature_desc=MGS-like domain LTnewLM_16 Pfam protein_match 208051 208614 . - . Parent=LTnewLM_160011400.1:pep;Name=PF02786;signature_desc=Carbamoyl-phosphate synthase L chain%2C ATP binding domain;Ontology_term=GO:0005524 LTnewLM_16 Pfam protein_match 208099 208587 . - . Parent=LTnewLM_160011400.1:pep;Name=PF02222;signature_desc=ATP-grasp domain LTnewLM_16 Pfam protein_match 208102 208581 . - . Parent=LTnewLM_160011400.1:pep;Name=PF07478;signature_desc=D-ala D-ala ligase C-terminus;Ontology_term=GO:0008716 LTnewLM_16 Pfam protein_match 209122 209367 . - . Parent=LTnewLM_160011400.1:pep;Name=PF02787;signature_desc=Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain LTnewLM_16 Pfam protein_match 209641 210243 . - . Parent=LTnewLM_160011400.1:pep;Name=PF02786;signature_desc=Carbamoyl-phosphate synthase L chain%2C ATP binding domain;Ontology_term=GO:0005524 LTnewLM_16 Pfam protein_match 210658 211173 . - . Parent=LTnewLM_160011400.1:pep;Name=PF00117;signature_desc=Glutamine amidotransferase class-I LTnewLM_16 Pfam protein_match 210898 211014 . - . Parent=LTnewLM_160011400.1:pep;Name=PF07722;signature_desc=Peptidase C26;Ontology_term=GO:0016787,GO:0006541 LTnewLM_16 Pfam protein_match 211291 211695 . - . Parent=LTnewLM_160011400.1:pep;Name=PF00988;signature_desc=Carbamoyl-phosphate synthase small chain%2C CPSase domain ### LTnewLM_16 AUGUSTUS gene 214359 214751 1 - . ID=LTnewLM_160011500 LTnewLM_16 AUGUSTUS mRNA 214359 214751 1 - . ID=LTnewLM_160011500.1;Parent=LTnewLM_160011500 LTnewLM_16 AUGUSTUS CDS 214359 214751 1 - 0 ID=LTnewLM_160011500.1:CDS:1;Parent=LTnewLM_160011500.1 ### LTnewLM_16 . polypeptide 214359 214751 . - . ID=LTnewLM_160011500.1:pep;Derives_from=LTnewLM_160011500.1;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_16 Pfam protein_match 214377 214751 . - . Parent=LTnewLM_160011500.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_16 Pfam protein_match 214386 214583 . - . Parent=LTnewLM_160011500.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_16 AUGUSTUS gene 215213 215605 1 - . ID=LTnewLM_160011600 LTnewLM_16 AUGUSTUS mRNA 215213 215605 1 - . ID=LTnewLM_160011600.1;Parent=LTnewLM_160011600 LTnewLM_16 AUGUSTUS CDS 215213 215605 1 - 0 ID=LTnewLM_160011600.1:CDS:1;Parent=LTnewLM_160011600.1 ### LTnewLM_16 . polypeptide 215213 215605 . - . ID=LTnewLM_160011600.1:pep;Derives_from=LTnewLM_160011600.1;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_16 Pfam protein_match 215231 215605 . - . Parent=LTnewLM_160011600.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_16 Pfam protein_match 215240 215437 . - . Parent=LTnewLM_160011600.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_16 AUGUSTUS gene 216395 219802 1 - . ID=LTnewLM_160011700 LTnewLM_16 AUGUSTUS mRNA 216395 219802 1 - . ID=LTnewLM_160011700.1;Parent=LTnewLM_160011700 LTnewLM_16 AUGUSTUS CDS 216395 219802 1 - 0 ID=LTnewLM_160011700.1:CDS:1;Parent=LTnewLM_160011700.1 ### LTnewLM_16 . polypeptide 216395 219802 . - . ID=LTnewLM_160011700.1:pep;Derives_from=LTnewLM_160011700.1;orthologous_to=LmjF.16.0620_mRNA;ortholog_cluster=OG0001362;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 220509 222464 1 - . ID=LTnewLM_160011800 LTnewLM_16 AUGUSTUS mRNA 220509 222464 1 - . ID=LTnewLM_160011800.1;Parent=LTnewLM_160011800 LTnewLM_16 AUGUSTUS CDS 220509 222464 1 - 0 ID=LTnewLM_160011800.1:CDS:1;Parent=LTnewLM_160011800.1 ### LTnewLM_16 . polypeptide 220509 222464 . - . ID=LTnewLM_160011800.1:pep;Derives_from=LTnewLM_160011800.1;orthologous_to=LmjF.16.0630_mRNA;ortholog_cluster=OG0001363;product=term%3DType IIB DNA topoisomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04406;Ontology_term=GO:0003824,GO:0005694,GO:0005524,GO:0006259,GO:0003677 LTnewLM_16 Pfam protein_match 221892 222059 . - . Parent=LTnewLM_160011800.1:pep;Name=PF04406;signature_desc=Type IIB DNA topoisomerase;Ontology_term=GO:0003677,GO:0003824,GO:0005524,GO:0006259,GO:0005694 ### LTnewLM_16 AUGUSTUS gene 223015 225115 0.72 - . ID=LTnewLM_160011900 LTnewLM_16 AUGUSTUS mRNA 223015 225115 0.72 - . ID=LTnewLM_160011900.1;Parent=LTnewLM_160011900 LTnewLM_16 AUGUSTUS CDS 223015 224941 0.72 - 1 ID=LTnewLM_160011900.1:CDS:1;Parent=LTnewLM_160011900.1 LTnewLM_16 AUGUSTUS CDS 225102 225115 1 - 0 ID=LTnewLM_160011900.1:CDS:2;Parent=LTnewLM_160011900.1 ### LTnewLM_16 . polypeptide 223015 225115 . - . ID=LTnewLM_160011900.1:pep;Derives_from=LTnewLM_160011900.1;orthologous_to=LmjF.16.0640_mRNA;ortholog_cluster=OG0001364;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_16 Pfam protein_match 223307 223516 . - . Parent=LTnewLM_160011900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_16 AUGUSTUS gene 226156 226473 1 - . ID=LTnewLM_160012000 LTnewLM_16 AUGUSTUS mRNA 226156 226473 1 - . ID=LTnewLM_160012000.1;Parent=LTnewLM_160012000 LTnewLM_16 AUGUSTUS CDS 226156 226473 1 - 0 ID=LTnewLM_160012000.1:CDS:1;Parent=LTnewLM_160012000.1 ### LTnewLM_16 . polypeptide 226156 226473 . - . ID=LTnewLM_160012000.1:pep;Derives_from=LTnewLM_160012000.1;orthologous_to=LmjF.16.0650_mRNA;ortholog_cluster=OG0001365;product=term%3DRING-H2 zinc finger domain/Anaphase-promoting complex subunit 11 RING-H2 finger/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12678|Pfam:PF12861|Pfam:PF13639;Ontology_term=GO:0005680,GO:0005515,GO:0004842,GO:0008270 LTnewLM_16 Pfam protein_match 226183 226347 . - . Parent=LTnewLM_160012000.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_16 Pfam protein_match 226198 226311 . - . Parent=LTnewLM_160012000.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_16 Pfam protein_match 226198 226347 . - . Parent=LTnewLM_160012000.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 ### LTnewLM_16 AUGUSTUS gene 227454 228005 1 - . ID=LTnewLM_160012100 LTnewLM_16 AUGUSTUS mRNA 227454 228005 1 - . ID=LTnewLM_160012100.1;Parent=LTnewLM_160012100 LTnewLM_16 AUGUSTUS CDS 227454 228005 1 - 0 ID=LTnewLM_160012100.1:CDS:1;Parent=LTnewLM_160012100.1 ### LTnewLM_16 . polypeptide 227454 228005 . - . ID=LTnewLM_160012100.1:pep;Derives_from=LTnewLM_160012100.1;product=term%3DRING-H2 zinc finger domain/Anaphase-promoting complex subunit 11 RING-H2 finger/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12678|Pfam:PF12861|Pfam:PF13639;Ontology_term=GO:0005680,GO:0005515,GO:0004842,GO:0008270 LTnewLM_16 Pfam protein_match 227478 227594 . - . Parent=LTnewLM_160012100.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_16 Pfam protein_match 227499 227585 . - . Parent=LTnewLM_160012100.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_16 Pfam protein_match 227499 227594 . - . Parent=LTnewLM_160012100.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 ### LTnewLM_16 AUGUSTUS gene 228917 230791 1 - . ID=LTnewLM_160012200 LTnewLM_16 AUGUSTUS mRNA 228917 230791 1 - . ID=LTnewLM_160012200.1;Parent=LTnewLM_160012200 LTnewLM_16 AUGUSTUS CDS 228917 230791 1 - 0 ID=LTnewLM_160012200.1:CDS:1;Parent=LTnewLM_160012200.1 ### LTnewLM_16 . polypeptide 228917 230791 . - . ID=LTnewLM_160012200.1:pep;Derives_from=LTnewLM_160012200.1;orthologous_to=LmjF.16.0660_mRNA;ortholog_cluster=OG0001366;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . pseudogene 232393 234420 . - . ID=LTnewLM_160012300:pseudogene;coverage=1.0;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.0670_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 232393 234420 . - . ID=LTnewLM_160012300.1;Parent=LTnewLM_160012300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 232393 234420 . - . ID=LTnewLM_160012300.1:pseudogenic_exon:1;Parent=LTnewLM_160012300.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 232393 234420 . - . ID=LTnewLM_160012300.1:pep;Derives_from=LTnewLM_160012300.1;orthologous_to=LmjF.16.0670_mRNA;ortholog_cluster=OG0007470;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_16 Pfam protein_match 233473 233679 . - . Parent=LTnewLM_160012300.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_16 AUGUSTUS gene 235952 237295 1 - . ID=LTnewLM_160012400 LTnewLM_16 AUGUSTUS mRNA 235952 237295 1 - . ID=LTnewLM_160012400.1;Parent=LTnewLM_160012400 LTnewLM_16 AUGUSTUS CDS 235952 237295 1 - 0 ID=LTnewLM_160012400.1:CDS:1;Parent=LTnewLM_160012400.1 ### LTnewLM_16 . polypeptide 235952 237295 . - . ID=LTnewLM_160012400.1:pep;Derives_from=LTnewLM_160012400.1;orthologous_to=LmjF.16.0680_mRNA;ortholog_cluster=OG0001367;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_16 Pfam protein_match 235988 236896 . - . Parent=LTnewLM_160012400.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_16 AUGUSTUS gene 238287 239942 1 - . ID=LTnewLM_160012500 LTnewLM_16 AUGUSTUS mRNA 238287 239942 1 - . ID=LTnewLM_160012500.1;Parent=LTnewLM_160012500 LTnewLM_16 AUGUSTUS CDS 238287 239942 1 - 0 ID=LTnewLM_160012500.1:CDS:1;Parent=LTnewLM_160012500.1 ### LTnewLM_16 . polypeptide 238287 239942 . - . ID=LTnewLM_160012500.1:pep;Derives_from=LTnewLM_160012500.1;orthologous_to=LmjF.16.0690_mRNA;ortholog_cluster=OG0001368;product=term%3DEukaryotic translation initiation factor eIF2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08662 LTnewLM_16 Pfam protein_match 238518 239147 . - . Parent=LTnewLM_160012500.1:pep;Name=PF08662;signature_desc=Eukaryotic translation initiation factor eIF2A ### LTnewLM_16 AUGUSTUS gene 240748 243297 1 - . ID=LTnewLM_160012600 LTnewLM_16 AUGUSTUS mRNA 240748 243297 1 - . ID=LTnewLM_160012600.1;Parent=LTnewLM_160012600 LTnewLM_16 AUGUSTUS CDS 240748 243297 1 - 0 ID=LTnewLM_160012600.1:CDS:1;Parent=LTnewLM_160012600.1 ### LTnewLM_16 . polypeptide 240748 243297 . - . ID=LTnewLM_160012600.1:pep;Derives_from=LTnewLM_160012600.1;orthologous_to=LmjF.16.0700_mRNA;ortholog_cluster=OG0001369;product=term%3DLysM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01476 LTnewLM_16 Pfam protein_match 240952 241041 . - . Parent=LTnewLM_160012600.1:pep;Name=PF01476;signature_desc=LysM domain LTnewLM_16 Pfam protein_match 242920 243039 . - . Parent=LTnewLM_160012600.1:pep;Name=PF01476;signature_desc=LysM domain ### LTnewLM_16 AUGUSTUS gene 244882 247869 1 - . ID=LTnewLM_160012700 LTnewLM_16 AUGUSTUS mRNA 244882 247869 1 - . ID=LTnewLM_160012700.1;Parent=LTnewLM_160012700 LTnewLM_16 AUGUSTUS CDS 244882 247869 1 - 0 ID=LTnewLM_160012700.1:CDS:1;Parent=LTnewLM_160012700.1 ### LTnewLM_16 . polypeptide 244882 247869 . - . ID=LTnewLM_160012700.1:pep;Derives_from=LTnewLM_160012700.1;orthologous_to=LmjF.16.0710_mRNA;ortholog_cluster=OG0001370;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 248508 250142 0.92 - . ID=LTnewLM_160012800 LTnewLM_16 AUGUSTUS mRNA 248508 250142 0.92 - . ID=LTnewLM_160012800.1;Parent=LTnewLM_160012800 LTnewLM_16 AUGUSTUS CDS 248508 250060 0.92 - 2 ID=LTnewLM_160012800.1:CDS:1;Parent=LTnewLM_160012800.1 LTnewLM_16 AUGUSTUS CDS 250139 250142 1 - 0 ID=LTnewLM_160012800.1:CDS:2;Parent=LTnewLM_160012800.1 ### LTnewLM_16 . polypeptide 248508 250142 . - . ID=LTnewLM_160012800.1:pep;Derives_from=LTnewLM_160012800.1;orthologous_to=LmjF.16.0720_mRNA;ortholog_cluster=OG0001371;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_16 Pfam protein_match 249690 249746 . - . Parent=LTnewLM_160012800.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_16 AUGUSTUS gene 250984 256671 1 - . ID=LTnewLM_160012900 LTnewLM_16 AUGUSTUS mRNA 250984 256671 1 - . ID=LTnewLM_160012900.1;Parent=LTnewLM_160012900 LTnewLM_16 AUGUSTUS CDS 250984 256671 1 - 0 ID=LTnewLM_160012900.1:CDS:1;Parent=LTnewLM_160012900.1 ### LTnewLM_16 . polypeptide 250984 256671 . - . ID=LTnewLM_160012900.1:pep;Derives_from=LTnewLM_160012900.1;orthologous_to=LmjF.16.0730_mRNA;ortholog_cluster=OG0001372;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443|Pfam:PF13423;Ontology_term=GO:0006511,GO:0036459 LTnewLM_16 Pfam protein_match 254899 255894 . - . Parent=LTnewLM_160012900.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_16 Pfam protein_match 254962 255606 . - . Parent=LTnewLM_160012900.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_16 AUGUSTUS gene 258115 260337 1 - . ID=LTnewLM_160013000 LTnewLM_16 AUGUSTUS mRNA 258115 260337 1 - . ID=LTnewLM_160013000.1;Parent=LTnewLM_160013000 LTnewLM_16 AUGUSTUS CDS 258115 260337 1 - 0 ID=LTnewLM_160013000.1:CDS:1;Parent=LTnewLM_160013000.1 ### LTnewLM_16 . polypeptide 258115 260337 . - . ID=LTnewLM_160013000.1:pep;Derives_from=LTnewLM_160013000.1;orthologous_to=LmjF.16.0740_mRNA;ortholog_cluster=OG0001373;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 261078 262877 1 - . ID=LTnewLM_160013100 LTnewLM_16 AUGUSTUS mRNA 261078 262877 1 - . ID=LTnewLM_160013100.1;Parent=LTnewLM_160013100 LTnewLM_16 AUGUSTUS CDS 261078 262877 1 - 0 ID=LTnewLM_160013100.1:CDS:1;Parent=LTnewLM_160013100.1 ### LTnewLM_16 . polypeptide 261078 262877 . - . ID=LTnewLM_160013100.1:pep;Derives_from=LTnewLM_160013100.1;orthologous_to=LmjF.16.0750_mRNA;ortholog_cluster=OG0001374;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 265719 266711 1 - . ID=LTnewLM_160013200 LTnewLM_16 AUGUSTUS mRNA 265719 266711 1 - . ID=LTnewLM_160013200.1;Parent=LTnewLM_160013200 LTnewLM_16 AUGUSTUS CDS 265719 266711 1 - 0 ID=LTnewLM_160013200.1:CDS:1;Parent=LTnewLM_160013200.1 ### LTnewLM_16 . polypeptide 265719 266711 . - . ID=LTnewLM_160013200.1:pep;Derives_from=LTnewLM_160013200.1;orthologous_to=LmjF.16.0760_mRNA;ortholog_cluster=OG0001375;product=term%3DTransaldolase/Fructose-6-phosphate aldolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00923;Ontology_term=GO:0005975 LTnewLM_16 Pfam protein_match 265737 266672 . - . Parent=LTnewLM_160013200.1:pep;Name=PF00923;signature_desc=Transaldolase/Fructose-6-phosphate aldolase;Ontology_term=GO:0005975 ### LTnewLM_16 AUGUSTUS gene 269051 269503 0.77 - . ID=LTnewLM_160013300 LTnewLM_16 AUGUSTUS mRNA 269051 269503 0.77 - . ID=LTnewLM_160013300.1;Parent=LTnewLM_160013300 LTnewLM_16 AUGUSTUS CDS 269051 269098 1 - 0 ID=LTnewLM_160013300.1:CDS:1;Parent=LTnewLM_160013300.1 LTnewLM_16 AUGUSTUS CDS 269180 269503 0.77 - 0 ID=LTnewLM_160013300.1:CDS:2;Parent=LTnewLM_160013300.1 ### LTnewLM_16 . polypeptide 269051 269503 . - . ID=LTnewLM_160013300.1:pep;Derives_from=LTnewLM_160013300.1;product=term%3Dhypothetical protein ### LTnewLM_16 . pseudogene 269635 271366 2.8e+03 - . ID=LTnewLM_160013400:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.16.0770:mRNA 39 615;original_prot_length=615 LTnewLM_16 . pseudogenic_transcript 269635 271366 . - . ID=LTnewLM_160013400.1;Parent=LTnewLM_160013400:pseudogene LTnewLM_16 . pseudogenic_exon 269635 269661 . - . ID=LTnewLM_160013400.1:pseudogenic_exon:1;Parent=LTnewLM_160013400.1 LTnewLM_16 . pseudogenic_exon 269663 271366 . - . ID=LTnewLM_160013400.1:pseudogenic_exon:2;Parent=LTnewLM_160013400.1 ### LTnewLM_16 . polypeptide 269635 271366 . - . ID=LTnewLM_160013400.1:pep;Derives_from=LTnewLM_160013400.1;orthologous_to=LmjF.16.0770_mRNA;ortholog_cluster=OG0007471;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 274678 277665 . - . ID=LTnewLM_160013500.1:pep;Derives_from=LTnewLM_160013500.1;orthologous_to=LTnewLM_160013500.2,LTnewLM_160013500.3,LmjF.16.0780_mRNA;ortholog_cluster=OG0000129;product=term%3DVacuolar-sorting-associated 13 protein C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16909 LTnewLM_16 Pfam protein_match 276478 276960 . - . Parent=LTnewLM_160013500.1:pep;Name=PF16909;signature_desc=Vacuolar-sorting-associated 13 protein C-terminal ### LTnewLM_16 . polypeptide 274678 279465 . - . ID=LTnewLM_160013500.2:pep;Derives_from=LTnewLM_160013500.2;orthologous_to=LTnewLM_160013500.1,LTnewLM_160013500.3,LmjF.16.0780_mRNA;ortholog_cluster=OG0000129;product=term%3DVacuolar-sorting-associated 13 protein C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16909 LTnewLM_16 Pfam protein_match 276478 276960 . - . Parent=LTnewLM_160013500.2:pep;Name=PF16909;signature_desc=Vacuolar-sorting-associated 13 protein C-terminal ### LTnewLM_16 AUGUSTUS gene 274678 291606 2.1 - . ID=LTnewLM_160013500 LTnewLM_16 AUGUSTUS mRNA 274678 277665 0.92 - . ID=LTnewLM_160013500.1;Parent=LTnewLM_160013500 LTnewLM_16 AUGUSTUS CDS 274678 277665 0.92 - 0 ID=LTnewLM_160013500.1:CDS:1;Parent=LTnewLM_160013500.1 LTnewLM_16 AUGUSTUS mRNA 274678 279465 1 - . ID=LTnewLM_160013500.2;Parent=LTnewLM_160013500 LTnewLM_16 AUGUSTUS CDS 274678 279465 1 - 0 ID=LTnewLM_160013500.2:CDS:1;Parent=LTnewLM_160013500.2 LTnewLM_16 AUGUSTUS mRNA 274678 291606 0.18 - . ID=LTnewLM_160013500.3;Parent=LTnewLM_160013500 LTnewLM_16 AUGUSTUS CDS 274678 285529 0.27 - 1 ID=LTnewLM_160013500.3:CDS:1;Parent=LTnewLM_160013500.3 LTnewLM_16 AUGUSTUS CDS 285605 291606 0.18 - 0 ID=LTnewLM_160013500.3:CDS:2;Parent=LTnewLM_160013500.3 ### LTnewLM_16 . polypeptide 274678 291606 . - . ID=LTnewLM_160013500.3:pep;Derives_from=LTnewLM_160013500.3;orthologous_to=LTnewLM_160013500.1,LTnewLM_160013500.2,LmjF.16.0780_mRNA;ortholog_cluster=OG0000129;product=term%3DN-terminal region of Chorein or VPS13/Vacuolar sorting-associated protein 13%2C N-terminal/Repeating coiled region of VPS13/Vacuolar-sorting-associated 13 protein C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12624|Pfam:PF16908|Pfam:PF16910|Pfam:PF16909 LTnewLM_16 Pfam protein_match 276553 277035 . - . Parent=LTnewLM_160013500.3:pep;Name=PF16909;signature_desc=Vacuolar-sorting-associated 13 protein C-terminal LTnewLM_16 Pfam protein_match 288943 289290 . - . Parent=LTnewLM_160013500.3:pep;Name=PF16910;signature_desc=Repeating coiled region of VPS13 LTnewLM_16 Pfam protein_match 290329 291009 . - . Parent=LTnewLM_160013500.3:pep;Name=PF16908;signature_desc=Vacuolar sorting-associated protein 13%2C N-terminal LTnewLM_16 Pfam protein_match 291460 291603 . - . Parent=LTnewLM_160013500.3:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 ### LTnewLM_16 AUGUSTUS gene 293745 295118 1 - . ID=LTnewLM_160013600 LTnewLM_16 AUGUSTUS mRNA 293745 295118 1 - . ID=LTnewLM_160013600.1;Parent=LTnewLM_160013600 LTnewLM_16 AUGUSTUS CDS 293745 295118 1 - 0 ID=LTnewLM_160013600.1:CDS:1;Parent=LTnewLM_160013600.1 ### LTnewLM_16 . polypeptide 293745 295118 . - . ID=LTnewLM_160013600.1:pep;Derives_from=LTnewLM_160013600.1;orthologous_to=LmjF.16.0790_mRNA;ortholog_cluster=OG0001376;product=term%3DGlycosyl hydrolases family 18%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00704;Ontology_term=GO:0004553,GO:0005975 LTnewLM_16 Pfam protein_match 293934 294938 . - . Parent=LTnewLM_160013600.1:pep;Name=PF00704;signature_desc=Glycosyl hydrolases family 18;Ontology_term=GO:0004553,GO:0005975 ### LTnewLM_16 AUGUSTUS gene 296282 298531 1 - . ID=LTnewLM_160013700 LTnewLM_16 AUGUSTUS mRNA 296282 298531 1 - . ID=LTnewLM_160013700.1;Parent=LTnewLM_160013700 LTnewLM_16 AUGUSTUS CDS 296282 298531 1 - 0 ID=LTnewLM_160013700.1:CDS:1;Parent=LTnewLM_160013700.1 ### LTnewLM_16 . polypeptide 296282 298531 . - . ID=LTnewLM_160013700.1:pep;Derives_from=LTnewLM_160013700.1;orthologous_to=LmjF.16.0800_mRNA;ortholog_cluster=OG0001377;product=term%3DMembrane transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03547;Ontology_term=GO:0016021,GO:0055085 LTnewLM_16 Pfam protein_match 296924 297664 . - . Parent=LTnewLM_160013700.1:pep;Name=PF03547;signature_desc=Membrane transport protein;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_16 AUGUSTUS gene 299902 301707 1 - . ID=LTnewLM_160013800 LTnewLM_16 AUGUSTUS mRNA 299902 301707 1 - . ID=LTnewLM_160013800.1;Parent=LTnewLM_160013800 LTnewLM_16 AUGUSTUS CDS 299902 301707 1 - 0 ID=LTnewLM_160013800.1:CDS:1;Parent=LTnewLM_160013800.1 ### LTnewLM_16 . polypeptide 299902 301707 . - . ID=LTnewLM_160013800.1:pep;Derives_from=LTnewLM_160013800.1;orthologous_to=LmjF.16.0810_mRNA;ortholog_cluster=OG0001378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 Liftoff gene 302508 304541 . - . ID=LTnewLM_160013900;coverage=1.0;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.16.0820_0 LTnewLM_16 Liftoff mRNA 302508 304541 . - . ID=LTnewLM_160013900.1;Parent=LTnewLM_160013900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 302508 304541 . - 0 ID=LTnewLM_160013900.1:CDS:1;Parent=LTnewLM_160013900.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 302508 304541 . - . ID=LTnewLM_160013900.1:pep;Derives_from=LTnewLM_160013900.1;orthologous_to=LmjF.16.0820_mRNA;ortholog_cluster=OG0001379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 305790 306707 1 - . ID=LTnewLM_160014000 LTnewLM_16 AUGUSTUS mRNA 305790 306707 1 - . ID=LTnewLM_160014000.1;Parent=LTnewLM_160014000 LTnewLM_16 AUGUSTUS CDS 305790 306707 1 - 0 ID=LTnewLM_160014000.1:CDS:1;Parent=LTnewLM_160014000.1 ### LTnewLM_16 . polypeptide 305790 306707 . - . ID=LTnewLM_160014000.1:pep;Derives_from=LTnewLM_160014000.1;orthologous_to=LmjF.16.0830_mRNA;ortholog_cluster=OG0001380;product=term%3DIron-sulphur cluster biosynthesis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01521 LTnewLM_16 Pfam protein_match 305835 306122 . - . Parent=LTnewLM_160014000.1:pep;Name=PF01521;signature_desc=Iron-sulphur cluster biosynthesis ### LTnewLM_16 AUGUSTUS gene 307980 310385 1 - . ID=LTnewLM_160014100 LTnewLM_16 AUGUSTUS mRNA 307980 310385 1 - . ID=LTnewLM_160014100.1;Parent=LTnewLM_160014100 LTnewLM_16 AUGUSTUS CDS 307980 310385 1 - 0 ID=LTnewLM_160014100.1:CDS:1;Parent=LTnewLM_160014100.1 ### LTnewLM_16 . polypeptide 307980 310385 . - . ID=LTnewLM_160014100.1:pep;Derives_from=LTnewLM_160014100.1;orthologous_to=LmjF.16.0840_mRNA;ortholog_cluster=OG0001381;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 311361 312785 1 - . ID=LTnewLM_160014200 LTnewLM_16 AUGUSTUS mRNA 311361 312785 1 - . ID=LTnewLM_160014200.1;Parent=LTnewLM_160014200 LTnewLM_16 AUGUSTUS CDS 311361 312785 1 - 0 ID=LTnewLM_160014200.1:CDS:1;Parent=LTnewLM_160014200.1 ### LTnewLM_16 . polypeptide 311361 312785 . - . ID=LTnewLM_160014200.1:pep;Derives_from=LTnewLM_160014200.1;orthologous_to=LmjF.16.0850_mRNA;ortholog_cluster=OG0001382;product=term%3DJAB1/Mov34/MPN/PAD-1 ubiquitin protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01398;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 312225 312581 . - . Parent=LTnewLM_160014200.1:pep;Name=PF01398;signature_desc=JAB1/Mov34/MPN/PAD-1 ubiquitin protease;Ontology_term=GO:0005515 ### LTnewLM_16 AUGUSTUS gene 313802 314488 1 - . ID=LTnewLM_160014300 LTnewLM_16 AUGUSTUS mRNA 313802 314488 1 - . ID=LTnewLM_160014300.1;Parent=LTnewLM_160014300 LTnewLM_16 AUGUSTUS CDS 313802 314488 1 - 0 ID=LTnewLM_160014300.1:CDS:1;Parent=LTnewLM_160014300.1 ### LTnewLM_16 . polypeptide 313802 314488 . - . ID=LTnewLM_160014300.1:pep;Derives_from=LTnewLM_160014300.1;orthologous_to=LmjF.16.0860_mRNA;ortholog_cluster=OG0001383;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 315829 317883 1 - . ID=LTnewLM_160014400 LTnewLM_16 AUGUSTUS mRNA 315829 317883 1 - . ID=LTnewLM_160014400.1;Parent=LTnewLM_160014400 LTnewLM_16 AUGUSTUS CDS 315829 317883 1 - 0 ID=LTnewLM_160014400.1:CDS:1;Parent=LTnewLM_160014400.1 ### LTnewLM_16 . polypeptide 315829 317883 . - . ID=LTnewLM_160014400.1:pep;Derives_from=LTnewLM_160014400.1;orthologous_to=LmjF.16.0870_mRNA;ortholog_cluster=OG0001384;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_16 Pfam protein_match 315886 316713 . - . Parent=LTnewLM_160014400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_16 Pfam protein_match 316120 316716 . - . Parent=LTnewLM_160014400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_16 . pseudogene 318981 319911 . - . ID=LTnewLM_160014500:pseudogene;coverage=0.995;sequence_ID=0.911;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.0880_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 318981 319911 . - . ID=LTnewLM_160014500.1;Parent=LTnewLM_160014500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 318981 319911 . - . ID=LTnewLM_160014500.1:pseudogenic_exon:1;Parent=LTnewLM_160014500.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 318981 319911 . - . ID=LTnewLM_160014500.1:pep;Derives_from=LTnewLM_160014500.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 321419 323407 1 - . ID=LTnewLM_160014600 LTnewLM_16 AUGUSTUS mRNA 321419 323407 1 - . ID=LTnewLM_160014600.1;Parent=LTnewLM_160014600 LTnewLM_16 AUGUSTUS CDS 321419 323407 1 - 0 ID=LTnewLM_160014600.1:CDS:1;Parent=LTnewLM_160014600.1 ### LTnewLM_16 . polypeptide 321419 323407 . - . ID=LTnewLM_160014600.1:pep;Derives_from=LTnewLM_160014600.1;orthologous_to=LmjF.16.0890_mRNA;ortholog_cluster=OG0001385;product=term%3DNucleolar protein%2CNop52%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05997;Ontology_term=GO:0006364,GO:0030688 LTnewLM_16 Pfam protein_match 322544 322801 . - . Parent=LTnewLM_160014600.1:pep;Name=PF05997;signature_desc=Nucleolar protein%2CNop52;Ontology_term=GO:0006364,GO:0030688 ### LTnewLM_16 AUGUSTUS gene 324508 325401 1 - . ID=LTnewLM_160014700 LTnewLM_16 AUGUSTUS mRNA 324508 325401 1 - . ID=LTnewLM_160014700.1;Parent=LTnewLM_160014700 LTnewLM_16 AUGUSTUS CDS 324508 325401 1 - 0 ID=LTnewLM_160014700.1:CDS:1;Parent=LTnewLM_160014700.1 ### LTnewLM_16 . polypeptide 324508 325401 . - . ID=LTnewLM_160014700.1:pep;Derives_from=LTnewLM_160014700.1;orthologous_to=LmjF.16.0895_mRNA;ortholog_cluster=OG0001386;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 326337 331304 1 - . ID=LTnewLM_160014800 LTnewLM_16 AUGUSTUS mRNA 326337 331304 1 - . ID=LTnewLM_160014800.1;Parent=LTnewLM_160014800 LTnewLM_16 AUGUSTUS CDS 326337 331304 1 - 0 ID=LTnewLM_160014800.1:CDS:1;Parent=LTnewLM_160014800.1 ### LTnewLM_16 . polypeptide 326337 331304 . - . ID=LTnewLM_160014800.1:pep;Derives_from=LTnewLM_160014800.1;orthologous_to=LmjF.16.0900_mRNA;ortholog_cluster=OG0001387;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 332574 332879 1 - . ID=LTnewLM_160014900 LTnewLM_16 AUGUSTUS mRNA 332574 332879 1 - . ID=LTnewLM_160014900.1;Parent=LTnewLM_160014900 LTnewLM_16 AUGUSTUS CDS 332574 332879 1 - 0 ID=LTnewLM_160014900.1:CDS:1;Parent=LTnewLM_160014900.1 ### LTnewLM_16 . polypeptide 332574 332879 . - . ID=LTnewLM_160014900.1:pep;Derives_from=LTnewLM_160014900.1;orthologous_to=LTnewLM_160015000.1;ortholog_cluster=OG0001388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 334123 334734 1 - . ID=LTnewLM_160015000 LTnewLM_16 AUGUSTUS mRNA 334123 334734 1 - . ID=LTnewLM_160015000.1;Parent=LTnewLM_160015000 LTnewLM_16 AUGUSTUS CDS 334123 334734 1 - 0 ID=LTnewLM_160015000.1:CDS:1;Parent=LTnewLM_160015000.1 ### LTnewLM_16 . polypeptide 334123 334734 . - . ID=LTnewLM_160015000.1:pep;Derives_from=LTnewLM_160015000.1;orthologous_to=LTnewLM_160014900.1;ortholog_cluster=OG0001388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 340407 341069 1 + . ID=LTnewLM_160015100 LTnewLM_16 AUGUSTUS mRNA 340407 341069 1 + . ID=LTnewLM_160015100.1;Parent=LTnewLM_160015100 LTnewLM_16 AUGUSTUS CDS 340407 341069 1 + 0 ID=LTnewLM_160015100.1:CDS:1;Parent=LTnewLM_160015100.1 ### LTnewLM_16 . polypeptide 340407 341069 . + . ID=LTnewLM_160015100.1:pep;Derives_from=LTnewLM_160015100.1;orthologous_to=LmjF.16.0930_mRNA;ortholog_cluster=OG0001389;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_16 Pfam protein_match 340488 340928 . + . Parent=LTnewLM_160015100.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_16 AUGUSTUS gene 341341 341679 1 + . ID=LTnewLM_160015200 LTnewLM_16 AUGUSTUS mRNA 341341 341679 1 + . ID=LTnewLM_160015200.1;Parent=LTnewLM_160015200 LTnewLM_16 AUGUSTUS CDS 341341 341679 1 + 0 ID=LTnewLM_160015200.1:CDS:1;Parent=LTnewLM_160015200.1 ### LTnewLM_16 . polypeptide 341341 341679 . + . ID=LTnewLM_160015200.1:pep;Derives_from=LTnewLM_160015200.1;orthologous_to=LmjF.16.0940_mRNA;ortholog_cluster=OG0001390;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_16 Pfam protein_match 341428 341667 . + . Parent=LTnewLM_160015200.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_16 AUGUSTUS gene 341997 343391 1 + . ID=LTnewLM_160015300 LTnewLM_16 AUGUSTUS mRNA 341997 343391 1 + . ID=LTnewLM_160015300.1;Parent=LTnewLM_160015300 LTnewLM_16 AUGUSTUS CDS 341997 343391 1 + 0 ID=LTnewLM_160015300.1:CDS:1;Parent=LTnewLM_160015300.1 ### LTnewLM_16 . polypeptide 341997 343391 . + . ID=LTnewLM_160015300.1:pep;Derives_from=LTnewLM_160015300.1;orthologous_to=LmjF.16.0950_mRNA;ortholog_cluster=OG0001391;product=term%3DGlycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00534|Pfam:PF13692;Ontology_term=GO:0009058 LTnewLM_16 Pfam protein_match 342819 343286 . + . Parent=LTnewLM_160015300.1:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_16 Pfam protein_match 342837 343253 . + . Parent=LTnewLM_160015300.1:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_16 AUGUSTUS gene 343958 345424 1 + . ID=LTnewLM_160015400 LTnewLM_16 AUGUSTUS mRNA 343958 345424 1 + . ID=LTnewLM_160015400.1;Parent=LTnewLM_160015400 LTnewLM_16 AUGUSTUS CDS 343958 345424 1 + 0 ID=LTnewLM_160015400.1:CDS:1;Parent=LTnewLM_160015400.1 ### LTnewLM_16 . polypeptide 343958 345424 . + . ID=LTnewLM_160015400.1:pep;Derives_from=LTnewLM_160015400.1;orthologous_to=LmjF.16.0960_mRNA;ortholog_cluster=OG0001392;product=term%3DMethyltransferase domain/ubiE/COQ5 methyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08241|Pfam:PF13649|Pfam:PF13489|Pfam:PF01209;Ontology_term=GO:0008152,GO:0008168 LTnewLM_16 Pfam protein_match 344990 345157 . + . Parent=LTnewLM_160015400.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_16 Pfam protein_match 345005 345148 . + . Parent=LTnewLM_160015400.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_16 Pfam protein_match 345020 345295 . + . Parent=LTnewLM_160015400.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_16 Pfam protein_match 345026 345217 . + . Parent=LTnewLM_160015400.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 ### LTnewLM_16 AUGUSTUS gene 346137 348422 1 + . ID=LTnewLM_160015500 LTnewLM_16 AUGUSTUS mRNA 346137 348422 1 + . ID=LTnewLM_160015500.1;Parent=LTnewLM_160015500 LTnewLM_16 AUGUSTUS CDS 346137 348422 1 + 0 ID=LTnewLM_160015500.1:CDS:1;Parent=LTnewLM_160015500.1 ### LTnewLM_16 . polypeptide 346137 348422 . + . ID=LTnewLM_160015500.1:pep;Derives_from=LTnewLM_160015500.1;orthologous_to=LmjF.16.0970_mRNA;ortholog_cluster=OG0001393;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 352265 355741 1 + . ID=LTnewLM_160015600 LTnewLM_16 AUGUSTUS mRNA 352265 355741 1 + . ID=LTnewLM_160015600.1;Parent=LTnewLM_160015600 LTnewLM_16 AUGUSTUS CDS 352265 355741 1 + 0 ID=LTnewLM_160015600.1:CDS:1;Parent=LTnewLM_160015600.1 ### LTnewLM_16 . polypeptide 352265 355741 . + . ID=LTnewLM_160015600.1:pep;Derives_from=LTnewLM_160015600.1;orthologous_to=LmjF.16.0980_mRNA;ortholog_cluster=OG0001394;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 358913 360334 1 + . ID=LTnewLM_160015700 LTnewLM_16 AUGUSTUS mRNA 358913 360334 1 + . ID=LTnewLM_160015700.1;Parent=LTnewLM_160015700 LTnewLM_16 AUGUSTUS CDS 358913 360334 1 + 0 ID=LTnewLM_160015700.1:CDS:1;Parent=LTnewLM_160015700.1 ### LTnewLM_16 . polypeptide 358913 360334 . + . ID=LTnewLM_160015700.1:pep;Derives_from=LTnewLM_160015700.1;orthologous_to=LmjF.16.0990_mRNA;ortholog_cluster=OG0001395;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_16 Pfam protein_match 358931 359338 . + . Parent=LTnewLM_160015700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_16 Pfam protein_match 358943 359329 . + . Parent=LTnewLM_160015700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_16 Pfam protein_match 359552 359734 . + . Parent=LTnewLM_160015700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_16 Pfam protein_match 359561 360244 . + . Parent=LTnewLM_160015700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_16 . pseudogene 362825 365199 2.53e+03 + . ID=LTnewLM_160015800:pseudogene;has_internal_stop=false;has_frameshift=true;has_stop=true;Target=LmjF.16.1050:mRNA 166 1025;original_prot_length=1025 LTnewLM_16 . pseudogenic_transcript 362825 365199 . + . ID=LTnewLM_160015800.1;Parent=LTnewLM_160015800:pseudogene LTnewLM_16 . pseudogenic_exon 362825 362923 . + . ID=LTnewLM_160015800.1:pseudogenic_exon:1;Parent=LTnewLM_160015800.1 LTnewLM_16 . pseudogenic_exon 362925 363128 . + . ID=LTnewLM_160015800.1:pseudogenic_exon:2;Parent=LTnewLM_160015800.1 LTnewLM_16 . pseudogenic_exon 363130 363210 . + . ID=LTnewLM_160015800.1:pseudogenic_exon:3;Parent=LTnewLM_160015800.1 LTnewLM_16 . pseudogenic_exon 363212 364285 . + . ID=LTnewLM_160015800.1:pseudogenic_exon:4;Parent=LTnewLM_160015800.1 LTnewLM_16 . pseudogenic_exon 364291 365199 . + . ID=LTnewLM_160015800.1:pseudogenic_exon:5;Parent=LTnewLM_160015800.1 ### LTnewLM_16 . polypeptide 362825 365199 . + . ID=LTnewLM_160015800.1:pep;Derives_from=LTnewLM_160015800.1;orthologous_to=LTnewLM_160016100.1,LTnewLM_160016200.1;ortholog_cluster=OG0000348;product=term%3DStealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17102 LTnewLM_16 Pfam protein_match 363944 364090 . + . Parent=LTnewLM_160015800.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 ### LTnewLM_16 . pseudogene 370079 373190 . + . ID=LTnewLM_160015900:pseudogene;coverage=0.996;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1005_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 370079 373190 . + . ID=LTnewLM_160015900.1;Parent=LTnewLM_160015900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 370079 373190 . + . ID=LTnewLM_160015900.1:pseudogenic_exon:1;Parent=LTnewLM_160015900.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 370079 373190 . + . ID=LTnewLM_160015900.1:pep;Derives_from=LTnewLM_160015900.1;orthologous_to=LTnewLM_160016000.1;ortholog_cluster=OG0007472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . pseudogene 374255 377177 . + . ID=LTnewLM_160016000:pseudogene;coverage=1.0;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1010_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 374255 377177 . + . ID=LTnewLM_160016000.1;Parent=LTnewLM_160016000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 374255 377177 . + . ID=LTnewLM_160016000.1:pseudogenic_exon:1;Parent=LTnewLM_160016000.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 374255 377177 . + . ID=LTnewLM_160016000.1:pep;Derives_from=LTnewLM_160016000.1;orthologous_to=LTnewLM_160015900.1;ortholog_cluster=OG0007472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 379275 382096 1 + . ID=LTnewLM_160016100 LTnewLM_16 AUGUSTUS mRNA 379275 382096 1 + . ID=LTnewLM_160016100.1;Parent=LTnewLM_160016100 LTnewLM_16 AUGUSTUS CDS 379275 381335 1 + 0 ID=LTnewLM_160016100.1:CDS:1;Parent=LTnewLM_160016100.1 LTnewLM_16 AUGUSTUS CDS 381386 382096 1 + 0 ID=LTnewLM_160016100.1:CDS:2;Parent=LTnewLM_160016100.1 ### LTnewLM_16 . polypeptide 379275 382096 . + . ID=LTnewLM_160016100.1:pep;Derives_from=LTnewLM_160016100.1;orthologous_to=LTnewLM_160015800.1,LTnewLM_160016200.1;ortholog_cluster=OG0000348;product=term%3DStealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17102 LTnewLM_16 Pfam protein_match 380850 380996 . + . Parent=LTnewLM_160016100.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 ### LTnewLM_16 AUGUSTUS gene 388109 390844 1 + . ID=LTnewLM_160016200 LTnewLM_16 AUGUSTUS mRNA 388109 390844 1 + . ID=LTnewLM_160016200.1;Parent=LTnewLM_160016200 LTnewLM_16 AUGUSTUS CDS 388109 390082 1 + 0 ID=LTnewLM_160016200.1:CDS:1;Parent=LTnewLM_160016200.1 LTnewLM_16 AUGUSTUS CDS 390134 390844 1 + 0 ID=LTnewLM_160016200.1:CDS:2;Parent=LTnewLM_160016200.1 ### LTnewLM_16 . polypeptide 388109 390844 . + . ID=LTnewLM_160016200.1:pep;Derives_from=LTnewLM_160016200.1;orthologous_to=LTnewLM_160015800.1,LTnewLM_160016100.1;ortholog_cluster=OG0000348;product=term%3DStealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17102 LTnewLM_16 Pfam protein_match 389597 389743 . + . Parent=LTnewLM_160016200.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 ### LTnewLM_16 Liftoff gene 394630 397758 . + . ID=LTnewLM_160016300;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1050_0 LTnewLM_16 Liftoff mRNA 394630 397758 . + . ID=LTnewLM_160016300.1;Parent=LTnewLM_160016300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 394630 397758 . + 0 ID=LTnewLM_160016300.1:CDS:1;Parent=LTnewLM_160016300.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 394630 397758 . + . ID=LTnewLM_160016300.1:pep;Derives_from=LTnewLM_160016300.1;orthologous_to=LmjF.16.1050_mRNA;ortholog_cluster=OG0001396;product=term%3DStealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17102 LTnewLM_16 Pfam protein_match 396424 396570 . + . Parent=LTnewLM_160016300.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 ### LTnewLM_16 AUGUSTUS gene 399167 402103 1 + . ID=LTnewLM_160016400 LTnewLM_16 AUGUSTUS mRNA 399167 402103 1 + . ID=LTnewLM_160016400.1;Parent=LTnewLM_160016400 LTnewLM_16 AUGUSTUS CDS 399167 402103 1 + 0 ID=LTnewLM_160016400.1:CDS:1;Parent=LTnewLM_160016400.1 ### LTnewLM_16 . polypeptide 399167 402103 . + . ID=LTnewLM_160016400.1:pep;Derives_from=LTnewLM_160016400.1;orthologous_to=LmjF.16.1060_mRNA;ortholog_cluster=OG0001397;product=term%3DStealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17102 LTnewLM_16 Pfam protein_match 400757 400903 . + . Parent=LTnewLM_160016400.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 ### LTnewLM_16 AUGUSTUS gene 403116 403463 1 + . ID=LTnewLM_160016500 LTnewLM_16 AUGUSTUS mRNA 403116 403463 1 + . ID=LTnewLM_160016500.1;Parent=LTnewLM_160016500 LTnewLM_16 AUGUSTUS CDS 403116 403463 1 + 0 ID=LTnewLM_160016500.1:CDS:1;Parent=LTnewLM_160016500.1 ### LTnewLM_16 . polypeptide 403116 403463 . + . ID=LTnewLM_160016500.1:pep;Derives_from=LTnewLM_160016500.1;orthologous_to=LmjF.16.1065_mRNA;ortholog_cluster=OG0001398;product=term%3DUbiquitin fold modifier 1 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03671 LTnewLM_16 Pfam protein_match 403164 403388 . + . Parent=LTnewLM_160016500.1:pep;Name=PF03671;signature_desc=Ubiquitin fold modifier 1 protein ### LTnewLM_16 AUGUSTUS gene 404414 405964 1 + . ID=LTnewLM_160016600 LTnewLM_16 AUGUSTUS mRNA 404414 405964 1 + . ID=LTnewLM_160016600.1;Parent=LTnewLM_160016600 LTnewLM_16 AUGUSTUS CDS 404414 405964 1 + 0 ID=LTnewLM_160016600.1:CDS:1;Parent=LTnewLM_160016600.1 ### LTnewLM_16 . polypeptide 404414 405964 . + . ID=LTnewLM_160016600.1:pep;Derives_from=LTnewLM_160016600.1;orthologous_to=LmjF.16.1070_mRNA;ortholog_cluster=OG0001399;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 Liftoff gene 409837 411862 . + . ID=LTnewLM_160016700;coverage=0.998;sequence_ID=0.920;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.16.1080_0 LTnewLM_16 Liftoff mRNA 409837 411862 . + . ID=LTnewLM_160016700.1;Parent=LTnewLM_160016700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_16 Liftoff five_prime_UTR 409837 409942 . + . ID=LTnewLM_160016700:five_prime_UTR;Parent=LTnewLM_160016700.1;extra_copy_number=0 LTnewLM_16 Liftoff CDS 409943 411862 . + 0 ID=LTnewLM_160016700.1:CDS:1;Parent=LTnewLM_160016700.1;extra_copy_number=0 LTnewLM_16 Liftoff mRNA 409998 411862 . + . ID=LTnewLM_160016700.2;Parent=LTnewLM_160016700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_16 Liftoff five_prime_UTR 409998 410020 . + . ID=LTnewLM_160016700:five_prime_UTR.1;Parent=LTnewLM_160016700.2;extra_copy_number=0 LTnewLM_16 Liftoff CDS 410021 411862 . + 0 ID=LTnewLM_160016700.2:CDS:1;Parent=LTnewLM_160016700.2;extra_copy_number=0 ### LTnewLM_16 . polypeptide 409943 411862 . + . ID=LTnewLM_160016700.1:pep;Derives_from=LTnewLM_160016700.1;orthologous_to=LTnewLM_160016700.2,LmjF.16.1080.1_mRNA,LmjF.16.1080.2_mRNA;ortholog_cluster=OG0000130;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 410021 411862 . + . ID=LTnewLM_160016700.2:pep;Derives_from=LTnewLM_160016700.2;orthologous_to=LTnewLM_160016700.1,LmjF.16.1080.1_mRNA,LmjF.16.1080.2_mRNA;ortholog_cluster=OG0000130;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 414075 415058 1 + . ID=LTnewLM_160016800 LTnewLM_16 AUGUSTUS mRNA 414075 415058 1 + . ID=LTnewLM_160016800.1;Parent=LTnewLM_160016800 LTnewLM_16 AUGUSTUS CDS 414075 415058 1 + 0 ID=LTnewLM_160016800.1:CDS:1;Parent=LTnewLM_160016800.1 ### LTnewLM_16 . polypeptide 414075 415058 . + . ID=LTnewLM_160016800.1:pep;Derives_from=LTnewLM_160016800.1;product=term%3Dhypothetical protein ### LTnewLM_16 . pseudogene 419288 425700 . + . ID=LTnewLM_160016900:pseudogene;coverage=0.991;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1090_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 419288 425700 . + . ID=LTnewLM_160016900.1;Parent=LTnewLM_160016900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 419288 425700 . + . ID=LTnewLM_160016900.1:pseudogenic_exon:1;Parent=LTnewLM_160016900.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 419288 425700 . + . ID=LTnewLM_160016900.1:pep;Derives_from=LTnewLM_160016900.1;orthologous_to=LmjF.16.1090_mRNA;ortholog_cluster=OG0007473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . pseudogene 427336 430088 . + . ID=LTnewLM_160017000:pseudogene;coverage=0.998;sequence_ID=0.937;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1100_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 427336 430088 . + . ID=LTnewLM_160017000.1;Parent=LTnewLM_160017000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 427336 430088 . + . ID=LTnewLM_160017000.1:pseudogenic_exon:1;Parent=LTnewLM_160017000.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 427336 430088 . + . ID=LTnewLM_160017000.1:pep;Derives_from=LTnewLM_160017000.1;product=term%3Dhypothetical protein ### LTnewLM_16 AUGUSTUS gene 432609 434198 1 + . ID=LTnewLM_160017100 LTnewLM_16 AUGUSTUS mRNA 432609 434198 1 + . ID=LTnewLM_160017100.1;Parent=LTnewLM_160017100 LTnewLM_16 AUGUSTUS CDS 432609 434198 1 + 0 ID=LTnewLM_160017100.1:CDS:1;Parent=LTnewLM_160017100.1 ### LTnewLM_16 . polypeptide 432609 434198 . + . ID=LTnewLM_160017100.1:pep;Derives_from=LTnewLM_160017100.1;orthologous_to=LmjF.16.1110_mRNA;ortholog_cluster=OG0001400;product=term%3DPolyketide cyclase / dehydrase and lipid transport%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03364 LTnewLM_16 Pfam protein_match 433491 434081 . + . Parent=LTnewLM_160017100.1:pep;Name=PF03364;signature_desc=Polyketide cyclase / dehydrase and lipid transport ### LTnewLM_16 AUGUSTUS gene 436072 436419 1 + . ID=LTnewLM_160017200 LTnewLM_16 AUGUSTUS mRNA 436072 436419 1 + . ID=LTnewLM_160017200.1;Parent=LTnewLM_160017200 LTnewLM_16 AUGUSTUS CDS 436072 436419 1 + 0 ID=LTnewLM_160017200.1:CDS:1;Parent=LTnewLM_160017200.1 ### LTnewLM_16 . polypeptide 436072 436419 . + . ID=LTnewLM_160017200.1:pep;Derives_from=LTnewLM_160017200.1;product=term%3Dhypothetical protein ### LTnewLM_16 . pseudogene 437870 438661 . + . ID=LTnewLM_160017300:pseudogene;coverage=0.974;sequence_ID=0.913;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1120_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 437870 438661 . + . ID=LTnewLM_160017300.1;Parent=LTnewLM_160017300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 437870 438661 . + . ID=LTnewLM_160017300.1:pseudogenic_exon:1;Parent=LTnewLM_160017300.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 437870 438661 . + . ID=LTnewLM_160017300.1:pep;Derives_from=LTnewLM_160017300.1;orthologous_to=LmjF.16.1120_mRNA;ortholog_cluster=OG0007474;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 439328 440041 1 + . ID=LTnewLM_160017400 LTnewLM_16 AUGUSTUS mRNA 439328 440041 1 + . ID=LTnewLM_160017400.1;Parent=LTnewLM_160017400 LTnewLM_16 AUGUSTUS CDS 439328 440041 1 + 0 ID=LTnewLM_160017400.1:CDS:1;Parent=LTnewLM_160017400.1 ### LTnewLM_16 . polypeptide 439328 440041 . + . ID=LTnewLM_160017400.1:pep;Derives_from=LTnewLM_160017400.1;orthologous_to=LmjF.16.1130_mRNA;ortholog_cluster=OG0001401;product=term%3DPutative tRNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01588;Ontology_term=GO:0000049 LTnewLM_16 Pfam protein_match 439517 439849 . + . Parent=LTnewLM_160017400.1:pep;Name=PF01588;signature_desc=Putative tRNA binding domain;Ontology_term=GO:0000049 ### LTnewLM_16 Aragorn_1.2.36 gene 440407 440481 . - . ID=LTnewLM_160017500 LTnewLM_16 Aragorn_1.2.36 tRNA 440407 440481 . - . ID=LTnewLM_160017500:tRNA;Parent=LTnewLM_160017500;aa=Gln;anticodon=ctg;gc_content=53.3 ### LTnewLM_16 AUGUSTUS gene 440942 442864 1 - . ID=LTnewLM_160017600 LTnewLM_16 AUGUSTUS mRNA 440942 442864 1 - . ID=LTnewLM_160017600.1;Parent=LTnewLM_160017600 LTnewLM_16 AUGUSTUS CDS 440942 442864 1 - 0 ID=LTnewLM_160017600.1:CDS:1;Parent=LTnewLM_160017600.1 ### LTnewLM_16 . polypeptide 440942 442864 . - . ID=LTnewLM_160017600.1:pep;Derives_from=LTnewLM_160017600.1;orthologous_to=LmjF.16.1140_mRNA;ortholog_cluster=OG0001402;product=term%3DWW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 440954 441043 . - . Parent=LTnewLM_160017600.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 441122 441202 . - . Parent=LTnewLM_160017600.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 441275 441364 . - . Parent=LTnewLM_160017600.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 441440 441529 . - . Parent=LTnewLM_160017600.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_16 AUGUSTUS gene 444029 444382 1 - . ID=LTnewLM_160017700 LTnewLM_16 AUGUSTUS mRNA 444029 444382 1 - . ID=LTnewLM_160017700.1;Parent=LTnewLM_160017700 LTnewLM_16 AUGUSTUS CDS 444029 444382 1 - 0 ID=LTnewLM_160017700.1:CDS:1;Parent=LTnewLM_160017700.1 ### LTnewLM_16 . polypeptide 444029 444382 . - . ID=LTnewLM_160017700.1:pep;Derives_from=LTnewLM_160017700.1;orthologous_to=LmjF.16.1145_mRNA;ortholog_cluster=OG0001403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 Liftoff gene 445426 446502 . - . ID=LTnewLM_160017800;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1150_0 LTnewLM_16 Liftoff mRNA 445426 446502 . - . ID=LTnewLM_160017800.1;Parent=LTnewLM_160017800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 445426 446502 . - 0 ID=LTnewLM_160017800.1:CDS:1;Parent=LTnewLM_160017800.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 445426 446502 . - . ID=LTnewLM_160017800.1:pep;Derives_from=LTnewLM_160017800.1;orthologous_to=LmjF.16.1150_mRNA;ortholog_cluster=OG0001404;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 448121 449581 1 - . ID=LTnewLM_160017900 LTnewLM_16 AUGUSTUS mRNA 448121 449581 1 - . ID=LTnewLM_160017900.1;Parent=LTnewLM_160017900 LTnewLM_16 AUGUSTUS CDS 448121 449581 1 - 0 ID=LTnewLM_160017900.1:CDS:1;Parent=LTnewLM_160017900.1 ### LTnewLM_16 . polypeptide 448121 449581 . - . ID=LTnewLM_160017900.1:pep;Derives_from=LTnewLM_160017900.1;orthologous_to=LmjF.16.1160_mRNA;ortholog_cluster=OG0001405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 Liftoff gene 450540 450695 . - . ID=LTnewLM_160018000;coverage=1.0;sequence_ID=0.993;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.16.1170_0 LTnewLM_16 Liftoff mRNA 450540 450695 . - . ID=LTnewLM_160018000.1;Parent=LTnewLM_160018000;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 450540 450695 . - 0 ID=LTnewLM_160018000.1:CDS:1;Parent=LTnewLM_160018000.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 450540 450695 . - . ID=LTnewLM_160018000.1:pep;Derives_from=LTnewLM_160018000.1;orthologous_to=LTnewLM_290031900.1,LmjF.16.1170_mRNA,LmjF.29.2370_mRNA;ortholog_cluster=OG0000131;product=term%3DRibosomal L39 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00832;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_16 Pfam protein_match 450549 450671 . - . Parent=LTnewLM_160018000.1:pep;Name=PF00832;signature_desc=Ribosomal L39 protein;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_16 AUGUSTUS gene 451844 453454 1 - . ID=LTnewLM_160018100 LTnewLM_16 AUGUSTUS mRNA 451844 453454 1 - . ID=LTnewLM_160018100.1;Parent=LTnewLM_160018100 LTnewLM_16 AUGUSTUS CDS 451844 453454 1 - 0 ID=LTnewLM_160018100.1:CDS:1;Parent=LTnewLM_160018100.1 ### LTnewLM_16 . polypeptide 451844 453454 . - . ID=LTnewLM_160018100.1:pep;Derives_from=LTnewLM_160018100.1;orthologous_to=LmjF.16.1180_mRNA;ortholog_cluster=OG0001406;product=term%3DAdaptor complexes medium subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00928;Ontology_term=GO:0016192,GO:0005515,GO:0006886,GO:0030131 LTnewLM_16 Pfam protein_match 451997 452563 . - . Parent=LTnewLM_160018100.1:pep;Name=PF00928;signature_desc=Adaptor complexes medium subunit family;Ontology_term=GO:0005515,GO:0006886,GO:0016192,GO:0030131 ### LTnewLM_16 AUGUSTUS gene 454541 458863 1 - . ID=LTnewLM_160018200 LTnewLM_16 AUGUSTUS mRNA 454541 458863 1 - . ID=LTnewLM_160018200.1;Parent=LTnewLM_160018200 LTnewLM_16 AUGUSTUS CDS 454541 458863 1 - 0 ID=LTnewLM_160018200.1:CDS:1;Parent=LTnewLM_160018200.1 ### LTnewLM_16 . polypeptide 454541 458863 . - . ID=LTnewLM_160018200.1:pep;Derives_from=LTnewLM_160018200.1;orthologous_to=LmjF.16.1190_mRNA;ortholog_cluster=OG0001407;product=term%3DCalcium-dependent channel%2C 7TM region%2C putative phosphate%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02714;Ontology_term=GO:0016020 LTnewLM_16 Pfam protein_match 456011 456703 . - . Parent=LTnewLM_160018200.1:pep;Name=PF02714;signature_desc=Calcium-dependent channel%2C 7TM region%2C putative phosphate;Ontology_term=GO:0016020 ### LTnewLM_16 AUGUSTUS gene 460055 461155 1 - . ID=LTnewLM_160018300 LTnewLM_16 AUGUSTUS mRNA 460055 461155 1 - . ID=LTnewLM_160018300.1;Parent=LTnewLM_160018300 LTnewLM_16 AUGUSTUS CDS 460055 461155 1 - 0 ID=LTnewLM_160018300.1:CDS:1;Parent=LTnewLM_160018300.1 ### LTnewLM_16 . polypeptide 460055 461155 . - . ID=LTnewLM_160018300.1:pep;Derives_from=LTnewLM_160018300.1;orthologous_to=LmjF.16.1200_mRNA;ortholog_cluster=OG0001408;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_16 Pfam protein_match 460433 460918 . - . Parent=LTnewLM_160018300.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_16 AUGUSTUS gene 462114 465944 1 - . ID=LTnewLM_160018400 LTnewLM_16 AUGUSTUS mRNA 462114 465944 1 - . ID=LTnewLM_160018400.1;Parent=LTnewLM_160018400 LTnewLM_16 AUGUSTUS CDS 462114 465944 1 - 0 ID=LTnewLM_160018400.1:CDS:1;Parent=LTnewLM_160018400.1 ### LTnewLM_16 . polypeptide 462114 465944 . - . ID=LTnewLM_160018400.1:pep;Derives_from=LTnewLM_160018400.1;orthologous_to=LmjF.16.1210_mRNA;ortholog_cluster=OG0001409;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 467476 474054 1 - . ID=LTnewLM_160018500 LTnewLM_16 AUGUSTUS mRNA 467476 474054 1 - . ID=LTnewLM_160018500.1;Parent=LTnewLM_160018500 LTnewLM_16 AUGUSTUS CDS 467476 474054 1 - 0 ID=LTnewLM_160018500.1:CDS:1;Parent=LTnewLM_160018500.1 ### LTnewLM_16 . polypeptide 467476 474054 . - . ID=LTnewLM_160018500.1:pep;Derives_from=LTnewLM_160018500.1;orthologous_to=LmjF.16.1220_mRNA;ortholog_cluster=OG0001410;product=term%3DCullin family/Cullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888|Pfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_16 Pfam protein_match 467506 467688 . - . Parent=LTnewLM_160018500.1:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 LTnewLM_16 Pfam protein_match 467917 469392 . - . Parent=LTnewLM_160018500.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_16 AUGUSTUS gene 475857 481298 1 - . ID=LTnewLM_160018600 LTnewLM_16 AUGUSTUS mRNA 475857 481298 1 - . ID=LTnewLM_160018600.1;Parent=LTnewLM_160018600 LTnewLM_16 AUGUSTUS CDS 475857 481298 1 - 0 ID=LTnewLM_160018600.1:CDS:1;Parent=LTnewLM_160018600.1 ### LTnewLM_16 . polypeptide 475857 481298 . - . ID=LTnewLM_160018600.1:pep;Derives_from=LTnewLM_160018600.1;orthologous_to=LmjF.16.1230_mRNA;ortholog_cluster=OG0001411;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 482319 488831 1.58 - . ID=LTnewLM_160018700 LTnewLM_16 AUGUSTUS mRNA 482319 488831 1 - . ID=LTnewLM_160018700.1;Parent=LTnewLM_160018700 LTnewLM_16 AUGUSTUS CDS 482319 488831 1 - 0 ID=LTnewLM_160018700.1:CDS:1;Parent=LTnewLM_160018700.1 LTnewLM_16 AUGUSTUS mRNA 485920 488831 0.58 - . ID=LTnewLM_160018700.2;Parent=LTnewLM_160018700 LTnewLM_16 AUGUSTUS CDS 485920 485938 0.58 - 1 ID=LTnewLM_160018700.2:CDS:1;Parent=LTnewLM_160018700.2 LTnewLM_16 AUGUSTUS CDS 485992 488831 0.58 - 0 ID=LTnewLM_160018700.2:CDS:2;Parent=LTnewLM_160018700.2 ### LTnewLM_16 . polypeptide 482319 488831 . - . ID=LTnewLM_160018700.1:pep;Derives_from=LTnewLM_160018700.1;orthologous_to=LTnewLM_160018700.2,LmjF.16.1240_mRNA;ortholog_cluster=OG0000349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 485920 488831 . - . ID=LTnewLM_160018700.2:pep;Derives_from=LTnewLM_160018700.2;orthologous_to=LTnewLM_160018700.1,LmjF.16.1240_mRNA;ortholog_cluster=OG0000349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 491276 491718 1 - . ID=LTnewLM_160018800 LTnewLM_16 AUGUSTUS mRNA 491276 491718 1 - . ID=LTnewLM_160018800.1;Parent=LTnewLM_160018800 LTnewLM_16 AUGUSTUS CDS 491276 491443 1 - 0 ID=LTnewLM_160018800.1:CDS:1;Parent=LTnewLM_160018800.1 LTnewLM_16 AUGUSTUS CDS 491500 491718 1 - 0 ID=LTnewLM_160018800.1:CDS:2;Parent=LTnewLM_160018800.1 ### LTnewLM_16 . polypeptide 491276 491718 . - . ID=LTnewLM_160018800.1:pep;Derives_from=LTnewLM_160018800.1;orthologous_to=LmjF.16.1250_mRNA;ortholog_cluster=OG0001412;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 Liftoff gene 493157 498781 . - . ID=LTnewLM_160018900;coverage=0.997;sequence_ID=0.936;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.16.1260_0 LTnewLM_16 Liftoff mRNA 493157 498781 . - . ID=LTnewLM_160018900.1;Parent=LTnewLM_160018900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 493157 498781 . - 0 ID=LTnewLM_160018900.1:CDS:1;Parent=LTnewLM_160018900.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 493157 498781 . - . ID=LTnewLM_160018900.1:pep;Derives_from=LTnewLM_160018900.1;orthologous_to=LmjF.16.1260_mRNA;ortholog_cluster=OG0001413;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 499544 506095 1 - . ID=LTnewLM_160019000 LTnewLM_16 AUGUSTUS mRNA 499544 506095 1 - . ID=LTnewLM_160019000.1;Parent=LTnewLM_160019000 LTnewLM_16 AUGUSTUS CDS 499544 506095 1 - 0 ID=LTnewLM_160019000.1:CDS:1;Parent=LTnewLM_160019000.1 ### LTnewLM_16 . polypeptide 499544 506095 . - . ID=LTnewLM_160019000.1:pep;Derives_from=LTnewLM_160019000.1;orthologous_to=LmjF.16.1270_mRNA;ortholog_cluster=OG0001414;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 507405 507704 0.99 - . ID=LTnewLM_160019100 LTnewLM_16 AUGUSTUS mRNA 507405 507704 0.99 - . ID=LTnewLM_160019100.1;Parent=LTnewLM_160019100 LTnewLM_16 AUGUSTUS CDS 507405 507704 0.99 - 0 ID=LTnewLM_160019100.1:CDS:1;Parent=LTnewLM_160019100.1 ### LTnewLM_16 . polypeptide 507405 507704 . - . ID=LTnewLM_160019100.1:pep;Derives_from=LTnewLM_160019100.1;orthologous_to=LmjF.16.1280_mRNA;ortholog_cluster=OG0001415;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 508311 510509 1 - . ID=LTnewLM_160019200 LTnewLM_16 AUGUSTUS mRNA 508311 510509 1 - . ID=LTnewLM_160019200.1;Parent=LTnewLM_160019200 LTnewLM_16 AUGUSTUS CDS 508311 510509 1 - 0 ID=LTnewLM_160019200.1:CDS:1;Parent=LTnewLM_160019200.1 ### LTnewLM_16 . polypeptide 508311 510509 . - . ID=LTnewLM_160019200.1:pep;Derives_from=LTnewLM_160019200.1;orthologous_to=LmjF.16.1290_mRNA;ortholog_cluster=OG0001416;product=term%3DDiacylglycerol kinase catalytic domain/Diacylglycerol kinase accessory domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00781|Pfam:PF00609;Ontology_term=GO:0004143,GO:0007205 LTnewLM_16 Pfam protein_match 508560 509138 . - . Parent=LTnewLM_160019200.1:pep;Name=PF00609;signature_desc=Diacylglycerol kinase accessory domain;Ontology_term=GO:0004143,GO:0007205 LTnewLM_16 Pfam protein_match 509547 509813 . - . Parent=LTnewLM_160019200.1:pep;Name=PF00781;signature_desc=Diacylglycerol kinase catalytic domain;Ontology_term=GO:0004143,GO:0007205 ### LTnewLM_16 AUGUSTUS gene 511751 514753 1 - . ID=LTnewLM_160019300 LTnewLM_16 AUGUSTUS mRNA 511751 514753 1 - . ID=LTnewLM_160019300.1;Parent=LTnewLM_160019300 LTnewLM_16 AUGUSTUS CDS 511751 514753 1 - 0 ID=LTnewLM_160019300.1:CDS:1;Parent=LTnewLM_160019300.1 ### LTnewLM_16 . polypeptide 511751 514753 . - . ID=LTnewLM_160019300.1:pep;Derives_from=LTnewLM_160019300.1;orthologous_to=LmjF.16.1300_mRNA;ortholog_cluster=OG0001417;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 518158 518499 1 - . ID=LTnewLM_160019400 LTnewLM_16 AUGUSTUS mRNA 518158 518499 1 - . ID=LTnewLM_160019400.1;Parent=LTnewLM_160019400 LTnewLM_16 AUGUSTUS CDS 518158 518499 1 - 0 ID=LTnewLM_160019400.1:CDS:1;Parent=LTnewLM_160019400.1 ### LTnewLM_16 . polypeptide 518158 518499 . - . ID=LTnewLM_160019400.1:pep;Derives_from=LTnewLM_160019400.1;product=term%3DCytochrome c%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00034;Ontology_term=GO:0020037,GO:0009055 LTnewLM_16 Pfam protein_match 518164 518460 . - . Parent=LTnewLM_160019400.1:pep;Name=PF00034;signature_desc=Cytochrome c;Ontology_term=GO:0009055,GO:0020037 ### LTnewLM_16 AUGUSTUS gene 520996 521337 1 - . ID=LTnewLM_160019500 LTnewLM_16 AUGUSTUS mRNA 520996 521337 1 - . ID=LTnewLM_160019500.1;Parent=LTnewLM_160019500 LTnewLM_16 AUGUSTUS CDS 520996 521337 1 - 0 ID=LTnewLM_160019500.1:CDS:1;Parent=LTnewLM_160019500.1 ### LTnewLM_16 . polypeptide 520996 521337 . - . ID=LTnewLM_160019500.1:pep;Derives_from=LTnewLM_160019500.1;orthologous_to=LmjF.16.1310_mRNA,LmjF.16.1320_mRNA;ortholog_cluster=OG0000350;product=term%3DCytochrome c%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00034;Ontology_term=GO:0020037,GO:0009055 LTnewLM_16 Pfam protein_match 521002 521298 . - . Parent=LTnewLM_160019500.1:pep;Name=PF00034;signature_desc=Cytochrome c;Ontology_term=GO:0009055,GO:0020037 ### LTnewLM_16 AUGUSTUS gene 523638 527795 1.66 - . ID=LTnewLM_160019600 LTnewLM_16 AUGUSTUS mRNA 523638 527795 1 - . ID=LTnewLM_160019600.1;Parent=LTnewLM_160019600 LTnewLM_16 AUGUSTUS CDS 523638 527795 1 - 0 ID=LTnewLM_160019600.1:CDS:1;Parent=LTnewLM_160019600.1 LTnewLM_16 AUGUSTUS mRNA 524515 527795 0.66 - . ID=LTnewLM_160019600.2;Parent=LTnewLM_160019600 LTnewLM_16 AUGUSTUS CDS 524515 524531 0.66 - 2 ID=LTnewLM_160019600.2:CDS:1;Parent=LTnewLM_160019600.2 LTnewLM_16 AUGUSTUS CDS 524627 527795 1 - 0 ID=LTnewLM_160019600.2:CDS:2;Parent=LTnewLM_160019600.2 ### LTnewLM_16 . polypeptide 523638 527795 . - . ID=LTnewLM_160019600.1:pep;Derives_from=LTnewLM_160019600.1;orthologous_to=LTnewLM_160019600.2,LmjF.16.1330_mRNA;ortholog_cluster=OG0000351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 524515 527795 . - . ID=LTnewLM_160019600.2:pep;Derives_from=LTnewLM_160019600.2;orthologous_to=LTnewLM_160019600.1,LmjF.16.1330_mRNA;ortholog_cluster=OG0000351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 529763 541045 1 - . ID=LTnewLM_160019700 LTnewLM_16 AUGUSTUS mRNA 529763 541045 1 - . ID=LTnewLM_160019700.1;Parent=LTnewLM_160019700 LTnewLM_16 AUGUSTUS CDS 529763 541045 1 - 0 ID=LTnewLM_160019700.1:CDS:1;Parent=LTnewLM_160019700.1 ### LTnewLM_16 . polypeptide 529763 541045 . - . ID=LTnewLM_160019700.1:pep;Derives_from=LTnewLM_160019700.1;orthologous_to=LmjF.16.1340_mRNA;ortholog_cluster=OG0001418;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 542863 548295 1 - . ID=LTnewLM_160019800 LTnewLM_16 AUGUSTUS mRNA 542863 548295 1 - . ID=LTnewLM_160019800.1;Parent=LTnewLM_160019800 LTnewLM_16 AUGUSTUS CDS 542863 548295 1 - 0 ID=LTnewLM_160019800.1:CDS:1;Parent=LTnewLM_160019800.1 ### LTnewLM_16 . polypeptide 542863 548295 . - . ID=LTnewLM_160019800.1:pep;Derives_from=LTnewLM_160019800.1;orthologous_to=LmjF.16.1350_mRNA;ortholog_cluster=OG0001419;product=term%3DRNA polymerase Rpb1%2C domain 2/RNA polymerase Rpb1%2C domain 3/RNA polymerase Rpb1%2C domain 4/RNA polymerase Rpb1%2C domain 5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00623|Pfam:PF04983|Pfam:PF05000|Pfam:PF04998;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_16 Pfam protein_match 543067 545253 . - . Parent=LTnewLM_160019800.1:pep;Name=PF04998;signature_desc=RNA polymerase Rpb1%2C domain 5;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_16 Pfam protein_match 545278 545454 . - . Parent=LTnewLM_160019800.1:pep;Name=PF05000;signature_desc=RNA polymerase Rpb1%2C domain 4;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_16 Pfam protein_match 545620 546237 . - . Parent=LTnewLM_160019800.1:pep;Name=PF04983;signature_desc=RNA polymerase Rpb1%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_16 Pfam protein_match 546253 546789 . - . Parent=LTnewLM_160019800.1:pep;Name=PF00623;signature_desc=RNA polymerase Rpb1%2C domain 2;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_16 AUGUSTUS gene 550309 552108 1 - . ID=LTnewLM_160019900 LTnewLM_16 AUGUSTUS mRNA 550309 552108 1 - . ID=LTnewLM_160019900.1;Parent=LTnewLM_160019900 LTnewLM_16 AUGUSTUS CDS 550309 552108 1 - 0 ID=LTnewLM_160019900.1:CDS:1;Parent=LTnewLM_160019900.1 ### LTnewLM_16 . polypeptide 550309 552108 . - . ID=LTnewLM_160019900.1:pep;Derives_from=LTnewLM_160019900.1;orthologous_to=LmjF.16.1360_mRNA;ortholog_cluster=OG0001420;product=term%3DAmidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01425;Ontology_term=GO:0016884 LTnewLM_16 Pfam protein_match 550396 551853 . - . Parent=LTnewLM_160019900.1:pep;Name=PF01425;signature_desc=Amidase;Ontology_term=GO:0016884 ### LTnewLM_16 AUGUSTUS gene 554423 554749 1 - . ID=LTnewLM_160020000 LTnewLM_16 AUGUSTUS mRNA 554423 554749 1 - . ID=LTnewLM_160020000.1;Parent=LTnewLM_160020000 LTnewLM_16 AUGUSTUS CDS 554423 554749 1 - 0 ID=LTnewLM_160020000.1:CDS:1;Parent=LTnewLM_160020000.1 ### LTnewLM_16 . polypeptide 554423 554749 . - . ID=LTnewLM_160020000.1:pep;Derives_from=LTnewLM_160020000.1;orthologous_to=LmjF.16.1370_mRNA;ortholog_cluster=OG0001421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 556326 556874 1 - . ID=LTnewLM_160020100 LTnewLM_16 AUGUSTUS mRNA 556326 556874 1 - . ID=LTnewLM_160020100.1;Parent=LTnewLM_160020100 LTnewLM_16 AUGUSTUS CDS 556326 556874 1 - 0 ID=LTnewLM_160020100.1:CDS:1;Parent=LTnewLM_160020100.1 ### LTnewLM_16 . polypeptide 556326 556874 . - . ID=LTnewLM_160020100.1:pep;Derives_from=LTnewLM_160020100.1;orthologous_to=LmjF.16.1380_mRNA;ortholog_cluster=OG0001422;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family/Gtr1/RagA G protein conserved region/Elongation factor Tu GTP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071|Pfam:PF04670|Pfam:PF00009;Ontology_term=GO:0005525,GO:0005737,GO:0003924,GO:0005634,GO:0007264,GO:0005622 LTnewLM_16 Pfam protein_match 556368 556868 . - . Parent=LTnewLM_160020100.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_16 Pfam protein_match 556461 556811 . - . Parent=LTnewLM_160020100.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_16 Pfam protein_match 556467 556853 . - . Parent=LTnewLM_160020100.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_16 Pfam protein_match 556482 556847 . - . Parent=LTnewLM_160020100.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_16 Pfam protein_match 556500 556847 . - . Parent=LTnewLM_160020100.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_16 Pfam protein_match 556509 556847 . - . Parent=LTnewLM_160020100.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_16 Pfam protein_match 556518 556847 . - . Parent=LTnewLM_160020100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_16 AUGUSTUS gene 559809 562610 1 - . ID=LTnewLM_160020200 LTnewLM_16 AUGUSTUS mRNA 559809 562610 1 - . ID=LTnewLM_160020200.1;Parent=LTnewLM_160020200 LTnewLM_16 AUGUSTUS CDS 559809 562610 1 - 0 ID=LTnewLM_160020200.1:CDS:1;Parent=LTnewLM_160020200.1 ### LTnewLM_16 . polypeptide 559809 562610 . - . ID=LTnewLM_160020200.1:pep;Derives_from=LTnewLM_160020200.1;orthologous_to=LTnewLM_350019100.1,LmjF.35.1390_mRNA;ortholog_cluster=OG0000352;product=term%3DOTU-like cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02338 LTnewLM_16 Pfam protein_match 561156 561416 . - . Parent=LTnewLM_160020200.1:pep;Name=PF02338;signature_desc=OTU-like cysteine protease ### LTnewLM_16 AUGUSTUS gene 564395 565258 1 - . ID=LTnewLM_160020300 LTnewLM_16 AUGUSTUS mRNA 564395 565258 1 - . ID=LTnewLM_160020300.1;Parent=LTnewLM_160020300 LTnewLM_16 AUGUSTUS CDS 564395 565258 1 - 0 ID=LTnewLM_160020300.1:CDS:1;Parent=LTnewLM_160020300.1 ### LTnewLM_16 . polypeptide 564395 565258 . - . ID=LTnewLM_160020300.1:pep;Derives_from=LTnewLM_160020300.1;orthologous_to=LmjF.16.1390_mRNA;ortholog_cluster=OG0001423;product=term%3DEMG1/NEP1 methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03587;Ontology_term=GO:0008168 LTnewLM_16 Pfam protein_match 564434 565186 . - . Parent=LTnewLM_160020300.1:pep;Name=PF03587;signature_desc=EMG1/NEP1 methyltransferase;Ontology_term=GO:0008168 ### LTnewLM_16 AUGUSTUS gene 566473 567063 1 - . ID=LTnewLM_160020400 LTnewLM_16 AUGUSTUS mRNA 566473 567063 1 - . ID=LTnewLM_160020400.1;Parent=LTnewLM_160020400 LTnewLM_16 AUGUSTUS CDS 566473 567063 1 - 0 ID=LTnewLM_160020400.1:CDS:1;Parent=LTnewLM_160020400.1 ### LTnewLM_16 . polypeptide 566473 567063 . - . ID=LTnewLM_160020400.1:pep;Derives_from=LTnewLM_160020400.1;orthologous_to=LmjF.16.1400_mRNA;ortholog_cluster=OG0001424;product=term%3DTransport protein particle (TRAPP) component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04051 LTnewLM_16 Pfam protein_match 566530 566973 . - . Parent=LTnewLM_160020400.1:pep;Name=PF04051;signature_desc=Transport protein particle (TRAPP) component ### LTnewLM_16 . polypeptide 567873 569441 . - . ID=LTnewLM_160020500.1:pep;Derives_from=LTnewLM_160020500.1;orthologous_to=LmjF.16.1410.1_mRNA,LmjF.16.1410.2_mRNA;ortholog_cluster=OG0000515;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 567873 569665 . - . ID=LTnewLM_160020500.2:pep;Derives_from=LTnewLM_160020500.2;product=term%3Dhypothetical protein ### LTnewLM_16 . pseudogene 567873 571107 . - . ID=LTnewLM_160020500:pseudogene;coverage=0.993;sequence_ID=0.920;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.16.1410_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 567873 569564 . - . ID=LTnewLM_160020500.1;Parent=LTnewLM_160020500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 567873 569441 . - . ID=LTnewLM_160020500.1:pseudogenic_exon:1;Parent=LTnewLM_160020500.1;extra_copy_number=0 LTnewLM_16 . pseudogenic_transcript 567873 571107 . - . ID=LTnewLM_160020500.2;Parent=LTnewLM_160020500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 567873 569665 . - . ID=LTnewLM_160020500.2:pseudogenic_exon:1;Parent=LTnewLM_160020500.2;extra_copy_number=0 ### LTnewLM_16 AUGUSTUS gene 571660 573240 1 - . ID=LTnewLM_160020600 LTnewLM_16 AUGUSTUS mRNA 571660 573240 1 - . ID=LTnewLM_160020600.1;Parent=LTnewLM_160020600 LTnewLM_16 AUGUSTUS CDS 571660 573240 1 - 0 ID=LTnewLM_160020600.1:CDS:1;Parent=LTnewLM_160020600.1 ### LTnewLM_16 . polypeptide 571660 573240 . - . ID=LTnewLM_160020600.1:pep;Derives_from=LTnewLM_160020600.1;orthologous_to=LmjF.16.1420_mRNA;ortholog_cluster=OG0001425;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 576023 577822 1 - . ID=LTnewLM_160020700 LTnewLM_16 AUGUSTUS mRNA 576023 577822 1 - . ID=LTnewLM_160020700.1;Parent=LTnewLM_160020700 LTnewLM_16 AUGUSTUS CDS 576023 577822 1 - 0 ID=LTnewLM_160020700.1:CDS:1;Parent=LTnewLM_160020700.1 ### LTnewLM_16 . polypeptide 576023 577822 . - . ID=LTnewLM_160020700.1:pep;Derives_from=LTnewLM_160020700.1;orthologous_to=LTnewLM_000006900.1,LTnewLM_160020800.1,LTnewLM_160020900.1,LmjF.16.1425_mRNA,LmjF.16.1427_mRNA,LmjF.16.1430_mRNA;ortholog_cluster=OG0000037;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_16 Pfam protein_match 576137 576991 . - . Parent=LTnewLM_160020700.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_16 AUGUSTUS gene 579355 581154 1 - . ID=LTnewLM_160020800 LTnewLM_16 AUGUSTUS mRNA 579355 581154 1 - . ID=LTnewLM_160020800.1;Parent=LTnewLM_160020800 LTnewLM_16 AUGUSTUS CDS 579355 581154 1 - 0 ID=LTnewLM_160020800.1:CDS:1;Parent=LTnewLM_160020800.1 ### LTnewLM_16 . polypeptide 579355 581154 . - . ID=LTnewLM_160020800.1:pep;Derives_from=LTnewLM_160020800.1;orthologous_to=LTnewLM_000006900.1,LTnewLM_160020700.1,LTnewLM_160020900.1,LmjF.16.1425_mRNA,LmjF.16.1427_mRNA,LmjF.16.1430_mRNA;ortholog_cluster=OG0000037;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_16 Pfam protein_match 579469 580323 . - . Parent=LTnewLM_160020800.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_16 AUGUSTUS gene 582731 584530 1 - . ID=LTnewLM_160020900 LTnewLM_16 AUGUSTUS mRNA 582731 584530 1 - . ID=LTnewLM_160020900.1;Parent=LTnewLM_160020900 LTnewLM_16 AUGUSTUS CDS 582731 584530 1 - 0 ID=LTnewLM_160020900.1:CDS:1;Parent=LTnewLM_160020900.1 ### LTnewLM_16 . polypeptide 582731 584530 . - . ID=LTnewLM_160020900.1:pep;Derives_from=LTnewLM_160020900.1;orthologous_to=LTnewLM_000006900.1,LTnewLM_160020700.1,LTnewLM_160020800.1,LmjF.16.1425_mRNA,LmjF.16.1427_mRNA,LmjF.16.1430_mRNA;ortholog_cluster=OG0000037;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_16 Pfam protein_match 582845 583699 . - . Parent=LTnewLM_160020900.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_16 AUGUSTUS gene 587433 593075 2.2 - . ID=LTnewLM_160021000 LTnewLM_16 AUGUSTUS mRNA 587433 593075 1 - . ID=LTnewLM_160021000.1;Parent=LTnewLM_160021000 LTnewLM_16 AUGUSTUS CDS 587433 593075 1 - 0 ID=LTnewLM_160021000.1:CDS:1;Parent=LTnewLM_160021000.1 LTnewLM_16 AUGUSTUS mRNA 588349 593075 0.85 - . ID=LTnewLM_160021000.2;Parent=LTnewLM_160021000 LTnewLM_16 AUGUSTUS CDS 588349 588384 0.85 - 0 ID=LTnewLM_160021000.2:CDS:1;Parent=LTnewLM_160021000.2 LTnewLM_16 AUGUSTUS CDS 588450 593075 0.85 - 0 ID=LTnewLM_160021000.2:CDS:2;Parent=LTnewLM_160021000.2 LTnewLM_16 AUGUSTUS mRNA 590882 593075 0.35 - . ID=LTnewLM_160021000.3;Parent=LTnewLM_160021000 LTnewLM_16 AUGUSTUS CDS 590882 590915 0.38 - 1 ID=LTnewLM_160021000.3:CDS:1;Parent=LTnewLM_160021000.3 LTnewLM_16 AUGUSTUS CDS 590974 593075 0.4 - 0 ID=LTnewLM_160021000.3:CDS:2;Parent=LTnewLM_160021000.3 ### LTnewLM_16 . polypeptide 587433 593075 . - . ID=LTnewLM_160021000.1:pep;Derives_from=LTnewLM_160021000.1;orthologous_to=LTnewLM_160021000.2,LTnewLM_160021000.3,LmjF.16.1440_mRNA;ortholog_cluster=OG0000132;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 588349 593075 . - . ID=LTnewLM_160021000.2:pep;Derives_from=LTnewLM_160021000.2;orthologous_to=LTnewLM_160021000.1,LTnewLM_160021000.3,LmjF.16.1440_mRNA;ortholog_cluster=OG0000132;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 . polypeptide 590882 593075 . - . ID=LTnewLM_160021000.3:pep;Derives_from=LTnewLM_160021000.3;orthologous_to=LTnewLM_160021000.1,LTnewLM_160021000.2,LmjF.16.1440_mRNA;ortholog_cluster=OG0000132;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 593715 594620 1 - . ID=LTnewLM_160021100 LTnewLM_16 AUGUSTUS mRNA 593715 594620 1 - . ID=LTnewLM_160021100.1;Parent=LTnewLM_160021100 LTnewLM_16 AUGUSTUS CDS 593715 594620 1 - 0 ID=LTnewLM_160021100.1:CDS:1;Parent=LTnewLM_160021100.1 ### LTnewLM_16 . polypeptide 593715 594620 . - . ID=LTnewLM_160021100.1:pep;Derives_from=LTnewLM_160021100.1;orthologous_to=LmjF.16.1450_mRNA;ortholog_cluster=OG0001426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 596115 603292 0.49 - . ID=LTnewLM_160021200 LTnewLM_16 AUGUSTUS mRNA 596115 603292 0.49 - . ID=LTnewLM_160021200.1;Parent=LTnewLM_160021200 LTnewLM_16 AUGUSTUS CDS 596115 602199 0.63 - 1 ID=LTnewLM_160021200.1:CDS:1;Parent=LTnewLM_160021200.1 LTnewLM_16 AUGUSTUS CDS 602337 603292 0.49 - 0 ID=LTnewLM_160021200.1:CDS:2;Parent=LTnewLM_160021200.1 ### LTnewLM_16 . polypeptide 596115 603292 . - . ID=LTnewLM_160021200.1:pep;Derives_from=LTnewLM_160021200.1;orthologous_to=LTnewLM_160021300.1,LTnewLM_160021300.2,LmjF.16.1460_mRNA,LmjF.16.1470_mRNA;ortholog_cluster=OG0000081;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_16 Pfam protein_match 602051 602335 . - . Parent=LTnewLM_160021200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_16 Pfam protein_match 602342 602923 . - . Parent=LTnewLM_160021200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_16 Pfam protein_match 602474 602938 . - . Parent=LTnewLM_160021200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_16 . polypeptide 605996 608587 . - . ID=LTnewLM_160021300.1:pep;Derives_from=LTnewLM_160021300.1;orthologous_to=LTnewLM_160021200.1,LTnewLM_160021300.2,LmjF.16.1460_mRNA,LmjF.16.1470_mRNA;ortholog_cluster=OG0000081;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_16 Pfam protein_match 607529 608536 . - . Parent=LTnewLM_160021300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_16 Pfam protein_match 608087 608551 . - . Parent=LTnewLM_160021300.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_16 AUGUSTUS gene 605996 608953 1.83 - . ID=LTnewLM_160021300 LTnewLM_16 AUGUSTUS mRNA 605996 608587 1 - . ID=LTnewLM_160021300.1;Parent=LTnewLM_160021300 LTnewLM_16 AUGUSTUS CDS 605996 608587 1 - 0 ID=LTnewLM_160021300.1:CDS:1;Parent=LTnewLM_160021300.1 LTnewLM_16 AUGUSTUS mRNA 605996 608953 0.83 - . ID=LTnewLM_160021300.2;Parent=LTnewLM_160021300 LTnewLM_16 AUGUSTUS CDS 605996 608953 0.83 - 0 ID=LTnewLM_160021300.2:CDS:1;Parent=LTnewLM_160021300.2 ### LTnewLM_16 . polypeptide 605996 608953 . - . ID=LTnewLM_160021300.2:pep;Derives_from=LTnewLM_160021300.2;orthologous_to=LTnewLM_160021200.1,LTnewLM_160021300.1,LmjF.16.1460_mRNA,LmjF.16.1470_mRNA;ortholog_cluster=OG0000081;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_16 Pfam protein_match 607529 608536 . - . Parent=LTnewLM_160021300.2:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_16 Pfam protein_match 608087 608551 . - . Parent=LTnewLM_160021300.2:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_16 AUGUSTUS gene 614683 616605 1 - . ID=LTnewLM_160021400 LTnewLM_16 AUGUSTUS mRNA 614683 616605 1 - . ID=LTnewLM_160021400.1;Parent=LTnewLM_160021400 LTnewLM_16 AUGUSTUS CDS 614683 616605 1 - 0 ID=LTnewLM_160021400.1:CDS:1;Parent=LTnewLM_160021400.1 ### LTnewLM_16 . polypeptide 614683 616605 . - . ID=LTnewLM_160021400.1:pep;Derives_from=LTnewLM_160021400.1;orthologous_to=LmjF.16.1480_mRNA;ortholog_cluster=OG0001427;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 619315 620409 1 - . ID=LTnewLM_160021500 LTnewLM_16 AUGUSTUS mRNA 619315 620409 1 - . ID=LTnewLM_160021500.1;Parent=LTnewLM_160021500 LTnewLM_16 AUGUSTUS CDS 619315 620409 1 - 0 ID=LTnewLM_160021500.1:CDS:1;Parent=LTnewLM_160021500.1 ### LTnewLM_16 . polypeptide 619315 620409 . - . ID=LTnewLM_160021500.1:pep;Derives_from=LTnewLM_160021500.1;orthologous_to=LmjF.16.1490_mRNA;ortholog_cluster=OG0001428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 621637 623349 1 - . ID=LTnewLM_160021600 LTnewLM_16 AUGUSTUS mRNA 621637 623349 1 - . ID=LTnewLM_160021600.1;Parent=LTnewLM_160021600 LTnewLM_16 AUGUSTUS CDS 621637 623349 1 - 0 ID=LTnewLM_160021600.1:CDS:1;Parent=LTnewLM_160021600.1 ### LTnewLM_16 . polypeptide 621637 623349 . - . ID=LTnewLM_160021600.1:pep;Derives_from=LTnewLM_160021600.1;orthologous_to=LmjF.16.1500_mRNA;ortholog_cluster=OG0001429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 624797 625138 1 - . ID=LTnewLM_160021700 LTnewLM_16 AUGUSTUS mRNA 624797 625138 1 - . ID=LTnewLM_160021700.1;Parent=LTnewLM_160021700 LTnewLM_16 AUGUSTUS CDS 624797 625138 1 - 0 ID=LTnewLM_160021700.1:CDS:1;Parent=LTnewLM_160021700.1 ### LTnewLM_16 . polypeptide 624797 625138 . - . ID=LTnewLM_160021700.1:pep;Derives_from=LTnewLM_160021700.1;orthologous_to=LmjF.16.1510_mRNA;ortholog_cluster=OG0001430;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 626570 630022 1 - . ID=LTnewLM_160021800 LTnewLM_16 AUGUSTUS mRNA 626570 630022 1 - . ID=LTnewLM_160021800.1;Parent=LTnewLM_160021800 LTnewLM_16 AUGUSTUS CDS 626570 630022 1 - 0 ID=LTnewLM_160021800.1:CDS:1;Parent=LTnewLM_160021800.1 ### LTnewLM_16 . polypeptide 626570 630022 . - . ID=LTnewLM_160021800.1:pep;Derives_from=LTnewLM_160021800.1;orthologous_to=LmjF.16.1520_mRNA;ortholog_cluster=OG0001431;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 632867 634198 1 + . ID=LTnewLM_160021900 LTnewLM_16 AUGUSTUS mRNA 632867 634198 1 + . ID=LTnewLM_160021900.1;Parent=LTnewLM_160021900 LTnewLM_16 AUGUSTUS CDS 632867 634198 1 + 0 ID=LTnewLM_160021900.1:CDS:1;Parent=LTnewLM_160021900.1 ### LTnewLM_16 . polypeptide 632867 634198 . + . ID=LTnewLM_160021900.1:pep;Derives_from=LTnewLM_160021900.1;orthologous_to=LmjF.16.1530_mRNA;ortholog_cluster=OG0001432;product=term%3DEndoplasmic Reticulum Oxidoreductin 1 (ERO1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04137;Ontology_term=GO:0055114,GO:0005783,GO:0003756,GO:0016671 LTnewLM_16 Pfam protein_match 633086 634120 . + . Parent=LTnewLM_160021900.1:pep;Name=PF04137;signature_desc=Endoplasmic Reticulum Oxidoreductin 1 (ERO1);Ontology_term=GO:0003756,GO:0016671,GO:0055114,GO:0005783 ### LTnewLM_16 AUGUSTUS gene 634777 638796 1 + . ID=LTnewLM_160022000 LTnewLM_16 AUGUSTUS mRNA 634777 638796 1 + . ID=LTnewLM_160022000.1;Parent=LTnewLM_160022000 LTnewLM_16 AUGUSTUS CDS 634777 638796 1 + 0 ID=LTnewLM_160022000.1:CDS:1;Parent=LTnewLM_160022000.1 ### LTnewLM_16 . polypeptide 634777 638796 . + . ID=LTnewLM_160022000.1:pep;Derives_from=LTnewLM_160022000.1;orthologous_to=LmjF.16.1540_mRNA;ortholog_cluster=OG0001433;product=term%3DDNA polymerase family B%2C exonuclease domain/DNA polymerase family B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03104|Pfam:PF00136;Ontology_term=GO:0000166,GO:0003677,GO:0008408 LTnewLM_16 Pfam protein_match 635614 636588 . + . Parent=LTnewLM_160022000.1:pep;Name=PF03104;signature_desc=DNA polymerase family B%2C exonuclease domain;Ontology_term=GO:0008408 LTnewLM_16 Pfam protein_match 636808 638133 . + . Parent=LTnewLM_160022000.1:pep;Name=PF00136;signature_desc=DNA polymerase family B;Ontology_term=GO:0000166,GO:0003677 ### LTnewLM_16 AUGUSTUS gene 640549 644244 1 + . ID=LTnewLM_160022100 LTnewLM_16 AUGUSTUS mRNA 640549 644244 1 + . ID=LTnewLM_160022100.1;Parent=LTnewLM_160022100 LTnewLM_16 AUGUSTUS CDS 640549 644244 1 + 0 ID=LTnewLM_160022100.1:CDS:1;Parent=LTnewLM_160022100.1 ### LTnewLM_16 . polypeptide 640549 644244 . + . ID=LTnewLM_160022100.1:pep;Derives_from=LTnewLM_160022100.1;orthologous_to=LmjF.16.1550_mRNA;ortholog_cluster=OG0001434;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_16 Pfam protein_match 641995 642096 . + . Parent=LTnewLM_160022100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_16 AUGUSTUS gene 645558 647636 1 + . ID=LTnewLM_160022200 LTnewLM_16 AUGUSTUS mRNA 645558 647636 1 + . ID=LTnewLM_160022200.1;Parent=LTnewLM_160022200 LTnewLM_16 AUGUSTUS CDS 645558 647636 1 + 0 ID=LTnewLM_160022200.1:CDS:1;Parent=LTnewLM_160022200.1 ### LTnewLM_16 . polypeptide 645558 647636 . + . ID=LTnewLM_160022200.1:pep;Derives_from=LTnewLM_160022200.1;orthologous_to=LmjF.16.1560_mRNA;ortholog_cluster=OG0001435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 648591 649616 1 + . ID=LTnewLM_160022300 LTnewLM_16 AUGUSTUS mRNA 648591 649616 1 + . ID=LTnewLM_160022300.1;Parent=LTnewLM_160022300 LTnewLM_16 AUGUSTUS CDS 648591 649616 1 + 0 ID=LTnewLM_160022300.1:CDS:1;Parent=LTnewLM_160022300.1 ### LTnewLM_16 . polypeptide 648591 649616 . + . ID=LTnewLM_160022300.1:pep;Derives_from=LTnewLM_160022300.1;orthologous_to=LmjF.16.1570_mRNA;ortholog_cluster=OG0001436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 650608 653856 1 + . ID=LTnewLM_160022400 LTnewLM_16 AUGUSTUS mRNA 650608 653856 1 + . ID=LTnewLM_160022400.1;Parent=LTnewLM_160022400 LTnewLM_16 AUGUSTUS CDS 650608 653856 1 + 0 ID=LTnewLM_160022400.1:CDS:1;Parent=LTnewLM_160022400.1 ### LTnewLM_16 . polypeptide 650608 653856 . + . ID=LTnewLM_160022400.1:pep;Derives_from=LTnewLM_160022400.1;orthologous_to=LmjF.16.1580_mRNA;ortholog_cluster=OG0001437;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_16 Pfam protein_match 650680 651831 . + . Parent=LTnewLM_160022400.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_16 Pfam protein_match 650704 651135 . + . Parent=LTnewLM_160022400.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_16 Liftoff gene 655760 656611 . + . ID=LTnewLM_160022500;coverage=1.0;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1590_0 LTnewLM_16 Liftoff mRNA 655760 656611 . + . ID=LTnewLM_160022500.1;Parent=LTnewLM_160022500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_16 Liftoff CDS 655760 656611 . + 0 ID=LTnewLM_160022500.1:CDS:1;Parent=LTnewLM_160022500.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 655760 656611 . + . ID=LTnewLM_160022500.1:pep;Derives_from=LTnewLM_160022500.1;orthologous_to=LmjF.16.1590_mRNA;ortholog_cluster=OG0001438;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_16 Pfam protein_match 656171 656371 . + . Parent=LTnewLM_160022500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_16 AUGUSTUS gene 657686 659593 1 + . ID=LTnewLM_160022600 LTnewLM_16 AUGUSTUS mRNA 657686 659593 1 + . ID=LTnewLM_160022600.1;Parent=LTnewLM_160022600 LTnewLM_16 AUGUSTUS CDS 657686 659593 1 + 0 ID=LTnewLM_160022600.1:CDS:1;Parent=LTnewLM_160022600.1 ### LTnewLM_16 . polypeptide 657686 659593 . + . ID=LTnewLM_160022600.1:pep;Derives_from=LTnewLM_160022600.1;orthologous_to=LmjF.16.1600_mRNA;ortholog_cluster=OG0001439;product=term%3DMIF4G domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02854;Ontology_term=GO:0003723,GO:0005515 LTnewLM_16 Pfam protein_match 657866 658531 . + . Parent=LTnewLM_160022600.1:pep;Name=PF02854;signature_desc=MIF4G domain;Ontology_term=GO:0003723,GO:0005515 ### LTnewLM_16 AUGUSTUS gene 661669 662475 1 + . ID=LTnewLM_160022700 LTnewLM_16 AUGUSTUS mRNA 661669 662475 1 + . ID=LTnewLM_160022700.1;Parent=LTnewLM_160022700 LTnewLM_16 AUGUSTUS CDS 661669 662475 1 + 0 ID=LTnewLM_160022700.1:CDS:1;Parent=LTnewLM_160022700.1 ### LTnewLM_16 . polypeptide 661669 662475 . + . ID=LTnewLM_160022700.1:pep;Derives_from=LTnewLM_160022700.1;orthologous_to=LmjF.16.1610_mRNA;ortholog_cluster=OG0001440;product=term%3DSPFH domain / Band 7 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01145 LTnewLM_16 Pfam protein_match 661741 662301 . + . Parent=LTnewLM_160022700.1:pep;Name=PF01145;signature_desc=SPFH domain / Band 7 family ### LTnewLM_16 AUGUSTUS gene 663908 665263 1 + . ID=LTnewLM_160022800 LTnewLM_16 AUGUSTUS mRNA 663908 665263 1 + . ID=LTnewLM_160022800.1;Parent=LTnewLM_160022800 LTnewLM_16 AUGUSTUS CDS 663908 665263 1 + 0 ID=LTnewLM_160022800.1:CDS:1;Parent=LTnewLM_160022800.1 ### LTnewLM_16 . polypeptide 663908 665263 . + . ID=LTnewLM_160022800.1:pep;Derives_from=LTnewLM_160022800.1;orthologous_to=LmjF.16.1620_mRNA;ortholog_cluster=OG0001441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 666052 666771 1 + . ID=LTnewLM_160022900 LTnewLM_16 AUGUSTUS mRNA 666052 666771 1 + . ID=LTnewLM_160022900.1;Parent=LTnewLM_160022900 LTnewLM_16 AUGUSTUS CDS 666052 666771 1 + 0 ID=LTnewLM_160022900.1:CDS:1;Parent=LTnewLM_160022900.1 ### LTnewLM_16 . polypeptide 666052 666771 . + . ID=LTnewLM_160022900.1:pep;Derives_from=LTnewLM_160022900.1;orthologous_to=LmjF.16.1630_mRNA;ortholog_cluster=OG0001442;product=term%3DsnoRNA binding domain%2C fibrillarin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01798 LTnewLM_16 Pfam protein_match 666058 666420 . + . Parent=LTnewLM_160022900.1:pep;Name=PF01798;signature_desc=snoRNA binding domain%2C fibrillarin ### LTnewLM_16 AUGUSTUS gene 667988 673443 0.6 + . ID=LTnewLM_160023000 LTnewLM_16 AUGUSTUS mRNA 667988 673443 0.6 + . ID=LTnewLM_160023000.1;Parent=LTnewLM_160023000 LTnewLM_16 AUGUSTUS CDS 667988 668500 0.98 + 0 ID=LTnewLM_160023000.1:CDS:1;Parent=LTnewLM_160023000.1 LTnewLM_16 AUGUSTUS CDS 668548 673443 0.6 + 0 ID=LTnewLM_160023000.1:CDS:2;Parent=LTnewLM_160023000.1 ### LTnewLM_16 . polypeptide 667988 673443 . + . ID=LTnewLM_160023000.1:pep;Derives_from=LTnewLM_160023000.1;orthologous_to=LmjF.16.1640_mRNA;ortholog_cluster=OG0001443;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_16 AUGUSTUS gene 675669 677741 1 + . ID=LTnewLM_160023100 LTnewLM_16 AUGUSTUS mRNA 675669 677741 1 + . ID=LTnewLM_160023100.1;Parent=LTnewLM_160023100 LTnewLM_16 AUGUSTUS CDS 675669 677741 1 + 0 ID=LTnewLM_160023100.1:CDS:1;Parent=LTnewLM_160023100.1 ### LTnewLM_16 . polypeptide 675669 677741 . + . ID=LTnewLM_160023100.1:pep;Derives_from=LTnewLM_160023100.1;orthologous_to=LmjF.16.1650_mRNA;ortholog_cluster=OG0001444;product=term%3DClustered mitochondria%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13236 LTnewLM_16 Pfam protein_match 675720 676073 . + . Parent=LTnewLM_160023100.1:pep;Name=PF13236;signature_desc=Clustered mitochondria ### LTnewLM_16 . pseudogene 680721 693999 . + . ID=LTnewLM_160023200:pseudogene;coverage=0.998;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.16.1660_0;has_internal_stop=true LTnewLM_16 . pseudogenic_transcript 680721 693999 . + . ID=LTnewLM_160023200.1;Parent=LTnewLM_160023200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_16 . pseudogenic_exon 680721 693999 . + . ID=LTnewLM_160023200.1:pseudogenic_exon:1;Parent=LTnewLM_160023200.1;extra_copy_number=0 ### LTnewLM_16 . polypeptide 680721 693999 . + . ID=LTnewLM_160023200.1:pep;Derives_from=LTnewLM_160023200.1;orthologous_to=LmjF.16.1660_mRNA;ortholog_cluster=OG0007475;product=term%3DClustered mitochondria%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13236 LTnewLM_16 Pfam protein_match 680826 681275 . + . Parent=LTnewLM_160023200.1:pep;Name=PF13236;signature_desc=Clustered mitochondria ### LTnewLM_16 AUGUSTUS gene 694918 695334 1 + . ID=LTnewLM_160023300 LTnewLM_16 AUGUSTUS mRNA 694918 695334 1 + . ID=LTnewLM_160023300.1;Parent=LTnewLM_160023300 LTnewLM_16 AUGUSTUS CDS 694918 695334 1 + 0 ID=LTnewLM_160023300.1:CDS:1;Parent=LTnewLM_160023300.1 ### LTnewLM_16 . polypeptide 694918 695334 . + . ID=LTnewLM_160023300.1:pep;Derives_from=LTnewLM_160023300.1;product=term%3DSedlin%2C N-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04628;Ontology_term=GO:0005622,GO:0006888 LTnewLM_16 Pfam protein_match 694939 695322 . + . Parent=LTnewLM_160023300.1:pep;Name=PF04628;signature_desc=Sedlin%2C N-terminal conserved region;Ontology_term=GO:0006888,GO:0005622 ### LTnewLM_17 AUGUSTUS gene 1 1897 0.95 + . ID=LTnewLM_170005000;fiveEndPartial=true;Start_range=.,. LTnewLM_17 AUGUSTUS mRNA 1 1897 0.95 + . ID=LTnewLM_170005000.1;Parent=LTnewLM_170005000 LTnewLM_17 AUGUSTUS CDS 1431 1897 0.95 + 2 ID=LTnewLM_170005000.1:CDS:1;Parent=LTnewLM_170005000.1 ### LTnewLM_17 . contig 1 691904 . + . Name=LTnewLM_CTG000016 LTnewLM_17 . polypeptide 1431 1897 . + . ID=LTnewLM_170005000.1:pep;Derives_from=LTnewLM_170005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 6505 8829 1 - . ID=LTnewLM_170005100 LTnewLM_17 AUGUSTUS mRNA 6505 8829 1 - . ID=LTnewLM_170005100.1;Parent=LTnewLM_170005100 LTnewLM_17 AUGUSTUS CDS 6505 8829 1 - 0 ID=LTnewLM_170005100.1:CDS:1;Parent=LTnewLM_170005100.1 ### LTnewLM_17 . polypeptide 6505 8829 . - . ID=LTnewLM_170005100.1:pep;Derives_from=LTnewLM_170005100.1;orthologous_to=LmjF.17.0010_mRNA;ortholog_cluster=OG0001445;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 9892 10386 1 - . ID=LTnewLM_170005200 LTnewLM_17 AUGUSTUS mRNA 9892 10386 1 - . ID=LTnewLM_170005200.1;Parent=LTnewLM_170005200 LTnewLM_17 AUGUSTUS CDS 9892 10386 1 - 0 ID=LTnewLM_170005200.1:CDS:1;Parent=LTnewLM_170005200.1 ### LTnewLM_17 . polypeptide 9892 10386 . - . ID=LTnewLM_170005200.1:pep;Derives_from=LTnewLM_170005200.1;product=term%3DARMET%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10208 LTnewLM_17 Pfam protein_match 10069 10176 . - . Parent=LTnewLM_170005200.1:pep;Name=PF10208;signature_desc=ARMET%2C C-terminal ### LTnewLM_17 AUGUSTUS gene 11103 11768 1 - . ID=LTnewLM_170005300 LTnewLM_17 AUGUSTUS mRNA 11103 11768 1 - . ID=LTnewLM_170005300.1;Parent=LTnewLM_170005300 LTnewLM_17 AUGUSTUS CDS 11103 11768 1 - 0 ID=LTnewLM_170005300.1:CDS:1;Parent=LTnewLM_170005300.1 ### LTnewLM_17 . polypeptide 11103 11768 . - . ID=LTnewLM_170005300.1:pep;Derives_from=LTnewLM_170005300.1;orthologous_to=LmjF.17.0020_mRNA;ortholog_cluster=OG0001446;product=term%3DProtein of unknown function (DUF3522)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12036 LTnewLM_17 Pfam protein_match 11220 11744 . - . Parent=LTnewLM_170005300.1:pep;Name=PF12036;signature_desc=Protein of unknown function (DUF3522) ### LTnewLM_17 AUGUSTUS gene 12528 13205 1 - . ID=LTnewLM_170005400 LTnewLM_17 AUGUSTUS mRNA 12528 13205 1 - . ID=LTnewLM_170005400.1;Parent=LTnewLM_170005400 LTnewLM_17 AUGUSTUS CDS 12528 13205 1 - 0 ID=LTnewLM_170005400.1:CDS:1;Parent=LTnewLM_170005400.1 ### LTnewLM_17 . polypeptide 12528 13205 . - . ID=LTnewLM_170005400.1:pep;Derives_from=LTnewLM_170005400.1;orthologous_to=LmjF.17.0025_mRNA;ortholog_cluster=OG0001447;product=term%3DProtein of unknown function (DUF3522)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12036 LTnewLM_17 Pfam protein_match 12651 13178 . - . Parent=LTnewLM_170005400.1:pep;Name=PF12036;signature_desc=Protein of unknown function (DUF3522) ### LTnewLM_17 AUGUSTUS gene 14895 15530 1 - . ID=LTnewLM_170005500 LTnewLM_17 AUGUSTUS mRNA 14895 15530 1 - . ID=LTnewLM_170005500.1;Parent=LTnewLM_170005500 LTnewLM_17 AUGUSTUS CDS 14895 15530 1 - 0 ID=LTnewLM_170005500.1:CDS:1;Parent=LTnewLM_170005500.1 ### LTnewLM_17 . polypeptide 14895 15530 . - . ID=LTnewLM_170005500.1:pep;Derives_from=LTnewLM_170005500.1;orthologous_to=LmjF.17.0030_mRNA;ortholog_cluster=OG0001448;product=term%3DAnaphase-promoting complex subunit 11 RING-H2 finger/Ring finger domain/RING-like zinc finger/RING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12861|Pfam:PF13639|Pfam:PF17123|Pfam:PF13445|Pfam:PF00097|Pfam:PF13923;Ontology_term=GO:0008270,GO:0005680,GO:0005515,GO:0046872,GO:0004842 LTnewLM_17 Pfam protein_match 15174 15293 . - . Parent=LTnewLM_170005500.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_17 Pfam protein_match 15174 15293 . - . Parent=LTnewLM_170005500.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_17 Pfam protein_match 15174 15296 . - . Parent=LTnewLM_170005500.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_17 Pfam protein_match 15174 15299 . - . Parent=LTnewLM_170005500.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_17 Pfam protein_match 15180 15293 . - . Parent=LTnewLM_170005500.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_17 Pfam protein_match 15213 15293 . - . Parent=LTnewLM_170005500.1:pep;Name=PF17123;signature_desc=RING-like zinc finger ### LTnewLM_17 AUGUSTUS gene 16359 17147 1 - . ID=LTnewLM_170005600 LTnewLM_17 AUGUSTUS mRNA 16359 17147 1 - . ID=LTnewLM_170005600.1;Parent=LTnewLM_170005600 LTnewLM_17 AUGUSTUS CDS 16359 17147 1 - 0 ID=LTnewLM_170005600.1:CDS:1;Parent=LTnewLM_170005600.1 ### LTnewLM_17 . polypeptide 16359 17147 . - . ID=LTnewLM_170005600.1:pep;Derives_from=LTnewLM_170005600.1;orthologous_to=LmjF.17.0040_mRNA;ortholog_cluster=OG0001449;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_17 Pfam protein_match 16749 16889 . - . Parent=LTnewLM_170005600.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_17 AUGUSTUS gene 17925 18638 1 - . ID=LTnewLM_170005700 LTnewLM_17 AUGUSTUS mRNA 17925 18638 1 - . ID=LTnewLM_170005700.1;Parent=LTnewLM_170005700 LTnewLM_17 AUGUSTUS CDS 17925 18638 1 - 0 ID=LTnewLM_170005700.1:CDS:1;Parent=LTnewLM_170005700.1 ### LTnewLM_17 . polypeptide 17925 18638 . - . ID=LTnewLM_170005700.1:pep;Derives_from=LTnewLM_170005700.1;orthologous_to=LmjF.17.0050_mRNA;ortholog_cluster=OG0001450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 20202 21863 1 - . ID=LTnewLM_170005800 LTnewLM_17 AUGUSTUS mRNA 20202 21863 1 - . ID=LTnewLM_170005800.1;Parent=LTnewLM_170005800 LTnewLM_17 AUGUSTUS CDS 20202 21863 1 - 0 ID=LTnewLM_170005800.1:CDS:1;Parent=LTnewLM_170005800.1 ### LTnewLM_17 . polypeptide 20202 21863 . - . ID=LTnewLM_170005800.1:pep;Derives_from=LTnewLM_170005800.1;orthologous_to=LmjF.17.0060_mRNA;ortholog_cluster=OG0001451;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_17 Pfam protein_match 21012 21779 . - . Parent=LTnewLM_170005800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 21036 21773 . - . Parent=LTnewLM_170005800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_17 AUGUSTUS gene 22967 23530 1 - . ID=LTnewLM_170005900 LTnewLM_17 AUGUSTUS mRNA 22967 23530 1 - . ID=LTnewLM_170005900.1;Parent=LTnewLM_170005900 LTnewLM_17 AUGUSTUS CDS 22967 23530 1 - 0 ID=LTnewLM_170005900.1:CDS:1;Parent=LTnewLM_170005900.1 ### LTnewLM_17 . polypeptide 22967 23530 . - . ID=LTnewLM_170005900.1:pep;Derives_from=LTnewLM_170005900.1;orthologous_to=LmjF.17.0070_mRNA;ortholog_cluster=OG0001452;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Gtr1/RagA G protein conserved region/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF04670|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_17 Pfam protein_match 22997 23464 . - . Parent=LTnewLM_170005900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_17 Pfam protein_match 22997 23482 . - . Parent=LTnewLM_170005900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 23093 23473 . - . Parent=LTnewLM_170005900.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_17 Pfam protein_match 23138 23467 . - . Parent=LTnewLM_170005900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_17 Pfam protein_match 23165 23467 . - . Parent=LTnewLM_170005900.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 23225 23467 . - . Parent=LTnewLM_170005900.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 ### LTnewLM_17 AUGUSTUS gene 25454 26803 1 - . ID=LTnewLM_170006000 LTnewLM_17 AUGUSTUS mRNA 25454 26803 1 - . ID=LTnewLM_170006000.1;Parent=LTnewLM_170006000 LTnewLM_17 AUGUSTUS CDS 25454 26803 1 - 0 ID=LTnewLM_170006000.1:CDS:1;Parent=LTnewLM_170006000.1 ### LTnewLM_17 . polypeptide 25454 26803 . - . ID=LTnewLM_170006000.1:pep;Derives_from=LTnewLM_170006000.1;orthologous_to=LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 25520 25840 . - . Parent=LTnewLM_170006000.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 25865 26062 . - . Parent=LTnewLM_170006000.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 26141 26785 . - . Parent=LTnewLM_170006000.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 . pseudogene 27640 28990 2.5e+03 - . ID=LTnewLM_170006100:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.17.0080:mRNA 1 450;original_prot_length=450 LTnewLM_17 . pseudogenic_transcript 27640 28990 . - . ID=LTnewLM_170006100.1;Parent=LTnewLM_170006100:pseudogene LTnewLM_17 . pseudogenic_exon 27640 27957 . - . ID=LTnewLM_170006100.1:pseudogenic_exon:1;Parent=LTnewLM_170006100.1 LTnewLM_17 . pseudogenic_exon 27959 28990 . - . ID=LTnewLM_170006100.1:pseudogenic_exon:2;Parent=LTnewLM_170006100.1 ### LTnewLM_17 . polypeptide 27640 28990 . - . ID=LTnewLM_170006100.1:pep;Derives_from=LTnewLM_170006100.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 27707 28027 . - . Parent=LTnewLM_170006100.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 28052 28249 . - . Parent=LTnewLM_170006100.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 28328 28972 . - . Parent=LTnewLM_170006100.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 29827 31176 1 - . ID=LTnewLM_170006200 LTnewLM_17 AUGUSTUS mRNA 29827 31176 1 - . ID=LTnewLM_170006200.1;Parent=LTnewLM_170006200 LTnewLM_17 AUGUSTUS CDS 29827 31176 1 - 0 ID=LTnewLM_170006200.1:CDS:1;Parent=LTnewLM_170006200.1 ### LTnewLM_17 . polypeptide 29827 31176 . - . ID=LTnewLM_170006200.1:pep;Derives_from=LTnewLM_170006200.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 29893 30213 . - . Parent=LTnewLM_170006200.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 30238 30435 . - . Parent=LTnewLM_170006200.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 30514 31158 . - . Parent=LTnewLM_170006200.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 32019 33368 1 - . ID=LTnewLM_170006300 LTnewLM_17 AUGUSTUS mRNA 32019 33368 1 - . ID=LTnewLM_170006300.1;Parent=LTnewLM_170006300 LTnewLM_17 AUGUSTUS CDS 32019 33368 1 - 0 ID=LTnewLM_170006300.1:CDS:1;Parent=LTnewLM_170006300.1 ### LTnewLM_17 . polypeptide 32019 33368 . - . ID=LTnewLM_170006300.1:pep;Derives_from=LTnewLM_170006300.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 32085 32405 . - . Parent=LTnewLM_170006300.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 32430 32627 . - . Parent=LTnewLM_170006300.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 32706 33350 . - . Parent=LTnewLM_170006300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 34205 35554 1 - . ID=LTnewLM_170006400 LTnewLM_17 AUGUSTUS mRNA 34205 35554 1 - . ID=LTnewLM_170006400.1;Parent=LTnewLM_170006400 LTnewLM_17 AUGUSTUS CDS 34205 35554 1 - 0 ID=LTnewLM_170006400.1:CDS:1;Parent=LTnewLM_170006400.1 ### LTnewLM_17 . polypeptide 34205 35554 . - . ID=LTnewLM_170006400.1:pep;Derives_from=LTnewLM_170006400.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 34271 34591 . - . Parent=LTnewLM_170006400.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 34616 34813 . - . Parent=LTnewLM_170006400.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 34892 35536 . - . Parent=LTnewLM_170006400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 36387 37736 1 - . ID=LTnewLM_170006500 LTnewLM_17 AUGUSTUS mRNA 36387 37736 1 - . ID=LTnewLM_170006500.1;Parent=LTnewLM_170006500 LTnewLM_17 AUGUSTUS CDS 36387 37736 1 - 0 ID=LTnewLM_170006500.1:CDS:1;Parent=LTnewLM_170006500.1 ### LTnewLM_17 . polypeptide 36387 37736 . - . ID=LTnewLM_170006500.1:pep;Derives_from=LTnewLM_170006500.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 36453 36773 . - . Parent=LTnewLM_170006500.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 36798 36995 . - . Parent=LTnewLM_170006500.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 37074 37718 . - . Parent=LTnewLM_170006500.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 38572 39921 1 - . ID=LTnewLM_170006600 LTnewLM_17 AUGUSTUS mRNA 38572 39921 1 - . ID=LTnewLM_170006600.1;Parent=LTnewLM_170006600 LTnewLM_17 AUGUSTUS CDS 38572 39921 1 - 0 ID=LTnewLM_170006600.1:CDS:1;Parent=LTnewLM_170006600.1 ### LTnewLM_17 . polypeptide 38572 39921 . - . ID=LTnewLM_170006600.1:pep;Derives_from=LTnewLM_170006600.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 38638 38958 . - . Parent=LTnewLM_170006600.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 38983 39180 . - . Parent=LTnewLM_170006600.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 39259 39903 . - . Parent=LTnewLM_170006600.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 40756 42105 1 - . ID=LTnewLM_170006700 LTnewLM_17 AUGUSTUS mRNA 40756 42105 1 - . ID=LTnewLM_170006700.1;Parent=LTnewLM_170006700 LTnewLM_17 AUGUSTUS CDS 40756 42105 1 - 0 ID=LTnewLM_170006700.1:CDS:1;Parent=LTnewLM_170006700.1 ### LTnewLM_17 . polypeptide 40756 42105 . - . ID=LTnewLM_170006700.1:pep;Derives_from=LTnewLM_170006700.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 40822 41142 . - . Parent=LTnewLM_170006700.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 41167 41364 . - . Parent=LTnewLM_170006700.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 41443 42087 . - . Parent=LTnewLM_170006700.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 42937 44286 1 - . ID=LTnewLM_170006800 LTnewLM_17 AUGUSTUS mRNA 42937 44286 1 - . ID=LTnewLM_170006800.1;Parent=LTnewLM_170006800 LTnewLM_17 AUGUSTUS CDS 42937 44286 1 - 0 ID=LTnewLM_170006800.1:CDS:1;Parent=LTnewLM_170006800.1 ### LTnewLM_17 . polypeptide 42937 44286 . - . ID=LTnewLM_170006800.1:pep;Derives_from=LTnewLM_170006800.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006900.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 43003 43323 . - . Parent=LTnewLM_170006800.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 43348 43545 . - . Parent=LTnewLM_170006800.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 43624 44268 . - . Parent=LTnewLM_170006800.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 45123 46472 1 - . ID=LTnewLM_170006900 LTnewLM_17 AUGUSTUS mRNA 45123 46472 1 - . ID=LTnewLM_170006900.1;Parent=LTnewLM_170006900 LTnewLM_17 AUGUSTUS CDS 45123 46472 1 - 0 ID=LTnewLM_170006900.1:CDS:1;Parent=LTnewLM_170006900.1 ### LTnewLM_17 . polypeptide 45123 46472 . - . ID=LTnewLM_170006900.1:pep;Derives_from=LTnewLM_170006900.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170007000.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 45189 45509 . - . Parent=LTnewLM_170006900.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 45534 45731 . - . Parent=LTnewLM_170006900.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 45810 46454 . - . Parent=LTnewLM_170006900.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 47308 48657 1 - . ID=LTnewLM_170007000 LTnewLM_17 AUGUSTUS mRNA 47308 48657 1 - . ID=LTnewLM_170007000.1;Parent=LTnewLM_170007000 LTnewLM_17 AUGUSTUS CDS 47308 48657 1 - 0 ID=LTnewLM_170007000.1:CDS:1;Parent=LTnewLM_170007000.1 ### LTnewLM_17 . polypeptide 47308 48657 . - . ID=LTnewLM_170007000.1:pep;Derives_from=LTnewLM_170007000.1;orthologous_to=LTnewLM_170006000.1,LTnewLM_170006100.1,LTnewLM_170006200.1,LTnewLM_170006300.1,LTnewLM_170006400.1,LTnewLM_170006500.1,LTnewLM_170006600.1,LTnewLM_170006700.1,LTnewLM_170006800.1,LTnewLM_170006900.1,LmjF.17.0080_mRNA,LmjF.17.0081_mRNA,LmjF.17.0082_mRNA,LmjF.17.0083_mRNA,LmjF.17.0084_mRNA,LmjF.17.0085_mRNA,LmjF.17.0086_mRNA;ortholog_cluster=OG0000005;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_17 Pfam protein_match 47374 47694 . - . Parent=LTnewLM_170007000.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 47719 47916 . - . Parent=LTnewLM_170007000.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_17 Pfam protein_match 47995 48639 . - . Parent=LTnewLM_170007000.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_17 AUGUSTUS gene 53057 57197 0.43 - . ID=LTnewLM_170007100 LTnewLM_17 AUGUSTUS mRNA 53057 57197 0.43 - . ID=LTnewLM_170007100.1;Parent=LTnewLM_170007100 LTnewLM_17 AUGUSTUS CDS 53057 53839 0.62 - 0 ID=LTnewLM_170007100.1:CDS:1;Parent=LTnewLM_170007100.1 LTnewLM_17 AUGUSTUS CDS 53919 57197 0.43 - 0 ID=LTnewLM_170007100.1:CDS:2;Parent=LTnewLM_170007100.1 ### LTnewLM_17 . polypeptide 53057 57197 . - . ID=LTnewLM_170007100.1:pep;Derives_from=LTnewLM_170007100.1;orthologous_to=LmjF.17.0200_mRNA;ortholog_cluster=OG0001453;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 53919 54416 . - . Parent=LTnewLM_170007100.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 . pseudogene 60367 60654 447 + . ID=LTnewLM_170007200:pseudogene;has_internal_stop=true;has_frameshift=false;has_stop=true;Target=LmjF.27.1740:mRNA 4 100;original_prot_length=100 LTnewLM_17 . pseudogenic_transcript 60367 60654 . + . ID=LTnewLM_170007200.1;Parent=LTnewLM_170007200:pseudogene LTnewLM_17 . pseudogenic_exon 60367 60654 . + . ID=LTnewLM_170007200.1:pseudogenic_exon:1;Parent=LTnewLM_170007200.1 ### LTnewLM_17 . polypeptide 60367 60654 . + . ID=LTnewLM_170007200.1:pep;Derives_from=LTnewLM_170007200.1;orthologous_to=LTnewLM_270023600.1,LmjF.27.1740_mRNA;ortholog_cluster=OG0000516;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 61032 61375 0.77 - . ID=LTnewLM_170007300 LTnewLM_17 AUGUSTUS mRNA 61032 61375 0.77 - . ID=LTnewLM_170007300.1;Parent=LTnewLM_170007300 LTnewLM_17 AUGUSTUS CDS 61032 61239 0.77 - 1 ID=LTnewLM_170007300.1:CDS:1;Parent=LTnewLM_170007300.1 LTnewLM_17 AUGUSTUS CDS 61344 61375 0.97 - 0 ID=LTnewLM_170007300.1:CDS:2;Parent=LTnewLM_170007300.1 ### LTnewLM_17 . polypeptide 61032 61375 . - . ID=LTnewLM_170007300.1:pep;Derives_from=LTnewLM_170007300.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 65458 69702 1 - . ID=LTnewLM_170007400 LTnewLM_17 AUGUSTUS mRNA 65458 69702 1 - . ID=LTnewLM_170007400.1;Parent=LTnewLM_170007400 LTnewLM_17 AUGUSTUS CDS 65458 69702 1 - 0 ID=LTnewLM_170007400.1:CDS:1;Parent=LTnewLM_170007400.1 ### LTnewLM_17 . polypeptide 65458 69702 . - . ID=LTnewLM_170007400.1:pep;Derives_from=LTnewLM_170007400.1;orthologous_to=LmjF.17.0190_mRNA,LmjF.17.0230_mRNA,LmjF.17.0235_mRNA,LmjF.17.0237_mRNA,LmjF.36.3180_mRNA;ortholog_cluster=OG0000058;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 66241 66858 . - . Parent=LTnewLM_170007400.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 . pseudogene 74602 78552 3.76e+03 - . ID=LTnewLM_170007500:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.17.0200:mRNA 7 1325;original_prot_length=1378 LTnewLM_17 . pseudogenic_transcript 74602 78552 . - . ID=LTnewLM_170007500.1;Parent=LTnewLM_170007500:pseudogene LTnewLM_17 . pseudogenic_exon 74602 76986 . - . ID=LTnewLM_170007500.1:pseudogenic_exon:1;Parent=LTnewLM_170007500.1 LTnewLM_17 . pseudogenic_exon 76989 77432 . - . ID=LTnewLM_170007500.1:pseudogenic_exon:2;Parent=LTnewLM_170007500.1 LTnewLM_17 . pseudogenic_exon 77435 77482 . - . ID=LTnewLM_170007500.1:pseudogenic_exon:3;Parent=LTnewLM_170007500.1 LTnewLM_17 . pseudogenic_exon 77484 77861 . - . ID=LTnewLM_170007500.1:pseudogenic_exon:4;Parent=LTnewLM_170007500.1 LTnewLM_17 . pseudogenic_exon 77863 78552 . - . ID=LTnewLM_170007500.1:pseudogenic_exon:5;Parent=LTnewLM_170007500.1 ### LTnewLM_17 . polypeptide 74602 78552 . - . ID=LTnewLM_170007500.1:pep;Derives_from=LTnewLM_170007500.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 75190 75807 . - . Parent=LTnewLM_170007500.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 AUGUSTUS gene 80356 84346 0.51 - . ID=LTnewLM_170007600 LTnewLM_17 AUGUSTUS mRNA 80356 84346 0.51 - . ID=LTnewLM_170007600.1;Parent=LTnewLM_170007600 LTnewLM_17 AUGUSTUS CDS 80356 80489 0.51 - 2 ID=LTnewLM_170007600.1:CDS:1;Parent=LTnewLM_170007600.1 LTnewLM_17 AUGUSTUS CDS 80542 84346 0.99 - 0 ID=LTnewLM_170007600.1:CDS:2;Parent=LTnewLM_170007600.1 ### LTnewLM_17 . polypeptide 80356 84346 . - . ID=LTnewLM_170007600.1:pep;Derives_from=LTnewLM_170007600.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 80924 81541 . - . Parent=LTnewLM_170007600.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 . pseudogene 86113 91105 . - . ID=LTnewLM_170007700:pseudogene;coverage=0.992;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0237_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 86113 91105 . - . ID=LTnewLM_170007700.1;Parent=LTnewLM_170007700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 86113 91105 . - . ID=LTnewLM_170007700.1:pseudogenic_exon:1;Parent=LTnewLM_170007700.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 86113 91105 . - . ID=LTnewLM_170007700.1:pep;Derives_from=LTnewLM_170007700.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007800.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 91842 95834 1 - . ID=LTnewLM_170007800 LTnewLM_17 AUGUSTUS mRNA 91842 95834 1 - . ID=LTnewLM_170007800.1;Parent=LTnewLM_170007800 LTnewLM_17 AUGUSTUS CDS 91842 95834 1 - 0 ID=LTnewLM_170007800.1:CDS:1;Parent=LTnewLM_170007800.1 ### LTnewLM_17 . polypeptide 91842 95834 . - . ID=LTnewLM_170007800.1:pep;Derives_from=LTnewLM_170007800.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007900.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 92412 93029 . - . Parent=LTnewLM_170007800.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 AUGUSTUS gene 97553 101546 0.47 - . ID=LTnewLM_170007900 LTnewLM_17 AUGUSTUS mRNA 97553 101546 0.47 - . ID=LTnewLM_170007900.1;Parent=LTnewLM_170007900 LTnewLM_17 AUGUSTUS CDS 97553 99774 0.75 - 2 ID=LTnewLM_170007900.1:CDS:1;Parent=LTnewLM_170007900.1 LTnewLM_17 AUGUSTUS CDS 100139 101546 0.47 - 0 ID=LTnewLM_170007900.1:CDS:2;Parent=LTnewLM_170007900.1 ### LTnewLM_17 . polypeptide 97553 101546 . - . ID=LTnewLM_170007900.1:pep;Derives_from=LTnewLM_170007900.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_360041800.1;ortholog_cluster=OG0000015;product=term%3DAdenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00211;Ontology_term=GO:0016849,GO:0009190,GO:0035556 LTnewLM_17 Pfam protein_match 98487 99104 . - . Parent=LTnewLM_170007900.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_17 . pseudogene 104345 106350 . - . ID=LTnewLM_170008000:pseudogene;coverage=0.998;sequence_ID=0.918;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0100_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 104345 106350 . - . ID=LTnewLM_170008000.1;Parent=LTnewLM_170008000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 104345 106350 . - . ID=LTnewLM_170008000.1:pseudogenic_exon:1;Parent=LTnewLM_170008000.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 104345 106350 . - . ID=LTnewLM_170008000.1:pep;Derives_from=LTnewLM_170008000.1;orthologous_to=LmjF.17.0100_mRNA;ortholog_cluster=OG0007476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 Liftoff gene 107156 108739 . - . ID=LTnewLM_170008100;coverage=1.0;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0110_0 LTnewLM_17 Liftoff mRNA 107156 108739 . - . ID=LTnewLM_170008100.1;Parent=LTnewLM_170008100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 107156 108739 . - 0 ID=LTnewLM_170008100.1:CDS:1;Parent=LTnewLM_170008100.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 107156 108739 . - . ID=LTnewLM_170008100.1:pep;Derives_from=LTnewLM_170008100.1;orthologous_to=LmjF.17.0110_mRNA;ortholog_cluster=OG0001454;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 110574 111527 1 - . ID=LTnewLM_170008200 LTnewLM_17 AUGUSTUS mRNA 110574 111527 1 - . ID=LTnewLM_170008200.1;Parent=LTnewLM_170008200 LTnewLM_17 AUGUSTUS CDS 110574 111527 1 - 0 ID=LTnewLM_170008200.1:CDS:1;Parent=LTnewLM_170008200.1 ### LTnewLM_17 . polypeptide 110574 111527 . - . ID=LTnewLM_170008200.1:pep;Derives_from=LTnewLM_170008200.1;orthologous_to=LmjF.17.0120_mRNA;ortholog_cluster=OG0001455;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 113211 115844 1 - . ID=LTnewLM_170008300 LTnewLM_17 AUGUSTUS mRNA 113211 115844 1 - . ID=LTnewLM_170008300.1;Parent=LTnewLM_170008300 LTnewLM_17 AUGUSTUS CDS 113211 115844 1 - 0 ID=LTnewLM_170008300.1:CDS:1;Parent=LTnewLM_170008300.1 ### LTnewLM_17 . polypeptide 113211 115844 . - . ID=LTnewLM_170008300.1:pep;Derives_from=LTnewLM_170008300.1;orthologous_to=LmjF.17.0130_mRNA;ortholog_cluster=OG0001456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 118975 120246 1 - . ID=LTnewLM_170008400 LTnewLM_17 AUGUSTUS mRNA 118975 120246 1 - . ID=LTnewLM_170008400.1;Parent=LTnewLM_170008400 LTnewLM_17 AUGUSTUS CDS 118975 120246 1 - 0 ID=LTnewLM_170008400.1:CDS:1;Parent=LTnewLM_170008400.1 ### LTnewLM_17 . polypeptide 118975 120246 . - . ID=LTnewLM_170008400.1:pep;Derives_from=LTnewLM_170008400.1;orthologous_to=LmjF.17.0140_mRNA;ortholog_cluster=OG0001457;product=term%3DPeptidase family M28/Peptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04389|Pfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_17 Pfam protein_match 119023 119811 . - . Parent=LTnewLM_170008400.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_17 Pfam protein_match 119311 119598 . - . Parent=LTnewLM_170008400.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain LTnewLM_17 Pfam protein_match 119680 119826 . - . Parent=LTnewLM_170008400.1:pep;Name=PF04389;signature_desc=Peptidase family M28 ### LTnewLM_17 AUGUSTUS gene 121828 123891 1 - . ID=LTnewLM_170008500 LTnewLM_17 AUGUSTUS mRNA 121828 123891 1 - . ID=LTnewLM_170008500.1;Parent=LTnewLM_170008500 LTnewLM_17 AUGUSTUS CDS 121828 123891 1 - 0 ID=LTnewLM_170008500.1:CDS:1;Parent=LTnewLM_170008500.1 ### LTnewLM_17 . polypeptide 121828 123891 . - . ID=LTnewLM_170008500.1:pep;Derives_from=LTnewLM_170008500.1;orthologous_to=LmjF.17.0150_mRNA;ortholog_cluster=OG0001458;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 125286 128591 1 - . ID=LTnewLM_170008600 LTnewLM_17 AUGUSTUS mRNA 125286 128591 1 - . ID=LTnewLM_170008600.1;Parent=LTnewLM_170008600 LTnewLM_17 AUGUSTUS CDS 125286 128591 1 - 0 ID=LTnewLM_170008600.1:CDS:1;Parent=LTnewLM_170008600.1 ### LTnewLM_17 . polypeptide 125286 128591 . - . ID=LTnewLM_170008600.1:pep;Derives_from=LTnewLM_170008600.1;orthologous_to=LmjF.17.0160_mRNA;ortholog_cluster=OG0001459;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_17 Pfam protein_match 127239 128399 . - . Parent=LTnewLM_170008600.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_17 Pfam protein_match 128106 128531 . - . Parent=LTnewLM_170008600.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_17 AUGUSTUS gene 132710 134806 1 - . ID=LTnewLM_170008700 LTnewLM_17 AUGUSTUS mRNA 132710 134806 1 - . ID=LTnewLM_170008700.1;Parent=LTnewLM_170008700 LTnewLM_17 AUGUSTUS CDS 132710 134806 1 - 0 ID=LTnewLM_170008700.1:CDS:1;Parent=LTnewLM_170008700.1 ### LTnewLM_17 . polypeptide 132710 134806 . - . ID=LTnewLM_170008700.1:pep;Derives_from=LTnewLM_170008700.1;orthologous_to=LmjF.17.0170_mRNA;ortholog_cluster=OG0001460;product=term%3DWD domain%2C G-beta repeat/WD40-like Beta Propeller Repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF07676;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 133136 133231 . - . Parent=LTnewLM_170008700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 133178 133228 . - . Parent=LTnewLM_170008700.1:pep;Name=PF07676;signature_desc=WD40-like Beta Propeller Repeat LTnewLM_17 Pfam protein_match 133262 133357 . - . Parent=LTnewLM_170008700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 133385 133495 . - . Parent=LTnewLM_170008700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_17 . polypeptide 137428 139887 . - . ID=LTnewLM_170008800.1:pep;Derives_from=LTnewLM_170008800.1;orthologous_to=LTnewLM_170008800.2,LmjF.17.0240_mRNA;ortholog_cluster=OG0000353;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_17 Pfam protein_match 138418 138576 . - . Parent=LTnewLM_170008800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138541 138627 . - . Parent=LTnewLM_170008800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138589 138735 . - . Parent=LTnewLM_170008800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138964 139035 . - . Parent=LTnewLM_170008800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138997 139155 . - . Parent=LTnewLM_170008800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 139171 139401 . - . Parent=LTnewLM_170008800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 139414 139554 . - . Parent=LTnewLM_170008800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_17 AUGUSTUS gene 137428 141210 2 - . ID=LTnewLM_170008800 LTnewLM_17 AUGUSTUS mRNA 137428 139887 1 - . ID=LTnewLM_170008800.1;Parent=LTnewLM_170008800 LTnewLM_17 AUGUSTUS CDS 137428 139887 1 - 0 ID=LTnewLM_170008800.1:CDS:1;Parent=LTnewLM_170008800.1 LTnewLM_17 AUGUSTUS mRNA 137428 141210 1 - . ID=LTnewLM_170008800.2;Parent=LTnewLM_170008800 LTnewLM_17 AUGUSTUS CDS 137428 141210 1 - 0 ID=LTnewLM_170008800.2:CDS:1;Parent=LTnewLM_170008800.2 ### LTnewLM_17 . polypeptide 137428 141210 . - . ID=LTnewLM_170008800.2:pep;Derives_from=LTnewLM_170008800.2;orthologous_to=LTnewLM_170008800.1,LmjF.17.0240_mRNA;ortholog_cluster=OG0000353;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_17 Pfam protein_match 138418 138576 . - . Parent=LTnewLM_170008800.2:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138541 138627 . - . Parent=LTnewLM_170008800.2:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138589 138735 . - . Parent=LTnewLM_170008800.2:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 138997 139155 . - . Parent=LTnewLM_170008800.2:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 139171 139401 . - . Parent=LTnewLM_170008800.2:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_17 Pfam protein_match 139414 139554 . - . Parent=LTnewLM_170008800.2:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_17 AUGUSTUS gene 145052 146131 1 - . ID=LTnewLM_170008900 LTnewLM_17 AUGUSTUS mRNA 145052 146131 1 - . ID=LTnewLM_170008900.1;Parent=LTnewLM_170008900 LTnewLM_17 AUGUSTUS CDS 145052 146131 1 - 0 ID=LTnewLM_170008900.1:CDS:1;Parent=LTnewLM_170008900.1 ### LTnewLM_17 . polypeptide 145052 146131 . - . ID=LTnewLM_170008900.1:pep;Derives_from=LTnewLM_170008900.1;orthologous_to=LmjF.17.0250_mRNA;ortholog_cluster=OG0001461;product=term%3DPyridoxal-phosphate dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00291 LTnewLM_17 Pfam protein_match 145217 146083 . - . Parent=LTnewLM_170008900.1:pep;Name=PF00291;signature_desc=Pyridoxal-phosphate dependent enzyme ### LTnewLM_17 AUGUSTUS gene 147947 150406 1 - . ID=LTnewLM_170009000 LTnewLM_17 AUGUSTUS mRNA 147947 150406 1 - . ID=LTnewLM_170009000.1;Parent=LTnewLM_170009000 LTnewLM_17 AUGUSTUS CDS 147947 150406 1 - 0 ID=LTnewLM_170009000.1:CDS:1;Parent=LTnewLM_170009000.1 ### LTnewLM_17 . polypeptide 147947 150406 . - . ID=LTnewLM_170009000.1:pep;Derives_from=LTnewLM_170009000.1;orthologous_to=LmjF.17.0260_mRNA;ortholog_cluster=OG0001462;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 151137 151991 1 - . ID=LTnewLM_170009100 LTnewLM_17 AUGUSTUS mRNA 151137 151991 1 - . ID=LTnewLM_170009100.1;Parent=LTnewLM_170009100 LTnewLM_17 AUGUSTUS CDS 151137 151991 1 - 0 ID=LTnewLM_170009100.1:CDS:1;Parent=LTnewLM_170009100.1 ### LTnewLM_17 . polypeptide 151137 151991 . - . ID=LTnewLM_170009100.1:pep;Derives_from=LTnewLM_170009100.1;orthologous_to=LmjF.17.0270_mRNA;ortholog_cluster=OG0001463;product=term%3DThioredoxin-like [2Fe-2S] ferredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01257 LTnewLM_17 Pfam protein_match 151308 151766 . - . Parent=LTnewLM_170009100.1:pep;Name=PF01257;signature_desc=Thioredoxin-like [2Fe-2S] ferredoxin ### LTnewLM_17 AUGUSTUS gene 155475 156008 1 - . ID=LTnewLM_170009200 LTnewLM_17 AUGUSTUS mRNA 155475 156008 1 - . ID=LTnewLM_170009200.1;Parent=LTnewLM_170009200 LTnewLM_17 AUGUSTUS CDS 155475 156008 1 - 0 ID=LTnewLM_170009200.1:CDS:1;Parent=LTnewLM_170009200.1 ### LTnewLM_17 . polypeptide 155475 156008 . - . ID=LTnewLM_170009200.1:pep;Derives_from=LTnewLM_170009200.1;orthologous_to=LmjF.17.0280_mRNA;ortholog_cluster=OG0001464;product=term%3DCore histone H2A/H2B/H3/H4/C-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF16211;Ontology_term=GO:0003677 LTnewLM_17 Pfam protein_match 155490 155588 . - . Parent=LTnewLM_170009200.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A LTnewLM_17 Pfam protein_match 155595 155882 . - . Parent=LTnewLM_170009200.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_17 AUGUSTUS gene 157045 159222 1 - . ID=LTnewLM_170009300 LTnewLM_17 AUGUSTUS mRNA 157045 159222 1 - . ID=LTnewLM_170009300.1;Parent=LTnewLM_170009300 LTnewLM_17 AUGUSTUS CDS 157045 159222 1 - 0 ID=LTnewLM_170009300.1:CDS:1;Parent=LTnewLM_170009300.1 ### LTnewLM_17 . polypeptide 157045 159222 . - . ID=LTnewLM_170009300.1:pep;Derives_from=LTnewLM_170009300.1;orthologous_to=LmjF.17.0290_mRNA;ortholog_cluster=OG0001465;product=term%3DZinc finger%2C C3HC4 type (RING finger)/RING-type zinc-finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13445|Pfam:PF13923|Pfam:PF00097;Ontology_term=GO:0046872 LTnewLM_17 Pfam protein_match 159031 159159 . - . Parent=LTnewLM_170009300.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_17 Pfam protein_match 159046 159156 . - . Parent=LTnewLM_170009300.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_17 Pfam protein_match 159046 159156 . - . Parent=LTnewLM_170009300.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_17 Pfam protein_match 159052 159156 . - . Parent=LTnewLM_170009300.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger ### LTnewLM_17 AUGUSTUS gene 160251 161066 1 - . ID=LTnewLM_170009400 LTnewLM_17 AUGUSTUS mRNA 160251 161066 1 - . ID=LTnewLM_170009400.1;Parent=LTnewLM_170009400 LTnewLM_17 AUGUSTUS CDS 160251 161066 1 - 0 ID=LTnewLM_170009400.1:CDS:1;Parent=LTnewLM_170009400.1 ### LTnewLM_17 . polypeptide 160251 161066 . - . ID=LTnewLM_170009400.1:pep;Derives_from=LTnewLM_170009400.1;orthologous_to=LmjF.17.0300_mRNA;ortholog_cluster=OG0001466;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_17 Pfam protein_match 160464 160751 . - . Parent=LTnewLM_170009400.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_17 Liftoff gene 162247 166623 . - . ID=LTnewLM_170009500;coverage=0.999;sequence_ID=0.933;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0310_0 LTnewLM_17 Liftoff mRNA 162247 166623 . - . ID=LTnewLM_170009500.1;Parent=LTnewLM_170009500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 162247 166623 . - 0 ID=LTnewLM_170009500.1:CDS:1;Parent=LTnewLM_170009500.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 162247 166623 . - . ID=LTnewLM_170009500.1:pep;Derives_from=LTnewLM_170009500.1;orthologous_to=LmjF.17.0310_mRNA;ortholog_cluster=OG0001467;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 167998 168981 1 - . ID=LTnewLM_170009600 LTnewLM_17 AUGUSTUS mRNA 167998 168981 1 - . ID=LTnewLM_170009600.1;Parent=LTnewLM_170009600 LTnewLM_17 AUGUSTUS CDS 167998 168981 1 - 0 ID=LTnewLM_170009600.1:CDS:1;Parent=LTnewLM_170009600.1 ### LTnewLM_17 . polypeptide 167998 168981 . - . ID=LTnewLM_170009600.1:pep;Derives_from=LTnewLM_170009600.1;orthologous_to=LmjF.17.0320_mRNA;ortholog_cluster=OG0001468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 169488 174695 1 - . ID=LTnewLM_170009700 LTnewLM_17 AUGUSTUS mRNA 169488 174695 1 - . ID=LTnewLM_170009700.1;Parent=LTnewLM_170009700 LTnewLM_17 AUGUSTUS CDS 169488 174695 1 - 0 ID=LTnewLM_170009700.1:CDS:1;Parent=LTnewLM_170009700.1 ### LTnewLM_17 . polypeptide 169488 174695 . - . ID=LTnewLM_170009700.1:pep;Derives_from=LTnewLM_170009700.1;orthologous_to=LmjF.17.0330_mRNA;ortholog_cluster=OG0001469;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . polypeptide 175503 175937 . - . ID=LTnewLM_170009800.1:pep;Derives_from=LTnewLM_170009800.1;orthologous_to=LTnewLM_170009800.2,LmjF.17.0340.1_mRNA,LmjF.17.0340.2_mRNA;ortholog_cluster=OG0000283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . polypeptide 175503 176177 . - . ID=LTnewLM_170009800.2:pep;Derives_from=LTnewLM_170009800.2;orthologous_to=LTnewLM_170009800.1,LmjF.17.0340.1_mRNA,LmjF.17.0340.2_mRNA;ortholog_cluster=OG0000283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 175503 177126 . - . ID=LTnewLM_170009800:pseudogene;coverage=0.997;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0340_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 175503 176068 . - . ID=LTnewLM_170009800.1;Parent=LTnewLM_170009800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 175503 175937 . - . ID=LTnewLM_170009800.1:pseudogenic_exon:1;Parent=LTnewLM_170009800.1;extra_copy_number=0 LTnewLM_17 . pseudogenic_transcript 175503 177126 . - . ID=LTnewLM_170009800.2;Parent=LTnewLM_170009800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 175503 176177 . - . ID=LTnewLM_170009800.2:pseudogenic_exon:1;Parent=LTnewLM_170009800.2;extra_copy_number=0 ### LTnewLM_17 AUGUSTUS gene 177983 179770 1 - . ID=LTnewLM_170009900 LTnewLM_17 AUGUSTUS mRNA 177983 179770 1 - . ID=LTnewLM_170009900.1;Parent=LTnewLM_170009900 LTnewLM_17 AUGUSTUS CDS 177983 179770 1 - 0 ID=LTnewLM_170009900.1:CDS:1;Parent=LTnewLM_170009900.1 ### LTnewLM_17 . polypeptide 177983 179770 . - . ID=LTnewLM_170009900.1:pep;Derives_from=LTnewLM_170009900.1;orthologous_to=LmjF.17.0350_mRNA;ortholog_cluster=OG0001470;product=term%3DDihydrouridine synthase (Dus)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01207;Ontology_term=GO:0008033,GO:0055114,GO:0050660,GO:0017150 LTnewLM_17 Pfam protein_match 178310 179056 . - . Parent=LTnewLM_170009900.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 ### LTnewLM_17 AUGUSTUS gene 180572 181120 1 - . ID=LTnewLM_170010000 LTnewLM_17 AUGUSTUS mRNA 180572 181120 1 - . ID=LTnewLM_170010000.1;Parent=LTnewLM_170010000 LTnewLM_17 AUGUSTUS CDS 180572 181120 1 - 0 ID=LTnewLM_170010000.1:CDS:1;Parent=LTnewLM_170010000.1 ### LTnewLM_17 . polypeptide 180572 181120 . - . ID=LTnewLM_170010000.1:pep;Derives_from=LTnewLM_170010000.1;orthologous_to=LmjF.17.0360_mRNA;ortholog_cluster=OG0001471;product=term%3DCytidine and deoxycytidylate deaminase zinc-binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08211|Pfam:PF00383;Ontology_term=GO:0009972,GO:0016787,GO:0008270,GO:0004126 LTnewLM_17 Pfam protein_match 180737 181045 . - . Parent=LTnewLM_170010000.1:pep;Name=PF00383;signature_desc=Cytidine and deoxycytidylate deaminase zinc-binding region;Ontology_term=GO:0008270,GO:0016787 LTnewLM_17 Pfam protein_match 180854 181048 . - . Parent=LTnewLM_170010000.1:pep;Name=PF08211;signature_desc=Cytidine and deoxycytidylate deaminase zinc-binding region;Ontology_term=GO:0004126,GO:0008270,GO:0009972 ### LTnewLM_17 AUGUSTUS gene 182616 185018 1 - . ID=LTnewLM_170010100 LTnewLM_17 AUGUSTUS mRNA 182616 185018 1 - . ID=LTnewLM_170010100.1;Parent=LTnewLM_170010100 LTnewLM_17 AUGUSTUS CDS 182616 185018 1 - 0 ID=LTnewLM_170010100.1:CDS:1;Parent=LTnewLM_170010100.1 ### LTnewLM_17 . polypeptide 182616 185018 . - . ID=LTnewLM_170010100.1:pep;Derives_from=LTnewLM_170010100.1;orthologous_to=LmjF.17.0370_mRNA;ortholog_cluster=OG0001472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 186166 186993 1 - . ID=LTnewLM_170010200 LTnewLM_17 AUGUSTUS mRNA 186166 186993 1 - . ID=LTnewLM_170010200.1;Parent=LTnewLM_170010200 LTnewLM_17 AUGUSTUS CDS 186166 186993 1 - 0 ID=LTnewLM_170010200.1:CDS:1;Parent=LTnewLM_170010200.1 ### LTnewLM_17 . polypeptide 186166 186993 . - . ID=LTnewLM_170010200.1:pep;Derives_from=LTnewLM_170010200.1;orthologous_to=LmjF.17.0380_mRNA;ortholog_cluster=OG0001473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 190647 194235 0.64 - . ID=LTnewLM_170010300 LTnewLM_17 AUGUSTUS mRNA 190647 194235 0.64 - . ID=LTnewLM_170010300.1;Parent=LTnewLM_170010300 LTnewLM_17 AUGUSTUS CDS 190647 194122 0.64 - 2 ID=LTnewLM_170010300.1:CDS:1;Parent=LTnewLM_170010300.1 LTnewLM_17 AUGUSTUS CDS 194172 194235 1 - 0 ID=LTnewLM_170010300.1:CDS:2;Parent=LTnewLM_170010300.1 ### LTnewLM_17 . polypeptide 190647 194235 . - . ID=LTnewLM_170010300.1:pep;Derives_from=LTnewLM_170010300.1;orthologous_to=LmjF.17.0390_mRNA;ortholog_cluster=OG0001474;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/ABC1 atypical kinase-like domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF03109|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 190711 191664 . - . Parent=LTnewLM_170010300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 191062 191346 . - . Parent=LTnewLM_170010300.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_17 Pfam protein_match 191065 191667 . - . Parent=LTnewLM_170010300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_17 Pfam protein_match 191200 191454 . - . Parent=LTnewLM_170010300.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_17 . pseudogene 198101 201273 . - . ID=LTnewLM_170010400:pseudogene;coverage=0.995;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0400_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 198101 201273 . - . ID=LTnewLM_170010400.1;Parent=LTnewLM_170010400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 198101 201273 . - . ID=LTnewLM_170010400.1:pseudogenic_exon:1;Parent=LTnewLM_170010400.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 198101 201273 . - . ID=LTnewLM_170010400.1:pep;Derives_from=LTnewLM_170010400.1;orthologous_to=LmjF.17.0400_mRNA;ortholog_cluster=OG0007477;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 206105 209305 1 - . ID=LTnewLM_170010500 LTnewLM_17 AUGUSTUS mRNA 206105 209305 1 - . ID=LTnewLM_170010500.1;Parent=LTnewLM_170010500 LTnewLM_17 AUGUSTUS CDS 206105 209305 1 - 0 ID=LTnewLM_170010500.1:CDS:1;Parent=LTnewLM_170010500.1 ### LTnewLM_17 . polypeptide 206105 209305 . - . ID=LTnewLM_170010500.1:pep;Derives_from=LTnewLM_170010500.1;orthologous_to=LmjF.17.0410_mRNA;ortholog_cluster=OG0001475;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 210379 212072 . - . ID=LTnewLM_170010600:pseudogene;coverage=0.976;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0420_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 210379 212072 . - . ID=LTnewLM_170010600.1;Parent=LTnewLM_170010600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 210379 212072 . - . ID=LTnewLM_170010600.1:pseudogenic_exon:1;Parent=LTnewLM_170010600.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 210379 212072 . - . ID=LTnewLM_170010600.1:pep;Derives_from=LTnewLM_170010600.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 214059 218009 1 - . ID=LTnewLM_170010700 LTnewLM_17 AUGUSTUS mRNA 214059 218009 1 - . ID=LTnewLM_170010700.1;Parent=LTnewLM_170010700 LTnewLM_17 AUGUSTUS CDS 214059 218009 1 - 0 ID=LTnewLM_170010700.1:CDS:1;Parent=LTnewLM_170010700.1 ### LTnewLM_17 . polypeptide 214059 218009 . - . ID=LTnewLM_170010700.1:pep;Derives_from=LTnewLM_170010700.1;orthologous_to=LmjF.17.0430_mRNA;ortholog_cluster=OG0001476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 219948 225803 1 - . ID=LTnewLM_170010800 LTnewLM_17 AUGUSTUS mRNA 219948 225803 1 - . ID=LTnewLM_170010800.1;Parent=LTnewLM_170010800 LTnewLM_17 AUGUSTUS CDS 219948 225803 1 - 0 ID=LTnewLM_170010800.1:CDS:1;Parent=LTnewLM_170010800.1 ### LTnewLM_17 . polypeptide 219948 225803 . - . ID=LTnewLM_170010800.1:pep;Derives_from=LTnewLM_170010800.1;orthologous_to=LmjF.17.0440_mRNA;ortholog_cluster=OG0001477;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 228052 232809 1 - . ID=LTnewLM_170010900 LTnewLM_17 AUGUSTUS mRNA 228052 232809 1 - . ID=LTnewLM_170010900.1;Parent=LTnewLM_170010900 LTnewLM_17 AUGUSTUS CDS 228052 232809 1 - 0 ID=LTnewLM_170010900.1:CDS:1;Parent=LTnewLM_170010900.1 ### LTnewLM_17 . polypeptide 228052 232809 . - . ID=LTnewLM_170010900.1:pep;Derives_from=LTnewLM_170010900.1;orthologous_to=LmjF.17.0450_mRNA;ortholog_cluster=OG0001478;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 234258 235226 1 - . ID=LTnewLM_170011000 LTnewLM_17 AUGUSTUS mRNA 234258 235226 1 - . ID=LTnewLM_170011000.1;Parent=LTnewLM_170011000 LTnewLM_17 AUGUSTUS CDS 234258 235226 1 - 0 ID=LTnewLM_170011000.1:CDS:1;Parent=LTnewLM_170011000.1 ### LTnewLM_17 . polypeptide 234258 235226 . - . ID=LTnewLM_170011000.1:pep;Derives_from=LTnewLM_170011000.1;orthologous_to=LmjF.17.0460_mRNA;ortholog_cluster=OG0001479;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_17 Pfam protein_match 234642 234800 . - . Parent=LTnewLM_170011000.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_17 AUGUSTUS gene 236112 247220 1 - . ID=LTnewLM_170011100 LTnewLM_17 AUGUSTUS mRNA 236112 247220 1 - . ID=LTnewLM_170011100.1;Parent=LTnewLM_170011100 LTnewLM_17 AUGUSTUS CDS 236112 247220 1 - 0 ID=LTnewLM_170011100.1:CDS:1;Parent=LTnewLM_170011100.1 ### LTnewLM_17 . polypeptide 236112 247220 . - . ID=LTnewLM_170011100.1:pep;Derives_from=LTnewLM_170011100.1;orthologous_to=LmjF.17.0470_mRNA;ortholog_cluster=OG0001480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 254146 255751 . - . ID=LTnewLM_170011200:pseudogene;coverage=0.993;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0480_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 254146 255751 . - . ID=LTnewLM_170011200.1;Parent=LTnewLM_170011200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 254146 255751 . - . ID=LTnewLM_170011200.1:pseudogenic_exon:1;Parent=LTnewLM_170011200.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 254146 255751 . - . ID=LTnewLM_170011200.1:pep;Derives_from=LTnewLM_170011200.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 258415 261993 0.86 - . ID=LTnewLM_170011300 LTnewLM_17 AUGUSTUS mRNA 258415 261993 0.86 - . ID=LTnewLM_170011300.1;Parent=LTnewLM_170011300 LTnewLM_17 AUGUSTUS CDS 258415 261993 0.86 - 0 ID=LTnewLM_170011300.1:CDS:1;Parent=LTnewLM_170011300.1 ### LTnewLM_17 . polypeptide 258415 261993 . - . ID=LTnewLM_170011300.1:pep;Derives_from=LTnewLM_170011300.1;orthologous_to=LmjF.17.0490_mRNA;ortholog_cluster=OG0001481;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_17 Pfam protein_match 258490 259371 . - . Parent=LTnewLM_170011300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 258502 258777 . - . Parent=LTnewLM_170011300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_17 Pfam protein_match 258904 259365 . - . Parent=LTnewLM_170011300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_17 AUGUSTUS gene 263960 268240 1 - . ID=LTnewLM_170011400 LTnewLM_17 AUGUSTUS mRNA 263960 268240 1 - . ID=LTnewLM_170011400.1;Parent=LTnewLM_170011400 LTnewLM_17 AUGUSTUS CDS 263960 267717 1 - 2 ID=LTnewLM_170011400.1:CDS:1;Parent=LTnewLM_170011400.1 LTnewLM_17 AUGUSTUS CDS 267952 268240 1 - 0 ID=LTnewLM_170011400.1:CDS:2;Parent=LTnewLM_170011400.1 ### LTnewLM_17 . polypeptide 263960 268240 . - . ID=LTnewLM_170011400.1:pep;Derives_from=LTnewLM_170011400.1;orthologous_to=LmjF.17.0500_mRNA;ortholog_cluster=OG0001482;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 270520 273612 1 - . ID=LTnewLM_170011500 LTnewLM_17 AUGUSTUS mRNA 270520 273612 1 - . ID=LTnewLM_170011500.1;Parent=LTnewLM_170011500 LTnewLM_17 AUGUSTUS CDS 270520 273612 1 - 0 ID=LTnewLM_170011500.1:CDS:1;Parent=LTnewLM_170011500.1 ### LTnewLM_17 . polypeptide 270520 273612 . - . ID=LTnewLM_170011500.1:pep;Derives_from=LTnewLM_170011500.1;orthologous_to=LmjF.17.0510_mRNA;ortholog_cluster=OG0001483;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 Liftoff gene 275544 278327 . - . ID=LTnewLM_170011600;coverage=1.0;sequence_ID=0.924;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0520_0 LTnewLM_17 Liftoff mRNA 275544 278327 . - . ID=LTnewLM_170011600.1;Parent=LTnewLM_170011600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 275544 278327 . - 0 ID=LTnewLM_170011600.1:CDS:1;Parent=LTnewLM_170011600.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 275544 278327 . - . ID=LTnewLM_170011600.1:pep;Derives_from=LTnewLM_170011600.1;orthologous_to=LmjF.17.0520_mRNA;ortholog_cluster=OG0001484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 Liftoff gene 281826 285383 . - . ID=LTnewLM_170011700;coverage=0.994;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0530_0 LTnewLM_17 Liftoff mRNA 281826 285383 . - . ID=LTnewLM_170011700.1;Parent=LTnewLM_170011700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 281826 285383 . - 0 ID=LTnewLM_170011700.1:CDS:1;Parent=LTnewLM_170011700.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 281826 285383 . - . ID=LTnewLM_170011700.1:pep;Derives_from=LTnewLM_170011700.1;orthologous_to=LmjF.17.0530_mRNA;ortholog_cluster=OG0001485;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 286760 290783 . - . ID=LTnewLM_170011800:pseudogene;coverage=0.980;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0540_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 286760 290783 . - . ID=LTnewLM_170011800.1;Parent=LTnewLM_170011800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 286760 290783 . - . ID=LTnewLM_170011800.1:pseudogenic_exon:1;Parent=LTnewLM_170011800.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 286760 290783 . - . ID=LTnewLM_170011800.1:pep;Derives_from=LTnewLM_170011800.1;product=term%3Dhypothetical protein ### LTnewLM_17 Liftoff gene 292228 293118 . - . ID=LTnewLM_170011900;coverage=0.993;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0550_0 LTnewLM_17 Liftoff mRNA 292228 293118 . - . ID=LTnewLM_170011900.1;Parent=LTnewLM_170011900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 292228 293118 . - 0 ID=LTnewLM_170011900.1:CDS:1;Parent=LTnewLM_170011900.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 292228 293118 . - . ID=LTnewLM_170011900.1:pep;Derives_from=LTnewLM_170011900.1;orthologous_to=LmjF.17.0550_mRNA;ortholog_cluster=OG0001486;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_17 Pfam protein_match 292291 292470 . - . Parent=LTnewLM_170011900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_17 AUGUSTUS gene 294159 294989 1 - . ID=LTnewLM_170012000 LTnewLM_17 AUGUSTUS mRNA 294159 294989 1 - . ID=LTnewLM_170012000.1;Parent=LTnewLM_170012000 LTnewLM_17 AUGUSTUS CDS 294159 294989 1 - 0 ID=LTnewLM_170012000.1:CDS:1;Parent=LTnewLM_170012000.1 ### LTnewLM_17 . polypeptide 294159 294989 . - . ID=LTnewLM_170012000.1:pep;Derives_from=LTnewLM_170012000.1;orthologous_to=LmjF.17.0560_mRNA;ortholog_cluster=OG0001487;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 295931 299566 1 - . ID=LTnewLM_170012100 LTnewLM_17 AUGUSTUS mRNA 295931 299566 1 - . ID=LTnewLM_170012100.1;Parent=LTnewLM_170012100 LTnewLM_17 AUGUSTUS CDS 295931 299566 1 - 0 ID=LTnewLM_170012100.1:CDS:1;Parent=LTnewLM_170012100.1 ### LTnewLM_17 . polypeptide 295931 299566 . - . ID=LTnewLM_170012100.1:pep;Derives_from=LTnewLM_170012100.1;orthologous_to=LmjF.17.0570_mRNA;ortholog_cluster=OG0001488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 300440 301597 1 - . ID=LTnewLM_170012200 LTnewLM_17 AUGUSTUS mRNA 300440 301597 1 - . ID=LTnewLM_170012200.1;Parent=LTnewLM_170012200 LTnewLM_17 AUGUSTUS CDS 300440 301597 1 - 0 ID=LTnewLM_170012200.1:CDS:1;Parent=LTnewLM_170012200.1 ### LTnewLM_17 . polypeptide 300440 301597 . - . ID=LTnewLM_170012200.1:pep;Derives_from=LTnewLM_170012200.1;orthologous_to=LmjF.17.0580_mRNA;ortholog_cluster=OG0001489;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_17 Pfam protein_match 300929 301555 . - . Parent=LTnewLM_170012200.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_17 Liftoff gene 302329 307584 . - . ID=LTnewLM_170012300;coverage=0.989;sequence_ID=0.919;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0590_0 LTnewLM_17 Liftoff mRNA 302329 307584 . - . ID=LTnewLM_170012300.1;Parent=LTnewLM_170012300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 302329 307584 . - 0 ID=LTnewLM_170012300.1:CDS:1;Parent=LTnewLM_170012300.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 302329 307584 . - . ID=LTnewLM_170012300.1:pep;Derives_from=LTnewLM_170012300.1;orthologous_to=LmjF.17.0590_mRNA;ortholog_cluster=OG0001490;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 310650 314054 1 - . ID=LTnewLM_170012400 LTnewLM_17 AUGUSTUS mRNA 310650 314054 1 - . ID=LTnewLM_170012400.1;Parent=LTnewLM_170012400 LTnewLM_17 AUGUSTUS CDS 310650 314054 1 - 0 ID=LTnewLM_170012400.1:CDS:1;Parent=LTnewLM_170012400.1 ### LTnewLM_17 . polypeptide 310650 314054 . - . ID=LTnewLM_170012400.1:pep;Derives_from=LTnewLM_170012400.1;orthologous_to=LmjF.17.0600_mRNA;ortholog_cluster=OG0001491;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702|Pfam:PF13246|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_17 Pfam protein_match 310857 311375 . - . Parent=LTnewLM_170012400.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus LTnewLM_17 Pfam protein_match 311592 312872 . - . Parent=LTnewLM_170012400.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_17 Pfam protein_match 312216 312620 . - . Parent=LTnewLM_170012400.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_17 Pfam protein_match 312927 313502 . - . Parent=LTnewLM_170012400.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_17 Pfam protein_match 313677 313880 . - . Parent=LTnewLM_170012400.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus ### LTnewLM_17 AUGUSTUS gene 316965 318464 1 - . ID=LTnewLM_170012500 LTnewLM_17 AUGUSTUS mRNA 316965 318464 1 - . ID=LTnewLM_170012500.1;Parent=LTnewLM_170012500 LTnewLM_17 AUGUSTUS CDS 316965 318464 1 - 0 ID=LTnewLM_170012500.1:CDS:1;Parent=LTnewLM_170012500.1 ### LTnewLM_17 . polypeptide 316965 318464 . - . ID=LTnewLM_170012500.1:pep;Derives_from=LTnewLM_170012500.1;orthologous_to=LmjF.17.0610_mRNA;ortholog_cluster=OG0001492;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_17 Pfam protein_match 317772 318038 . - . Parent=LTnewLM_170012500.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 LTnewLM_17 Pfam protein_match 318111 318356 . - . Parent=LTnewLM_170012500.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_17 AUGUSTUS gene 319601 319912 1 - . ID=LTnewLM_170012600 LTnewLM_17 AUGUSTUS mRNA 319601 319912 1 - . ID=LTnewLM_170012600.1;Parent=LTnewLM_170012600 LTnewLM_17 AUGUSTUS CDS 319601 319912 1 - 0 ID=LTnewLM_170012600.1:CDS:1;Parent=LTnewLM_170012600.1 ### LTnewLM_17 . polypeptide 319601 319912 . - . ID=LTnewLM_170012600.1:pep;Derives_from=LTnewLM_170012600.1;orthologous_to=LmjF.17.0620_mRNA;ortholog_cluster=OG0001493;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_17 Pfam protein_match 319676 319903 . - . Parent=LTnewLM_170012600.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_17 AUGUSTUS gene 323178 324344 1 - . ID=LTnewLM_170012700 LTnewLM_17 AUGUSTUS mRNA 323178 324344 1 - . ID=LTnewLM_170012700.1;Parent=LTnewLM_170012700 LTnewLM_17 AUGUSTUS CDS 323178 324344 1 - 0 ID=LTnewLM_170012700.1:CDS:1;Parent=LTnewLM_170012700.1 ### LTnewLM_17 . polypeptide 323178 324344 . - . ID=LTnewLM_170012700.1:pep;Derives_from=LTnewLM_170012700.1;orthologous_to=LmjF.17.0630_mRNA;ortholog_cluster=OG0001494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 324901 325353 1 - . ID=LTnewLM_170012800 LTnewLM_17 AUGUSTUS mRNA 324901 325353 1 - . ID=LTnewLM_170012800.1;Parent=LTnewLM_170012800 LTnewLM_17 AUGUSTUS CDS 324901 325353 1 - 0 ID=LTnewLM_170012800.1:CDS:1;Parent=LTnewLM_170012800.1 ### LTnewLM_17 . polypeptide 324901 325353 . - . ID=LTnewLM_170012800.1:pep;Derives_from=LTnewLM_170012800.1;orthologous_to=LTnewLM_290014700.1,LTnewLM_290014900.1;ortholog_cluster=OG0000354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 326228 326518 1 - . ID=LTnewLM_170012900 LTnewLM_17 AUGUSTUS mRNA 326228 326518 1 - . ID=LTnewLM_170012900.1;Parent=LTnewLM_170012900 LTnewLM_17 AUGUSTUS CDS 326228 326518 1 - 0 ID=LTnewLM_170012900.1:CDS:1;Parent=LTnewLM_170012900.1 ### LTnewLM_17 . polypeptide 326228 326518 . - . ID=LTnewLM_170012900.1:pep;Derives_from=LTnewLM_170012900.1;orthologous_to=LmjF.17.0780_mRNA;ortholog_cluster=OG0001495;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_17 Pfam protein_match 326279 326509 . - . Parent=LTnewLM_170012900.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_17 Liftoff gene 330282 331862 . - . ID=LTnewLM_170013000;coverage=0.999;sequence_ID=0.902;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0770_0 LTnewLM_17 Liftoff mRNA 330282 331862 . - . ID=LTnewLM_170013000.1;Parent=LTnewLM_170013000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 330282 331862 . - 0 ID=LTnewLM_170013000.1:CDS:1;Parent=LTnewLM_170013000.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 330282 331862 . - . ID=LTnewLM_170013000.1:pep;Derives_from=LTnewLM_170013000.1;orthologous_to=LmjF.17.0770_mRNA;ortholog_cluster=OG0001496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 333024 334271 0.95 - . ID=LTnewLM_170013100 LTnewLM_17 AUGUSTUS mRNA 333024 334271 0.95 - . ID=LTnewLM_170013100.1;Parent=LTnewLM_170013100 LTnewLM_17 AUGUSTUS CDS 333024 334271 0.95 - 0 ID=LTnewLM_170013100.1:CDS:1;Parent=LTnewLM_170013100.1 ### LTnewLM_17 . polypeptide 333024 334271 . - . ID=LTnewLM_170013100.1:pep;Derives_from=LTnewLM_170013100.1;orthologous_to=LmjF.17.0760_mRNA;ortholog_cluster=OG0001497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 336624 340565 1 - . ID=LTnewLM_170013200 LTnewLM_17 AUGUSTUS mRNA 336624 340565 1 - . ID=LTnewLM_170013200.1;Parent=LTnewLM_170013200 LTnewLM_17 AUGUSTUS CDS 336624 340565 1 - 0 ID=LTnewLM_170013200.1:CDS:1;Parent=LTnewLM_170013200.1 ### LTnewLM_17 . polypeptide 336624 340565 . - . ID=LTnewLM_170013200.1:pep;Derives_from=LTnewLM_170013200.1;orthologous_to=LmjF.17.0750_mRNA;ortholog_cluster=OG0001498;product=term%3DEF-hand domain/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17958|Pfam:PF13499 LTnewLM_17 Pfam protein_match 336948 337250 . - . Parent=LTnewLM_170013200.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_17 Pfam protein_match 337302 337520 . - . Parent=LTnewLM_170013200.1:pep;Name=PF17958;signature_desc=EF-hand domain ### LTnewLM_17 AUGUSTUS gene 342104 343162 1 - . ID=LTnewLM_170013300 LTnewLM_17 AUGUSTUS mRNA 342104 343162 1 - . ID=LTnewLM_170013300.1;Parent=LTnewLM_170013300 LTnewLM_17 AUGUSTUS CDS 342104 343162 1 - 0 ID=LTnewLM_170013300.1:CDS:1;Parent=LTnewLM_170013300.1 ### LTnewLM_17 . polypeptide 342104 343162 . - . ID=LTnewLM_170013300.1:pep;Derives_from=LTnewLM_170013300.1;orthologous_to=LmjF.17.0740_mRNA;ortholog_cluster=OG0001499;product=term%3DVAD1 Analog of StAR-related lipid transfer domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16016 LTnewLM_17 Pfam protein_match 342572 342988 . - . Parent=LTnewLM_170013300.1:pep;Name=PF16016;signature_desc=VAD1 Analog of StAR-related lipid transfer domain ### LTnewLM_17 Liftoff gene 343856 345994 . - . ID=LTnewLM_170013400;coverage=0.998;sequence_ID=0.951;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.0730_0 LTnewLM_17 Liftoff mRNA 343856 345994 . - . ID=LTnewLM_170013400.1;Parent=LTnewLM_170013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 343856 345994 . - 0 ID=LTnewLM_170013400.1:CDS:1;Parent=LTnewLM_170013400.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 343856 345994 . - . ID=LTnewLM_170013400.1:pep;Derives_from=LTnewLM_170013400.1;orthologous_to=LmjF.17.0730_mRNA;ortholog_cluster=OG0001500;product=term%3DGRAM domain/VAD1 Analog of StAR-related lipid transfer domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02893|Pfam:PF16016 LTnewLM_17 Pfam protein_match 344270 344686 . - . Parent=LTnewLM_170013400.1:pep;Name=PF16016;signature_desc=VAD1 Analog of StAR-related lipid transfer domain LTnewLM_17 Pfam protein_match 344918 345223 . - . Parent=LTnewLM_170013400.1:pep;Name=PF02893;signature_desc=GRAM domain LTnewLM_17 Pfam protein_match 345650 345928 . - . Parent=LTnewLM_170013400.1:pep;Name=PF02893;signature_desc=GRAM domain ### LTnewLM_17 AUGUSTUS gene 346901 348220 1 - . ID=LTnewLM_170013500 LTnewLM_17 AUGUSTUS mRNA 346901 348220 1 - . ID=LTnewLM_170013500.1;Parent=LTnewLM_170013500 LTnewLM_17 AUGUSTUS CDS 346901 348220 1 - 0 ID=LTnewLM_170013500.1:CDS:1;Parent=LTnewLM_170013500.1 ### LTnewLM_17 . polypeptide 346901 348220 . - . ID=LTnewLM_170013500.1:pep;Derives_from=LTnewLM_170013500.1;orthologous_to=LmjF.17.0733_mRNA;ortholog_cluster=OG0001501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 Aragorn_1.2.36 gene 353800 353872 . - . ID=LTnewLM_170013600 LTnewLM_17 Aragorn_1.2.36 tRNA 353800 353872 . - . ID=LTnewLM_170013600:tRNA;Parent=LTnewLM_170013600;aa=Asp;anticodon=gtc;gc_content=58.9 ### LTnewLM_17 Aragorn_1.2.36 gene 353950 354031 . + . ID=LTnewLM_170013700 LTnewLM_17 Aragorn_1.2.36 tRNA 353950 354031 . + . ID=LTnewLM_170013700:tRNA;Parent=LTnewLM_170013700;aa=Ser;anticodon=gct;gc_content=58.5 ### LTnewLM_17 Aragorn_1.2.36 gene 354090 354165 . + . ID=LTnewLM_170013800 LTnewLM_17 Aragorn_1.2.36 tRNA 354090 354165 . + . ID=LTnewLM_170013800:tRNA;Parent=LTnewLM_170013800;aa=Ala;anticodon=agc;gc_content=52.6 ### LTnewLM_17 AUGUSTUS gene 355022 357127 1 - . ID=LTnewLM_170013900 LTnewLM_17 AUGUSTUS mRNA 355022 357127 1 - . ID=LTnewLM_170013900.1;Parent=LTnewLM_170013900 LTnewLM_17 AUGUSTUS CDS 355022 357127 1 - 0 ID=LTnewLM_170013900.1:CDS:1;Parent=LTnewLM_170013900.1 ### LTnewLM_17 . polypeptide 355022 357127 . - . ID=LTnewLM_170013900.1:pep;Derives_from=LTnewLM_170013900.1;orthologous_to=LmjF.17.0790_mRNA;ortholog_cluster=OG0001502;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like/POLO box duplicated region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531|Pfam:PF00659;Ontology_term=GO:0004672,GO:0005515,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 355112 355246 . - . Parent=LTnewLM_170013900.1:pep;Name=PF00659;signature_desc=POLO box duplicated region;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 355418 355636 . - . Parent=LTnewLM_170013900.1:pep;Name=PF00659;signature_desc=POLO box duplicated region;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 356234 356980 . - . Parent=LTnewLM_170013900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_17 Pfam protein_match 356246 356983 . - . Parent=LTnewLM_170013900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_17 Pfam protein_match 356273 356692 . - . Parent=LTnewLM_170013900.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_17 AUGUSTUS gene 359400 361073 1 - . ID=LTnewLM_170014000 LTnewLM_17 AUGUSTUS mRNA 359400 361073 1 - . ID=LTnewLM_170014000.1;Parent=LTnewLM_170014000 LTnewLM_17 AUGUSTUS CDS 359400 361073 1 - 0 ID=LTnewLM_170014000.1:CDS:1;Parent=LTnewLM_170014000.1 ### LTnewLM_17 . polypeptide 359400 361073 . - . ID=LTnewLM_170014000.1:pep;Derives_from=LTnewLM_170014000.1;orthologous_to=LmjF.17.0640_mRNA;ortholog_cluster=OG0001503;product=term%3DVID27 C-terminal WD40-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08553 LTnewLM_17 Pfam protein_match 359571 360341 . - . Parent=LTnewLM_170014000.1:pep;Name=PF08553;signature_desc=VID27 C-terminal WD40-like domain ### LTnewLM_17 AUGUSTUS gene 361852 365472 1 - . ID=LTnewLM_170014100 LTnewLM_17 AUGUSTUS mRNA 361852 365472 1 - . ID=LTnewLM_170014100.1;Parent=LTnewLM_170014100 LTnewLM_17 AUGUSTUS CDS 361852 365472 1 - 0 ID=LTnewLM_170014100.1:CDS:1;Parent=LTnewLM_170014100.1 ### LTnewLM_17 . polypeptide 361852 365472 . - . ID=LTnewLM_170014100.1:pep;Derives_from=LTnewLM_170014100.1;orthologous_to=LmjF.17.0650_mRNA;ortholog_cluster=OG0001504;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 366237 370070 1 - . ID=LTnewLM_170014200 LTnewLM_17 AUGUSTUS mRNA 366237 370070 1 - . ID=LTnewLM_170014200.1;Parent=LTnewLM_170014200 LTnewLM_17 AUGUSTUS CDS 366237 370070 1 - 0 ID=LTnewLM_170014200.1:CDS:1;Parent=LTnewLM_170014200.1 ### LTnewLM_17 . polypeptide 366237 370070 . - . ID=LTnewLM_170014200.1:pep;Derives_from=LTnewLM_170014200.1;orthologous_to=LmjF.17.0660_mRNA;ortholog_cluster=OG0001505;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 371386 376902 1 - . ID=LTnewLM_170014300 LTnewLM_17 AUGUSTUS mRNA 371386 376902 1 - . ID=LTnewLM_170014300.1;Parent=LTnewLM_170014300 LTnewLM_17 AUGUSTUS CDS 371386 376902 1 - 0 ID=LTnewLM_170014300.1:CDS:1;Parent=LTnewLM_170014300.1 ### LTnewLM_17 . polypeptide 371386 376902 . - . ID=LTnewLM_170014300.1:pep;Derives_from=LTnewLM_170014300.1;orthologous_to=LmjF.17.0670_mRNA;ortholog_cluster=OG0001506;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_17 Pfam protein_match 372094 372939 . - . Parent=LTnewLM_170014300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_17 AUGUSTUS gene 379085 380419 1 - . ID=LTnewLM_170014400 LTnewLM_17 AUGUSTUS mRNA 379085 380419 1 - . ID=LTnewLM_170014400.1;Parent=LTnewLM_170014400 LTnewLM_17 AUGUSTUS CDS 379085 380419 1 - 0 ID=LTnewLM_170014400.1:CDS:1;Parent=LTnewLM_170014400.1 ### LTnewLM_17 . polypeptide 379085 380419 . - . ID=LTnewLM_170014400.1:pep;Derives_from=LTnewLM_170014400.1;orthologous_to=LmjF.17.0680_mRNA;ortholog_cluster=OG0001507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . polypeptide 381167 382030 . - . ID=LTnewLM_170014500.1:pep;Derives_from=LTnewLM_170014500.1;orthologous_to=LTnewLM_170014500.2,LmjF.17.0690_mRNA;ortholog_cluster=OG0000355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 381167 382876 1.99 - . ID=LTnewLM_170014500 LTnewLM_17 AUGUSTUS mRNA 381167 382030 1 - . ID=LTnewLM_170014500.1;Parent=LTnewLM_170014500 LTnewLM_17 AUGUSTUS CDS 381167 382030 1 - 0 ID=LTnewLM_170014500.1:CDS:1;Parent=LTnewLM_170014500.1 LTnewLM_17 AUGUSTUS mRNA 381167 382876 0.99 - . ID=LTnewLM_170014500.2;Parent=LTnewLM_170014500 LTnewLM_17 AUGUSTUS CDS 381167 382876 0.99 - 0 ID=LTnewLM_170014500.2:CDS:1;Parent=LTnewLM_170014500.2 ### LTnewLM_17 . polypeptide 381167 382876 . - . ID=LTnewLM_170014500.2:pep;Derives_from=LTnewLM_170014500.2;orthologous_to=LTnewLM_170014500.1,LmjF.17.0690_mRNA;ortholog_cluster=OG0000355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 383765 385436 2.81e+03 - . ID=LTnewLM_170014600:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.17.0700:mRNA 14 576;original_prot_length=576 LTnewLM_17 . pseudogenic_transcript 383765 385436 . - . ID=LTnewLM_170014600.1;Parent=LTnewLM_170014600:pseudogene LTnewLM_17 . pseudogenic_exon 383765 384988 . - . ID=LTnewLM_170014600.1:pseudogenic_exon:1;Parent=LTnewLM_170014600.1 LTnewLM_17 . pseudogenic_exon 384991 385209 . - . ID=LTnewLM_170014600.1:pseudogenic_exon:2;Parent=LTnewLM_170014600.1 LTnewLM_17 . pseudogenic_exon 385211 385384 . - . ID=LTnewLM_170014600.1:pseudogenic_exon:3;Parent=LTnewLM_170014600.1 LTnewLM_17 . pseudogenic_exon 385386 385436 . - . ID=LTnewLM_170014600.1:pseudogenic_exon:4;Parent=LTnewLM_170014600.1 ### LTnewLM_17 . polypeptide 383765 385436 . - . ID=LTnewLM_170014600.1:pep;Derives_from=LTnewLM_170014600.1;orthologous_to=LmjF.17.0700_mRNA;ortholog_cluster=OG0007478;product=term%3DLysine methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294 LTnewLM_17 Pfam protein_match 384792 385100 . - . Parent=LTnewLM_170014600.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_17 AUGUSTUS gene 385915 388341 1 - . ID=LTnewLM_170014700 LTnewLM_17 AUGUSTUS mRNA 385915 388341 1 - . ID=LTnewLM_170014700.1;Parent=LTnewLM_170014700 LTnewLM_17 AUGUSTUS CDS 385915 388341 1 - 0 ID=LTnewLM_170014700.1:CDS:1;Parent=LTnewLM_170014700.1 ### LTnewLM_17 . polypeptide 385915 388341 . - . ID=LTnewLM_170014700.1:pep;Derives_from=LTnewLM_170014700.1;orthologous_to=LmjF.17.0710_mRNA;ortholog_cluster=OG0001508;product=term%3DMyb-like DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00249|Pfam:PF13921;Ontology_term=GO:0003682 LTnewLM_17 Pfam protein_match 388054 388158 . - . Parent=LTnewLM_170014700.1:pep;Name=PF00249;signature_desc=Myb-like DNA-binding domain;Ontology_term=GO:0003682 LTnewLM_17 Pfam protein_match 388171 388311 . - . Parent=LTnewLM_170014700.1:pep;Name=PF13921;signature_desc=Myb-like DNA-binding domain LTnewLM_17 Pfam protein_match 388183 388317 . - . Parent=LTnewLM_170014700.1:pep;Name=PF00249;signature_desc=Myb-like DNA-binding domain;Ontology_term=GO:0003682 ### LTnewLM_17 AUGUSTUS gene 389130 391526 1 - . ID=LTnewLM_170014800 LTnewLM_17 AUGUSTUS mRNA 389130 391526 1 - . ID=LTnewLM_170014800.1;Parent=LTnewLM_170014800 LTnewLM_17 AUGUSTUS CDS 389130 391526 1 - 0 ID=LTnewLM_170014800.1:CDS:1;Parent=LTnewLM_170014800.1 ### LTnewLM_17 . polypeptide 389130 391526 . - . ID=LTnewLM_170014800.1:pep;Derives_from=LTnewLM_170014800.1;orthologous_to=LmjF.17.0720_mRNA;ortholog_cluster=OG0001509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 393988 395466 1 - . ID=LTnewLM_170014900 LTnewLM_17 AUGUSTUS mRNA 393988 395466 1 - . ID=LTnewLM_170014900.1;Parent=LTnewLM_170014900 LTnewLM_17 AUGUSTUS CDS 393988 395466 1 - 0 ID=LTnewLM_170014900.1:CDS:1;Parent=LTnewLM_170014900.1 ### LTnewLM_17 . polypeptide 393988 395466 . - . ID=LTnewLM_170014900.1:pep;Derives_from=LTnewLM_170014900.1;orthologous_to=LmjF.17.0725_mRNA;ortholog_cluster=OG0001510;product=term%3DIMP dehydrogenase / GMP reductase domain/CBS domain/FMN-dependent dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00478|Pfam:PF00571|Pfam:PF01070;Ontology_term=GO:0055114,GO:0016491,GO:0003824 LTnewLM_17 Pfam protein_match 394009 395430 . - . Parent=LTnewLM_170014900.1:pep;Name=PF00478;signature_desc=IMP dehydrogenase / GMP reductase domain;Ontology_term=GO:0003824,GO:0055114 LTnewLM_17 Pfam protein_match 394336 394668 . - . Parent=LTnewLM_170014900.1:pep;Name=PF01070;signature_desc=FMN-dependent dehydrogenase;Ontology_term=GO:0016491 LTnewLM_17 Pfam protein_match 394825 394962 . - . Parent=LTnewLM_170014900.1:pep;Name=PF00571;signature_desc=CBS domain LTnewLM_17 Pfam protein_match 395008 395166 . - . Parent=LTnewLM_170014900.1:pep;Name=PF00571;signature_desc=CBS domain ### LTnewLM_17 AUGUSTUS gene 396252 397220 1 - . ID=LTnewLM_170015000 LTnewLM_17 AUGUSTUS mRNA 396252 397220 1 - . ID=LTnewLM_170015000.1;Parent=LTnewLM_170015000 LTnewLM_17 AUGUSTUS CDS 396252 397220 1 - 0 ID=LTnewLM_170015000.1:CDS:1;Parent=LTnewLM_170015000.1 ### LTnewLM_17 . polypeptide 396252 397220 . - . ID=LTnewLM_170015000.1:pep;Derives_from=LTnewLM_170015000.1;orthologous_to=LmjF.17.0735_mRNA;ortholog_cluster=OG0001511;product=term%3DAntibiotic biosynthesis monooxygenase/SLOG cluster4 family/Possible lysine decarboxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03992|Pfam:PF18306|Pfam:PF03641 LTnewLM_17 Pfam protein_match 396318 396707 . - . Parent=LTnewLM_170015000.1:pep;Name=PF03641;signature_desc=Possible lysine decarboxylase LTnewLM_17 Pfam protein_match 396498 396821 . - . Parent=LTnewLM_170015000.1:pep;Name=PF18306;signature_desc=SLOG cluster4 family LTnewLM_17 Pfam protein_match 396996 397214 . - . Parent=LTnewLM_170015000.1:pep;Name=PF03992;signature_desc=Antibiotic biosynthesis monooxygenase ### LTnewLM_17 AUGUSTUS gene 401054 403876 1 - . ID=LTnewLM_170015100 LTnewLM_17 AUGUSTUS mRNA 401054 403876 1 - . ID=LTnewLM_170015100.1;Parent=LTnewLM_170015100 LTnewLM_17 AUGUSTUS CDS 401054 403876 1 - 0 ID=LTnewLM_170015100.1:CDS:1;Parent=LTnewLM_170015100.1 ### LTnewLM_17 . polypeptide 401054 403876 . - . ID=LTnewLM_170015100.1:pep;Derives_from=LTnewLM_170015100.1;orthologous_to=LmjF.17.0800_mRNA;ortholog_cluster=OG0001512;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_17 Pfam protein_match 402857 403825 . - . Parent=LTnewLM_170015100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_17 Pfam protein_match 403403 403843 . - . Parent=LTnewLM_170015100.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_17 AUGUSTUS gene 405168 406622 1 - . ID=LTnewLM_170015200 LTnewLM_17 AUGUSTUS mRNA 405168 406622 1 - . ID=LTnewLM_170015200.1;Parent=LTnewLM_170015200 LTnewLM_17 AUGUSTUS CDS 405168 406622 1 - 0 ID=LTnewLM_170015200.1:CDS:1;Parent=LTnewLM_170015200.1 ### LTnewLM_17 . polypeptide 405168 406622 . - . ID=LTnewLM_170015200.1:pep;Derives_from=LTnewLM_170015200.1;orthologous_to=LmjF.17.0810_mRNA;ortholog_cluster=OG0001513;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 407665 408288 1 - . ID=LTnewLM_170015300 LTnewLM_17 AUGUSTUS mRNA 407665 408288 1 - . ID=LTnewLM_170015300.1;Parent=LTnewLM_170015300 LTnewLM_17 AUGUSTUS CDS 407665 408288 1 - 0 ID=LTnewLM_170015300.1:CDS:1;Parent=LTnewLM_170015300.1 ### LTnewLM_17 . polypeptide 407665 408288 . - . ID=LTnewLM_170015300.1:pep;Derives_from=LTnewLM_170015300.1;orthologous_to=LmjF.17.0815_mRNA;ortholog_cluster=OG0001514;product=term%3DG-patch domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01585;Ontology_term=GO:0003676 LTnewLM_17 Pfam protein_match 408154 408279 . - . Parent=LTnewLM_170015300.1:pep;Name=PF01585;signature_desc=G-patch domain;Ontology_term=GO:0003676 ### LTnewLM_17 AUGUSTUS gene 412951 414741 1 - . ID=LTnewLM_170015400 LTnewLM_17 AUGUSTUS mRNA 412951 414741 1 - . ID=LTnewLM_170015400.1;Parent=LTnewLM_170015400 LTnewLM_17 AUGUSTUS CDS 412951 414741 1 - 0 ID=LTnewLM_170015400.1:CDS:1;Parent=LTnewLM_170015400.1 ### LTnewLM_17 . polypeptide 412951 414741 . - . ID=LTnewLM_170015400.1:pep;Derives_from=LTnewLM_170015400.1;orthologous_to=LmjF.17.0820_mRNA;ortholog_cluster=OG0001515;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 417262 419127 1 - . ID=LTnewLM_170015500 LTnewLM_17 AUGUSTUS mRNA 417262 419127 1 - . ID=LTnewLM_170015500.1;Parent=LTnewLM_170015500 LTnewLM_17 AUGUSTUS CDS 417262 419127 1 - 0 ID=LTnewLM_170015500.1:CDS:1;Parent=LTnewLM_170015500.1 ### LTnewLM_17 . polypeptide 417262 419127 . - . ID=LTnewLM_170015500.1:pep;Derives_from=LTnewLM_170015500.1;orthologous_to=LmjF.17.0830_mRNA;ortholog_cluster=OG0001516;product=term%3DLariat debranching enzyme%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05011;Ontology_term=GO:0006397,GO:0016788 LTnewLM_17 Pfam protein_match 417892 418110 . - . Parent=LTnewLM_170015500.1:pep;Name=PF05011;signature_desc=Lariat debranching enzyme%2C C-terminal domain;Ontology_term=GO:0016788,GO:0006397 ### LTnewLM_17 AUGUSTUS gene 420021 421730 1 - . ID=LTnewLM_170015600 LTnewLM_17 AUGUSTUS mRNA 420021 421730 1 - . ID=LTnewLM_170015600.1;Parent=LTnewLM_170015600 LTnewLM_17 AUGUSTUS CDS 420021 421730 1 - 0 ID=LTnewLM_170015600.1:CDS:1;Parent=LTnewLM_170015600.1 ### LTnewLM_17 . polypeptide 420021 421730 . - . ID=LTnewLM_170015600.1:pep;Derives_from=LTnewLM_170015600.1;orthologous_to=LmjF.17.0840_mRNA;ortholog_cluster=OG0001517;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 422327 422680 1 - . ID=LTnewLM_170015700 LTnewLM_17 AUGUSTUS mRNA 422327 422680 1 - . ID=LTnewLM_170015700.1;Parent=LTnewLM_170015700 LTnewLM_17 AUGUSTUS CDS 422327 422680 1 - 0 ID=LTnewLM_170015700.1:CDS:1;Parent=LTnewLM_170015700.1 ### LTnewLM_17 . polypeptide 422327 422680 . - . ID=LTnewLM_170015700.1:pep;Derives_from=LTnewLM_170015700.1;orthologous_to=LmjF.17.0850_mRNA;ortholog_cluster=OG0001518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 423655 424089 1 - . ID=LTnewLM_170015800 LTnewLM_17 AUGUSTUS mRNA 423655 424089 1 - . ID=LTnewLM_170015800.1;Parent=LTnewLM_170015800 LTnewLM_17 AUGUSTUS CDS 423655 424089 1 - 0 ID=LTnewLM_170015800.1:CDS:1;Parent=LTnewLM_170015800.1 ### LTnewLM_17 . polypeptide 423655 424089 . - . ID=LTnewLM_170015800.1:pep;Derives_from=LTnewLM_170015800.1;orthologous_to=LmjF.17.0860_mRNA;ortholog_cluster=OG0001519;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 425705 427039 1 + . ID=LTnewLM_170015900 LTnewLM_17 AUGUSTUS mRNA 425705 427039 1 + . ID=LTnewLM_170015900.1;Parent=LTnewLM_170015900 LTnewLM_17 AUGUSTUS CDS 425705 427039 1 + 0 ID=LTnewLM_170015900.1:CDS:1;Parent=LTnewLM_170015900.1 ### LTnewLM_17 . polypeptide 425705 427039 . + . ID=LTnewLM_170015900.1:pep;Derives_from=LTnewLM_170015900.1;orthologous_to=LmjF.17.0870_mRNA;ortholog_cluster=OG0001520;product=term%3DMETA domain/Domain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03724|Pfam:PF09149 LTnewLM_17 Pfam protein_match 425732 426010 . + . Parent=LTnewLM_170015900.1:pep;Name=PF03724;signature_desc=META domain LTnewLM_17 Pfam protein_match 426080 426337 . + . Parent=LTnewLM_170015900.1:pep;Name=PF03724;signature_desc=META domain LTnewLM_17 Pfam protein_match 426383 426682 . + . Parent=LTnewLM_170015900.1:pep;Name=PF03724;signature_desc=META domain LTnewLM_17 Pfam protein_match 426725 427024 . + . Parent=LTnewLM_170015900.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_17 AUGUSTUS gene 429654 431339 1 + . ID=LTnewLM_170016000 LTnewLM_17 AUGUSTUS mRNA 429654 431339 1 + . ID=LTnewLM_170016000.1;Parent=LTnewLM_170016000 LTnewLM_17 AUGUSTUS CDS 429654 431339 1 + 0 ID=LTnewLM_170016000.1:CDS:1;Parent=LTnewLM_170016000.1 ### LTnewLM_17 . polypeptide 429654 431339 . + . ID=LTnewLM_170016000.1:pep;Derives_from=LTnewLM_170016000.1;orthologous_to=LmjF.17.0880_mRNA;ortholog_cluster=OG0001521;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 432906 433244 1 + . ID=LTnewLM_170016100 LTnewLM_17 AUGUSTUS mRNA 432906 433244 1 + . ID=LTnewLM_170016100.1;Parent=LTnewLM_170016100 LTnewLM_17 AUGUSTUS CDS 432906 433244 1 + 0 ID=LTnewLM_170016100.1:CDS:1;Parent=LTnewLM_170016100.1 ### LTnewLM_17 . polypeptide 432906 433244 . + . ID=LTnewLM_170016100.1:pep;Derives_from=LTnewLM_170016100.1;orthologous_to=LmjF.17.0890_mRNA;ortholog_cluster=OG0001522;product=term%3DMETA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03724 LTnewLM_17 Pfam protein_match 432939 433217 . + . Parent=LTnewLM_170016100.1:pep;Name=PF03724;signature_desc=META domain ### LTnewLM_17 AUGUSTUS gene 435041 437065 1 + . ID=LTnewLM_170016200 LTnewLM_17 AUGUSTUS mRNA 435041 437065 1 + . ID=LTnewLM_170016200.1;Parent=LTnewLM_170016200 LTnewLM_17 AUGUSTUS CDS 435041 437065 1 + 0 ID=LTnewLM_170016200.1:CDS:1;Parent=LTnewLM_170016200.1 ### LTnewLM_17 . polypeptide 435041 437065 . + . ID=LTnewLM_170016200.1:pep;Derives_from=LTnewLM_170016200.1;orthologous_to=LmjF.17.0900_mRNA;ortholog_cluster=OG0001523;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_17 Pfam protein_match 436028 436081 . + . Parent=LTnewLM_170016200.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_17 Pfam protein_match 436205 436267 . + . Parent=LTnewLM_170016200.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_17 AUGUSTUS gene 438337 439770 1 + . ID=LTnewLM_170016300 LTnewLM_17 AUGUSTUS mRNA 438337 439770 1 + . ID=LTnewLM_170016300.1;Parent=LTnewLM_170016300 LTnewLM_17 AUGUSTUS CDS 438337 439770 1 + 0 ID=LTnewLM_170016300.1:CDS:1;Parent=LTnewLM_170016300.1 ### LTnewLM_17 . polypeptide 438337 439770 . + . ID=LTnewLM_170016300.1:pep;Derives_from=LTnewLM_170016300.1;orthologous_to=LmjF.17.0910_mRNA;ortholog_cluster=OG0001524;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_17 Pfam protein_match 438706 439101 . + . Parent=LTnewLM_170016300.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_17 AUGUSTUS gene 440638 447744 1 + . ID=LTnewLM_170016400 LTnewLM_17 AUGUSTUS mRNA 440638 447744 1 + . ID=LTnewLM_170016400.1;Parent=LTnewLM_170016400 LTnewLM_17 AUGUSTUS CDS 440638 447744 1 + 0 ID=LTnewLM_170016400.1:CDS:1;Parent=LTnewLM_170016400.1 ### LTnewLM_17 . polypeptide 440638 447744 . + . ID=LTnewLM_170016400.1:pep;Derives_from=LTnewLM_170016400.1;orthologous_to=LmjF.17.0920_mRNA;ortholog_cluster=OG0001525;product=term%3DN-terminal helicase PWI domain/DEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain/Sec63 Brl domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18149|Pfam:PF00270|Pfam:PF04851|Pfam:PF00271|Pfam:PF02889;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_17 Pfam protein_match 441409 441699 . + . Parent=LTnewLM_170016400.1:pep;Name=PF18149;signature_desc=N-terminal helicase PWI domain LTnewLM_17 Pfam protein_match 442096 442620 . + . Parent=LTnewLM_170016400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_17 Pfam protein_match 442114 442617 . + . Parent=LTnewLM_170016400.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_17 Pfam protein_match 443008 443244 . + . Parent=LTnewLM_170016400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_17 Pfam protein_match 443608 444519 . + . Parent=LTnewLM_170016400.1:pep;Name=PF02889;signature_desc=Sec63 Brl domain LTnewLM_17 Pfam protein_match 444700 445254 . + . Parent=LTnewLM_170016400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_17 AUGUSTUS gene 450751 455100 1 + . ID=LTnewLM_170016500 LTnewLM_17 AUGUSTUS mRNA 450751 455100 1 + . ID=LTnewLM_170016500.1;Parent=LTnewLM_170016500 LTnewLM_17 AUGUSTUS CDS 450751 455100 1 + 0 ID=LTnewLM_170016500.1:CDS:1;Parent=LTnewLM_170016500.1 ### LTnewLM_17 . polypeptide 450751 455100 . + . ID=LTnewLM_170016500.1:pep;Derives_from=LTnewLM_170016500.1;orthologous_to=LmjF.17.0930_mRNA;ortholog_cluster=OG0001526;product=term%3DFormin Homology 2 Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02181 LTnewLM_17 Pfam protein_match 453400 454389 . + . Parent=LTnewLM_170016500.1:pep;Name=PF02181;signature_desc=Formin Homology 2 Domain ### LTnewLM_17 AUGUSTUS gene 457085 460291 1 + . ID=LTnewLM_170016600 LTnewLM_17 AUGUSTUS mRNA 457085 460291 1 + . ID=LTnewLM_170016600.1;Parent=LTnewLM_170016600 LTnewLM_17 AUGUSTUS CDS 457085 460291 1 + 0 ID=LTnewLM_170016600.1:CDS:1;Parent=LTnewLM_170016600.1 ### LTnewLM_17 . polypeptide 457085 460291 . + . ID=LTnewLM_170016600.1:pep;Derives_from=LTnewLM_170016600.1;orthologous_to=LmjF.17.0940_mRNA;ortholog_cluster=OG0001527;product=term%3DPhosphorylated CTD interacting factor 1 WW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12237 LTnewLM_17 Pfam protein_match 459437 459907 . + . Parent=LTnewLM_170016600.1:pep;Name=PF12237;signature_desc=Phosphorylated CTD interacting factor 1 WW domain ### LTnewLM_17 . pseudogene 461770 467374 . + . ID=LTnewLM_170016700:pseudogene;coverage=0.989;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.0950_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 461770 467374 . + . ID=LTnewLM_170016700.1;Parent=LTnewLM_170016700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 461770 467374 . + . ID=LTnewLM_170016700.1:pseudogenic_exon:1;Parent=LTnewLM_170016700.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 461770 467374 . + . ID=LTnewLM_170016700.1:pep;Derives_from=LTnewLM_170016700.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 470060 475387 1 + . ID=LTnewLM_170016800 LTnewLM_17 AUGUSTUS mRNA 470060 475387 1 + . ID=LTnewLM_170016800.1;Parent=LTnewLM_170016800 LTnewLM_17 AUGUSTUS CDS 470060 475387 1 + 0 ID=LTnewLM_170016800.1:CDS:1;Parent=LTnewLM_170016800.1 ### LTnewLM_17 . polypeptide 470060 475387 . + . ID=LTnewLM_170016800.1:pep;Derives_from=LTnewLM_170016800.1;orthologous_to=LmjF.17.0960_mRNA;ortholog_cluster=OG0001528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 476465 478690 1 + . ID=LTnewLM_170016900 LTnewLM_17 AUGUSTUS mRNA 476465 478690 1 + . ID=LTnewLM_170016900.1;Parent=LTnewLM_170016900 LTnewLM_17 AUGUSTUS CDS 476465 478690 1 + 0 ID=LTnewLM_170016900.1:CDS:1;Parent=LTnewLM_170016900.1 ### LTnewLM_17 . polypeptide 476465 478690 . + . ID=LTnewLM_170016900.1:pep;Derives_from=LTnewLM_170016900.1;orthologous_to=LmjF.17.0980_mRNA;ortholog_cluster=OG0001529;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 479820 480071 1 + . ID=LTnewLM_170017000 LTnewLM_17 AUGUSTUS mRNA 479820 480071 1 + . ID=LTnewLM_170017000.1;Parent=LTnewLM_170017000 LTnewLM_17 AUGUSTUS CDS 479820 480071 1 + 0 ID=LTnewLM_170017000.1:CDS:1;Parent=LTnewLM_170017000.1 ### LTnewLM_17 . polypeptide 479820 480071 . + . ID=LTnewLM_170017000.1:pep;Derives_from=LTnewLM_170017000.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 481620 502634 1.22 + . ID=LTnewLM_170017100 LTnewLM_17 AUGUSTUS mRNA 481620 502634 0.22 + . ID=LTnewLM_170017100.1;Parent=LTnewLM_170017100 LTnewLM_17 AUGUSTUS CDS 481620 493786 0.22 + 0 ID=LTnewLM_170017100.1:CDS:1;Parent=LTnewLM_170017100.1 LTnewLM_17 AUGUSTUS CDS 493883 502634 0.22 + 1 ID=LTnewLM_170017100.1:CDS:2;Parent=LTnewLM_170017100.1 LTnewLM_17 AUGUSTUS mRNA 496686 502634 1 + . ID=LTnewLM_170017100.2;Parent=LTnewLM_170017100 LTnewLM_17 AUGUSTUS CDS 496686 502634 1 + 0 ID=LTnewLM_170017100.2:CDS:1;Parent=LTnewLM_170017100.2 ### LTnewLM_17 . polypeptide 481620 502634 . + . ID=LTnewLM_170017100.1:pep;Derives_from=LTnewLM_170017100.1;orthologous_to=LTnewLM_170017100.2,LmjF.17.0990_mRNA;ortholog_cluster=OG0000356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . polypeptide 496686 502634 . + . ID=LTnewLM_170017100.2:pep;Derives_from=LTnewLM_170017100.2;orthologous_to=LTnewLM_170017100.1,LmjF.17.0990_mRNA;ortholog_cluster=OG0000356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 503380 505572 1 + . ID=LTnewLM_170017200 LTnewLM_17 AUGUSTUS mRNA 503380 505572 1 + . ID=LTnewLM_170017200.1;Parent=LTnewLM_170017200 LTnewLM_17 AUGUSTUS CDS 503380 505572 1 + 0 ID=LTnewLM_170017200.1:CDS:1;Parent=LTnewLM_170017200.1 ### LTnewLM_17 . polypeptide 503380 505572 . + . ID=LTnewLM_170017200.1:pep;Derives_from=LTnewLM_170017200.1;orthologous_to=LmjF.17.1000_mRNA;ortholog_cluster=OG0001530;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 506711 507721 1 + . ID=LTnewLM_170017300 LTnewLM_17 AUGUSTUS mRNA 506711 507721 1 + . ID=LTnewLM_170017300.1;Parent=LTnewLM_170017300 LTnewLM_17 AUGUSTUS CDS 506711 507721 1 + 0 ID=LTnewLM_170017300.1:CDS:1;Parent=LTnewLM_170017300.1 ### LTnewLM_17 . polypeptide 506711 507721 . + . ID=LTnewLM_170017300.1:pep;Derives_from=LTnewLM_170017300.1;orthologous_to=LmjF.17.1010_mRNA;ortholog_cluster=OG0001531;product=term%3Dalpha/beta hydrolase fold/Alpha/beta hydrolase family/Serine aminopeptidase%2C S33%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00561|Pfam:PF12697|Pfam:PF12146 LTnewLM_17 Pfam protein_match 506882 507244 . + . Parent=LTnewLM_170017300.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_17 Pfam protein_match 506888 507643 . + . Parent=LTnewLM_170017300.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_17 Pfam protein_match 506933 507643 . + . Parent=LTnewLM_170017300.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 ### LTnewLM_17 AUGUSTUS gene 509957 511873 1 + . ID=LTnewLM_170017400 LTnewLM_17 AUGUSTUS mRNA 509957 511873 1 + . ID=LTnewLM_170017400.1;Parent=LTnewLM_170017400 LTnewLM_17 AUGUSTUS CDS 509957 511873 1 + 0 ID=LTnewLM_170017400.1:CDS:1;Parent=LTnewLM_170017400.1 ### LTnewLM_17 . polypeptide 509957 511873 . + . ID=LTnewLM_170017400.1:pep;Derives_from=LTnewLM_170017400.1;orthologous_to=LmjF.17.1020_mRNA;ortholog_cluster=OG0001532;product=term%3DGlycosyltransferase (GlcNAc)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11397 LTnewLM_17 Pfam protein_match 510434 511792 . + . Parent=LTnewLM_170017400.1:pep;Name=PF11397;signature_desc=Glycosyltransferase (GlcNAc) ### LTnewLM_17 AUGUSTUS gene 513134 513490 1 + . ID=LTnewLM_170017500 LTnewLM_17 AUGUSTUS mRNA 513134 513490 1 + . ID=LTnewLM_170017500.1;Parent=LTnewLM_170017500 LTnewLM_17 AUGUSTUS CDS 513134 513490 1 + 0 ID=LTnewLM_170017500.1:CDS:1;Parent=LTnewLM_170017500.1 ### LTnewLM_17 . polypeptide 513134 513490 . + . ID=LTnewLM_170017500.1:pep;Derives_from=LTnewLM_170017500.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 514782 517250 1 + . ID=LTnewLM_170017600 LTnewLM_17 AUGUSTUS mRNA 514782 517250 1 + . ID=LTnewLM_170017600.1;Parent=LTnewLM_170017600 LTnewLM_17 AUGUSTUS CDS 514782 517250 1 + 0 ID=LTnewLM_170017600.1:CDS:1;Parent=LTnewLM_170017600.1 ### LTnewLM_17 . polypeptide 514782 517250 . + . ID=LTnewLM_170017600.1:pep;Derives_from=LTnewLM_170017600.1;orthologous_to=LmjF.17.1030_mRNA;ortholog_cluster=OG0001533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 522769 524064 1 + . ID=LTnewLM_170017700 LTnewLM_17 AUGUSTUS mRNA 522769 524064 1 + . ID=LTnewLM_170017700.1;Parent=LTnewLM_170017700 LTnewLM_17 AUGUSTUS CDS 522769 524064 1 + 0 ID=LTnewLM_170017700.1:CDS:1;Parent=LTnewLM_170017700.1 ### LTnewLM_17 . polypeptide 522769 524064 . + . ID=LTnewLM_170017700.1:pep;Derives_from=LTnewLM_170017700.1;orthologous_to=LmjF.17.1040_mRNA;ortholog_cluster=OG0001534;product=term%3DAlpha/beta hydrolase family/alpha/beta hydrolase fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12697|Pfam:PF00561 LTnewLM_17 Pfam protein_match 522928 523890 . + . Parent=LTnewLM_170017700.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_17 Pfam protein_match 522943 523893 . + . Parent=LTnewLM_170017700.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold ### LTnewLM_17 AUGUSTUS gene 524907 526079 1 + . ID=LTnewLM_170017800 LTnewLM_17 AUGUSTUS mRNA 524907 526079 1 + . ID=LTnewLM_170017800.1;Parent=LTnewLM_170017800 LTnewLM_17 AUGUSTUS CDS 524907 526079 1 + 0 ID=LTnewLM_170017800.1:CDS:1;Parent=LTnewLM_170017800.1 ### LTnewLM_17 . polypeptide 524907 526079 . + . ID=LTnewLM_170017800.1:pep;Derives_from=LTnewLM_170017800.1;orthologous_to=LmjF.17.1050_mRNA;ortholog_cluster=OG0001535;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561|Pfam:PF12697 LTnewLM_17 Pfam protein_match 525147 525992 . + . Parent=LTnewLM_170017800.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_17 Pfam protein_match 525153 525986 . + . Parent=LTnewLM_170017800.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_17 Pfam protein_match 525159 526016 . + . Parent=LTnewLM_170017800.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_17 AUGUSTUS gene 529976 532357 1 + . ID=LTnewLM_170017900 LTnewLM_17 AUGUSTUS mRNA 529976 532357 1 + . ID=LTnewLM_170017900.1;Parent=LTnewLM_170017900 LTnewLM_17 AUGUSTUS CDS 529976 532357 1 + 0 ID=LTnewLM_170017900.1:CDS:1;Parent=LTnewLM_170017900.1 ### LTnewLM_17 . polypeptide 529976 532357 . + . ID=LTnewLM_170017900.1:pep;Derives_from=LTnewLM_170017900.1;orthologous_to=LmjF.17.1060_mRNA;ortholog_cluster=OG0001536;product=term%3Dalpha/beta hydrolase fold/Serine aminopeptidase%2C S33/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00561|Pfam:PF12146|Pfam:PF12697 LTnewLM_17 Pfam protein_match 530270 531037 . + . Parent=LTnewLM_170017900.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_17 Pfam protein_match 530273 531031 . + . Parent=LTnewLM_170017900.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_17 Pfam protein_match 530279 531040 . + . Parent=LTnewLM_170017900.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_17 AUGUSTUS gene 533731 536007 1 + . ID=LTnewLM_170018000 LTnewLM_17 AUGUSTUS mRNA 533731 536007 1 + . ID=LTnewLM_170018000.1;Parent=LTnewLM_170018000 LTnewLM_17 AUGUSTUS CDS 533731 536007 1 + 0 ID=LTnewLM_170018000.1:CDS:1;Parent=LTnewLM_170018000.1 ### LTnewLM_17 . polypeptide 533731 536007 . + . ID=LTnewLM_170018000.1:pep;Derives_from=LTnewLM_170018000.1;orthologous_to=LmjF.17.1070_mRNA;ortholog_cluster=OG0001537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 537857 540079 1 + . ID=LTnewLM_170018100 LTnewLM_17 AUGUSTUS mRNA 537857 540079 1 + . ID=LTnewLM_170018100.1;Parent=LTnewLM_170018100 LTnewLM_17 AUGUSTUS CDS 537857 540079 1 + 0 ID=LTnewLM_170018100.1:CDS:1;Parent=LTnewLM_170018100.1 ### LTnewLM_17 . polypeptide 537857 540079 . + . ID=LTnewLM_170018100.1:pep;Derives_from=LTnewLM_170018100.1;orthologous_to=LmjF.17.1080_mRNA;ortholog_cluster=OG0001538;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 541726 545667 1 + . ID=LTnewLM_170018200 LTnewLM_17 AUGUSTUS mRNA 541726 545667 1 + . ID=LTnewLM_170018200.1;Parent=LTnewLM_170018200 LTnewLM_17 AUGUSTUS CDS 541726 545667 1 + 0 ID=LTnewLM_170018200.1:CDS:1;Parent=LTnewLM_170018200.1 ### LTnewLM_17 . polypeptide 541726 545667 . + . ID=LTnewLM_170018200.1:pep;Derives_from=LTnewLM_170018200.1;orthologous_to=LmjF.17.1090_mRNA;ortholog_cluster=OG0001539;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_17 Pfam protein_match 543400 545574 . + . Parent=LTnewLM_170018200.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_17 AUGUSTUS gene 546580 548202 1 + . ID=LTnewLM_170018300 LTnewLM_17 AUGUSTUS mRNA 546580 548202 1 + . ID=LTnewLM_170018300.1;Parent=LTnewLM_170018300 LTnewLM_17 AUGUSTUS CDS 546580 548202 1 + 0 ID=LTnewLM_170018300.1:CDS:1;Parent=LTnewLM_170018300.1 ### LTnewLM_17 . polypeptide 546580 548202 . + . ID=LTnewLM_170018300.1:pep;Derives_from=LTnewLM_170018300.1;orthologous_to=LmjF.17.1100_mRNA;ortholog_cluster=OG0001540;product=term%3D3-oxo-5-alpha-steroid 4-dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02544;Ontology_term=GO:0016021,GO:0005737,GO:0006629,GO:0016627 LTnewLM_17 Pfam protein_match 547780 547896 . + . Parent=LTnewLM_170018300.1:pep;Name=PF02544;signature_desc=3-oxo-5-alpha-steroid 4-dehydrogenase;Ontology_term=GO:0016627,GO:0006629,GO:0005737,GO:0016021 LTnewLM_17 Pfam protein_match 548062 548196 . + . Parent=LTnewLM_170018300.1:pep;Name=PF02544;signature_desc=3-oxo-5-alpha-steroid 4-dehydrogenase;Ontology_term=GO:0016627,GO:0006629,GO:0005737,GO:0016021 ### LTnewLM_17 AUGUSTUS gene 549005 553297 1 + . ID=LTnewLM_170018400 LTnewLM_17 AUGUSTUS mRNA 549005 553297 1 + . ID=LTnewLM_170018400.1;Parent=LTnewLM_170018400 LTnewLM_17 AUGUSTUS CDS 549005 553297 1 + 0 ID=LTnewLM_170018400.1:CDS:1;Parent=LTnewLM_170018400.1 ### LTnewLM_17 . polypeptide 549005 553297 . + . ID=LTnewLM_170018400.1:pep;Derives_from=LTnewLM_170018400.1;orthologous_to=LmjF.17.1110_mRNA;ortholog_cluster=OG0001541;product=term%3DMicrotubule binding/Kinesin motor domain/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225|Pfam:PF01067;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_17 Pfam protein_match 549032 549487 . + . Parent=LTnewLM_170018400.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_17 Pfam protein_match 549044 550030 . + . Parent=LTnewLM_170018400.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_17 Pfam protein_match 551165 551542 . + . Parent=LTnewLM_170018400.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III ### LTnewLM_17 AUGUSTUS gene 555692 556048 1 + . ID=LTnewLM_170018500 LTnewLM_17 AUGUSTUS mRNA 555692 556048 1 + . ID=LTnewLM_170018500.1;Parent=LTnewLM_170018500 LTnewLM_17 AUGUSTUS CDS 555692 556048 1 + 0 ID=LTnewLM_170018500.1:CDS:1;Parent=LTnewLM_170018500.1 ### LTnewLM_17 . polypeptide 555692 556048 . + . ID=LTnewLM_170018500.1:pep;Derives_from=LTnewLM_170018500.1;orthologous_to=LmjF.17.1120_mRNA;ortholog_cluster=OG0001542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 557249 560776 1 + . ID=LTnewLM_170018600 LTnewLM_17 AUGUSTUS mRNA 557249 560776 1 + . ID=LTnewLM_170018600.1;Parent=LTnewLM_170018600 LTnewLM_17 AUGUSTUS CDS 557249 560776 1 + 0 ID=LTnewLM_170018600.1:CDS:1;Parent=LTnewLM_170018600.1 ### LTnewLM_17 . polypeptide 557249 560776 . + . ID=LTnewLM_170018600.1:pep;Derives_from=LTnewLM_170018600.1;orthologous_to=LmjF.17.1130_mRNA;ortholog_cluster=OG0001543;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_17 Pfam protein_match 558629 559399 . + . Parent=LTnewLM_170018600.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_17 AUGUSTUS gene 562774 563376 1 + . ID=LTnewLM_170018700 LTnewLM_17 AUGUSTUS mRNA 562774 563376 1 + . ID=LTnewLM_170018700.1;Parent=LTnewLM_170018700 LTnewLM_17 AUGUSTUS CDS 562774 563376 1 + 0 ID=LTnewLM_170018700.1:CDS:1;Parent=LTnewLM_170018700.1 ### LTnewLM_17 . polypeptide 562774 563376 . + . ID=LTnewLM_170018700.1:pep;Derives_from=LTnewLM_170018700.1;orthologous_to=LTnewLM_320005400.1,LTnewLM_340012200.1;ortholog_cluster=OG0000357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 564183 568373 1 + . ID=LTnewLM_170018800 LTnewLM_17 AUGUSTUS mRNA 564183 568373 1 + . ID=LTnewLM_170018800.1;Parent=LTnewLM_170018800 LTnewLM_17 AUGUSTUS CDS 564183 568373 1 + 0 ID=LTnewLM_170018800.1:CDS:1;Parent=LTnewLM_170018800.1 ### LTnewLM_17 . polypeptide 564183 568373 . + . ID=LTnewLM_170018800.1:pep;Derives_from=LTnewLM_170018800.1;orthologous_to=LmjF.17.1140_mRNA;ortholog_cluster=OG0001544;product=term%3DWW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 564378 564464 . + . Parent=LTnewLM_170018800.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_17 AUGUSTUS gene 570230 573697 1 + . ID=LTnewLM_170018900 LTnewLM_17 AUGUSTUS mRNA 570230 573697 1 + . ID=LTnewLM_170018900.1;Parent=LTnewLM_170018900 LTnewLM_17 AUGUSTUS CDS 570230 573697 1 + 0 ID=LTnewLM_170018900.1:CDS:1;Parent=LTnewLM_170018900.1 ### LTnewLM_17 . polypeptide 570230 573697 . + . ID=LTnewLM_170018900.1:pep;Derives_from=LTnewLM_170018900.1;orthologous_to=LmjF.17.1150_mRNA;ortholog_cluster=OG0001545;product=term%3DXRN 5'-3' exonuclease N-terminus/Xrn1 helical domain/Zn-finger in Ran binding protein and others%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159|Pfam:PF17846|Pfam:PF00641;Ontology_term=GO:0004527,GO:0003676,GO:0008270 LTnewLM_17 Pfam protein_match 570230 571243 . + . Parent=LTnewLM_170018900.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 LTnewLM_17 Pfam protein_match 571901 572161 . + . Parent=LTnewLM_170018900.1:pep;Name=PF17846;signature_desc=Xrn1 helical domain LTnewLM_17 Pfam protein_match 572252 572767 . + . Parent=LTnewLM_170018900.1:pep;Name=PF17846;signature_desc=Xrn1 helical domain LTnewLM_17 Pfam protein_match 573512 573580 . + . Parent=LTnewLM_170018900.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 ### LTnewLM_17 AUGUSTUS gene 576043 577935 1 + . ID=LTnewLM_170019000 LTnewLM_17 AUGUSTUS mRNA 576043 577935 1 + . ID=LTnewLM_170019000.1;Parent=LTnewLM_170019000 LTnewLM_17 AUGUSTUS CDS 576043 577935 1 + 0 ID=LTnewLM_170019000.1:CDS:1;Parent=LTnewLM_170019000.1 ### LTnewLM_17 . polypeptide 576043 577935 . + . ID=LTnewLM_170019000.1:pep;Derives_from=LTnewLM_170019000.1;orthologous_to=LmjF.17.1160_mRNA;ortholog_cluster=OG0001546;product=term%3DUTP--glucose-1-phosphate uridylyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01704;Ontology_term=GO:0008152,GO:0070569 LTnewLM_17 Pfam protein_match 576346 576744 . + . Parent=LTnewLM_170019000.1:pep;Name=PF01704;signature_desc=UTP--glucose-1-phosphate uridylyltransferase;Ontology_term=GO:0070569,GO:0008152 ### LTnewLM_17 Liftoff gene 578758 580815 . + . ID=LTnewLM_170019100;coverage=0.983;sequence_ID=0.897;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.17.1170_0 LTnewLM_17 Liftoff mRNA 578758 580815 . + . ID=LTnewLM_170019100.1;Parent=LTnewLM_170019100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 578758 580815 . + 0 ID=LTnewLM_170019100.1:CDS:1;Parent=LTnewLM_170019100.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 578758 580815 . + . ID=LTnewLM_170019100.1:pep;Derives_from=LTnewLM_170019100.1;orthologous_to=LmjF.17.1170_mRNA;ortholog_cluster=OG0001547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 . pseudogene 581737 584571 . + . ID=LTnewLM_170019200:pseudogene;coverage=0.998;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.1180_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 581737 584571 . + . ID=LTnewLM_170019200.1;Parent=LTnewLM_170019200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 581737 584571 . + . ID=LTnewLM_170019200.1:pseudogenic_exon:1;Parent=LTnewLM_170019200.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 581737 584571 . + . ID=LTnewLM_170019200.1:pep;Derives_from=LTnewLM_170019200.1;orthologous_to=LmjF.17.1180_mRNA;ortholog_cluster=OG0007479;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 586191 588338 1 + . ID=LTnewLM_170019300 LTnewLM_17 AUGUSTUS mRNA 586191 588338 1 + . ID=LTnewLM_170019300.1;Parent=LTnewLM_170019300 LTnewLM_17 AUGUSTUS CDS 586191 588338 1 + 0 ID=LTnewLM_170019300.1:CDS:1;Parent=LTnewLM_170019300.1 ### LTnewLM_17 . polypeptide 586191 588338 . + . ID=LTnewLM_170019300.1:pep;Derives_from=LTnewLM_170019300.1;orthologous_to=LmjF.17.1190_mRNA;ortholog_cluster=OG0001548;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 592351 594936 1 + . ID=LTnewLM_170019400 LTnewLM_17 AUGUSTUS mRNA 592351 594936 1 + . ID=LTnewLM_170019400.1;Parent=LTnewLM_170019400 LTnewLM_17 AUGUSTUS CDS 592351 594936 1 + 0 ID=LTnewLM_170019400.1:CDS:1;Parent=LTnewLM_170019400.1 ### LTnewLM_17 . polypeptide 592351 594936 . + . ID=LTnewLM_170019400.1:pep;Derives_from=LTnewLM_170019400.1;orthologous_to=LmjF.17.1200_mRNA;ortholog_cluster=OG0001549;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 Liftoff gene 596711 598432 . + . ID=LTnewLM_170019500;coverage=0.981;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.1210_0 LTnewLM_17 Liftoff mRNA 596711 598432 . + . ID=LTnewLM_170019500.1;Parent=LTnewLM_170019500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_17 Liftoff CDS 596711 598432 . + 0 ID=LTnewLM_170019500.1:CDS:1;Parent=LTnewLM_170019500.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 596711 598432 . + . ID=LTnewLM_170019500.1:pep;Derives_from=LTnewLM_170019500.1;orthologous_to=LmjF.17.1210_mRNA;ortholog_cluster=OG0001550;product=term%3DMSP (Major sperm protein) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00635 LTnewLM_17 Pfam protein_match 597191 597391 . + . Parent=LTnewLM_170019500.1:pep;Name=PF00635;signature_desc=MSP (Major sperm protein) domain ### LTnewLM_17 AUGUSTUS gene 601430 601765 1 + . ID=LTnewLM_170019600 LTnewLM_17 AUGUSTUS mRNA 601430 601765 1 + . ID=LTnewLM_170019600.1;Parent=LTnewLM_170019600 LTnewLM_17 AUGUSTUS CDS 601430 601765 1 + 0 ID=LTnewLM_170019600.1:CDS:1;Parent=LTnewLM_170019600.1 ### LTnewLM_17 . polypeptide 601430 601765 . + . ID=LTnewLM_170019600.1:pep;Derives_from=LTnewLM_170019600.1;orthologous_to=LmjF.17.1220_mRNA;ortholog_cluster=OG0001551;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_17 Pfam protein_match 601466 601690 . + . Parent=LTnewLM_170019600.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_17 AUGUSTUS gene 603238 607848 1 + . ID=LTnewLM_170019700 LTnewLM_17 AUGUSTUS mRNA 603238 607848 1 + . ID=LTnewLM_170019700.1;Parent=LTnewLM_170019700 LTnewLM_17 AUGUSTUS CDS 603238 607848 1 + 0 ID=LTnewLM_170019700.1:CDS:1;Parent=LTnewLM_170019700.1 ### LTnewLM_17 . polypeptide 603238 607848 . + . ID=LTnewLM_170019700.1:pep;Derives_from=LTnewLM_170019700.1;orthologous_to=LmjF.17.1230_mRNA;ortholog_cluster=OG0001552;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 608723 611587 1 + . ID=LTnewLM_170019800 LTnewLM_17 AUGUSTUS mRNA 608723 611587 1 + . ID=LTnewLM_170019800.1;Parent=LTnewLM_170019800 LTnewLM_17 AUGUSTUS CDS 608723 611587 1 + 0 ID=LTnewLM_170019800.1:CDS:1;Parent=LTnewLM_170019800.1 ### LTnewLM_17 . polypeptide 608723 611587 . + . ID=LTnewLM_170019800.1:pep;Derives_from=LTnewLM_170019800.1;orthologous_to=LmjF.17.1240_mRNA;ortholog_cluster=OG0001553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 612250 615495 1 + . ID=LTnewLM_170019900 LTnewLM_17 AUGUSTUS mRNA 612250 615495 1 + . ID=LTnewLM_170019900.1;Parent=LTnewLM_170019900 LTnewLM_17 AUGUSTUS CDS 612250 615495 1 + 0 ID=LTnewLM_170019900.1:CDS:1;Parent=LTnewLM_170019900.1 ### LTnewLM_17 . polypeptide 612250 615495 . + . ID=LTnewLM_170019900.1:pep;Derives_from=LTnewLM_170019900.1;orthologous_to=LmjF.17.1250_mRNA;ortholog_cluster=OG0001554;product=term%3DtRNA(Met) cytidine acetyltransferase TmcA%2C N-terminal/Helicase/GNAT acetyltransferase 2/Possible tRNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08351|Pfam:PF05127|Pfam:PF13718|Pfam:PF13725;Ontology_term=GO:0008080 LTnewLM_17 Pfam protein_match 612328 612909 . + . Parent=LTnewLM_170019900.1:pep;Name=PF08351;signature_desc=tRNA(Met) cytidine acetyltransferase TmcA%2C N-terminal LTnewLM_17 Pfam protein_match 613168 613743 . + . Parent=LTnewLM_170019900.1:pep;Name=PF05127;signature_desc=Helicase LTnewLM_17 Pfam protein_match 613867 614616 . + . Parent=LTnewLM_170019900.1:pep;Name=PF13718;signature_desc=GNAT acetyltransferase 2;Ontology_term=GO:0008080 LTnewLM_17 Pfam protein_match 614632 615165 . + . Parent=LTnewLM_170019900.1:pep;Name=PF13725;signature_desc=Possible tRNA binding domain ### LTnewLM_17 AUGUSTUS gene 616745 618100 1 + . ID=LTnewLM_170020000 LTnewLM_17 AUGUSTUS mRNA 616745 618100 1 + . ID=LTnewLM_170020000.1;Parent=LTnewLM_170020000 LTnewLM_17 AUGUSTUS CDS 616745 618100 1 + 0 ID=LTnewLM_170020000.1:CDS:1;Parent=LTnewLM_170020000.1 ### LTnewLM_17 . polypeptide 616745 618100 . + . ID=LTnewLM_170020000.1:pep;Derives_from=LTnewLM_170020000.1;orthologous_to=LmjF.17.1260_mRNA;ortholog_cluster=OG0001555;product=term%3DOrganic solute transport protein 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10188 LTnewLM_17 Pfam protein_match 616793 617302 . + . Parent=LTnewLM_170020000.1:pep;Name=PF10188;signature_desc=Organic solute transport protein 1 ### LTnewLM_17 AUGUSTUS gene 619460 620407 1 + . ID=LTnewLM_170020100 LTnewLM_17 AUGUSTUS mRNA 619460 620407 1 + . ID=LTnewLM_170020100.1;Parent=LTnewLM_170020100 LTnewLM_17 AUGUSTUS CDS 619460 620407 1 + 0 ID=LTnewLM_170020100.1:CDS:1;Parent=LTnewLM_170020100.1 ### LTnewLM_17 . polypeptide 619460 620407 . + . ID=LTnewLM_170020100.1:pep;Derives_from=LTnewLM_170020100.1;orthologous_to=LmjF.17.1270_mRNA;ortholog_cluster=OG0001556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 621333 621536 1 + . ID=LTnewLM_170020200 LTnewLM_17 AUGUSTUS mRNA 621333 621536 1 + . ID=LTnewLM_170020200.1;Parent=LTnewLM_170020200 LTnewLM_17 AUGUSTUS CDS 621333 621536 1 + 0 ID=LTnewLM_170020200.1:CDS:1;Parent=LTnewLM_170020200.1 ### LTnewLM_17 . polypeptide 621333 621536 . + . ID=LTnewLM_170020200.1:pep;Derives_from=LTnewLM_170020200.1;orthologous_to=LmjF.17.1280_mRNA;ortholog_cluster=OG0001557;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 622457 624586 1 + . ID=LTnewLM_170020300 LTnewLM_17 AUGUSTUS mRNA 622457 624586 1 + . ID=LTnewLM_170020300.1;Parent=LTnewLM_170020300 LTnewLM_17 AUGUSTUS CDS 622457 624586 1 + 0 ID=LTnewLM_170020300.1:CDS:1;Parent=LTnewLM_170020300.1 ### LTnewLM_17 . polypeptide 622457 624586 . + . ID=LTnewLM_170020300.1:pep;Derives_from=LTnewLM_170020300.1;orthologous_to=LmjF.17.1290_mRNA;ortholog_cluster=OG0001558;product=term%3DEukaryotic translation initiation factor eIF2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08662 LTnewLM_17 Pfam protein_match 623615 624199 . + . Parent=LTnewLM_170020300.1:pep;Name=PF08662;signature_desc=Eukaryotic translation initiation factor eIF2A ### LTnewLM_17 AUGUSTUS gene 626077 627033 1 + . ID=LTnewLM_170020400 LTnewLM_17 AUGUSTUS mRNA 626077 627033 1 + . ID=LTnewLM_170020400.1;Parent=LTnewLM_170020400 LTnewLM_17 AUGUSTUS CDS 626077 627033 1 + 0 ID=LTnewLM_170020400.1:CDS:1;Parent=LTnewLM_170020400.1 ### LTnewLM_17 . polypeptide 626077 627033 . + . ID=LTnewLM_170020400.1:pep;Derives_from=LTnewLM_170020400.1;orthologous_to=LmjF.17.1300_mRNA;ortholog_cluster=OG0001559;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 628452 631598 1 + . ID=LTnewLM_170020500 LTnewLM_17 AUGUSTUS mRNA 628452 631598 1 + . ID=LTnewLM_170020500.1;Parent=LTnewLM_170020500 LTnewLM_17 AUGUSTUS CDS 628452 631598 1 + 0 ID=LTnewLM_170020500.1:CDS:1;Parent=LTnewLM_170020500.1 ### LTnewLM_17 . polypeptide 628452 631598 . + . ID=LTnewLM_170020500.1:pep;Derives_from=LTnewLM_170020500.1;orthologous_to=LmjF.17.1310_mRNA;ortholog_cluster=OG0001560;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13679 LTnewLM_17 Pfam protein_match 630693 630809 . + . Parent=LTnewLM_170020500.1:pep;Name=PF13679;signature_desc=Methyltransferase domain ### LTnewLM_17 . pseudogene 633057 634595 . + . ID=LTnewLM_170020600:pseudogene;coverage=0.963;sequence_ID=0.858;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.1315_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 633057 634595 . + . ID=LTnewLM_170020600.1;Parent=LTnewLM_170020600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 633057 634595 . + . ID=LTnewLM_170020600.1:pseudogenic_exon:1;Parent=LTnewLM_170020600.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 633057 634595 . + . ID=LTnewLM_170020600.1:pep;Derives_from=LTnewLM_170020600.1;orthologous_to=LmjF.17.1315_mRNA;ortholog_cluster=OG0007480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 634914 636677 1 + . ID=LTnewLM_170020700 LTnewLM_17 AUGUSTUS mRNA 634914 636677 1 + . ID=LTnewLM_170020700.1;Parent=LTnewLM_170020700 LTnewLM_17 AUGUSTUS CDS 634914 636677 1 + 0 ID=LTnewLM_170020700.1:CDS:1;Parent=LTnewLM_170020700.1 ### LTnewLM_17 . polypeptide 634914 636677 . + . ID=LTnewLM_170020700.1:pep;Derives_from=LTnewLM_170020700.1;orthologous_to=LmjF.17.1320_mRNA;ortholog_cluster=OG0001561;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 639884 640609 1 + . ID=LTnewLM_170020800 LTnewLM_17 AUGUSTUS mRNA 639884 640609 1 + . ID=LTnewLM_170020800.1;Parent=LTnewLM_170020800 LTnewLM_17 AUGUSTUS CDS 639884 640609 1 + 0 ID=LTnewLM_170020800.1:CDS:1;Parent=LTnewLM_170020800.1 ### LTnewLM_17 . polypeptide 639884 640609 . + . ID=LTnewLM_170020800.1:pep;Derives_from=LTnewLM_170020800.1;orthologous_to=LmjF.17.1330_mRNA;ortholog_cluster=OG0001562;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 641600 642523 1 + . ID=LTnewLM_170020900 LTnewLM_17 AUGUSTUS mRNA 641600 642523 1 + . ID=LTnewLM_170020900.1;Parent=LTnewLM_170020900 LTnewLM_17 AUGUSTUS CDS 641600 642523 1 + 0 ID=LTnewLM_170020900.1:CDS:1;Parent=LTnewLM_170020900.1 ### LTnewLM_17 . polypeptide 641600 642523 . + . ID=LTnewLM_170020900.1:pep;Derives_from=LTnewLM_170020900.1;orthologous_to=LmjF.17.1340_mRNA;ortholog_cluster=OG0001563;product=term%3DCytidylyltransferase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01467;Ontology_term=GO:0003824,GO:0009058 LTnewLM_17 Pfam protein_match 641741 642385 . + . Parent=LTnewLM_170020900.1:pep;Name=PF01467;signature_desc=Cytidylyltransferase-like;Ontology_term=GO:0003824,GO:0009058 ### LTnewLM_17 AUGUSTUS gene 643206 643865 1 + . ID=LTnewLM_170021000 LTnewLM_17 AUGUSTUS mRNA 643206 643865 1 + . ID=LTnewLM_170021000.1;Parent=LTnewLM_170021000 LTnewLM_17 AUGUSTUS CDS 643206 643865 1 + 0 ID=LTnewLM_170021000.1:CDS:1;Parent=LTnewLM_170021000.1 ### LTnewLM_17 . polypeptide 643206 643865 . + . ID=LTnewLM_170021000.1:pep;Derives_from=LTnewLM_170021000.1;orthologous_to=LmjF.17.1350_mRNA;ortholog_cluster=OG0001564;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_17 Pfam protein_match 643641 643850 . + . Parent=LTnewLM_170021000.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_17 AUGUSTUS gene 645623 647110 1 + . ID=LTnewLM_170021100 LTnewLM_17 AUGUSTUS mRNA 645623 647110 1 + . ID=LTnewLM_170021100.1;Parent=LTnewLM_170021100 LTnewLM_17 AUGUSTUS CDS 645623 647110 1 + 0 ID=LTnewLM_170021100.1:CDS:1;Parent=LTnewLM_170021100.1 ### LTnewLM_17 . polypeptide 645623 647110 . + . ID=LTnewLM_170021100.1:pep;Derives_from=LTnewLM_170021100.1;orthologous_to=LmjF.17.1360_mRNA;ortholog_cluster=OG0001565;product=term%3DFAD binding domain/D-arabinono-1%2C4-lactone oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565|Pfam:PF04030;Ontology_term=GO:0016491,GO:0016020,GO:0055114,GO:0008762,GO:0050660,GO:0003885 LTnewLM_17 Pfam protein_match 645698 646069 . + . Parent=LTnewLM_170021100.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 LTnewLM_17 Pfam protein_match 646451 647062 . + . Parent=LTnewLM_170021100.1:pep;Name=PF04030;signature_desc=D-arabinono-1%2C4-lactone oxidase;Ontology_term=GO:0003885,GO:0055114,GO:0016020 ### LTnewLM_17 AUGUSTUS gene 647511 648156 0.82 + . ID=LTnewLM_170021200 LTnewLM_17 AUGUSTUS mRNA 647511 648156 0.82 + . ID=LTnewLM_170021200.1;Parent=LTnewLM_170021200 LTnewLM_17 AUGUSTUS CDS 647511 647568 0.83 + 0 ID=LTnewLM_170021200.1:CDS:1;Parent=LTnewLM_170021200.1 LTnewLM_17 AUGUSTUS CDS 647822 648156 0.9 + 2 ID=LTnewLM_170021200.1:CDS:2;Parent=LTnewLM_170021200.1 ### LTnewLM_17 . polypeptide 647511 648156 . + . ID=LTnewLM_170021200.1:pep;Derives_from=LTnewLM_170021200.1;orthologous_to=LTnewLM_010007200.1,LTnewLM_050009500.1;ortholog_cluster=OG0000305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 648285 648500 1 + . ID=LTnewLM_170021300 LTnewLM_17 AUGUSTUS mRNA 648285 648500 1 + . ID=LTnewLM_170021300.1;Parent=LTnewLM_170021300 LTnewLM_17 AUGUSTUS CDS 648285 648500 1 + 0 ID=LTnewLM_170021300.1:CDS:1;Parent=LTnewLM_170021300.1 ### LTnewLM_17 . polypeptide 648285 648500 . + . ID=LTnewLM_170021300.1:pep;Derives_from=LTnewLM_170021300.1;orthologous_to=LTnewLM_150014300.1,LTnewLM_360035000.1;ortholog_cluster=OG0000340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 650133 652745 1 + . ID=LTnewLM_170021400 LTnewLM_17 AUGUSTUS mRNA 650133 652745 1 + . ID=LTnewLM_170021400.1;Parent=LTnewLM_170021400 LTnewLM_17 AUGUSTUS CDS 650133 652745 1 + 0 ID=LTnewLM_170021400.1:CDS:1;Parent=LTnewLM_170021400.1 ### LTnewLM_17 . polypeptide 650133 652745 . + . ID=LTnewLM_170021400.1:pep;Derives_from=LTnewLM_170021400.1;orthologous_to=LmjF.17.1370_mRNA;ortholog_cluster=OG0001566;product=term%3DNUC130/3NT domain/SDA1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08158|Pfam:PF05285 LTnewLM_17 Pfam protein_match 650304 650459 . + . Parent=LTnewLM_170021400.1:pep;Name=PF08158;signature_desc=NUC130/3NT domain LTnewLM_17 Pfam protein_match 651384 651797 . + . Parent=LTnewLM_170021400.1:pep;Name=PF05285;signature_desc=SDA1 LTnewLM_17 Pfam protein_match 651939 652730 . + . Parent=LTnewLM_170021400.1:pep;Name=PF05285;signature_desc=SDA1 ### LTnewLM_17 AUGUSTUS gene 653539 653928 1 + . ID=LTnewLM_170021500 LTnewLM_17 AUGUSTUS mRNA 653539 653928 1 + . ID=LTnewLM_170021500.1;Parent=LTnewLM_170021500 LTnewLM_17 AUGUSTUS CDS 653539 653928 1 + 0 ID=LTnewLM_170021500.1:CDS:1;Parent=LTnewLM_170021500.1 ### LTnewLM_17 . polypeptide 653539 653928 . + . ID=LTnewLM_170021500.1:pep;Derives_from=LTnewLM_170021500.1;orthologous_to=LmjF.17.1375_mRNA;ortholog_cluster=OG0001567;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 654955 657063 1 + . ID=LTnewLM_170021600 LTnewLM_17 AUGUSTUS mRNA 654955 657063 1 + . ID=LTnewLM_170021600.1;Parent=LTnewLM_170021600 LTnewLM_17 AUGUSTUS CDS 654955 657063 1 + 0 ID=LTnewLM_170021600.1:CDS:1;Parent=LTnewLM_170021600.1 ### LTnewLM_17 . polypeptide 654955 657063 . + . ID=LTnewLM_170021600.1:pep;Derives_from=LTnewLM_170021600.1;orthologous_to=LmjF.17.1380_mRNA;ortholog_cluster=OG0001568;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 656137 656193 . + . Parent=LTnewLM_170021600.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 656437 656478 . + . Parent=LTnewLM_170021600.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_17 Pfam protein_match 657004 657036 . + . Parent=LTnewLM_170021600.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_17 AUGUSTUS gene 658196 659059 1 + . ID=LTnewLM_170021700 LTnewLM_17 AUGUSTUS mRNA 658196 659059 1 + . ID=LTnewLM_170021700.1;Parent=LTnewLM_170021700 LTnewLM_17 AUGUSTUS CDS 658196 659059 1 + 0 ID=LTnewLM_170021700.1:CDS:1;Parent=LTnewLM_170021700.1 ### LTnewLM_17 . polypeptide 658196 659059 . + . ID=LTnewLM_170021700.1:pep;Derives_from=LTnewLM_170021700.1;orthologous_to=LmjF.17.1390_mRNA;ortholog_cluster=OG0001569;product=term%3DInositol monophosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00459;Ontology_term=GO:0046854 LTnewLM_17 Pfam protein_match 658244 658966 . + . Parent=LTnewLM_170021700.1:pep;Name=PF00459;signature_desc=Inositol monophosphatase family;Ontology_term=GO:0046854 ### LTnewLM_17 AUGUSTUS gene 660289 661101 1 + . ID=LTnewLM_170021800 LTnewLM_17 AUGUSTUS mRNA 660289 661101 1 + . ID=LTnewLM_170021800.1;Parent=LTnewLM_170021800 LTnewLM_17 AUGUSTUS CDS 660289 661101 1 + 0 ID=LTnewLM_170021800.1:CDS:1;Parent=LTnewLM_170021800.1 ### LTnewLM_17 . polypeptide 660289 661101 . + . ID=LTnewLM_170021800.1:pep;Derives_from=LTnewLM_170021800.1;orthologous_to=LmjF.17.1400_mRNA;ortholog_cluster=OG0001570;product=term%3DPeptidase C65 Otubain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10275 LTnewLM_17 Pfam protein_match 660346 661083 . + . Parent=LTnewLM_170021800.1:pep;Name=PF10275;signature_desc=Peptidase C65 Otubain ### LTnewLM_17 AUGUSTUS gene 665142 666635 1 + . ID=LTnewLM_170021900 LTnewLM_17 AUGUSTUS mRNA 665142 666635 1 + . ID=LTnewLM_170021900.1;Parent=LTnewLM_170021900 LTnewLM_17 AUGUSTUS CDS 665142 666635 1 + 0 ID=LTnewLM_170021900.1:CDS:1;Parent=LTnewLM_170021900.1 ### LTnewLM_17 . polypeptide 665142 666635 . + . ID=LTnewLM_170021900.1:pep;Derives_from=LTnewLM_170021900.1;orthologous_to=LmjF.17.1410_mRNA;ortholog_cluster=OG0001571;product=term%3DZPR1 zinc-finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03367;Ontology_term=GO:0008270 LTnewLM_17 Pfam protein_match 665286 665756 . + . Parent=LTnewLM_170021900.1:pep;Name=PF03367;signature_desc=ZPR1 zinc-finger domain;Ontology_term=GO:0008270 LTnewLM_17 Pfam protein_match 665940 666416 . + . Parent=LTnewLM_170021900.1:pep;Name=PF03367;signature_desc=ZPR1 zinc-finger domain;Ontology_term=GO:0008270 ### LTnewLM_17 . pseudogene 668873 669743 795 + . ID=LTnewLM_170022000:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.16.0880:mRNA 11 308;original_prot_length=311 LTnewLM_17 . pseudogenic_transcript 668873 669743 . + . ID=LTnewLM_170022000.1;Parent=LTnewLM_170022000:pseudogene LTnewLM_17 . pseudogenic_exon 668873 669040 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:1;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669042 669083 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:2;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669085 669126 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:3;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669128 669190 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:4;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669192 669245 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:5;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669248 669487 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:6;Parent=LTnewLM_170022000.1 LTnewLM_17 . pseudogenic_exon 669489 669743 . + . ID=LTnewLM_170022000.1:pseudogenic_exon:7;Parent=LTnewLM_170022000.1 ### LTnewLM_17 . polypeptide 668873 669743 . + . ID=LTnewLM_170022000.1:pep;Derives_from=LTnewLM_170022000.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 670208 670981 1 + . ID=LTnewLM_170022100 LTnewLM_17 AUGUSTUS mRNA 670208 670981 1 + . ID=LTnewLM_170022100.1;Parent=LTnewLM_170022100 LTnewLM_17 AUGUSTUS CDS 670208 670981 1 + 0 ID=LTnewLM_170022100.1:CDS:1;Parent=LTnewLM_170022100.1 ### LTnewLM_17 . polypeptide 670208 670981 . + . ID=LTnewLM_170022100.1:pep;Derives_from=LTnewLM_170022100.1;orthologous_to=LmjF.17.1420_mRNA;ortholog_cluster=OG0001572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_17 AUGUSTUS gene 671741 672460 1 + . ID=LTnewLM_170022200 LTnewLM_17 AUGUSTUS mRNA 671741 672460 1 + . ID=LTnewLM_170022200.1;Parent=LTnewLM_170022200 LTnewLM_17 AUGUSTUS CDS 671741 672460 1 + 0 ID=LTnewLM_170022200.1:CDS:1;Parent=LTnewLM_170022200.1 ### LTnewLM_17 . polypeptide 671741 672460 . + . ID=LTnewLM_170022200.1:pep;Derives_from=LTnewLM_170022200.1;product=term%3Dhypothetical protein ### LTnewLM_17 AUGUSTUS gene 673787 675334 1 + . ID=LTnewLM_170022300 LTnewLM_17 AUGUSTUS mRNA 673787 675334 1 + . ID=LTnewLM_170022300.1;Parent=LTnewLM_170022300 LTnewLM_17 AUGUSTUS CDS 673787 675334 1 + 0 ID=LTnewLM_170022300.1:CDS:1;Parent=LTnewLM_170022300.1 ### LTnewLM_17 . polypeptide 673787 675334 . + . ID=LTnewLM_170022300.1:pep;Derives_from=LTnewLM_170022300.1;orthologous_to=LmjF.17.1430_mRNA;ortholog_cluster=OG0001573;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_17 Pfam protein_match 674003 674989 . + . Parent=LTnewLM_170022300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_17 AUGUSTUS gene 676791 681527 1 + . ID=LTnewLM_170022400 LTnewLM_17 AUGUSTUS mRNA 676791 681527 1 + . ID=LTnewLM_170022400.1;Parent=LTnewLM_170022400 LTnewLM_17 AUGUSTUS CDS 676791 681527 1 + 0 ID=LTnewLM_170022400.1:CDS:1;Parent=LTnewLM_170022400.1 ### LTnewLM_17 . polypeptide 676791 681527 . + . ID=LTnewLM_170022400.1:pep;Derives_from=LTnewLM_170022400.1;orthologous_to=LmjF.17.1440_mRNA;ortholog_cluster=OG0001574;product=term%3DIon transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00520;Ontology_term=GO:0016020,GO:0055085,GO:0006811,GO:0005216 LTnewLM_17 Pfam protein_match 676965 677768 . + . Parent=LTnewLM_170022400.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_17 Pfam protein_match 678207 678830 . + . Parent=LTnewLM_170022400.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_17 Pfam protein_match 679173 679988 . + . Parent=LTnewLM_170022400.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_17 Pfam protein_match 680187 680843 . + . Parent=LTnewLM_170022400.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 ### LTnewLM_17 AUGUSTUS gene 682162 683628 1 + . ID=LTnewLM_170022500 LTnewLM_17 AUGUSTUS mRNA 682162 683628 1 + . ID=LTnewLM_170022500.1;Parent=LTnewLM_170022500 LTnewLM_17 AUGUSTUS CDS 682162 683628 1 + 0 ID=LTnewLM_170022500.1:CDS:1;Parent=LTnewLM_170022500.1 ### LTnewLM_17 . polypeptide 682162 683628 . + . ID=LTnewLM_170022500.1:pep;Derives_from=LTnewLM_170022500.1;orthologous_to=LmjF.17.1450_mRNA;ortholog_cluster=OG0001575;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_17 Pfam protein_match 682609 683175 . + . Parent=LTnewLM_170022500.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_17 AUGUSTUS gene 686836 687993 1 + . ID=LTnewLM_170022600 LTnewLM_17 AUGUSTUS mRNA 686836 687993 1 + . ID=LTnewLM_170022600.1;Parent=LTnewLM_170022600 LTnewLM_17 AUGUSTUS CDS 686836 687993 1 + 0 ID=LTnewLM_170022600.1:CDS:1;Parent=LTnewLM_170022600.1 ### LTnewLM_17 . polypeptide 686836 687993 . + . ID=LTnewLM_170022600.1:pep;Derives_from=LTnewLM_170022600.1;orthologous_to=LmjF.17.1460_mRNA;ortholog_cluster=OG0001576;product=term%3DFerrochelatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00762;Ontology_term=GO:0006783,GO:0004325 LTnewLM_17 Pfam protein_match 686860 687723 . + . Parent=LTnewLM_170022600.1:pep;Name=PF00762;signature_desc=Ferrochelatase;Ontology_term=GO:0004325,GO:0006783 LTnewLM_17 Pfam protein_match 687814 687981 . + . Parent=LTnewLM_170022600.1:pep;Name=PF00762;signature_desc=Ferrochelatase;Ontology_term=GO:0004325,GO:0006783 ### LTnewLM_17 . pseudogene 688740 689473 . + . ID=LTnewLM_170022700:pseudogene;coverage=1.0;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.17.1470_0;has_internal_stop=true LTnewLM_17 . pseudogenic_transcript 688740 689473 . + . ID=LTnewLM_170022700.1;Parent=LTnewLM_170022700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_17 . pseudogenic_exon 688740 689473 . + . ID=LTnewLM_170022700.1:pseudogenic_exon:1;Parent=LTnewLM_170022700.1;extra_copy_number=0 ### LTnewLM_17 . polypeptide 688740 689473 . + . ID=LTnewLM_170022700.1:pep;Derives_from=LTnewLM_170022700.1;orthologous_to=LTnewLM_210028600.1,LmjF.17.1470_mRNA,LmjF.21.1880_mRNA;ortholog_cluster=OG0000159;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . contig 1 721580 . + . Name=LTnewLM_CTG000017 LTnewLM_18 AUGUSTUS gene 1841 4849 1 - . ID=LTnewLM_180005000 LTnewLM_18 AUGUSTUS mRNA 1841 4849 1 - . ID=LTnewLM_180005000.1;Parent=LTnewLM_180005000 LTnewLM_18 AUGUSTUS CDS 1841 4849 1 - 0 ID=LTnewLM_180005000.1:CDS:1;Parent=LTnewLM_180005000.1 ### LTnewLM_18 . polypeptide 1841 4849 . - . ID=LTnewLM_180005000.1:pep;Derives_from=LTnewLM_180005000.1;orthologous_to=LmjF.18.0010_mRNA;ortholog_cluster=OG0001577;product=term%3DPentatricopeptide repeat domain/PPR repeat/PPR repeat family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13812|Pfam:PF01535|Pfam:PF13041 LTnewLM_18 Pfam protein_match 2342 2422 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_18 Pfam protein_match 2396 2533 . - . Parent=LTnewLM_180005000.1:pep;Name=PF13041;signature_desc=PPR repeat family LTnewLM_18 Pfam protein_match 2462 2527 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_18 Pfam protein_match 2546 2632 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_18 Pfam protein_match 2660 2740 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_18 Pfam protein_match 2972 3052 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_18 Pfam protein_match 2975 3091 . - . Parent=LTnewLM_180005000.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_18 Pfam protein_match 3440 3616 . - . Parent=LTnewLM_180005000.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_18 Pfam protein_match 3545 3688 . - . Parent=LTnewLM_180005000.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_18 Pfam protein_match 3590 3676 . - . Parent=LTnewLM_180005000.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_18 AUGUSTUS gene 5343 6160 0.55 - . ID=LTnewLM_180005100 LTnewLM_18 AUGUSTUS mRNA 5343 6160 0.55 - . ID=LTnewLM_180005100.1;Parent=LTnewLM_180005100 LTnewLM_18 AUGUSTUS CDS 5343 5522 0.55 - 0 ID=LTnewLM_180005100.1:CDS:1;Parent=LTnewLM_180005100.1 LTnewLM_18 AUGUSTUS CDS 6062 6160 0.8 - 0 ID=LTnewLM_180005100.1:CDS:2;Parent=LTnewLM_180005100.1 ### LTnewLM_18 . polypeptide 5343 6160 . - . ID=LTnewLM_180005100.1:pep;Derives_from=LTnewLM_180005100.1;product=term%3Dhypothetical protein ### LTnewLM_18 . pseudogene 6926 8079 . - . ID=LTnewLM_180005200:pseudogene;coverage=1.0;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0020_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 6926 8079 . - . ID=LTnewLM_180005200.1;Parent=LTnewLM_180005200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 6926 8079 . - . ID=LTnewLM_180005200.1:pseudogenic_exon:1;Parent=LTnewLM_180005200.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 6926 8079 . - . ID=LTnewLM_180005200.1:pep;Derives_from=LTnewLM_180005200.1;orthologous_to=LmjF.18.0020_mRNA;ortholog_cluster=OG0007481;product=term%3DGHMP kinases N terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00288;Ontology_term=GO:0005524 LTnewLM_18 Pfam protein_match 7642 7779 . - . Parent=LTnewLM_180005200.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 ### LTnewLM_18 AUGUSTUS gene 8879 9913 1 - . ID=LTnewLM_180005300 LTnewLM_18 AUGUSTUS mRNA 8879 9913 1 - . ID=LTnewLM_180005300.1;Parent=LTnewLM_180005300 LTnewLM_18 AUGUSTUS CDS 8879 9913 1 - 0 ID=LTnewLM_180005300.1:CDS:1;Parent=LTnewLM_180005300.1 ### LTnewLM_18 . polypeptide 8879 9913 . - . ID=LTnewLM_180005300.1:pep;Derives_from=LTnewLM_180005300.1;orthologous_to=LmjF.18.0030_mRNA;ortholog_cluster=OG0001578;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 9686 9865 . - . Parent=LTnewLM_180005300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 AUGUSTUS gene 10360 11976 1 - . ID=LTnewLM_180005400 LTnewLM_18 AUGUSTUS mRNA 10360 11976 1 - . ID=LTnewLM_180005400.1;Parent=LTnewLM_180005400 LTnewLM_18 AUGUSTUS CDS 10360 11976 1 - 0 ID=LTnewLM_180005400.1:CDS:1;Parent=LTnewLM_180005400.1 ### LTnewLM_18 . polypeptide 10360 11976 . - . ID=LTnewLM_180005400.1:pep;Derives_from=LTnewLM_180005400.1;orthologous_to=LmjF.18.0040_mRNA;ortholog_cluster=OG0001579;product=term%3DMajor Facilitator Superfamily/Sugar (and other) transporter/Uncharacterised MFS-type transporter YbfB%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF00083|Pfam:PF06779;Ontology_term=GO:0055085,GO:0022857,GO:0016021 LTnewLM_18 Pfam protein_match 10789 11838 . - . Parent=LTnewLM_180005400.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_18 Pfam protein_match 11185 11751 . - . Parent=LTnewLM_180005400.1:pep;Name=PF06779;signature_desc=Uncharacterised MFS-type transporter YbfB LTnewLM_18 Pfam protein_match 11290 11763 . - . Parent=LTnewLM_180005400.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_18 AUGUSTUS gene 12852 15776 1 - . ID=LTnewLM_180005500 LTnewLM_18 AUGUSTUS mRNA 12852 15776 1 - . ID=LTnewLM_180005500.1;Parent=LTnewLM_180005500 LTnewLM_18 AUGUSTUS CDS 12852 15776 1 - 0 ID=LTnewLM_180005500.1:CDS:1;Parent=LTnewLM_180005500.1 ### LTnewLM_18 . polypeptide 12852 15776 . - . ID=LTnewLM_180005500.1:pep;Derives_from=LTnewLM_180005500.1;orthologous_to=LmjF.18.0050_mRNA;ortholog_cluster=OG0001580;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 16590 17063 1 - . ID=LTnewLM_180005600 LTnewLM_18 AUGUSTUS mRNA 16590 17063 1 - . ID=LTnewLM_180005600.1;Parent=LTnewLM_180005600 LTnewLM_18 AUGUSTUS CDS 16590 17063 1 - 0 ID=LTnewLM_180005600.1:CDS:1;Parent=LTnewLM_180005600.1 ### LTnewLM_18 . polypeptide 16590 17063 . - . ID=LTnewLM_180005600.1:pep;Derives_from=LTnewLM_180005600.1;orthologous_to=LmjF.18.0060_mRNA;ortholog_cluster=OG0001581;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 17892 18191 1 - . ID=LTnewLM_180005700 LTnewLM_18 AUGUSTUS mRNA 17892 18191 1 - . ID=LTnewLM_180005700.1;Parent=LTnewLM_180005700 LTnewLM_18 AUGUSTUS CDS 17892 18191 1 - 0 ID=LTnewLM_180005700.1:CDS:1;Parent=LTnewLM_180005700.1 ### LTnewLM_18 . polypeptide 17892 18191 . - . ID=LTnewLM_180005700.1:pep;Derives_from=LTnewLM_180005700.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 19278 21452 1 - . ID=LTnewLM_180005800 LTnewLM_18 AUGUSTUS mRNA 19278 21452 1 - . ID=LTnewLM_180005800.1;Parent=LTnewLM_180005800 LTnewLM_18 AUGUSTUS CDS 19278 21452 1 - 0 ID=LTnewLM_180005800.1:CDS:1;Parent=LTnewLM_180005800.1 ### LTnewLM_18 . polypeptide 19278 21452 . - . ID=LTnewLM_180005800.1:pep;Derives_from=LTnewLM_180005800.1;orthologous_to=LmjF.18.0070_mRNA;ortholog_cluster=OG0001582;product=term%3Dzinc-finger of a C2HC-type/Double zinc ribbon%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13913|Pfam:PF12773 LTnewLM_18 Pfam protein_match 19326 19391 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_18 Pfam protein_match 19632 19700 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_18 Pfam protein_match 20145 20336 . - . Parent=LTnewLM_180005800.1:pep;Name=PF12773;signature_desc=Double zinc ribbon LTnewLM_18 Pfam protein_match 20688 20759 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_18 Pfam protein_match 20910 20969 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_18 Pfam protein_match 21117 21188 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_18 Pfam protein_match 21339 21401 . - . Parent=LTnewLM_180005800.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type ### LTnewLM_18 AUGUSTUS gene 22602 24041 1 - . ID=LTnewLM_180005900 LTnewLM_18 AUGUSTUS mRNA 22602 24041 1 - . ID=LTnewLM_180005900.1;Parent=LTnewLM_180005900 LTnewLM_18 AUGUSTUS CDS 22602 24041 1 - 0 ID=LTnewLM_180005900.1:CDS:1;Parent=LTnewLM_180005900.1 ### LTnewLM_18 . polypeptide 22602 24041 . - . ID=LTnewLM_180005900.1:pep;Derives_from=LTnewLM_180005900.1;orthologous_to=LmjF.18.0080_mRNA;ortholog_cluster=OG0001583;product=term%3DNAD dependent epimerase/dehydratase family/3-beta hydroxysteroid dehydrogenase/isomerase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01370|Pfam:PF01073;Ontology_term=GO:0003824,GO:0003854,GO:0050662,GO:0055114,GO:0016616,GO:0006694 LTnewLM_18 Pfam protein_match 23400 23768 . - . Parent=LTnewLM_180005900.1:pep;Name=PF01073;signature_desc=3-beta hydroxysteroid dehydrogenase/isomerase family;Ontology_term=GO:0003854,GO:0016616,GO:0006694,GO:0055114 LTnewLM_18 Pfam protein_match 23424 23774 . - . Parent=LTnewLM_180005900.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 ### LTnewLM_18 AUGUSTUS gene 25429 27867 1 - . ID=LTnewLM_180006000 LTnewLM_18 AUGUSTUS mRNA 25429 27867 1 - . ID=LTnewLM_180006000.1;Parent=LTnewLM_180006000 LTnewLM_18 AUGUSTUS CDS 25429 27867 1 - 0 ID=LTnewLM_180006000.1:CDS:1;Parent=LTnewLM_180006000.1 ### LTnewLM_18 . polypeptide 25429 27867 . - . ID=LTnewLM_180006000.1:pep;Derives_from=LTnewLM_180006000.1;orthologous_to=LmjF.18.0090_mRNA;ortholog_cluster=OG0001584;product=term%3DGalactose mutarotase-like/Glycosyl hydrolases family 31/Domain of unknown function (DUF5110)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13802|Pfam:PF01055|Pfam:PF17137;Ontology_term=GO:0004553,GO:0005975 LTnewLM_18 Pfam protein_match 25684 25800 . - . Parent=LTnewLM_180006000.1:pep;Name=PF17137;signature_desc=Domain of unknown function (DUF5110) LTnewLM_18 Pfam protein_match 25858 27204 . - . Parent=LTnewLM_180006000.1:pep;Name=PF01055;signature_desc=Glycosyl hydrolases family 31;Ontology_term=GO:0004553,GO:0005975 LTnewLM_18 Pfam protein_match 27274 27465 . - . Parent=LTnewLM_180006000.1:pep;Name=PF13802;signature_desc=Galactose mutarotase-like ### LTnewLM_18 . pseudogene 28651 30012 . - . ID=LTnewLM_180006100:pseudogene;coverage=1.0;sequence_ID=0.937;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0100_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 28651 30012 . - . ID=LTnewLM_180006100.1;Parent=LTnewLM_180006100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 28651 30012 . - . ID=LTnewLM_180006100.1:pseudogenic_exon:1;Parent=LTnewLM_180006100.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 28651 30012 . - . ID=LTnewLM_180006100.1:pep;Derives_from=LTnewLM_180006100.1;orthologous_to=LmjF.18.0100_mRNA;ortholog_cluster=OG0007482;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 30519 34976 1 - . ID=LTnewLM_180006200 LTnewLM_18 AUGUSTUS mRNA 30519 34976 1 - . ID=LTnewLM_180006200.1;Parent=LTnewLM_180006200 LTnewLM_18 AUGUSTUS CDS 30519 34976 1 - 0 ID=LTnewLM_180006200.1:CDS:1;Parent=LTnewLM_180006200.1 ### LTnewLM_18 . polypeptide 30519 34976 . - . ID=LTnewLM_180006200.1:pep;Derives_from=LTnewLM_180006200.1;orthologous_to=LmjF.18.0110_mRNA;ortholog_cluster=OG0001585;product=term%3DProtein of unknown function (DUF726)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05277 LTnewLM_18 Pfam protein_match 31971 32657 . - . Parent=LTnewLM_180006200.1:pep;Name=PF05277;signature_desc=Protein of unknown function (DUF726) ### LTnewLM_18 AUGUSTUS gene 36485 36868 1 - . ID=LTnewLM_180006300 LTnewLM_18 AUGUSTUS mRNA 36485 36868 1 - . ID=LTnewLM_180006300.1;Parent=LTnewLM_180006300 LTnewLM_18 AUGUSTUS CDS 36485 36868 1 - 0 ID=LTnewLM_180006300.1:CDS:1;Parent=LTnewLM_180006300.1 ### LTnewLM_18 . polypeptide 36485 36868 . - . ID=LTnewLM_180006300.1:pep;Derives_from=LTnewLM_180006300.1;orthologous_to=LmjF.18.0120_mRNA;ortholog_cluster=OG0001586;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 37841 39952 1 - . ID=LTnewLM_180006400 LTnewLM_18 AUGUSTUS mRNA 37841 39952 1 - . ID=LTnewLM_180006400.1;Parent=LTnewLM_180006400 LTnewLM_18 AUGUSTUS CDS 37841 39952 1 - 0 ID=LTnewLM_180006400.1:CDS:1;Parent=LTnewLM_180006400.1 ### LTnewLM_18 . polypeptide 37841 39952 . - . ID=LTnewLM_180006400.1:pep;Derives_from=LTnewLM_180006400.1;orthologous_to=LmjF.18.0130_mRNA;ortholog_cluster=OG0001587;product=term%3DCyclin M transmembrane N-terminal domain/CBS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595|Pfam:PF00571 LTnewLM_18 Pfam protein_match 39050 39205 . - . Parent=LTnewLM_180006400.1:pep;Name=PF00571;signature_desc=CBS domain LTnewLM_18 Pfam protein_match 39296 39793 . - . Parent=LTnewLM_180006400.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_18 AUGUSTUS gene 42030 44267 1 - . ID=LTnewLM_180006500 LTnewLM_18 AUGUSTUS mRNA 42030 44267 1 - . ID=LTnewLM_180006500.1;Parent=LTnewLM_180006500 LTnewLM_18 AUGUSTUS CDS 42030 44267 1 - 0 ID=LTnewLM_180006500.1:CDS:1;Parent=LTnewLM_180006500.1 ### LTnewLM_18 . polypeptide 42030 44267 . - . ID=LTnewLM_180006500.1:pep;Derives_from=LTnewLM_180006500.1;orthologous_to=LmjF.18.0140_mRNA;ortholog_cluster=OG0001588;product=term%3DCyclin M transmembrane N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595 LTnewLM_18 Pfam protein_match 43506 44057 . - . Parent=LTnewLM_180006500.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_18 AUGUSTUS gene 46643 48052 1 - . ID=LTnewLM_180006600 LTnewLM_18 AUGUSTUS mRNA 46643 48052 1 - . ID=LTnewLM_180006600.1;Parent=LTnewLM_180006600 LTnewLM_18 AUGUSTUS CDS 46643 48052 1 - 0 ID=LTnewLM_180006600.1:CDS:1;Parent=LTnewLM_180006600.1 ### LTnewLM_18 . polypeptide 46643 48052 . - . ID=LTnewLM_180006600.1:pep;Derives_from=LTnewLM_180006600.1;orthologous_to=LmjF.18.0150_mRNA;ortholog_cluster=OG0001589;product=term%3DTetratricopeptide repeat/PPP5 TPR repeat region/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF08321|Pfam:PF00149;Ontology_term=GO:0016787,GO:0005515 LTnewLM_18 Pfam protein_match 46850 47428 . - . Parent=LTnewLM_180006600.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 LTnewLM_18 Pfam protein_match 47459 47719 . - . Parent=LTnewLM_180006600.1:pep;Name=PF08321;signature_desc=PPP5 TPR repeat region LTnewLM_18 Pfam protein_match 47756 47839 . - . Parent=LTnewLM_180006600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 47960 48022 . - . Parent=LTnewLM_180006600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_18 AUGUSTUS gene 48883 51000 1 - . ID=LTnewLM_180006700 LTnewLM_18 AUGUSTUS mRNA 48883 51000 1 - . ID=LTnewLM_180006700.1;Parent=LTnewLM_180006700 LTnewLM_18 AUGUSTUS CDS 48883 51000 1 - 0 ID=LTnewLM_180006700.1:CDS:1;Parent=LTnewLM_180006700.1 ### LTnewLM_18 . polypeptide 48883 51000 . - . ID=LTnewLM_180006700.1:pep;Derives_from=LTnewLM_180006700.1;orthologous_to=LmjF.18.0160_mRNA;ortholog_cluster=OG0001590;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_18 Pfam protein_match 49468 49890 . - . Parent=LTnewLM_180006700.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_18 AUGUSTUS gene 59924 60967 1 - . ID=LTnewLM_180006800 LTnewLM_18 AUGUSTUS mRNA 59924 60967 1 - . ID=LTnewLM_180006800.1;Parent=LTnewLM_180006800 LTnewLM_18 AUGUSTUS CDS 59924 60967 1 - 0 ID=LTnewLM_180006800.1:CDS:1;Parent=LTnewLM_180006800.1 ### LTnewLM_18 . polypeptide 59924 60967 . - . ID=LTnewLM_180006800.1:pep;Derives_from=LTnewLM_180006800.1;orthologous_to=LmjF.18.0170_mRNA;ortholog_cluster=OG0001591;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 60410 60607 . - . Parent=LTnewLM_180006800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 60680 60886 . - . Parent=LTnewLM_180006800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 AUGUSTUS gene 70156 71202 1 - . ID=LTnewLM_180006900 LTnewLM_18 AUGUSTUS mRNA 70156 71202 1 - . ID=LTnewLM_180006900.1;Parent=LTnewLM_180006900 LTnewLM_18 AUGUSTUS CDS 70156 71202 1 - 0 ID=LTnewLM_180006900.1:CDS:1;Parent=LTnewLM_180006900.1 ### LTnewLM_18 . polypeptide 70156 71202 . - . ID=LTnewLM_180006900.1:pep;Derives_from=LTnewLM_180006900.1;orthologous_to=LmjF.18.0180_mRNA,LmjF.29.1370_mRNA;ortholog_cluster=OG0000358;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 70666 70863 . - . Parent=LTnewLM_180006900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 70936 71142 . - . Parent=LTnewLM_180006900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 AUGUSTUS gene 86754 87782 1 - . ID=LTnewLM_180007000 LTnewLM_18 AUGUSTUS mRNA 86754 87782 1 - . ID=LTnewLM_180007000.1;Parent=LTnewLM_180007000 LTnewLM_18 AUGUSTUS CDS 86754 87782 1 - 0 ID=LTnewLM_180007000.1:CDS:1;Parent=LTnewLM_180007000.1 ### LTnewLM_18 . polypeptide 86754 87782 . - . ID=LTnewLM_180007000.1:pep;Derives_from=LTnewLM_180007000.1;orthologous_to=LmjF.18.0190_mRNA;ortholog_cluster=OG0001592;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 87231 87428 . - . Parent=LTnewLM_180007000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 87501 87707 . - . Parent=LTnewLM_180007000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 AUGUSTUS gene 98313 99791 1 - . ID=LTnewLM_180007100 LTnewLM_18 AUGUSTUS mRNA 98313 99791 1 - . ID=LTnewLM_180007100.1;Parent=LTnewLM_180007100 LTnewLM_18 AUGUSTUS CDS 98313 99791 1 - 0 ID=LTnewLM_180007100.1:CDS:1;Parent=LTnewLM_180007100.1 ### LTnewLM_18 . polypeptide 98313 99791 . - . ID=LTnewLM_180007100.1:pep;Derives_from=LTnewLM_180007100.1;orthologous_to=LmjF.18.0200_mRNA;ortholog_cluster=OG0001593;product=term%3DNAD(P)-binding Rossmann-like domain/Flavin containing amine oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13450|Pfam:PF01593;Ontology_term=GO:0055114,GO:0016491 LTnewLM_18 Pfam protein_match 98844 99749 . - . Parent=LTnewLM_180007100.1:pep;Name=PF01593;signature_desc=Flavin containing amine oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_18 Pfam protein_match 99579 99767 . - . Parent=LTnewLM_180007100.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_18 AUGUSTUS gene 101231 102286 1 - . ID=LTnewLM_180007200 LTnewLM_18 AUGUSTUS mRNA 101231 102286 1 - . ID=LTnewLM_180007200.1;Parent=LTnewLM_180007200 LTnewLM_18 AUGUSTUS CDS 101231 102286 1 - 0 ID=LTnewLM_180007200.1:CDS:1;Parent=LTnewLM_180007200.1 ### LTnewLM_18 . polypeptide 101231 102286 . - . ID=LTnewLM_180007200.1:pep;Derives_from=LTnewLM_180007200.1;orthologous_to=LmjF.18.0210_mRNA;ortholog_cluster=OG0001594;product=term%3DActivator of Hsp90 ATPase%2C N-terminal/Activator of Hsp90 ATPase homolog 1-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09229|Pfam:PF08327;Ontology_term=GO:0006950,GO:0001671,GO:0051087 LTnewLM_18 Pfam protein_match 101258 101602 . - . Parent=LTnewLM_180007200.1:pep;Name=PF08327;signature_desc=Activator of Hsp90 ATPase homolog 1-like protein;Ontology_term=GO:0006950 LTnewLM_18 Pfam protein_match 101792 102202 . - . Parent=LTnewLM_180007200.1:pep;Name=PF09229;signature_desc=Activator of Hsp90 ATPase%2C N-terminal;Ontology_term=GO:0001671,GO:0051087 ### LTnewLM_18 AUGUSTUS gene 104160 105389 1 - . ID=LTnewLM_180007300 LTnewLM_18 AUGUSTUS mRNA 104160 105389 1 - . ID=LTnewLM_180007300.1;Parent=LTnewLM_180007300 LTnewLM_18 AUGUSTUS CDS 104160 105389 1 - 0 ID=LTnewLM_180007300.1:CDS:1;Parent=LTnewLM_180007300.1 ### LTnewLM_18 . polypeptide 104160 105389 . - . ID=LTnewLM_180007300.1:pep;Derives_from=LTnewLM_180007300.1;orthologous_to=LmjF.18.0220_mRNA;ortholog_cluster=OG0001595;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 105156 105353 . - . Parent=LTnewLM_180007300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 AUGUSTUS gene 107801 108697 1 - . ID=LTnewLM_180007400 LTnewLM_18 AUGUSTUS mRNA 107801 108697 1 - . ID=LTnewLM_180007400.1;Parent=LTnewLM_180007400 LTnewLM_18 AUGUSTUS CDS 107801 108697 1 - 0 ID=LTnewLM_180007400.1:CDS:1;Parent=LTnewLM_180007400.1 ### LTnewLM_18 . polypeptide 107801 108697 . - . ID=LTnewLM_180007400.1:pep;Derives_from=LTnewLM_180007400.1;orthologous_to=LmjF.18.0230_mRNA;ortholog_cluster=OG0001596;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 110675 111889 1 - . ID=LTnewLM_180007500 LTnewLM_18 AUGUSTUS mRNA 110675 111889 1 - . ID=LTnewLM_180007500.1;Parent=LTnewLM_180007500 LTnewLM_18 AUGUSTUS CDS 110675 111889 1 - 0 ID=LTnewLM_180007500.1:CDS:1;Parent=LTnewLM_180007500.1 ### LTnewLM_18 . polypeptide 110675 111889 . - . ID=LTnewLM_180007500.1:pep;Derives_from=LTnewLM_180007500.1;orthologous_to=LmjF.18.0240_mRNA;ortholog_cluster=OG0001597;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 112559 113299 1 - . ID=LTnewLM_180007600 LTnewLM_18 AUGUSTUS mRNA 112559 113299 1 - . ID=LTnewLM_180007600.1;Parent=LTnewLM_180007600 LTnewLM_18 AUGUSTUS CDS 112559 113299 1 - 0 ID=LTnewLM_180007600.1:CDS:1;Parent=LTnewLM_180007600.1 ### LTnewLM_18 . polypeptide 112559 113299 . - . ID=LTnewLM_180007600.1:pep;Derives_from=LTnewLM_180007600.1;orthologous_to=LmjF.18.0250_mRNA;ortholog_cluster=OG0001598;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 114155 114511 1 - . ID=LTnewLM_180007700 LTnewLM_18 AUGUSTUS mRNA 114155 114511 1 - . ID=LTnewLM_180007700.1;Parent=LTnewLM_180007700 LTnewLM_18 AUGUSTUS CDS 114155 114511 1 - 0 ID=LTnewLM_180007700.1:CDS:1;Parent=LTnewLM_180007700.1 ### LTnewLM_18 . polypeptide 114155 114511 . - . ID=LTnewLM_180007700.1:pep;Derives_from=LTnewLM_180007700.1;orthologous_to=LmjF.18.0260_mRNA;ortholog_cluster=OG0001599;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 122055 123122 1 - . ID=LTnewLM_180007800 LTnewLM_18 AUGUSTUS mRNA 122055 123122 1 - . ID=LTnewLM_180007800.1;Parent=LTnewLM_180007800 LTnewLM_18 AUGUSTUS CDS 122055 123122 1 - 0 ID=LTnewLM_180007800.1:CDS:1;Parent=LTnewLM_180007800.1 ### LTnewLM_18 . polypeptide 122055 123122 . - . ID=LTnewLM_180007800.1:pep;Derives_from=LTnewLM_180007800.1;orthologous_to=LmjF.18.0270_mRNA;ortholog_cluster=OG0001600;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_18 Pfam protein_match 122187 123062 . - . Parent=LTnewLM_180007800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_18 Pfam protein_match 122454 123059 . - . Parent=LTnewLM_180007800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_18 AUGUSTUS gene 126287 128401 1 - . ID=LTnewLM_180007900 LTnewLM_18 AUGUSTUS mRNA 126287 128401 1 - . ID=LTnewLM_180007900.1;Parent=LTnewLM_180007900 LTnewLM_18 AUGUSTUS CDS 126287 128401 1 - 0 ID=LTnewLM_180007900.1:CDS:1;Parent=LTnewLM_180007900.1 ### LTnewLM_18 . polypeptide 126287 128401 . - . ID=LTnewLM_180007900.1:pep;Derives_from=LTnewLM_180007900.1;orthologous_to=LmjF.18.0280_mRNA;ortholog_cluster=OG0001601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 129928 130941 1 - . ID=LTnewLM_180008000 LTnewLM_18 AUGUSTUS mRNA 129928 130941 1 - . ID=LTnewLM_180008000.1;Parent=LTnewLM_180008000 LTnewLM_18 AUGUSTUS CDS 129928 130941 1 - 0 ID=LTnewLM_180008000.1:CDS:1;Parent=LTnewLM_180008000.1 ### LTnewLM_18 . polypeptide 129928 130941 . - . ID=LTnewLM_180008000.1:pep;Derives_from=LTnewLM_180008000.1;orthologous_to=LmjF.18.0290_mRNA;ortholog_cluster=OG0001602;product=term%3DDephospho-CoA kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01121;Ontology_term=GO:0004140,GO:0015937,GO:0005524 LTnewLM_18 Pfam protein_match 130069 130251 . - . Parent=LTnewLM_180008000.1:pep;Name=PF01121;signature_desc=Dephospho-CoA kinase;Ontology_term=GO:0004140,GO:0005524,GO:0015937 ### LTnewLM_18 AUGUSTUS gene 132681 133805 1 - . ID=LTnewLM_180008100 LTnewLM_18 AUGUSTUS mRNA 132681 133805 1 - . ID=LTnewLM_180008100.1;Parent=LTnewLM_180008100 LTnewLM_18 AUGUSTUS CDS 132681 133805 1 - 0 ID=LTnewLM_180008100.1:CDS:1;Parent=LTnewLM_180008100.1 ### LTnewLM_18 . polypeptide 132681 133805 . - . ID=LTnewLM_180008100.1:pep;Derives_from=LTnewLM_180008100.1;orthologous_to=LmjF.18.0300_mRNA;ortholog_cluster=OG0001603;product=term%3DNuclear transport factor 2 (NTF2) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02136;Ontology_term=GO:0006810,GO:0005622 LTnewLM_18 Pfam protein_match 133443 133766 . - . Parent=LTnewLM_180008100.1:pep;Name=PF02136;signature_desc=Nuclear transport factor 2 (NTF2) domain;Ontology_term=GO:0006810,GO:0005622 ### LTnewLM_18 AUGUSTUS gene 135319 135627 1 - . ID=LTnewLM_180008200 LTnewLM_18 AUGUSTUS mRNA 135319 135627 1 - . ID=LTnewLM_180008200.1;Parent=LTnewLM_180008200 LTnewLM_18 AUGUSTUS CDS 135319 135627 1 - 0 ID=LTnewLM_180008200.1:CDS:1;Parent=LTnewLM_180008200.1 ### LTnewLM_18 . polypeptide 135319 135627 . - . ID=LTnewLM_180008200.1:pep;Derives_from=LTnewLM_180008200.1;orthologous_to=LmjF.18.0310_mRNA;ortholog_cluster=OG0001604;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 136420 137202 1 - . ID=LTnewLM_180008300 LTnewLM_18 AUGUSTUS mRNA 136420 137202 1 - . ID=LTnewLM_180008300.1;Parent=LTnewLM_180008300 LTnewLM_18 AUGUSTUS CDS 136420 137202 1 - 0 ID=LTnewLM_180008300.1:CDS:1;Parent=LTnewLM_180008300.1 ### LTnewLM_18 . polypeptide 136420 137202 . - . ID=LTnewLM_180008300.1:pep;Derives_from=LTnewLM_180008300.1;orthologous_to=LmjF.18.0320_mRNA;ortholog_cluster=OG0001605;product=term%3DProbable Zinc-ribbon domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311 LTnewLM_18 Pfam protein_match 136564 136770 . - . Parent=LTnewLM_180008300.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_18 Pfam protein_match 136840 136974 . - . Parent=LTnewLM_180008300.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain ### LTnewLM_18 AUGUSTUS gene 138548 139282 1 - . ID=LTnewLM_180008400 LTnewLM_18 AUGUSTUS mRNA 138548 139282 1 - . ID=LTnewLM_180008400.1;Parent=LTnewLM_180008400 LTnewLM_18 AUGUSTUS CDS 138548 139282 1 - 0 ID=LTnewLM_180008400.1:CDS:1;Parent=LTnewLM_180008400.1 ### LTnewLM_18 . polypeptide 138548 139282 . - . ID=LTnewLM_180008400.1:pep;Derives_from=LTnewLM_180008400.1;orthologous_to=LmjF.18.0330_mRNA;ortholog_cluster=OG0001606;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_18 Pfam protein_match 138992 139138 . - . Parent=LTnewLM_180008400.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_18 AUGUSTUS gene 140898 142301 1 - . ID=LTnewLM_180008500 LTnewLM_18 AUGUSTUS mRNA 140898 142301 1 - . ID=LTnewLM_180008500.1;Parent=LTnewLM_180008500 LTnewLM_18 AUGUSTUS CDS 140898 142301 1 - 0 ID=LTnewLM_180008500.1:CDS:1;Parent=LTnewLM_180008500.1 ### LTnewLM_18 . polypeptide 140898 142301 . - . ID=LTnewLM_180008500.1:pep;Derives_from=LTnewLM_180008500.1;orthologous_to=LmjF.18.0340_mRNA;ortholog_cluster=OG0001607;product=term%3DProtein FAM221A/B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14753 LTnewLM_18 Pfam protein_match 141279 141605 . - . Parent=LTnewLM_180008500.1:pep;Name=PF14753;signature_desc=Protein FAM221A/B ### LTnewLM_18 AUGUSTUS gene 143409 144608 1 - . ID=LTnewLM_180008600 LTnewLM_18 AUGUSTUS mRNA 143409 144608 1 - . ID=LTnewLM_180008600.1;Parent=LTnewLM_180008600 LTnewLM_18 AUGUSTUS CDS 143409 144608 1 - 0 ID=LTnewLM_180008600.1:CDS:1;Parent=LTnewLM_180008600.1 ### LTnewLM_18 . polypeptide 143409 144608 . - . ID=LTnewLM_180008600.1:pep;Derives_from=LTnewLM_180008600.1;orthologous_to=LmjF.18.0350_mRNA;ortholog_cluster=OG0001608;product=term%3DATP12 chaperone protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07542;Ontology_term=GO:0043461 LTnewLM_18 Pfam protein_match 143823 144179 . - . Parent=LTnewLM_180008600.1:pep;Name=PF07542;signature_desc=ATP12 chaperone protein;Ontology_term=GO:0043461 ### LTnewLM_18 . polypeptide 145337 146029 . - . ID=LTnewLM_180008700.1:pep;Derives_from=LTnewLM_180008700.1;orthologous_to=LmjF.18.0360.1_mRNA;ortholog_cluster=OG0001609;product=term%3DPeptidase C13 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01650;Ontology_term=GO:0004197,GO:0006508 LTnewLM_18 Pfam protein_match 145604 146014 . - . Parent=LTnewLM_180008700.1:pep;Name=PF01650;signature_desc=Peptidase C13 family;Ontology_term=GO:0004197,GO:0006508 ### LTnewLM_18 . polypeptide 145337 146407 . - . ID=LTnewLM_180008700.2:pep;Derives_from=LTnewLM_180008700.2;orthologous_to=LmjF.18.0360.2_mRNA;ortholog_cluster=OG0001610;product=term%3DPeptidase C13 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01650;Ontology_term=GO:0004197,GO:0006508 LTnewLM_18 Pfam protein_match 145604 146248 . - . Parent=LTnewLM_180008700.2:pep;Name=PF01650;signature_desc=Peptidase C13 family;Ontology_term=GO:0004197,GO:0006508 ### LTnewLM_18 Liftoff gene 145337 146540 . - . ID=LTnewLM_180008700;coverage=0.998;sequence_ID=0.954;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.18.0360_0 LTnewLM_18 Liftoff mRNA 145337 146158 . - . ID=LTnewLM_180008700.1;Parent=LTnewLM_180008700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 145337 146029 . - 0 ID=LTnewLM_180008700.1:CDS:1;Parent=LTnewLM_180008700.1;extra_copy_number=0 LTnewLM_18 Liftoff five_prime_UTR 146030 146158 . - . ID=LTnewLM_180008700:five_prime_UTR;Parent=LTnewLM_180008700.1;extra_copy_number=0 LTnewLM_18 Liftoff mRNA 145337 146540 . - . ID=LTnewLM_180008700.2;Parent=LTnewLM_180008700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 145337 146407 . - 0 ID=LTnewLM_180008700.2:CDS:1;Parent=LTnewLM_180008700.2;extra_copy_number=0 LTnewLM_18 Liftoff five_prime_UTR 146408 146540 . - . ID=LTnewLM_180008700:five_prime_UTR.1;Parent=LTnewLM_180008700.2;extra_copy_number=0 ### LTnewLM_18 AUGUSTUS gene 148282 149676 1 - . ID=LTnewLM_180008800 LTnewLM_18 AUGUSTUS mRNA 148282 149676 1 - . ID=LTnewLM_180008800.1;Parent=LTnewLM_180008800 LTnewLM_18 AUGUSTUS CDS 148282 149676 1 - 0 ID=LTnewLM_180008800.1:CDS:1;Parent=LTnewLM_180008800.1 ### LTnewLM_18 . polypeptide 148282 149676 . - . ID=LTnewLM_180008800.1:pep;Derives_from=LTnewLM_180008800.1;orthologous_to=LmjF.18.0370_mRNA;ortholog_cluster=OG0001611;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_18 Pfam protein_match 148501 149499 . - . Parent=LTnewLM_180008800.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_18 AUGUSTUS gene 150428 154258 1 - . ID=LTnewLM_180008900 LTnewLM_18 AUGUSTUS mRNA 150428 154258 1 - . ID=LTnewLM_180008900.1;Parent=LTnewLM_180008900 LTnewLM_18 AUGUSTUS CDS 150428 154258 1 - 0 ID=LTnewLM_180008900.1:CDS:1;Parent=LTnewLM_180008900.1 ### LTnewLM_18 . polypeptide 150428 154258 . - . ID=LTnewLM_180008900.1:pep;Derives_from=LTnewLM_180008900.1;orthologous_to=LmjF.18.0380_mRNA;ortholog_cluster=OG0001612;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 Liftoff gene 156456 161738 . - . ID=LTnewLM_180009000;coverage=0.997;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0390_0 LTnewLM_18 Liftoff mRNA 156456 161738 . - . ID=LTnewLM_180009000.1;Parent=LTnewLM_180009000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 156456 161738 . - 0 ID=LTnewLM_180009000.1:CDS:1;Parent=LTnewLM_180009000.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 156456 161738 . - . ID=LTnewLM_180009000.1:pep;Derives_from=LTnewLM_180009000.1;orthologous_to=LmjF.18.0390_mRNA;ortholog_cluster=OG0001613;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . pseudogene 164299 165986 . - . ID=LTnewLM_180009100:pseudogene;coverage=0.999;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0400_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 164299 165986 . - . ID=LTnewLM_180009100.1;Parent=LTnewLM_180009100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 164299 165986 . - . ID=LTnewLM_180009100.1:pseudogenic_exon:1;Parent=LTnewLM_180009100.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 164299 165986 . - . ID=LTnewLM_180009100.1:pep;Derives_from=LTnewLM_180009100.1;orthologous_to=LmjF.18.0400_mRNA;ortholog_cluster=OG0007483;product=term%3DNucleotide-sugar transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04142;Ontology_term=GO:0008643,GO:0000139,GO:0005351,GO:0016021 LTnewLM_18 Pfam protein_match 165798 165962 . - . Parent=LTnewLM_180009100.1:pep;Name=PF04142;signature_desc=Nucleotide-sugar transporter;Ontology_term=GO:0005351,GO:0008643,GO:0000139,GO:0016021 ### LTnewLM_18 AUGUSTUS gene 168764 169366 1 - . ID=LTnewLM_180009200 LTnewLM_18 AUGUSTUS mRNA 168764 169366 1 - . ID=LTnewLM_180009200.1;Parent=LTnewLM_180009200 LTnewLM_18 AUGUSTUS CDS 168764 169366 1 - 0 ID=LTnewLM_180009200.1:CDS:1;Parent=LTnewLM_180009200.1 ### LTnewLM_18 . polypeptide 168764 169366 . - . ID=LTnewLM_180009200.1:pep;Derives_from=LTnewLM_180009200.1;orthologous_to=LmjF.18.0410_mRNA;ortholog_cluster=OG0001614;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 170813 171226 1 - . ID=LTnewLM_180009300 LTnewLM_18 AUGUSTUS mRNA 170813 171226 1 - . ID=LTnewLM_180009300.1;Parent=LTnewLM_180009300 LTnewLM_18 AUGUSTUS CDS 170813 171226 1 - 0 ID=LTnewLM_180009300.1:CDS:1;Parent=LTnewLM_180009300.1 ### LTnewLM_18 . polypeptide 170813 171226 . - . ID=LTnewLM_180009300.1:pep;Derives_from=LTnewLM_180009300.1;orthologous_to=LmjF.18.0420_mRNA;ortholog_cluster=OG0001615;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . pseudogene 175625 176293 1.08e+03 - . ID=LTnewLM_180009400:pseudogene;has_internal_stop=true;has_frameshift=false;has_stop=true;Target=LmjF.18.0430:mRNA 2 224;original_prot_length=224 LTnewLM_18 . pseudogenic_transcript 175625 176293 . - . ID=LTnewLM_180009400.1;Parent=LTnewLM_180009400:pseudogene LTnewLM_18 . pseudogenic_exon 175625 176293 . - . ID=LTnewLM_180009400.1:pseudogenic_exon:1;Parent=LTnewLM_180009400.1 ### LTnewLM_18 . polypeptide 175625 176293 . - . ID=LTnewLM_180009400.1:pep;Derives_from=LTnewLM_180009400.1;orthologous_to=LmjF.18.0430_mRNA;ortholog_cluster=OG0007484;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_18 Pfam protein_match 176159 176290 . - . Parent=LTnewLM_180009400.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_18 . pseudogene 177665 178936 . - . ID=LTnewLM_180009500:pseudogene;coverage=0.997;sequence_ID=0.887;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0440_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 177665 178936 . - . ID=LTnewLM_180009500.1;Parent=LTnewLM_180009500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 177665 178936 . - . ID=LTnewLM_180009500.1:pseudogenic_exon:1;Parent=LTnewLM_180009500.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 177665 178936 . - . ID=LTnewLM_180009500.1:pep;Derives_from=LTnewLM_180009500.1;orthologous_to=LmjF.18.0440_mRNA;ortholog_cluster=OG0007485;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_18 Pfam protein_match 177782 178180 . - . Parent=LTnewLM_180009500.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_18 AUGUSTUS gene 181114 182502 1 - . ID=LTnewLM_180009600 LTnewLM_18 AUGUSTUS mRNA 181114 182502 1 - . ID=LTnewLM_180009600.1;Parent=LTnewLM_180009600 LTnewLM_18 AUGUSTUS CDS 181114 182502 1 - 0 ID=LTnewLM_180009600.1:CDS:1;Parent=LTnewLM_180009600.1 ### LTnewLM_18 . polypeptide 181114 182502 . - . ID=LTnewLM_180009600.1:pep;Derives_from=LTnewLM_180009600.1;orthologous_to=LmjF.18.0450_mRNA;ortholog_cluster=OG0001616;product=term%3DSerine carboxypeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00450;Ontology_term=GO:0006508,GO:0004185 LTnewLM_18 Pfam protein_match 181135 182382 . - . Parent=LTnewLM_180009600.1:pep;Name=PF00450;signature_desc=Serine carboxypeptidase;Ontology_term=GO:0004185,GO:0006508 ### LTnewLM_18 AUGUSTUS gene 184397 185095 1 - . ID=LTnewLM_180009700 LTnewLM_18 AUGUSTUS mRNA 184397 185095 1 - . ID=LTnewLM_180009700.1;Parent=LTnewLM_180009700 LTnewLM_18 AUGUSTUS CDS 184397 185095 1 - 0 ID=LTnewLM_180009700.1:CDS:1;Parent=LTnewLM_180009700.1 ### LTnewLM_18 . polypeptide 184397 185095 . - . ID=LTnewLM_180009700.1:pep;Derives_from=LTnewLM_180009700.1;orthologous_to=LmjF.18.0460_mRNA;ortholog_cluster=OG0001617;product=term%3DUbiquitin-like domain/CAP-Gly domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14560|Pfam:PF01302;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 184433 184630 . - . Parent=LTnewLM_180009700.1:pep;Name=PF01302;signature_desc=CAP-Gly domain LTnewLM_18 Pfam protein_match 184838 185089 . - . Parent=LTnewLM_180009700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_18 AUGUSTUS gene 186153 188015 1 - . ID=LTnewLM_180009800 LTnewLM_18 AUGUSTUS mRNA 186153 188015 1 - . ID=LTnewLM_180009800.1;Parent=LTnewLM_180009800 LTnewLM_18 AUGUSTUS CDS 186153 188015 1 - 0 ID=LTnewLM_180009800.1:CDS:1;Parent=LTnewLM_180009800.1 ### LTnewLM_18 . polypeptide 186153 188015 . - . ID=LTnewLM_180009800.1:pep;Derives_from=LTnewLM_180009800.1;orthologous_to=LmjF.18.0470_mRNA;ortholog_cluster=OG0001618;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 186162 186263 . - . Parent=LTnewLM_180009800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 186540 186650 . - . Parent=LTnewLM_180009800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 186666 186776 . - . Parent=LTnewLM_180009800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 186792 186887 . - . Parent=LTnewLM_180009800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 186924 187022 . - . Parent=LTnewLM_180009800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_18 AUGUSTUS gene 188994 190172 1 - . ID=LTnewLM_180009900 LTnewLM_18 AUGUSTUS mRNA 188994 190172 1 - . ID=LTnewLM_180009900.1;Parent=LTnewLM_180009900 LTnewLM_18 AUGUSTUS CDS 188994 190172 1 - 0 ID=LTnewLM_180009900.1:CDS:1;Parent=LTnewLM_180009900.1 ### LTnewLM_18 . polypeptide 188994 190172 . - . ID=LTnewLM_180009900.1:pep;Derives_from=LTnewLM_180009900.1;orthologous_to=LmjF.18.0480_mRNA;ortholog_cluster=OG0001619;product=term%3DUracil DNA glycosylase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03167 LTnewLM_18 Pfam protein_match 189063 189530 . - . Parent=LTnewLM_180009900.1:pep;Name=PF03167;signature_desc=Uracil DNA glycosylase superfamily ### LTnewLM_18 AUGUSTUS gene 190745 191587 1 - . ID=LTnewLM_180010000 LTnewLM_18 AUGUSTUS mRNA 190745 191587 1 - . ID=LTnewLM_180010000.1;Parent=LTnewLM_180010000 LTnewLM_18 AUGUSTUS CDS 190745 191587 1 - 0 ID=LTnewLM_180010000.1:CDS:1;Parent=LTnewLM_180010000.1 ### LTnewLM_18 . polypeptide 190745 191587 . - . ID=LTnewLM_180010000.1:pep;Derives_from=LTnewLM_180010000.1;orthologous_to=LmjF.18.0490_mRNA;ortholog_cluster=OG0001620;product=term%3DBTB/POZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02214;Ontology_term=GO:0051260 LTnewLM_18 Pfam protein_match 191264 191518 . - . Parent=LTnewLM_180010000.1:pep;Name=PF02214;signature_desc=BTB/POZ domain;Ontology_term=GO:0051260 ### LTnewLM_18 AUGUSTUS gene 192470 193732 1 - . ID=LTnewLM_180010100 LTnewLM_18 AUGUSTUS mRNA 192470 193732 1 - . ID=LTnewLM_180010100.1;Parent=LTnewLM_180010100 LTnewLM_18 AUGUSTUS CDS 192470 193732 1 - 0 ID=LTnewLM_180010100.1:CDS:1;Parent=LTnewLM_180010100.1 ### LTnewLM_18 . polypeptide 192470 193732 . - . ID=LTnewLM_180010100.1:pep;Derives_from=LTnewLM_180010100.1;orthologous_to=LmjF.18.0500_mRNA;ortholog_cluster=OG0001621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 197566 200256 1 - . ID=LTnewLM_180010200 LTnewLM_18 AUGUSTUS mRNA 197566 200256 1 - . ID=LTnewLM_180010200.1;Parent=LTnewLM_180010200 LTnewLM_18 AUGUSTUS CDS 197566 200256 1 - 0 ID=LTnewLM_180010200.1:CDS:1;Parent=LTnewLM_180010200.1 ### LTnewLM_18 . polypeptide 197566 200256 . - . ID=LTnewLM_180010200.1:pep;Derives_from=LTnewLM_180010200.1;orthologous_to=LmjF.18.0510_mRNA;ortholog_cluster=OG0001622;product=term%3DAconitase family (aconitate hydratase)/Aconitase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00330|Pfam:PF00694;Ontology_term=GO:0008152 LTnewLM_18 Pfam protein_match 197779 198165 . - . Parent=LTnewLM_180010200.1:pep;Name=PF00694;signature_desc=Aconitase C-terminal domain;Ontology_term=GO:0008152 LTnewLM_18 Pfam protein_match 198538 200022 . - . Parent=LTnewLM_180010200.1:pep;Name=PF00330;signature_desc=Aconitase family (aconitate hydratase);Ontology_term=GO:0008152 ### LTnewLM_18 AUGUSTUS gene 202052 204289 1 - . ID=LTnewLM_180010300 LTnewLM_18 AUGUSTUS mRNA 202052 204289 1 - . ID=LTnewLM_180010300.1;Parent=LTnewLM_180010300 LTnewLM_18 AUGUSTUS CDS 202052 204289 1 - 0 ID=LTnewLM_180010300.1:CDS:1;Parent=LTnewLM_180010300.1 ### LTnewLM_18 . polypeptide 202052 204289 . - . ID=LTnewLM_180010300.1:pep;Derives_from=LTnewLM_180010300.1;orthologous_to=LmjF.18.0520_mRNA;ortholog_cluster=OG0001623;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 207359 208936 1 - . ID=LTnewLM_180010400 LTnewLM_18 AUGUSTUS mRNA 207359 208936 1 - . ID=LTnewLM_180010400.1;Parent=LTnewLM_180010400 LTnewLM_18 AUGUSTUS CDS 207359 208936 1 - 0 ID=LTnewLM_180010400.1:CDS:1;Parent=LTnewLM_180010400.1 ### LTnewLM_18 . polypeptide 207359 208936 . - . ID=LTnewLM_180010400.1:pep;Derives_from=LTnewLM_180010400.1;product=term%3DTubulin binding cofactor C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07986 LTnewLM_18 Pfam protein_match 208004 208357 . - . Parent=LTnewLM_180010400.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C ### LTnewLM_18 AUGUSTUS gene 212607 214148 1 - . ID=LTnewLM_180010500 LTnewLM_18 AUGUSTUS mRNA 212607 214148 1 - . ID=LTnewLM_180010500.1;Parent=LTnewLM_180010500 LTnewLM_18 AUGUSTUS CDS 212607 214148 1 - 0 ID=LTnewLM_180010500.1:CDS:1;Parent=LTnewLM_180010500.1 ### LTnewLM_18 . polypeptide 212607 214148 . - . ID=LTnewLM_180010500.1:pep;Derives_from=LTnewLM_180010500.1;orthologous_to=LmjF.18.0540_mRNA;ortholog_cluster=OG0001624;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 Liftoff gene 214809 216134 . - . ID=LTnewLM_180010600;coverage=0.997;sequence_ID=0.935;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.18.0550_0 LTnewLM_18 Liftoff mRNA 214809 216134 . - . ID=LTnewLM_180010600.1;Parent=LTnewLM_180010600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 214809 216134 . - 0 ID=LTnewLM_180010600.1:CDS:1;Parent=LTnewLM_180010600.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 214809 216134 . - . ID=LTnewLM_180010600.1:pep;Derives_from=LTnewLM_180010600.1;orthologous_to=LmjF.18.0550_mRNA;ortholog_cluster=OG0001625;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 216713 217951 1 - . ID=LTnewLM_180010700 LTnewLM_18 AUGUSTUS mRNA 216713 217951 1 - . ID=LTnewLM_180010700.1;Parent=LTnewLM_180010700 LTnewLM_18 AUGUSTUS CDS 216713 217951 1 - 0 ID=LTnewLM_180010700.1:CDS:1;Parent=LTnewLM_180010700.1 ### LTnewLM_18 . polypeptide 216713 217951 . - . ID=LTnewLM_180010700.1:pep;Derives_from=LTnewLM_180010700.1;orthologous_to=LmjF.18.0560_mRNA;ortholog_cluster=OG0001626;product=term%3DV-ATPase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03223;Ontology_term=GO:0033180,GO:0015991,GO:0015078 LTnewLM_18 Pfam protein_match 216791 217840 . - . Parent=LTnewLM_180010700.1:pep;Name=PF03223;signature_desc=V-ATPase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033180 ### LTnewLM_18 AUGUSTUS gene 219768 222965 1 + . ID=LTnewLM_180010800 LTnewLM_18 AUGUSTUS mRNA 219768 222965 1 + . ID=LTnewLM_180010800.1;Parent=LTnewLM_180010800 LTnewLM_18 AUGUSTUS CDS 219768 222965 1 + 0 ID=LTnewLM_180010800.1:CDS:1;Parent=LTnewLM_180010800.1 ### LTnewLM_18 . polypeptide 219768 222965 . + . ID=LTnewLM_180010800.1:pep;Derives_from=LTnewLM_180010800.1;orthologous_to=LmjF.18.0570_mRNA;ortholog_cluster=OG0001627;product=term%3DFlagellar-associated PapD-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14874 LTnewLM_18 Pfam protein_match 219945 220226 . + . Parent=LTnewLM_180010800.1:pep;Name=PF14874;signature_desc=Flagellar-associated PapD-like ### LTnewLM_18 AUGUSTUS gene 223878 224849 1 + . ID=LTnewLM_180010900 LTnewLM_18 AUGUSTUS mRNA 223878 224849 1 + . ID=LTnewLM_180010900.1;Parent=LTnewLM_180010900 LTnewLM_18 AUGUSTUS CDS 223878 224849 1 + 0 ID=LTnewLM_180010900.1:CDS:1;Parent=LTnewLM_180010900.1 ### LTnewLM_18 . polypeptide 223878 224849 . + . ID=LTnewLM_180010900.1:pep;Derives_from=LTnewLM_180010900.1;orthologous_to=LmjF.18.0580_mRNA;ortholog_cluster=OG0001628;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16113|Pfam:PF00378;Ontology_term=GO:0003824,GO:0008152 LTnewLM_18 Pfam protein_match 224013 224564 . + . Parent=LTnewLM_180010900.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_18 Pfam protein_match 224226 224798 . + . Parent=LTnewLM_180010900.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_18 AUGUSTUS gene 229461 230720 1 + . ID=LTnewLM_180011000 LTnewLM_18 AUGUSTUS mRNA 229461 230720 1 + . ID=LTnewLM_180011000.1;Parent=LTnewLM_180011000 LTnewLM_18 AUGUSTUS CDS 229461 230720 1 + 0 ID=LTnewLM_180011000.1:CDS:1;Parent=LTnewLM_180011000.1 ### LTnewLM_18 . polypeptide 229461 230720 . + . ID=LTnewLM_180011000.1:pep;Derives_from=LTnewLM_180011000.1;orthologous_to=LmjF.18.0590_mRNA;ortholog_cluster=OG0001629;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_18 Pfam protein_match 230010 230192 . + . Parent=LTnewLM_180011000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_18 . pseudogene 238153 238428 . + . ID=LTnewLM_180011100:pseudogene;coverage=0.996;sequence_ID=0.880;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0595_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 238153 238428 . + . ID=LTnewLM_180011100.1;Parent=LTnewLM_180011100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 238153 238428 . + . ID=LTnewLM_180011100.1:pseudogenic_exon:1;Parent=LTnewLM_180011100.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 238153 238428 . + . ID=LTnewLM_180011100.1:pep;Derives_from=LTnewLM_180011100.1;orthologous_to=LmjF.18.0595_mRNA;ortholog_cluster=OG0007486;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 240169 242052 1 + . ID=LTnewLM_180011200 LTnewLM_18 AUGUSTUS mRNA 240169 242052 1 + . ID=LTnewLM_180011200.1;Parent=LTnewLM_180011200 LTnewLM_18 AUGUSTUS CDS 240169 242052 1 + 0 ID=LTnewLM_180011200.1:CDS:1;Parent=LTnewLM_180011200.1 ### LTnewLM_18 . polypeptide 240169 242052 . + . ID=LTnewLM_180011200.1:pep;Derives_from=LTnewLM_180011200.1;orthologous_to=LmjF.18.0600_mRNA;ortholog_cluster=OG0001630;product=term%3DZn-finger in Ran binding protein and others/FYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00641|Pfam:PF01363;Ontology_term=GO:0008270,GO:0046872 LTnewLM_18 Pfam protein_match 240928 241005 . + . Parent=LTnewLM_180011200.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_18 Pfam protein_match 241657 241731 . + . Parent=LTnewLM_180011200.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_18 Pfam protein_match 241816 241995 . + . Parent=LTnewLM_180011200.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_18 AUGUSTUS gene 244088 244348 1 + . ID=LTnewLM_180011300 LTnewLM_18 AUGUSTUS mRNA 244088 244348 1 + . ID=LTnewLM_180011300.1;Parent=LTnewLM_180011300 LTnewLM_18 AUGUSTUS CDS 244088 244348 1 + 0 ID=LTnewLM_180011300.1:CDS:1;Parent=LTnewLM_180011300.1 ### LTnewLM_18 . polypeptide 244088 244348 . + . ID=LTnewLM_180011300.1:pep;Derives_from=LTnewLM_180011300.1;orthologous_to=LTnewLM_360048300.1,LmjF.36.3750_mRNA;ortholog_cluster=OG0000359;product=term%3DRibosomal protein S27%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01667;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_18 Pfam protein_match 244172 244333 . + . Parent=LTnewLM_180011300.1:pep;Name=PF01667;signature_desc=Ribosomal protein S27;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_18 AUGUSTUS gene 245585 246187 1 + . ID=LTnewLM_180011400 LTnewLM_18 AUGUSTUS mRNA 245585 246187 1 + . ID=LTnewLM_180011400.1;Parent=LTnewLM_180011400 LTnewLM_18 AUGUSTUS CDS 245585 246187 1 + 0 ID=LTnewLM_180011400.1:CDS:1;Parent=LTnewLM_180011400.1 ### LTnewLM_18 . polypeptide 245585 246187 . + . ID=LTnewLM_180011400.1:pep;Derives_from=LTnewLM_180011400.1;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_18 Pfam protein_match 245837 245956 . + . Parent=LTnewLM_180011400.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_18 AUGUSTUS gene 247469 249265 1 + . ID=LTnewLM_180011500 LTnewLM_18 AUGUSTUS mRNA 247469 249265 1 + . ID=LTnewLM_180011500.1;Parent=LTnewLM_180011500 LTnewLM_18 AUGUSTUS CDS 247469 249265 1 + 0 ID=LTnewLM_180011500.1:CDS:1;Parent=LTnewLM_180011500.1 ### LTnewLM_18 . polypeptide 247469 249265 . + . ID=LTnewLM_180011500.1:pep;Derives_from=LTnewLM_180011500.1;orthologous_to=LmjF.18.0610_mRNA;ortholog_cluster=OG0001631;product=term%3DATPase family associated with various cellular activities (AAA)/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF01434;Ontology_term=GO:0004222,GO:0006508,GO:0005524 LTnewLM_18 Pfam protein_match 247868 248263 . + . Parent=LTnewLM_180011500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_18 Pfam protein_match 248576 249118 . + . Parent=LTnewLM_180011500.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 ### LTnewLM_18 AUGUSTUS gene 250654 251298 1 + . ID=LTnewLM_180011600 LTnewLM_18 AUGUSTUS mRNA 250654 251298 1 + . ID=LTnewLM_180011600.1;Parent=LTnewLM_180011600 LTnewLM_18 AUGUSTUS CDS 250654 251298 1 + 0 ID=LTnewLM_180011600.1:CDS:1;Parent=LTnewLM_180011600.1 ### LTnewLM_18 . polypeptide 250654 251298 . + . ID=LTnewLM_180011600.1:pep;Derives_from=LTnewLM_180011600.1;orthologous_to=LTnewLM_360048400.1,LmjF.18.0620_mRNA,LmjF.36.3760_mRNA;ortholog_cluster=OG0000133;product=term%3DRibosomal protein L1p/L10e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00687 LTnewLM_18 Pfam protein_match 250714 251274 . + . Parent=LTnewLM_180011600.1:pep;Name=PF00687;signature_desc=Ribosomal protein L1p/L10e family ### LTnewLM_18 AUGUSTUS gene 253783 255471 1 + . ID=LTnewLM_180011700 LTnewLM_18 AUGUSTUS mRNA 253783 255471 1 + . ID=LTnewLM_180011700.1;Parent=LTnewLM_180011700 LTnewLM_18 AUGUSTUS CDS 253783 255471 1 + 0 ID=LTnewLM_180011700.1:CDS:1;Parent=LTnewLM_180011700.1 ### LTnewLM_18 . polypeptide 253783 255471 . + . ID=LTnewLM_180011700.1:pep;Derives_from=LTnewLM_180011700.1;orthologous_to=LmjF.18.0630_mRNA;ortholog_cluster=OG0001632;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 256179 256994 1 + . ID=LTnewLM_180011800 LTnewLM_18 AUGUSTUS mRNA 256179 256994 1 + . ID=LTnewLM_180011800.1;Parent=LTnewLM_180011800 LTnewLM_18 AUGUSTUS CDS 256179 256994 1 + 0 ID=LTnewLM_180011800.1:CDS:1;Parent=LTnewLM_180011800.1 ### LTnewLM_18 . polypeptide 256179 256994 . + . ID=LTnewLM_180011800.1:pep;Derives_from=LTnewLM_180011800.1;orthologous_to=LmjF.18.0640_mRNA;ortholog_cluster=OG0001633;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_18 Pfam protein_match 256206 256955 . + . Parent=LTnewLM_180011800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_18 Pfam protein_match 256209 256943 . + . Parent=LTnewLM_180011800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_18 Pfam protein_match 256506 256919 . + . Parent=LTnewLM_180011800.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_18 AUGUSTUS gene 261126 265049 1 + . ID=LTnewLM_180011900 LTnewLM_18 AUGUSTUS mRNA 261126 265049 1 + . ID=LTnewLM_180011900.1;Parent=LTnewLM_180011900 LTnewLM_18 AUGUSTUS CDS 261126 265049 1 + 0 ID=LTnewLM_180011900.1:CDS:1;Parent=LTnewLM_180011900.1 ### LTnewLM_18 . polypeptide 261126 265049 . + . ID=LTnewLM_180011900.1:pep;Derives_from=LTnewLM_180011900.1;orthologous_to=LmjF.18.0650_mRNA;ortholog_cluster=OG0001634;product=term%3DPA26 p53-induced protein (sestrin)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04636;Ontology_term=GO:1901031,GO:0005634 LTnewLM_18 Pfam protein_match 263304 263525 . + . Parent=LTnewLM_180011900.1:pep;Name=PF04636;signature_desc=PA26 p53-induced protein (sestrin);Ontology_term=GO:1901031,GO:0005634 LTnewLM_18 Pfam protein_match 264339 264677 . + . Parent=LTnewLM_180011900.1:pep;Name=PF04636;signature_desc=PA26 p53-induced protein (sestrin);Ontology_term=GO:1901031,GO:0005634 ### LTnewLM_18 AUGUSTUS gene 268550 270685 1 + . ID=LTnewLM_180012000 LTnewLM_18 AUGUSTUS mRNA 268550 270685 1 + . ID=LTnewLM_180012000.1;Parent=LTnewLM_180012000 LTnewLM_18 AUGUSTUS CDS 268550 270685 1 + 0 ID=LTnewLM_180012000.1:CDS:1;Parent=LTnewLM_180012000.1 ### LTnewLM_18 . polypeptide 268550 270685 . + . ID=LTnewLM_180012000.1:pep;Derives_from=LTnewLM_180012000.1;orthologous_to=LmjF.18.0700_mRNA;ortholog_cluster=OG0001635;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 273133 275637 1 + . ID=LTnewLM_180012100 LTnewLM_18 AUGUSTUS mRNA 273133 275637 1 + . ID=LTnewLM_180012100.1;Parent=LTnewLM_180012100 LTnewLM_18 AUGUSTUS CDS 273133 275637 1 + 0 ID=LTnewLM_180012100.1:CDS:1;Parent=LTnewLM_180012100.1 ### LTnewLM_18 . polypeptide 273133 275637 . + . ID=LTnewLM_180012100.1:pep;Derives_from=LTnewLM_180012100.1;orthologous_to=LmjF.18.0690_mRNA;ortholog_cluster=OG0001636;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 276727 278139 1 + . ID=LTnewLM_180012200 LTnewLM_18 AUGUSTUS mRNA 276727 278139 1 + . ID=LTnewLM_180012200.1;Parent=LTnewLM_180012200 LTnewLM_18 AUGUSTUS CDS 276727 278139 1 + 0 ID=LTnewLM_180012200.1:CDS:1;Parent=LTnewLM_180012200.1 ### LTnewLM_18 . polypeptide 276727 278139 . + . ID=LTnewLM_180012200.1:pep;Derives_from=LTnewLM_180012200.1;orthologous_to=LTnewLM_180012300.1,LmjF.18.0670_mRNA,LmjF.18.0680_mRNA;ortholog_cluster=OG0000134;product=term%3DCitrate synthase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00285;Ontology_term=GO:0044262,GO:0046912 LTnewLM_18 Pfam protein_match 276913 278085 . + . Parent=LTnewLM_180012200.1:pep;Name=PF00285;signature_desc=Citrate synthase%2C C-terminal domain;Ontology_term=GO:0046912,GO:0044262 ### LTnewLM_18 . pseudogene 282730 284139 2.5e+03 + . ID=LTnewLM_180012300:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.18.0680:mRNA 2 471;original_prot_length=471 LTnewLM_18 . pseudogenic_transcript 282730 284139 . + . ID=LTnewLM_180012300.1;Parent=LTnewLM_180012300:pseudogene LTnewLM_18 . pseudogenic_exon 282730 284139 . + . ID=LTnewLM_180012300.1:pseudogenic_exon:1;Parent=LTnewLM_180012300.1 ### LTnewLM_18 . polypeptide 282730 284139 . + . ID=LTnewLM_180012300.1:pep;Derives_from=LTnewLM_180012300.1;orthologous_to=LTnewLM_180012200.1,LmjF.18.0670_mRNA,LmjF.18.0680_mRNA;ortholog_cluster=OG0000134;product=term%3DCitrate synthase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00285;Ontology_term=GO:0044262,GO:0046912 LTnewLM_18 Pfam protein_match 282913 284085 . + . Parent=LTnewLM_180012300.1:pep;Name=PF00285;signature_desc=Citrate synthase%2C C-terminal domain;Ontology_term=GO:0046912,GO:0044262 ### LTnewLM_18 . pseudogene 289575 294626 8.18e+03 + . ID=LTnewLM_180012400:pseudogene;has_internal_stop=false;has_frameshift=false;has_start=true;Target=LmjF.18.0710:mRNA 1 1689;original_prot_length=1690 LTnewLM_18 . pseudogenic_transcript 289575 294626 . + . ID=LTnewLM_180012400.1;Parent=LTnewLM_180012400:pseudogene LTnewLM_18 . pseudogenic_exon 289575 294626 . + . ID=LTnewLM_180012400.1:pseudogenic_exon:1;Parent=LTnewLM_180012400.1 ### LTnewLM_18 . polypeptide 289575 294626 . + . ID=LTnewLM_180012400.1:pep;Derives_from=LTnewLM_180012400.1;orthologous_to=LmjF.18.0710_mRNA;ortholog_cluster=OG0007487;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 307848 311150 1 + . ID=LTnewLM_180012500 LTnewLM_18 AUGUSTUS mRNA 307848 311150 1 + . ID=LTnewLM_180012500.1;Parent=LTnewLM_180012500 LTnewLM_18 AUGUSTUS CDS 307848 311150 1 + 0 ID=LTnewLM_180012500.1:CDS:1;Parent=LTnewLM_180012500.1 ### LTnewLM_18 . polypeptide 307848 311150 . + . ID=LTnewLM_180012500.1:pep;Derives_from=LTnewLM_180012500.1;orthologous_to=LmjF.18.0720_mRNA;ortholog_cluster=OG0001637;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 311880 312632 1 + . ID=LTnewLM_180012600 LTnewLM_18 AUGUSTUS mRNA 311880 312632 1 + . ID=LTnewLM_180012600.1;Parent=LTnewLM_180012600 LTnewLM_18 AUGUSTUS CDS 311880 312632 1 + 0 ID=LTnewLM_180012600.1:CDS:1;Parent=LTnewLM_180012600.1 ### LTnewLM_18 . polypeptide 311880 312632 . + . ID=LTnewLM_180012600.1:pep;Derives_from=LTnewLM_180012600.1;orthologous_to=LmjF.18.0730_mRNA;ortholog_cluster=OG0001638;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_18 Pfam protein_match 312381 312614 . + . Parent=LTnewLM_180012600.1:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_18 AUGUSTUS gene 313680 315080 1 + . ID=LTnewLM_180012700 LTnewLM_18 AUGUSTUS mRNA 313680 315080 1 + . ID=LTnewLM_180012700.1;Parent=LTnewLM_180012700 LTnewLM_18 AUGUSTUS CDS 313680 315080 1 + 0 ID=LTnewLM_180012700.1:CDS:1;Parent=LTnewLM_180012700.1 ### LTnewLM_18 . polypeptide 313680 315080 . + . ID=LTnewLM_180012700.1:pep;Derives_from=LTnewLM_180012700.1;orthologous_to=LmjF.18.0740_mRNA;ortholog_cluster=OG0001639;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_18 Pfam protein_match 313740 314309 . + . Parent=LTnewLM_180012700.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_18 Pfam protein_match 314391 314594 . + . Parent=LTnewLM_180012700.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_18 Pfam protein_match 314640 314996 . + . Parent=LTnewLM_180012700.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 ### LTnewLM_18 AUGUSTUS gene 316555 318255 1 + . ID=LTnewLM_180012800 LTnewLM_18 AUGUSTUS mRNA 316555 318255 1 + . ID=LTnewLM_180012800.1;Parent=LTnewLM_180012800 LTnewLM_18 AUGUSTUS CDS 316555 318255 1 + 0 ID=LTnewLM_180012800.1:CDS:1;Parent=LTnewLM_180012800.1 ### LTnewLM_18 . polypeptide 316555 318255 . + . ID=LTnewLM_180012800.1:pep;Derives_from=LTnewLM_180012800.1;orthologous_to=LmjF.18.0750_mRNA;ortholog_cluster=OG0001640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 319084 319374 1 + . ID=LTnewLM_180012900 LTnewLM_18 AUGUSTUS mRNA 319084 319374 1 + . ID=LTnewLM_180012900.1;Parent=LTnewLM_180012900 LTnewLM_18 AUGUSTUS CDS 319084 319374 1 + 0 ID=LTnewLM_180012900.1:CDS:1;Parent=LTnewLM_180012900.1 ### LTnewLM_18 . polypeptide 319084 319374 . + . ID=LTnewLM_180012900.1:pep;Derives_from=LTnewLM_180012900.1;orthologous_to=LmjF.18.0760_mRNA;ortholog_cluster=OG0001641;product=term%3DZinc-finger of C2H2 type/Zinc-finger double-stranded RNA-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12874|Pfam:PF12171 LTnewLM_18 Pfam protein_match 319138 319209 . + . Parent=LTnewLM_180012900.1:pep;Name=PF12874;signature_desc=Zinc-finger of C2H2 type LTnewLM_18 Pfam protein_match 319138 319212 . + . Parent=LTnewLM_180012900.1:pep;Name=PF12171;signature_desc=Zinc-finger double-stranded RNA-binding ### LTnewLM_18 . pseudogene 320585 325621 . + . ID=LTnewLM_180013000:pseudogene;coverage=0.990;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0770_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 320585 325621 . + . ID=LTnewLM_180013000.1;Parent=LTnewLM_180013000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 320585 325621 . + . ID=LTnewLM_180013000.1:pseudogenic_exon:1;Parent=LTnewLM_180013000.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 320585 325621 . + . ID=LTnewLM_180013000.1:pep;Derives_from=LTnewLM_180013000.1;orthologous_to=LmjF.18.0770_mRNA;ortholog_cluster=OG0007488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 326716 327435 1 + . ID=LTnewLM_180013100 LTnewLM_18 AUGUSTUS mRNA 326716 327435 1 + . ID=LTnewLM_180013100.1;Parent=LTnewLM_180013100 LTnewLM_18 AUGUSTUS CDS 326716 327435 1 + 0 ID=LTnewLM_180013100.1:CDS:1;Parent=LTnewLM_180013100.1 ### LTnewLM_18 . polypeptide 326716 327435 . + . ID=LTnewLM_180013100.1:pep;Derives_from=LTnewLM_180013100.1;orthologous_to=LmjF.18.0780_mRNA;ortholog_cluster=OG0001642;product=term%3DRNA polymerase Rpb5%2C N-terminal domain/RNA polymerase Rpb5%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03871|Pfam:PF01191;Ontology_term=GO:0006351,GO:0003899,GO:0005634,GO:0003677 LTnewLM_18 Pfam protein_match 326740 327066 . + . Parent=LTnewLM_180013100.1:pep;Name=PF03871;signature_desc=RNA polymerase Rpb5%2C N-terminal domain;Ontology_term=GO:0003677,GO:0003899,GO:0006351,GO:0005634 LTnewLM_18 Pfam protein_match 327211 327426 . + . Parent=LTnewLM_180013100.1:pep;Name=PF01191;signature_desc=RNA polymerase Rpb5%2C C-terminal domain;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_18 AUGUSTUS gene 328098 329126 1 + . ID=LTnewLM_180013200 LTnewLM_18 AUGUSTUS mRNA 328098 329126 1 + . ID=LTnewLM_180013200.1;Parent=LTnewLM_180013200 LTnewLM_18 AUGUSTUS CDS 328098 329126 1 + 0 ID=LTnewLM_180013200.1:CDS:1;Parent=LTnewLM_180013200.1 ### LTnewLM_18 . polypeptide 328098 329126 . + . ID=LTnewLM_180013200.1:pep;Derives_from=LTnewLM_180013200.1;orthologous_to=LmjF.18.0790_mRNA;ortholog_cluster=OG0001643;product=term%3DRNA polymerase Rpb5%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01191;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_18 Pfam protein_match 328902 329117 . + . Parent=LTnewLM_180013200.1:pep;Name=PF01191;signature_desc=RNA polymerase Rpb5%2C C-terminal domain;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_18 AUGUSTUS gene 329940 330860 1 + . ID=LTnewLM_180013300 LTnewLM_18 AUGUSTUS mRNA 329940 330860 1 + . ID=LTnewLM_180013300.1;Parent=LTnewLM_180013300 LTnewLM_18 AUGUSTUS CDS 329940 330860 1 + 0 ID=LTnewLM_180013300.1:CDS:1;Parent=LTnewLM_180013300.1 ### LTnewLM_18 . polypeptide 329940 330860 . + . ID=LTnewLM_180013300.1:pep;Derives_from=LTnewLM_180013300.1;orthologous_to=LmjF.18.0800_mRNA;ortholog_cluster=OG0001644;product=term%3DRibosomal protein S8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00410;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_18 Pfam protein_match 330462 330839 . + . Parent=LTnewLM_180013300.1:pep;Name=PF00410;signature_desc=Ribosomal protein S8;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_18 Liftoff gene 332305 333552 . + . ID=LTnewLM_180013400;coverage=0.999;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0810_0 LTnewLM_18 Liftoff mRNA 332305 333552 . + . ID=LTnewLM_180013400.1;Parent=LTnewLM_180013400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 332305 333552 . + 0 ID=LTnewLM_180013400.1:CDS:1;Parent=LTnewLM_180013400.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 332305 333552 . + . ID=LTnewLM_180013400.1:pep;Derives_from=LTnewLM_180013400.1;orthologous_to=LmjF.18.0810_mRNA;ortholog_cluster=OG0001645;product=term%3DCDP-alcohol phosphatidyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01066;Ontology_term=GO:0008654,GO:0016020,GO:0016780 LTnewLM_18 Pfam protein_match 332680 332937 . + . Parent=LTnewLM_180013400.1:pep;Name=PF01066;signature_desc=CDP-alcohol phosphatidyltransferase;Ontology_term=GO:0016780,GO:0008654,GO:0016020 ### LTnewLM_18 AUGUSTUS gene 334894 342879 1 + . ID=LTnewLM_180013500 LTnewLM_18 AUGUSTUS mRNA 334894 342879 1 + . ID=LTnewLM_180013500.1;Parent=LTnewLM_180013500 LTnewLM_18 AUGUSTUS CDS 334894 342879 1 + 0 ID=LTnewLM_180013500.1:CDS:1;Parent=LTnewLM_180013500.1 ### LTnewLM_18 . polypeptide 334894 342879 . + . ID=LTnewLM_180013500.1:pep;Derives_from=LTnewLM_180013500.1;orthologous_to=LmjF.18.0820_mRNA;ortholog_cluster=OG0001646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 343518 346346 1 + . ID=LTnewLM_180013600 LTnewLM_18 AUGUSTUS mRNA 343518 346346 1 + . ID=LTnewLM_180013600.1;Parent=LTnewLM_180013600 LTnewLM_18 AUGUSTUS CDS 343518 346346 1 + 0 ID=LTnewLM_180013600.1:CDS:1;Parent=LTnewLM_180013600.1 ### LTnewLM_18 . polypeptide 343518 346346 . + . ID=LTnewLM_180013600.1:pep;Derives_from=LTnewLM_180013600.1;orthologous_to=LmjF.18.0830_mRNA;ortholog_cluster=OG0001647;product=term%3DWD domain%2C G-beta repeat/Dip2/Utp12 Family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF04003;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 345093 345197 . + . Parent=LTnewLM_180013600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 345972 346283 . + . Parent=LTnewLM_180013600.1:pep;Name=PF04003;signature_desc=Dip2/Utp12 Family ### LTnewLM_18 AUGUSTUS gene 347755 353883 1 + . ID=LTnewLM_180013700 LTnewLM_18 AUGUSTUS mRNA 347755 353883 1 + . ID=LTnewLM_180013700.1;Parent=LTnewLM_180013700 LTnewLM_18 AUGUSTUS CDS 347755 353883 1 + 0 ID=LTnewLM_180013700.1:CDS:1;Parent=LTnewLM_180013700.1 ### LTnewLM_18 . polypeptide 347755 353883 . + . ID=LTnewLM_180013700.1:pep;Derives_from=LTnewLM_180013700.1;orthologous_to=LmjF.18.0840_mRNA;ortholog_cluster=OG0001648;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . polypeptide 355420 358000 . + . ID=LTnewLM_180013800.1:pep;Derives_from=LTnewLM_180013800.1;orthologous_to=LTnewLM_180013800.2,LmjF.18.0850_mRNA;ortholog_cluster=OG0000360;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 355420 364038 1.38 + . ID=LTnewLM_180013800 LTnewLM_18 AUGUSTUS mRNA 355420 358000 0.38 + . ID=LTnewLM_180013800.1;Parent=LTnewLM_180013800 LTnewLM_18 AUGUSTUS CDS 355420 357918 0.38 + 0 ID=LTnewLM_180013800.1:CDS:1;Parent=LTnewLM_180013800.1 LTnewLM_18 AUGUSTUS CDS 357995 358000 0.74 + 0 ID=LTnewLM_180013800.1:CDS:2;Parent=LTnewLM_180013800.1 LTnewLM_18 AUGUSTUS mRNA 355420 364038 1 + . ID=LTnewLM_180013800.2;Parent=LTnewLM_180013800 LTnewLM_18 AUGUSTUS CDS 355420 364038 1 + 0 ID=LTnewLM_180013800.2:CDS:1;Parent=LTnewLM_180013800.2 ### LTnewLM_18 . polypeptide 355420 364038 . + . ID=LTnewLM_180013800.2:pep;Derives_from=LTnewLM_180013800.2;orthologous_to=LTnewLM_180013800.1,LmjF.18.0850_mRNA;ortholog_cluster=OG0000360;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . pseudogene 365525 368214 4.48e+03 + . ID=LTnewLM_180013900:pseudogene;has_internal_stop=false;has_frameshift=true;has_stop=true;Target=LmjF.18.0860:mRNA 2 924;original_prot_length=924 LTnewLM_18 . pseudogenic_transcript 365525 368214 . + . ID=LTnewLM_180013900.1;Parent=LTnewLM_180013900:pseudogene LTnewLM_18 . pseudogenic_exon 365525 367501 . + . ID=LTnewLM_180013900.1:pseudogenic_exon:1;Parent=LTnewLM_180013900.1 LTnewLM_18 . pseudogenic_exon 367507 368214 . + . ID=LTnewLM_180013900.1:pseudogenic_exon:2;Parent=LTnewLM_180013900.1 ### LTnewLM_18 . polypeptide 365525 368214 . + . ID=LTnewLM_180013900.1:pep;Derives_from=LTnewLM_180013900.1;orthologous_to=LmjF.18.0860_mRNA;ortholog_cluster=OG0007489;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 Aragorn_1.2.36 gene 367920 368016 . + . ID=LTnewLM_180014000 LTnewLM_18 Aragorn_1.2.36 tRNA 367920 368016 . + . ID=LTnewLM_180014000:tRNA;Parent=LTnewLM_180014000;aa=Arg;anticodon=tct;gc_content=69.1 ### LTnewLM_18 AUGUSTUS gene 368919 370526 1 + . ID=LTnewLM_180014100 LTnewLM_18 AUGUSTUS mRNA 368919 370526 1 + . ID=LTnewLM_180014100.1;Parent=LTnewLM_180014100 LTnewLM_18 AUGUSTUS CDS 368919 370526 1 + 0 ID=LTnewLM_180014100.1:CDS:1;Parent=LTnewLM_180014100.1 ### LTnewLM_18 . polypeptide 368919 370526 . + . ID=LTnewLM_180014100.1:pep;Derives_from=LTnewLM_180014100.1;orthologous_to=LmjF.18.0870_mRNA;ortholog_cluster=OG0001649;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . polypeptide 371823 372265 . + . ID=LTnewLM_180014200.1:pep;Derives_from=LTnewLM_180014200.1;orthologous_to=LTnewLM_180014200.2,LmjF.18.0880_mRNA;ortholog_cluster=OG0000361;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 371823 375329 1.35 + . ID=LTnewLM_180014200 LTnewLM_18 AUGUSTUS mRNA 371823 372265 0.35 + . ID=LTnewLM_180014200.1;Parent=LTnewLM_180014200 LTnewLM_18 AUGUSTUS CDS 371823 372151 0.52 + 0 ID=LTnewLM_180014200.1:CDS:1;Parent=LTnewLM_180014200.1 LTnewLM_18 AUGUSTUS CDS 372211 372265 0.41 + 1 ID=LTnewLM_180014200.1:CDS:2;Parent=LTnewLM_180014200.1 LTnewLM_18 AUGUSTUS mRNA 371823 375329 1 + . ID=LTnewLM_180014200.2;Parent=LTnewLM_180014200 LTnewLM_18 AUGUSTUS CDS 371823 375329 1 + 0 ID=LTnewLM_180014200.2:CDS:1;Parent=LTnewLM_180014200.2 ### LTnewLM_18 . polypeptide 371823 375329 . + . ID=LTnewLM_180014200.2:pep;Derives_from=LTnewLM_180014200.2;orthologous_to=LTnewLM_180014200.1,LmjF.18.0880_mRNA;ortholog_cluster=OG0000361;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_18 Pfam protein_match 374835 375311 . + . Parent=LTnewLM_180014200.2:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_18 AUGUSTUS gene 375875 376546 1 + . ID=LTnewLM_180014300 LTnewLM_18 AUGUSTUS mRNA 375875 376546 1 + . ID=LTnewLM_180014300.1;Parent=LTnewLM_180014300 LTnewLM_18 AUGUSTUS CDS 375875 376546 1 + 0 ID=LTnewLM_180014300.1:CDS:1;Parent=LTnewLM_180014300.1 ### LTnewLM_18 . polypeptide 375875 376546 . + . ID=LTnewLM_180014300.1:pep;Derives_from=LTnewLM_180014300.1;orthologous_to=LmjF.18.0890_mRNA;ortholog_cluster=OG0001650;product=term%3DADP-ribosylation factor family/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family/Gtr1/RagA G protein conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071|Pfam:PF04670;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_18 Pfam protein_match 375884 376261 . + . Parent=LTnewLM_180014300.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_18 Pfam protein_match 375899 376183 . + . Parent=LTnewLM_180014300.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_18 Pfam protein_match 375899 376237 . + . Parent=LTnewLM_180014300.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_18 Pfam protein_match 375899 376432 . + . Parent=LTnewLM_180014300.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_18 Pfam protein_match 375899 376432 . + . Parent=LTnewLM_180014300.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 ### LTnewLM_18 AUGUSTUS gene 378883 381504 1 + . ID=LTnewLM_180014400 LTnewLM_18 AUGUSTUS mRNA 378883 381504 1 + . ID=LTnewLM_180014400.1;Parent=LTnewLM_180014400 LTnewLM_18 AUGUSTUS CDS 378883 381504 1 + 0 ID=LTnewLM_180014400.1:CDS:1;Parent=LTnewLM_180014400.1 ### LTnewLM_18 . polypeptide 378883 381504 . + . ID=LTnewLM_180014400.1:pep;Derives_from=LTnewLM_180014400.1;orthologous_to=LmjF.18.0900_mRNA;ortholog_cluster=OG0001651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 382557 385874 1 + . ID=LTnewLM_180014500 LTnewLM_18 AUGUSTUS mRNA 382557 385874 1 + . ID=LTnewLM_180014500.1;Parent=LTnewLM_180014500 LTnewLM_18 AUGUSTUS CDS 382557 385874 1 + 0 ID=LTnewLM_180014500.1:CDS:1;Parent=LTnewLM_180014500.1 ### LTnewLM_18 . polypeptide 382557 385874 . + . ID=LTnewLM_180014500.1:pep;Derives_from=LTnewLM_180014500.1;orthologous_to=LmjF.18.0910_mRNA;ortholog_cluster=OG0001652;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 386608 388458 1 + . ID=LTnewLM_180014600 LTnewLM_18 AUGUSTUS mRNA 386608 388458 1 + . ID=LTnewLM_180014600.1;Parent=LTnewLM_180014600 LTnewLM_18 AUGUSTUS CDS 386608 388458 1 + 0 ID=LTnewLM_180014600.1:CDS:1;Parent=LTnewLM_180014600.1 ### LTnewLM_18 . polypeptide 386608 388458 . + . ID=LTnewLM_180014600.1:pep;Derives_from=LTnewLM_180014600.1;orthologous_to=LmjF.18.0920_mRNA;ortholog_cluster=OG0001653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 388969 391665 1 + . ID=LTnewLM_180014700 LTnewLM_18 AUGUSTUS mRNA 388969 391665 1 + . ID=LTnewLM_180014700.1;Parent=LTnewLM_180014700 LTnewLM_18 AUGUSTUS CDS 388969 391665 1 + 0 ID=LTnewLM_180014700.1:CDS:1;Parent=LTnewLM_180014700.1 ### LTnewLM_18 . polypeptide 388969 391665 . + . ID=LTnewLM_180014700.1:pep;Derives_from=LTnewLM_180014700.1;orthologous_to=LmjF.18.0930_mRNA;ortholog_cluster=OG0001654;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 392472 396305 1 + . ID=LTnewLM_180014800 LTnewLM_18 AUGUSTUS mRNA 392472 396305 1 + . ID=LTnewLM_180014800.1;Parent=LTnewLM_180014800 LTnewLM_18 AUGUSTUS CDS 392472 396305 1 + 0 ID=LTnewLM_180014800.1:CDS:1;Parent=LTnewLM_180014800.1 ### LTnewLM_18 . polypeptide 392472 396305 . + . ID=LTnewLM_180014800.1:pep;Derives_from=LTnewLM_180014800.1;orthologous_to=LmjF.18.0940_mRNA;ortholog_cluster=OG0001655;product=term%3DNrap protein domain 3/Nrap protein nucleotidyltransferase domain 4/Nrap protein PAP/OAS1-like domain 5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17404|Pfam:PF17405|Pfam:PF17406 LTnewLM_18 Pfam protein_match 393765 394238 . + . Parent=LTnewLM_180014800.1:pep;Name=PF17404;signature_desc=Nrap protein domain 3 LTnewLM_18 Pfam protein_match 394350 394931 . + . Parent=LTnewLM_180014800.1:pep;Name=PF17405;signature_desc=Nrap protein nucleotidyltransferase domain 4 LTnewLM_18 Pfam protein_match 394959 395369 . + . Parent=LTnewLM_180014800.1:pep;Name=PF17406;signature_desc=Nrap protein PAP/OAS1-like domain 5 ### LTnewLM_18 Liftoff gene 397374 398441 . + . ID=LTnewLM_180014900;coverage=0.975;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.0950_0 LTnewLM_18 Liftoff mRNA 397374 398441 . + . ID=LTnewLM_180014900.1;Parent=LTnewLM_180014900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 397374 398441 . + 0 ID=LTnewLM_180014900.1:CDS:1;Parent=LTnewLM_180014900.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 397374 398441 . + . ID=LTnewLM_180014900.1:pep;Derives_from=LTnewLM_180014900.1;orthologous_to=LmjF.18.0950_mRNA;ortholog_cluster=OG0001656;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 398975 401089 1 + . ID=LTnewLM_180015000 LTnewLM_18 AUGUSTUS mRNA 398975 401089 1 + . ID=LTnewLM_180015000.1;Parent=LTnewLM_180015000 LTnewLM_18 AUGUSTUS CDS 398975 401089 1 + 0 ID=LTnewLM_180015000.1:CDS:1;Parent=LTnewLM_180015000.1 ### LTnewLM_18 . polypeptide 398975 401089 . + . ID=LTnewLM_180015000.1:pep;Derives_from=LTnewLM_180015000.1;orthologous_to=LmjF.18.0960_mRNA;ortholog_cluster=OG0001657;product=term%3DMannosyltransferase (PIG-V)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04188;Ontology_term=GO:0016758,GO:0006506 LTnewLM_18 Pfam protein_match 399296 399547 . + . Parent=LTnewLM_180015000.1:pep;Name=PF04188;signature_desc=Mannosyltransferase (PIG-V);Ontology_term=GO:0016758,GO:0006506 LTnewLM_18 Pfam protein_match 400490 401083 . + . Parent=LTnewLM_180015000.1:pep;Name=PF04188;signature_desc=Mannosyltransferase (PIG-V);Ontology_term=GO:0016758,GO:0006506 ### LTnewLM_18 AUGUSTUS gene 402485 408651 0.69 + . ID=LTnewLM_180015100 LTnewLM_18 AUGUSTUS mRNA 402485 408651 0.27 + . ID=LTnewLM_180015100.1;Parent=LTnewLM_180015100 LTnewLM_18 AUGUSTUS CDS 402485 403111 0.36 + 0 ID=LTnewLM_180015100.1:CDS:1;Parent=LTnewLM_180015100.1 LTnewLM_18 AUGUSTUS CDS 403246 408651 0.7 + 0 ID=LTnewLM_180015100.1:CDS:2;Parent=LTnewLM_180015100.1 LTnewLM_18 AUGUSTUS mRNA 403375 405191 0.42 + . ID=LTnewLM_180015100.2;Parent=LTnewLM_180015100 LTnewLM_18 AUGUSTUS CDS 403375 405065 0.54 + 0 ID=LTnewLM_180015100.2:CDS:1;Parent=LTnewLM_180015100.2 LTnewLM_18 AUGUSTUS CDS 405119 405191 0.58 + 1 ID=LTnewLM_180015100.2:CDS:2;Parent=LTnewLM_180015100.2 ### LTnewLM_18 . polypeptide 402485 408651 . + . ID=LTnewLM_180015100.1:pep;Derives_from=LTnewLM_180015100.1;orthologous_to=LTnewLM_180015100.2,LmjF.18.0970_mRNA;ortholog_cluster=OG0000362;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . polypeptide 403375 405191 . + . ID=LTnewLM_180015100.2:pep;Derives_from=LTnewLM_180015100.2;orthologous_to=LTnewLM_180015100.1,LmjF.18.0970_mRNA;ortholog_cluster=OG0000362;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 409648 410223 1 + . ID=LTnewLM_180015200 LTnewLM_18 AUGUSTUS mRNA 409648 410223 1 + . ID=LTnewLM_180015200.1;Parent=LTnewLM_180015200 LTnewLM_18 AUGUSTUS CDS 409648 410223 1 + 0 ID=LTnewLM_180015200.1:CDS:1;Parent=LTnewLM_180015200.1 ### LTnewLM_18 . polypeptide 409648 410223 . + . ID=LTnewLM_180015200.1:pep;Derives_from=LTnewLM_180015200.1;orthologous_to=LmjF.18.0980_mRNA;ortholog_cluster=OG0001658;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 411712 413196 1 + . ID=LTnewLM_180015300 LTnewLM_18 AUGUSTUS mRNA 411712 413196 1 + . ID=LTnewLM_180015300.1;Parent=LTnewLM_180015300 LTnewLM_18 AUGUSTUS CDS 411712 413196 1 + 0 ID=LTnewLM_180015300.1:CDS:1;Parent=LTnewLM_180015300.1 ### LTnewLM_18 . polypeptide 411712 413196 . + . ID=LTnewLM_180015300.1:pep;Derives_from=LTnewLM_180015300.1;orthologous_to=LmjF.18.0990_mRNA;ortholog_cluster=OG0001659;product=term%3DUTP--glucose-1-phosphate uridylyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01704;Ontology_term=GO:0008152,GO:0070569 LTnewLM_18 Pfam protein_match 411820 413079 . + . Parent=LTnewLM_180015300.1:pep;Name=PF01704;signature_desc=UTP--glucose-1-phosphate uridylyltransferase;Ontology_term=GO:0070569,GO:0008152 ### LTnewLM_18 Liftoff gene 414070 415410 . + . ID=LTnewLM_180015400;coverage=0.997;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.1000_0 LTnewLM_18 Liftoff mRNA 414070 415410 . + . ID=LTnewLM_180015400.1;Parent=LTnewLM_180015400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 414070 415410 . + 0 ID=LTnewLM_180015400.1:CDS:1;Parent=LTnewLM_180015400.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 414070 415410 . + . ID=LTnewLM_180015400.1:pep;Derives_from=LTnewLM_180015400.1;orthologous_to=LmjF.18.1000_mRNA;ortholog_cluster=OG0001660;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_18 Pfam protein_match 415024 415362 . + . Parent=LTnewLM_180015400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_18 AUGUSTUS gene 416718 417056 1 + . ID=LTnewLM_180015500 LTnewLM_18 AUGUSTUS mRNA 416718 417056 1 + . ID=LTnewLM_180015500.1;Parent=LTnewLM_180015500 LTnewLM_18 AUGUSTUS CDS 416718 417056 1 + 0 ID=LTnewLM_180015500.1:CDS:1;Parent=LTnewLM_180015500.1 ### LTnewLM_18 . polypeptide 416718 417056 . + . ID=LTnewLM_180015500.1:pep;Derives_from=LTnewLM_180015500.1;orthologous_to=LmjF.18.1010_mRNA;ortholog_cluster=OG0001661;product=term%3DRoadblock/LC7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03259 LTnewLM_18 Pfam protein_match 416745 417017 . + . Parent=LTnewLM_180015500.1:pep;Name=PF03259;signature_desc=Roadblock/LC7 domain ### LTnewLM_18 AUGUSTUS gene 418609 423171 1 + . ID=LTnewLM_180015600 LTnewLM_18 AUGUSTUS mRNA 418609 423171 1 + . ID=LTnewLM_180015600.1;Parent=LTnewLM_180015600 LTnewLM_18 AUGUSTUS CDS 418609 423171 1 + 0 ID=LTnewLM_180015600.1:CDS:1;Parent=LTnewLM_180015600.1 ### LTnewLM_18 . polypeptide 418609 423171 . + . ID=LTnewLM_180015600.1:pep;Derives_from=LTnewLM_180015600.1;orthologous_to=LmjF.18.1020_mRNA;ortholog_cluster=OG0001662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 424355 424678 1 + . ID=LTnewLM_180015700 LTnewLM_18 AUGUSTUS mRNA 424355 424678 1 + . ID=LTnewLM_180015700.1;Parent=LTnewLM_180015700 LTnewLM_18 AUGUSTUS CDS 424355 424678 1 + 0 ID=LTnewLM_180015700.1:CDS:1;Parent=LTnewLM_180015700.1 ### LTnewLM_18 . polypeptide 424355 424678 . + . ID=LTnewLM_180015700.1:pep;Derives_from=LTnewLM_180015700.1;product=term%3Dhypothetical protein ### LTnewLM_18 AUGUSTUS gene 428870 431332 1 + . ID=LTnewLM_180015800 LTnewLM_18 AUGUSTUS mRNA 428870 431332 1 + . ID=LTnewLM_180015800.1;Parent=LTnewLM_180015800 LTnewLM_18 AUGUSTUS CDS 428870 431332 1 + 0 ID=LTnewLM_180015800.1:CDS:1;Parent=LTnewLM_180015800.1 ### LTnewLM_18 . polypeptide 428870 431332 . + . ID=LTnewLM_180015800.1:pep;Derives_from=LTnewLM_180015800.1;orthologous_to=LmjF.18.1030_mRNA;ortholog_cluster=OG0001663;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 433100 437122 1 + . ID=LTnewLM_180015900 LTnewLM_18 AUGUSTUS mRNA 433100 437122 1 + . ID=LTnewLM_180015900.1;Parent=LTnewLM_180015900 LTnewLM_18 AUGUSTUS CDS 433100 437122 1 + 0 ID=LTnewLM_180015900.1:CDS:1;Parent=LTnewLM_180015900.1 ### LTnewLM_18 . polypeptide 433100 437122 . + . ID=LTnewLM_180015900.1:pep;Derives_from=LTnewLM_180015900.1;orthologous_to=LmjF.18.1040_mRNA;ortholog_cluster=OG0001664;product=term%3DHydantoinase/oxoprolinase N-terminal region/Hydantoinase/oxoprolinase/Hydantoinase B/oxoprolinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05378|Pfam:PF01968|Pfam:PF02538;Ontology_term=GO:0016787,GO:0003824 LTnewLM_18 Pfam protein_match 433145 433792 . + . Parent=LTnewLM_180015900.1:pep;Name=PF05378;signature_desc=Hydantoinase/oxoprolinase N-terminal region LTnewLM_18 Pfam protein_match 433850 434746 . + . Parent=LTnewLM_180015900.1:pep;Name=PF01968;signature_desc=Hydantoinase/oxoprolinase;Ontology_term=GO:0016787 LTnewLM_18 Pfam protein_match 435425 437101 . + . Parent=LTnewLM_180015900.1:pep;Name=PF02538;signature_desc=Hydantoinase B/oxoprolinase;Ontology_term=GO:0003824 ### LTnewLM_18 AUGUSTUS gene 438273 442637 1 + . ID=LTnewLM_180016000 LTnewLM_18 AUGUSTUS mRNA 438273 442637 1 + . ID=LTnewLM_180016000.1;Parent=LTnewLM_180016000 LTnewLM_18 AUGUSTUS CDS 438273 442637 1 + 0 ID=LTnewLM_180016000.1:CDS:1;Parent=LTnewLM_180016000.1 ### LTnewLM_18 . polypeptide 438273 442637 . + . ID=LTnewLM_180016000.1:pep;Derives_from=LTnewLM_180016000.1;orthologous_to=LmjF.18.1050_mRNA;ortholog_cluster=OG0001665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 Liftoff gene 448840 451161 . + . ID=LTnewLM_180016100;coverage=0.998;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.1060_0 LTnewLM_18 Liftoff mRNA 448840 451161 . + . ID=LTnewLM_180016100.1;Parent=LTnewLM_180016100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 448840 451161 . + 0 ID=LTnewLM_180016100.1:CDS:1;Parent=LTnewLM_180016100.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 448840 451161 . + . ID=LTnewLM_180016100.1:pep;Derives_from=LTnewLM_180016100.1;orthologous_to=LmjF.18.1060_mRNA;ortholog_cluster=OG0001666;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_18 Pfam protein_match 449635 450300 . + . Parent=LTnewLM_180016100.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_18 AUGUSTUS gene 451583 454366 0.8 + . ID=LTnewLM_180016200 LTnewLM_18 AUGUSTUS mRNA 451583 454366 0.8 + . ID=LTnewLM_180016200.1;Parent=LTnewLM_180016200 LTnewLM_18 AUGUSTUS CDS 451583 454366 0.8 + 0 ID=LTnewLM_180016200.1:CDS:1;Parent=LTnewLM_180016200.1 ### LTnewLM_18 . polypeptide 451583 454366 . + . ID=LTnewLM_180016200.1:pep;Derives_from=LTnewLM_180016200.1;orthologous_to=LmjF.18.1070_mRNA;ortholog_cluster=OG0001667;product=term%3DVps16%2C N-terminal region/Vps16%2C C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04841|Pfam:PF04840;Ontology_term=GO:0006886,GO:0005737 LTnewLM_18 Pfam protein_match 451655 452920 . + . Parent=LTnewLM_180016200.1:pep;Name=PF04841;signature_desc=Vps16%2C N-terminal region;Ontology_term=GO:0006886,GO:0005737 LTnewLM_18 Pfam protein_match 453242 453604 . + . Parent=LTnewLM_180016200.1:pep;Name=PF04840;signature_desc=Vps16%2C C-terminal region;Ontology_term=GO:0006886,GO:0005737 LTnewLM_18 Pfam protein_match 453806 454288 . + . Parent=LTnewLM_180016200.1:pep;Name=PF04840;signature_desc=Vps16%2C C-terminal region;Ontology_term=GO:0006886,GO:0005737 ### LTnewLM_18 AUGUSTUS gene 455306 456304 1 + . ID=LTnewLM_180016300 LTnewLM_18 AUGUSTUS mRNA 455306 456304 1 + . ID=LTnewLM_180016300.1;Parent=LTnewLM_180016300 LTnewLM_18 AUGUSTUS CDS 455306 456304 1 + 0 ID=LTnewLM_180016300.1:CDS:1;Parent=LTnewLM_180016300.1 ### LTnewLM_18 . polypeptide 455306 456304 . + . ID=LTnewLM_180016300.1:pep;Derives_from=LTnewLM_180016300.1;orthologous_to=LmjF.18.1080_mRNA;ortholog_cluster=OG0001668;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_18 Pfam protein_match 455348 456058 . + . Parent=LTnewLM_180016300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_18 Pfam protein_match 455354 456109 . + . Parent=LTnewLM_180016300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_18 Pfam protein_match 455666 455950 . + . Parent=LTnewLM_180016300.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_18 AUGUSTUS gene 459340 461235 1 + . ID=LTnewLM_180016400 LTnewLM_18 AUGUSTUS mRNA 459340 461235 1 + . ID=LTnewLM_180016400.1;Parent=LTnewLM_180016400 LTnewLM_18 AUGUSTUS CDS 459340 461235 1 + 0 ID=LTnewLM_180016400.1:CDS:1;Parent=LTnewLM_180016400.1 ### LTnewLM_18 . polypeptide 459340 461235 . + . ID=LTnewLM_180016400.1:pep;Derives_from=LTnewLM_180016400.1;orthologous_to=LmjF.18.1090_mRNA;ortholog_cluster=OG0001669;product=term%3D3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00233;Ontology_term=GO:0007165,GO:0004114 LTnewLM_18 Pfam protein_match 460489 461178 . + . Parent=LTnewLM_180016400.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 ### LTnewLM_18 AUGUSTUS gene 463225 464163 1 + . ID=LTnewLM_180016500 LTnewLM_18 AUGUSTUS mRNA 463225 464163 1 + . ID=LTnewLM_180016500.1;Parent=LTnewLM_180016500 LTnewLM_18 AUGUSTUS CDS 463225 464163 1 + 0 ID=LTnewLM_180016500.1:CDS:1;Parent=LTnewLM_180016500.1 ### LTnewLM_18 . polypeptide 463225 464163 . + . ID=LTnewLM_180016500.1:pep;Derives_from=LTnewLM_180016500.1;orthologous_to=LmjF.18.1100_mRNA;ortholog_cluster=OG0001670;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat/Ankyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13606|Pfam:PF00023|Pfam:PF13637;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 463789 463980 . + . Parent=LTnewLM_180016500.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_18 Pfam protein_match 463807 463884 . + . Parent=LTnewLM_180016500.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 463807 463896 . + . Parent=LTnewLM_180016500.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 463813 463965 . + . Parent=LTnewLM_180016500.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_18 Pfam protein_match 463906 464121 . + . Parent=LTnewLM_180016500.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_18 AUGUSTUS gene 464945 467491 1 + . ID=LTnewLM_180016600 LTnewLM_18 AUGUSTUS mRNA 464945 467491 1 + . ID=LTnewLM_180016600.1;Parent=LTnewLM_180016600 LTnewLM_18 AUGUSTUS CDS 464945 467491 1 + 0 ID=LTnewLM_180016600.1:CDS:1;Parent=LTnewLM_180016600.1 ### LTnewLM_18 . polypeptide 464945 467491 . + . ID=LTnewLM_180016600.1:pep;Derives_from=LTnewLM_180016600.1;orthologous_to=LmjF.18.1110_mRNA;ortholog_cluster=OG0001671;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_18 Pfam protein_match 465833 466558 . + . Parent=LTnewLM_180016600.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_18 AUGUSTUS gene 468589 469659 1 + . ID=LTnewLM_180016700 LTnewLM_18 AUGUSTUS mRNA 468589 469659 1 + . ID=LTnewLM_180016700.1;Parent=LTnewLM_180016700 LTnewLM_18 AUGUSTUS CDS 468589 469659 1 + 0 ID=LTnewLM_180016700.1:CDS:1;Parent=LTnewLM_180016700.1 ### LTnewLM_18 . polypeptide 468589 469659 . + . ID=LTnewLM_180016700.1:pep;Derives_from=LTnewLM_180016700.1;orthologous_to=LmjF.18.1120_mRNA;ortholog_cluster=OG0001672;product=term%3DAN1-like Zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01428;Ontology_term=GO:0008270 LTnewLM_18 Pfam protein_match 468625 468732 . + . Parent=LTnewLM_180016700.1:pep;Name=PF01428;signature_desc=AN1-like Zinc finger;Ontology_term=GO:0008270 LTnewLM_18 Pfam protein_match 468946 469056 . + . Parent=LTnewLM_180016700.1:pep;Name=PF01428;signature_desc=AN1-like Zinc finger;Ontology_term=GO:0008270 ### LTnewLM_18 AUGUSTUS gene 471209 471916 1 + . ID=LTnewLM_180016800 LTnewLM_18 AUGUSTUS mRNA 471209 471916 1 + . ID=LTnewLM_180016800.1;Parent=LTnewLM_180016800 LTnewLM_18 AUGUSTUS CDS 471209 471916 1 + 0 ID=LTnewLM_180016800.1:CDS:1;Parent=LTnewLM_180016800.1 ### LTnewLM_18 . polypeptide 471209 471916 . + . ID=LTnewLM_180016800.1:pep;Derives_from=LTnewLM_180016800.1;orthologous_to=LmjF.18.1130_mRNA;ortholog_cluster=OG0001673;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_18 Pfam protein_match 471239 471661 . + . Parent=LTnewLM_180016800.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_18 Pfam protein_match 471251 471652 . + . Parent=LTnewLM_180016800.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_18 Pfam protein_match 471251 471682 . + . Parent=LTnewLM_180016800.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_18 Pfam protein_match 471251 471793 . + . Parent=LTnewLM_180016800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_18 AUGUSTUS gene 475574 476053 2 + . ID=LTnewLM_180016900 LTnewLM_18 AUGUSTUS mRNA 475574 476053 1 + . ID=LTnewLM_180016900.1;Parent=LTnewLM_180016900 LTnewLM_18 AUGUSTUS CDS 475574 476053 1 + 0 ID=LTnewLM_180016900.1:CDS:1;Parent=LTnewLM_180016900.1 LTnewLM_18 AUGUSTUS mRNA 475667 476053 1 + . ID=LTnewLM_180016900.2;Parent=LTnewLM_180016900 LTnewLM_18 AUGUSTUS CDS 475667 476053 1 + 0 ID=LTnewLM_180016900.2:CDS:1;Parent=LTnewLM_180016900.2 ### LTnewLM_18 . polypeptide 475574 476053 . + . ID=LTnewLM_180016900.1:pep;Derives_from=LTnewLM_180016900.1;orthologous_to=LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 . polypeptide 475667 476053 . + . ID=LTnewLM_180016900.2:pep;Derives_from=LTnewLM_180016900.2;orthologous_to=LTnewLM_180016900.1,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 477716 481201 1 + . ID=LTnewLM_180017000 LTnewLM_18 AUGUSTUS mRNA 477716 481201 1 + . ID=LTnewLM_180017000.1;Parent=LTnewLM_180017000 LTnewLM_18 AUGUSTUS CDS 477716 481201 1 + 0 ID=LTnewLM_180017000.1:CDS:1;Parent=LTnewLM_180017000.1 ### LTnewLM_18 . polypeptide 477716 481201 . + . ID=LTnewLM_180017000.1:pep;Derives_from=LTnewLM_180017000.1;orthologous_to=LmjF.18.1140_mRNA;ortholog_cluster=OG0001674;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 481916 483001 1 + . ID=LTnewLM_180017100 LTnewLM_18 AUGUSTUS mRNA 481916 483001 1 + . ID=LTnewLM_180017100.1;Parent=LTnewLM_180017100 LTnewLM_18 AUGUSTUS CDS 481916 483001 1 + 0 ID=LTnewLM_180017100.1:CDS:1;Parent=LTnewLM_180017100.1 ### LTnewLM_18 . polypeptide 481916 483001 . + . ID=LTnewLM_180017100.1:pep;Derives_from=LTnewLM_180017100.1;orthologous_to=LmjF.18.1150_mRNA;ortholog_cluster=OG0001675;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13639;Ontology_term=GO:0008270,GO:0005515 LTnewLM_18 Pfam protein_match 482807 482947 . + . Parent=LTnewLM_180017100.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_18 Pfam protein_match 482816 482932 . + . Parent=LTnewLM_180017100.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 ### LTnewLM_18 AUGUSTUS gene 490253 490582 1 + . ID=LTnewLM_180017200 LTnewLM_18 AUGUSTUS mRNA 490253 490582 1 + . ID=LTnewLM_180017200.1;Parent=LTnewLM_180017200 LTnewLM_18 AUGUSTUS CDS 490253 490582 1 + 0 ID=LTnewLM_180017200.1:CDS:1;Parent=LTnewLM_180017200.1 ### LTnewLM_18 . polypeptide 490253 490582 . + . ID=LTnewLM_180017200.1:pep;Derives_from=LTnewLM_180017200.1;orthologous_to=LmjF.18.1160_mRNA;ortholog_cluster=OG0001676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 493460 494068 1 + . ID=LTnewLM_180017300 LTnewLM_18 AUGUSTUS mRNA 493460 494068 1 + . ID=LTnewLM_180017300.1;Parent=LTnewLM_180017300 LTnewLM_18 AUGUSTUS CDS 493460 494068 1 + 0 ID=LTnewLM_180017300.1:CDS:1;Parent=LTnewLM_180017300.1 ### LTnewLM_18 . polypeptide 493460 494068 . + . ID=LTnewLM_180017300.1:pep;Derives_from=LTnewLM_180017300.1;orthologous_to=LmjF.18.1170_mRNA;ortholog_cluster=OG0001677;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 495630 500258 1 + . ID=LTnewLM_180017400 LTnewLM_18 AUGUSTUS mRNA 495630 500258 1 + . ID=LTnewLM_180017400.1;Parent=LTnewLM_180017400 LTnewLM_18 AUGUSTUS CDS 495630 500258 1 + 0 ID=LTnewLM_180017400.1:CDS:1;Parent=LTnewLM_180017400.1 ### LTnewLM_18 . polypeptide 495630 500258 . + . ID=LTnewLM_180017400.1:pep;Derives_from=LTnewLM_180017400.1;orthologous_to=LmjF.18.1180_mRNA;ortholog_cluster=OG0001678;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 501225 505016 1 + . ID=LTnewLM_180017500 LTnewLM_18 AUGUSTUS mRNA 501225 505016 1 + . ID=LTnewLM_180017500.1;Parent=LTnewLM_180017500 LTnewLM_18 AUGUSTUS CDS 501225 505016 1 + 0 ID=LTnewLM_180017500.1:CDS:1;Parent=LTnewLM_180017500.1 ### LTnewLM_18 . polypeptide 501225 505016 . + . ID=LTnewLM_180017500.1:pep;Derives_from=LTnewLM_180017500.1;orthologous_to=LmjF.18.1190_mRNA;ortholog_cluster=OG0001679;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 505615 506427 1 + . ID=LTnewLM_180017600 LTnewLM_18 AUGUSTUS mRNA 505615 506427 1 + . ID=LTnewLM_180017600.1;Parent=LTnewLM_180017600 LTnewLM_18 AUGUSTUS CDS 505615 506427 1 + 0 ID=LTnewLM_180017600.1:CDS:1;Parent=LTnewLM_180017600.1 ### LTnewLM_18 . polypeptide 505615 506427 . + . ID=LTnewLM_180017600.1:pep;Derives_from=LTnewLM_180017600.1;orthologous_to=LmjF.18.1200_mRNA;ortholog_cluster=OG0001680;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_18 Pfam protein_match 506203 506379 . + . Parent=LTnewLM_180017600.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_18 Liftoff gene 507625 510057 . + . ID=LTnewLM_180017700;coverage=0.990;sequence_ID=0.965;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.18.1210_0 LTnewLM_18 Liftoff mRNA 507625 510057 . + . ID=LTnewLM_180017700.1;Parent=LTnewLM_180017700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 507625 510057 . + 0 ID=LTnewLM_180017700.1:CDS:1;Parent=LTnewLM_180017700.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 507625 510057 . + . ID=LTnewLM_180017700.1:pep;Derives_from=LTnewLM_180017700.1;orthologous_to=LTnewLM_180017800.1,LmjF.18.1210_mRNA,LmjF.18.1220_mRNA;ortholog_cluster=OG0000135;product=term%3DAminoacyl-tRNA editing domain/tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)/Anticodon binding domain/Prolyl-tRNA synthetase%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04073|Pfam:PF00587|Pfam:PF03129|Pfam:PF09180;Ontology_term=GO:0004812,GO:0002161,GO:0005737,GO:0005524,GO:0006433,GO:0004827,GO:0000166,GO:0006418 LTnewLM_18 Pfam protein_match 507967 508350 . + . Parent=LTnewLM_180017700.1:pep;Name=PF04073;signature_desc=Aminoacyl-tRNA editing domain;Ontology_term=GO:0002161 LTnewLM_18 Pfam protein_match 508822 509334 . + . Parent=LTnewLM_180017700.1:pep;Name=PF00587;signature_desc=tRNA synthetase class II core domain (G%2C H%2C P%2C S and T);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_18 Pfam protein_match 509392 509667 . + . Parent=LTnewLM_180017700.1:pep;Name=PF03129;signature_desc=Anticodon binding domain LTnewLM_18 Pfam protein_match 509776 510051 . + . Parent=LTnewLM_180017700.1:pep;Name=PF09180;signature_desc=Prolyl-tRNA synthetase%2C C-terminal;Ontology_term=GO:0000166,GO:0004827,GO:0005524,GO:0006433,GO:0005737 ### LTnewLM_18 . pseudogene 512302 514482 3.67e+03 + . ID=LTnewLM_180017800:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.18.1210:mRNA 84 819;original_prot_length=819 LTnewLM_18 . pseudogenic_transcript 512302 514482 . + . ID=LTnewLM_180017800.1;Parent=LTnewLM_180017800:pseudogene LTnewLM_18 . pseudogenic_exon 512302 514482 . + . ID=LTnewLM_180017800.1:pseudogenic_exon:1;Parent=LTnewLM_180017800.1 ### LTnewLM_18 . polypeptide 512302 514482 . + . ID=LTnewLM_180017800.1:pep;Derives_from=LTnewLM_180017800.1;orthologous_to=LTnewLM_180017700.1,LmjF.18.1210_mRNA,LmjF.18.1220_mRNA;ortholog_cluster=OG0000135;product=term%3DAminoacyl-tRNA editing domain/tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)/Anticodon binding domain/Prolyl-tRNA synthetase%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04073|Pfam:PF00587|Pfam:PF03129|Pfam:PF09180;Ontology_term=GO:0004812,GO:0002161,GO:0005737,GO:0005524,GO:0006433,GO:0004827,GO:0000166,GO:0006418 LTnewLM_18 Pfam protein_match 512395 512781 . + . Parent=LTnewLM_180017800.1:pep;Name=PF04073;signature_desc=Aminoacyl-tRNA editing domain;Ontology_term=GO:0002161 LTnewLM_18 Pfam protein_match 513247 513759 . + . Parent=LTnewLM_180017800.1:pep;Name=PF00587;signature_desc=tRNA synthetase class II core domain (G%2C H%2C P%2C S and T);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_18 Pfam protein_match 513817 514092 . + . Parent=LTnewLM_180017800.1:pep;Name=PF03129;signature_desc=Anticodon binding domain LTnewLM_18 Pfam protein_match 514201 514476 . + . Parent=LTnewLM_180017800.1:pep;Name=PF09180;signature_desc=Prolyl-tRNA synthetase%2C C-terminal;Ontology_term=GO:0000166,GO:0004827,GO:0005524,GO:0006433,GO:0005737 ### LTnewLM_18 AUGUSTUS gene 515441 517303 1 + . ID=LTnewLM_180017900 LTnewLM_18 AUGUSTUS mRNA 515441 517303 1 + . ID=LTnewLM_180017900.1;Parent=LTnewLM_180017900 LTnewLM_18 AUGUSTUS CDS 515441 517303 1 + 0 ID=LTnewLM_180017900.1:CDS:1;Parent=LTnewLM_180017900.1 ### LTnewLM_18 . polypeptide 515441 517303 . + . ID=LTnewLM_180017900.1:pep;Derives_from=LTnewLM_180017900.1;orthologous_to=LmjF.18.1230_mRNA;ortholog_cluster=OG0001681;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 516176 516865 . + . Parent=LTnewLM_180017900.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_18 AUGUSTUS gene 519070 521352 1 + . ID=LTnewLM_180018000 LTnewLM_18 AUGUSTUS mRNA 519070 521352 1 + . ID=LTnewLM_180018000.1;Parent=LTnewLM_180018000 LTnewLM_18 AUGUSTUS CDS 519070 521352 1 + 0 ID=LTnewLM_180018000.1:CDS:1;Parent=LTnewLM_180018000.1 ### LTnewLM_18 . polypeptide 519070 521352 . + . ID=LTnewLM_180018000.1:pep;Derives_from=LTnewLM_180018000.1;orthologous_to=LmjF.18.1240_mRNA;ortholog_cluster=OG0001682;product=term%3DPIH1 N-terminal domain/PIH1 CS-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08190|Pfam:PF18201 LTnewLM_18 Pfam protein_match 519472 519624 . + . Parent=LTnewLM_180018000.1:pep;Name=PF08190;signature_desc=PIH1 N-terminal domain LTnewLM_18 Pfam protein_match 519703 519915 . + . Parent=LTnewLM_180018000.1:pep;Name=PF08190;signature_desc=PIH1 N-terminal domain LTnewLM_18 Pfam protein_match 520159 520458 . + . Parent=LTnewLM_180018000.1:pep;Name=PF18201;signature_desc=PIH1 CS-like domain ### LTnewLM_18 AUGUSTUS gene 523536 525929 1 + . ID=LTnewLM_180018100 LTnewLM_18 AUGUSTUS mRNA 523536 525929 1 + . ID=LTnewLM_180018100.1;Parent=LTnewLM_180018100 LTnewLM_18 AUGUSTUS CDS 523536 525929 1 + 0 ID=LTnewLM_180018100.1:CDS:1;Parent=LTnewLM_180018100.1 ### LTnewLM_18 . polypeptide 523536 525929 . + . ID=LTnewLM_180018100.1:pep;Derives_from=LTnewLM_180018100.1;orthologous_to=LmjF.18.1250_mRNA;ortholog_cluster=OG0001683;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 527415 528377 1 + . ID=LTnewLM_180018200 LTnewLM_18 AUGUSTUS mRNA 527415 528377 1 + . ID=LTnewLM_180018200.1;Parent=LTnewLM_180018200 LTnewLM_18 AUGUSTUS CDS 527415 528377 1 + 0 ID=LTnewLM_180018200.1:CDS:1;Parent=LTnewLM_180018200.1 ### LTnewLM_18 . polypeptide 527415 528377 . + . ID=LTnewLM_180018200.1:pep;Derives_from=LTnewLM_180018200.1;orthologous_to=LTnewLM_180018300.1,LTnewLM_180018400.1,LmjF.18.1260_mRNA,LmjF.18.1300_mRNA;ortholog_cluster=OG0000082;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_18 Pfam protein_match 527472 527711 . + . Parent=LTnewLM_180018200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 527772 528032 . + . Parent=LTnewLM_180018200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 528081 528335 . + . Parent=LTnewLM_180018200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_18 AUGUSTUS gene 530400 531350 1 + . ID=LTnewLM_180018300 LTnewLM_18 AUGUSTUS mRNA 530400 531350 1 + . ID=LTnewLM_180018300.1;Parent=LTnewLM_180018300 LTnewLM_18 AUGUSTUS CDS 530400 531350 1 + 0 ID=LTnewLM_180018300.1:CDS:1;Parent=LTnewLM_180018300.1 ### LTnewLM_18 . polypeptide 530400 531350 . + . ID=LTnewLM_180018300.1:pep;Derives_from=LTnewLM_180018300.1;orthologous_to=LTnewLM_180018200.1,LTnewLM_180018400.1,LmjF.18.1260_mRNA,LmjF.18.1300_mRNA;ortholog_cluster=OG0000082;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_18 Pfam protein_match 530445 530684 . + . Parent=LTnewLM_180018300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 530745 531005 . + . Parent=LTnewLM_180018300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 531054 531308 . + . Parent=LTnewLM_180018300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_18 AUGUSTUS gene 533380 534306 1 + . ID=LTnewLM_180018400 LTnewLM_18 AUGUSTUS mRNA 533380 534306 1 + . ID=LTnewLM_180018400.1;Parent=LTnewLM_180018400 LTnewLM_18 AUGUSTUS CDS 533380 534306 1 + 0 ID=LTnewLM_180018400.1:CDS:1;Parent=LTnewLM_180018400.1 ### LTnewLM_18 . polypeptide 533380 534306 . + . ID=LTnewLM_180018400.1:pep;Derives_from=LTnewLM_180018400.1;orthologous_to=LTnewLM_180018200.1,LTnewLM_180018300.1,LmjF.18.1260_mRNA,LmjF.18.1300_mRNA;ortholog_cluster=OG0000082;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_18 Pfam protein_match 533425 533664 . + . Parent=LTnewLM_180018400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 533725 533985 . + . Parent=LTnewLM_180018400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_18 Pfam protein_match 534034 534288 . + . Parent=LTnewLM_180018400.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_18 . pseudogene 536935 540114 . + . ID=LTnewLM_180018500:pseudogene;coverage=0.982;sequence_ID=0.908;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.18.1310_0;has_internal_stop=true LTnewLM_18 . pseudogenic_transcript 536935 540114 . + . ID=LTnewLM_180018500.1;Parent=LTnewLM_180018500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 537687 540114 . + . ID=LTnewLM_180018500.1:pseudogenic_exon:1;Parent=LTnewLM_180018500.1;extra_copy_number=0 LTnewLM_18 . pseudogenic_transcript 537827 540114 . + . ID=LTnewLM_180018500.2;Parent=LTnewLM_180018500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 . pseudogenic_exon 537994 540114 . + . ID=LTnewLM_180018500.2:pseudogenic_exon:1;Parent=LTnewLM_180018500.2;extra_copy_number=0 ### LTnewLM_18 . polypeptide 537687 540114 . + . ID=LTnewLM_180018500.1:pep;Derives_from=LTnewLM_180018500.1;product=term%3Dhypothetical protein ### LTnewLM_18 . polypeptide 537994 540114 . + . ID=LTnewLM_180018500.2:pep;Derives_from=LTnewLM_180018500.2;orthologous_to=LmjF.18.1310.1_mRNA,LmjF.18.1310.2_mRNA;ortholog_cluster=OG0000517;product=term%3DAcetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583;Ontology_term=GO:0008080 LTnewLM_18 Pfam protein_match 538690 538857 . + . Parent=LTnewLM_180018500.2:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_18 AUGUSTUS gene 541055 545461 1 + . ID=LTnewLM_180018600 LTnewLM_18 AUGUSTUS mRNA 541055 545461 1 + . ID=LTnewLM_180018600.1;Parent=LTnewLM_180018600 LTnewLM_18 AUGUSTUS CDS 541055 545461 1 + 0 ID=LTnewLM_180018600.1:CDS:1;Parent=LTnewLM_180018600.1 ### LTnewLM_18 . polypeptide 541055 545461 . + . ID=LTnewLM_180018600.1:pep;Derives_from=LTnewLM_180018600.1;orthologous_to=LmjF.18.1320_mRNA;ortholog_cluster=OG0001684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 549139 550908 1 + . ID=LTnewLM_180018700 LTnewLM_18 AUGUSTUS mRNA 549139 550908 1 + . ID=LTnewLM_180018700.1;Parent=LTnewLM_180018700 LTnewLM_18 AUGUSTUS CDS 549139 550908 1 + 0 ID=LTnewLM_180018700.1:CDS:1;Parent=LTnewLM_180018700.1 ### LTnewLM_18 . polypeptide 549139 550908 . + . ID=LTnewLM_180018700.1:pep;Derives_from=LTnewLM_180018700.1;orthologous_to=LmjF.18.1330_mRNA;ortholog_cluster=OG0001685;product=term%3DCytidylyltransferase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01467;Ontology_term=GO:0003824,GO:0009058 LTnewLM_18 Pfam protein_match 550456 550734 . + . Parent=LTnewLM_180018700.1:pep;Name=PF01467;signature_desc=Cytidylyltransferase-like;Ontology_term=GO:0003824,GO:0009058 ### LTnewLM_18 AUGUSTUS gene 556105 558408 1 + . ID=LTnewLM_180018800 LTnewLM_18 AUGUSTUS mRNA 556105 558408 1 + . ID=LTnewLM_180018800.1;Parent=LTnewLM_180018800 LTnewLM_18 AUGUSTUS CDS 556105 558408 1 + 0 ID=LTnewLM_180018800.1:CDS:1;Parent=LTnewLM_180018800.1 ### LTnewLM_18 . polypeptide 556105 558408 . + . ID=LTnewLM_180018800.1:pep;Derives_from=LTnewLM_180018800.1;orthologous_to=LmjF.18.1340_mRNA;ortholog_cluster=OG0001686;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 569220 571097 1 + . ID=LTnewLM_180018900 LTnewLM_18 AUGUSTUS mRNA 569220 571097 1 + . ID=LTnewLM_180018900.1;Parent=LTnewLM_180018900 LTnewLM_18 AUGUSTUS CDS 569220 571097 1 + 0 ID=LTnewLM_180018900.1:CDS:1;Parent=LTnewLM_180018900.1 ### LTnewLM_18 . polypeptide 569220 571097 . + . ID=LTnewLM_180018900.1:pep;Derives_from=LTnewLM_180018900.1;orthologous_to=LmjF.18.1350_mRNA;ortholog_cluster=OG0001687;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 586637 589522 1 + . ID=LTnewLM_180019000 LTnewLM_18 AUGUSTUS mRNA 586637 589522 1 + . ID=LTnewLM_180019000.1;Parent=LTnewLM_180019000 LTnewLM_18 AUGUSTUS CDS 586637 589522 1 + 0 ID=LTnewLM_180019000.1:CDS:1;Parent=LTnewLM_180019000.1 ### LTnewLM_18 . polypeptide 586637 589522 . + . ID=LTnewLM_180019000.1:pep;Derives_from=LTnewLM_180019000.1;orthologous_to=LmjF.18.1360_mRNA;ortholog_cluster=OG0001688;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 590859 593327 1 + . ID=LTnewLM_180019100 LTnewLM_18 AUGUSTUS mRNA 590859 593327 1 + . ID=LTnewLM_180019100.1;Parent=LTnewLM_180019100 LTnewLM_18 AUGUSTUS CDS 590859 593327 1 + 0 ID=LTnewLM_180019100.1:CDS:1;Parent=LTnewLM_180019100.1 ### LTnewLM_18 . polypeptide 590859 593327 . + . ID=LTnewLM_180019100.1:pep;Derives_from=LTnewLM_180019100.1;orthologous_to=LmjF.18.1370_mRNA;ortholog_cluster=OG0001689;product=term%3DHsp70 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012 LTnewLM_18 Pfam protein_match 590865 592061 . + . Parent=LTnewLM_180019100.1:pep;Name=PF00012;signature_desc=Hsp70 protein ### LTnewLM_18 AUGUSTUS gene 596207 597343 1 + . ID=LTnewLM_180019200 LTnewLM_18 AUGUSTUS mRNA 596207 597343 1 + . ID=LTnewLM_180019200.1;Parent=LTnewLM_180019200 LTnewLM_18 AUGUSTUS CDS 596207 597343 1 + 0 ID=LTnewLM_180019200.1:CDS:1;Parent=LTnewLM_180019200.1 ### LTnewLM_18 . polypeptide 596207 597343 . + . ID=LTnewLM_180019200.1:pep;Derives_from=LTnewLM_180019200.1;orthologous_to=LmjF.18.1380_mRNA;ortholog_cluster=OG0001690;product=term%3DDehydrogenase E1 component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00676;Ontology_term=GO:0016624,GO:0008152 LTnewLM_18 Pfam protein_match 596366 597256 . + . Parent=LTnewLM_180019200.1:pep;Name=PF00676;signature_desc=Dehydrogenase E1 component;Ontology_term=GO:0016624,GO:0008152 ### LTnewLM_18 Liftoff gene 599560 600858 . + . ID=LTnewLM_180019300;coverage=1.0;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.18.1390_0 LTnewLM_18 Liftoff mRNA 599560 600858 . + . ID=LTnewLM_180019300.1;Parent=LTnewLM_180019300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 599560 600858 . + 0 ID=LTnewLM_180019300.1:CDS:1;Parent=LTnewLM_180019300.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 599560 600858 . + . ID=LTnewLM_180019300.1:pep;Derives_from=LTnewLM_180019300.1;orthologous_to=LmjF.18.1390_mRNA;ortholog_cluster=OG0001691;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 601443 601949 1 + . ID=LTnewLM_180019400 LTnewLM_18 AUGUSTUS mRNA 601443 601949 1 + . ID=LTnewLM_180019400.1;Parent=LTnewLM_180019400 LTnewLM_18 AUGUSTUS CDS 601443 601949 1 + 0 ID=LTnewLM_180019400.1:CDS:1;Parent=LTnewLM_180019400.1 ### LTnewLM_18 . polypeptide 601443 601949 . + . ID=LTnewLM_180019400.1:pep;Derives_from=LTnewLM_180019400.1;orthologous_to=LTnewLM_360048200.1,LmjF.18.1400_mRNA,LmjF.36.3740_mRNA;ortholog_cluster=OG0000136;product=term%3DRibosomal protein L34e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01199;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_18 Pfam protein_match 601452 601730 . + . Parent=LTnewLM_180019400.1:pep;Name=PF01199;signature_desc=Ribosomal protein L34e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_18 AUGUSTUS gene 603130 606242 0.47 + . ID=LTnewLM_180019500 LTnewLM_18 AUGUSTUS mRNA 603130 606242 0.47 + . ID=LTnewLM_180019500.1;Parent=LTnewLM_180019500 LTnewLM_18 AUGUSTUS CDS 603130 605967 0.78 + 0 ID=LTnewLM_180019500.1:CDS:1;Parent=LTnewLM_180019500.1 LTnewLM_18 AUGUSTUS CDS 606033 606242 0.56 + 0 ID=LTnewLM_180019500.1:CDS:2;Parent=LTnewLM_180019500.1 ### LTnewLM_18 . polypeptide 603130 606242 . + . ID=LTnewLM_180019500.1:pep;Derives_from=LTnewLM_180019500.1;orthologous_to=LmjF.18.1410_mRNA;ortholog_cluster=OG0001692;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 608134 610818 1 + . ID=LTnewLM_180019600 LTnewLM_18 AUGUSTUS mRNA 608134 610818 1 + . ID=LTnewLM_180019600.1;Parent=LTnewLM_180019600 LTnewLM_18 AUGUSTUS CDS 608134 610818 1 + 0 ID=LTnewLM_180019600.1:CDS:1;Parent=LTnewLM_180019600.1 ### LTnewLM_18 . polypeptide 608134 610818 . + . ID=LTnewLM_180019600.1:pep;Derives_from=LTnewLM_180019600.1;orthologous_to=LmjF.18.1420_mRNA;ortholog_cluster=OG0001693;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 608719 608814 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 608827 608886 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 608971 609069 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 609082 609147 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 609193 609252 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 609304 609390 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 609409 609507 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_18 Pfam protein_match 609547 609630 . + . Parent=LTnewLM_180019600.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_18 AUGUSTUS gene 614000 614547 0.71 + . ID=LTnewLM_180019700 LTnewLM_18 AUGUSTUS mRNA 614000 614547 0.71 + . ID=LTnewLM_180019700.1;Parent=LTnewLM_180019700 LTnewLM_18 AUGUSTUS CDS 614000 614075 0.72 + 0 ID=LTnewLM_180019700.1:CDS:1;Parent=LTnewLM_180019700.1 LTnewLM_18 AUGUSTUS CDS 614126 614547 0.73 + 2 ID=LTnewLM_180019700.1:CDS:2;Parent=LTnewLM_180019700.1 ### LTnewLM_18 . polypeptide 614000 614547 . + . ID=LTnewLM_180019700.1:pep;Derives_from=LTnewLM_180019700.1;product=term%3Dhypothetical protein ### LTnewLM_18 AUGUSTUS gene 614843 615280 1 + . ID=LTnewLM_180019800 LTnewLM_18 AUGUSTUS mRNA 614843 615280 1 + . ID=LTnewLM_180019800.1;Parent=LTnewLM_180019800 LTnewLM_18 AUGUSTUS CDS 614843 615280 1 + 0 ID=LTnewLM_180019800.1:CDS:1;Parent=LTnewLM_180019800.1 ### LTnewLM_18 . polypeptide 614843 615280 . + . ID=LTnewLM_180019800.1:pep;Derives_from=LTnewLM_180019800.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 621553 624903 1 + . ID=LTnewLM_180019900 LTnewLM_18 AUGUSTUS mRNA 621553 624903 1 + . ID=LTnewLM_180019900.1;Parent=LTnewLM_180019900 LTnewLM_18 AUGUSTUS CDS 621553 624903 1 + 0 ID=LTnewLM_180019900.1:CDS:1;Parent=LTnewLM_180019900.1 ### LTnewLM_18 . polypeptide 621553 624903 . + . ID=LTnewLM_180019900.1:pep;Derives_from=LTnewLM_180019900.1;orthologous_to=LmjF.18.1430_mRNA;ortholog_cluster=OG0001694;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_18 Pfam protein_match 621568 621750 . + . Parent=LTnewLM_180019900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_18 AUGUSTUS gene 626971 627672 1 + . ID=LTnewLM_180020000 LTnewLM_18 AUGUSTUS mRNA 626971 627672 1 + . ID=LTnewLM_180020000.1;Parent=LTnewLM_180020000 LTnewLM_18 AUGUSTUS CDS 626971 627672 1 + 0 ID=LTnewLM_180020000.1:CDS:1;Parent=LTnewLM_180020000.1 ### LTnewLM_18 . polypeptide 626971 627672 . + . ID=LTnewLM_180020000.1:pep;Derives_from=LTnewLM_180020000.1;orthologous_to=LmjF.18.1440_mRNA;ortholog_cluster=OG0001695;product=term%3DEF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499 LTnewLM_18 Pfam protein_match 627400 627621 . + . Parent=LTnewLM_180020000.1:pep;Name=PF13499;signature_desc=EF-hand domain pair ### LTnewLM_18 AUGUSTUS gene 633636 639755 1 + . ID=LTnewLM_180020100 LTnewLM_18 AUGUSTUS mRNA 633636 639755 1 + . ID=LTnewLM_180020100.1;Parent=LTnewLM_180020100 LTnewLM_18 AUGUSTUS CDS 633636 639755 1 + 0 ID=LTnewLM_180020100.1:CDS:1;Parent=LTnewLM_180020100.1 ### LTnewLM_18 . polypeptide 633636 639755 . + . ID=LTnewLM_180020100.1:pep;Derives_from=LTnewLM_180020100.1;orthologous_to=LmjF.18.1450_mRNA;ortholog_cluster=OG0001696;product=term%3DProtein of unknown function (DUF3648)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12364 LTnewLM_18 Pfam protein_match 638211 638711 . + . Parent=LTnewLM_180020100.1:pep;Name=PF12364;signature_desc=Protein of unknown function (DUF3648) ### LTnewLM_18 AUGUSTUS gene 641422 641850 0.78 + . ID=LTnewLM_180020200 LTnewLM_18 AUGUSTUS mRNA 641422 641850 0.78 + . ID=LTnewLM_180020200.1;Parent=LTnewLM_180020200 LTnewLM_18 AUGUSTUS CDS 641422 641850 0.78 + 0 ID=LTnewLM_180020200.1:CDS:1;Parent=LTnewLM_180020200.1 ### LTnewLM_18 . polypeptide 641422 641850 . + . ID=LTnewLM_180020200.1:pep;Derives_from=LTnewLM_180020200.1;product=term%3Dhypothetical protein ### LTnewLM_18 AUGUSTUS gene 644410 647139 1 + . ID=LTnewLM_180020300 LTnewLM_18 AUGUSTUS mRNA 644410 647139 1 + . ID=LTnewLM_180020300.1;Parent=LTnewLM_180020300 LTnewLM_18 AUGUSTUS CDS 644410 647139 1 + 0 ID=LTnewLM_180020300.1:CDS:1;Parent=LTnewLM_180020300.1 ### LTnewLM_18 . polypeptide 644410 647139 . + . ID=LTnewLM_180020300.1:pep;Derives_from=LTnewLM_180020300.1;orthologous_to=LmjF.18.1460_mRNA;ortholog_cluster=OG0001697;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 647942 648991 1 + . ID=LTnewLM_180020400 LTnewLM_18 AUGUSTUS mRNA 647942 648991 1 + . ID=LTnewLM_180020400.1;Parent=LTnewLM_180020400 LTnewLM_18 AUGUSTUS CDS 647942 648991 1 + 0 ID=LTnewLM_180020400.1:CDS:1;Parent=LTnewLM_180020400.1 ### LTnewLM_18 . polypeptide 647942 648991 . + . ID=LTnewLM_180020400.1:pep;Derives_from=LTnewLM_180020400.1;orthologous_to=LmjF.18.1470_mRNA;ortholog_cluster=OG0001698;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 650554 651468 1 + . ID=LTnewLM_180020500 LTnewLM_18 AUGUSTUS mRNA 650554 651468 1 + . ID=LTnewLM_180020500.1;Parent=LTnewLM_180020500 LTnewLM_18 AUGUSTUS CDS 650554 651468 1 + 0 ID=LTnewLM_180020500.1:CDS:1;Parent=LTnewLM_180020500.1 ### LTnewLM_18 . polypeptide 650554 651468 . + . ID=LTnewLM_180020500.1:pep;Derives_from=LTnewLM_180020500.1;orthologous_to=LmjF.18.1480_mRNA;ortholog_cluster=OG0001699;product=term%3D2Fe-2S iron-sulfur cluster binding domain/NADH-ubiquinone oxidoreductase-G iron-sulfur binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111|Pfam:PF13510|Pfam:PF10588;Ontology_term=GO:0055114,GO:0009055,GO:0016491,GO:0051536 LTnewLM_18 Pfam protein_match 650806 650979 . + . Parent=LTnewLM_180020500.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 LTnewLM_18 Pfam protein_match 650830 651018 . + . Parent=LTnewLM_180020500.1:pep;Name=PF13510;signature_desc=2Fe-2S iron-sulfur cluster binding domain LTnewLM_18 Pfam protein_match 651040 651147 . + . Parent=LTnewLM_180020500.1:pep;Name=PF10588;signature_desc=NADH-ubiquinone oxidoreductase-G iron-sulfur binding region;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_18 AUGUSTUS gene 653717 654271 1 + . ID=LTnewLM_180020600 LTnewLM_18 AUGUSTUS mRNA 653717 654271 1 + . ID=LTnewLM_180020600.1;Parent=LTnewLM_180020600 LTnewLM_18 AUGUSTUS CDS 653717 654271 1 + 0 ID=LTnewLM_180020600.1:CDS:1;Parent=LTnewLM_180020600.1 ### LTnewLM_18 . polypeptide 653717 654271 . + . ID=LTnewLM_180020600.1:pep;Derives_from=LTnewLM_180020600.1;orthologous_to=LmjF.18.1490_mRNA;ortholog_cluster=OG0001700;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_18 Pfam protein_match 653759 653983 . + . Parent=LTnewLM_180020600.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_18 Liftoff gene 655331 658732 . + . ID=LTnewLM_180020700;coverage=0.999;sequence_ID=0.943;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.18.1500_0 LTnewLM_18 Liftoff mRNA 655331 658732 . + . ID=LTnewLM_180020700.1;Parent=LTnewLM_180020700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 655331 658732 . + 0 ID=LTnewLM_180020700.1:CDS:1;Parent=LTnewLM_180020700.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 655331 658732 . + . ID=LTnewLM_180020700.1:pep;Derives_from=LTnewLM_180020700.1;orthologous_to=LmjF.18.1500_mRNA;ortholog_cluster=OG0001701;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 660311 663235 1 + . ID=LTnewLM_180020800 LTnewLM_18 AUGUSTUS mRNA 660311 663235 1 + . ID=LTnewLM_180020800.1;Parent=LTnewLM_180020800 LTnewLM_18 AUGUSTUS CDS 660311 663235 1 + 0 ID=LTnewLM_180020800.1:CDS:1;Parent=LTnewLM_180020800.1 ### LTnewLM_18 . polypeptide 660311 663235 . + . ID=LTnewLM_180020800.1:pep;Derives_from=LTnewLM_180020800.1;orthologous_to=LTnewLM_180020900.1,LmjF.18.1510_mRNA,LmjF.18.1520_mRNA;ortholog_cluster=OG0000137;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702;Ontology_term=GO:0000166,GO:0046872 LTnewLM_18 Pfam protein_match 660482 660631 . + . Parent=LTnewLM_180020800.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_18 Pfam protein_match 660758 661294 . + . Parent=LTnewLM_180020800.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_18 Pfam protein_match 661343 662158 . + . Parent=LTnewLM_180020800.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase ### LTnewLM_18 AUGUSTUS gene 665346 668270 1 + . ID=LTnewLM_180020900 LTnewLM_18 AUGUSTUS mRNA 665346 668270 1 + . ID=LTnewLM_180020900.1;Parent=LTnewLM_180020900 LTnewLM_18 AUGUSTUS CDS 665346 668270 1 + 0 ID=LTnewLM_180020900.1:CDS:1;Parent=LTnewLM_180020900.1 ### LTnewLM_18 . polypeptide 665346 668270 . + . ID=LTnewLM_180020900.1:pep;Derives_from=LTnewLM_180020900.1;orthologous_to=LTnewLM_180020800.1,LmjF.18.1510_mRNA,LmjF.18.1520_mRNA;ortholog_cluster=OG0000137;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702;Ontology_term=GO:0000166,GO:0046872 LTnewLM_18 Pfam protein_match 665517 665666 . + . Parent=LTnewLM_180020900.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_18 Pfam protein_match 665793 666329 . + . Parent=LTnewLM_180020900.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_18 Pfam protein_match 666378 667193 . + . Parent=LTnewLM_180020900.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase ### LTnewLM_18 Liftoff gene 672289 676266 . + . ID=LTnewLM_180021000;coverage=0.998;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.18.1530_0 LTnewLM_18 Liftoff mRNA 672289 676266 . + . ID=LTnewLM_180021000.1;Parent=LTnewLM_180021000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_18 Liftoff CDS 672289 676266 . + 0 ID=LTnewLM_180021000.1:CDS:1;Parent=LTnewLM_180021000.1;extra_copy_number=0 ### LTnewLM_18 . polypeptide 672289 676266 . + . ID=LTnewLM_180021000.1:pep;Derives_from=LTnewLM_180021000.1;orthologous_to=LmjF.18.1530_mRNA;ortholog_cluster=OG0001702;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_18 Pfam protein_match 673138 673989 . + . Parent=LTnewLM_180021000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_18 Pfam protein_match 673141 673422 . + . Parent=LTnewLM_180021000.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_18 AUGUSTUS gene 677013 678104 1 + . ID=LTnewLM_180021100 LTnewLM_18 AUGUSTUS mRNA 677013 678104 1 + . ID=LTnewLM_180021100.1;Parent=LTnewLM_180021100 LTnewLM_18 AUGUSTUS CDS 677013 678104 1 + 0 ID=LTnewLM_180021100.1:CDS:1;Parent=LTnewLM_180021100.1 ### LTnewLM_18 . polypeptide 677013 678104 . + . ID=LTnewLM_180021100.1:pep;Derives_from=LTnewLM_180021100.1;orthologous_to=LmjF.18.1540_mRNA;ortholog_cluster=OG0001703;product=term%3DUAA transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08449;Ontology_term=GO:0055085 LTnewLM_18 Pfam protein_match 677025 677633 . + . Parent=LTnewLM_180021100.1:pep;Name=PF08449;signature_desc=UAA transporter family;Ontology_term=GO:0055085 LTnewLM_18 Pfam protein_match 677691 677993 . + . Parent=LTnewLM_180021100.1:pep;Name=PF08449;signature_desc=UAA transporter family;Ontology_term=GO:0055085 ### LTnewLM_18 AUGUSTUS gene 678697 679932 1 + . ID=LTnewLM_180021200 LTnewLM_18 AUGUSTUS mRNA 678697 679932 1 + . ID=LTnewLM_180021200.1;Parent=LTnewLM_180021200 LTnewLM_18 AUGUSTUS CDS 678697 679932 1 + 0 ID=LTnewLM_180021200.1:CDS:1;Parent=LTnewLM_180021200.1 ### LTnewLM_18 . polypeptide 678697 679932 . + . ID=LTnewLM_180021200.1:pep;Derives_from=LTnewLM_180021200.1;orthologous_to=LmjF.18.1550_mRNA;ortholog_cluster=OG0001704;product=term%3DBTB/POZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00651;Ontology_term=GO:0005515 LTnewLM_18 Pfam protein_match 678745 678954 . + . Parent=LTnewLM_180021200.1:pep;Name=PF00651;signature_desc=BTB/POZ domain;Ontology_term=GO:0005515 ### LTnewLM_18 AUGUSTUS gene 680603 682294 1 + . ID=LTnewLM_180021300 LTnewLM_18 AUGUSTUS mRNA 680603 682294 1 + . ID=LTnewLM_180021300.1;Parent=LTnewLM_180021300 LTnewLM_18 AUGUSTUS CDS 680603 682294 1 + 0 ID=LTnewLM_180021300.1:CDS:1;Parent=LTnewLM_180021300.1 ### LTnewLM_18 . polypeptide 680603 682294 . + . ID=LTnewLM_180021300.1:pep;Derives_from=LTnewLM_180021300.1;orthologous_to=LmjF.18.1560_mRNA;ortholog_cluster=OG0001705;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 684236 684700 1 + . ID=LTnewLM_180021400 LTnewLM_18 AUGUSTUS mRNA 684236 684700 1 + . ID=LTnewLM_180021400.1;Parent=LTnewLM_180021400 LTnewLM_18 AUGUSTUS CDS 684236 684700 1 + 0 ID=LTnewLM_180021400.1:CDS:1;Parent=LTnewLM_180021400.1 ### LTnewLM_18 . polypeptide 684236 684700 . + . ID=LTnewLM_180021400.1:pep;Derives_from=LTnewLM_180021400.1;orthologous_to=LTnewLM_090016900.1,LmjF.18.1570_mRNA;ortholog_cluster=OG0000363;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Prokaryotic RING finger family 4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF14447 LTnewLM_18 Pfam protein_match 684539 684673 . + . Parent=LTnewLM_180021400.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_18 Pfam protein_match 684548 684670 . + . Parent=LTnewLM_180021400.1:pep;Name=PF14447;signature_desc=Prokaryotic RING finger family 4 ### LTnewLM_18 AUGUSTUS gene 687041 687985 1 + . ID=LTnewLM_180021500 LTnewLM_18 AUGUSTUS mRNA 687041 687985 1 + . ID=LTnewLM_180021500.1;Parent=LTnewLM_180021500 LTnewLM_18 AUGUSTUS CDS 687041 687985 1 + 0 ID=LTnewLM_180021500.1:CDS:1;Parent=LTnewLM_180021500.1 ### LTnewLM_18 . polypeptide 687041 687985 . + . ID=LTnewLM_180021500.1:pep;Derives_from=LTnewLM_180021500.1;orthologous_to=LmjF.18.1580_mRNA;ortholog_cluster=OG0001706;product=term%3DInosine-uridine preferring nucleoside hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01156 LTnewLM_18 Pfam protein_match 687053 687937 . + . Parent=LTnewLM_180021500.1:pep;Name=PF01156;signature_desc=Inosine-uridine preferring nucleoside hydrolase ### LTnewLM_18 AUGUSTUS gene 690439 691080 1 + . ID=LTnewLM_180021600 LTnewLM_18 AUGUSTUS mRNA 690439 691080 1 + . ID=LTnewLM_180021600.1;Parent=LTnewLM_180021600 LTnewLM_18 AUGUSTUS CDS 690439 691080 1 + 0 ID=LTnewLM_180021600.1:CDS:1;Parent=LTnewLM_180021600.1 ### LTnewLM_18 . polypeptide 690439 691080 . + . ID=LTnewLM_180021600.1:pep;Derives_from=LTnewLM_180021600.1;orthologous_to=LmjF.18.1590_mRNA;ortholog_cluster=OG0001707;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 692988 695378 1 + . ID=LTnewLM_180021700 LTnewLM_18 AUGUSTUS mRNA 692988 695378 1 + . ID=LTnewLM_180021700.1;Parent=LTnewLM_180021700 LTnewLM_18 AUGUSTUS CDS 692988 695378 1 + 0 ID=LTnewLM_180021700.1:CDS:1;Parent=LTnewLM_180021700.1 ### LTnewLM_18 . polypeptide 692988 695378 . + . ID=LTnewLM_180021700.1:pep;Derives_from=LTnewLM_180021700.1;orthologous_to=LmjF.18.1600_mRNA;ortholog_cluster=OG0001708;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_18 Pfam protein_match 693009 693407 . + . Parent=LTnewLM_180021700.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_18 Pfam protein_match 693018 693935 . + . Parent=LTnewLM_180021700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_18 AUGUSTUS gene 696014 697978 1 + . ID=LTnewLM_180021800 LTnewLM_18 AUGUSTUS mRNA 696014 697978 1 + . ID=LTnewLM_180021800.1;Parent=LTnewLM_180021800 LTnewLM_18 AUGUSTUS CDS 696014 697978 1 + 0 ID=LTnewLM_180021800.1:CDS:1;Parent=LTnewLM_180021800.1 ### LTnewLM_18 . polypeptide 696014 697978 . + . ID=LTnewLM_180021800.1:pep;Derives_from=LTnewLM_180021800.1;orthologous_to=LmjF.18.1610_mRNA;ortholog_cluster=OG0001709;product=term%3DNoc2p family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03715 LTnewLM_18 Pfam protein_match 696935 697825 . + . Parent=LTnewLM_180021800.1:pep;Name=PF03715;signature_desc=Noc2p family ### LTnewLM_18 AUGUSTUS gene 699793 700224 1 + . ID=LTnewLM_180021900 LTnewLM_18 AUGUSTUS mRNA 699793 700224 1 + . ID=LTnewLM_180021900.1;Parent=LTnewLM_180021900 LTnewLM_18 AUGUSTUS CDS 699793 700224 1 + 0 ID=LTnewLM_180021900.1:CDS:1;Parent=LTnewLM_180021900.1 ### LTnewLM_18 . polypeptide 699793 700224 . + . ID=LTnewLM_180021900.1:pep;Derives_from=LTnewLM_180021900.1;orthologous_to=LmjF.18.1620_mRNA;ortholog_cluster=OG0001710;product=term%3DGot1/Sft2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04178;Ontology_term=GO:0016192 LTnewLM_18 Pfam protein_match 699835 700131 . + . Parent=LTnewLM_180021900.1:pep;Name=PF04178;signature_desc=Got1/Sft2-like family;Ontology_term=GO:0016192 ### LTnewLM_18 AUGUSTUS gene 701214 701891 1 + . ID=LTnewLM_180022000 LTnewLM_18 AUGUSTUS mRNA 701214 701891 1 + . ID=LTnewLM_180022000.1;Parent=LTnewLM_180022000 LTnewLM_18 AUGUSTUS CDS 701214 701891 1 + 0 ID=LTnewLM_180022000.1:CDS:1;Parent=LTnewLM_180022000.1 ### LTnewLM_18 . polypeptide 701214 701891 . + . ID=LTnewLM_180022000.1:pep;Derives_from=LTnewLM_180022000.1;orthologous_to=LmjF.18.1625_mRNA;ortholog_cluster=OG0001711;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 704195 704962 1 + . ID=LTnewLM_180022100 LTnewLM_18 AUGUSTUS mRNA 704195 704962 1 + . ID=LTnewLM_180022100.1;Parent=LTnewLM_180022100 LTnewLM_18 AUGUSTUS CDS 704195 704962 1 + 0 ID=LTnewLM_180022100.1:CDS:1;Parent=LTnewLM_180022100.1 ### LTnewLM_18 . polypeptide 704195 704962 . + . ID=LTnewLM_180022100.1:pep;Derives_from=LTnewLM_180022100.1;orthologous_to=LmjF.18.1630_mRNA;ortholog_cluster=OG0001712;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 705794 706150 1 + . ID=LTnewLM_180022200 LTnewLM_18 AUGUSTUS mRNA 705794 706150 1 + . ID=LTnewLM_180022200.1;Parent=LTnewLM_180022200 LTnewLM_18 AUGUSTUS CDS 705794 706150 1 + 0 ID=LTnewLM_180022200.1:CDS:1;Parent=LTnewLM_180022200.1 ### LTnewLM_18 . polypeptide 705794 706150 . + . ID=LTnewLM_180022200.1:pep;Derives_from=LTnewLM_180022200.1;orthologous_to=LmjF.18.1640_mRNA;ortholog_cluster=OG0001713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_18 AUGUSTUS gene 707350 709092 1 + . ID=LTnewLM_180022300 LTnewLM_18 AUGUSTUS mRNA 707350 709092 1 + . ID=LTnewLM_180022300.1;Parent=LTnewLM_180022300 LTnewLM_18 AUGUSTUS CDS 707350 709092 1 + 0 ID=LTnewLM_180022300.1:CDS:1;Parent=LTnewLM_180022300.1 ### LTnewLM_18 . polypeptide 707350 709092 . + . ID=LTnewLM_180022300.1:pep;Derives_from=LTnewLM_180022300.1;orthologous_to=LmjF.18.1650_mRNA;ortholog_cluster=OG0001714;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_18 Pfam protein_match 708904 709074 . + . Parent=LTnewLM_180022300.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_18 AUGUSTUS gene 710298 712361 1 + . ID=LTnewLM_180022400 LTnewLM_18 AUGUSTUS mRNA 710298 712361 1 + . ID=LTnewLM_180022400.1;Parent=LTnewLM_180022400 LTnewLM_18 AUGUSTUS CDS 710298 712361 1 + 0 ID=LTnewLM_180022400.1:CDS:1;Parent=LTnewLM_180022400.1 ### LTnewLM_18 . polypeptide 710298 712361 . + . ID=LTnewLM_180022400.1:pep;Derives_from=LTnewLM_180022400.1;orthologous_to=LmjF.18.1660_mRNA;ortholog_cluster=OG0001715;product=term%3DGlutamate-cysteine ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03074;Ontology_term=GO:0004357,GO:0006750 LTnewLM_18 Pfam protein_match 711234 712274 . + . Parent=LTnewLM_180022400.1:pep;Name=PF03074;signature_desc=Glutamate-cysteine ligase;Ontology_term=GO:0004357,GO:0006750 ### LTnewLM_18 . pseudogene 716364 718079 2.44e+03 + . ID=LTnewLM_180022500:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.18.1670:mRNA 2 573;original_prot_length=574 LTnewLM_18 . pseudogenic_transcript 716364 718079 . + . ID=LTnewLM_180022500.1;Parent=LTnewLM_180022500:pseudogene LTnewLM_18 . pseudogenic_exon 716364 718079 . + . ID=LTnewLM_180022500.1:pseudogenic_exon:1;Parent=LTnewLM_180022500.1 ### LTnewLM_18 . polypeptide 716364 718079 . + . ID=LTnewLM_180022500.1:pep;Derives_from=LTnewLM_180022500.1;orthologous_to=LmjF.18.1670_mRNA;ortholog_cluster=OG0007490;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . contig 1 708414 . + . Name=LTnewLM_CTG000018 LTnewLM_19 AUGUSTUS gene 4692 5660 1 - . ID=LTnewLM_190005000 LTnewLM_19 AUGUSTUS mRNA 4692 5660 1 - . ID=LTnewLM_190005000.1;Parent=LTnewLM_190005000 LTnewLM_19 AUGUSTUS CDS 4692 5660 1 - 0 ID=LTnewLM_190005000.1:CDS:1;Parent=LTnewLM_190005000.1 ### LTnewLM_19 . polypeptide 4692 5660 . - . ID=LTnewLM_190005000.1:pep;Derives_from=LTnewLM_190005000.1;orthologous_to=LmjF.19.0010_mRNA;ortholog_cluster=OG0001716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 6855 7973 1 - . ID=LTnewLM_190005100 LTnewLM_19 AUGUSTUS mRNA 6855 7973 1 - . ID=LTnewLM_190005100.1;Parent=LTnewLM_190005100 LTnewLM_19 AUGUSTUS CDS 6855 7973 1 - 0 ID=LTnewLM_190005100.1:CDS:1;Parent=LTnewLM_190005100.1 ### LTnewLM_19 . polypeptide 6855 7973 . - . ID=LTnewLM_190005100.1:pep;Derives_from=LTnewLM_190005100.1;orthologous_to=LmjF.19.0020_mRNA;ortholog_cluster=OG0001717;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 8678 9001 1 - . ID=LTnewLM_190005200 LTnewLM_19 AUGUSTUS mRNA 8678 9001 1 - . ID=LTnewLM_190005200.1;Parent=LTnewLM_190005200 LTnewLM_19 AUGUSTUS CDS 8678 9001 1 - 0 ID=LTnewLM_190005200.1:CDS:1;Parent=LTnewLM_190005200.1 ### LTnewLM_19 . polypeptide 8678 9001 . - . ID=LTnewLM_190005200.1:pep;Derives_from=LTnewLM_190005200.1;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_19 Pfam protein_match 8753 8980 . - . Parent=LTnewLM_190005200.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_19 AUGUSTUS gene 9537 9860 1 - . ID=LTnewLM_190005300 LTnewLM_19 AUGUSTUS mRNA 9537 9860 1 - . ID=LTnewLM_190005300.1;Parent=LTnewLM_190005300 LTnewLM_19 AUGUSTUS CDS 9537 9860 1 - 0 ID=LTnewLM_190005300.1:CDS:1;Parent=LTnewLM_190005300.1 ### LTnewLM_19 . polypeptide 9537 9860 . - . ID=LTnewLM_190005300.1:pep;Derives_from=LTnewLM_190005300.1;orthologous_to=LTnewLM_190005400.1,LmjF.19.0030_mRNA,LmjF.19.0040_mRNA,LmjF.19.0050_mRNA;ortholog_cluster=OG0000083;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_19 Pfam protein_match 9612 9842 . - . Parent=LTnewLM_190005300.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_19 AUGUSTUS gene 10397 10720 1 - . ID=LTnewLM_190005400 LTnewLM_19 AUGUSTUS mRNA 10397 10720 1 - . ID=LTnewLM_190005400.1;Parent=LTnewLM_190005400 LTnewLM_19 AUGUSTUS CDS 10397 10720 1 - 0 ID=LTnewLM_190005400.1:CDS:1;Parent=LTnewLM_190005400.1 ### LTnewLM_19 . polypeptide 10397 10720 . - . ID=LTnewLM_190005400.1:pep;Derives_from=LTnewLM_190005400.1;orthologous_to=LTnewLM_190005300.1,LmjF.19.0030_mRNA,LmjF.19.0040_mRNA,LmjF.19.0050_mRNA;ortholog_cluster=OG0000083;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_19 Pfam protein_match 10472 10702 . - . Parent=LTnewLM_190005400.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_19 AUGUSTUS gene 11298 12095 1 - . ID=LTnewLM_190005500 LTnewLM_19 AUGUSTUS mRNA 11298 12095 1 - . ID=LTnewLM_190005500.1;Parent=LTnewLM_190005500 LTnewLM_19 AUGUSTUS CDS 11298 12095 1 - 0 ID=LTnewLM_190005500.1:CDS:1;Parent=LTnewLM_190005500.1 ### LTnewLM_19 . polypeptide 11298 12095 . - . ID=LTnewLM_190005500.1:pep;Derives_from=LTnewLM_190005500.1;orthologous_to=LTnewLM_320009800.1,LmjF.19.0060_mRNA,LmjF.32.0450_mRNA;ortholog_cluster=OG0000138;product=term%3DRibosomal protein S5%2C N-terminal domain/Ribosomal protein S5%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00333|Pfam:PF03719;Ontology_term=GO:0003723,GO:0006412,GO:0003735,GO:0005840 LTnewLM_19 Pfam protein_match 11367 11582 . - . Parent=LTnewLM_190005500.1:pep;Name=PF03719;signature_desc=Ribosomal protein S5%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_19 Pfam protein_match 11643 11834 . - . Parent=LTnewLM_190005500.1:pep;Name=PF00333;signature_desc=Ribosomal protein S5%2C N-terminal domain;Ontology_term=GO:0003723,GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_19 AUGUSTUS gene 13766 15046 1 - . ID=LTnewLM_190005600 LTnewLM_19 AUGUSTUS mRNA 13766 15046 1 - . ID=LTnewLM_190005600.1;Parent=LTnewLM_190005600 LTnewLM_19 AUGUSTUS CDS 13766 15046 1 - 0 ID=LTnewLM_190005600.1:CDS:1;Parent=LTnewLM_190005600.1 ### LTnewLM_19 . polypeptide 13766 15046 . - . ID=LTnewLM_190005600.1:pep;Derives_from=LTnewLM_190005600.1;orthologous_to=LmjF.19.0070_mRNA;ortholog_cluster=OG0001718;product=term%3DSH3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00018;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 13808 13969 . - . Parent=LTnewLM_190005600.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 16047 17345 1 - . ID=LTnewLM_190005700 LTnewLM_19 AUGUSTUS mRNA 16047 17345 1 - . ID=LTnewLM_190005700.1;Parent=LTnewLM_190005700 LTnewLM_19 AUGUSTUS CDS 16047 17345 1 - 0 ID=LTnewLM_190005700.1:CDS:1;Parent=LTnewLM_190005700.1 ### LTnewLM_19 . polypeptide 16047 17345 . - . ID=LTnewLM_190005700.1:pep;Derives_from=LTnewLM_190005700.1;orthologous_to=LmjF.19.0080_mRNA;ortholog_cluster=OG0001719;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_19 Pfam protein_match 17157 17333 . - . Parent=LTnewLM_190005700.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_19 AUGUSTUS gene 18184 19395 1 - . ID=LTnewLM_190005800 LTnewLM_19 AUGUSTUS mRNA 18184 19395 1 - . ID=LTnewLM_190005800.1;Parent=LTnewLM_190005800 LTnewLM_19 AUGUSTUS CDS 18184 19395 1 - 0 ID=LTnewLM_190005800.1:CDS:1;Parent=LTnewLM_190005800.1 ### LTnewLM_19 . polypeptide 18184 19395 . - . ID=LTnewLM_190005800.1:pep;Derives_from=LTnewLM_190005800.1;orthologous_to=LmjF.19.0090_mRNA;ortholog_cluster=OG0001720;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 21202 22101 1 - . ID=LTnewLM_190005900 LTnewLM_19 AUGUSTUS mRNA 21202 22101 1 - . ID=LTnewLM_190005900.1;Parent=LTnewLM_190005900 LTnewLM_19 AUGUSTUS CDS 21202 22101 1 - 0 ID=LTnewLM_190005900.1:CDS:1;Parent=LTnewLM_190005900.1 ### LTnewLM_19 . polypeptide 21202 22101 . - . ID=LTnewLM_190005900.1:pep;Derives_from=LTnewLM_190005900.1;orthologous_to=LmjF.19.0100_mRNA;ortholog_cluster=OG0001721;product=term%3DFibrillarin/tRNA methyltransferase complex GCD14 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01269|Pfam:PF08704;Ontology_term=GO:0006364,GO:0016429,GO:0003723,GO:0008033,GO:0031515,GO:0030488,GO:0008168 LTnewLM_19 Pfam protein_match 21226 21909 . - . Parent=LTnewLM_190005900.1:pep;Name=PF01269;signature_desc=Fibrillarin;Ontology_term=GO:0003723,GO:0008168,GO:0006364,GO:0008033 LTnewLM_19 Pfam protein_match 21352 21705 . - . Parent=LTnewLM_190005900.1:pep;Name=PF08704;signature_desc=tRNA methyltransferase complex GCD14 subunit;Ontology_term=GO:0016429,GO:0030488,GO:0031515 ### LTnewLM_19 AUGUSTUS gene 23465 24340 1 - . ID=LTnewLM_190006000 LTnewLM_19 AUGUSTUS mRNA 23465 24340 1 - . ID=LTnewLM_190006000.1;Parent=LTnewLM_190006000 LTnewLM_19 AUGUSTUS CDS 23465 24340 1 - 0 ID=LTnewLM_190006000.1:CDS:1;Parent=LTnewLM_190006000.1 ### LTnewLM_19 . polypeptide 23465 24340 . - . ID=LTnewLM_190006000.1:pep;Derives_from=LTnewLM_190006000.1;orthologous_to=LmjF.19.0110_mRNA;ortholog_cluster=OG0001722;product=term%3DClathrin light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01086;Ontology_term=GO:0005198,GO:0030132,GO:0030130,GO:0016192,GO:0006886 LTnewLM_19 Pfam protein_match 23486 23767 . - . Parent=LTnewLM_190006000.1:pep;Name=PF01086;signature_desc=Clathrin light chain;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030130,GO:0030132 ### LTnewLM_19 AUGUSTUS gene 25361 26050 1 - . ID=LTnewLM_190006100 LTnewLM_19 AUGUSTUS mRNA 25361 26050 1 - . ID=LTnewLM_190006100.1;Parent=LTnewLM_190006100 LTnewLM_19 AUGUSTUS CDS 25361 26050 1 - 0 ID=LTnewLM_190006100.1:CDS:1;Parent=LTnewLM_190006100.1 ### LTnewLM_19 . polypeptide 25361 26050 . - . ID=LTnewLM_190006100.1:pep;Derives_from=LTnewLM_190006100.1;orthologous_to=LmjF.19.0120_mRNA;ortholog_cluster=OG0001723;product=term%3DSNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05739;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 25391 25540 . - . Parent=LTnewLM_190006100.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 27061 27822 1 - . ID=LTnewLM_190006200 LTnewLM_19 AUGUSTUS mRNA 27061 27822 1 - . ID=LTnewLM_190006200.1;Parent=LTnewLM_190006200 LTnewLM_19 AUGUSTUS CDS 27061 27822 1 - 0 ID=LTnewLM_190006200.1:CDS:1;Parent=LTnewLM_190006200.1 ### LTnewLM_19 . polypeptide 27061 27822 . - . ID=LTnewLM_190006200.1:pep;Derives_from=LTnewLM_190006200.1;orthologous_to=LmjF.19.0130_mRNA;ortholog_cluster=OG0001724;product=term%3DDer1-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04511 LTnewLM_19 Pfam protein_match 27232 27783 . - . Parent=LTnewLM_190006200.1:pep;Name=PF04511;signature_desc=Der1-like family ### LTnewLM_19 AUGUSTUS gene 28961 30856 1 - . ID=LTnewLM_190006300 LTnewLM_19 AUGUSTUS mRNA 28961 30856 1 - . ID=LTnewLM_190006300.1;Parent=LTnewLM_190006300 LTnewLM_19 AUGUSTUS CDS 28961 30856 1 - 0 ID=LTnewLM_190006300.1:CDS:1;Parent=LTnewLM_190006300.1 ### LTnewLM_19 . polypeptide 28961 30856 . - . ID=LTnewLM_190006300.1:pep;Derives_from=LTnewLM_190006300.1;orthologous_to=LmjF.19.0140_mRNA;ortholog_cluster=OG0001725;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/CAP-Gly domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF01302;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_19 Pfam protein_match 28979 29173 . - . Parent=LTnewLM_190006300.1:pep;Name=PF01302;signature_desc=CAP-Gly domain LTnewLM_19 Pfam protein_match 29876 30781 . - . Parent=LTnewLM_190006300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 30296 30778 . - . Parent=LTnewLM_190006300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 33309 34151 1 - . ID=LTnewLM_190006400 LTnewLM_19 AUGUSTUS mRNA 33309 34151 1 - . ID=LTnewLM_190006400.1;Parent=LTnewLM_190006400 LTnewLM_19 AUGUSTUS CDS 33309 34151 1 - 0 ID=LTnewLM_190006400.1:CDS:1;Parent=LTnewLM_190006400.1 ### LTnewLM_19 . polypeptide 33309 34151 . - . ID=LTnewLM_190006400.1:pep;Derives_from=LTnewLM_190006400.1;orthologous_to=LmjF.19.0150_mRNA;ortholog_cluster=OG0001726;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 33321 34112 . - . Parent=LTnewLM_190006400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 33333 34115 . - . Parent=LTnewLM_190006400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 36421 37563 1 - . ID=LTnewLM_190006500 LTnewLM_19 AUGUSTUS mRNA 36421 37563 1 - . ID=LTnewLM_190006500.1;Parent=LTnewLM_190006500 LTnewLM_19 AUGUSTUS CDS 36421 37563 1 - 0 ID=LTnewLM_190006500.1:CDS:1;Parent=LTnewLM_190006500.1 ### LTnewLM_19 . polypeptide 36421 37563 . - . ID=LTnewLM_190006500.1:pep;Derives_from=LTnewLM_190006500.1;orthologous_to=LmjF.19.0160_mRNA;ortholog_cluster=OG0001727;product=term%3DMetallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00557 LTnewLM_19 Pfam protein_match 36850 37455 . - . Parent=LTnewLM_190006500.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_19 AUGUSTUS gene 39094 43569 1 - . ID=LTnewLM_190006600 LTnewLM_19 AUGUSTUS mRNA 39094 43569 1 - . ID=LTnewLM_190006600.1;Parent=LTnewLM_190006600 LTnewLM_19 AUGUSTUS CDS 39094 43569 1 - 0 ID=LTnewLM_190006600.1:CDS:1;Parent=LTnewLM_190006600.1 ### LTnewLM_19 . polypeptide 39094 43569 . - . ID=LTnewLM_190006600.1:pep;Derives_from=LTnewLM_190006600.1;orthologous_to=LmjF.19.0170_mRNA;ortholog_cluster=OG0001728;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 48341 49561 1 - . ID=LTnewLM_190006700 LTnewLM_19 AUGUSTUS mRNA 48341 49561 1 - . ID=LTnewLM_190006700.1;Parent=LTnewLM_190006700 LTnewLM_19 AUGUSTUS CDS 48341 49561 1 - 0 ID=LTnewLM_190006700.1:CDS:1;Parent=LTnewLM_190006700.1 ### LTnewLM_19 . polypeptide 48341 49561 . - . ID=LTnewLM_190006700.1:pep;Derives_from=LTnewLM_190006700.1;orthologous_to=LmjF.19.0180_mRNA;ortholog_cluster=OG0001729;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_19 Pfam protein_match 48698 49552 . - . Parent=LTnewLM_190006700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 48878 49543 . - . Parent=LTnewLM_190006700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 51490 51981 1 - . ID=LTnewLM_190006800 LTnewLM_19 AUGUSTUS mRNA 51490 51981 1 - . ID=LTnewLM_190006800.1;Parent=LTnewLM_190006800 LTnewLM_19 AUGUSTUS CDS 51490 51981 1 - 0 ID=LTnewLM_190006800.1:CDS:1;Parent=LTnewLM_190006800.1 ### LTnewLM_19 . polypeptide 51490 51981 . - . ID=LTnewLM_190006800.1:pep;Derives_from=LTnewLM_190006800.1;orthologous_to=LmjF.19.0190_mRNA;ortholog_cluster=OG0001730;product=term%3DMultiprotein bridging factor 1/Helix-turn-helix%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08523|Pfam:PF01381;Ontology_term=GO:0043565 LTnewLM_19 Pfam protein_match 51553 51708 . - . Parent=LTnewLM_190006800.1:pep;Name=PF01381;signature_desc=Helix-turn-helix;Ontology_term=GO:0043565 LTnewLM_19 Pfam protein_match 51733 51954 . - . Parent=LTnewLM_190006800.1:pep;Name=PF08523;signature_desc=Multiprotein bridging factor 1 ### LTnewLM_19 AUGUSTUS gene 54890 55843 1 - . ID=LTnewLM_190006900 LTnewLM_19 AUGUSTUS mRNA 54890 55843 1 - . ID=LTnewLM_190006900.1;Parent=LTnewLM_190006900 LTnewLM_19 AUGUSTUS CDS 54890 55843 1 - 0 ID=LTnewLM_190006900.1:CDS:1;Parent=LTnewLM_190006900.1 ### LTnewLM_19 . polypeptide 54890 55843 . - . ID=LTnewLM_190006900.1:pep;Derives_from=LTnewLM_190006900.1;orthologous_to=LTnewLM_190007000.1,LmjF.19.0200_mRNA,LmjF.19.0210_mRNA;ortholog_cluster=OG0000139;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_19 Pfam protein_match 54920 55177 . - . Parent=LTnewLM_190006900.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 55190 55465 . - . Parent=LTnewLM_190006900.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 55493 55786 . - . Parent=LTnewLM_190006900.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_19 AUGUSTUS gene 60296 61249 1 - . ID=LTnewLM_190007000 LTnewLM_19 AUGUSTUS mRNA 60296 61249 1 - . ID=LTnewLM_190007000.1;Parent=LTnewLM_190007000 LTnewLM_19 AUGUSTUS CDS 60296 61249 1 - 0 ID=LTnewLM_190007000.1:CDS:1;Parent=LTnewLM_190007000.1 ### LTnewLM_19 . polypeptide 60296 61249 . - . ID=LTnewLM_190007000.1:pep;Derives_from=LTnewLM_190007000.1;orthologous_to=LTnewLM_190006900.1,LmjF.19.0200_mRNA,LmjF.19.0210_mRNA;ortholog_cluster=OG0000139;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_19 Pfam protein_match 60326 60583 . - . Parent=LTnewLM_190007000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 60593 60871 . - . Parent=LTnewLM_190007000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 60899 61192 . - . Parent=LTnewLM_190007000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_19 AUGUSTUS gene 62645 64873 1 - . ID=LTnewLM_190007100 LTnewLM_19 AUGUSTUS mRNA 62645 64873 1 - . ID=LTnewLM_190007100.1;Parent=LTnewLM_190007100 LTnewLM_19 AUGUSTUS CDS 62645 64873 1 - 0 ID=LTnewLM_190007100.1:CDS:1;Parent=LTnewLM_190007100.1 ### LTnewLM_19 . polypeptide 62645 64873 . - . ID=LTnewLM_190007100.1:pep;Derives_from=LTnewLM_190007100.1;orthologous_to=LmjF.19.0220_mRNA;ortholog_cluster=OG0001731;product=term%3DCrtC N-terminal lipocalin domain/Lipocalin-like domain/Polyprenyl synthetase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07143|Pfam:PF17186|Pfam:PF00348;Ontology_term=GO:0016491,GO:0015995,GO:0055114,GO:0016117,GO:0008299,GO:0015979 LTnewLM_19 Pfam protein_match 62801 63574 . - . Parent=LTnewLM_190007100.1:pep;Name=PF00348;signature_desc=Polyprenyl synthetase;Ontology_term=GO:0008299 LTnewLM_19 Pfam protein_match 63758 64135 . - . Parent=LTnewLM_190007100.1:pep;Name=PF17186;signature_desc=Lipocalin-like domain LTnewLM_19 Pfam protein_match 64169 64783 . - . Parent=LTnewLM_190007100.1:pep;Name=PF07143;signature_desc=CrtC N-terminal lipocalin domain;Ontology_term=GO:0016491,GO:0015979,GO:0015995,GO:0016117,GO:0055114 ### LTnewLM_19 AUGUSTUS gene 72312 74387 1 + . ID=LTnewLM_190007200 LTnewLM_19 AUGUSTUS mRNA 72312 74387 1 + . ID=LTnewLM_190007200.1;Parent=LTnewLM_190007200 LTnewLM_19 AUGUSTUS CDS 72312 74387 1 + 0 ID=LTnewLM_190007200.1:CDS:1;Parent=LTnewLM_190007200.1 ### LTnewLM_19 . polypeptide 72312 74387 . + . ID=LTnewLM_190007200.1:pep;Derives_from=LTnewLM_190007200.1;orthologous_to=LmjF.19.0230_mRNA;ortholog_cluster=OG0001732;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_19 Pfam protein_match 72816 72995 . + . Parent=LTnewLM_190007200.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_19 AUGUSTUS gene 76051 78069 1 + . ID=LTnewLM_190007300 LTnewLM_19 AUGUSTUS mRNA 76051 78069 1 + . ID=LTnewLM_190007300.1;Parent=LTnewLM_190007300 LTnewLM_19 AUGUSTUS CDS 76051 78069 1 + 0 ID=LTnewLM_190007300.1:CDS:1;Parent=LTnewLM_190007300.1 ### LTnewLM_19 . polypeptide 76051 78069 . + . ID=LTnewLM_190007300.1:pep;Derives_from=LTnewLM_190007300.1;orthologous_to=LmjF.19.0240_mRNA;ortholog_cluster=OG0001733;product=term%3DGNL3L/Grn1 putative GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08701 LTnewLM_19 Pfam protein_match 76093 76332 . + . Parent=LTnewLM_190007300.1:pep;Name=PF08701;signature_desc=GNL3L/Grn1 putative GTPase ### LTnewLM_19 AUGUSTUS gene 79788 82415 1 + . ID=LTnewLM_190007400 LTnewLM_19 AUGUSTUS mRNA 79788 82415 1 + . ID=LTnewLM_190007400.1;Parent=LTnewLM_190007400 LTnewLM_19 AUGUSTUS CDS 79788 82415 1 + 0 ID=LTnewLM_190007400.1:CDS:1;Parent=LTnewLM_190007400.1 ### LTnewLM_19 . polypeptide 79788 82415 . + . ID=LTnewLM_190007400.1:pep;Derives_from=LTnewLM_190007400.1;orthologous_to=LmjF.19.0250_mRNA;ortholog_cluster=OG0001734;product=term%3DUvrB/uvrC motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02151;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 80433 80528 . + . Parent=LTnewLM_190007400.1:pep;Name=PF02151;signature_desc=UvrB/uvrC motif;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 84859 87387 1 + . ID=LTnewLM_190007500 LTnewLM_19 AUGUSTUS mRNA 84859 87387 1 + . ID=LTnewLM_190007500.1;Parent=LTnewLM_190007500 LTnewLM_19 AUGUSTUS CDS 84859 87387 1 + 0 ID=LTnewLM_190007500.1:CDS:1;Parent=LTnewLM_190007500.1 ### LTnewLM_19 . polypeptide 84859 87387 . + . ID=LTnewLM_190007500.1:pep;Derives_from=LTnewLM_190007500.1;orthologous_to=LmjF.19.0260_mRNA;ortholog_cluster=OG0001735;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_19 Pfam protein_match 86311 86787 . + . Parent=LTnewLM_190007500.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_19 Pfam protein_match 86386 87333 . + . Parent=LTnewLM_190007500.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_19 AUGUSTUS gene 95043 97925 1 + . ID=LTnewLM_190007600 LTnewLM_19 AUGUSTUS mRNA 95043 97925 1 + . ID=LTnewLM_190007600.1;Parent=LTnewLM_190007600 LTnewLM_19 AUGUSTUS CDS 95043 97925 1 + 0 ID=LTnewLM_190007600.1:CDS:1;Parent=LTnewLM_190007600.1 ### LTnewLM_19 . polypeptide 95043 97925 . + . ID=LTnewLM_190007600.1:pep;Derives_from=LTnewLM_190007600.1;orthologous_to=LmjF.19.0270_mRNA;ortholog_cluster=OG0001736;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 101342 103237 1 + . ID=LTnewLM_190007700 LTnewLM_19 AUGUSTUS mRNA 101342 103237 1 + . ID=LTnewLM_190007700.1;Parent=LTnewLM_190007700 LTnewLM_19 AUGUSTUS CDS 101342 103237 1 + 0 ID=LTnewLM_190007700.1:CDS:1;Parent=LTnewLM_190007700.1 ### LTnewLM_19 . polypeptide 101342 103237 . + . ID=LTnewLM_190007700.1:pep;Derives_from=LTnewLM_190007700.1;orthologous_to=LmjF.19.0280_mRNA;ortholog_cluster=OG0001737;product=term%3DN-terminal EH-domain containing protein/Dynamin family/50S ribosome-binding GTPase/Domain of unknown function (DUF5600)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16880|Pfam:PF00350|Pfam:PF01926|Pfam:PF18150;Ontology_term=GO:0005525 LTnewLM_19 Pfam protein_match 101435 101515 . + . Parent=LTnewLM_190007700.1:pep;Name=PF16880;signature_desc=N-terminal EH-domain containing protein LTnewLM_19 Pfam protein_match 101543 101932 . + . Parent=LTnewLM_190007700.1:pep;Name=PF00350;signature_desc=Dynamin family LTnewLM_19 Pfam protein_match 101543 101944 . + . Parent=LTnewLM_190007700.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_19 Pfam protein_match 102236 102529 . + . Parent=LTnewLM_190007700.1:pep;Name=PF18150;signature_desc=Domain of unknown function (DUF5600) ### LTnewLM_19 AUGUSTUS gene 104691 109226 1.83 + . ID=LTnewLM_190007800 LTnewLM_19 AUGUSTUS mRNA 104691 109226 1 + . ID=LTnewLM_190007800.1;Parent=LTnewLM_190007800 LTnewLM_19 AUGUSTUS CDS 104691 109226 1 + 0 ID=LTnewLM_190007800.1:CDS:1;Parent=LTnewLM_190007800.1 LTnewLM_19 AUGUSTUS mRNA 105129 109226 0.83 + . ID=LTnewLM_190007800.2;Parent=LTnewLM_190007800 LTnewLM_19 AUGUSTUS CDS 105129 109226 0.83 + 0 ID=LTnewLM_190007800.2:CDS:1;Parent=LTnewLM_190007800.2 ### LTnewLM_19 . polypeptide 104691 109226 . + . ID=LTnewLM_190007800.1:pep;Derives_from=LTnewLM_190007800.1;orthologous_to=LTnewLM_190007800.2,LmjF.19.0290_mRNA;ortholog_cluster=OG0000364;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . polypeptide 105129 109226 . + . ID=LTnewLM_190007800.2:pep;Derives_from=LTnewLM_190007800.2;orthologous_to=LTnewLM_190007800.1,LmjF.19.0290_mRNA;ortholog_cluster=OG0000364;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 Liftoff gene 110916 111860 . + . ID=LTnewLM_190007900;coverage=1.0;sequence_ID=0.961;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.0300_0 LTnewLM_19 Liftoff mRNA 110916 111860 . + . ID=LTnewLM_190007900.1;Parent=LTnewLM_190007900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 Liftoff CDS 110916 111860 . + 0 ID=LTnewLM_190007900.1:CDS:1;Parent=LTnewLM_190007900.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 110916 111860 . + . ID=LTnewLM_190007900.1:pep;Derives_from=LTnewLM_190007900.1;orthologous_to=LTnewLM_190008000.1,LmjF.19.0300_mRNA;ortholog_cluster=OG0000365;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 116351 117529 1 + . ID=LTnewLM_190008000 LTnewLM_19 AUGUSTUS mRNA 116351 117529 1 + . ID=LTnewLM_190008000.1;Parent=LTnewLM_190008000 LTnewLM_19 AUGUSTUS CDS 116351 117529 1 + 0 ID=LTnewLM_190008000.1:CDS:1;Parent=LTnewLM_190008000.1 ### LTnewLM_19 . polypeptide 116351 117529 . + . ID=LTnewLM_190008000.1:pep;Derives_from=LTnewLM_190008000.1;orthologous_to=LTnewLM_190007900.1,LmjF.19.0300_mRNA;ortholog_cluster=OG0000365;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 120542 121300 1 + . ID=LTnewLM_190008100 LTnewLM_19 AUGUSTUS mRNA 120542 121300 1 + . ID=LTnewLM_190008100.1;Parent=LTnewLM_190008100 LTnewLM_19 AUGUSTUS CDS 120542 121300 1 + 0 ID=LTnewLM_190008100.1:CDS:1;Parent=LTnewLM_190008100.1 ### LTnewLM_19 . polypeptide 120542 121300 . + . ID=LTnewLM_190008100.1:pep;Derives_from=LTnewLM_190008100.1;orthologous_to=LmjF.19.0310_mRNA;ortholog_cluster=OG0001738;product=term%3DUncharacterized protein family UPF0016%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01169;Ontology_term=GO:0016020 LTnewLM_19 Pfam protein_match 120581 120802 . + . Parent=LTnewLM_190008100.1:pep;Name=PF01169;signature_desc=Uncharacterized protein family UPF0016;Ontology_term=GO:0016020 LTnewLM_19 Pfam protein_match 121001 121219 . + . Parent=LTnewLM_190008100.1:pep;Name=PF01169;signature_desc=Uncharacterized protein family UPF0016;Ontology_term=GO:0016020 ### LTnewLM_19 AUGUSTUS gene 123808 125832 1 + . ID=LTnewLM_190008200 LTnewLM_19 AUGUSTUS mRNA 123808 125832 1 + . ID=LTnewLM_190008200.1;Parent=LTnewLM_190008200 LTnewLM_19 AUGUSTUS CDS 123808 125832 1 + 0 ID=LTnewLM_190008200.1:CDS:1;Parent=LTnewLM_190008200.1 ### LTnewLM_19 . polypeptide 123808 125832 . + . ID=LTnewLM_190008200.1:pep;Derives_from=LTnewLM_190008200.1;orthologous_to=LmjF.19.0320_mRNA;ortholog_cluster=OG0001739;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 127366 129720 1 + . ID=LTnewLM_190008300 LTnewLM_19 AUGUSTUS mRNA 127366 129720 1 + . ID=LTnewLM_190008300.1;Parent=LTnewLM_190008300 LTnewLM_19 AUGUSTUS CDS 127366 129720 1 + 0 ID=LTnewLM_190008300.1:CDS:1;Parent=LTnewLM_190008300.1 ### LTnewLM_19 . polypeptide 127366 129720 . + . ID=LTnewLM_190008300.1:pep;Derives_from=LTnewLM_190008300.1;orthologous_to=LmjF.19.0330_mRNA;ortholog_cluster=OG0001740;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 127681 127785 . + . Parent=LTnewLM_190008300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 127942 128049 . + . Parent=LTnewLM_190008300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 131135 132511 1 + . ID=LTnewLM_190008400 LTnewLM_19 AUGUSTUS mRNA 131135 132511 1 + . ID=LTnewLM_190008400.1;Parent=LTnewLM_190008400 LTnewLM_19 AUGUSTUS CDS 131135 132511 1 + 0 ID=LTnewLM_190008400.1:CDS:1;Parent=LTnewLM_190008400.1 ### LTnewLM_19 . polypeptide 131135 132511 . + . ID=LTnewLM_190008400.1:pep;Derives_from=LTnewLM_190008400.1;orthologous_to=LmjF.19.0340_mRNA;ortholog_cluster=OG0001741;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 134689 135951 1 + . ID=LTnewLM_190008500 LTnewLM_19 AUGUSTUS mRNA 134689 135951 1 + . ID=LTnewLM_190008500.1;Parent=LTnewLM_190008500 LTnewLM_19 AUGUSTUS CDS 134689 135951 1 + 0 ID=LTnewLM_190008500.1:CDS:1;Parent=LTnewLM_190008500.1 ### LTnewLM_19 . polypeptide 134689 135951 . + . ID=LTnewLM_190008500.1:pep;Derives_from=LTnewLM_190008500.1;orthologous_to=LmjF.19.0350_mRNA;ortholog_cluster=OG0001742;product=term%3DN-terminal domain of lipoyl synthase of Radical_SAM family/Radical SAM superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16881|Pfam:PF04055;Ontology_term=GO:0003824,GO:0051536 LTnewLM_19 Pfam protein_match 134986 135105 . + . Parent=LTnewLM_190008500.1:pep;Name=PF16881;signature_desc=N-terminal domain of lipoyl synthase of Radical_SAM family LTnewLM_19 Pfam protein_match 135172 135666 . + . Parent=LTnewLM_190008500.1:pep;Name=PF04055;signature_desc=Radical SAM superfamily;Ontology_term=GO:0003824,GO:0051536 ### LTnewLM_19 AUGUSTUS gene 138807 144305 1 + . ID=LTnewLM_190008600 LTnewLM_19 AUGUSTUS mRNA 138807 144305 1 + . ID=LTnewLM_190008600.1;Parent=LTnewLM_190008600 LTnewLM_19 AUGUSTUS CDS 138807 144305 1 + 0 ID=LTnewLM_190008600.1:CDS:1;Parent=LTnewLM_190008600.1 ### LTnewLM_19 . polypeptide 138807 144305 . + . ID=LTnewLM_190008600.1:pep;Derives_from=LTnewLM_190008600.1;orthologous_to=LmjF.19.0360_mRNA;ortholog_cluster=OG0001743;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_19 Pfam protein_match 142680 142901 . + . Parent=LTnewLM_190008600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 143538 144260 . + . Parent=LTnewLM_190008600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 150094 153552 1 + . ID=LTnewLM_190008700 LTnewLM_19 AUGUSTUS mRNA 150094 153552 1 + . ID=LTnewLM_190008700.1;Parent=LTnewLM_190008700 LTnewLM_19 AUGUSTUS CDS 150094 153552 1 + 0 ID=LTnewLM_190008700.1:CDS:1;Parent=LTnewLM_190008700.1 ### LTnewLM_19 . polypeptide 150094 153552 . + . ID=LTnewLM_190008700.1:pep;Derives_from=LTnewLM_190008700.1;orthologous_to=LmjF.19.0370_mRNA;ortholog_cluster=OG0001744;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 Liftoff gene 157100 163591 . + . ID=LTnewLM_190008800;coverage=0.993;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.19.0380_0 LTnewLM_19 Liftoff mRNA 157100 163591 . + . ID=LTnewLM_190008800.1;Parent=LTnewLM_190008800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_19 Liftoff CDS 157100 163591 . + 0 ID=LTnewLM_190008800.1:CDS:1;Parent=LTnewLM_190008800.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 157100 163591 . + . ID=LTnewLM_190008800.1:pep;Derives_from=LTnewLM_190008800.1;orthologous_to=LmjF.19.0380_mRNA;ortholog_cluster=OG0001745;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 158753 158860 . + . Parent=LTnewLM_190008800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 164512 164967 1 + . ID=LTnewLM_190008900 LTnewLM_19 AUGUSTUS mRNA 164512 164967 1 + . ID=LTnewLM_190008900.1;Parent=LTnewLM_190008900 LTnewLM_19 AUGUSTUS CDS 164512 164967 1 + 0 ID=LTnewLM_190008900.1:CDS:1;Parent=LTnewLM_190008900.1 ### LTnewLM_19 . polypeptide 164512 164967 . + . ID=LTnewLM_190008900.1:pep;Derives_from=LTnewLM_190008900.1;orthologous_to=LTnewLM_330041700.1,LmjF.19.0390_mRNA,LmjF.33.3150_mRNA;ortholog_cluster=OG0000140;product=term%3DRibosomal S13/S15 N-terminal domain/Ribosomal protein S15%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08069|Pfam:PF00312;Ontology_term=GO:0005622,GO:0006412,GO:0003735,GO:0005840 LTnewLM_19 Pfam protein_match 164512 164688 . + . Parent=LTnewLM_190008900.1:pep;Name=PF08069;signature_desc=Ribosomal S13/S15 N-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_19 Pfam protein_match 164734 164946 . + . Parent=LTnewLM_190008900.1:pep;Name=PF00312;signature_desc=Ribosomal protein S15;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_19 AUGUSTUS gene 166635 167477 1 + . ID=LTnewLM_190009000 LTnewLM_19 AUGUSTUS mRNA 166635 167477 1 + . ID=LTnewLM_190009000.1;Parent=LTnewLM_190009000 LTnewLM_19 AUGUSTUS CDS 166635 167477 1 + 0 ID=LTnewLM_190009000.1:CDS:1;Parent=LTnewLM_190009000.1 ### LTnewLM_19 . polypeptide 166635 167477 . + . ID=LTnewLM_190009000.1:pep;Derives_from=LTnewLM_190009000.1;orthologous_to=LmjF.19.0400_mRNA;ortholog_cluster=OG0001746;product=term%3DSynaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_19 Pfam protein_match 167232 167468 . + . Parent=LTnewLM_190009000.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_19 AUGUSTUS gene 168714 169088 1 + . ID=LTnewLM_190009100 LTnewLM_19 AUGUSTUS mRNA 168714 169088 1 + . ID=LTnewLM_190009100.1;Parent=LTnewLM_190009100 LTnewLM_19 AUGUSTUS CDS 168714 169088 1 + 0 ID=LTnewLM_190009100.1:CDS:1;Parent=LTnewLM_190009100.1 ### LTnewLM_19 . polypeptide 168714 169088 . + . ID=LTnewLM_190009100.1:pep;Derives_from=LTnewLM_190009100.1;orthologous_to=LmjF.19.0410_mRNA;ortholog_cluster=OG0001747;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 170544 170999 1 + . ID=LTnewLM_190009200 LTnewLM_19 AUGUSTUS mRNA 170544 170999 1 + . ID=LTnewLM_190009200.1;Parent=LTnewLM_190009200 LTnewLM_19 AUGUSTUS CDS 170544 170999 1 + 0 ID=LTnewLM_190009200.1:CDS:1;Parent=LTnewLM_190009200.1 ### LTnewLM_19 . polypeptide 170544 170999 . + . ID=LTnewLM_190009200.1:pep;Derives_from=LTnewLM_190009200.1;orthologous_to=LmjF.19.0420_mRNA;ortholog_cluster=OG0001748;product=term%3DTranscription factor S-II (TFIIS)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01096;Ontology_term=GO:0006351,GO:0008270,GO:0003676 LTnewLM_19 Pfam protein_match 170865 170987 . + . Parent=LTnewLM_190009200.1:pep;Name=PF01096;signature_desc=Transcription factor S-II (TFIIS);Ontology_term=GO:0003676,GO:0008270,GO:0006351 ### LTnewLM_19 AUGUSTUS gene 171679 175485 1 + . ID=LTnewLM_190009300 LTnewLM_19 AUGUSTUS mRNA 171679 175485 1 + . ID=LTnewLM_190009300.1;Parent=LTnewLM_190009300 LTnewLM_19 AUGUSTUS CDS 171679 175485 1 + 0 ID=LTnewLM_190009300.1:CDS:1;Parent=LTnewLM_190009300.1 ### LTnewLM_19 . polypeptide 171679 175485 . + . ID=LTnewLM_190009300.1:pep;Derives_from=LTnewLM_190009300.1;orthologous_to=LmjF.19.0430_mRNA;ortholog_cluster=OG0001749;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 176247 177299 1 + . ID=LTnewLM_190009400 LTnewLM_19 AUGUSTUS mRNA 176247 177299 1 + . ID=LTnewLM_190009400.1;Parent=LTnewLM_190009400 LTnewLM_19 AUGUSTUS CDS 176247 177299 1 + 0 ID=LTnewLM_190009400.1:CDS:1;Parent=LTnewLM_190009400.1 ### LTnewLM_19 . polypeptide 176247 177299 . + . ID=LTnewLM_190009400.1:pep;Derives_from=LTnewLM_190009400.1;orthologous_to=LmjF.19.0440_mRNA;ortholog_cluster=OG0001750;product=term%3DNucleosome assembly protein (NAP)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00956;Ontology_term=GO:0005634,GO:0006334 LTnewLM_19 Pfam protein_match 176403 177158 . + . Parent=LTnewLM_190009400.1:pep;Name=PF00956;signature_desc=Nucleosome assembly protein (NAP);Ontology_term=GO:0006334,GO:0005634 ### LTnewLM_19 AUGUSTUS gene 178933 181782 1 + . ID=LTnewLM_190009500 LTnewLM_19 AUGUSTUS mRNA 178933 181782 1 + . ID=LTnewLM_190009500.1;Parent=LTnewLM_190009500 LTnewLM_19 AUGUSTUS CDS 178933 181782 1 + 0 ID=LTnewLM_190009500.1:CDS:1;Parent=LTnewLM_190009500.1 ### LTnewLM_19 . polypeptide 178933 181782 . + . ID=LTnewLM_190009500.1:pep;Derives_from=LTnewLM_190009500.1;orthologous_to=LmjF.19.0450_mRNA;ortholog_cluster=OG0001751;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 183740 184627 1 + . ID=LTnewLM_190009600 LTnewLM_19 AUGUSTUS mRNA 183740 184627 1 + . ID=LTnewLM_190009600.1;Parent=LTnewLM_190009600 LTnewLM_19 AUGUSTUS CDS 183740 184627 1 + 0 ID=LTnewLM_190009600.1:CDS:1;Parent=LTnewLM_190009600.1 ### LTnewLM_19 . polypeptide 183740 184627 . + . ID=LTnewLM_190009600.1:pep;Derives_from=LTnewLM_190009600.1;orthologous_to=LmjF.19.0460_mRNA;ortholog_cluster=OG0001752;product=term%3DSubunit CCDC53 of WASH complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10152;Ontology_term=GO:0071203 LTnewLM_19 Pfam protein_match 183845 184555 . + . Parent=LTnewLM_190009600.1:pep;Name=PF10152;signature_desc=Subunit CCDC53 of WASH complex;Ontology_term=GO:0071203 ### LTnewLM_19 AUGUSTUS gene 185284 186363 1 + . ID=LTnewLM_190009700 LTnewLM_19 AUGUSTUS mRNA 185284 186363 1 + . ID=LTnewLM_190009700.1;Parent=LTnewLM_190009700 LTnewLM_19 AUGUSTUS CDS 185284 186363 1 + 0 ID=LTnewLM_190009700.1:CDS:1;Parent=LTnewLM_190009700.1 ### LTnewLM_19 . polypeptide 185284 186363 . + . ID=LTnewLM_190009700.1:pep;Derives_from=LTnewLM_190009700.1;orthologous_to=LmjF.19.0470_mRNA;ortholog_cluster=OG0001753;product=term%3DNuclear cap binding complex subunit CBP30%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19041 LTnewLM_19 Pfam protein_match 185323 186357 . + . Parent=LTnewLM_190009700.1:pep;Name=PF19041;signature_desc=Nuclear cap binding complex subunit CBP30 ### LTnewLM_19 AUGUSTUS gene 187632 188402 1 + . ID=LTnewLM_190009800 LTnewLM_19 AUGUSTUS mRNA 187632 188402 1 + . ID=LTnewLM_190009800.1;Parent=LTnewLM_190009800 LTnewLM_19 AUGUSTUS CDS 187632 188402 1 + 0 ID=LTnewLM_190009800.1:CDS:1;Parent=LTnewLM_190009800.1 ### LTnewLM_19 . polypeptide 187632 188402 . + . ID=LTnewLM_190009800.1:pep;Derives_from=LTnewLM_190009800.1;orthologous_to=LmjF.19.0480_mRNA;ortholog_cluster=OG0001754;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 192648 193286 1 + . ID=LTnewLM_190009900 LTnewLM_19 AUGUSTUS mRNA 192648 193286 1 + . ID=LTnewLM_190009900.1;Parent=LTnewLM_190009900 LTnewLM_19 AUGUSTUS CDS 192648 193286 1 + 0 ID=LTnewLM_190009900.1:CDS:1;Parent=LTnewLM_190009900.1 ### LTnewLM_19 . polypeptide 192648 193286 . + . ID=LTnewLM_190009900.1:pep;Derives_from=LTnewLM_190009900.1;orthologous_to=LmjF.19.0490_mRNA;ortholog_cluster=OG0001755;product=term%3DFamily of unknown function (DUF6787)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20584 LTnewLM_19 Pfam protein_match 192975 193229 . + . Parent=LTnewLM_190009900.1:pep;Name=PF20584;signature_desc=Family of unknown function (DUF6787) ### LTnewLM_19 AUGUSTUS gene 194450 195349 1 + . ID=LTnewLM_190010000 LTnewLM_19 AUGUSTUS mRNA 194450 195349 1 + . ID=LTnewLM_190010000.1;Parent=LTnewLM_190010000 LTnewLM_19 AUGUSTUS CDS 194450 195349 1 + 0 ID=LTnewLM_190010000.1:CDS:1;Parent=LTnewLM_190010000.1 ### LTnewLM_19 . polypeptide 194450 195349 . + . ID=LTnewLM_190010000.1:pep;Derives_from=LTnewLM_190010000.1;orthologous_to=LmjF.19.0500_mRNA;ortholog_cluster=OG0001756;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 196680 201497 1 + . ID=LTnewLM_190010100 LTnewLM_19 AUGUSTUS mRNA 196680 201497 1 + . ID=LTnewLM_190010100.1;Parent=LTnewLM_190010100 LTnewLM_19 AUGUSTUS CDS 196680 201497 1 + 0 ID=LTnewLM_190010100.1:CDS:1;Parent=LTnewLM_190010100.1 ### LTnewLM_19 . polypeptide 196680 201497 . + . ID=LTnewLM_190010100.1:pep;Derives_from=LTnewLM_190010100.1;orthologous_to=LmjF.19.0510_mRNA;ortholog_cluster=OG0001757;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 201975 203684 1 + . ID=LTnewLM_190010200 LTnewLM_19 AUGUSTUS mRNA 201975 203684 1 + . ID=LTnewLM_190010200.1;Parent=LTnewLM_190010200 LTnewLM_19 AUGUSTUS CDS 201975 203684 1 + 0 ID=LTnewLM_190010200.1:CDS:1;Parent=LTnewLM_190010200.1 ### LTnewLM_19 . polypeptide 201975 203684 . + . ID=LTnewLM_190010200.1:pep;Derives_from=LTnewLM_190010200.1;orthologous_to=LmjF.19.0520_mRNA;ortholog_cluster=OG0001758;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 206202 208913 1 + . ID=LTnewLM_190010300 LTnewLM_19 AUGUSTUS mRNA 206202 208913 1 + . ID=LTnewLM_190010300.1;Parent=LTnewLM_190010300 LTnewLM_19 AUGUSTUS CDS 206202 208913 1 + 0 ID=LTnewLM_190010300.1:CDS:1;Parent=LTnewLM_190010300.1 ### LTnewLM_19 . polypeptide 206202 208913 . + . ID=LTnewLM_190010300.1:pep;Derives_from=LTnewLM_190010300.1;orthologous_to=LmjF.19.0530_mRNA;ortholog_cluster=OG0001759;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 212965 214170 1 + . ID=LTnewLM_190010400 LTnewLM_19 AUGUSTUS mRNA 212965 214170 1 + . ID=LTnewLM_190010400.1;Parent=LTnewLM_190010400 LTnewLM_19 AUGUSTUS CDS 212965 214170 1 + 0 ID=LTnewLM_190010400.1:CDS:1;Parent=LTnewLM_190010400.1 ### LTnewLM_19 . polypeptide 212965 214170 . + . ID=LTnewLM_190010400.1:pep;Derives_from=LTnewLM_190010400.1;orthologous_to=LmjF.19.0550_mRNA;ortholog_cluster=OG0001760;product=term%3DMYND finger/zf-MYND-like zinc finger%2C mRNA-binding/Metallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753|Pfam:PF15801|Pfam:PF00557 LTnewLM_19 Pfam protein_match 212971 213093 . + . Parent=LTnewLM_190010400.1:pep;Name=PF01753;signature_desc=MYND finger LTnewLM_19 Pfam protein_match 212974 213099 . + . Parent=LTnewLM_190010400.1:pep;Name=PF15801;signature_desc=zf-MYND-like zinc finger%2C mRNA-binding LTnewLM_19 Pfam protein_match 213373 214053 . + . Parent=LTnewLM_190010400.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_19 AUGUSTUS gene 217346 221491 1 + . ID=LTnewLM_190010500 LTnewLM_19 AUGUSTUS mRNA 217346 221491 1 + . ID=LTnewLM_190010500.1;Parent=LTnewLM_190010500 LTnewLM_19 AUGUSTUS CDS 217346 221491 1 + 0 ID=LTnewLM_190010500.1:CDS:1;Parent=LTnewLM_190010500.1 ### LTnewLM_19 . polypeptide 217346 221491 . + . ID=LTnewLM_190010500.1:pep;Derives_from=LTnewLM_190010500.1;orthologous_to=LmjF.19.0560_mRNA;ortholog_cluster=OG0001761;product=term%3DCH-like domain in sperm protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06294 LTnewLM_19 Pfam protein_match 217358 217648 . + . Parent=LTnewLM_190010500.1:pep;Name=PF06294;signature_desc=CH-like domain in sperm protein ### LTnewLM_19 . pseudogene 223295 224949 . + . ID=LTnewLM_190010600:pseudogene;coverage=0.998;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.0570_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 223295 224949 . + . ID=LTnewLM_190010600.1;Parent=LTnewLM_190010600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 223295 224949 . + . ID=LTnewLM_190010600.1:pseudogenic_exon:1;Parent=LTnewLM_190010600.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 223295 224949 . + . ID=LTnewLM_190010600.1:pep;Derives_from=LTnewLM_190010600.1;product=term%3Dhypothetical protein ### LTnewLM_19 . pseudogene 230027 231624 2.54e+03 + . ID=LTnewLM_190010700:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.19.0570:mRNA 9 538;original_prot_length=549 LTnewLM_19 . pseudogenic_transcript 230027 231624 . + . ID=LTnewLM_190010700.1;Parent=LTnewLM_190010700:pseudogene LTnewLM_19 . pseudogenic_exon 230027 230506 . + . ID=LTnewLM_190010700.1:pseudogenic_exon:1;Parent=LTnewLM_190010700.1 LTnewLM_19 . pseudogenic_exon 230509 231624 . + . ID=LTnewLM_190010700.1:pseudogenic_exon:2;Parent=LTnewLM_190010700.1 ### LTnewLM_19 . polypeptide 230027 231624 . + . ID=LTnewLM_190010700.1:pep;Derives_from=LTnewLM_190010700.1;orthologous_to=LmjF.19.0540_mRNA,LmjF.19.0570_mRNA;ortholog_cluster=OG0000518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 236988 245819 1 + . ID=LTnewLM_190010800 LTnewLM_19 AUGUSTUS mRNA 236988 245819 1 + . ID=LTnewLM_190010800.1;Parent=LTnewLM_190010800 LTnewLM_19 AUGUSTUS CDS 236988 245819 1 + 0 ID=LTnewLM_190010800.1:CDS:1;Parent=LTnewLM_190010800.1 ### LTnewLM_19 . polypeptide 236988 245819 . + . ID=LTnewLM_190010800.1:pep;Derives_from=LTnewLM_190010800.1;orthologous_to=LmjF.19.0580_mRNA;ortholog_cluster=OG0001762;product=term%3DTubulin binding cofactor C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07986 LTnewLM_19 Pfam protein_match 242187 242516 . + . Parent=LTnewLM_190010800.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C LTnewLM_19 Pfam protein_match 242877 243104 . + . Parent=LTnewLM_190010800.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C LTnewLM_19 Pfam protein_match 243684 244013 . + . Parent=LTnewLM_190010800.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C ### LTnewLM_19 . pseudogene 250420 255438 . + . ID=LTnewLM_190010900:pseudogene;coverage=0.985;sequence_ID=0.896;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.0590_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 250420 255438 . + . ID=LTnewLM_190010900.1;Parent=LTnewLM_190010900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 250420 255438 . + . ID=LTnewLM_190010900.1:pseudogenic_exon:1;Parent=LTnewLM_190010900.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 250420 255438 . + . ID=LTnewLM_190010900.1:pep;Derives_from=LTnewLM_190010900.1;orthologous_to=LmjF.19.0590_mRNA;ortholog_cluster=OG0007491;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 252628 253191 . + . Parent=LTnewLM_190010900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_19 Pfam protein_match 252631 253188 . + . Parent=LTnewLM_190010900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 263665 265956 1 + . ID=LTnewLM_190011000 LTnewLM_19 AUGUSTUS mRNA 263665 265956 1 + . ID=LTnewLM_190011000.1;Parent=LTnewLM_190011000 LTnewLM_19 AUGUSTUS CDS 263665 265956 1 + 0 ID=LTnewLM_190011000.1:CDS:1;Parent=LTnewLM_190011000.1 ### LTnewLM_19 . polypeptide 263665 265956 . + . ID=LTnewLM_190011000.1:pep;Derives_from=LTnewLM_190011000.1;orthologous_to=LmjF.19.0600_mRNA;ortholog_cluster=OG0001763;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 271641 271922 1 + . ID=LTnewLM_190011100 LTnewLM_19 AUGUSTUS mRNA 271641 271922 1 + . ID=LTnewLM_190011100.1;Parent=LTnewLM_190011100 LTnewLM_19 AUGUSTUS CDS 271641 271922 1 + 0 ID=LTnewLM_190011100.1:CDS:1;Parent=LTnewLM_190011100.1 ### LTnewLM_19 . polypeptide 271641 271922 . + . ID=LTnewLM_190011100.1:pep;Derives_from=LTnewLM_190011100.1;orthologous_to=LmjF.19.0610_mRNA;ortholog_cluster=OG0001764;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 273323 275557 1 + . ID=LTnewLM_190011200 LTnewLM_19 AUGUSTUS mRNA 273323 275557 1 + . ID=LTnewLM_190011200.1;Parent=LTnewLM_190011200 LTnewLM_19 AUGUSTUS CDS 273323 275557 1 + 0 ID=LTnewLM_190011200.1:CDS:1;Parent=LTnewLM_190011200.1 ### LTnewLM_19 . polypeptide 273323 275557 . + . ID=LTnewLM_190011200.1:pep;Derives_from=LTnewLM_190011200.1;orthologous_to=LmjF.19.0620_mRNA;ortholog_cluster=OG0001765;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 277543 277980 1 + . ID=LTnewLM_190011300 LTnewLM_19 AUGUSTUS mRNA 277543 277980 1 + . ID=LTnewLM_190011300.1;Parent=LTnewLM_190011300 LTnewLM_19 AUGUSTUS CDS 277543 277980 1 + 0 ID=LTnewLM_190011300.1:CDS:1;Parent=LTnewLM_190011300.1 ### LTnewLM_19 . polypeptide 277543 277980 . + . ID=LTnewLM_190011300.1:pep;Derives_from=LTnewLM_190011300.1;orthologous_to=LmjF.19.0630_mRNA;ortholog_cluster=OG0001766;product=term%3DCore histone H2A/H2B/H3/H4/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF00808;Ontology_term=GO:0005622,GO:0043565,GO:0003677 LTnewLM_19 Pfam protein_match 277588 277962 . + . Parent=LTnewLM_190011300.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_19 Pfam protein_match 277783 277953 . + . Parent=LTnewLM_190011300.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_19 AUGUSTUS gene 280057 282813 1 + . ID=LTnewLM_190011400 LTnewLM_19 AUGUSTUS mRNA 280057 282813 1 + . ID=LTnewLM_190011400.1;Parent=LTnewLM_190011400 LTnewLM_19 AUGUSTUS CDS 280057 282813 1 + 0 ID=LTnewLM_190011400.1:CDS:1;Parent=LTnewLM_190011400.1 ### LTnewLM_19 . polypeptide 280057 282813 . + . ID=LTnewLM_190011400.1:pep;Derives_from=LTnewLM_190011400.1;orthologous_to=LmjF.19.0640_mRNA;ortholog_cluster=OG0001767;product=term%3DReceptor family ligand binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01094 LTnewLM_19 Pfam protein_match 281545 282462 . + . Parent=LTnewLM_190011400.1:pep;Name=PF01094;signature_desc=Receptor family ligand binding region ### LTnewLM_19 AUGUSTUS gene 284134 289932 1 + . ID=LTnewLM_190011500 LTnewLM_19 AUGUSTUS mRNA 284134 289932 1 + . ID=LTnewLM_190011500.1;Parent=LTnewLM_190011500 LTnewLM_19 AUGUSTUS CDS 284134 289932 1 + 0 ID=LTnewLM_190011500.1:CDS:1;Parent=LTnewLM_190011500.1 ### LTnewLM_19 . polypeptide 284134 289932 . + . ID=LTnewLM_190011500.1:pep;Derives_from=LTnewLM_190011500.1;orthologous_to=LmjF.19.0650_mRNA;ortholog_cluster=OG0001768;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 290994 292322 1 + . ID=LTnewLM_190011600 LTnewLM_19 AUGUSTUS mRNA 290994 292322 1 + . ID=LTnewLM_190011600.1;Parent=LTnewLM_190011600 LTnewLM_19 AUGUSTUS CDS 290994 292322 1 + 0 ID=LTnewLM_190011600.1:CDS:1;Parent=LTnewLM_190011600.1 ### LTnewLM_19 . polypeptide 290994 292322 . + . ID=LTnewLM_190011600.1:pep;Derives_from=LTnewLM_190011600.1;orthologous_to=LmjF.19.0660_mRNA;ortholog_cluster=OG0001769;product=term%3DRNA polymerase Rpb3/Rpb11 dimerisation domain/RNA polymerase Rpb3/RpoA insert domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01193|Pfam:PF01000;Ontology_term=GO:0006351,GO:0003899,GO:0046983 LTnewLM_19 Pfam protein_match 291354 292244 . + . Parent=LTnewLM_190011600.1:pep;Name=PF01193;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain;Ontology_term=GO:0046983,GO:0006351 LTnewLM_19 Pfam protein_match 291444 291899 . + . Parent=LTnewLM_190011600.1:pep;Name=PF01000;signature_desc=RNA polymerase Rpb3/RpoA insert domain;Ontology_term=GO:0003899,GO:0046983,GO:0006351 ### LTnewLM_19 AUGUSTUS gene 293341 294426 1 + . ID=LTnewLM_190011700 LTnewLM_19 AUGUSTUS mRNA 293341 294426 1 + . ID=LTnewLM_190011700.1;Parent=LTnewLM_190011700 LTnewLM_19 AUGUSTUS CDS 293341 294426 1 + 0 ID=LTnewLM_190011700.1:CDS:1;Parent=LTnewLM_190011700.1 ### LTnewLM_19 . polypeptide 293341 294426 . + . ID=LTnewLM_190011700.1:pep;Derives_from=LTnewLM_190011700.1;orthologous_to=LmjF.19.0670_mRNA;ortholog_cluster=OG0001770;product=term%3DUtp11 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03998;Ontology_term=GO:0006364,GO:0032040 LTnewLM_19 Pfam protein_match 293398 294012 . + . Parent=LTnewLM_190011700.1:pep;Name=PF03998;signature_desc=Utp11 protein;Ontology_term=GO:0006364,GO:0032040 ### LTnewLM_19 . polypeptide 296177 298751 . + . ID=LTnewLM_190011800.1:pep;Derives_from=LTnewLM_190011800.1;orthologous_to=LTnewLM_190011800.2,LmjF.19.0680_mRNA;ortholog_cluster=OG0000366;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_19 Pfam protein_match 296837 297826 . + . Parent=LTnewLM_190011800.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_19 Pfam protein_match 296882 296971 . + . Parent=LTnewLM_190011800.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_19 AUGUSTUS gene 296177 299563 1.52 + . ID=LTnewLM_190011800 LTnewLM_19 AUGUSTUS mRNA 296177 298751 0.52 + . ID=LTnewLM_190011800.1;Parent=LTnewLM_190011800 LTnewLM_19 AUGUSTUS CDS 296177 298677 0.96 + 0 ID=LTnewLM_190011800.1:CDS:1;Parent=LTnewLM_190011800.1 LTnewLM_19 AUGUSTUS CDS 298739 298751 0.54 + 1 ID=LTnewLM_190011800.1:CDS:2;Parent=LTnewLM_190011800.1 LTnewLM_19 AUGUSTUS mRNA 296177 299563 1 + . ID=LTnewLM_190011800.2;Parent=LTnewLM_190011800 LTnewLM_19 AUGUSTUS CDS 296177 299563 1 + 0 ID=LTnewLM_190011800.2:CDS:1;Parent=LTnewLM_190011800.2 ### LTnewLM_19 . polypeptide 296177 299563 . + . ID=LTnewLM_190011800.2:pep;Derives_from=LTnewLM_190011800.2;orthologous_to=LTnewLM_190011800.1,LmjF.19.0680_mRNA;ortholog_cluster=OG0000366;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_19 Pfam protein_match 296837 297826 . + . Parent=LTnewLM_190011800.2:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_19 Pfam protein_match 296882 296971 . + . Parent=LTnewLM_190011800.2:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_19 AUGUSTUS gene 304335 307634 1 + . ID=LTnewLM_190011900 LTnewLM_19 AUGUSTUS mRNA 304335 307634 1 + . ID=LTnewLM_190011900.1;Parent=LTnewLM_190011900 LTnewLM_19 AUGUSTUS CDS 304335 307634 1 + 0 ID=LTnewLM_190011900.1:CDS:1;Parent=LTnewLM_190011900.1 ### LTnewLM_19 . polypeptide 304335 307634 . + . ID=LTnewLM_190011900.1:pep;Derives_from=LTnewLM_190011900.1;orthologous_to=LmjF.19.0690_mRNA;ortholog_cluster=OG0001771;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_19 Pfam protein_match 305019 306008 . + . Parent=LTnewLM_190011900.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_19 Pfam protein_match 305064 305153 . + . Parent=LTnewLM_190011900.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_19 AUGUSTUS gene 311686 318528 1 + . ID=LTnewLM_190012000 LTnewLM_19 AUGUSTUS mRNA 311686 318528 1 + . ID=LTnewLM_190012000.1;Parent=LTnewLM_190012000 LTnewLM_19 AUGUSTUS CDS 311686 318528 1 + 0 ID=LTnewLM_190012000.1:CDS:1;Parent=LTnewLM_190012000.1 ### LTnewLM_19 . polypeptide 311686 318528 . + . ID=LTnewLM_190012000.1:pep;Derives_from=LTnewLM_190012000.1;orthologous_to=LmjF.19.0700_mRNA;ortholog_cluster=OG0001772;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_19 Pfam protein_match 312097 312222 . + . Parent=LTnewLM_190012000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_19 Pfam protein_match 312148 312219 . + . Parent=LTnewLM_190012000.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_19 Pfam protein_match 312565 313311 . + . Parent=LTnewLM_190012000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_19 AUGUSTUS gene 320029 320997 1 + . ID=LTnewLM_190012100 LTnewLM_19 AUGUSTUS mRNA 320029 320997 1 + . ID=LTnewLM_190012100.1;Parent=LTnewLM_190012100 LTnewLM_19 AUGUSTUS CDS 320029 320997 1 + 0 ID=LTnewLM_190012100.1:CDS:1;Parent=LTnewLM_190012100.1 ### LTnewLM_19 . polypeptide 320029 320997 . + . ID=LTnewLM_190012100.1:pep;Derives_from=LTnewLM_190012100.1;orthologous_to=LmjF.19.0710_mRNA;ortholog_cluster=OG0001773;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_19 Pfam protein_match 320035 320484 . + . Parent=LTnewLM_190012100.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_19 Pfam protein_match 320497 320976 . + . Parent=LTnewLM_190012100.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_19 AUGUSTUS gene 322547 323461 1 + . ID=LTnewLM_190012200 LTnewLM_19 AUGUSTUS mRNA 322547 323461 1 + . ID=LTnewLM_190012200.1;Parent=LTnewLM_190012200 LTnewLM_19 AUGUSTUS CDS 322547 323461 1 + 0 ID=LTnewLM_190012200.1:CDS:1;Parent=LTnewLM_190012200.1 ### LTnewLM_19 . polypeptide 322547 323461 . + . ID=LTnewLM_190012200.1:pep;Derives_from=LTnewLM_190012200.1;orthologous_to=LmjF.19.0720_mRNA;ortholog_cluster=OG0001774;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 325360 326517 1 + . ID=LTnewLM_190012300 LTnewLM_19 AUGUSTUS mRNA 325360 326517 1 + . ID=LTnewLM_190012300.1;Parent=LTnewLM_190012300 LTnewLM_19 AUGUSTUS CDS 325360 326517 1 + 0 ID=LTnewLM_190012300.1:CDS:1;Parent=LTnewLM_190012300.1 ### LTnewLM_19 . polypeptide 325360 326517 . + . ID=LTnewLM_190012300.1:pep;Derives_from=LTnewLM_190012300.1;orthologous_to=LmjF.19.0730_mRNA;ortholog_cluster=OG0001775;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13649|Pfam:PF08242|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_19 Pfam protein_match 325543 325851 . + . Parent=LTnewLM_190012300.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_19 Pfam protein_match 325546 325854 . + . Parent=LTnewLM_190012300.1:pep;Name=PF08242;signature_desc=Methyltransferase domain LTnewLM_19 Pfam protein_match 325546 325857 . + . Parent=LTnewLM_190012300.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_19 AUGUSTUS gene 328456 329799 1 + . ID=LTnewLM_190012400 LTnewLM_19 AUGUSTUS mRNA 328456 329799 1 + . ID=LTnewLM_190012400.1;Parent=LTnewLM_190012400 LTnewLM_19 AUGUSTUS CDS 328456 329799 1 + 0 ID=LTnewLM_190012400.1:CDS:1;Parent=LTnewLM_190012400.1 ### LTnewLM_19 . polypeptide 328456 329799 . + . ID=LTnewLM_190012400.1:pep;Derives_from=LTnewLM_190012400.1;orthologous_to=LmjF.19.0740_mRNA;ortholog_cluster=OG0001776;product=term%3DVacuolar protein sorting protein 36 Vps36/EAP30/Vps36 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11605|Pfam:PF04157;Ontology_term=GO:0032266,GO:0043130 LTnewLM_19 Pfam protein_match 328468 328734 . + . Parent=LTnewLM_190012400.1:pep;Name=PF11605;signature_desc=Vacuolar protein sorting protein 36 Vps36;Ontology_term=GO:0032266,GO:0043130 LTnewLM_19 Pfam protein_match 328945 329742 . + . Parent=LTnewLM_190012400.1:pep;Name=PF04157;signature_desc=EAP30/Vps36 family ### LTnewLM_19 AUGUSTUS gene 330661 332235 1 + . ID=LTnewLM_190012500 LTnewLM_19 AUGUSTUS mRNA 330661 332235 1 + . ID=LTnewLM_190012500.1;Parent=LTnewLM_190012500 LTnewLM_19 AUGUSTUS CDS 330661 332235 1 + 0 ID=LTnewLM_190012500.1:CDS:1;Parent=LTnewLM_190012500.1 ### LTnewLM_19 . polypeptide 330661 332235 . + . ID=LTnewLM_190012500.1:pep;Derives_from=LTnewLM_190012500.1;orthologous_to=LmjF.19.0750_mRNA;ortholog_cluster=OG0001777;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 334117 335583 1 + . ID=LTnewLM_190012600 LTnewLM_19 AUGUSTUS mRNA 334117 335583 1 + . ID=LTnewLM_190012600.1;Parent=LTnewLM_190012600 LTnewLM_19 AUGUSTUS CDS 334117 335583 1 + 0 ID=LTnewLM_190012600.1:CDS:1;Parent=LTnewLM_190012600.1 ### LTnewLM_19 . polypeptide 334117 335583 . + . ID=LTnewLM_190012600.1:pep;Derives_from=LTnewLM_190012600.1;orthologous_to=LmjF.19.0760_mRNA;ortholog_cluster=OG0001778;product=term%3DMembrane transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03547;Ontology_term=GO:0016021,GO:0055085 LTnewLM_19 Pfam protein_match 334168 335550 . + . Parent=LTnewLM_190012600.1:pep;Name=PF03547;signature_desc=Membrane transport protein;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_19 AUGUSTUS gene 336528 337235 1 + . ID=LTnewLM_190012700 LTnewLM_19 AUGUSTUS mRNA 336528 337235 1 + . ID=LTnewLM_190012700.1;Parent=LTnewLM_190012700 LTnewLM_19 AUGUSTUS CDS 336528 337235 1 + 0 ID=LTnewLM_190012700.1:CDS:1;Parent=LTnewLM_190012700.1 ### LTnewLM_19 . polypeptide 336528 337235 . + . ID=LTnewLM_190012700.1:pep;Derives_from=LTnewLM_190012700.1;orthologous_to=LmjF.19.0770_mRNA;ortholog_cluster=OG0001779;product=term%3DSnare region anchored in the vesicle membrane C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12352 LTnewLM_19 Pfam protein_match 336969 337160 . + . Parent=LTnewLM_190012700.1:pep;Name=PF12352;signature_desc=Snare region anchored in the vesicle membrane C-terminus ### LTnewLM_19 AUGUSTUS gene 337901 338659 1 + . ID=LTnewLM_190012800 LTnewLM_19 AUGUSTUS mRNA 337901 338659 1 + . ID=LTnewLM_190012800.1;Parent=LTnewLM_190012800 LTnewLM_19 AUGUSTUS CDS 337901 338659 1 + 0 ID=LTnewLM_190012800.1:CDS:1;Parent=LTnewLM_190012800.1 ### LTnewLM_19 . polypeptide 337901 338659 . + . ID=LTnewLM_190012800.1:pep;Derives_from=LTnewLM_190012800.1;orthologous_to=LmjF.19.0780_mRNA;ortholog_cluster=OG0001780;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 339434 341659 1 + . ID=LTnewLM_190012900 LTnewLM_19 AUGUSTUS mRNA 339434 341659 1 + . ID=LTnewLM_190012900.1;Parent=LTnewLM_190012900 LTnewLM_19 AUGUSTUS CDS 339434 341659 1 + 0 ID=LTnewLM_190012900.1:CDS:1;Parent=LTnewLM_190012900.1 ### LTnewLM_19 . polypeptide 339434 341659 . + . ID=LTnewLM_190012900.1:pep;Derives_from=LTnewLM_190012900.1;orthologous_to=LmjF.19.0790_mRNA;ortholog_cluster=OG0001781;product=term%3DPutative TPR-like repeat/SRP72 RNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17004|Pfam:PF08492;Ontology_term=GO:0008312,GO:0048500,GO:0006614 LTnewLM_19 Pfam protein_match 339521 339847 . + . Parent=LTnewLM_190012900.1:pep;Name=PF17004;signature_desc=Putative TPR-like repeat LTnewLM_19 Pfam protein_match 341399 341494 . + . Parent=LTnewLM_190012900.1:pep;Name=PF08492;signature_desc=SRP72 RNA-binding domain;Ontology_term=GO:0008312,GO:0006614,GO:0048500 ### LTnewLM_19 AUGUSTUS gene 342431 344269 1 + . ID=LTnewLM_190013000 LTnewLM_19 AUGUSTUS mRNA 342431 344269 1 + . ID=LTnewLM_190013000.1;Parent=LTnewLM_190013000 LTnewLM_19 AUGUSTUS CDS 342431 344269 1 + 0 ID=LTnewLM_190013000.1:CDS:1;Parent=LTnewLM_190013000.1 ### LTnewLM_19 . polypeptide 342431 344269 . + . ID=LTnewLM_190013000.1:pep;Derives_from=LTnewLM_190013000.1;orthologous_to=LmjF.19.0800_mRNA;ortholog_cluster=OG0001782;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF12848;Ontology_term=GO:0016887,GO:0005524 LTnewLM_19 Pfam protein_match 342698 343177 . + . Parent=LTnewLM_190013000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_19 Pfam protein_match 343295 343510 . + . Parent=LTnewLM_190013000.1:pep;Name=PF12848;signature_desc=ABC transporter LTnewLM_19 Pfam protein_match 343646 344038 . + . Parent=LTnewLM_190013000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_19 AUGUSTUS gene 347054 349663 1 + . ID=LTnewLM_190013100 LTnewLM_19 AUGUSTUS mRNA 347054 349663 1 + . ID=LTnewLM_190013100.1;Parent=LTnewLM_190013100 LTnewLM_19 AUGUSTUS CDS 347054 349663 1 + 0 ID=LTnewLM_190013100.1:CDS:1;Parent=LTnewLM_190013100.1 ### LTnewLM_19 . polypeptide 347054 349663 . + . ID=LTnewLM_190013100.1:pep;Derives_from=LTnewLM_190013100.1;orthologous_to=LmjF.19.0810_mRNA;ortholog_cluster=OG0001783;product=term%3DVps53-like%2C N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04100 LTnewLM_19 Pfam protein_match 347132 348214 . + . Parent=LTnewLM_190013100.1:pep;Name=PF04100;signature_desc=Vps53-like%2C N-terminal ### LTnewLM_19 AUGUSTUS gene 350617 350985 1 + . ID=LTnewLM_190013200 LTnewLM_19 AUGUSTUS mRNA 350617 350985 1 + . ID=LTnewLM_190013200.1;Parent=LTnewLM_190013200 LTnewLM_19 AUGUSTUS CDS 350617 350985 1 + 0 ID=LTnewLM_190013200.1:CDS:1;Parent=LTnewLM_190013200.1 ### LTnewLM_19 . polypeptide 350617 350985 . + . ID=LTnewLM_190013200.1:pep;Derives_from=LTnewLM_190013200.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 350653 350949 . + . Parent=LTnewLM_190013200.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 . pseudogene 351721 351999 . + . ID=LTnewLM_190013300:pseudogene;coverage=0.989;sequence_ID=0.893;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.0830_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 351721 351999 . + . ID=LTnewLM_190013300.1;Parent=LTnewLM_190013300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 351721 351999 . + . ID=LTnewLM_190013300.1:pseudogenic_exon:1;Parent=LTnewLM_190013300.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 351721 351999 . + . ID=LTnewLM_190013300.1:pep;Derives_from=LTnewLM_190013300.1;orthologous_to=LmjF.19.0830_mRNA,LmjF.19.0843_mRNA,LmjF.19.0847_mRNA;ortholog_cluster=OG0000284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 352817 353227 1 + . ID=LTnewLM_190013400 LTnewLM_19 AUGUSTUS mRNA 352817 353227 1 + . ID=LTnewLM_190013400.1;Parent=LTnewLM_190013400 LTnewLM_19 AUGUSTUS CDS 352817 353227 1 + 0 ID=LTnewLM_190013400.1:CDS:1;Parent=LTnewLM_190013400.1 ### LTnewLM_19 . polypeptide 352817 353227 . + . ID=LTnewLM_190013400.1:pep;Derives_from=LTnewLM_190013400.1;orthologous_to=LmjF.19.0840_mRNA,LmjF.19.0844_mRNA;ortholog_cluster=OG0000367;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 352853 353140 . + . Parent=LTnewLM_190013400.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 355532 355897 1 + . ID=LTnewLM_190013500 LTnewLM_19 AUGUSTUS mRNA 355532 355897 1 + . ID=LTnewLM_190013500.1;Parent=LTnewLM_190013500 LTnewLM_19 AUGUSTUS CDS 355532 355897 1 + 0 ID=LTnewLM_190013500.1:CDS:1;Parent=LTnewLM_190013500.1 ### LTnewLM_19 . polypeptide 355532 355897 . + . ID=LTnewLM_190013500.1:pep;Derives_from=LTnewLM_190013500.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 355568 355861 . + . Parent=LTnewLM_190013500.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 358000 358377 1 + . ID=LTnewLM_190013600 LTnewLM_19 AUGUSTUS mRNA 358000 358377 1 + . ID=LTnewLM_190013600.1;Parent=LTnewLM_190013600 LTnewLM_19 AUGUSTUS CDS 358000 358377 1 + 0 ID=LTnewLM_190013600.1:CDS:1;Parent=LTnewLM_190013600.1 ### LTnewLM_19 . polypeptide 358000 358377 . + . ID=LTnewLM_190013600.1:pep;Derives_from=LTnewLM_190013600.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 358036 358329 . + . Parent=LTnewLM_190013600.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 358998 359375 1 + . ID=LTnewLM_190013700 LTnewLM_19 AUGUSTUS mRNA 358998 359375 1 + . ID=LTnewLM_190013700.1;Parent=LTnewLM_190013700 LTnewLM_19 AUGUSTUS CDS 358998 359375 1 + 0 ID=LTnewLM_190013700.1:CDS:1;Parent=LTnewLM_190013700.1 ### LTnewLM_19 . polypeptide 358998 359375 . + . ID=LTnewLM_190013700.1:pep;Derives_from=LTnewLM_190013700.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 359034 359327 . + . Parent=LTnewLM_190013700.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 360039 360404 1 + . ID=LTnewLM_190013800 LTnewLM_19 AUGUSTUS mRNA 360039 360404 1 + . ID=LTnewLM_190013800.1;Parent=LTnewLM_190013800 LTnewLM_19 AUGUSTUS CDS 360039 360404 1 + 0 ID=LTnewLM_190013800.1:CDS:1;Parent=LTnewLM_190013800.1 ### LTnewLM_19 . polypeptide 360039 360404 . + . ID=LTnewLM_190013800.1:pep;Derives_from=LTnewLM_190013800.1;orthologous_to=LmjF.19.0880_mRNA,LmjF.19.0910_mRNA;ortholog_cluster=OG0000368;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 360075 360368 . + . Parent=LTnewLM_190013800.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 362668 363045 1 + . ID=LTnewLM_190013900 LTnewLM_19 AUGUSTUS mRNA 362668 363045 1 + . ID=LTnewLM_190013900.1;Parent=LTnewLM_190013900 LTnewLM_19 AUGUSTUS CDS 362668 363045 1 + 0 ID=LTnewLM_190013900.1:CDS:1;Parent=LTnewLM_190013900.1 ### LTnewLM_19 . polypeptide 362668 363045 . + . ID=LTnewLM_190013900.1:pep;Derives_from=LTnewLM_190013900.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 362704 362997 . + . Parent=LTnewLM_190013900.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 363735 364112 1 + . ID=LTnewLM_190014000 LTnewLM_19 AUGUSTUS mRNA 363735 364112 1 + . ID=LTnewLM_190014000.1;Parent=LTnewLM_190014000 LTnewLM_19 AUGUSTUS CDS 363735 364112 1 + 0 ID=LTnewLM_190014000.1:CDS:1;Parent=LTnewLM_190014000.1 ### LTnewLM_19 . polypeptide 363735 364112 . + . ID=LTnewLM_190014000.1:pep;Derives_from=LTnewLM_190014000.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014100.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 363771 364064 . + . Parent=LTnewLM_190014000.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 364805 365182 1 + . ID=LTnewLM_190014100 LTnewLM_19 AUGUSTUS mRNA 364805 365182 1 + . ID=LTnewLM_190014100.1;Parent=LTnewLM_190014100 LTnewLM_19 AUGUSTUS CDS 364805 365182 1 + 0 ID=LTnewLM_190014100.1:CDS:1;Parent=LTnewLM_190014100.1 ### LTnewLM_19 . polypeptide 364805 365182 . + . ID=LTnewLM_190014100.1:pep;Derives_from=LTnewLM_190014100.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014200.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 364841 365134 . + . Parent=LTnewLM_190014100.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 365881 366246 1 + . ID=LTnewLM_190014200 LTnewLM_19 AUGUSTUS mRNA 365881 366246 1 + . ID=LTnewLM_190014200.1;Parent=LTnewLM_190014200 LTnewLM_19 AUGUSTUS CDS 365881 366246 1 + 0 ID=LTnewLM_190014200.1:CDS:1;Parent=LTnewLM_190014200.1 ### LTnewLM_19 . polypeptide 365881 366246 . + . ID=LTnewLM_190014200.1:pep;Derives_from=LTnewLM_190014200.1;orthologous_to=LTnewLM_000007000.1,LTnewLM_190013200.1,LTnewLM_190013500.1,LTnewLM_190013600.1,LTnewLM_190013700.1,LTnewLM_190013900.1,LTnewLM_190014000.1,LTnewLM_190014100.1,LmjF.19.0860_mRNA,LmjF.19.0870_mRNA,LmjF.19.0900_mRNA;ortholog_cluster=OG0000012;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_19 Pfam protein_match 365917 366210 . + . Parent=LTnewLM_190014200.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_19 AUGUSTUS gene 368063 370084 1 + . ID=LTnewLM_190014300 LTnewLM_19 AUGUSTUS mRNA 368063 370084 1 + . ID=LTnewLM_190014300.1;Parent=LTnewLM_190014300 LTnewLM_19 AUGUSTUS CDS 368063 370084 1 + 0 ID=LTnewLM_190014300.1:CDS:1;Parent=LTnewLM_190014300.1 ### LTnewLM_19 . polypeptide 368063 370084 . + . ID=LTnewLM_190014300.1:pep;Derives_from=LTnewLM_190014300.1;orthologous_to=LmjF.19.0920_mRNA;ortholog_cluster=OG0001784;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_19 Pfam protein_match 368297 370021 . + . Parent=LTnewLM_190014300.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_19 AUGUSTUS gene 374001 376727 1 + . ID=LTnewLM_190014400 LTnewLM_19 AUGUSTUS mRNA 374001 376727 1 + . ID=LTnewLM_190014400.1;Parent=LTnewLM_190014400 LTnewLM_19 AUGUSTUS CDS 374001 376727 1 + 0 ID=LTnewLM_190014400.1:CDS:1;Parent=LTnewLM_190014400.1 ### LTnewLM_19 . polypeptide 374001 376727 . + . ID=LTnewLM_190014400.1:pep;Derives_from=LTnewLM_190014400.1;orthologous_to=LmjF.19.0930_mRNA;ortholog_cluster=OG0001785;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 377449 379416 1 + . ID=LTnewLM_190014500 LTnewLM_19 AUGUSTUS mRNA 377449 379416 1 + . ID=LTnewLM_190014500.1;Parent=LTnewLM_190014500 LTnewLM_19 AUGUSTUS CDS 377449 379416 1 + 0 ID=LTnewLM_190014500.1:CDS:1;Parent=LTnewLM_190014500.1 ### LTnewLM_19 . polypeptide 377449 379416 . + . ID=LTnewLM_190014500.1:pep;Derives_from=LTnewLM_190014500.1;orthologous_to=LmjF.19.0940_mRNA;ortholog_cluster=OG0001786;product=term%3DCAP-Gly domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01302 LTnewLM_19 Pfam protein_match 377536 377700 . + . Parent=LTnewLM_190014500.1:pep;Name=PF01302;signature_desc=CAP-Gly domain ### LTnewLM_19 AUGUSTUS gene 380381 382801 1 + . ID=LTnewLM_190014600 LTnewLM_19 AUGUSTUS mRNA 380381 382801 1 + . ID=LTnewLM_190014600.1;Parent=LTnewLM_190014600 LTnewLM_19 AUGUSTUS CDS 380381 382801 1 + 0 ID=LTnewLM_190014600.1:CDS:1;Parent=LTnewLM_190014600.1 ### LTnewLM_19 . polypeptide 380381 382801 . + . ID=LTnewLM_190014600.1:pep;Derives_from=LTnewLM_190014600.1;orthologous_to=LmjF.19.0950_mRNA;ortholog_cluster=OG0001787;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 383493 383831 1 + . ID=LTnewLM_190014700 LTnewLM_19 AUGUSTUS mRNA 383493 383831 1 + . ID=LTnewLM_190014700.1;Parent=LTnewLM_190014700 LTnewLM_19 AUGUSTUS CDS 383493 383831 1 + 0 ID=LTnewLM_190014700.1:CDS:1;Parent=LTnewLM_190014700.1 ### LTnewLM_19 . polypeptide 383493 383831 . + . ID=LTnewLM_190014700.1:pep;Derives_from=LTnewLM_190014700.1;orthologous_to=LmjF.19.0960_mRNA;ortholog_cluster=OG0001788;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_19 Pfam protein_match 383508 383759 . + . Parent=LTnewLM_190014700.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_19 AUGUSTUS gene 384742 385347 1 + . ID=LTnewLM_190014800 LTnewLM_19 AUGUSTUS mRNA 384742 385347 1 + . ID=LTnewLM_190014800.1;Parent=LTnewLM_190014800 LTnewLM_19 AUGUSTUS CDS 384742 385347 1 + 0 ID=LTnewLM_190014800.1:CDS:1;Parent=LTnewLM_190014800.1 ### LTnewLM_19 . polypeptide 384742 385347 . + . ID=LTnewLM_190014800.1:pep;Derives_from=LTnewLM_190014800.1;orthologous_to=LmjF.19.0970_mRNA;ortholog_cluster=OG0001789;product=term%3DFKBP-type peptidyl-prolyl cis-trans isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00254;Ontology_term=GO:0006457 LTnewLM_19 Pfam protein_match 384961 385227 . + . Parent=LTnewLM_190014800.1:pep;Name=PF00254;signature_desc=FKBP-type peptidyl-prolyl cis-trans isomerase;Ontology_term=GO:0006457 ### LTnewLM_19 AUGUSTUS gene 388397 391282 1 + . ID=LTnewLM_190014900 LTnewLM_19 AUGUSTUS mRNA 388397 391282 1 + . ID=LTnewLM_190014900.1;Parent=LTnewLM_190014900 LTnewLM_19 AUGUSTUS CDS 388397 391282 1 + 0 ID=LTnewLM_190014900.1:CDS:1;Parent=LTnewLM_190014900.1 ### LTnewLM_19 . polypeptide 388397 391282 . + . ID=LTnewLM_190014900.1:pep;Derives_from=LTnewLM_190014900.1;orthologous_to=LmjF.19.0980_mRNA;ortholog_cluster=OG0001790;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_19 Pfam protein_match 390146 390640 . + . Parent=LTnewLM_190014900.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_19 AUGUSTUS gene 396292 398244 1 + . ID=LTnewLM_190015000 LTnewLM_19 AUGUSTUS mRNA 396292 398244 1 + . ID=LTnewLM_190015000.1;Parent=LTnewLM_190015000 LTnewLM_19 AUGUSTUS CDS 396292 398244 1 + 0 ID=LTnewLM_190015000.1:CDS:1;Parent=LTnewLM_190015000.1 ### LTnewLM_19 . polypeptide 396292 398244 . + . ID=LTnewLM_190015000.1:pep;Derives_from=LTnewLM_190015000.1;orthologous_to=LmjF.19.0985_mRNA,LmjF.19.0995_mRNA;ortholog_cluster=OG0000369;product=term%3DAMP-binding enzyme/AMP-binding enzyme C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501|Pfam:PF13193;Ontology_term=GO:0003824,GO:0008152 LTnewLM_19 Pfam protein_match 396613 397845 . + . Parent=LTnewLM_190015000.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_19 Pfam protein_match 397876 398121 . + . Parent=LTnewLM_190015000.1:pep;Name=PF13193;signature_desc=AMP-binding enzyme C-terminal domain ### LTnewLM_19 . pseudogene 401373 403263 . + . ID=LTnewLM_190015100:pseudogene;coverage=0.990;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.0995_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 401373 403263 . + . ID=LTnewLM_190015100.1;Parent=LTnewLM_190015100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 401373 403263 . + . ID=LTnewLM_190015100.1:pseudogenic_exon:1;Parent=LTnewLM_190015100.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 401373 403263 . + . ID=LTnewLM_190015100.1:pep;Derives_from=LTnewLM_190015100.1;product=term%3Dhypothetical protein ### LTnewLM_19 AUGUSTUS gene 407963 409957 1 + . ID=LTnewLM_190015200 LTnewLM_19 AUGUSTUS mRNA 407963 409957 1 + . ID=LTnewLM_190015200.1;Parent=LTnewLM_190015200 LTnewLM_19 AUGUSTUS CDS 407963 409957 1 + 0 ID=LTnewLM_190015200.1:CDS:1;Parent=LTnewLM_190015200.1 ### LTnewLM_19 . polypeptide 407963 409957 . + . ID=LTnewLM_190015200.1:pep;Derives_from=LTnewLM_190015200.1;orthologous_to=LmjF.19.1005_mRNA;ortholog_cluster=OG0001791;product=term%3DAMP-binding enzyme/AMP-binding enzyme C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501|Pfam:PF13193;Ontology_term=GO:0003824,GO:0008152 LTnewLM_19 Pfam protein_match 408323 409558 . + . Parent=LTnewLM_190015200.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_19 Pfam protein_match 409589 409834 . + . Parent=LTnewLM_190015200.1:pep;Name=PF13193;signature_desc=AMP-binding enzyme C-terminal domain ### LTnewLM_19 AUGUSTUS gene 413009 415441 1 + . ID=LTnewLM_190015300 LTnewLM_19 AUGUSTUS mRNA 413009 415441 1 + . ID=LTnewLM_190015300.1;Parent=LTnewLM_190015300 LTnewLM_19 AUGUSTUS CDS 413009 415441 1 + 0 ID=LTnewLM_190015300.1:CDS:1;Parent=LTnewLM_190015300.1 ### LTnewLM_19 . polypeptide 413009 415441 . + . ID=LTnewLM_190015300.1:pep;Derives_from=LTnewLM_190015300.1;orthologous_to=LmjF.19.1010_mRNA;ortholog_cluster=OG0001792;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 415223 415333 . + . Parent=LTnewLM_190015300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 417217 419262 1 + . ID=LTnewLM_190015400 LTnewLM_19 AUGUSTUS mRNA 417217 419262 1 + . ID=LTnewLM_190015400.1;Parent=LTnewLM_190015400 LTnewLM_19 AUGUSTUS CDS 417217 419262 1 + 0 ID=LTnewLM_190015400.1:CDS:1;Parent=LTnewLM_190015400.1 ### LTnewLM_19 . polypeptide 417217 419262 . + . ID=LTnewLM_190015400.1:pep;Derives_from=LTnewLM_190015400.1;orthologous_to=LmjF.19.1020_mRNA;ortholog_cluster=OG0001793;product=term%3DtRNA pseudouridine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01416;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_19 Pfam protein_match 418918 419181 . + . Parent=LTnewLM_190015400.1:pep;Name=PF01416;signature_desc=tRNA pseudouridine synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_19 AUGUSTUS gene 420444 421331 1 + . ID=LTnewLM_190015500 LTnewLM_19 AUGUSTUS mRNA 420444 421331 1 + . ID=LTnewLM_190015500.1;Parent=LTnewLM_190015500 LTnewLM_19 AUGUSTUS CDS 420444 421331 1 + 0 ID=LTnewLM_190015500.1:CDS:1;Parent=LTnewLM_190015500.1 ### LTnewLM_19 . polypeptide 420444 421331 . + . ID=LTnewLM_190015500.1:pep;Derives_from=LTnewLM_190015500.1;orthologous_to=LmjF.19.1030_mRNA;ortholog_cluster=OG0001794;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 422198 424099 1 + . ID=LTnewLM_190015600 LTnewLM_19 AUGUSTUS mRNA 422198 424099 1 + . ID=LTnewLM_190015600.1;Parent=LTnewLM_190015600 LTnewLM_19 AUGUSTUS CDS 422198 424099 1 + 0 ID=LTnewLM_190015600.1:CDS:1;Parent=LTnewLM_190015600.1 ### LTnewLM_19 . polypeptide 422198 424099 . + . ID=LTnewLM_190015600.1:pep;Derives_from=LTnewLM_190015600.1;orthologous_to=LmjF.19.1040_mRNA;ortholog_cluster=OG0001795;product=term%3DPhe-tRNA synthetase beta subunit B1 domain/B3/4 domain/tRNA synthetase B5 domain/Phenylalanyl tRNA synthetase beta chain CLM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18262|Pfam:PF03483|Pfam:PF03484|Pfam:PF17759;Ontology_term=GO:0003723,GO:0004826,GO:0005524,GO:0000287,GO:0006432 LTnewLM_19 Pfam protein_match 422198 422488 . + . Parent=LTnewLM_190015600.1:pep;Name=PF18262;signature_desc=Phe-tRNA synthetase beta subunit B1 domain LTnewLM_19 Pfam protein_match 422576 423010 . + . Parent=LTnewLM_190015600.1:pep;Name=PF03483;signature_desc=B3/4 domain;Ontology_term=GO:0003723,GO:0004826 LTnewLM_19 Pfam protein_match 423170 423370 . + . Parent=LTnewLM_190015600.1:pep;Name=PF03484;signature_desc=tRNA synthetase B5 domain;Ontology_term=GO:0000287,GO:0003723,GO:0005524,GO:0006432 LTnewLM_19 Pfam protein_match 423416 424072 . + . Parent=LTnewLM_190015600.1:pep;Name=PF17759;signature_desc=Phenylalanyl tRNA synthetase beta chain CLM domain ### LTnewLM_19 AUGUSTUS gene 426292 430401 1 + . ID=LTnewLM_190015700 LTnewLM_19 AUGUSTUS mRNA 426292 430401 1 + . ID=LTnewLM_190015700.1;Parent=LTnewLM_190015700 LTnewLM_19 AUGUSTUS CDS 426292 427123 1 + 0 ID=LTnewLM_190015700.1:CDS:1;Parent=LTnewLM_190015700.1 LTnewLM_19 AUGUSTUS CDS 427199 430401 1 + 2 ID=LTnewLM_190015700.1:CDS:2;Parent=LTnewLM_190015700.1 ### LTnewLM_19 . polypeptide 426292 430401 . + . ID=LTnewLM_190015700.1:pep;Derives_from=LTnewLM_190015700.1;orthologous_to=LmjF.19.1050_mRNA;ortholog_cluster=OG0001796;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 431768 435532 1 + . ID=LTnewLM_190015800 LTnewLM_19 AUGUSTUS mRNA 431768 435532 1 + . ID=LTnewLM_190015800.1;Parent=LTnewLM_190015800 LTnewLM_19 AUGUSTUS CDS 431768 435532 1 + 0 ID=LTnewLM_190015800.1:CDS:1;Parent=LTnewLM_190015800.1 ### LTnewLM_19 . polypeptide 431768 435532 . + . ID=LTnewLM_190015800.1:pep;Derives_from=LTnewLM_190015800.1;orthologous_to=LmjF.19.1060_mRNA;ortholog_cluster=OG0001797;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 440433 443333 1 + . ID=LTnewLM_190015900 LTnewLM_19 AUGUSTUS mRNA 440433 443333 1 + . ID=LTnewLM_190015900.1;Parent=LTnewLM_190015900 LTnewLM_19 AUGUSTUS CDS 440433 443333 1 + 0 ID=LTnewLM_190015900.1:CDS:1;Parent=LTnewLM_190015900.1 ### LTnewLM_19 . polypeptide 440433 443333 . + . ID=LTnewLM_190015900.1:pep;Derives_from=LTnewLM_190015900.1;orthologous_to=LmjF.19.1070_mRNA;ortholog_cluster=OG0001798;product=term%3DDiacylglycerol kinase catalytic domain/YegS C-terminal NAD kinase beta sandwich-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00781|Pfam:PF19279;Ontology_term=GO:0004143,GO:0007205 LTnewLM_19 Pfam protein_match 441183 441476 . + . Parent=LTnewLM_190015900.1:pep;Name=PF00781;signature_desc=Diacylglycerol kinase catalytic domain;Ontology_term=GO:0004143,GO:0007205 LTnewLM_19 Pfam protein_match 442722 443078 . + . Parent=LTnewLM_190015900.1:pep;Name=PF19279;signature_desc=YegS C-terminal NAD kinase beta sandwich-like domain ### LTnewLM_19 AUGUSTUS gene 445090 456477 2.73 + . ID=LTnewLM_190016000 LTnewLM_19 AUGUSTUS mRNA 445090 456477 1 + . ID=LTnewLM_190016000.1;Parent=LTnewLM_190016000 LTnewLM_19 AUGUSTUS CDS 445090 456477 1 + 0 ID=LTnewLM_190016000.1:CDS:1;Parent=LTnewLM_190016000.1 LTnewLM_19 AUGUSTUS mRNA 449623 456477 0.73 + . ID=LTnewLM_190016000.2;Parent=LTnewLM_190016000 LTnewLM_19 AUGUSTUS CDS 449623 456477 0.73 + 0 ID=LTnewLM_190016000.2:CDS:1;Parent=LTnewLM_190016000.2 LTnewLM_19 AUGUSTUS mRNA 451315 456477 1 + . ID=LTnewLM_190016000.3;Parent=LTnewLM_190016000 LTnewLM_19 AUGUSTUS CDS 451315 456477 1 + 0 ID=LTnewLM_190016000.3:CDS:1;Parent=LTnewLM_190016000.3 ### LTnewLM_19 . polypeptide 445090 456477 . + . ID=LTnewLM_190016000.1:pep;Derives_from=LTnewLM_190016000.1;orthologous_to=LTnewLM_190016000.2,LTnewLM_190016000.3,LmjF.19.1080_mRNA;ortholog_cluster=OG0000141;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . polypeptide 449623 456477 . + . ID=LTnewLM_190016000.2:pep;Derives_from=LTnewLM_190016000.2;orthologous_to=LTnewLM_190016000.1,LTnewLM_190016000.3,LmjF.19.1080_mRNA;ortholog_cluster=OG0000141;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . polypeptide 451315 456477 . + . ID=LTnewLM_190016000.3:pep;Derives_from=LTnewLM_190016000.3;orthologous_to=LTnewLM_190016000.1,LTnewLM_190016000.2,LmjF.19.1080_mRNA;ortholog_cluster=OG0000141;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . pseudogene 456841 457448 . + . ID=LTnewLM_190016100:pseudogene;coverage=0.921;sequence_ID=0.843;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.1090_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 456841 457448 . + . ID=LTnewLM_190016100.1;Parent=LTnewLM_190016100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 456841 457448 . + . ID=LTnewLM_190016100.1:pseudogenic_exon:1;Parent=LTnewLM_190016100.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 456841 457448 . + . ID=LTnewLM_190016100.1:pep;Derives_from=LTnewLM_190016100.1;orthologous_to=LmjF.19.1090_mRNA;ortholog_cluster=OG0007492;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 459540 463493 1 + . ID=LTnewLM_190016200 LTnewLM_19 AUGUSTUS mRNA 459540 463493 1 + . ID=LTnewLM_190016200.1;Parent=LTnewLM_190016200 LTnewLM_19 AUGUSTUS CDS 459540 463493 1 + 0 ID=LTnewLM_190016200.1:CDS:1;Parent=LTnewLM_190016200.1 ### LTnewLM_19 . polypeptide 459540 463493 . + . ID=LTnewLM_190016200.1:pep;Derives_from=LTnewLM_190016200.1;orthologous_to=LmjF.19.1100_mRNA;ortholog_cluster=OG0001799;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 466087 467121 1 + . ID=LTnewLM_190016300 LTnewLM_19 AUGUSTUS mRNA 466087 467121 1 + . ID=LTnewLM_190016300.1;Parent=LTnewLM_190016300 LTnewLM_19 AUGUSTUS CDS 466087 467121 1 + 0 ID=LTnewLM_190016300.1:CDS:1;Parent=LTnewLM_190016300.1 ### LTnewLM_19 . polypeptide 466087 467121 . + . ID=LTnewLM_190016300.1:pep;Derives_from=LTnewLM_190016300.1;orthologous_to=LmjF.19.1110_mRNA;ortholog_cluster=OG0001800;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_19 Pfam protein_match 466111 466368 . + . Parent=LTnewLM_190016300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 466483 466734 . + . Parent=LTnewLM_190016300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_19 Pfam protein_match 466789 467058 . + . Parent=LTnewLM_190016300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_19 AUGUSTUS gene 468324 469562 1 + . ID=LTnewLM_190016400 LTnewLM_19 AUGUSTUS mRNA 468324 469562 1 + . ID=LTnewLM_190016400.1;Parent=LTnewLM_190016400 LTnewLM_19 AUGUSTUS CDS 468324 469562 1 + 0 ID=LTnewLM_190016400.1:CDS:1;Parent=LTnewLM_190016400.1 ### LTnewLM_19 . polypeptide 468324 469562 . + . ID=LTnewLM_190016400.1:pep;Derives_from=LTnewLM_190016400.1;orthologous_to=LmjF.19.1120_mRNA;ortholog_cluster=OG0001801;product=term%3DPCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01399;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 469122 469415 . + . Parent=LTnewLM_190016400.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 471784 489170 0.95 + . ID=LTnewLM_190016500 LTnewLM_19 AUGUSTUS mRNA 471784 489170 0.95 + . ID=LTnewLM_190016500.1;Parent=LTnewLM_190016500 LTnewLM_19 AUGUSTUS CDS 471784 484442 0.98 + 0 ID=LTnewLM_190016500.1:CDS:1;Parent=LTnewLM_190016500.1 LTnewLM_19 AUGUSTUS CDS 484496 489170 0.96 + 1 ID=LTnewLM_190016500.1:CDS:2;Parent=LTnewLM_190016500.1 ### LTnewLM_19 . polypeptide 471784 489170 . + . ID=LTnewLM_190016500.1:pep;Derives_from=LTnewLM_190016500.1;orthologous_to=LmjF.19.1130_mRNA;ortholog_cluster=OG0001802;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 479002 479193 . + . Parent=LTnewLM_190016500.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_19 Pfam protein_match 479026 479109 . + . Parent=LTnewLM_190016500.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 490538 492967 1 + . ID=LTnewLM_190016600 LTnewLM_19 AUGUSTUS mRNA 490538 492967 1 + . ID=LTnewLM_190016600.1;Parent=LTnewLM_190016600 LTnewLM_19 AUGUSTUS CDS 490538 492967 1 + 0 ID=LTnewLM_190016600.1:CDS:1;Parent=LTnewLM_190016600.1 ### LTnewLM_19 . polypeptide 490538 492967 . + . ID=LTnewLM_190016600.1:pep;Derives_from=LTnewLM_190016600.1;orthologous_to=LmjF.19.1140_mRNA;ortholog_cluster=OG0001803;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 494450 502459 1 + . ID=LTnewLM_190016700 LTnewLM_19 AUGUSTUS mRNA 494450 502459 1 + . ID=LTnewLM_190016700.1;Parent=LTnewLM_190016700 LTnewLM_19 AUGUSTUS CDS 494450 502459 1 + 0 ID=LTnewLM_190016700.1:CDS:1;Parent=LTnewLM_190016700.1 ### LTnewLM_19 . polypeptide 494450 502459 . + . ID=LTnewLM_190016700.1:pep;Derives_from=LTnewLM_190016700.1;orthologous_to=LmjF.19.1150_mRNA;ortholog_cluster=OG0001804;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 504098 505207 1 + . ID=LTnewLM_190016800 LTnewLM_19 AUGUSTUS mRNA 504098 505207 1 + . ID=LTnewLM_190016800.1;Parent=LTnewLM_190016800 LTnewLM_19 AUGUSTUS CDS 504098 505207 1 + 0 ID=LTnewLM_190016800.1:CDS:1;Parent=LTnewLM_190016800.1 ### LTnewLM_19 . polypeptide 504098 505207 . + . ID=LTnewLM_190016800.1:pep;Derives_from=LTnewLM_190016800.1;orthologous_to=LmjF.19.1160_mRNA;ortholog_cluster=OG0001805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 507906 510857 0.92 + . ID=LTnewLM_190016900 LTnewLM_19 AUGUSTUS mRNA 507906 510857 0.92 + . ID=LTnewLM_190016900.1;Parent=LTnewLM_190016900 LTnewLM_19 AUGUSTUS CDS 507906 510857 0.92 + 0 ID=LTnewLM_190016900.1:CDS:1;Parent=LTnewLM_190016900.1 ### LTnewLM_19 . polypeptide 507906 510857 . + . ID=LTnewLM_190016900.1:pep;Derives_from=LTnewLM_190016900.1;orthologous_to=LmjF.19.1170_mRNA;ortholog_cluster=OG0001806;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 512373 517675 0.78 + . ID=LTnewLM_190017000 LTnewLM_19 AUGUSTUS mRNA 512373 517675 0.78 + . ID=LTnewLM_190017000.1;Parent=LTnewLM_190017000 LTnewLM_19 AUGUSTUS CDS 512373 517072 0.78 + 0 ID=LTnewLM_190017000.1:CDS:1;Parent=LTnewLM_190017000.1 LTnewLM_19 AUGUSTUS CDS 517147 517675 0.78 + 1 ID=LTnewLM_190017000.1:CDS:2;Parent=LTnewLM_190017000.1 ### LTnewLM_19 . polypeptide 512373 517675 . + . ID=LTnewLM_190017000.1:pep;Derives_from=LTnewLM_190017000.1;orthologous_to=LmjF.19.1180_mRNA;ortholog_cluster=OG0001807;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 518653 519045 1 + . ID=LTnewLM_190017100 LTnewLM_19 AUGUSTUS mRNA 518653 519045 1 + . ID=LTnewLM_190017100.1;Parent=LTnewLM_190017100 LTnewLM_19 AUGUSTUS CDS 518653 519045 1 + 0 ID=LTnewLM_190017100.1:CDS:1;Parent=LTnewLM_190017100.1 ### LTnewLM_19 . polypeptide 518653 519045 . + . ID=LTnewLM_190017100.1:pep;Derives_from=LTnewLM_190017100.1;orthologous_to=LmjF.19.1190_mRNA;ortholog_cluster=OG0001808;product=term%3DCHCH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06747 LTnewLM_19 Pfam protein_match 518740 518838 . + . Parent=LTnewLM_190017100.1:pep;Name=PF06747;signature_desc=CHCH domain ### LTnewLM_19 AUGUSTUS gene 520383 521825 2 + . ID=LTnewLM_190017200 LTnewLM_19 AUGUSTUS mRNA 520383 521825 1 + . ID=LTnewLM_190017200.1;Parent=LTnewLM_190017200 LTnewLM_19 AUGUSTUS CDS 520383 521825 1 + 0 ID=LTnewLM_190017200.1:CDS:1;Parent=LTnewLM_190017200.1 LTnewLM_19 AUGUSTUS mRNA 521601 521825 1 + . ID=LTnewLM_190017200.2;Parent=LTnewLM_190017200 LTnewLM_19 AUGUSTUS CDS 521601 521825 1 + 0 ID=LTnewLM_190017200.2:CDS:1;Parent=LTnewLM_190017200.2 ### LTnewLM_19 . polypeptide 520383 521825 . + . ID=LTnewLM_190017200.1:pep;Derives_from=LTnewLM_190017200.1;orthologous_to=LTnewLM_190017200.2,LmjF.19.1200_mRNA;ortholog_cluster=OG0000370;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_19 Pfam protein_match 520410 521798 . + . Parent=LTnewLM_190017200.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_19 . polypeptide 521601 521825 . + . ID=LTnewLM_190017200.2:pep;Derives_from=LTnewLM_190017200.2;orthologous_to=LTnewLM_190017200.1,LmjF.19.1200_mRNA;ortholog_cluster=OG0000370;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 522706 523335 1 + . ID=LTnewLM_190017300 LTnewLM_19 AUGUSTUS mRNA 522706 523335 1 + . ID=LTnewLM_190017300.1;Parent=LTnewLM_190017300 LTnewLM_19 AUGUSTUS CDS 522706 523335 1 + 0 ID=LTnewLM_190017300.1:CDS:1;Parent=LTnewLM_190017300.1 ### LTnewLM_19 . polypeptide 522706 523335 . + . ID=LTnewLM_190017300.1:pep;Derives_from=LTnewLM_190017300.1;orthologous_to=LmjF.19.1210_mRNA;ortholog_cluster=OG0001809;product=term%3DPIN like domain/Fcf1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18477|Pfam:PF04900;Ontology_term=GO:0032040 LTnewLM_19 Pfam protein_match 522955 523275 . + . Parent=LTnewLM_190017300.1:pep;Name=PF18477;signature_desc=PIN like domain LTnewLM_19 Pfam protein_match 523021 523302 . + . Parent=LTnewLM_190017300.1:pep;Name=PF04900;signature_desc=Fcf1;Ontology_term=GO:0032040 ### LTnewLM_19 AUGUSTUS gene 524342 525223 1 + . ID=LTnewLM_190017400 LTnewLM_19 AUGUSTUS mRNA 524342 525223 1 + . ID=LTnewLM_190017400.1;Parent=LTnewLM_190017400 LTnewLM_19 AUGUSTUS CDS 524342 525223 1 + 0 ID=LTnewLM_190017400.1:CDS:1;Parent=LTnewLM_190017400.1 ### LTnewLM_19 . polypeptide 524342 525223 . + . ID=LTnewLM_190017400.1:pep;Derives_from=LTnewLM_190017400.1;orthologous_to=LmjF.19.1220_mRNA;ortholog_cluster=OG0001810;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 527396 528562 1 + . ID=LTnewLM_190017500 LTnewLM_19 AUGUSTUS mRNA 527396 528562 1 + . ID=LTnewLM_190017500.1;Parent=LTnewLM_190017500 LTnewLM_19 AUGUSTUS CDS 527396 528562 1 + 0 ID=LTnewLM_190017500.1:CDS:1;Parent=LTnewLM_190017500.1 ### LTnewLM_19 . polypeptide 527396 528562 . + . ID=LTnewLM_190017500.1:pep;Derives_from=LTnewLM_190017500.1;orthologous_to=LmjF.19.1230_mRNA;ortholog_cluster=OG0001811;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 . pseudogene 529345 536531 . + . ID=LTnewLM_190017600:pseudogene;coverage=0.994;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.1240_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 529345 536531 . + . ID=LTnewLM_190017600.1;Parent=LTnewLM_190017600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 530597 536531 . + . ID=LTnewLM_190017600.1:pseudogenic_exon:1;Parent=LTnewLM_190017600.1;extra_copy_number=0 LTnewLM_19 . pseudogenic_transcript 530961 536531 . + . ID=LTnewLM_190017600.2;Parent=LTnewLM_190017600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 531133 536531 . + . ID=LTnewLM_190017600.2:pseudogenic_exon:1;Parent=LTnewLM_190017600.2;extra_copy_number=0 ### LTnewLM_19 . polypeptide 530597 536531 . + . ID=LTnewLM_190017600.1:pep;Derives_from=LTnewLM_190017600.1;product=term%3Dhypothetical protein ### LTnewLM_19 . polypeptide 531133 536531 . + . ID=LTnewLM_190017600.2:pep;Derives_from=LTnewLM_190017600.2;product=term%3Dhypothetical protein ### LTnewLM_19 AUGUSTUS gene 531156 536531 1 + . ID=LTnewLM_190017700 LTnewLM_19 AUGUSTUS mRNA 531156 536531 1 + . ID=LTnewLM_190017700.1;Parent=LTnewLM_190017700 LTnewLM_19 AUGUSTUS CDS 531156 536531 1 + 0 ID=LTnewLM_190017700.1:CDS:1;Parent=LTnewLM_190017700.1 ### LTnewLM_19 . polypeptide 531156 536531 . + . ID=LTnewLM_190017700.1:pep;Derives_from=LTnewLM_190017700.1;orthologous_to=LmjF.19.1240.1_mRNA,LmjF.19.1240.2_mRNA;ortholog_cluster=OG0000371;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 537722 539107 1 + . ID=LTnewLM_190017800 LTnewLM_19 AUGUSTUS mRNA 537722 539107 1 + . ID=LTnewLM_190017800.1;Parent=LTnewLM_190017800 LTnewLM_19 AUGUSTUS CDS 537722 539107 1 + 0 ID=LTnewLM_190017800.1:CDS:1;Parent=LTnewLM_190017800.1 ### LTnewLM_19 . polypeptide 537722 539107 . + . ID=LTnewLM_190017800.1:pep;Derives_from=LTnewLM_190017800.1;orthologous_to=LmjF.19.1250_mRNA;ortholog_cluster=OG0001812;product=term%3DPex2 / Pex12 amino terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04757 LTnewLM_19 Pfam protein_match 537800 538813 . + . Parent=LTnewLM_190017800.1:pep;Name=PF04757;signature_desc=Pex2 / Pex12 amino terminal region ### LTnewLM_19 AUGUSTUS gene 540390 540905 1 + . ID=LTnewLM_190017900 LTnewLM_19 AUGUSTUS mRNA 540390 540905 1 + . ID=LTnewLM_190017900.1;Parent=LTnewLM_190017900 LTnewLM_19 AUGUSTUS CDS 540390 540905 1 + 0 ID=LTnewLM_190017900.1:CDS:1;Parent=LTnewLM_190017900.1 ### LTnewLM_19 . polypeptide 540390 540905 . + . ID=LTnewLM_190017900.1:pep;Derives_from=LTnewLM_190017900.1;orthologous_to=LmjF.19.1260_mRNA;ortholog_cluster=OG0001813;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 541507 542190 1 + . ID=LTnewLM_190018000 LTnewLM_19 AUGUSTUS mRNA 541507 542190 1 + . ID=LTnewLM_190018000.1;Parent=LTnewLM_190018000 LTnewLM_19 AUGUSTUS CDS 541507 542190 1 + 0 ID=LTnewLM_190018000.1:CDS:1;Parent=LTnewLM_190018000.1 ### LTnewLM_19 . polypeptide 541507 542190 . + . ID=LTnewLM_190018000.1:pep;Derives_from=LTnewLM_190018000.1;orthologous_to=LmjF.19.1270_mRNA;ortholog_cluster=OG0001814;product=term%3DSurp module%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01805;Ontology_term=GO:0003723,GO:0006396 LTnewLM_19 Pfam protein_match 541588 541743 . + . Parent=LTnewLM_190018000.1:pep;Name=PF01805;signature_desc=Surp module;Ontology_term=GO:0003723,GO:0006396 ### LTnewLM_19 AUGUSTUS gene 542990 543823 1 + . ID=LTnewLM_190018100 LTnewLM_19 AUGUSTUS mRNA 542990 543823 1 + . ID=LTnewLM_190018100.1;Parent=LTnewLM_190018100 LTnewLM_19 AUGUSTUS CDS 542990 543823 1 + 0 ID=LTnewLM_190018100.1:CDS:1;Parent=LTnewLM_190018100.1 ### LTnewLM_19 . polypeptide 542990 543823 . + . ID=LTnewLM_190018100.1:pep;Derives_from=LTnewLM_190018100.1;orthologous_to=LmjF.19.1280_mRNA;ortholog_cluster=OG0001815;product=term%3DSPFH domain / Band 7 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01145 LTnewLM_19 Pfam protein_match 543008 543517 . + . Parent=LTnewLM_190018100.1:pep;Name=PF01145;signature_desc=SPFH domain / Band 7 family ### LTnewLM_19 AUGUSTUS gene 545964 546815 1 + . ID=LTnewLM_190018200 LTnewLM_19 AUGUSTUS mRNA 545964 546815 1 + . ID=LTnewLM_190018200.1;Parent=LTnewLM_190018200 LTnewLM_19 AUGUSTUS CDS 545964 546815 1 + 0 ID=LTnewLM_190018200.1:CDS:1;Parent=LTnewLM_190018200.1 ### LTnewLM_19 . polypeptide 545964 546815 . + . ID=LTnewLM_190018200.1:pep;Derives_from=LTnewLM_190018200.1;orthologous_to=LmjF.19.1290_mRNA;ortholog_cluster=OG0001816;product=term%3DSPFH domain / Band 7 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01145 LTnewLM_19 Pfam protein_match 545988 546491 . + . Parent=LTnewLM_190018200.1:pep;Name=PF01145;signature_desc=SPFH domain / Band 7 family ### LTnewLM_19 AUGUSTUS gene 548507 551062 1 + . ID=LTnewLM_190018300 LTnewLM_19 AUGUSTUS mRNA 548507 551062 1 + . ID=LTnewLM_190018300.1;Parent=LTnewLM_190018300 LTnewLM_19 AUGUSTUS CDS 548507 551062 1 + 0 ID=LTnewLM_190018300.1:CDS:1;Parent=LTnewLM_190018300.1 ### LTnewLM_19 . polypeptide 548507 551062 . + . ID=LTnewLM_190018300.1:pep;Derives_from=LTnewLM_190018300.1;orthologous_to=LmjF.19.1300_mRNA;ortholog_cluster=OG0001817;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 554447 557377 1 + . ID=LTnewLM_190018400 LTnewLM_19 AUGUSTUS mRNA 554447 557377 1 + . ID=LTnewLM_190018400.1;Parent=LTnewLM_190018400 LTnewLM_19 AUGUSTUS CDS 554447 557377 1 + 0 ID=LTnewLM_190018400.1:CDS:1;Parent=LTnewLM_190018400.1 ### LTnewLM_19 . polypeptide 554447 557377 . + . ID=LTnewLM_190018400.1:pep;Derives_from=LTnewLM_190018400.1;orthologous_to=LmjF.19.1310_mRNA;ortholog_cluster=OG0001818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 559518 559733 1 + . ID=LTnewLM_190018500 LTnewLM_19 AUGUSTUS mRNA 559518 559733 1 + . ID=LTnewLM_190018500.1;Parent=LTnewLM_190018500 LTnewLM_19 AUGUSTUS CDS 559518 559733 1 + 0 ID=LTnewLM_190018500.1:CDS:1;Parent=LTnewLM_190018500.1 ### LTnewLM_19 . polypeptide 559518 559733 . + . ID=LTnewLM_190018500.1:pep;Derives_from=LTnewLM_190018500.1;product=term%3Dhypothetical protein ### LTnewLM_19 AUGUSTUS gene 562873 566936 0.6 + . ID=LTnewLM_190018600 LTnewLM_19 AUGUSTUS mRNA 562873 566936 0.6 + . ID=LTnewLM_190018600.1;Parent=LTnewLM_190018600 LTnewLM_19 AUGUSTUS CDS 562873 563186 0.74 + 0 ID=LTnewLM_190018600.1:CDS:1;Parent=LTnewLM_190018600.1 LTnewLM_19 AUGUSTUS CDS 565493 566936 0.75 + 1 ID=LTnewLM_190018600.1:CDS:2;Parent=LTnewLM_190018600.1 ### LTnewLM_19 . polypeptide 562873 566936 . + . ID=LTnewLM_190018600.1:pep;Derives_from=LTnewLM_190018600.1;orthologous_to=LmjF.19.1320_mRNA;ortholog_cluster=OG0001819;product=term%3DMBOAT%2C membrane-bound O-acyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03062 LTnewLM_19 Pfam protein_match 563752 564396 . + . Parent=LTnewLM_190018600.1:pep;Name=PF03062;signature_desc=MBOAT%2C membrane-bound O-acyltransferase family ### LTnewLM_19 AUGUSTUS gene 569378 571900 1 + . ID=LTnewLM_190018700 LTnewLM_19 AUGUSTUS mRNA 569378 571900 1 + . ID=LTnewLM_190018700.1;Parent=LTnewLM_190018700 LTnewLM_19 AUGUSTUS CDS 569378 571900 1 + 0 ID=LTnewLM_190018700.1:CDS:1;Parent=LTnewLM_190018700.1 ### LTnewLM_19 . polypeptide 569378 571900 . + . ID=LTnewLM_190018700.1:pep;Derives_from=LTnewLM_190018700.1;orthologous_to=LmjF.19.1000_mRNA;ortholog_cluster=OG0001820;product=term%3DMBOAT%2C membrane-bound O-acyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03062 LTnewLM_19 Pfam protein_match 570746 571393 . + . Parent=LTnewLM_190018700.1:pep;Name=PF03062;signature_desc=MBOAT%2C membrane-bound O-acyltransferase family ### LTnewLM_19 . pseudogene 574430 576664 . + . ID=LTnewLM_190018800:pseudogene;coverage=0.990;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.1330_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 574430 576664 . + . ID=LTnewLM_190018800.1;Parent=LTnewLM_190018800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 574430 576664 . + . ID=LTnewLM_190018800.1:pseudogenic_exon:1;Parent=LTnewLM_190018800.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 574430 576664 . + . ID=LTnewLM_190018800.1:pep;Derives_from=LTnewLM_190018800.1;orthologous_to=LTnewLM_190018900.1,LmjF.19.1330_mRNA,LmjF.19.1340_mRNA,LmjF.19.1345_mRNA;ortholog_cluster=OG0000101;product=term%3DMBOAT%2C membrane-bound O-acyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03062 LTnewLM_19 Pfam protein_match 575549 576193 . + . Parent=LTnewLM_190018800.1:pep;Name=PF03062;signature_desc=MBOAT%2C membrane-bound O-acyltransferase family ### LTnewLM_19 . pseudogene 577699 580035 . + . ID=LTnewLM_190018900:pseudogene;coverage=1.0;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.1345_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 577699 580035 . + . ID=LTnewLM_190018900.1;Parent=LTnewLM_190018900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 577699 580035 . + . ID=LTnewLM_190018900.1:pseudogenic_exon:1;Parent=LTnewLM_190018900.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 577699 580035 . + . ID=LTnewLM_190018900.1:pep;Derives_from=LTnewLM_190018900.1;orthologous_to=LTnewLM_190018800.1,LmjF.19.1330_mRNA,LmjF.19.1340_mRNA,LmjF.19.1345_mRNA;ortholog_cluster=OG0000101;product=term%3DMBOAT%2C membrane-bound O-acyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03062 LTnewLM_19 Pfam protein_match 578923 579564 . + . Parent=LTnewLM_190018900.1:pep;Name=PF03062;signature_desc=MBOAT%2C membrane-bound O-acyltransferase family ### LTnewLM_19 Liftoff gene 582400 585238 . + . ID=LTnewLM_190019000;coverage=0.993;sequence_ID=0.917;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.19.1347_0 LTnewLM_19 Liftoff mRNA 582400 585238 . + . ID=LTnewLM_190019000.1;Parent=LTnewLM_190019000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_19 Liftoff five_prime_UTR 582400 582970 . + . ID=LTnewLM_190019000:five_prime_UTR;Parent=LTnewLM_190019000.1;extra_copy_number=0 LTnewLM_19 Liftoff CDS 582971 585238 . + 0 ID=LTnewLM_190019000.1:CDS:1;Parent=LTnewLM_190019000.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 582971 585238 . + . ID=LTnewLM_190019000.1:pep;Derives_from=LTnewLM_190019000.1;orthologous_to=LmjF.19.1347_mRNA;ortholog_cluster=OG0001821;product=term%3DMBOAT%2C membrane-bound O-acyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03062 LTnewLM_19 Pfam protein_match 584597 584974 . + . Parent=LTnewLM_190019000.1:pep;Name=PF03062;signature_desc=MBOAT%2C membrane-bound O-acyltransferase family ### LTnewLM_19 AUGUSTUS gene 587184 587480 1 - . ID=LTnewLM_190019100 LTnewLM_19 AUGUSTUS mRNA 587184 587480 1 - . ID=LTnewLM_190019100.1;Parent=LTnewLM_190019100 LTnewLM_19 AUGUSTUS CDS 587184 587480 1 - 0 ID=LTnewLM_190019100.1:CDS:1;Parent=LTnewLM_190019100.1 ### LTnewLM_19 . polypeptide 587184 587480 . - . ID=LTnewLM_190019100.1:pep;Derives_from=LTnewLM_190019100.1;product=term%3Dhypothetical protein ### LTnewLM_19 AUGUSTUS gene 587756 588276 0.41 - . ID=LTnewLM_190019200 LTnewLM_19 AUGUSTUS mRNA 587756 588276 0.41 - . ID=LTnewLM_190019200.1;Parent=LTnewLM_190019200 LTnewLM_19 AUGUSTUS CDS 587756 587954 0.41 - 1 ID=LTnewLM_190019200.1:CDS:1;Parent=LTnewLM_190019200.1 LTnewLM_19 AUGUSTUS CDS 588020 588276 0.49 - 0 ID=LTnewLM_190019200.1:CDS:2;Parent=LTnewLM_190019200.1 ### LTnewLM_19 . polypeptide 587756 588276 . - . ID=LTnewLM_190019200.1:pep;Derives_from=LTnewLM_190019200.1;orthologous_to=LTnewLM_230013500.1,LTnewLM_230013500.2,LTnewLM_270022100.1,LTnewLM_350016500.1,LTnewLM_360029300.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 588602 588955 1 - . ID=LTnewLM_190019300 LTnewLM_19 AUGUSTUS mRNA 588602 588955 1 - . ID=LTnewLM_190019300.1;Parent=LTnewLM_190019300 LTnewLM_19 AUGUSTUS CDS 588602 588955 1 - 0 ID=LTnewLM_190019300.1:CDS:1;Parent=LTnewLM_190019300.1 ### LTnewLM_19 . polypeptide 588602 588955 . - . ID=LTnewLM_190019300.1:pep;Derives_from=LTnewLM_190019300.1;orthologous_to=LTnewLM_300020300.1,LTnewLM_300020600.1,LTnewLM_300020900.1,LTnewLM_300021200.1;ortholog_cluster=OG0000084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 590500 591702 1 + . ID=LTnewLM_190019400 LTnewLM_19 AUGUSTUS mRNA 590500 591702 1 + . ID=LTnewLM_190019400.1;Parent=LTnewLM_190019400 LTnewLM_19 AUGUSTUS CDS 590500 591702 1 + 0 ID=LTnewLM_190019400.1:CDS:1;Parent=LTnewLM_190019400.1 ### LTnewLM_19 . polypeptide 590500 591702 . + . ID=LTnewLM_190019400.1:pep;Derives_from=LTnewLM_190019400.1;orthologous_to=LmjF.19.1350_mRNA;ortholog_cluster=OG0001822;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_19 Pfam protein_match 590935 591384 . + . Parent=LTnewLM_190019400.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_19 AUGUSTUS gene 593204 593470 1 + . ID=LTnewLM_190019500 LTnewLM_19 AUGUSTUS mRNA 593204 593470 1 + . ID=LTnewLM_190019500.1;Parent=LTnewLM_190019500 LTnewLM_19 AUGUSTUS CDS 593204 593470 1 + 0 ID=LTnewLM_190019500.1:CDS:1;Parent=LTnewLM_190019500.1 ### LTnewLM_19 . polypeptide 593204 593470 . + . ID=LTnewLM_190019500.1:pep;Derives_from=LTnewLM_190019500.1;orthologous_to=LmjF.19.1360_mRNA;ortholog_cluster=OG0001823;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 595134 595628 1 + . ID=LTnewLM_190019600 LTnewLM_19 AUGUSTUS mRNA 595134 595628 1 + . ID=LTnewLM_190019600.1;Parent=LTnewLM_190019600 LTnewLM_19 AUGUSTUS CDS 595134 595628 1 + 0 ID=LTnewLM_190019600.1:CDS:1;Parent=LTnewLM_190019600.1 ### LTnewLM_19 . polypeptide 595134 595628 . + . ID=LTnewLM_190019600.1:pep;Derives_from=LTnewLM_190019600.1;orthologous_to=LmjF.19.1365_mRNA;ortholog_cluster=OG0001824;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 597722 599944 1 + . ID=LTnewLM_190019700 LTnewLM_19 AUGUSTUS mRNA 597722 599944 1 + . ID=LTnewLM_190019700.1;Parent=LTnewLM_190019700 LTnewLM_19 AUGUSTUS CDS 597722 599944 1 + 0 ID=LTnewLM_190019700.1:CDS:1;Parent=LTnewLM_190019700.1 ### LTnewLM_19 . polypeptide 597722 599944 . + . ID=LTnewLM_190019700.1:pep;Derives_from=LTnewLM_190019700.1;orthologous_to=LmjF.19.1370_mRNA;ortholog_cluster=OG0001825;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 603428 605287 1 + . ID=LTnewLM_190019800 LTnewLM_19 AUGUSTUS mRNA 603428 605287 1 + . ID=LTnewLM_190019800.1;Parent=LTnewLM_190019800 LTnewLM_19 AUGUSTUS CDS 603428 605287 1 + 0 ID=LTnewLM_190019800.1:CDS:1;Parent=LTnewLM_190019800.1 ### LTnewLM_19 . polypeptide 603428 605287 . + . ID=LTnewLM_190019800.1:pep;Derives_from=LTnewLM_190019800.1;orthologous_to=LmjF.19.1380_mRNA;ortholog_cluster=OG0001826;product=term%3DCation efflux family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01545;Ontology_term=GO:0006812,GO:0008324,GO:0055085,GO:0016021 LTnewLM_19 Pfam protein_match 603617 603946 . + . Parent=LTnewLM_190019800.1:pep;Name=PF01545;signature_desc=Cation efflux family;Ontology_term=GO:0008324,GO:0006812,GO:0055085,GO:0016021 LTnewLM_19 Pfam protein_match 604142 604411 . + . Parent=LTnewLM_190019800.1:pep;Name=PF01545;signature_desc=Cation efflux family;Ontology_term=GO:0008324,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_19 AUGUSTUS gene 606431 607312 1 + . ID=LTnewLM_190019900 LTnewLM_19 AUGUSTUS mRNA 606431 607312 1 + . ID=LTnewLM_190019900.1;Parent=LTnewLM_190019900 LTnewLM_19 AUGUSTUS CDS 606431 607312 1 + 0 ID=LTnewLM_190019900.1:CDS:1;Parent=LTnewLM_190019900.1 ### LTnewLM_19 . polypeptide 606431 607312 . + . ID=LTnewLM_190019900.1:pep;Derives_from=LTnewLM_190019900.1;orthologous_to=LmjF.19.1390_mRNA;ortholog_cluster=OG0001827;product=term%3DTranscription factor TFIID (or TATA-binding protein%2C TBP)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00352;Ontology_term=GO:0006352,GO:0003677 LTnewLM_19 Pfam protein_match 606713 606952 . + . Parent=LTnewLM_190019900.1:pep;Name=PF00352;signature_desc=Transcription factor TFIID (or TATA-binding protein%2C TBP);Ontology_term=GO:0003677,GO:0006352 LTnewLM_19 Pfam protein_match 606983 607282 . + . Parent=LTnewLM_190019900.1:pep;Name=PF00352;signature_desc=Transcription factor TFIID (or TATA-binding protein%2C TBP);Ontology_term=GO:0003677,GO:0006352 ### LTnewLM_19 AUGUSTUS gene 608171 608857 1 + . ID=LTnewLM_190020000 LTnewLM_19 AUGUSTUS mRNA 608171 608857 1 + . ID=LTnewLM_190020000.1;Parent=LTnewLM_190020000 LTnewLM_19 AUGUSTUS CDS 608171 608857 1 + 0 ID=LTnewLM_190020000.1:CDS:1;Parent=LTnewLM_190020000.1 ### LTnewLM_19 . polypeptide 608171 608857 . + . ID=LTnewLM_190020000.1:pep;Derives_from=LTnewLM_190020000.1;orthologous_to=LmjF.19.1400_mRNA;ortholog_cluster=OG0001828;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 608717 608788 . + . Parent=LTnewLM_190020000.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 611072 613873 1 + . ID=LTnewLM_190020100 LTnewLM_19 AUGUSTUS mRNA 611072 613873 1 + . ID=LTnewLM_190020100.1;Parent=LTnewLM_190020100 LTnewLM_19 AUGUSTUS CDS 611072 613873 1 + 0 ID=LTnewLM_190020100.1:CDS:1;Parent=LTnewLM_190020100.1 ### LTnewLM_19 . polypeptide 611072 613873 . + . ID=LTnewLM_190020100.1:pep;Derives_from=LTnewLM_190020100.1;orthologous_to=LmjF.19.1410_mRNA;ortholog_cluster=OG0001829;product=term%3DCid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03828 LTnewLM_19 Pfam protein_match 612503 612709 . + . Parent=LTnewLM_190020100.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase ### LTnewLM_19 AUGUSTUS gene 615009 616073 1 + . ID=LTnewLM_190020200 LTnewLM_19 AUGUSTUS mRNA 615009 616073 1 + . ID=LTnewLM_190020200.1;Parent=LTnewLM_190020200 LTnewLM_19 AUGUSTUS CDS 615009 616073 1 + 0 ID=LTnewLM_190020200.1:CDS:1;Parent=LTnewLM_190020200.1 ### LTnewLM_19 . polypeptide 615009 616073 . + . ID=LTnewLM_190020200.1:pep;Derives_from=LTnewLM_190020200.1;orthologous_to=LmjF.19.1420_mRNA;ortholog_cluster=OG0001830;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112;Ontology_term=GO:0008234,GO:0006508 LTnewLM_19 Pfam protein_match 615138 615302 . + . Parent=LTnewLM_190020200.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) LTnewLM_19 Pfam protein_match 615402 616022 . + . Parent=LTnewLM_190020200.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 ### LTnewLM_19 AUGUSTUS gene 616104 616427 1 + . ID=LTnewLM_190020300 LTnewLM_19 AUGUSTUS mRNA 616104 616427 1 + . ID=LTnewLM_190020300.1;Parent=LTnewLM_190020300 LTnewLM_19 AUGUSTUS CDS 616104 616427 1 + 0 ID=LTnewLM_190020300.1:CDS:1;Parent=LTnewLM_190020300.1 ### LTnewLM_19 . polypeptide 616104 616427 . + . ID=LTnewLM_190020300.1:pep;Derives_from=LTnewLM_190020300.1;product=term%3DProtein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12131;Ontology_term=GO:0004197 LTnewLM_19 Pfam protein_match 616113 616256 . + . Parent=LTnewLM_190020300.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 ### LTnewLM_19 Liftoff gene 625638 626735 . + . ID=LTnewLM_190020400;coverage=1.0;sequence_ID=0.928;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.19.1430_0 LTnewLM_19 Liftoff mRNA 625638 626735 . + . ID=LTnewLM_190020400.1;Parent=LTnewLM_190020400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_19 Liftoff CDS 625638 626735 . + 0 ID=LTnewLM_190020400.1:CDS:1;Parent=LTnewLM_190020400.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 625638 626735 . + . ID=LTnewLM_190020400.1:pep;Derives_from=LTnewLM_190020400.1;orthologous_to=LmjF.19.1430_mRNA;ortholog_cluster=OG0001831;product=term%3DPIH1 N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08190 LTnewLM_19 Pfam protein_match 625677 626015 . + . Parent=LTnewLM_190020400.1:pep;Name=PF08190;signature_desc=PIH1 N-terminal domain ### LTnewLM_19 AUGUSTUS gene 627025 628116 1 + . ID=LTnewLM_190020500 LTnewLM_19 AUGUSTUS mRNA 627025 628116 1 + . ID=LTnewLM_190020500.1;Parent=LTnewLM_190020500 LTnewLM_19 AUGUSTUS CDS 627025 628116 1 + 0 ID=LTnewLM_190020500.1:CDS:1;Parent=LTnewLM_190020500.1 ### LTnewLM_19 . polypeptide 627025 628116 . + . ID=LTnewLM_190020500.1:pep;Derives_from=LTnewLM_190020500.1;orthologous_to=LmjF.19.1440_mRNA;ortholog_cluster=OG0001832;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_19 Pfam protein_match 627112 627975 . + . Parent=LTnewLM_190020500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 627118 627717 . + . Parent=LTnewLM_190020500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_19 Pfam protein_match 627370 627690 . + . Parent=LTnewLM_190020500.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_19 AUGUSTUS gene 628510 630264 1 + . ID=LTnewLM_190020600 LTnewLM_19 AUGUSTUS mRNA 628510 630264 1 + . ID=LTnewLM_190020600.1;Parent=LTnewLM_190020600 LTnewLM_19 AUGUSTUS CDS 628510 630264 1 + 0 ID=LTnewLM_190020600.1:CDS:1;Parent=LTnewLM_190020600.1 ### LTnewLM_19 . polypeptide 628510 630264 . + . ID=LTnewLM_190020600.1:pep;Derives_from=LTnewLM_190020600.1;orthologous_to=LmjF.19.1450_mRNA;ortholog_cluster=OG0001833;product=term%3DOxidoreductase-like protein%2C N-terminal/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09791|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_19 Pfam protein_match 628516 628608 . + . Parent=LTnewLM_190020600.1:pep;Name=PF09791;signature_desc=Oxidoreductase-like protein%2C N-terminal LTnewLM_19 Pfam protein_match 629788 630108 . + . Parent=LTnewLM_190020600.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_19 AUGUSTUS gene 630848 631093 1 + . ID=LTnewLM_190020700 LTnewLM_19 AUGUSTUS mRNA 630848 631093 1 + . ID=LTnewLM_190020700.1;Parent=LTnewLM_190020700 LTnewLM_19 AUGUSTUS CDS 630848 631093 1 + 0 ID=LTnewLM_190020700.1:CDS:1;Parent=LTnewLM_190020700.1 ### LTnewLM_19 . polypeptide 630848 631093 . + . ID=LTnewLM_190020700.1:pep;Derives_from=LTnewLM_190020700.1;product=term%3Dhypothetical protein ### LTnewLM_19 AUGUSTUS gene 631471 631824 1 + . ID=LTnewLM_190020800 LTnewLM_19 AUGUSTUS mRNA 631471 631824 1 + . ID=LTnewLM_190020800.1;Parent=LTnewLM_190020800 LTnewLM_19 AUGUSTUS CDS 631471 631824 1 + 0 ID=LTnewLM_190020800.1:CDS:1;Parent=LTnewLM_190020800.1 ### LTnewLM_19 . polypeptide 631471 631824 . + . ID=LTnewLM_190020800.1:pep;Derives_from=LTnewLM_190020800.1;orthologous_to=LmjF.19.1460_mRNA;ortholog_cluster=OG0001834;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 632621 634486 1 + . ID=LTnewLM_190020900 LTnewLM_19 AUGUSTUS mRNA 632621 634486 1 + . ID=LTnewLM_190020900.1;Parent=LTnewLM_190020900 LTnewLM_19 AUGUSTUS CDS 632621 634486 1 + 0 ID=LTnewLM_190020900.1:CDS:1;Parent=LTnewLM_190020900.1 ### LTnewLM_19 . polypeptide 632621 634486 . + . ID=LTnewLM_190020900.1:pep;Derives_from=LTnewLM_190020900.1;orthologous_to=LmjF.19.1470_mRNA;ortholog_cluster=OG0001835;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 633062 633640 . + . Parent=LTnewLM_190020900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_19 Pfam protein_match 633161 633856 . + . Parent=LTnewLM_190020900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_19 Pfam protein_match 633959 634192 . + . Parent=LTnewLM_190020900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 636600 637445 1 + . ID=LTnewLM_190021000 LTnewLM_19 AUGUSTUS mRNA 636600 637445 1 + . ID=LTnewLM_190021000.1;Parent=LTnewLM_190021000 LTnewLM_19 AUGUSTUS CDS 636600 637445 1 + 0 ID=LTnewLM_190021000.1:CDS:1;Parent=LTnewLM_190021000.1 ### LTnewLM_19 . polypeptide 636600 637445 . + . ID=LTnewLM_190021000.1:pep;Derives_from=LTnewLM_190021000.1;orthologous_to=LmjF.19.1480_mRNA,LmjF.19.1500_mRNA;ortholog_cluster=OG0000372;product=term%3DEukaryotic initiation factor 4E%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01652;Ontology_term=GO:0003723,GO:0005737,GO:0006413,GO:0003743 LTnewLM_19 Pfam protein_match 636660 637190 . + . Parent=LTnewLM_190021000.1:pep;Name=PF01652;signature_desc=Eukaryotic initiation factor 4E;Ontology_term=GO:0003723,GO:0003743,GO:0006413,GO:0005737 ### LTnewLM_19 AUGUSTUS gene 638226 638570 1 + . ID=LTnewLM_190021100 LTnewLM_19 AUGUSTUS mRNA 638226 638570 1 + . ID=LTnewLM_190021100.1;Parent=LTnewLM_190021100 LTnewLM_19 AUGUSTUS CDS 638226 638570 1 + 0 ID=LTnewLM_190021100.1:CDS:1;Parent=LTnewLM_190021100.1 ### LTnewLM_19 . polypeptide 638226 638570 . + . ID=LTnewLM_190021100.1:pep;Derives_from=LTnewLM_190021100.1;orthologous_to=LmjF.19.1505_mRNA;ortholog_cluster=OG0001836;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 639866 640831 1 + . ID=LTnewLM_190021200 LTnewLM_19 AUGUSTUS mRNA 639866 640831 1 + . ID=LTnewLM_190021200.1;Parent=LTnewLM_190021200 LTnewLM_19 AUGUSTUS CDS 639866 640831 1 + 0 ID=LTnewLM_190021200.1:CDS:1;Parent=LTnewLM_190021200.1 ### LTnewLM_19 . polypeptide 639866 640831 . + . ID=LTnewLM_190021200.1:pep;Derives_from=LTnewLM_190021200.1;orthologous_to=LmjF.19.1490_mRNA,LmjF.19.1510_mRNA;ortholog_cluster=OG0000373;product=term%3DTriose-phosphate Transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03151 LTnewLM_19 Pfam protein_match 639890 640720 . + . Parent=LTnewLM_190021200.1:pep;Name=PF03151;signature_desc=Triose-phosphate Transporter family ### LTnewLM_19 Liftoff gene 645561 648308 . + . ID=LTnewLM_190021300;coverage=1.0;sequence_ID=0.956;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.19.1520_0 LTnewLM_19 Liftoff mRNA 645561 648308 . + . ID=LTnewLM_190021300.1;Parent=LTnewLM_190021300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_19 Liftoff CDS 645561 648308 . + 0 ID=LTnewLM_190021300.1:CDS:1;Parent=LTnewLM_190021300.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 645561 648308 . + . ID=LTnewLM_190021300.1:pep;Derives_from=LTnewLM_190021300.1;orthologous_to=LmjF.19.1520_mRNA;ortholog_cluster=OG0001837;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 649385 650683 1 + . ID=LTnewLM_190021400 LTnewLM_19 AUGUSTUS mRNA 649385 650683 1 + . ID=LTnewLM_190021400.1;Parent=LTnewLM_190021400 LTnewLM_19 AUGUSTUS CDS 649385 650683 1 + 0 ID=LTnewLM_190021400.1:CDS:1;Parent=LTnewLM_190021400.1 ### LTnewLM_19 . polypeptide 649385 650683 . + . ID=LTnewLM_190021400.1:pep;Derives_from=LTnewLM_190021400.1;orthologous_to=LmjF.19.1530_mRNA;ortholog_cluster=OG0001838;product=term%3DFKBP-type peptidyl-prolyl cis-trans isomerase/Tetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00254|Pfam:PF14559;Ontology_term=GO:0006457 LTnewLM_19 Pfam protein_match 649538 649801 . + . Parent=LTnewLM_190021400.1:pep;Name=PF00254;signature_desc=FKBP-type peptidyl-prolyl cis-trans isomerase;Ontology_term=GO:0006457 LTnewLM_19 Pfam protein_match 650417 650608 . + . Parent=LTnewLM_190021400.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat ### LTnewLM_19 AUGUSTUS gene 655286 657883 1 + . ID=LTnewLM_190021500 LTnewLM_19 AUGUSTUS mRNA 655286 657883 1 + . ID=LTnewLM_190021500.1;Parent=LTnewLM_190021500 LTnewLM_19 AUGUSTUS CDS 655286 657883 1 + 0 ID=LTnewLM_190021500.1:CDS:1;Parent=LTnewLM_190021500.1 ### LTnewLM_19 . polypeptide 655286 657883 . + . ID=LTnewLM_190021500.1:pep;Derives_from=LTnewLM_190021500.1;orthologous_to=LmjF.19.1540_mRNA;ortholog_cluster=OG0001839;product=term%3DCholine/Carnitine o-acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00755;Ontology_term=GO:0016746 LTnewLM_19 Pfam protein_match 655868 657817 . + . Parent=LTnewLM_190021500.1:pep;Name=PF00755;signature_desc=Choline/Carnitine o-acyltransferase;Ontology_term=GO:0016746 ### LTnewLM_19 AUGUSTUS gene 658764 659969 1 + . ID=LTnewLM_190021600 LTnewLM_19 AUGUSTUS mRNA 658764 659969 1 + . ID=LTnewLM_190021600.1;Parent=LTnewLM_190021600 LTnewLM_19 AUGUSTUS CDS 658764 659969 1 + 0 ID=LTnewLM_190021600.1:CDS:1;Parent=LTnewLM_190021600.1 ### LTnewLM_19 . polypeptide 658764 659969 . + . ID=LTnewLM_190021600.1:pep;Derives_from=LTnewLM_190021600.1;orthologous_to=LmjF.19.1550_mRNA;ortholog_cluster=OG0001840;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_19 Pfam protein_match 659214 659327 . + . Parent=LTnewLM_190021600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_19 AUGUSTUS gene 661395 662939 1 + . ID=LTnewLM_190021700 LTnewLM_19 AUGUSTUS mRNA 661395 662939 1 + . ID=LTnewLM_190021700.1;Parent=LTnewLM_190021700 LTnewLM_19 AUGUSTUS CDS 661395 662939 1 + 0 ID=LTnewLM_190021700.1:CDS:1;Parent=LTnewLM_190021700.1 ### LTnewLM_19 . polypeptide 661395 662939 . + . ID=LTnewLM_190021700.1:pep;Derives_from=LTnewLM_190021700.1;orthologous_to=LmjF.19.1560_mRNA;ortholog_cluster=OG0001841;product=term%3DIMP dehydrogenase / GMP reductase domain/CBS domain/FMN-dependent dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00478|Pfam:PF00571|Pfam:PF01070;Ontology_term=GO:0055114,GO:0016491,GO:0003824 LTnewLM_19 Pfam protein_match 661473 662891 . + . Parent=LTnewLM_190021700.1:pep;Name=PF00478;signature_desc=IMP dehydrogenase / GMP reductase domain;Ontology_term=GO:0003824,GO:0055114 LTnewLM_19 Pfam protein_match 661734 661874 . + . Parent=LTnewLM_190021700.1:pep;Name=PF00571;signature_desc=CBS domain LTnewLM_19 Pfam protein_match 661908 662072 . + . Parent=LTnewLM_190021700.1:pep;Name=PF00571;signature_desc=CBS domain LTnewLM_19 Pfam protein_match 662196 662546 . + . Parent=LTnewLM_190021700.1:pep;Name=PF01070;signature_desc=FMN-dependent dehydrogenase;Ontology_term=GO:0016491 ### LTnewLM_19 AUGUSTUS gene 664782 665735 1 + . ID=LTnewLM_190021800 LTnewLM_19 AUGUSTUS mRNA 664782 665735 1 + . ID=LTnewLM_190021800.1;Parent=LTnewLM_190021800 LTnewLM_19 AUGUSTUS CDS 664782 665735 1 + 0 ID=LTnewLM_190021800.1:CDS:1;Parent=LTnewLM_190021800.1 ### LTnewLM_19 . polypeptide 664782 665735 . + . ID=LTnewLM_190021800.1:pep;Derives_from=LTnewLM_190021800.1;orthologous_to=LmjF.19.1570_mRNA;ortholog_cluster=OG0001842;product=term%3DELMO/CED-12 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04727;Ontology_term=GO:0006909,GO:0005856 LTnewLM_19 Pfam protein_match 665115 665651 . + . Parent=LTnewLM_190021800.1:pep;Name=PF04727;signature_desc=ELMO/CED-12 family;Ontology_term=GO:0006909,GO:0005856 ### LTnewLM_19 Liftoff gene 666616 667800 . + . ID=LTnewLM_190021900;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.19.1580_0 LTnewLM_19 Liftoff mRNA 666616 667800 . + . ID=LTnewLM_190021900.1;Parent=LTnewLM_190021900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 Liftoff CDS 666616 667800 . + 0 ID=LTnewLM_190021900.1:CDS:1;Parent=LTnewLM_190021900.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 666616 667800 . + . ID=LTnewLM_190021900.1:pep;Derives_from=LTnewLM_190021900.1;orthologous_to=LmjF.19.1580_mRNA;ortholog_cluster=OG0001843;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 668762 670558 1 + . ID=LTnewLM_190022000 LTnewLM_19 AUGUSTUS mRNA 668762 670558 1 + . ID=LTnewLM_190022000.1;Parent=LTnewLM_190022000 LTnewLM_19 AUGUSTUS CDS 668762 670558 1 + 0 ID=LTnewLM_190022000.1:CDS:1;Parent=LTnewLM_190022000.1 ### LTnewLM_19 . polypeptide 668762 670558 . + . ID=LTnewLM_190022000.1:pep;Derives_from=LTnewLM_190022000.1;orthologous_to=LmjF.19.1590_mRNA;ortholog_cluster=OG0001844;product=term%3DATPase family associated with various cellular activities (AAA)/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF01434;Ontology_term=GO:0004222,GO:0006508,GO:0005524 LTnewLM_19 Pfam protein_match 669221 669616 . + . Parent=LTnewLM_190022000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_19 Pfam protein_match 669866 670411 . + . Parent=LTnewLM_190022000.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 ### LTnewLM_19 AUGUSTUS gene 671399 671899 1 + . ID=LTnewLM_190022100 LTnewLM_19 AUGUSTUS mRNA 671399 671899 1 + . ID=LTnewLM_190022100.1;Parent=LTnewLM_190022100 LTnewLM_19 AUGUSTUS CDS 671399 671899 1 + 0 ID=LTnewLM_190022100.1:CDS:1;Parent=LTnewLM_190022100.1 ### LTnewLM_19 . polypeptide 671399 671899 . + . ID=LTnewLM_190022100.1:pep;Derives_from=LTnewLM_190022100.1;orthologous_to=LmjF.19.1600_mRNA;ortholog_cluster=OG0001845;product=term%3DSRP19 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01922;Ontology_term=GO:0008312,GO:0048500,GO:0006614 LTnewLM_19 Pfam protein_match 671465 671809 . + . Parent=LTnewLM_190022100.1:pep;Name=PF01922;signature_desc=SRP19 protein;Ontology_term=GO:0008312,GO:0006614,GO:0048500 ### LTnewLM_19 AUGUSTUS gene 672700 673632 1 + . ID=LTnewLM_190022200 LTnewLM_19 AUGUSTUS mRNA 672700 673632 1 + . ID=LTnewLM_190022200.1;Parent=LTnewLM_190022200 LTnewLM_19 AUGUSTUS CDS 672700 673632 1 + 0 ID=LTnewLM_190022200.1:CDS:1;Parent=LTnewLM_190022200.1 ### LTnewLM_19 . polypeptide 672700 673632 . + . ID=LTnewLM_190022200.1:pep;Derives_from=LTnewLM_190022200.1;orthologous_to=LmjF.19.1610_mRNA;ortholog_cluster=OG0001846;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_19 Pfam protein_match 673024 673617 . + . Parent=LTnewLM_190022200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_19 AUGUSTUS gene 674093 675019 1 + . ID=LTnewLM_190022300 LTnewLM_19 AUGUSTUS mRNA 674093 675019 1 + . ID=LTnewLM_190022300.1;Parent=LTnewLM_190022300 LTnewLM_19 AUGUSTUS CDS 674093 675019 1 + 0 ID=LTnewLM_190022300.1:CDS:1;Parent=LTnewLM_190022300.1 ### LTnewLM_19 . polypeptide 674093 675019 . + . ID=LTnewLM_190022300.1:pep;Derives_from=LTnewLM_190022300.1;orthologous_to=LmjF.19.1620_mRNA;ortholog_cluster=OG0001847;product=term%3DBTB/POZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02214;Ontology_term=GO:0051260 LTnewLM_19 Pfam protein_match 674105 674389 . + . Parent=LTnewLM_190022300.1:pep;Name=PF02214;signature_desc=BTB/POZ domain;Ontology_term=GO:0051260 ### LTnewLM_19 AUGUSTUS gene 675566 675943 1 + . ID=LTnewLM_190022400 LTnewLM_19 AUGUSTUS mRNA 675566 675943 1 + . ID=LTnewLM_190022400.1;Parent=LTnewLM_190022400 LTnewLM_19 AUGUSTUS CDS 675566 675943 1 + 0 ID=LTnewLM_190022400.1:CDS:1;Parent=LTnewLM_190022400.1 ### LTnewLM_19 . polypeptide 675566 675943 . + . ID=LTnewLM_190022400.1:pep;Derives_from=LTnewLM_190022400.1;orthologous_to=LmjF.19.1630_mRNA;ortholog_cluster=OG0001848;product=term%3DAutophagy protein Atg8 ubiquitin like/Ubiquitin-like autophagy protein Apg12%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991|Pfam:PF04110;Ontology_term=GO:0000045,GO:0005737 LTnewLM_19 Pfam protein_match 675617 675922 . + . Parent=LTnewLM_190022400.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like LTnewLM_19 Pfam protein_match 675698 675922 . + . Parent=LTnewLM_190022400.1:pep;Name=PF04110;signature_desc=Ubiquitin-like autophagy protein Apg12;Ontology_term=GO:0000045,GO:0005737 ### LTnewLM_19 GenomeTools gene 679038 679110 49.8 + . ID=LTnewLM_190022500 LTnewLM_19 INFERNAL snoRNA 679038 679110 49.8 + . ID=LTnewLM_190022500:snoRNA;Parent=LTnewLM_190022500;gc=0.48;evalue=3.2e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_19 GenomeTools gene 679211 679299 106 + . ID=LTnewLM_190022600 LTnewLM_19 INFERNAL snoRNA 679211 679299 106 + . ID=LTnewLM_190022600:snoRNA;Parent=LTnewLM_190022600;gc=0.58;evalue=3.6e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_19 . pseudogene 679780 682045 . + . ID=LTnewLM_190022700:pseudogene;coverage=0.999;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.1220_0;has_internal_stop=true LTnewLM_19 . pseudogenic_transcript 679780 682045 . + . ID=LTnewLM_190022700.1;Parent=LTnewLM_190022700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_19 . pseudogenic_exon 679780 682045 . + . ID=LTnewLM_190022700.1:pseudogenic_exon:1;Parent=LTnewLM_190022700.1;extra_copy_number=0 ### LTnewLM_19 . polypeptide 679780 682045 . + . ID=LTnewLM_190022700.1:pep;Derives_from=LTnewLM_190022700.1;orthologous_to=LmjF.05.1220_mRNA,LmjF.19.1640_mRNA;ortholog_cluster=OG0000519;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 686927 689534 0.5 + . ID=LTnewLM_190022800 LTnewLM_19 AUGUSTUS mRNA 686927 689534 0.5 + . ID=LTnewLM_190022800.1;Parent=LTnewLM_190022800 LTnewLM_19 AUGUSTUS CDS 686927 687697 0.51 + 0 ID=LTnewLM_190022800.1:CDS:1;Parent=LTnewLM_190022800.1 LTnewLM_19 AUGUSTUS CDS 687744 689534 0.57 + 0 ID=LTnewLM_190022800.1:CDS:2;Parent=LTnewLM_190022800.1 ### LTnewLM_19 . polypeptide 686927 689534 . + . ID=LTnewLM_190022800.1:pep;Derives_from=LTnewLM_190022800.1;orthologous_to=LTnewLM_020013200.1,LTnewLM_220023000.1,LmjF.05.1225_mRNA;ortholog_cluster=OG0000142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 690553 692851 0.58 + . ID=LTnewLM_190022900 LTnewLM_19 AUGUSTUS mRNA 690553 692851 0.58 + . ID=LTnewLM_190022900.1;Parent=LTnewLM_190022900 LTnewLM_19 AUGUSTUS CDS 690553 691098 0.83 + 0 ID=LTnewLM_190022900.1:CDS:1;Parent=LTnewLM_190022900.1 LTnewLM_19 AUGUSTUS CDS 691160 692851 0.69 + 0 ID=LTnewLM_190022900.1:CDS:2;Parent=LTnewLM_190022900.1 ### LTnewLM_19 . polypeptide 690553 692851 . + . ID=LTnewLM_190022900.1:pep;Derives_from=LTnewLM_190022900.1;orthologous_to=LTnewLM_190023000.1,LTnewLM_220023100.1,LTnewLM_220023200.1,LTnewLM_220023400.1,LTnewLM_220023600.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_19 AUGUSTUS gene 692897 695449 1 + . ID=LTnewLM_190023000 LTnewLM_19 AUGUSTUS mRNA 692897 695449 1 + . ID=LTnewLM_190023000.1;Parent=LTnewLM_190023000 LTnewLM_19 AUGUSTUS CDS 692897 695449 1 + 0 ID=LTnewLM_190023000.1:CDS:1;Parent=LTnewLM_190023000.1 ### LTnewLM_19 . polypeptide 692897 695449 . + . ID=LTnewLM_190023000.1:pep;Derives_from=LTnewLM_190023000.1;orthologous_to=LTnewLM_190022900.1,LTnewLM_220023100.1,LTnewLM_220023200.1,LTnewLM_220023400.1,LTnewLM_220023600.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 1 676 0.52 + . ID=LTnewLM_020005000;fiveEndPartial=true;Start_range=.,. LTnewLM_2 AUGUSTUS mRNA 1 676 0.52 + . ID=LTnewLM_020005000.1;Parent=LTnewLM_020005000 LTnewLM_2 AUGUSTUS CDS 453 676 0.52 + 2 ID=LTnewLM_020005000.1:CDS:1;Parent=LTnewLM_020005000.1 ### LTnewLM_2 . contig 1 357661 . + . Name=LTnewLM_CTG000019 LTnewLM_2 . polypeptide 453 676 . + . ID=LTnewLM_020005000.1:pep;Derives_from=LTnewLM_020005000.1;orthologous_to=LTnewLM_360005000.1;ortholog_cluster=OG0001849;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 6195 8639 1 - . ID=LTnewLM_020005100 LTnewLM_2 AUGUSTUS mRNA 6195 8639 1 - . ID=LTnewLM_020005100.1;Parent=LTnewLM_020005100 LTnewLM_2 AUGUSTUS CDS 6195 8639 1 - 0 ID=LTnewLM_020005100.1:CDS:1;Parent=LTnewLM_020005100.1 ### LTnewLM_2 . polypeptide 6195 8639 . - . ID=LTnewLM_020005100.1:pep;Derives_from=LTnewLM_020005100.1;orthologous_to=LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 10478 10780 1 - . ID=LTnewLM_020005200 LTnewLM_2 AUGUSTUS mRNA 10478 10780 1 - . ID=LTnewLM_020005200.1;Parent=LTnewLM_020005200 LTnewLM_2 AUGUSTUS CDS 10478 10780 1 - 0 ID=LTnewLM_020005200.1:CDS:1;Parent=LTnewLM_020005200.1 ### LTnewLM_2 . polypeptide 10478 10780 . - . ID=LTnewLM_020005200.1:pep;Derives_from=LTnewLM_020005200.1;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_2 Pfam protein_match 10514 10699 . - . Parent=LTnewLM_020005200.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_2 Pfam protein_match 10517 10684 . - . Parent=LTnewLM_020005200.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_2 AUGUSTUS gene 11607 12578 0.49 - . ID=LTnewLM_020005300 LTnewLM_2 AUGUSTUS mRNA 11607 12578 0.49 - . ID=LTnewLM_020005300.1;Parent=LTnewLM_020005300 LTnewLM_2 AUGUSTUS CDS 11607 11673 0.58 - 1 ID=LTnewLM_020005300.1:CDS:1;Parent=LTnewLM_020005300.1 LTnewLM_2 AUGUSTUS CDS 11746 12578 0.67 - 0 ID=LTnewLM_020005300.1:CDS:2;Parent=LTnewLM_020005300.1 ### LTnewLM_2 . polypeptide 11607 12578 . - . ID=LTnewLM_020005300.1:pep;Derives_from=LTnewLM_020005300.1;orthologous_to=LmjF.02.0030_mRNA,LmjF.25.2440_mRNA;ortholog_cluster=OG0000374;product=term%3DpfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294 LTnewLM_2 Pfam protein_match 11748 12503 . - . Parent=LTnewLM_020005300.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_2 AUGUSTUS gene 13415 15274 1 - . ID=LTnewLM_020005400 LTnewLM_2 AUGUSTUS mRNA 13415 15274 1 - . ID=LTnewLM_020005400.1;Parent=LTnewLM_020005400 LTnewLM_2 AUGUSTUS CDS 13415 15274 1 - 0 ID=LTnewLM_020005400.1:CDS:1;Parent=LTnewLM_020005400.1 ### LTnewLM_2 . polypeptide 13415 15274 . - . ID=LTnewLM_020005400.1:pep;Derives_from=LTnewLM_020005400.1;orthologous_to=LTnewLM_250031200.1,LmjF.02.0040_mRNA,LmjF.25.2430_mRNA;ortholog_cluster=OG0000143;product=term%3DCreatinase/Prolidase N-terminal domain/Metallopeptidase family M24/C-terminal region of peptidase_M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01321|Pfam:PF16189|Pfam:PF00557|Pfam:PF16188;Ontology_term=GO:0016787 LTnewLM_2 Pfam protein_match 13475 13666 . - . Parent=LTnewLM_020005400.1:pep;Name=PF16188;signature_desc=C-terminal region of peptidase_M24 LTnewLM_2 Pfam protein_match 13709 14347 . - . Parent=LTnewLM_020005400.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 LTnewLM_2 Pfam protein_match 14360 14836 . - . Parent=LTnewLM_020005400.1:pep;Name=PF16189;signature_desc=Creatinase/Prolidase N-terminal domain LTnewLM_2 Pfam protein_match 14855 15241 . - . Parent=LTnewLM_020005400.1:pep;Name=PF01321;signature_desc=Creatinase/Prolidase N-terminal domain;Ontology_term=GO:0016787 ### LTnewLM_2 AUGUSTUS gene 20514 21170 1 - . ID=LTnewLM_020005500 LTnewLM_2 AUGUSTUS mRNA 20514 21170 1 - . ID=LTnewLM_020005500.1;Parent=LTnewLM_020005500 LTnewLM_2 AUGUSTUS CDS 20514 21170 1 - 0 ID=LTnewLM_020005500.1:CDS:1;Parent=LTnewLM_020005500.1 ### LTnewLM_2 . polypeptide 20514 21170 . - . ID=LTnewLM_020005500.1:pep;Derives_from=LTnewLM_020005500.1;orthologous_to=LmjF.02.0050_mRNA;ortholog_cluster=OG0001850;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_2 Pfam protein_match 20700 20912 . - . Parent=LTnewLM_020005500.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 LTnewLM_2 Pfam protein_match 20943 21155 . - . Parent=LTnewLM_020005500.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_2 AUGUSTUS gene 21875 22453 1 - . ID=LTnewLM_020005600 LTnewLM_2 AUGUSTUS mRNA 21875 22453 1 - . ID=LTnewLM_020005600.1;Parent=LTnewLM_020005600 LTnewLM_2 AUGUSTUS CDS 21875 22453 1 - 0 ID=LTnewLM_020005600.1:CDS:1;Parent=LTnewLM_020005600.1 ### LTnewLM_2 . polypeptide 21875 22453 . - . ID=LTnewLM_020005600.1:pep;Derives_from=LTnewLM_020005600.1;orthologous_to=LmjF.02.0060_mRNA;ortholog_cluster=OG0001851;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 23069 24262 1 - . ID=LTnewLM_020005700 LTnewLM_2 AUGUSTUS mRNA 23069 24262 1 - . ID=LTnewLM_020005700.1;Parent=LTnewLM_020005700 LTnewLM_2 AUGUSTUS CDS 23069 24262 1 - 0 ID=LTnewLM_020005700.1:CDS:1;Parent=LTnewLM_020005700.1 ### LTnewLM_2 . polypeptide 23069 24262 . - . ID=LTnewLM_020005700.1:pep;Derives_from=LTnewLM_020005700.1;orthologous_to=LmjF.02.0070_mRNA;ortholog_cluster=OG0001852;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 Liftoff gene 26507 29803 . - . ID=LTnewLM_020005800;coverage=0.993;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.02.0080_0 LTnewLM_2 Liftoff mRNA 26507 29803 . - . ID=LTnewLM_020005800.1;Parent=LTnewLM_020005800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_2 Liftoff CDS 26507 29803 . - 0 ID=LTnewLM_020005800.1:CDS:1;Parent=LTnewLM_020005800.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 26507 29803 . - . ID=LTnewLM_020005800.1:pep;Derives_from=LTnewLM_020005800.1;orthologous_to=LmjF.02.0080_mRNA;ortholog_cluster=OG0001853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 31201 32145 1 - . ID=LTnewLM_020005900 LTnewLM_2 AUGUSTUS mRNA 31201 32145 1 - . ID=LTnewLM_020005900.1;Parent=LTnewLM_020005900 LTnewLM_2 AUGUSTUS CDS 31201 32145 1 - 0 ID=LTnewLM_020005900.1:CDS:1;Parent=LTnewLM_020005900.1 ### LTnewLM_2 . polypeptide 31201 32145 . - . ID=LTnewLM_020005900.1:pep;Derives_from=LTnewLM_020005900.1;orthologous_to=LmjF.02.0085_mRNA;ortholog_cluster=OG0001854;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 33188 34252 1 - . ID=LTnewLM_020006000 LTnewLM_2 AUGUSTUS mRNA 33188 34252 1 - . ID=LTnewLM_020006000.1;Parent=LTnewLM_020006000 LTnewLM_2 AUGUSTUS CDS 33188 34252 1 - 0 ID=LTnewLM_020006000.1:CDS:1;Parent=LTnewLM_020006000.1 ### LTnewLM_2 . polypeptide 33188 34252 . - . ID=LTnewLM_020006000.1:pep;Derives_from=LTnewLM_020006000.1;orthologous_to=LmjF.02.0090_mRNA;ortholog_cluster=OG0001855;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 35630 38553 0.97 - . ID=LTnewLM_020006100 LTnewLM_2 AUGUSTUS mRNA 35630 38553 0.97 - . ID=LTnewLM_020006100.1;Parent=LTnewLM_020006100 LTnewLM_2 AUGUSTUS CDS 35630 38080 0.97 - 0 ID=LTnewLM_020006100.1:CDS:1;Parent=LTnewLM_020006100.1 LTnewLM_2 AUGUSTUS CDS 38530 38553 0.98 - 0 ID=LTnewLM_020006100.1:CDS:2;Parent=LTnewLM_020006100.1 ### LTnewLM_2 . polypeptide 35630 38553 . - . ID=LTnewLM_020006100.1:pep;Derives_from=LTnewLM_020006100.1;orthologous_to=LTnewLM_360013300.1,LmjF.36.0730_mRNA,LmjF.36.0740_mRNA;ortholog_cluster=OG0000144;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 40562 44062 1 - . ID=LTnewLM_020006200 LTnewLM_2 AUGUSTUS mRNA 40562 44062 1 - . ID=LTnewLM_020006200.1;Parent=LTnewLM_020006200 LTnewLM_2 AUGUSTUS CDS 40562 44062 1 - 0 ID=LTnewLM_020006200.1:CDS:1;Parent=LTnewLM_020006200.1 ### LTnewLM_2 . polypeptide 40562 44062 . - . ID=LTnewLM_020006200.1:pep;Derives_from=LTnewLM_020006200.1;orthologous_to=LmjF.02.0110_mRNA;ortholog_cluster=OG0001856;product=term%3DExportin 1-like protein/Exportin-T%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08389|Pfam:PF19282 LTnewLM_2 Pfam protein_match 42167 42868 . - . Parent=LTnewLM_020006200.1:pep;Name=PF19282;signature_desc=Exportin-T LTnewLM_2 Pfam protein_match 43262 43738 . - . Parent=LTnewLM_020006200.1:pep;Name=PF08389;signature_desc=Exportin 1-like protein ### LTnewLM_2 AUGUSTUS gene 45847 60549 1 - . ID=LTnewLM_020006300 LTnewLM_2 AUGUSTUS mRNA 45847 60549 1 - . ID=LTnewLM_020006300.1;Parent=LTnewLM_020006300 LTnewLM_2 AUGUSTUS CDS 45847 60549 1 - 0 ID=LTnewLM_020006300.1:CDS:1;Parent=LTnewLM_020006300.1 ### LTnewLM_2 . polypeptide 45847 60549 . - . ID=LTnewLM_020006300.1:pep;Derives_from=LTnewLM_020006300.1;orthologous_to=LmjF.02.0120_mRNA;ortholog_cluster=OG0001857;product=term%3DPhosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00454;Ontology_term=GO:0016773 LTnewLM_2 Pfam protein_match 46117 46860 . - . Parent=LTnewLM_020006300.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_2 AUGUSTUS gene 62149 62868 1 - . ID=LTnewLM_020006400 LTnewLM_2 AUGUSTUS mRNA 62149 62868 1 - . ID=LTnewLM_020006400.1;Parent=LTnewLM_020006400 LTnewLM_2 AUGUSTUS CDS 62149 62868 1 - 0 ID=LTnewLM_020006400.1:CDS:1;Parent=LTnewLM_020006400.1 ### LTnewLM_2 . polypeptide 62149 62868 . - . ID=LTnewLM_020006400.1:pep;Derives_from=LTnewLM_020006400.1;orthologous_to=LmjF.02.0130_mRNA;ortholog_cluster=OG0001858;product=term%3DPre-mRNA-splicing factor SF3a complex subunit 2 (Prp11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16835 LTnewLM_2 Pfam protein_match 62179 62496 . - . Parent=LTnewLM_020006400.1:pep;Name=PF16835;signature_desc=Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) ### LTnewLM_2 AUGUSTUS gene 63824 66511 1 - . ID=LTnewLM_020006500 LTnewLM_2 AUGUSTUS mRNA 63824 66511 1 - . ID=LTnewLM_020006500.1;Parent=LTnewLM_020006500 LTnewLM_2 AUGUSTUS CDS 63824 66511 1 - 0 ID=LTnewLM_020006500.1:CDS:1;Parent=LTnewLM_020006500.1 ### LTnewLM_2 . polypeptide 63824 66511 . - . ID=LTnewLM_020006500.1:pep;Derives_from=LTnewLM_020006500.1;orthologous_to=LmjF.02.0140_mRNA;ortholog_cluster=OG0001859;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920 LTnewLM_2 Pfam protein_match 63848 64003 . - . Parent=LTnewLM_020006500.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_2 AUGUSTUS gene 67800 73715 1 - . ID=LTnewLM_020006600 LTnewLM_2 AUGUSTUS mRNA 67800 73715 1 - . ID=LTnewLM_020006600.1;Parent=LTnewLM_020006600 LTnewLM_2 AUGUSTUS CDS 67800 73715 1 - 0 ID=LTnewLM_020006600.1:CDS:1;Parent=LTnewLM_020006600.1 ### LTnewLM_2 . polypeptide 67800 73715 . - . ID=LTnewLM_020006600.1:pep;Derives_from=LTnewLM_020006600.1;orthologous_to=LmjF.02.0150_mRNA;ortholog_cluster=OG0001860;product=term%3DVps51/Vps67%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08700 LTnewLM_2 Pfam protein_match 73515 73703 . - . Parent=LTnewLM_020006600.1:pep;Name=PF08700;signature_desc=Vps51/Vps67 ### LTnewLM_2 Liftoff gene 74096 74419 . - . ID=LTnewLM_020006700;coverage=0.993;sequence_ID=0.831;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.02.0155_0 LTnewLM_2 Liftoff mRNA 74096 74419 . - . ID=LTnewLM_020006700.1;Parent=LTnewLM_020006700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_2 Liftoff CDS 74096 74419 . - 0 ID=LTnewLM_020006700.1:CDS:1;Parent=LTnewLM_020006700.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 74096 74419 . - . ID=LTnewLM_020006700.1:pep;Derives_from=LTnewLM_020006700.1;orthologous_to=LmjF.02.0155_mRNA;ortholog_cluster=OG0001861;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 80828 83281 1 - . ID=LTnewLM_020006800 LTnewLM_2 AUGUSTUS mRNA 80828 83281 1 - . ID=LTnewLM_020006800.1;Parent=LTnewLM_020006800 LTnewLM_2 AUGUSTUS CDS 80828 83281 1 - 0 ID=LTnewLM_020006800.1:CDS:1;Parent=LTnewLM_020006800.1 ### LTnewLM_2 . polypeptide 80828 83281 . - . ID=LTnewLM_020006800.1:pep;Derives_from=LTnewLM_020006800.1;orthologous_to=LTnewLM_020006900.1,LTnewLM_020007000.1,LTnewLM_020007400.1,LmjF.02.0160_mRNA,LmjF.02.0170_mRNA,LmjF.02.0210_mRNA;ortholog_cluster=OG0000039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 87621 90044 1 - . ID=LTnewLM_020006900 LTnewLM_2 AUGUSTUS mRNA 87621 90044 1 - . ID=LTnewLM_020006900.1;Parent=LTnewLM_020006900 LTnewLM_2 AUGUSTUS CDS 87621 90044 1 - 0 ID=LTnewLM_020006900.1:CDS:1;Parent=LTnewLM_020006900.1 ### LTnewLM_2 . polypeptide 87621 90044 . - . ID=LTnewLM_020006900.1:pep;Derives_from=LTnewLM_020006900.1;orthologous_to=LTnewLM_020006800.1,LTnewLM_020007000.1,LTnewLM_020007400.1,LmjF.02.0160_mRNA,LmjF.02.0170_mRNA,LmjF.02.0210_mRNA;ortholog_cluster=OG0000039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 . pseudogene 91976 94035 2.58e+03 - . ID=LTnewLM_020007000:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.02.0160:mRNA 148 813;original_prot_length=818 LTnewLM_2 . pseudogenic_transcript 91976 94035 . - . ID=LTnewLM_020007000.1;Parent=LTnewLM_020007000:pseudogene LTnewLM_2 . pseudogenic_exon 91976 92962 . - . ID=LTnewLM_020007000.1:pseudogenic_exon:1;Parent=LTnewLM_020007000.1 LTnewLM_2 . pseudogenic_exon 92965 94035 . - . ID=LTnewLM_020007000.1:pseudogenic_exon:2;Parent=LTnewLM_020007000.1 ### LTnewLM_2 . polypeptide 91976 94035 . - . ID=LTnewLM_020007000.1:pep;Derives_from=LTnewLM_020007000.1;orthologous_to=LTnewLM_020006800.1,LTnewLM_020006900.1,LTnewLM_020007400.1,LmjF.02.0160_mRNA,LmjF.02.0170_mRNA,LmjF.02.0210_mRNA;ortholog_cluster=OG0000039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 95014 95310 0.69 - . ID=LTnewLM_020007100 LTnewLM_2 AUGUSTUS mRNA 95014 95310 0.69 - . ID=LTnewLM_020007100.1;Parent=LTnewLM_020007100 LTnewLM_2 AUGUSTUS CDS 95014 95310 0.69 - 0 ID=LTnewLM_020007100.1:CDS:1;Parent=LTnewLM_020007100.1 ### LTnewLM_2 . polypeptide 95014 95310 . - . ID=LTnewLM_020007100.1:pep;Derives_from=LTnewLM_020007100.1;product=term%3Dhypothetical protein ### LTnewLM_2 AUGUSTUS gene 98012 98248 1 - . ID=LTnewLM_020007200 LTnewLM_2 AUGUSTUS mRNA 98012 98248 1 - . ID=LTnewLM_020007200.1;Parent=LTnewLM_020007200 LTnewLM_2 AUGUSTUS CDS 98012 98248 1 - 0 ID=LTnewLM_020007200.1:CDS:1;Parent=LTnewLM_020007200.1 ### LTnewLM_2 . polypeptide 98012 98248 . - . ID=LTnewLM_020007200.1:pep;Derives_from=LTnewLM_020007200.1;product=term%3Dhypothetical protein ### LTnewLM_2 AUGUSTUS gene 100813 103350 1 - . ID=LTnewLM_020007300 LTnewLM_2 AUGUSTUS mRNA 100813 103350 1 - . ID=LTnewLM_020007300.1;Parent=LTnewLM_020007300 LTnewLM_2 AUGUSTUS CDS 100813 103350 1 - 0 ID=LTnewLM_020007300.1:CDS:1;Parent=LTnewLM_020007300.1 ### LTnewLM_2 . polypeptide 100813 103350 . - . ID=LTnewLM_020007300.1:pep;Derives_from=LTnewLM_020007300.1;orthologous_to=LmjF.02.0200_mRNA;ortholog_cluster=OG0001862;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 105302 107893 1 - . ID=LTnewLM_020007400 LTnewLM_2 AUGUSTUS mRNA 105302 107893 1 - . ID=LTnewLM_020007400.1;Parent=LTnewLM_020007400 LTnewLM_2 AUGUSTUS CDS 105302 107893 1 - 0 ID=LTnewLM_020007400.1:CDS:1;Parent=LTnewLM_020007400.1 ### LTnewLM_2 . polypeptide 105302 107893 . - . ID=LTnewLM_020007400.1:pep;Derives_from=LTnewLM_020007400.1;orthologous_to=LTnewLM_020006800.1,LTnewLM_020006900.1,LTnewLM_020007000.1,LmjF.02.0160_mRNA,LmjF.02.0170_mRNA,LmjF.02.0210_mRNA;ortholog_cluster=OG0000039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 . polypeptide 111227 113727 . - . ID=LTnewLM_020007500.1:pep;Derives_from=LTnewLM_020007500.1;orthologous_to=LmjF.02.0180_mRNA,LmjF.02.0220_mRNA;ortholog_cluster=OG0000520;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 . pseudogene 111227 113828 . - . ID=LTnewLM_020007500:pseudogene;coverage=0.998;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0180_0;has_internal_stop=true LTnewLM_2 . pseudogenic_transcript 111227 113828 . - . ID=LTnewLM_020007500.1;Parent=LTnewLM_020007500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_2 . pseudogenic_exon 111227 113727 . - . ID=LTnewLM_020007500.1:pseudogenic_exon:1;Parent=LTnewLM_020007500.1;extra_copy_number=0 ### LTnewLM_2 AUGUSTUS gene 115033 117990 1 - . ID=LTnewLM_020007600 LTnewLM_2 AUGUSTUS mRNA 115033 117990 1 - . ID=LTnewLM_020007600.1;Parent=LTnewLM_020007600 LTnewLM_2 AUGUSTUS CDS 115033 117990 1 - 0 ID=LTnewLM_020007600.1:CDS:1;Parent=LTnewLM_020007600.1 ### LTnewLM_2 . polypeptide 115033 117990 . - . ID=LTnewLM_020007600.1:pep;Derives_from=LTnewLM_020007600.1;orthologous_to=LmjF.02.0190_mRNA,LmjF.02.0230_mRNA;ortholog_cluster=OG0000375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 120133 123162 1 - . ID=LTnewLM_020007700 LTnewLM_2 AUGUSTUS mRNA 120133 123162 1 - . ID=LTnewLM_020007700.1;Parent=LTnewLM_020007700 LTnewLM_2 AUGUSTUS CDS 120133 123162 1 - 0 ID=LTnewLM_020007700.1:CDS:1;Parent=LTnewLM_020007700.1 ### LTnewLM_2 . polypeptide 120133 123162 . - . ID=LTnewLM_020007700.1:pep;Derives_from=LTnewLM_020007700.1;orthologous_to=LmjF.02.0240_mRNA;ortholog_cluster=OG0001863;product=term%3DGlycosyltransferase (GlcNAc)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11397 LTnewLM_2 Pfam protein_match 120184 121344 . - . Parent=LTnewLM_020007700.1:pep;Name=PF11397;signature_desc=Glycosyltransferase (GlcNAc) ### LTnewLM_2 AUGUSTUS gene 124453 127893 1 - . ID=LTnewLM_020007800 LTnewLM_2 AUGUSTUS mRNA 124453 127893 1 - . ID=LTnewLM_020007800.1;Parent=LTnewLM_020007800 LTnewLM_2 AUGUSTUS CDS 124453 127893 1 - 0 ID=LTnewLM_020007800.1:CDS:1;Parent=LTnewLM_020007800.1 ### LTnewLM_2 . polypeptide 124453 127893 . - . ID=LTnewLM_020007800.1:pep;Derives_from=LTnewLM_020007800.1;orthologous_to=LmjF.02.0250_mRNA;ortholog_cluster=OG0001864;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 129401 130225 1 - . ID=LTnewLM_020007900 LTnewLM_2 AUGUSTUS mRNA 129401 130225 1 - . ID=LTnewLM_020007900.1;Parent=LTnewLM_020007900 LTnewLM_2 AUGUSTUS CDS 129401 130225 1 - 0 ID=LTnewLM_020007900.1:CDS:1;Parent=LTnewLM_020007900.1 ### LTnewLM_2 . polypeptide 129401 130225 . - . ID=LTnewLM_020007900.1:pep;Derives_from=LTnewLM_020007900.1;orthologous_to=LmjF.02.0260_mRNA;ortholog_cluster=OG0001865;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_2 Pfam protein_match 129671 130150 . - . Parent=LTnewLM_020007900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_2 Pfam protein_match 129677 130168 . - . Parent=LTnewLM_020007900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_2 Pfam protein_match 129758 130150 . - . Parent=LTnewLM_020007900.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_2 Pfam protein_match 129806 130150 . - . Parent=LTnewLM_020007900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_2 AUGUSTUS gene 131703 132197 1 - . ID=LTnewLM_020008000 LTnewLM_2 AUGUSTUS mRNA 131703 132197 1 - . ID=LTnewLM_020008000.1;Parent=LTnewLM_020008000 LTnewLM_2 AUGUSTUS CDS 131703 132197 1 - 0 ID=LTnewLM_020008000.1:CDS:1;Parent=LTnewLM_020008000.1 ### LTnewLM_2 . polypeptide 131703 132197 . - . ID=LTnewLM_020008000.1:pep;Derives_from=LTnewLM_020008000.1;orthologous_to=LmjF.02.0270_mRNA;ortholog_cluster=OG0001866;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 133977 134486 1 - . ID=LTnewLM_020008100 LTnewLM_2 AUGUSTUS mRNA 133977 134486 1 - . ID=LTnewLM_020008100.1;Parent=LTnewLM_020008100 LTnewLM_2 AUGUSTUS CDS 133977 134486 1 - 0 ID=LTnewLM_020008100.1:CDS:1;Parent=LTnewLM_020008100.1 ### LTnewLM_2 . polypeptide 133977 134486 . - . ID=LTnewLM_020008100.1:pep;Derives_from=LTnewLM_020008100.1;orthologous_to=LmjF.02.0280_mRNA;ortholog_cluster=OG0001867;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 135371 136963 1 - . ID=LTnewLM_020008200 LTnewLM_2 AUGUSTUS mRNA 135371 136963 1 - . ID=LTnewLM_020008200.1;Parent=LTnewLM_020008200 LTnewLM_2 AUGUSTUS CDS 135371 136963 1 - 0 ID=LTnewLM_020008200.1:CDS:1;Parent=LTnewLM_020008200.1 ### LTnewLM_2 . polypeptide 135371 136963 . - . ID=LTnewLM_020008200.1:pep;Derives_from=LTnewLM_020008200.1;orthologous_to=LmjF.02.0290_mRNA;ortholog_cluster=OG0001868;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_2 Pfam protein_match 135599 136513 . - . Parent=LTnewLM_020008200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_2 Pfam protein_match 135614 136513 . - . Parent=LTnewLM_020008200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_2 Pfam protein_match 135773 136069 . - . Parent=LTnewLM_020008200.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_2 AUGUSTUS gene 141392 149389 1 - . ID=LTnewLM_020008300 LTnewLM_2 AUGUSTUS mRNA 141392 149389 1 - . ID=LTnewLM_020008300.1;Parent=LTnewLM_020008300 LTnewLM_2 AUGUSTUS CDS 141392 149389 1 - 0 ID=LTnewLM_020008300.1:CDS:1;Parent=LTnewLM_020008300.1 ### LTnewLM_2 . polypeptide 141392 149389 . - . ID=LTnewLM_020008300.1:pep;Derives_from=LTnewLM_020008300.1;orthologous_to=LmjF.02.0300_mRNA;ortholog_cluster=OG0001869;product=term%3DABC-2 family transporter protein/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_2 Pfam protein_match 142043 142471 . - . Parent=LTnewLM_020008300.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_2 Pfam protein_match 142922 144058 . - . Parent=LTnewLM_020008300.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_2 Pfam protein_match 145295 145714 . - . Parent=LTnewLM_020008300.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_2 Pfam protein_match 146156 147250 . - . Parent=LTnewLM_020008300.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_2 AUGUSTUS gene 153590 155662 1 - . ID=LTnewLM_020008400 LTnewLM_2 AUGUSTUS mRNA 153590 155662 1 - . ID=LTnewLM_020008400.1;Parent=LTnewLM_020008400 LTnewLM_2 AUGUSTUS CDS 153590 155662 1 - 0 ID=LTnewLM_020008400.1:CDS:1;Parent=LTnewLM_020008400.1 ### LTnewLM_2 . polypeptide 153590 155662 . - . ID=LTnewLM_020008400.1:pep;Derives_from=LTnewLM_020008400.1;orthologous_to=LmjF.02.0310_mRNA;ortholog_cluster=OG0001870;product=term%3DSoluble NSF attachment protein%2C SNAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14938 LTnewLM_2 Pfam protein_match 154445 154894 . - . Parent=LTnewLM_020008400.1:pep;Name=PF14938;signature_desc=Soluble NSF attachment protein%2C SNAP ### LTnewLM_2 Liftoff gene 156814 157842 . - . ID=LTnewLM_020008500;coverage=1.0;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0320_0 LTnewLM_2 Liftoff mRNA 156814 157842 . - . ID=LTnewLM_020008500.1;Parent=LTnewLM_020008500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_2 Liftoff CDS 156814 157842 . - 0 ID=LTnewLM_020008500.1:CDS:1;Parent=LTnewLM_020008500.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 156814 157842 . - . ID=LTnewLM_020008500.1:pep;Derives_from=LTnewLM_020008500.1;orthologous_to=LmjF.02.0320_mRNA;ortholog_cluster=OG0001871;product=term%3D3' exoribonuclease family%2C domain 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01138 LTnewLM_2 Pfam protein_match 157333 157719 . - . Parent=LTnewLM_020008500.1:pep;Name=PF01138;signature_desc=3' exoribonuclease family%2C domain 1 ### LTnewLM_2 . pseudogene 158458 163182 . - . ID=LTnewLM_020008600:pseudogene;coverage=0.980;sequence_ID=0.909;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0330_0;has_internal_stop=true LTnewLM_2 . pseudogenic_transcript 158458 163182 . - . ID=LTnewLM_020008600.1;Parent=LTnewLM_020008600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_2 . pseudogenic_exon 158458 163182 . - . ID=LTnewLM_020008600.1:pseudogenic_exon:1;Parent=LTnewLM_020008600.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 158458 163182 . - . ID=LTnewLM_020008600.1:pep;Derives_from=LTnewLM_020008600.1;orthologous_to=LmjF.02.0330_mRNA;ortholog_cluster=OG0007493;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 164173 167091 1 - . ID=LTnewLM_020008700 LTnewLM_2 AUGUSTUS mRNA 164173 167091 1 - . ID=LTnewLM_020008700.1;Parent=LTnewLM_020008700 LTnewLM_2 AUGUSTUS CDS 164173 167091 1 - 0 ID=LTnewLM_020008700.1:CDS:1;Parent=LTnewLM_020008700.1 ### LTnewLM_2 . polypeptide 164173 167091 . - . ID=LTnewLM_020008700.1:pep;Derives_from=LTnewLM_020008700.1;orthologous_to=LmjF.02.0340_mRNA;ortholog_cluster=OG0001872;product=term%3DUAA transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08449;Ontology_term=GO:0055085 LTnewLM_2 Pfam protein_match 164206 164430 . - . Parent=LTnewLM_020008700.1:pep;Name=PF08449;signature_desc=UAA transporter family;Ontology_term=GO:0055085 ### LTnewLM_2 AUGUSTUS gene 168253 171432 1 - . ID=LTnewLM_020008800 LTnewLM_2 AUGUSTUS mRNA 168253 171432 1 - . ID=LTnewLM_020008800.1;Parent=LTnewLM_020008800 LTnewLM_2 AUGUSTUS CDS 168253 171432 1 - 0 ID=LTnewLM_020008800.1:CDS:1;Parent=LTnewLM_020008800.1 ### LTnewLM_2 . polypeptide 168253 171432 . - . ID=LTnewLM_020008800.1:pep;Derives_from=LTnewLM_020008800.1;orthologous_to=LmjF.02.0350_mRNA;ortholog_cluster=OG0001873;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 173172 174317 1 - . ID=LTnewLM_020008900 LTnewLM_2 AUGUSTUS mRNA 173172 174317 1 - . ID=LTnewLM_020008900.1;Parent=LTnewLM_020008900 LTnewLM_2 AUGUSTUS CDS 173172 174317 1 - 0 ID=LTnewLM_020008900.1:CDS:1;Parent=LTnewLM_020008900.1 ### LTnewLM_2 . polypeptide 173172 174317 . - . ID=LTnewLM_020008900.1:pep;Derives_from=LTnewLM_020008900.1;orthologous_to=LmjF.02.0360_mRNA;ortholog_cluster=OG0001874;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_2 Pfam protein_match 173238 174113 . - . Parent=LTnewLM_020008900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_2 Pfam protein_match 173496 174110 . - . Parent=LTnewLM_020008900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_2 AUGUSTUS gene 175920 177509 1 - . ID=LTnewLM_020009000 LTnewLM_2 AUGUSTUS mRNA 175920 177509 1 - . ID=LTnewLM_020009000.1;Parent=LTnewLM_020009000 LTnewLM_2 AUGUSTUS CDS 175920 177509 1 - 0 ID=LTnewLM_020009000.1:CDS:1;Parent=LTnewLM_020009000.1 ### LTnewLM_2 . polypeptide 175920 177509 . - . ID=LTnewLM_020009000.1:pep;Derives_from=LTnewLM_020009000.1;orthologous_to=LmjF.02.0370_mRNA;ortholog_cluster=OG0001875;product=term%3D26S proteasome regulatory subunit RPN6 N-terminal domain/PCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18055|Pfam:PF01399;Ontology_term=GO:0005515 LTnewLM_2 Pfam protein_match 176295 176636 . - . Parent=LTnewLM_020009000.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 LTnewLM_2 Pfam protein_match 177111 177440 . - . Parent=LTnewLM_020009000.1:pep;Name=PF18055;signature_desc=26S proteasome regulatory subunit RPN6 N-terminal domain ### LTnewLM_2 AUGUSTUS gene 178579 179952 1 - . ID=LTnewLM_020009100 LTnewLM_2 AUGUSTUS mRNA 178579 179952 1 - . ID=LTnewLM_020009100.1;Parent=LTnewLM_020009100 LTnewLM_2 AUGUSTUS CDS 178579 179952 1 - 0 ID=LTnewLM_020009100.1:CDS:1;Parent=LTnewLM_020009100.1 ### LTnewLM_2 . polypeptide 178579 179952 . - . ID=LTnewLM_020009100.1:pep;Derives_from=LTnewLM_020009100.1;orthologous_to=LmjF.02.0380_mRNA;ortholog_cluster=OG0001876;product=term%3DFtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_2 Pfam protein_match 179203 179892 . - . Parent=LTnewLM_020009100.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_2 AUGUSTUS gene 181266 181937 1 - . ID=LTnewLM_020009200 LTnewLM_2 AUGUSTUS mRNA 181266 181937 1 - . ID=LTnewLM_020009200.1;Parent=LTnewLM_020009200 LTnewLM_2 AUGUSTUS CDS 181266 181937 1 - 0 ID=LTnewLM_020009200.1:CDS:1;Parent=LTnewLM_020009200.1 ### LTnewLM_2 . polypeptide 181266 181937 . - . ID=LTnewLM_020009200.1:pep;Derives_from=LTnewLM_020009200.1;orthologous_to=LmjF.02.0390_mRNA;ortholog_cluster=OG0001877;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_2 Pfam protein_match 181296 181640 . - . Parent=LTnewLM_020009200.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_2 Liftoff gene 182300 182452 . - . ID=LTnewLM_020009300;coverage=0.910;sequence_ID=0.839;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.02.0400_0 LTnewLM_2 Liftoff mRNA 182300 182452 . - . ID=LTnewLM_020009300.1;Parent=LTnewLM_020009300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_2 Liftoff CDS 182300 182452 . - 0 ID=LTnewLM_020009300.1:CDS:1;Parent=LTnewLM_020009300.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 182300 182452 . - . ID=LTnewLM_020009300.1:pep;Derives_from=LTnewLM_020009300.1;orthologous_to=LmjF.02.0400_mRNA;ortholog_cluster=OG0001878;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 183160 186240 1 - . ID=LTnewLM_020009400 LTnewLM_2 AUGUSTUS mRNA 183160 186240 1 - . ID=LTnewLM_020009400.1;Parent=LTnewLM_020009400 LTnewLM_2 AUGUSTUS CDS 183160 186240 1 - 0 ID=LTnewLM_020009400.1:CDS:1;Parent=LTnewLM_020009400.1 ### LTnewLM_2 . polypeptide 183160 186240 . - . ID=LTnewLM_020009400.1:pep;Derives_from=LTnewLM_020009400.1;orthologous_to=LmjF.02.0410_mRNA;ortholog_cluster=OG0001879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 188928 191987 1 - . ID=LTnewLM_020009500 LTnewLM_2 AUGUSTUS mRNA 188928 191987 1 - . ID=LTnewLM_020009500.1;Parent=LTnewLM_020009500 LTnewLM_2 AUGUSTUS CDS 188928 191987 1 - 0 ID=LTnewLM_020009500.1:CDS:1;Parent=LTnewLM_020009500.1 ### LTnewLM_2 . polypeptide 188928 191987 . - . ID=LTnewLM_020009500.1:pep;Derives_from=LTnewLM_020009500.1;orthologous_to=LmjF.02.0420_mRNA;ortholog_cluster=OG0001880;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 193677 194441 1 - . ID=LTnewLM_020009600 LTnewLM_2 AUGUSTUS mRNA 193677 194441 1 - . ID=LTnewLM_020009600.1;Parent=LTnewLM_020009600 LTnewLM_2 AUGUSTUS CDS 193677 194441 1 - 0 ID=LTnewLM_020009600.1:CDS:1;Parent=LTnewLM_020009600.1 ### LTnewLM_2 . polypeptide 193677 194441 . - . ID=LTnewLM_020009600.1:pep;Derives_from=LTnewLM_020009600.1;product=term%3Dhypothetical protein ### LTnewLM_2 AUGUSTUS gene 195855 196967 1 - . ID=LTnewLM_020009700 LTnewLM_2 AUGUSTUS mRNA 195855 196967 1 - . ID=LTnewLM_020009700.1;Parent=LTnewLM_020009700 LTnewLM_2 AUGUSTUS CDS 195855 196967 1 - 0 ID=LTnewLM_020009700.1:CDS:1;Parent=LTnewLM_020009700.1 ### LTnewLM_2 . polypeptide 195855 196967 . - . ID=LTnewLM_020009700.1:pep;Derives_from=LTnewLM_020009700.1;orthologous_to=LmjF.02.0430_mRNA;ortholog_cluster=OG0001881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 . polypeptide 199498 200682 . - . ID=LTnewLM_020009800.1:pep;Derives_from=LTnewLM_020009800.1;orthologous_to=LTnewLM_020009800.2,LTnewLM_270011500.1,LTnewLM_310008700.1,LTnewLM_310008800.1,LmjF.27.0670_mRNA,LmjF.31.0330_mRNA,LmjF.31.0340_mRNA;ortholog_cluster=OG0000025;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_2 Pfam protein_match 199576 200676 . - . Parent=LTnewLM_020009800.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_2 AUGUSTUS gene 199498 200739 1.5 - . ID=LTnewLM_020009800 LTnewLM_2 AUGUSTUS mRNA 199498 200682 0.71 - . ID=LTnewLM_020009800.1;Parent=LTnewLM_020009800 LTnewLM_2 AUGUSTUS CDS 199498 200385 0.97 - 0 ID=LTnewLM_020009800.1:CDS:1;Parent=LTnewLM_020009800.1 LTnewLM_2 AUGUSTUS CDS 200434 200682 0.71 - 0 ID=LTnewLM_020009800.1:CDS:2;Parent=LTnewLM_020009800.1 LTnewLM_2 AUGUSTUS mRNA 199498 200739 0.79 - . ID=LTnewLM_020009800.2;Parent=LTnewLM_020009800 LTnewLM_2 AUGUSTUS CDS 199498 200385 0.91 - 0 ID=LTnewLM_020009800.2:CDS:1;Parent=LTnewLM_020009800.2 LTnewLM_2 AUGUSTUS CDS 200434 200739 0.79 - 0 ID=LTnewLM_020009800.2:CDS:2;Parent=LTnewLM_020009800.2 ### LTnewLM_2 . polypeptide 199498 200739 . - . ID=LTnewLM_020009800.2:pep;Derives_from=LTnewLM_020009800.2;orthologous_to=LTnewLM_020009800.1,LTnewLM_270011500.1,LTnewLM_310008700.1,LTnewLM_310008800.1,LmjF.27.0670_mRNA,LmjF.31.0330_mRNA,LmjF.31.0340_mRNA;ortholog_cluster=OG0000025;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_2 Pfam protein_match 199576 200700 . - . Parent=LTnewLM_020009800.2:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_2 AUGUSTUS gene 200794 201270 1 - . ID=LTnewLM_020009900 LTnewLM_2 AUGUSTUS mRNA 200794 201270 1 - . ID=LTnewLM_020009900.1;Parent=LTnewLM_020009900 LTnewLM_2 AUGUSTUS CDS 200794 201270 1 - 0 ID=LTnewLM_020009900.1:CDS:1;Parent=LTnewLM_020009900.1 ### LTnewLM_2 . polypeptide 200794 201270 . - . ID=LTnewLM_020009900.1:pep;Derives_from=LTnewLM_020009900.1;product=term%3Dhypothetical protein ### LTnewLM_2 AUGUSTUS gene 203570 204403 1 - . ID=LTnewLM_020010000 LTnewLM_2 AUGUSTUS mRNA 203570 204403 1 - . ID=LTnewLM_020010000.1;Parent=LTnewLM_020010000 LTnewLM_2 AUGUSTUS CDS 203570 204403 1 - 0 ID=LTnewLM_020010000.1:CDS:1;Parent=LTnewLM_020010000.1 ### LTnewLM_2 . polypeptide 203570 204403 . - . ID=LTnewLM_020010000.1:pep;Derives_from=LTnewLM_020010000.1;orthologous_to=LmjF.02.0450_mRNA;ortholog_cluster=OG0001882;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 208361 209236 1 - . ID=LTnewLM_020010100 LTnewLM_2 AUGUSTUS mRNA 208361 209236 1 - . ID=LTnewLM_020010100.1;Parent=LTnewLM_020010100 LTnewLM_2 AUGUSTUS CDS 208361 209236 1 - 0 ID=LTnewLM_020010100.1:CDS:1;Parent=LTnewLM_020010100.1 ### LTnewLM_2 . polypeptide 208361 209236 . - . ID=LTnewLM_020010100.1:pep;Derives_from=LTnewLM_020010100.1;orthologous_to=LmjF.02.0460_mRNA;ortholog_cluster=OG0001883;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 210606 221288 1 - . ID=LTnewLM_020010200 LTnewLM_2 AUGUSTUS mRNA 210606 221288 1 - . ID=LTnewLM_020010200.1;Parent=LTnewLM_020010200 LTnewLM_2 AUGUSTUS CDS 210606 221288 1 - 0 ID=LTnewLM_020010200.1:CDS:1;Parent=LTnewLM_020010200.1 ### LTnewLM_2 . polypeptide 210606 221288 . - . ID=LTnewLM_020010200.1:pep;Derives_from=LTnewLM_020010200.1;orthologous_to=LmjF.02.0470_mRNA;ortholog_cluster=OG0001884;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 222935 223540 1 - . ID=LTnewLM_020010300 LTnewLM_2 AUGUSTUS mRNA 222935 223540 1 - . ID=LTnewLM_020010300.1;Parent=LTnewLM_020010300 LTnewLM_2 AUGUSTUS CDS 222935 223540 1 - 0 ID=LTnewLM_020010300.1:CDS:1;Parent=LTnewLM_020010300.1 ### LTnewLM_2 . polypeptide 222935 223540 . - . ID=LTnewLM_020010300.1:pep;Derives_from=LTnewLM_020010300.1;orthologous_to=LmjF.02.0480_mRNA;ortholog_cluster=OG0001885;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 224394 227771 1 - . ID=LTnewLM_020010400 LTnewLM_2 AUGUSTUS mRNA 224394 227771 1 - . ID=LTnewLM_020010400.1;Parent=LTnewLM_020010400 LTnewLM_2 AUGUSTUS CDS 224394 227771 1 - 0 ID=LTnewLM_020010400.1:CDS:1;Parent=LTnewLM_020010400.1 ### LTnewLM_2 . polypeptide 224394 227771 . - . ID=LTnewLM_020010400.1:pep;Derives_from=LTnewLM_020010400.1;orthologous_to=LmjF.02.0490_mRNA;ortholog_cluster=OG0001886;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 228336 231185 1 - . ID=LTnewLM_020010500 LTnewLM_2 AUGUSTUS mRNA 228336 231185 1 - . ID=LTnewLM_020010500.1;Parent=LTnewLM_020010500 LTnewLM_2 AUGUSTUS CDS 228336 231185 1 - 0 ID=LTnewLM_020010500.1:CDS:1;Parent=LTnewLM_020010500.1 ### LTnewLM_2 . polypeptide 228336 231185 . - . ID=LTnewLM_020010500.1:pep;Derives_from=LTnewLM_020010500.1;orthologous_to=LmjF.02.0500_mRNA;ortholog_cluster=OG0001887;product=term%3DGlycerate kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02595;Ontology_term=GO:0031388,GO:0008887 LTnewLM_2 Pfam protein_match 229623 229733 . - . Parent=LTnewLM_020010500.1:pep;Name=PF02595;signature_desc=Glycerate kinase family;Ontology_term=GO:0008887,GO:0031388 LTnewLM_2 Pfam protein_match 230016 230615 . - . Parent=LTnewLM_020010500.1:pep;Name=PF02595;signature_desc=Glycerate kinase family;Ontology_term=GO:0008887,GO:0031388 ### LTnewLM_2 AUGUSTUS gene 232296 232808 1 - . ID=LTnewLM_020010600 LTnewLM_2 AUGUSTUS mRNA 232296 232808 1 - . ID=LTnewLM_020010600.1;Parent=LTnewLM_020010600 LTnewLM_2 AUGUSTUS CDS 232296 232808 1 - 0 ID=LTnewLM_020010600.1:CDS:1;Parent=LTnewLM_020010600.1 ### LTnewLM_2 . polypeptide 232296 232808 . - . ID=LTnewLM_020010600.1:pep;Derives_from=LTnewLM_020010600.1;orthologous_to=LmjF.02.0510_mRNA;ortholog_cluster=OG0001888;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 234416 240688 1 - . ID=LTnewLM_020010700 LTnewLM_2 AUGUSTUS mRNA 234416 240688 1 - . ID=LTnewLM_020010700.1;Parent=LTnewLM_020010700 LTnewLM_2 AUGUSTUS CDS 234416 240688 1 - 0 ID=LTnewLM_020010700.1:CDS:1;Parent=LTnewLM_020010700.1 ### LTnewLM_2 . polypeptide 234416 240688 . - . ID=LTnewLM_020010700.1:pep;Derives_from=LTnewLM_020010700.1;orthologous_to=LmjF.02.0520_mRNA;ortholog_cluster=OG0001889;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 Aragorn_1.2.36 gene 235648 235739 . + . ID=LTnewLM_020010800 LTnewLM_2 Aragorn_1.2.36 tRNA 235648 235739 . + . ID=LTnewLM_020010800:tRNA;Parent=LTnewLM_020010800;aa=Val;anticodon=gac;gc_content=68.5 ### LTnewLM_2 AUGUSTUS gene 246716 249250 1 - . ID=LTnewLM_020010900 LTnewLM_2 AUGUSTUS mRNA 246716 249250 1 - . ID=LTnewLM_020010900.1;Parent=LTnewLM_020010900 LTnewLM_2 AUGUSTUS CDS 246716 249250 1 - 0 ID=LTnewLM_020010900.1:CDS:1;Parent=LTnewLM_020010900.1 ### LTnewLM_2 . polypeptide 246716 249250 . - . ID=LTnewLM_020010900.1:pep;Derives_from=LTnewLM_020010900.1;orthologous_to=LmjF.02.0530_mRNA;ortholog_cluster=OG0001890;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 250974 252470 1 - . ID=LTnewLM_020011000 LTnewLM_2 AUGUSTUS mRNA 250974 252470 1 - . ID=LTnewLM_020011000.1;Parent=LTnewLM_020011000 LTnewLM_2 AUGUSTUS CDS 250974 252470 1 - 0 ID=LTnewLM_020011000.1:CDS:1;Parent=LTnewLM_020011000.1 ### LTnewLM_2 . polypeptide 250974 252470 . - . ID=LTnewLM_020011000.1:pep;Derives_from=LTnewLM_020011000.1;orthologous_to=LmjF.02.0540_mRNA;ortholog_cluster=OG0001891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 254499 254990 1 - . ID=LTnewLM_020011100 LTnewLM_2 AUGUSTUS mRNA 254499 254990 1 - . ID=LTnewLM_020011100.1;Parent=LTnewLM_020011100 LTnewLM_2 AUGUSTUS CDS 254499 254990 1 - 0 ID=LTnewLM_020011100.1:CDS:1;Parent=LTnewLM_020011100.1 ### LTnewLM_2 . polypeptide 254499 254990 . - . ID=LTnewLM_020011100.1:pep;Derives_from=LTnewLM_020011100.1;orthologous_to=LmjF.02.0550_mRNA;ortholog_cluster=OG0001892;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 256095 258638 1 - . ID=LTnewLM_020011200 LTnewLM_2 AUGUSTUS mRNA 256095 258638 1 - . ID=LTnewLM_020011200.1;Parent=LTnewLM_020011200 LTnewLM_2 AUGUSTUS CDS 256095 258638 1 - 0 ID=LTnewLM_020011200.1:CDS:1;Parent=LTnewLM_020011200.1 ### LTnewLM_2 . polypeptide 256095 258638 . - . ID=LTnewLM_020011200.1:pep;Derives_from=LTnewLM_020011200.1;orthologous_to=LmjF.02.0560_mRNA;ortholog_cluster=OG0001893;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 Liftoff gene 262146 266417 . - . ID=LTnewLM_020011300;coverage=0.998;sequence_ID=0.945;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.02.0570_0 LTnewLM_2 Liftoff mRNA 262146 266417 . - . ID=LTnewLM_020011300.1;Parent=LTnewLM_020011300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_2 Liftoff CDS 262146 266417 . - 0 ID=LTnewLM_020011300.1:CDS:1;Parent=LTnewLM_020011300.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 262146 266417 . - . ID=LTnewLM_020011300.1:pep;Derives_from=LTnewLM_020011300.1;orthologous_to=LmjF.02.0570_mRNA;ortholog_cluster=OG0001894;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_2 Pfam protein_match 262416 263039 . - . Parent=LTnewLM_020011300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_2 Pfam protein_match 262431 263048 . - . Parent=LTnewLM_020011300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_2 AUGUSTUS gene 296402 307768 1 + . ID=LTnewLM_020011400 LTnewLM_2 AUGUSTUS mRNA 296402 307768 1 + . ID=LTnewLM_020011400.1;Parent=LTnewLM_020011400 LTnewLM_2 AUGUSTUS CDS 296402 307768 1 + 0 ID=LTnewLM_020011400.1:CDS:1;Parent=LTnewLM_020011400.1 ### LTnewLM_2 . polypeptide 296402 307768 . + . ID=LTnewLM_020011400.1:pep;Derives_from=LTnewLM_020011400.1;orthologous_to=LmjF.02.0580_mRNA;ortholog_cluster=OG0001895;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 308531 310105 1 + . ID=LTnewLM_020011500 LTnewLM_2 AUGUSTUS mRNA 308531 310105 1 + . ID=LTnewLM_020011500.1;Parent=LTnewLM_020011500 LTnewLM_2 AUGUSTUS CDS 308531 310105 1 + 0 ID=LTnewLM_020011500.1:CDS:1;Parent=LTnewLM_020011500.1 ### LTnewLM_2 . polypeptide 308531 310105 . + . ID=LTnewLM_020011500.1:pep;Derives_from=LTnewLM_020011500.1;orthologous_to=LmjF.02.0590_mRNA;ortholog_cluster=OG0001896;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00515|Pfam:PF07719;Ontology_term=GO:0005515 LTnewLM_2 Pfam protein_match 309215 309310 . + . Parent=LTnewLM_020011500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_2 Pfam protein_match 309215 309310 . + . Parent=LTnewLM_020011500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat ### LTnewLM_2 AUGUSTUS gene 311156 311788 1 + . ID=LTnewLM_020011600 LTnewLM_2 AUGUSTUS mRNA 311156 311788 1 + . ID=LTnewLM_020011600.1;Parent=LTnewLM_020011600 LTnewLM_2 AUGUSTUS CDS 311156 311788 1 + 0 ID=LTnewLM_020011600.1:CDS:1;Parent=LTnewLM_020011600.1 ### LTnewLM_2 . polypeptide 311156 311788 . + . ID=LTnewLM_020011600.1:pep;Derives_from=LTnewLM_020011600.1;orthologous_to=LmjF.02.0600_mRNA;ortholog_cluster=OG0001897;product=term%3DARP2/3 complex 20 kDa subunit (ARPC4)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05856;Ontology_term=GO:0005885,GO:0030041,GO:0034314,GO:0015629 LTnewLM_2 Pfam protein_match 311156 311770 . + . Parent=LTnewLM_020011600.1:pep;Name=PF05856;signature_desc=ARP2/3 complex 20 kDa subunit (ARPC4);Ontology_term=GO:0030041,GO:0034314,GO:0005885,GO:0015629 ### LTnewLM_2 AUGUSTUS gene 313332 314297 1 + . ID=LTnewLM_020011700 LTnewLM_2 AUGUSTUS mRNA 313332 314297 1 + . ID=LTnewLM_020011700.1;Parent=LTnewLM_020011700 LTnewLM_2 AUGUSTUS CDS 313332 314297 1 + 0 ID=LTnewLM_020011700.1:CDS:1;Parent=LTnewLM_020011700.1 ### LTnewLM_2 . polypeptide 313332 314297 . + . ID=LTnewLM_020011700.1:pep;Derives_from=LTnewLM_020011700.1;orthologous_to=LmjF.02.0610_mRNA;ortholog_cluster=OG0001898;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 315426 317129 1 + . ID=LTnewLM_020011800 LTnewLM_2 AUGUSTUS mRNA 315426 317129 1 + . ID=LTnewLM_020011800.1;Parent=LTnewLM_020011800 LTnewLM_2 AUGUSTUS CDS 315426 317129 1 + 0 ID=LTnewLM_020011800.1:CDS:1;Parent=LTnewLM_020011800.1 ### LTnewLM_2 . polypeptide 315426 317129 . + . ID=LTnewLM_020011800.1:pep;Derives_from=LTnewLM_020011800.1;orthologous_to=LmjF.02.0620_mRNA;ortholog_cluster=OG0001899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 318084 320063 1 + . ID=LTnewLM_020011900 LTnewLM_2 AUGUSTUS mRNA 318084 320063 1 + . ID=LTnewLM_020011900.1;Parent=LTnewLM_020011900 LTnewLM_2 AUGUSTUS CDS 318084 320063 1 + 0 ID=LTnewLM_020011900.1:CDS:1;Parent=LTnewLM_020011900.1 ### LTnewLM_2 . polypeptide 318084 320063 . + . ID=LTnewLM_020011900.1:pep;Derives_from=LTnewLM_020011900.1;orthologous_to=LmjF.02.0630_mRNA;ortholog_cluster=OG0001900;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 321543 325772 1 + . ID=LTnewLM_020012000 LTnewLM_2 AUGUSTUS mRNA 321543 325772 1 + . ID=LTnewLM_020012000.1;Parent=LTnewLM_020012000 LTnewLM_2 AUGUSTUS CDS 321543 325772 1 + 0 ID=LTnewLM_020012000.1:CDS:1;Parent=LTnewLM_020012000.1 ### LTnewLM_2 . polypeptide 321543 325772 . + . ID=LTnewLM_020012000.1:pep;Derives_from=LTnewLM_020012000.1;orthologous_to=LmjF.02.0640_mRNA;ortholog_cluster=OG0001901;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 326302 327249 1 + . ID=LTnewLM_020012100 LTnewLM_2 AUGUSTUS mRNA 326302 327249 1 + . ID=LTnewLM_020012100.1;Parent=LTnewLM_020012100 LTnewLM_2 AUGUSTUS CDS 326302 327249 1 + 0 ID=LTnewLM_020012100.1:CDS:1;Parent=LTnewLM_020012100.1 ### LTnewLM_2 . polypeptide 326302 327249 . + . ID=LTnewLM_020012100.1:pep;Derives_from=LTnewLM_020012100.1;orthologous_to=LmjF.02.0650_mRNA;ortholog_cluster=OG0001902;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 328147 330879 1 + . ID=LTnewLM_020012200 LTnewLM_2 AUGUSTUS mRNA 328147 330879 1 + . ID=LTnewLM_020012200.1;Parent=LTnewLM_020012200 LTnewLM_2 AUGUSTUS CDS 328147 330879 1 + 0 ID=LTnewLM_020012200.1:CDS:1;Parent=LTnewLM_020012200.1 ### LTnewLM_2 . polypeptide 328147 330879 . + . ID=LTnewLM_020012200.1:pep;Derives_from=LTnewLM_020012200.1;orthologous_to=LmjF.02.0660_mRNA;ortholog_cluster=OG0001903;product=term%3DNop14-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04147;Ontology_term=GO:0032040 LTnewLM_2 Pfam protein_match 329665 330768 . + . Parent=LTnewLM_020012200.1:pep;Name=PF04147;signature_desc=Nop14-like family;Ontology_term=GO:0032040 ### LTnewLM_2 AUGUSTUS gene 331746 332687 1 + . ID=LTnewLM_020012300 LTnewLM_2 AUGUSTUS mRNA 331746 332687 1 + . ID=LTnewLM_020012300.1;Parent=LTnewLM_020012300 LTnewLM_2 AUGUSTUS CDS 331746 332687 1 + 0 ID=LTnewLM_020012300.1:CDS:1;Parent=LTnewLM_020012300.1 ### LTnewLM_2 . polypeptide 331746 332687 . + . ID=LTnewLM_020012300.1:pep;Derives_from=LTnewLM_020012300.1;orthologous_to=LmjF.02.0670_mRNA;ortholog_cluster=OG0001904;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_2 Pfam protein_match 332139 332378 . + . Parent=LTnewLM_020012300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_2 Pfam protein_match 332406 332669 . + . Parent=LTnewLM_020012300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_2 . pseudogene 334160 335659 . + . ID=LTnewLM_020012400:pseudogene;coverage=0.992;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0680_0;has_internal_stop=true LTnewLM_2 . pseudogenic_transcript 334160 335659 . + . ID=LTnewLM_020012400.1;Parent=LTnewLM_020012400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_2 . pseudogenic_exon 334160 335659 . + . ID=LTnewLM_020012400.1:pseudogenic_exon:1;Parent=LTnewLM_020012400.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 334160 335659 . + . ID=LTnewLM_020012400.1:pep;Derives_from=LTnewLM_020012400.1;orthologous_to=LmjF.02.0680_mRNA;ortholog_cluster=OG0007494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 336253 337617 1 + . ID=LTnewLM_020012500 LTnewLM_2 AUGUSTUS mRNA 336253 337617 1 + . ID=LTnewLM_020012500.1;Parent=LTnewLM_020012500 LTnewLM_2 AUGUSTUS CDS 336253 337617 1 + 0 ID=LTnewLM_020012500.1:CDS:1;Parent=LTnewLM_020012500.1 ### LTnewLM_2 . polypeptide 336253 337617 . + . ID=LTnewLM_020012500.1:pep;Derives_from=LTnewLM_020012500.1;orthologous_to=LTnewLM_270035300.1,LmjF.02.0690_mRNA,LmjF.27.2610_mRNA;ortholog_cluster=OG0000145;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 338405 341209 1 + . ID=LTnewLM_020012600 LTnewLM_2 AUGUSTUS mRNA 338405 341209 1 + . ID=LTnewLM_020012600.1;Parent=LTnewLM_020012600 LTnewLM_2 AUGUSTUS CDS 338405 341209 1 + 0 ID=LTnewLM_020012600.1:CDS:1;Parent=LTnewLM_020012600.1 ### LTnewLM_2 . polypeptide 338405 341209 . + . ID=LTnewLM_020012600.1:pep;Derives_from=LTnewLM_020012600.1;orthologous_to=LTnewLM_270035400.1,LmjF.02.0700_mRNA,LmjF.27.2620_mRNA;ortholog_cluster=OG0000146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 342898 345351 1 + . ID=LTnewLM_020012700 LTnewLM_2 AUGUSTUS mRNA 342898 345351 1 + . ID=LTnewLM_020012700.1;Parent=LTnewLM_020012700 LTnewLM_2 AUGUSTUS CDS 342898 345351 1 + 0 ID=LTnewLM_020012700.1:CDS:1;Parent=LTnewLM_020012700.1 ### LTnewLM_2 . polypeptide 342898 345351 . + . ID=LTnewLM_020012700.1:pep;Derives_from=LTnewLM_020012700.1;orthologous_to=LTnewLM_270035500.1,LmjF.02.0710_mRNA,LmjF.27.2630_mRNA;ortholog_cluster=OG0000147;product=term%3DATPase family associated with various cellular activities (AAA)/AAA lid domain/AAA domain (Cdc48 subfamily)/AAA domain (dynein-related subfamily)/C-terminal%2C D2-small domain%2C of ClpB protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17871|Pfam:PF07724|Pfam:PF07728|Pfam:PF10431;Ontology_term=GO:0016887,GO:0005524 LTnewLM_2 Pfam protein_match 343327 343731 . + . Parent=LTnewLM_020012700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_2 Pfam protein_match 343747 344049 . + . Parent=LTnewLM_020012700.1:pep;Name=PF17871;signature_desc=AAA lid domain LTnewLM_2 Pfam protein_match 344509 345000 . + . Parent=LTnewLM_020012700.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_2 Pfam protein_match 344524 344877 . + . Parent=LTnewLM_020012700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_2 Pfam protein_match 344527 344880 . + . Parent=LTnewLM_020012700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_2 Pfam protein_match 345019 345255 . + . Parent=LTnewLM_020012700.1:pep;Name=PF10431;signature_desc=C-terminal%2C D2-small domain%2C of ClpB protein ### LTnewLM_2 . pseudogene 346438 346679 . + . ID=LTnewLM_020012800:pseudogene;coverage=0.995;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0720_0;has_internal_stop=true LTnewLM_2 . pseudogenic_transcript 346438 346679 . + . ID=LTnewLM_020012800.1;Parent=LTnewLM_020012800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_2 . pseudogenic_exon 346438 346679 . + . ID=LTnewLM_020012800.1:pseudogenic_exon:1;Parent=LTnewLM_020012800.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 346438 346679 . + . ID=LTnewLM_020012800.1:pep;Derives_from=LTnewLM_020012800.1;product=term%3Dhypothetical protein ### LTnewLM_2 AUGUSTUS gene 347855 348398 0.67 + . ID=LTnewLM_020012900 LTnewLM_2 AUGUSTUS mRNA 347855 348398 0.67 + . ID=LTnewLM_020012900.1;Parent=LTnewLM_020012900 LTnewLM_2 AUGUSTUS CDS 347855 348138 0.69 + 0 ID=LTnewLM_020012900.1:CDS:1;Parent=LTnewLM_020012900.1 LTnewLM_2 AUGUSTUS CDS 348293 348398 0.88 + 1 ID=LTnewLM_020012900.1:CDS:2;Parent=LTnewLM_020012900.1 ### LTnewLM_2 . polypeptide 347855 348398 . + . ID=LTnewLM_020012900.1:pep;Derives_from=LTnewLM_020012900.1;orthologous_to=LTnewLM_270035700.1,LmjF.27.2650_mRNA;ortholog_cluster=OG0000376;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 348814 349308 1 + . ID=LTnewLM_020013000 LTnewLM_2 AUGUSTUS mRNA 348814 349308 1 + . ID=LTnewLM_020013000.1;Parent=LTnewLM_020013000 LTnewLM_2 AUGUSTUS CDS 348814 349308 1 + 0 ID=LTnewLM_020013000.1:CDS:1;Parent=LTnewLM_020013000.1 ### LTnewLM_2 . polypeptide 348814 349308 . + . ID=LTnewLM_020013000.1:pep;Derives_from=LTnewLM_020013000.1;orthologous_to=LTnewLM_270035800.1;ortholog_cluster=OG0001905;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 . pseudogene 351205 353240 . + . ID=LTnewLM_020013100:pseudogene;coverage=0.998;sequence_ID=0.969;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0740_0;has_internal_stop=true LTnewLM_2 . pseudogenic_transcript 351205 353240 . + . ID=LTnewLM_020013100.1;Parent=LTnewLM_020013100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_2 . pseudogenic_exon 351205 353240 . + . ID=LTnewLM_020013100.1:pseudogenic_exon:1;Parent=LTnewLM_020013100.1;extra_copy_number=0 ### LTnewLM_2 . polypeptide 351205 353240 . + . ID=LTnewLM_020013100.1:pep;Derives_from=LTnewLM_020013100.1;orthologous_to=LTnewLM_010013600.1,LTnewLM_270036000.1,LmjF.01.0830_mRNA,LmjF.02.0740_mRNA,LmjF.27.2660_mRNA;ortholog_cluster=OG0000077;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_2 AUGUSTUS gene 355069 355865 0.77 + . ID=LTnewLM_020013200 LTnewLM_2 AUGUSTUS mRNA 355069 355865 0.77 + . ID=LTnewLM_020013200.1;Parent=LTnewLM_020013200 LTnewLM_2 AUGUSTUS CDS 355069 355501 0.89 + 0 ID=LTnewLM_020013200.1:CDS:1;Parent=LTnewLM_020013200.1 LTnewLM_2 AUGUSTUS CDS 355774 355865 0.79 + 2 ID=LTnewLM_020013200.1:CDS:2;Parent=LTnewLM_020013200.1 ### LTnewLM_2 . polypeptide 355069 355865 . + . ID=LTnewLM_020013200.1:pep;Derives_from=LTnewLM_020013200.1;orthologous_to=LTnewLM_190022800.1,LTnewLM_220023000.1,LmjF.05.1225_mRNA;ortholog_cluster=OG0000142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . contig 1 760567 . + . Name=LTnewLM_CTG000020 LTnewLM_20 AUGUSTUS gene 7064 10462 1 - . ID=LTnewLM_200005000 LTnewLM_20 AUGUSTUS mRNA 7064 10462 1 - . ID=LTnewLM_200005000.1;Parent=LTnewLM_200005000 LTnewLM_20 AUGUSTUS CDS 7064 10462 1 - 0 ID=LTnewLM_200005000.1:CDS:1;Parent=LTnewLM_200005000.1 ### LTnewLM_20 . polypeptide 7064 10462 . - . ID=LTnewLM_200005000.1:pep;Derives_from=LTnewLM_200005000.1;orthologous_to=LmjF.20.0010_mRNA;ortholog_cluster=OG0001906;product=term%3DRNA polymerase beta subunit/RNA polymerase Rpb2%2C domain 2/RNA polymerase Rpb2%2C domain 3/RNA polymerase Rpb2%2C domain 4/RNA polymerase Rpb2%2C domain 5/RNA polymerase Rpb2%2C domain 6/RNA polymerase Rpb2%2C domain 7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04563|Pfam:PF04561|Pfam:PF04565|Pfam:PF04566|Pfam:PF04567|Pfam:PF00562|Pfam:PF04560;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_20 Pfam protein_match 7085 7336 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04560;signature_desc=RNA polymerase Rpb2%2C domain 7;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 7343 8431 . - . Parent=LTnewLM_200005000.1:pep;Name=PF00562;signature_desc=RNA polymerase Rpb2%2C domain 6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 8480 8569 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04567;signature_desc=RNA polymerase Rpb2%2C domain 5;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 8639 8818 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04566;signature_desc=RNA polymerase Rpb2%2C domain 4;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 8924 9115 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04565;signature_desc=RNA polymerase Rpb2%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 9209 10369 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04563;signature_desc=RNA polymerase beta subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_20 Pfam protein_match 9356 9910 . - . Parent=LTnewLM_200005000.1:pep;Name=PF04561;signature_desc=RNA polymerase Rpb2%2C domain 2;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_20 AUGUSTUS gene 11097 12335 1 - . ID=LTnewLM_200005100 LTnewLM_20 AUGUSTUS mRNA 11097 12335 1 - . ID=LTnewLM_200005100.1;Parent=LTnewLM_200005100 LTnewLM_20 AUGUSTUS CDS 11097 12335 1 - 0 ID=LTnewLM_200005100.1:CDS:1;Parent=LTnewLM_200005100.1 ### LTnewLM_20 . polypeptide 11097 12335 . - . ID=LTnewLM_200005100.1:pep;Derives_from=LTnewLM_200005100.1;orthologous_to=LmjF.20.0020_mRNA;ortholog_cluster=OG0001907;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 11772 11867 . - . Parent=LTnewLM_200005100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 11919 12029 . - . Parent=LTnewLM_200005100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 12045 12131 . - . Parent=LTnewLM_200005100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_20 AUGUSTUS gene 13336 14175 1 - . ID=LTnewLM_200005200 LTnewLM_20 AUGUSTUS mRNA 13336 14175 1 - . ID=LTnewLM_200005200.1;Parent=LTnewLM_200005200 LTnewLM_20 AUGUSTUS CDS 13336 14175 1 - 0 ID=LTnewLM_200005200.1:CDS:1;Parent=LTnewLM_200005200.1 ### LTnewLM_20 . polypeptide 13336 14175 . - . ID=LTnewLM_200005200.1:pep;Derives_from=LTnewLM_200005200.1;orthologous_to=LmjF.20.0030_mRNA;ortholog_cluster=OG0001908;product=term%3DHistone methylation protein DOT1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08123;Ontology_term=GO:0018024 LTnewLM_20 Pfam protein_match 13354 13878 . - . Parent=LTnewLM_200005200.1:pep;Name=PF08123;signature_desc=Histone methylation protein DOT1;Ontology_term=GO:0018024 ### LTnewLM_20 AUGUSTUS gene 16118 17746 1 - . ID=LTnewLM_200005300 LTnewLM_20 AUGUSTUS mRNA 16118 17746 1 - . ID=LTnewLM_200005300.1;Parent=LTnewLM_200005300 LTnewLM_20 AUGUSTUS CDS 16118 17746 1 - 0 ID=LTnewLM_200005300.1:CDS:1;Parent=LTnewLM_200005300.1 ### LTnewLM_20 . polypeptide 16118 17746 . - . ID=LTnewLM_200005300.1:pep;Derives_from=LTnewLM_200005300.1;orthologous_to=LTnewLM_100005300.1,LTnewLM_100021000.1,LmjF.10.0030_mRNA,LmjF.10.1300_mRNA;ortholog_cluster=OG0000079;product=term%3DPhosphate transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01384;Ontology_term=GO:0006817,GO:0016020,GO:0005315 LTnewLM_20 Pfam protein_match 16163 17680 . - . Parent=LTnewLM_200005300.1:pep;Name=PF01384;signature_desc=Phosphate transporter family;Ontology_term=GO:0005315,GO:0006817,GO:0016020 ### LTnewLM_20 Liftoff gene 18655 19626 . - . ID=LTnewLM_200005400;coverage=1.0;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.0040_0 LTnewLM_20 Liftoff mRNA 18655 19626 . - . ID=LTnewLM_200005400.1;Parent=LTnewLM_200005400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_20 Liftoff CDS 18655 19626 . - 0 ID=LTnewLM_200005400.1:CDS:1;Parent=LTnewLM_200005400.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 18655 19626 . - . ID=LTnewLM_200005400.1:pep;Derives_from=LTnewLM_200005400.1;orthologous_to=LmjF.20.0040_mRNA;ortholog_cluster=OG0001909;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 21094 21570 1 - . ID=LTnewLM_200005500 LTnewLM_20 AUGUSTUS mRNA 21094 21570 1 - . ID=LTnewLM_200005500.1;Parent=LTnewLM_200005500 LTnewLM_20 AUGUSTUS CDS 21094 21570 1 - 0 ID=LTnewLM_200005500.1:CDS:1;Parent=LTnewLM_200005500.1 ### LTnewLM_20 . polypeptide 21094 21570 . - . ID=LTnewLM_200005500.1:pep;Derives_from=LTnewLM_200005500.1;orthologous_to=LmjF.20.0050_mRNA;ortholog_cluster=OG0001910;product=term%3DASF1 like histone chaperone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04729;Ontology_term=GO:0006333,GO:0005634 LTnewLM_20 Pfam protein_match 21106 21555 . - . Parent=LTnewLM_200005500.1:pep;Name=PF04729;signature_desc=ASF1 like histone chaperone;Ontology_term=GO:0006333,GO:0005634 ### LTnewLM_20 AUGUSTUS gene 22554 26052 0.62 - . ID=LTnewLM_200005600 LTnewLM_20 AUGUSTUS mRNA 22554 26052 0.62 - . ID=LTnewLM_200005600.1;Parent=LTnewLM_200005600 LTnewLM_20 AUGUSTUS CDS 22554 23243 0.88 - 0 ID=LTnewLM_200005600.1:CDS:1;Parent=LTnewLM_200005600.1 LTnewLM_20 AUGUSTUS CDS 23344 26052 0.62 - 0 ID=LTnewLM_200005600.1:CDS:2;Parent=LTnewLM_200005600.1 ### LTnewLM_20 . polypeptide 22554 26052 . - . ID=LTnewLM_200005600.1:pep;Derives_from=LTnewLM_200005600.1;orthologous_to=LmjF.20.0060_mRNA;ortholog_cluster=OG0001911;product=term%3DBRCA2 repeat/BRCA2%2C oligonucleotide/oligosaccharide-binding%2C domain 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00634|Pfam:PF09103;Ontology_term=GO:0000724 LTnewLM_20 Pfam protein_match 24454 24783 . - . Parent=LTnewLM_200005600.1:pep;Name=PF09103;signature_desc=BRCA2%2C oligonucleotide/oligosaccharide-binding%2C domain 1;Ontology_term=GO:0000724 LTnewLM_20 Pfam protein_match 25663 25725 . - . Parent=LTnewLM_200005600.1:pep;Name=PF00634;signature_desc=BRCA2 repeat ### LTnewLM_20 AUGUSTUS gene 27099 27710 1 - . ID=LTnewLM_200005700 LTnewLM_20 AUGUSTUS mRNA 27099 27710 1 - . ID=LTnewLM_200005700.1;Parent=LTnewLM_200005700 LTnewLM_20 AUGUSTUS CDS 27099 27710 1 - 0 ID=LTnewLM_200005700.1:CDS:1;Parent=LTnewLM_200005700.1 ### LTnewLM_20 . polypeptide 27099 27710 . - . ID=LTnewLM_200005700.1:pep;Derives_from=LTnewLM_200005700.1;orthologous_to=LmjF.20.0070_mRNA;ortholog_cluster=OG0001912;product=term%3DMRG%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05712 LTnewLM_20 Pfam protein_match 27114 27512 . - . Parent=LTnewLM_200005700.1:pep;Name=PF05712;signature_desc=MRG ### LTnewLM_20 AUGUSTUS gene 29329 31056 1 - . ID=LTnewLM_200005800 LTnewLM_20 AUGUSTUS mRNA 29329 31056 1 - . ID=LTnewLM_200005800.1;Parent=LTnewLM_200005800 LTnewLM_20 AUGUSTUS CDS 29329 31056 1 - 0 ID=LTnewLM_200005800.1:CDS:1;Parent=LTnewLM_200005800.1 ### LTnewLM_20 . polypeptide 29329 31056 . - . ID=LTnewLM_200005800.1:pep;Derives_from=LTnewLM_200005800.1;orthologous_to=LmjF.20.0080_mRNA;ortholog_cluster=OG0001913;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 33413 36745 1 - . ID=LTnewLM_200005900 LTnewLM_20 AUGUSTUS mRNA 33413 36745 1 - . ID=LTnewLM_200005900.1;Parent=LTnewLM_200005900 LTnewLM_20 AUGUSTUS CDS 33413 36745 1 - 0 ID=LTnewLM_200005900.1:CDS:1;Parent=LTnewLM_200005900.1 ### LTnewLM_20 . polypeptide 33413 36745 . - . ID=LTnewLM_200005900.1:pep;Derives_from=LTnewLM_200005900.1;orthologous_to=LmjF.20.0090_mRNA;ortholog_cluster=OG0001914;product=term%3DIon channel/Calcium-activated BK potassium channel alpha subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07885|Pfam:PF03493;Ontology_term=GO:0015269,GO:0016020,GO:0006813 LTnewLM_20 Pfam protein_match 35045 35308 . - . Parent=LTnewLM_200005900.1:pep;Name=PF03493;signature_desc=Calcium-activated BK potassium channel alpha subunit;Ontology_term=GO:0015269,GO:0006813,GO:0016020 LTnewLM_20 Pfam protein_match 35741 35959 . - . Parent=LTnewLM_200005900.1:pep;Name=PF07885;signature_desc=Ion channel ### LTnewLM_20 AUGUSTUS gene 39291 40730 1 - . ID=LTnewLM_200006000 LTnewLM_20 AUGUSTUS mRNA 39291 40730 1 - . ID=LTnewLM_200006000.1;Parent=LTnewLM_200006000 LTnewLM_20 AUGUSTUS CDS 39291 40730 1 - 0 ID=LTnewLM_200006000.1:CDS:1;Parent=LTnewLM_200006000.1 ### LTnewLM_20 . polypeptide 39291 40730 . - . ID=LTnewLM_200006000.1:pep;Derives_from=LTnewLM_200006000.1;orthologous_to=LTnewLM_200006100.1,LTnewLM_200006100.2,LTnewLM_270023300.1,LmjF.20.0100_mRNA,LmjF.20.0110.1_mRNA,LmjF.20.0110.2_mRNA;ortholog_cluster=OG0000040;product=term%3DPhosphoglycerate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00162;Ontology_term=GO:0006096,GO:0004618 LTnewLM_20 Pfam protein_match 39519 40706 . - . Parent=LTnewLM_200006000.1:pep;Name=PF00162;signature_desc=Phosphoglycerate kinase;Ontology_term=GO:0004618,GO:0006096 ### LTnewLM_20 . polypeptide 42122 43375 . - . ID=LTnewLM_200006100.1:pep;Derives_from=LTnewLM_200006100.1;orthologous_to=LTnewLM_200006000.1,LTnewLM_200006100.2,LTnewLM_270023300.1,LmjF.20.0100_mRNA,LmjF.20.0110.1_mRNA,LmjF.20.0110.2_mRNA;ortholog_cluster=OG0000040;product=term%3DPhosphoglycerate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00162;Ontology_term=GO:0006096,GO:0004618 LTnewLM_20 Pfam protein_match 42164 43351 . - . Parent=LTnewLM_200006100.1:pep;Name=PF00162;signature_desc=Phosphoglycerate kinase;Ontology_term=GO:0004618,GO:0006096 ### LTnewLM_20 . polypeptide 42122 43462 . - . ID=LTnewLM_200006100.2:pep;Derives_from=LTnewLM_200006100.2;orthologous_to=LTnewLM_200006000.1,LTnewLM_200006100.1,LTnewLM_270023300.1,LmjF.20.0100_mRNA,LmjF.20.0110.1_mRNA,LmjF.20.0110.2_mRNA;ortholog_cluster=OG0000040;product=term%3DPhosphoglycerate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00162;Ontology_term=GO:0006096,GO:0004618 LTnewLM_20 Pfam protein_match 42164 43351 . - . Parent=LTnewLM_200006100.2:pep;Name=PF00162;signature_desc=Phosphoglycerate kinase;Ontology_term=GO:0004618,GO:0006096 ### LTnewLM_20 . pseudogene 42122 43490 . - . ID=LTnewLM_200006100:pseudogene;coverage=1.0;sequence_ID=0.962;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.0110_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 42122 43445 . - . ID=LTnewLM_200006100.1;Parent=LTnewLM_200006100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 42122 43375 . - . ID=LTnewLM_200006100.1:pseudogenic_exon:1;Parent=LTnewLM_200006100.1;extra_copy_number=0 LTnewLM_20 . pseudogenic_transcript 42122 43490 . - . ID=LTnewLM_200006100.2;Parent=LTnewLM_200006100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 42122 43462 . - . ID=LTnewLM_200006100.2:pseudogenic_exon:1;Parent=LTnewLM_200006100.2;extra_copy_number=0 ### LTnewLM_20 AUGUSTUS gene 46168 47838 1 - . ID=LTnewLM_200006200 LTnewLM_20 AUGUSTUS mRNA 46168 47838 1 - . ID=LTnewLM_200006200.1;Parent=LTnewLM_200006200 LTnewLM_20 AUGUSTUS CDS 46168 47838 1 - 0 ID=LTnewLM_200006200.1:CDS:1;Parent=LTnewLM_200006200.1 ### LTnewLM_20 . polypeptide 46168 47838 . - . ID=LTnewLM_200006200.1:pep;Derives_from=LTnewLM_200006200.1;orthologous_to=LmjF.20.0120_mRNA;ortholog_cluster=OG0001915;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 48798 50132 1 - . ID=LTnewLM_200006300 LTnewLM_20 AUGUSTUS mRNA 48798 50132 1 - . ID=LTnewLM_200006300.1;Parent=LTnewLM_200006300 LTnewLM_20 AUGUSTUS CDS 48798 50132 1 - 0 ID=LTnewLM_200006300.1:CDS:1;Parent=LTnewLM_200006300.1 ### LTnewLM_20 . polypeptide 48798 50132 . - . ID=LTnewLM_200006300.1:pep;Derives_from=LTnewLM_200006300.1;orthologous_to=LmjF.20.0130_mRNA;ortholog_cluster=OG0001916;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_20 Pfam protein_match 49461 49511 . - . Parent=LTnewLM_200006300.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 49653 49715 . - . Parent=LTnewLM_200006300.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_20 AUGUSTUS gene 51897 55556 1 - . ID=LTnewLM_200006400 LTnewLM_20 AUGUSTUS mRNA 51897 55556 1 - . ID=LTnewLM_200006400.1;Parent=LTnewLM_200006400 LTnewLM_20 AUGUSTUS CDS 51897 55556 1 - 0 ID=LTnewLM_200006400.1:CDS:1;Parent=LTnewLM_200006400.1 ### LTnewLM_20 . polypeptide 51897 55556 . - . ID=LTnewLM_200006400.1:pep;Derives_from=LTnewLM_200006400.1;orthologous_to=LmjF.20.0140_mRNA;ortholog_cluster=OG0001917;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 57548 60274 1 - . ID=LTnewLM_200006500 LTnewLM_20 AUGUSTUS mRNA 57548 60274 1 - . ID=LTnewLM_200006500.1;Parent=LTnewLM_200006500 LTnewLM_20 AUGUSTUS CDS 57548 60274 1 - 0 ID=LTnewLM_200006500.1:CDS:1;Parent=LTnewLM_200006500.1 ### LTnewLM_20 . polypeptide 57548 60274 . - . ID=LTnewLM_200006500.1:pep;Derives_from=LTnewLM_200006500.1;orthologous_to=LmjF.20.0150_mRNA;ortholog_cluster=OG0001918;product=term%3DProtein O-mannosyl-transferase TMTC%2C DUF1736%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08409 LTnewLM_20 Pfam protein_match 59051 59263 . - . Parent=LTnewLM_200006500.1:pep;Name=PF08409;signature_desc=Protein O-mannosyl-transferase TMTC%2C DUF1736 ### LTnewLM_20 AUGUSTUS gene 61940 64357 1 - . ID=LTnewLM_200006600 LTnewLM_20 AUGUSTUS mRNA 61940 64357 1 - . ID=LTnewLM_200006600.1;Parent=LTnewLM_200006600 LTnewLM_20 AUGUSTUS CDS 61940 64357 1 - 0 ID=LTnewLM_200006600.1:CDS:1;Parent=LTnewLM_200006600.1 ### LTnewLM_20 . polypeptide 61940 64357 . - . ID=LTnewLM_200006600.1:pep;Derives_from=LTnewLM_200006600.1;orthologous_to=LmjF.20.0160_mRNA;ortholog_cluster=OG0001919;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 65253 66371 1 - . ID=LTnewLM_200006700 LTnewLM_20 AUGUSTUS mRNA 65253 66371 1 - . ID=LTnewLM_200006700.1;Parent=LTnewLM_200006700 LTnewLM_20 AUGUSTUS CDS 65253 66371 1 - 0 ID=LTnewLM_200006700.1:CDS:1;Parent=LTnewLM_200006700.1 ### LTnewLM_20 . polypeptide 65253 66371 . - . ID=LTnewLM_200006700.1:pep;Derives_from=LTnewLM_200006700.1;orthologous_to=LmjF.20.0170_mRNA;ortholog_cluster=OG0001920;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 67376 69964 1 - . ID=LTnewLM_200006800 LTnewLM_20 AUGUSTUS mRNA 67376 69964 1 - . ID=LTnewLM_200006800.1;Parent=LTnewLM_200006800 LTnewLM_20 AUGUSTUS CDS 67376 69964 1 - 0 ID=LTnewLM_200006800.1:CDS:1;Parent=LTnewLM_200006800.1 ### LTnewLM_20 . polypeptide 67376 69964 . - . ID=LTnewLM_200006800.1:pep;Derives_from=LTnewLM_200006800.1;orthologous_to=LmjF.20.0180_mRNA;ortholog_cluster=OG0001921;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 70991 71593 1 - . ID=LTnewLM_200006900 LTnewLM_20 AUGUSTUS mRNA 70991 71593 1 - . ID=LTnewLM_200006900.1;Parent=LTnewLM_200006900 LTnewLM_20 AUGUSTUS CDS 70991 71593 1 - 0 ID=LTnewLM_200006900.1:CDS:1;Parent=LTnewLM_200006900.1 ### LTnewLM_20 . polypeptide 70991 71593 . - . ID=LTnewLM_200006900.1:pep;Derives_from=LTnewLM_200006900.1;orthologous_to=LmjF.20.0190_mRNA;ortholog_cluster=OG0001922;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 72196 74772 1 - . ID=LTnewLM_200007000 LTnewLM_20 AUGUSTUS mRNA 72196 74772 1 - . ID=LTnewLM_200007000.1;Parent=LTnewLM_200007000 LTnewLM_20 AUGUSTUS CDS 72196 74772 1 - 0 ID=LTnewLM_200007000.1:CDS:1;Parent=LTnewLM_200007000.1 ### LTnewLM_20 . polypeptide 72196 74772 . - . ID=LTnewLM_200007000.1:pep;Derives_from=LTnewLM_200007000.1;orthologous_to=LmjF.20.0200_mRNA;ortholog_cluster=OG0001923;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 75621 76874 1 - . ID=LTnewLM_200007100 LTnewLM_20 AUGUSTUS mRNA 75621 76874 1 - . ID=LTnewLM_200007100.1;Parent=LTnewLM_200007100 LTnewLM_20 AUGUSTUS CDS 75621 76874 1 - 0 ID=LTnewLM_200007100.1:CDS:1;Parent=LTnewLM_200007100.1 ### LTnewLM_20 . polypeptide 75621 76874 . - . ID=LTnewLM_200007100.1:pep;Derives_from=LTnewLM_200007100.1;orthologous_to=LmjF.20.0210_mRNA;ortholog_cluster=OG0001924;product=term%3DGalactose oxidase%2C central domain/Kelch motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13418|Pfam:PF13854|Pfam:PF01344;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 76107 76256 . - . Parent=LTnewLM_200007100.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 76500 76607 . - . Parent=LTnewLM_200007100.1:pep;Name=PF13854;signature_desc=Kelch motif LTnewLM_20 Pfam protein_match 76638 76760 . - . Parent=LTnewLM_200007100.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain ### LTnewLM_20 AUGUSTUS gene 79593 82442 1 - . ID=LTnewLM_200007200 LTnewLM_20 AUGUSTUS mRNA 79593 82442 1 - . ID=LTnewLM_200007200.1;Parent=LTnewLM_200007200 LTnewLM_20 AUGUSTUS CDS 79593 82442 1 - 0 ID=LTnewLM_200007200.1:CDS:1;Parent=LTnewLM_200007200.1 ### LTnewLM_20 . polypeptide 79593 82442 . - . ID=LTnewLM_200007200.1:pep;Derives_from=LTnewLM_200007200.1;orthologous_to=LmjF.20.0220_mRNA;ortholog_cluster=OG0001925;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 83397 83972 1 - . ID=LTnewLM_200007300 LTnewLM_20 AUGUSTUS mRNA 83397 83972 1 - . ID=LTnewLM_200007300.1;Parent=LTnewLM_200007300 LTnewLM_20 AUGUSTUS CDS 83397 83972 1 - 0 ID=LTnewLM_200007300.1:CDS:1;Parent=LTnewLM_200007300.1 ### LTnewLM_20 . polypeptide 83397 83972 . - . ID=LTnewLM_200007300.1:pep;Derives_from=LTnewLM_200007300.1;orthologous_to=LmjF.20.0230_mRNA;ortholog_cluster=OG0001926;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 84969 85754 1 - . ID=LTnewLM_200007400 LTnewLM_20 AUGUSTUS mRNA 84969 85754 1 - . ID=LTnewLM_200007400.1;Parent=LTnewLM_200007400 LTnewLM_20 AUGUSTUS CDS 84969 85754 1 - 0 ID=LTnewLM_200007400.1:CDS:1;Parent=LTnewLM_200007400.1 ### LTnewLM_20 . polypeptide 84969 85754 . - . ID=LTnewLM_200007400.1:pep;Derives_from=LTnewLM_200007400.1;orthologous_to=LmjF.20.0240_mRNA;ortholog_cluster=OG0001927;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 86510 87649 1 - . ID=LTnewLM_200007500 LTnewLM_20 AUGUSTUS mRNA 86510 87649 1 - . ID=LTnewLM_200007500.1;Parent=LTnewLM_200007500 LTnewLM_20 AUGUSTUS CDS 86510 87649 1 - 0 ID=LTnewLM_200007500.1:CDS:1;Parent=LTnewLM_200007500.1 ### LTnewLM_20 . polypeptide 86510 87649 . - . ID=LTnewLM_200007500.1:pep;Derives_from=LTnewLM_200007500.1;orthologous_to=LmjF.20.0250_mRNA;ortholog_cluster=OG0001928;product=term%3DDeoxyhypusine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01916;Ontology_term=GO:0008612 LTnewLM_20 Pfam protein_match 86555 87427 . - . Parent=LTnewLM_200007500.1:pep;Name=PF01916;signature_desc=Deoxyhypusine synthase;Ontology_term=GO:0008612 ### LTnewLM_20 AUGUSTUS gene 89711 104188 1 - . ID=LTnewLM_200007600 LTnewLM_20 AUGUSTUS mRNA 89711 104188 1 - . ID=LTnewLM_200007600.1;Parent=LTnewLM_200007600 LTnewLM_20 AUGUSTUS CDS 89711 104188 1 - 0 ID=LTnewLM_200007600.1:CDS:1;Parent=LTnewLM_200007600.1 ### LTnewLM_20 . polypeptide 89711 104188 . - . ID=LTnewLM_200007600.1:pep;Derives_from=LTnewLM_200007600.1;orthologous_to=LmjF.20.0260_mRNA;ortholog_cluster=OG0001929;product=term%3DAAA domain (dynein-related subfamily)/Midasin AAA lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF17867|Pfam:PF17865;Ontology_term=GO:0016887,GO:0005524 LTnewLM_20 Pfam protein_match 98603 99010 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 99230 99520 . - . Parent=LTnewLM_200007600.1:pep;Name=PF17867;signature_desc=Midasin AAA lid domain LTnewLM_20 Pfam protein_match 99557 99811 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 99848 100069 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 100604 101029 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 101204 101473 . - . Parent=LTnewLM_200007600.1:pep;Name=PF17867;signature_desc=Midasin AAA lid domain LTnewLM_20 Pfam protein_match 101510 101917 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 102107 102409 . - . Parent=LTnewLM_200007600.1:pep;Name=PF17865;signature_desc=Midasin AAA lid domain LTnewLM_20 Pfam protein_match 102449 102706 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 102995 103132 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_20 Pfam protein_match 103337 103603 . - . Parent=LTnewLM_200007600.1:pep;Name=PF17867;signature_desc=Midasin AAA lid domain LTnewLM_20 Pfam protein_match 103763 104113 . - . Parent=LTnewLM_200007600.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_20 AUGUSTUS gene 105510 106298 1 + . ID=LTnewLM_200007700 LTnewLM_20 AUGUSTUS mRNA 105510 106298 1 + . ID=LTnewLM_200007700.1;Parent=LTnewLM_200007700 LTnewLM_20 AUGUSTUS CDS 105510 106298 1 + 0 ID=LTnewLM_200007700.1:CDS:1;Parent=LTnewLM_200007700.1 ### LTnewLM_20 . polypeptide 105510 106298 . + . ID=LTnewLM_200007700.1:pep;Derives_from=LTnewLM_200007700.1;orthologous_to=LmjF.20.0265_mRNA;ortholog_cluster=OG0001930;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 106636 107739 1 + . ID=LTnewLM_200007800 LTnewLM_20 AUGUSTUS mRNA 106636 107739 1 + . ID=LTnewLM_200007800.1;Parent=LTnewLM_200007800 LTnewLM_20 AUGUSTUS CDS 106636 107739 1 + 0 ID=LTnewLM_200007800.1:CDS:1;Parent=LTnewLM_200007800.1 ### LTnewLM_20 . polypeptide 106636 107739 . + . ID=LTnewLM_200007800.1:pep;Derives_from=LTnewLM_200007800.1;orthologous_to=LmjF.20.0270_mRNA;ortholog_cluster=OG0001931;product=term%3DCalmodulin-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13864 LTnewLM_20 Pfam protein_match 107338 107640 . + . Parent=LTnewLM_200007800.1:pep;Name=PF13864;signature_desc=Calmodulin-binding ### LTnewLM_20 AUGUSTUS gene 108237 109598 1 + . ID=LTnewLM_200007900 LTnewLM_20 AUGUSTUS mRNA 108237 109598 1 + . ID=LTnewLM_200007900.1;Parent=LTnewLM_200007900 LTnewLM_20 AUGUSTUS CDS 108237 109598 1 + 0 ID=LTnewLM_200007900.1:CDS:1;Parent=LTnewLM_200007900.1 ### LTnewLM_20 . polypeptide 108237 109598 . + . ID=LTnewLM_200007900.1:pep;Derives_from=LTnewLM_200007900.1;orthologous_to=LmjF.20.0280_mRNA;ortholog_cluster=OG0001932;product=term%3DMitochondrial branched-chain alpha-ketoacid dehydrogenase kinase/Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10436|Pfam:PF02518 LTnewLM_20 Pfam protein_match 108480 108938 . + . Parent=LTnewLM_200007900.1:pep;Name=PF10436;signature_desc=Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase LTnewLM_20 Pfam protein_match 109140 109553 . + . Parent=LTnewLM_200007900.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_20 AUGUSTUS gene 111558 113957 1 + . ID=LTnewLM_200008000 LTnewLM_20 AUGUSTUS mRNA 111558 113957 1 + . ID=LTnewLM_200008000.1;Parent=LTnewLM_200008000 LTnewLM_20 AUGUSTUS CDS 111558 113957 1 + 0 ID=LTnewLM_200008000.1:CDS:1;Parent=LTnewLM_200008000.1 ### LTnewLM_20 . polypeptide 111558 113957 . + . ID=LTnewLM_200008000.1:pep;Derives_from=LTnewLM_200008000.1;orthologous_to=LmjF.20.0290_mRNA;ortholog_cluster=OG0001933;product=term%3DZinc finger%2C ZZ type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00569;Ontology_term=GO:0008270 LTnewLM_20 Pfam protein_match 113613 113705 . + . Parent=LTnewLM_200008000.1:pep;Name=PF00569;signature_desc=Zinc finger%2C ZZ type;Ontology_term=GO:0008270 ### LTnewLM_20 AUGUSTUS gene 114808 116043 1 + . ID=LTnewLM_200008100 LTnewLM_20 AUGUSTUS mRNA 114808 116043 1 + . ID=LTnewLM_200008100.1;Parent=LTnewLM_200008100 LTnewLM_20 AUGUSTUS CDS 114808 116043 1 + 0 ID=LTnewLM_200008100.1:CDS:1;Parent=LTnewLM_200008100.1 ### LTnewLM_20 . polypeptide 114808 116043 . + . ID=LTnewLM_200008100.1:pep;Derives_from=LTnewLM_200008100.1;orthologous_to=LmjF.20.0300_mRNA;ortholog_cluster=OG0001934;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 117504 119523 . + . ID=LTnewLM_200008200:pseudogene;coverage=0.985;sequence_ID=0.900;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.0310_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 117504 119523 . + . ID=LTnewLM_200008200.1;Parent=LTnewLM_200008200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 118885 119523 . + . ID=LTnewLM_200008200.1:pseudogenic_exon:1;Parent=LTnewLM_200008200.1;extra_copy_number=0 LTnewLM_20 . pseudogenic_transcript 119074 119523 . + . ID=LTnewLM_200008200.2;Parent=LTnewLM_200008200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 119269 119523 . + . ID=LTnewLM_200008200.2:pseudogenic_exon:1;Parent=LTnewLM_200008200.2;extra_copy_number=0 ### LTnewLM_20 . polypeptide 118885 119523 . + . ID=LTnewLM_200008200.1:pep;Derives_from=LTnewLM_200008200.1;product=term%3Dhypothetical protein ### LTnewLM_20 . polypeptide 119269 119523 . + . ID=LTnewLM_200008200.2:pep;Derives_from=LTnewLM_200008200.2;orthologous_to=LmjF.20.0310.2_mRNA;ortholog_cluster=OG0007495;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 120289 122388 1 + . ID=LTnewLM_200008300 LTnewLM_20 AUGUSTUS mRNA 120289 122388 1 + . ID=LTnewLM_200008300.1;Parent=LTnewLM_200008300 LTnewLM_20 AUGUSTUS CDS 120289 122388 1 + 0 ID=LTnewLM_200008300.1:CDS:1;Parent=LTnewLM_200008300.1 ### LTnewLM_20 . polypeptide 120289 122388 . + . ID=LTnewLM_200008300.1:pep;Derives_from=LTnewLM_200008300.1;orthologous_to=LmjF.20.0320_mRNA;ortholog_cluster=OG0001935;product=term%3DLeucine Rich repeats (2 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12799 LTnewLM_20 Pfam protein_match 120637 120759 . + . Parent=LTnewLM_200008300.1:pep;Name=PF12799;signature_desc=Leucine Rich repeats (2 copies) ### LTnewLM_20 AUGUSTUS gene 123193 124146 1 + . ID=LTnewLM_200008400 LTnewLM_20 AUGUSTUS mRNA 123193 124146 1 + . ID=LTnewLM_200008400.1;Parent=LTnewLM_200008400 LTnewLM_20 AUGUSTUS CDS 123193 124146 1 + 0 ID=LTnewLM_200008400.1:CDS:1;Parent=LTnewLM_200008400.1 ### LTnewLM_20 . polypeptide 123193 124146 . + . ID=LTnewLM_200008400.1:pep;Derives_from=LTnewLM_200008400.1;orthologous_to=LmjF.20.0330_mRNA;ortholog_cluster=OG0001936;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 125087 126256 1 + . ID=LTnewLM_200008500 LTnewLM_20 AUGUSTUS mRNA 125087 126256 1 + . ID=LTnewLM_200008500.1;Parent=LTnewLM_200008500 LTnewLM_20 AUGUSTUS CDS 125087 126256 1 + 0 ID=LTnewLM_200008500.1:CDS:1;Parent=LTnewLM_200008500.1 ### LTnewLM_20 . polypeptide 125087 126256 . + . ID=LTnewLM_200008500.1:pep;Derives_from=LTnewLM_200008500.1;orthologous_to=LmjF.20.0340_mRNA;ortholog_cluster=OG0001937;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 126472 126867 . + . ID=LTnewLM_200008600:pseudogene;coverage=0.968;sequence_ID=0.801;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.0343_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 126472 126867 . + . ID=LTnewLM_200008600.1;Parent=LTnewLM_200008600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 126472 126867 . + . ID=LTnewLM_200008600.1:pseudogenic_exon:1;Parent=LTnewLM_200008600.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 126472 126867 . + . ID=LTnewLM_200008600.1:pep;Derives_from=LTnewLM_200008600.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 127335 128261 1 + . ID=LTnewLM_200008700 LTnewLM_20 AUGUSTUS mRNA 127335 128261 1 + . ID=LTnewLM_200008700.1;Parent=LTnewLM_200008700 LTnewLM_20 AUGUSTUS CDS 127335 128261 1 + 0 ID=LTnewLM_200008700.1:CDS:1;Parent=LTnewLM_200008700.1 ### LTnewLM_20 . polypeptide 127335 128261 . + . ID=LTnewLM_200008700.1:pep;Derives_from=LTnewLM_200008700.1;orthologous_to=LmjF.20.0346_mRNA;ortholog_cluster=OG0001938;product=term%3DESCO1/2 acetyl-transferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13880 LTnewLM_20 Pfam protein_match 128055 128249 . + . Parent=LTnewLM_200008700.1:pep;Name=PF13880;signature_desc=ESCO1/2 acetyl-transferase ### LTnewLM_20 AUGUSTUS gene 149782 151974 1 + . ID=LTnewLM_200008800 LTnewLM_20 AUGUSTUS mRNA 149782 151974 1 + . ID=LTnewLM_200008800.1;Parent=LTnewLM_200008800 LTnewLM_20 AUGUSTUS CDS 149782 151974 1 + 0 ID=LTnewLM_200008800.1:CDS:1;Parent=LTnewLM_200008800.1 ### LTnewLM_20 . polypeptide 149782 151974 . + . ID=LTnewLM_200008800.1:pep;Derives_from=LTnewLM_200008800.1;orthologous_to=LmjF.20.0350_mRNA;ortholog_cluster=OG0001939;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_20 Pfam protein_match 149842 150402 . + . Parent=LTnewLM_200008800.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_20 AUGUSTUS gene 153340 154263 0.88 + . ID=LTnewLM_200008900 LTnewLM_20 AUGUSTUS mRNA 153340 154263 0.88 + . ID=LTnewLM_200008900.1;Parent=LTnewLM_200008900 LTnewLM_20 AUGUSTUS CDS 153340 154263 0.88 + 0 ID=LTnewLM_200008900.1:CDS:1;Parent=LTnewLM_200008900.1 ### LTnewLM_20 . polypeptide 153340 154263 . + . ID=LTnewLM_200008900.1:pep;Derives_from=LTnewLM_200008900.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 157096 158058 1 + . ID=LTnewLM_200009000 LTnewLM_20 AUGUSTUS mRNA 157096 158058 1 + . ID=LTnewLM_200009000.1;Parent=LTnewLM_200009000 LTnewLM_20 AUGUSTUS CDS 157096 158058 1 + 0 ID=LTnewLM_200009000.1:CDS:1;Parent=LTnewLM_200009000.1 ### LTnewLM_20 . polypeptide 157096 158058 . + . ID=LTnewLM_200009000.1:pep;Derives_from=LTnewLM_200009000.1;orthologous_to=LmjF.20.0360_mRNA;ortholog_cluster=OG0001940;product=term%3DProtein of unknown function (DUF2946)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11162 LTnewLM_20 Pfam protein_match 157126 157347 . + . Parent=LTnewLM_200009000.1:pep;Name=PF11162;signature_desc=Protein of unknown function (DUF2946) ### LTnewLM_20 AUGUSTUS gene 161515 165156 1 + . ID=LTnewLM_200009100 LTnewLM_20 AUGUSTUS mRNA 161515 165156 1 + . ID=LTnewLM_200009100.1;Parent=LTnewLM_200009100 LTnewLM_20 AUGUSTUS CDS 161515 165156 1 + 0 ID=LTnewLM_200009100.1:CDS:1;Parent=LTnewLM_200009100.1 ### LTnewLM_20 . polypeptide 161515 165156 . + . ID=LTnewLM_200009100.1:pep;Derives_from=LTnewLM_200009100.1;orthologous_to=LmjF.20.0370_mRNA;ortholog_cluster=OG0001941;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 167372 171568 1 + . ID=LTnewLM_200009200 LTnewLM_20 AUGUSTUS mRNA 167372 171568 1 + . ID=LTnewLM_200009200.1;Parent=LTnewLM_200009200 LTnewLM_20 AUGUSTUS CDS 167372 171568 1 + 0 ID=LTnewLM_200009200.1:CDS:1;Parent=LTnewLM_200009200.1 ### LTnewLM_20 . polypeptide 167372 171568 . + . ID=LTnewLM_200009200.1:pep;Derives_from=LTnewLM_200009200.1;orthologous_to=LmjF.20.0375_mRNA;ortholog_cluster=OG0001942;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 172350 173591 1 + . ID=LTnewLM_200009300 LTnewLM_20 AUGUSTUS mRNA 172350 173591 1 + . ID=LTnewLM_200009300.1;Parent=LTnewLM_200009300 LTnewLM_20 AUGUSTUS CDS 172350 173591 1 + 0 ID=LTnewLM_200009300.1:CDS:1;Parent=LTnewLM_200009300.1 ### LTnewLM_20 . polypeptide 172350 173591 . + . ID=LTnewLM_200009300.1:pep;Derives_from=LTnewLM_200009300.1;orthologous_to=LmjF.20.0380_mRNA;ortholog_cluster=OG0001943;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 175712 176799 0.5 + . ID=LTnewLM_200009400 LTnewLM_20 AUGUSTUS mRNA 175712 176799 0.5 + . ID=LTnewLM_200009400.1;Parent=LTnewLM_200009400 LTnewLM_20 AUGUSTUS CDS 175712 176638 0.53 + 0 ID=LTnewLM_200009400.1:CDS:1;Parent=LTnewLM_200009400.1 LTnewLM_20 AUGUSTUS CDS 176689 176799 0.51 + 0 ID=LTnewLM_200009400.1:CDS:2;Parent=LTnewLM_200009400.1 ### LTnewLM_20 . polypeptide 175712 176799 . + . ID=LTnewLM_200009400.1:pep;Derives_from=LTnewLM_200009400.1;orthologous_to=LmjF.20.0390_mRNA;ortholog_cluster=OG0001944;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 177625 179331 1 + . ID=LTnewLM_200009500 LTnewLM_20 AUGUSTUS mRNA 177625 179331 1 + . ID=LTnewLM_200009500.1;Parent=LTnewLM_200009500 LTnewLM_20 AUGUSTUS CDS 177625 179331 1 + 0 ID=LTnewLM_200009500.1:CDS:1;Parent=LTnewLM_200009500.1 ### LTnewLM_20 . polypeptide 177625 179331 . + . ID=LTnewLM_200009500.1:pep;Derives_from=LTnewLM_200009500.1;orthologous_to=LmjF.20.0400_mRNA;ortholog_cluster=OG0001945;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 180095 180973 0.64 + . ID=LTnewLM_200009600 LTnewLM_20 AUGUSTUS mRNA 180095 180973 0.64 + . ID=LTnewLM_200009600.1;Parent=LTnewLM_200009600 LTnewLM_20 AUGUSTUS CDS 180095 180973 0.64 + 0 ID=LTnewLM_200009600.1:CDS:1;Parent=LTnewLM_200009600.1 ### LTnewLM_20 . polypeptide 180095 180973 . + . ID=LTnewLM_200009600.1:pep;Derives_from=LTnewLM_200009600.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 181983 186014 0.73 + . ID=LTnewLM_200009700 LTnewLM_20 AUGUSTUS mRNA 181983 186014 0.73 + . ID=LTnewLM_200009700.1;Parent=LTnewLM_200009700 LTnewLM_20 AUGUSTUS CDS 181983 185046 0.74 + 0 ID=LTnewLM_200009700.1:CDS:1;Parent=LTnewLM_200009700.1 LTnewLM_20 AUGUSTUS CDS 185422 186014 0.97 + 2 ID=LTnewLM_200009700.1:CDS:2;Parent=LTnewLM_200009700.1 ### LTnewLM_20 . polypeptide 181983 186014 . + . ID=LTnewLM_200009700.1:pep;Derives_from=LTnewLM_200009700.1;orthologous_to=LmjF.20.0410_mRNA;ortholog_cluster=OG0001946;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 186940 188058 1 + . ID=LTnewLM_200009800 LTnewLM_20 AUGUSTUS mRNA 186940 188058 1 + . ID=LTnewLM_200009800.1;Parent=LTnewLM_200009800 LTnewLM_20 AUGUSTUS CDS 186940 188058 1 + 0 ID=LTnewLM_200009800.1:CDS:1;Parent=LTnewLM_200009800.1 ### LTnewLM_20 . polypeptide 186940 188058 . + . ID=LTnewLM_200009800.1:pep;Derives_from=LTnewLM_200009800.1;orthologous_to=LmjF.20.0420_mRNA;ortholog_cluster=OG0001947;product=term%3DHypothetical methyltransferase/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05148|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_20 Pfam protein_match 187336 188052 . + . Parent=LTnewLM_200009800.1:pep;Name=PF05148;signature_desc=Hypothetical methyltransferase;Ontology_term=GO:0008168 LTnewLM_20 Pfam protein_match 187612 187833 . + . Parent=LTnewLM_200009800.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_20 AUGUSTUS gene 189341 191716 1 + . ID=LTnewLM_200009900 LTnewLM_20 AUGUSTUS mRNA 189341 191716 1 + . ID=LTnewLM_200009900.1;Parent=LTnewLM_200009900 LTnewLM_20 AUGUSTUS CDS 189341 191716 1 + 0 ID=LTnewLM_200009900.1:CDS:1;Parent=LTnewLM_200009900.1 ### LTnewLM_20 . polypeptide 189341 191716 . + . ID=LTnewLM_200009900.1:pep;Derives_from=LTnewLM_200009900.1;orthologous_to=LmjF.20.0430_mRNA;ortholog_cluster=OG0001948;product=term%3DFAD binding domain/FAD dependent oxidoreductase/Glucose inhibited division protein A/NAD(P)-binding Rossmann-like domain/C-terminal domain of alpha-glycerophosphate oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00890|Pfam:PF12831|Pfam:PF01134|Pfam:PF01266|Pfam:PF13450|Pfam:PF16901;Ontology_term=GO:0008033,GO:0016491,GO:0050660,GO:0055114 LTnewLM_20 Pfam protein_match 189563 189679 . + . Parent=LTnewLM_200009900.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_20 Pfam protein_match 189563 189685 . + . Parent=LTnewLM_200009900.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_20 Pfam protein_match 189563 189736 . + . Parent=LTnewLM_200009900.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_20 Pfam protein_match 189563 190759 . + . Parent=LTnewLM_200009900.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_20 Pfam protein_match 189572 189682 . + . Parent=LTnewLM_200009900.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_20 Pfam protein_match 191489 191656 . + . Parent=LTnewLM_200009900.1:pep;Name=PF16901;signature_desc=C-terminal domain of alpha-glycerophosphate oxidase ### LTnewLM_20 AUGUSTUS gene 193206 194669 1 + . ID=LTnewLM_200010000 LTnewLM_20 AUGUSTUS mRNA 193206 194669 1 + . ID=LTnewLM_200010000.1;Parent=LTnewLM_200010000 LTnewLM_20 AUGUSTUS CDS 193206 194669 1 + 0 ID=LTnewLM_200010000.1:CDS:1;Parent=LTnewLM_200010000.1 ### LTnewLM_20 . polypeptide 193206 194669 . + . ID=LTnewLM_200010000.1:pep;Derives_from=LTnewLM_200010000.1;orthologous_to=LmjF.20.0440_mRNA;ortholog_cluster=OG0001949;product=term%3DGamma-glutamyl cyclotransferase%2C AIG2-like/AIG2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06094|Pfam:PF13772 LTnewLM_20 Pfam protein_match 194139 194543 . + . Parent=LTnewLM_200010000.1:pep;Name=PF06094;signature_desc=Gamma-glutamyl cyclotransferase%2C AIG2-like LTnewLM_20 Pfam protein_match 194364 194594 . + . Parent=LTnewLM_200010000.1:pep;Name=PF13772;signature_desc=AIG2-like family ### LTnewLM_20 AUGUSTUS gene 196503 196793 1 + . ID=LTnewLM_200010100 LTnewLM_20 AUGUSTUS mRNA 196503 196793 1 + . ID=LTnewLM_200010100.1;Parent=LTnewLM_200010100 LTnewLM_20 AUGUSTUS CDS 196503 196793 1 + 0 ID=LTnewLM_200010100.1:CDS:1;Parent=LTnewLM_200010100.1 ### LTnewLM_20 . polypeptide 196503 196793 . + . ID=LTnewLM_200010100.1:pep;Derives_from=LTnewLM_200010100.1;orthologous_to=LmjF.20.0450_mRNA;ortholog_cluster=OG0001950;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 199824 200951 1 + . ID=LTnewLM_200010200 LTnewLM_20 AUGUSTUS mRNA 199824 200951 1 + . ID=LTnewLM_200010200.1;Parent=LTnewLM_200010200 LTnewLM_20 AUGUSTUS CDS 199824 200951 1 + 0 ID=LTnewLM_200010200.1:CDS:1;Parent=LTnewLM_200010200.1 ### LTnewLM_20 . polypeptide 199824 200951 . + . ID=LTnewLM_200010200.1:pep;Derives_from=LTnewLM_200010200.1;orthologous_to=LmjF.20.0460_mRNA;ortholog_cluster=OG0001951;product=term%3DTransmembrane protein 231%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10149 LTnewLM_20 Pfam protein_match 199890 200198 . + . Parent=LTnewLM_200010200.1:pep;Name=PF10149;signature_desc=Transmembrane protein 231 LTnewLM_20 Pfam protein_match 200742 200909 . + . Parent=LTnewLM_200010200.1:pep;Name=PF10149;signature_desc=Transmembrane protein 231 ### LTnewLM_20 AUGUSTUS gene 201858 203675 1 + . ID=LTnewLM_200010300 LTnewLM_20 AUGUSTUS mRNA 201858 203675 1 + . ID=LTnewLM_200010300.1;Parent=LTnewLM_200010300 LTnewLM_20 AUGUSTUS CDS 201858 203675 1 + 0 ID=LTnewLM_200010300.1:CDS:1;Parent=LTnewLM_200010300.1 ### LTnewLM_20 . polypeptide 201858 203675 . + . ID=LTnewLM_200010300.1:pep;Derives_from=LTnewLM_200010300.1;orthologous_to=LmjF.20.0470_mRNA;ortholog_cluster=OG0001952;product=term%3DTubulin/FtsZ family%2C GTPase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091;Ontology_term=GO:0003924 LTnewLM_20 Pfam protein_match 201864 202175 . + . Parent=LTnewLM_200010300.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_20 Pfam protein_match 202260 202649 . + . Parent=LTnewLM_200010300.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_20 AUGUSTUS gene 204475 206133 1 + . ID=LTnewLM_200010400 LTnewLM_20 AUGUSTUS mRNA 204475 206133 1 + . ID=LTnewLM_200010400.1;Parent=LTnewLM_200010400 LTnewLM_20 AUGUSTUS CDS 204475 206133 1 + 0 ID=LTnewLM_200010400.1:CDS:1;Parent=LTnewLM_200010400.1 ### LTnewLM_20 . polypeptide 204475 206133 . + . ID=LTnewLM_200010400.1:pep;Derives_from=LTnewLM_200010400.1;orthologous_to=LmjF.20.0480_mRNA;ortholog_cluster=OG0001953;product=term%3DPPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01535 LTnewLM_20 Pfam protein_match 205693 205758 . + . Parent=LTnewLM_200010400.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_20 AUGUSTUS gene 206746 207174 1 + . ID=LTnewLM_200010500 LTnewLM_20 AUGUSTUS mRNA 206746 207174 1 + . ID=LTnewLM_200010500.1;Parent=LTnewLM_200010500 LTnewLM_20 AUGUSTUS CDS 206746 207174 1 + 0 ID=LTnewLM_200010500.1:CDS:1;Parent=LTnewLM_200010500.1 ### LTnewLM_20 . polypeptide 206746 207174 . + . ID=LTnewLM_200010500.1:pep;Derives_from=LTnewLM_200010500.1;orthologous_to=LmjF.20.0490_mRNA;ortholog_cluster=OG0001954;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 208873 210525 1 + . ID=LTnewLM_200010600 LTnewLM_20 AUGUSTUS mRNA 208873 210525 1 + . ID=LTnewLM_200010600.1;Parent=LTnewLM_200010600 LTnewLM_20 AUGUSTUS CDS 208873 210525 1 + 0 ID=LTnewLM_200010600.1:CDS:1;Parent=LTnewLM_200010600.1 ### LTnewLM_20 . polypeptide 208873 210525 . + . ID=LTnewLM_200010600.1:pep;Derives_from=LTnewLM_200010600.1;orthologous_to=LmjF.20.0500_mRNA;ortholog_cluster=OG0001955;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 211909 213198 1 + . ID=LTnewLM_200010700 LTnewLM_20 AUGUSTUS mRNA 211909 213198 1 + . ID=LTnewLM_200010700.1;Parent=LTnewLM_200010700 LTnewLM_20 AUGUSTUS CDS 211909 213198 1 + 0 ID=LTnewLM_200010700.1:CDS:1;Parent=LTnewLM_200010700.1 ### LTnewLM_20 . polypeptide 211909 213198 . + . ID=LTnewLM_200010700.1:pep;Derives_from=LTnewLM_200010700.1;orthologous_to=LmjF.20.0510_mRNA;ortholog_cluster=OG0001956;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 214261 217149 1 + . ID=LTnewLM_200010800 LTnewLM_20 AUGUSTUS mRNA 214261 217149 1 + . ID=LTnewLM_200010800.1;Parent=LTnewLM_200010800 LTnewLM_20 AUGUSTUS CDS 214261 217149 1 + 0 ID=LTnewLM_200010800.1:CDS:1;Parent=LTnewLM_200010800.1 ### LTnewLM_20 . polypeptide 214261 217149 . + . ID=LTnewLM_200010800.1:pep;Derives_from=LTnewLM_200010800.1;orthologous_to=LmjF.20.0520_mRNA;ortholog_cluster=OG0001957;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_20 Pfam protein_match 216250 216303 . + . Parent=LTnewLM_200010800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 216880 216945 . + . Parent=LTnewLM_200010800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 216949 217008 . + . Parent=LTnewLM_200010800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 217021 217086 . + . Parent=LTnewLM_200010800.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_20 AUGUSTUS gene 217976 218410 1 + . ID=LTnewLM_200010900 LTnewLM_20 AUGUSTUS mRNA 217976 218410 1 + . ID=LTnewLM_200010900.1;Parent=LTnewLM_200010900 LTnewLM_20 AUGUSTUS CDS 217976 218410 1 + 0 ID=LTnewLM_200010900.1:CDS:1;Parent=LTnewLM_200010900.1 ### LTnewLM_20 . polypeptide 217976 218410 . + . ID=LTnewLM_200010900.1:pep;Derives_from=LTnewLM_200010900.1;orthologous_to=LmjF.20.0530_mRNA;ortholog_cluster=OG0001958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 219383 220081 1 + . ID=LTnewLM_200011000 LTnewLM_20 AUGUSTUS mRNA 219383 220081 1 + . ID=LTnewLM_200011000.1;Parent=LTnewLM_200011000 LTnewLM_20 AUGUSTUS CDS 219383 220081 1 + 0 ID=LTnewLM_200011000.1:CDS:1;Parent=LTnewLM_200011000.1 ### LTnewLM_20 . polypeptide 219383 220081 . + . ID=LTnewLM_200011000.1:pep;Derives_from=LTnewLM_200011000.1;orthologous_to=LmjF.20.0540_mRNA;ortholog_cluster=OG0001959;product=term%3DRWD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05773;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 219398 219706 . + . Parent=LTnewLM_200011000.1:pep;Name=PF05773;signature_desc=RWD domain;Ontology_term=GO:0005515 ### LTnewLM_20 AUGUSTUS gene 221112 222749 1 + . ID=LTnewLM_200011100 LTnewLM_20 AUGUSTUS mRNA 221112 222749 1 + . ID=LTnewLM_200011100.1;Parent=LTnewLM_200011100 LTnewLM_20 AUGUSTUS CDS 221112 222749 1 + 0 ID=LTnewLM_200011100.1:CDS:1;Parent=LTnewLM_200011100.1 ### LTnewLM_20 . polypeptide 221112 222749 . + . ID=LTnewLM_200011100.1:pep;Derives_from=LTnewLM_200011100.1;orthologous_to=LmjF.20.0550_mRNA;ortholog_cluster=OG0001960;product=term%3DDnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_20 Pfam protein_match 221841 222440 . + . Parent=LTnewLM_200011100.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_20 Pfam protein_match 221919 222098 . + . Parent=LTnewLM_200011100.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 ### LTnewLM_20 AUGUSTUS gene 224013 225815 1 + . ID=LTnewLM_200011200 LTnewLM_20 AUGUSTUS mRNA 224013 225815 1 + . ID=LTnewLM_200011200.1;Parent=LTnewLM_200011200 LTnewLM_20 AUGUSTUS CDS 224013 225815 1 + 0 ID=LTnewLM_200011200.1:CDS:1;Parent=LTnewLM_200011200.1 ### LTnewLM_20 . polypeptide 224013 225815 . + . ID=LTnewLM_200011200.1:pep;Derives_from=LTnewLM_200011200.1;orthologous_to=LmjF.20.0560_mRNA;ortholog_cluster=OG0001961;product=term%3DCTP synthase N-terminus/Glutamine amidotransferase class-I/Peptidase C26%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06418|Pfam:PF00117|Pfam:PF07722;Ontology_term=GO:0003883,GO:0006541,GO:0016787,GO:0006221 LTnewLM_20 Pfam protein_match 224100 224903 . + . Parent=LTnewLM_200011200.1:pep;Name=PF06418;signature_desc=CTP synthase N-terminus;Ontology_term=GO:0003883,GO:0006221 LTnewLM_20 Pfam protein_match 225036 225719 . + . Parent=LTnewLM_200011200.1:pep;Name=PF00117;signature_desc=Glutamine amidotransferase class-I LTnewLM_20 Pfam protein_match 225234 225671 . + . Parent=LTnewLM_200011200.1:pep;Name=PF07722;signature_desc=Peptidase C26;Ontology_term=GO:0016787,GO:0006541 ### LTnewLM_20 . pseudogene 228207 229832 2.54e+03 + . ID=LTnewLM_200011300:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.20.0570:mRNA 1 546;original_prot_length=547 LTnewLM_20 . pseudogenic_transcript 228207 229832 . + . ID=LTnewLM_200011300.1;Parent=LTnewLM_200011300:pseudogene LTnewLM_20 . pseudogenic_exon 228207 229832 . + . ID=LTnewLM_200011300.1:pseudogenic_exon:1;Parent=LTnewLM_200011300.1 ### LTnewLM_20 . polypeptide 228207 229832 . + . ID=LTnewLM_200011300.1:pep;Derives_from=LTnewLM_200011300.1;orthologous_to=LmjF.20.0570_mRNA;ortholog_cluster=OG0007496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 232481 233776 1 + . ID=LTnewLM_200011400 LTnewLM_20 AUGUSTUS mRNA 232481 233776 1 + . ID=LTnewLM_200011400.1;Parent=LTnewLM_200011400 LTnewLM_20 AUGUSTUS CDS 232481 233776 1 + 0 ID=LTnewLM_200011400.1:CDS:1;Parent=LTnewLM_200011400.1 ### LTnewLM_20 . polypeptide 232481 233776 . + . ID=LTnewLM_200011400.1:pep;Derives_from=LTnewLM_200011400.1;orthologous_to=LmjF.20.0580_mRNA;ortholog_cluster=OG0001962;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_20 Pfam protein_match 232964 233008 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 233012 233077 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 233081 233143 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 233150 233194 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 233219 233281 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 233288 233332 . + . Parent=LTnewLM_200011400.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_20 AUGUSTUS gene 236819 237085 0.91 + . ID=LTnewLM_200011500 LTnewLM_20 AUGUSTUS mRNA 236819 237085 0.91 + . ID=LTnewLM_200011500.1;Parent=LTnewLM_200011500 LTnewLM_20 AUGUSTUS CDS 236819 237085 0.91 + 0 ID=LTnewLM_200011500.1:CDS:1;Parent=LTnewLM_200011500.1 ### LTnewLM_20 . polypeptide 236819 237085 . + . ID=LTnewLM_200011500.1:pep;Derives_from=LTnewLM_200011500.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 238110 239957 1 + . ID=LTnewLM_200011600 LTnewLM_20 AUGUSTUS mRNA 238110 239957 1 + . ID=LTnewLM_200011600.1;Parent=LTnewLM_200011600 LTnewLM_20 AUGUSTUS CDS 238110 239957 1 + 0 ID=LTnewLM_200011600.1:CDS:1;Parent=LTnewLM_200011600.1 ### LTnewLM_20 . polypeptide 238110 239957 . + . ID=LTnewLM_200011600.1:pep;Derives_from=LTnewLM_200011600.1;orthologous_to=LmjF.20.0590_mRNA;ortholog_cluster=OG0001963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 240957 242177 1 + . ID=LTnewLM_200011700 LTnewLM_20 AUGUSTUS mRNA 240957 242177 1 + . ID=LTnewLM_200011700.1;Parent=LTnewLM_200011700 LTnewLM_20 AUGUSTUS CDS 240957 242177 1 + 0 ID=LTnewLM_200011700.1:CDS:1;Parent=LTnewLM_200011700.1 ### LTnewLM_20 . polypeptide 240957 242177 . + . ID=LTnewLM_200011700.1:pep;Derives_from=LTnewLM_200011700.1;orthologous_to=LmjF.20.0600_mRNA;ortholog_cluster=OG0001964;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 Liftoff gene 243296 248146 . + . ID=LTnewLM_200011800;coverage=0.999;sequence_ID=0.912;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.0620_0 LTnewLM_20 Liftoff mRNA 243296 248146 . + . ID=LTnewLM_200011800.1;Parent=LTnewLM_200011800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 Liftoff CDS 243296 248146 . + 0 ID=LTnewLM_200011800.1:CDS:1;Parent=LTnewLM_200011800.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 243296 248146 . + . ID=LTnewLM_200011800.1:pep;Derives_from=LTnewLM_200011800.1;orthologous_to=LmjF.20.0620_mRNA;ortholog_cluster=OG0001965;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 249811 253470 1 + . ID=LTnewLM_200011900 LTnewLM_20 AUGUSTUS mRNA 249811 253470 1 + . ID=LTnewLM_200011900.1;Parent=LTnewLM_200011900 LTnewLM_20 AUGUSTUS CDS 249811 253470 1 + 0 ID=LTnewLM_200011900.1:CDS:1;Parent=LTnewLM_200011900.1 ### LTnewLM_20 . polypeptide 249811 253470 . + . ID=LTnewLM_200011900.1:pep;Derives_from=LTnewLM_200011900.1;orthologous_to=LmjF.20.0630_mRNA;ortholog_cluster=OG0001966;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 255287 258811 1 + . ID=LTnewLM_200012000 LTnewLM_20 AUGUSTUS mRNA 255287 258811 1 + . ID=LTnewLM_200012000.1;Parent=LTnewLM_200012000 LTnewLM_20 AUGUSTUS CDS 255287 258811 1 + 0 ID=LTnewLM_200012000.1:CDS:1;Parent=LTnewLM_200012000.1 ### LTnewLM_20 . polypeptide 255287 258811 . + . ID=LTnewLM_200012000.1:pep;Derives_from=LTnewLM_200012000.1;orthologous_to=LmjF.20.0640_mRNA;ortholog_cluster=OG0001967;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_20 Pfam protein_match 255314 255706 . + . Parent=LTnewLM_200012000.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_20 Pfam protein_match 255332 255697 . + . Parent=LTnewLM_200012000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_20 Pfam protein_match 256373 257101 . + . Parent=LTnewLM_200012000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_20 AUGUSTUS gene 260004 262217 1 + . ID=LTnewLM_200012100 LTnewLM_20 AUGUSTUS mRNA 260004 262217 1 + . ID=LTnewLM_200012100.1;Parent=LTnewLM_200012100 LTnewLM_20 AUGUSTUS CDS 260004 262217 1 + 0 ID=LTnewLM_200012100.1:CDS:1;Parent=LTnewLM_200012100.1 ### LTnewLM_20 . polypeptide 260004 262217 . + . ID=LTnewLM_200012100.1:pep;Derives_from=LTnewLM_200012100.1;orthologous_to=LmjF.20.0650_mRNA;ortholog_cluster=OG0001968;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 263468 265267 1 + . ID=LTnewLM_200012200 LTnewLM_20 AUGUSTUS mRNA 263468 265267 1 + . ID=LTnewLM_200012200.1;Parent=LTnewLM_200012200 LTnewLM_20 AUGUSTUS CDS 263468 265267 1 + 0 ID=LTnewLM_200012200.1:CDS:1;Parent=LTnewLM_200012200.1 ### LTnewLM_20 . polypeptide 263468 265267 . + . ID=LTnewLM_200012200.1:pep;Derives_from=LTnewLM_200012200.1;orthologous_to=LmjF.20.0660_mRNA;ortholog_cluster=OG0001969;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 266423 267169 1 + . ID=LTnewLM_200012300 LTnewLM_20 AUGUSTUS mRNA 266423 267169 1 + . ID=LTnewLM_200012300.1;Parent=LTnewLM_200012300 LTnewLM_20 AUGUSTUS CDS 266423 267169 1 + 0 ID=LTnewLM_200012300.1:CDS:1;Parent=LTnewLM_200012300.1 ### LTnewLM_20 . polypeptide 266423 267169 . + . ID=LTnewLM_200012300.1:pep;Derives_from=LTnewLM_200012300.1;orthologous_to=LmjF.20.0670_mRNA;ortholog_cluster=OG0001970;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 268684 269331 1 + . ID=LTnewLM_200012400 LTnewLM_20 AUGUSTUS mRNA 268684 269331 1 + . ID=LTnewLM_200012400.1;Parent=LTnewLM_200012400 LTnewLM_20 AUGUSTUS CDS 268684 269331 1 + 0 ID=LTnewLM_200012400.1:CDS:1;Parent=LTnewLM_200012400.1 ### LTnewLM_20 . polypeptide 268684 269331 . + . ID=LTnewLM_200012400.1:pep;Derives_from=LTnewLM_200012400.1;orthologous_to=LmjF.20.0680_mRNA;ortholog_cluster=OG0001971;product=term%3DProtein of unknown function (DUF775)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05603 LTnewLM_20 Pfam protein_match 268756 269322 . + . Parent=LTnewLM_200012400.1:pep;Name=PF05603;signature_desc=Protein of unknown function (DUF775) ### LTnewLM_20 AUGUSTUS gene 273855 277852 0.76 + . ID=LTnewLM_200012500 LTnewLM_20 AUGUSTUS mRNA 273855 277852 0.76 + . ID=LTnewLM_200012500.1;Parent=LTnewLM_200012500 LTnewLM_20 AUGUSTUS CDS 273855 277403 0.92 + 0 ID=LTnewLM_200012500.1:CDS:1;Parent=LTnewLM_200012500.1 LTnewLM_20 AUGUSTUS CDS 277475 277852 0.8 + 0 ID=LTnewLM_200012500.1:CDS:2;Parent=LTnewLM_200012500.1 ### LTnewLM_20 . polypeptide 273855 277852 . + . ID=LTnewLM_200012500.1:pep;Derives_from=LTnewLM_200012500.1;orthologous_to=LmjF.20.0690_mRNA;ortholog_cluster=OG0001972;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 293470 296678 0.78 + . ID=LTnewLM_200012600 LTnewLM_20 AUGUSTUS mRNA 293470 296678 0.78 + . ID=LTnewLM_200012600.1;Parent=LTnewLM_200012600 LTnewLM_20 AUGUSTUS CDS 293470 296159 0.78 + 0 ID=LTnewLM_200012600.1:CDS:1;Parent=LTnewLM_200012600.1 LTnewLM_20 AUGUSTUS CDS 296213 296678 0.78 + 1 ID=LTnewLM_200012600.1:CDS:2;Parent=LTnewLM_200012600.1 ### LTnewLM_20 . polypeptide 293470 296678 . + . ID=LTnewLM_200012600.1:pep;Derives_from=LTnewLM_200012600.1;orthologous_to=LmjF.20.0700_mRNA;ortholog_cluster=OG0001973;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 301009 301314 1 + . ID=LTnewLM_200012700 LTnewLM_20 AUGUSTUS mRNA 301009 301314 1 + . ID=LTnewLM_200012700.1;Parent=LTnewLM_200012700 LTnewLM_20 AUGUSTUS CDS 301009 301314 1 + 0 ID=LTnewLM_200012700.1:CDS:1;Parent=LTnewLM_200012700.1 ### LTnewLM_20 . polypeptide 301009 301314 . + . ID=LTnewLM_200012700.1:pep;Derives_from=LTnewLM_200012700.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 310554 315483 0.98 + . ID=LTnewLM_200012800 LTnewLM_20 AUGUSTUS mRNA 310554 315483 0.98 + . ID=LTnewLM_200012800.1;Parent=LTnewLM_200012800 LTnewLM_20 AUGUSTUS CDS 310554 315357 0.98 + 0 ID=LTnewLM_200012800.1:CDS:1;Parent=LTnewLM_200012800.1 LTnewLM_20 AUGUSTUS CDS 315401 315483 0.98 + 2 ID=LTnewLM_200012800.1:CDS:2;Parent=LTnewLM_200012800.1 ### LTnewLM_20 . polypeptide 310554 315483 . + . ID=LTnewLM_200012800.1:pep;Derives_from=LTnewLM_200012800.1;orthologous_to=LmjF.20.0705_mRNA;ortholog_cluster=OG0001974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 318830 319084 1 + . ID=LTnewLM_200012900 LTnewLM_20 AUGUSTUS mRNA 318830 319084 1 + . ID=LTnewLM_200012900.1;Parent=LTnewLM_200012900 LTnewLM_20 AUGUSTUS CDS 318830 319084 1 + 0 ID=LTnewLM_200012900.1:CDS:1;Parent=LTnewLM_200012900.1 ### LTnewLM_20 . polypeptide 318830 319084 . + . ID=LTnewLM_200012900.1:pep;Derives_from=LTnewLM_200012900.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 321057 321323 1 + . ID=LTnewLM_200013000 LTnewLM_20 AUGUSTUS mRNA 321057 321323 1 + . ID=LTnewLM_200013000.1;Parent=LTnewLM_200013000 LTnewLM_20 AUGUSTUS CDS 321057 321323 1 + 0 ID=LTnewLM_200013000.1:CDS:1;Parent=LTnewLM_200013000.1 ### LTnewLM_20 . polypeptide 321057 321323 . + . ID=LTnewLM_200013000.1:pep;Derives_from=LTnewLM_200013000.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 325792 337837 0.89 + . ID=LTnewLM_200013100 LTnewLM_20 AUGUSTUS mRNA 325792 337837 0.89 + . ID=LTnewLM_200013100.1;Parent=LTnewLM_200013100 LTnewLM_20 AUGUSTUS CDS 325792 327805 0.92 + 0 ID=LTnewLM_200013100.1:CDS:1;Parent=LTnewLM_200013100.1 LTnewLM_20 AUGUSTUS CDS 327921 337837 0.95 + 2 ID=LTnewLM_200013100.1:CDS:2;Parent=LTnewLM_200013100.1 ### LTnewLM_20 . polypeptide 325792 337837 . + . ID=LTnewLM_200013100.1:pep;Derives_from=LTnewLM_200013100.1;orthologous_to=LmjF.20.0770_mRNA;ortholog_cluster=OG0001975;product=term%3DCyclic nucleotide-binding domain/PAS fold/Protein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027|Pfam:PF00989|Pfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468,GO:0006355 LTnewLM_20 Pfam protein_match 331723 331968 . + . Parent=LTnewLM_200013100.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_20 Pfam protein_match 334156 334389 . + . Parent=LTnewLM_200013100.1:pep;Name=PF00989;signature_desc=PAS fold;Ontology_term=GO:0006355 LTnewLM_20 Pfam protein_match 336490 337263 . + . Parent=LTnewLM_200013100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_20 Pfam protein_match 336493 337263 . + . Parent=LTnewLM_200013100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_20 Aragorn_1.2.36 gene 327750 327823 . - . ID=LTnewLM_200013200 LTnewLM_20 Aragorn_1.2.36 tRNA 327750 327823 . - . ID=LTnewLM_200013200:tRNA;Parent=LTnewLM_200013200;aa=Ser;anticodon=gct;gc_content=59.5 ### LTnewLM_20 AUGUSTUS gene 339174 341213 1 + . ID=LTnewLM_200013300 LTnewLM_20 AUGUSTUS mRNA 339174 341213 1 + . ID=LTnewLM_200013300.1;Parent=LTnewLM_200013300 LTnewLM_20 AUGUSTUS CDS 339174 341213 1 + 0 ID=LTnewLM_200013300.1:CDS:1;Parent=LTnewLM_200013300.1 ### LTnewLM_20 . polypeptide 339174 341213 . + . ID=LTnewLM_200013300.1:pep;Derives_from=LTnewLM_200013300.1;orthologous_to=LmjF.20.0780_mRNA;ortholog_cluster=OG0001976;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 341851 344160 1 + . ID=LTnewLM_200013400 LTnewLM_20 AUGUSTUS mRNA 341851 344160 1 + . ID=LTnewLM_200013400.1;Parent=LTnewLM_200013400 LTnewLM_20 AUGUSTUS CDS 341851 344160 1 + 0 ID=LTnewLM_200013400.1:CDS:1;Parent=LTnewLM_200013400.1 ### LTnewLM_20 . polypeptide 341851 344160 . + . ID=LTnewLM_200013400.1:pep;Derives_from=LTnewLM_200013400.1;orthologous_to=LmjF.20.0790_mRNA;ortholog_cluster=OG0001977;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_20 Pfam protein_match 342532 343860 . + . Parent=LTnewLM_200013400.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_20 AUGUSTUS gene 344729 345800 1 + . ID=LTnewLM_200013500 LTnewLM_20 AUGUSTUS mRNA 344729 345800 1 + . ID=LTnewLM_200013500.1;Parent=LTnewLM_200013500 LTnewLM_20 AUGUSTUS CDS 344729 344738 1 + 0 ID=LTnewLM_200013500.1:CDS:1;Parent=LTnewLM_200013500.1 LTnewLM_20 AUGUSTUS CDS 344842 345800 1 + 2 ID=LTnewLM_200013500.1:CDS:2;Parent=LTnewLM_200013500.1 ### LTnewLM_20 . polypeptide 344729 345800 . + . ID=LTnewLM_200013500.1:pep;Derives_from=LTnewLM_200013500.1;orthologous_to=LmjF.20.0800_mRNA;ortholog_cluster=OG0001978;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 349154 351370 1 + . ID=LTnewLM_200013600 LTnewLM_20 AUGUSTUS mRNA 349154 351370 1 + . ID=LTnewLM_200013600.1;Parent=LTnewLM_200013600 LTnewLM_20 AUGUSTUS CDS 349154 351370 1 + 0 ID=LTnewLM_200013600.1:CDS:1;Parent=LTnewLM_200013600.1 ### LTnewLM_20 . polypeptide 349154 351370 . + . ID=LTnewLM_200013600.1:pep;Derives_from=LTnewLM_200013600.1;orthologous_to=LmjF.20.0810_mRNA;ortholog_cluster=OG0001979;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862;Ontology_term=GO:0005524 LTnewLM_20 Pfam protein_match 349916 350335 . + . Parent=LTnewLM_200013600.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_20 Pfam protein_match 350417 350521 . + . Parent=LTnewLM_200013600.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_20 Pfam protein_match 350759 351112 . + . Parent=LTnewLM_200013600.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_20 AUGUSTUS gene 352537 353529 1 + . ID=LTnewLM_200013700 LTnewLM_20 AUGUSTUS mRNA 352537 353529 1 + . ID=LTnewLM_200013700.1;Parent=LTnewLM_200013700 LTnewLM_20 AUGUSTUS CDS 352537 353529 1 + 0 ID=LTnewLM_200013700.1:CDS:1;Parent=LTnewLM_200013700.1 ### LTnewLM_20 . polypeptide 352537 353529 . + . ID=LTnewLM_200013700.1:pep;Derives_from=LTnewLM_200013700.1;orthologous_to=LmjF.20.0820_mRNA;ortholog_cluster=OG0001980;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 354361 355182 1 + . ID=LTnewLM_200013800 LTnewLM_20 AUGUSTUS mRNA 354361 355182 1 + . ID=LTnewLM_200013800.1;Parent=LTnewLM_200013800 LTnewLM_20 AUGUSTUS CDS 354361 355182 1 + 0 ID=LTnewLM_200013800.1:CDS:1;Parent=LTnewLM_200013800.1 ### LTnewLM_20 . polypeptide 354361 355182 . + . ID=LTnewLM_200013800.1:pep;Derives_from=LTnewLM_200013800.1;orthologous_to=LmjF.20.0830_mRNA;ortholog_cluster=OG0001981;product=term%3D4'-phosphopantetheinyl transferase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01648;Ontology_term=GO:0008897,GO:0000287 LTnewLM_20 Pfam protein_match 354733 354993 . + . Parent=LTnewLM_200013800.1:pep;Name=PF01648;signature_desc=4'-phosphopantetheinyl transferase superfamily;Ontology_term=GO:0000287,GO:0008897 ### LTnewLM_20 AUGUSTUS gene 355595 356446 1 + . ID=LTnewLM_200013900 LTnewLM_20 AUGUSTUS mRNA 355595 356446 1 + . ID=LTnewLM_200013900.1;Parent=LTnewLM_200013900 LTnewLM_20 AUGUSTUS CDS 355595 356446 1 + 0 ID=LTnewLM_200013900.1:CDS:1;Parent=LTnewLM_200013900.1 ### LTnewLM_20 . polypeptide 355595 356446 . + . ID=LTnewLM_200013900.1:pep;Derives_from=LTnewLM_200013900.1;orthologous_to=LmjF.20.0840_mRNA;ortholog_cluster=OG0001982;product=term%3DSCO1/SenC%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02630 LTnewLM_20 Pfam protein_match 355850 356329 . + . Parent=LTnewLM_200013900.1:pep;Name=PF02630;signature_desc=SCO1/SenC ### LTnewLM_20 AUGUSTUS gene 357157 361881 1 + . ID=LTnewLM_200014000 LTnewLM_20 AUGUSTUS mRNA 357157 361881 1 + . ID=LTnewLM_200014000.1;Parent=LTnewLM_200014000 LTnewLM_20 AUGUSTUS CDS 357157 361881 1 + 0 ID=LTnewLM_200014000.1:CDS:1;Parent=LTnewLM_200014000.1 ### LTnewLM_20 . polypeptide 357157 361881 . + . ID=LTnewLM_200014000.1:pep;Derives_from=LTnewLM_200014000.1;orthologous_to=LmjF.20.0850_mRNA;ortholog_cluster=OG0001983;product=term%3DtRNA pseudouridine synthase D (TruD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01142;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_20 Pfam protein_match 359617 359880 . + . Parent=LTnewLM_200014000.1:pep;Name=PF01142;signature_desc=tRNA pseudouridine synthase D (TruD);Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_20 AUGUSTUS gene 363083 364123 1 + . ID=LTnewLM_200014100 LTnewLM_20 AUGUSTUS mRNA 363083 364123 1 + . ID=LTnewLM_200014100.1;Parent=LTnewLM_200014100 LTnewLM_20 AUGUSTUS CDS 363083 364123 1 + 0 ID=LTnewLM_200014100.1:CDS:1;Parent=LTnewLM_200014100.1 ### LTnewLM_20 . polypeptide 363083 364123 . + . ID=LTnewLM_200014100.1:pep;Derives_from=LTnewLM_200014100.1;orthologous_to=LmjF.20.0860_mRNA;ortholog_cluster=OG0001984;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 365159 367465 1 + . ID=LTnewLM_200014200 LTnewLM_20 AUGUSTUS mRNA 365159 367465 1 + . ID=LTnewLM_200014200.1;Parent=LTnewLM_200014200 LTnewLM_20 AUGUSTUS CDS 365159 367465 1 + 0 ID=LTnewLM_200014200.1:CDS:1;Parent=LTnewLM_200014200.1 ### LTnewLM_20 . polypeptide 365159 367465 . + . ID=LTnewLM_200014200.1:pep;Derives_from=LTnewLM_200014200.1;orthologous_to=LmjF.20.0870_mRNA;ortholog_cluster=OG0001985;product=term%3DType III restriction enzyme%2C res subunit/DEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524,GO:0016787,GO:0003677 LTnewLM_20 Pfam protein_match 365246 365554 . + . Parent=LTnewLM_200014200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_20 Pfam protein_match 365252 365521 . + . Parent=LTnewLM_200014200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_20 Pfam protein_match 365765 366187 . + . Parent=LTnewLM_200014200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_20 Pfam protein_match 366623 366934 . + . Parent=LTnewLM_200014200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_20 AUGUSTUS gene 368456 369118 1 + . ID=LTnewLM_200014300 LTnewLM_20 AUGUSTUS mRNA 368456 369118 1 + . ID=LTnewLM_200014300.1;Parent=LTnewLM_200014300 LTnewLM_20 AUGUSTUS CDS 368456 369118 1 + 0 ID=LTnewLM_200014300.1:CDS:1;Parent=LTnewLM_200014300.1 ### LTnewLM_20 . polypeptide 368456 369118 . + . ID=LTnewLM_200014300.1:pep;Derives_from=LTnewLM_200014300.1;orthologous_to=LmjF.20.0880_mRNA;ortholog_cluster=OG0001986;product=term%3DTranscription elongation factor Elf1 like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05129 LTnewLM_20 Pfam protein_match 368462 368695 . + . Parent=LTnewLM_200014300.1:pep;Name=PF05129;signature_desc=Transcription elongation factor Elf1 like ### LTnewLM_20 AUGUSTUS gene 370092 370970 1 + . ID=LTnewLM_200014400 LTnewLM_20 AUGUSTUS mRNA 370092 370970 1 + . ID=LTnewLM_200014400.1;Parent=LTnewLM_200014400 LTnewLM_20 AUGUSTUS CDS 370092 370970 1 + 0 ID=LTnewLM_200014400.1:CDS:1;Parent=LTnewLM_200014400.1 ### LTnewLM_20 . polypeptide 370092 370970 . + . ID=LTnewLM_200014400.1:pep;Derives_from=LTnewLM_200014400.1;orthologous_to=LmjF.20.0890_mRNA;ortholog_cluster=OG0001987;product=term%3DTranscription elongation factor Elf1 like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05129 LTnewLM_20 Pfam protein_match 370260 370466 . + . Parent=LTnewLM_200014400.1:pep;Name=PF05129;signature_desc=Transcription elongation factor Elf1 like ### LTnewLM_20 AUGUSTUS gene 371798 374932 0.97 + . ID=LTnewLM_200014500 LTnewLM_20 AUGUSTUS mRNA 371798 374932 0.97 + . ID=LTnewLM_200014500.1;Parent=LTnewLM_200014500 LTnewLM_20 AUGUSTUS CDS 371798 374932 0.97 + 0 ID=LTnewLM_200014500.1:CDS:1;Parent=LTnewLM_200014500.1 ### LTnewLM_20 . polypeptide 371798 374932 . + . ID=LTnewLM_200014500.1:pep;Derives_from=LTnewLM_200014500.1;orthologous_to=LmjF.20.0900_mRNA;ortholog_cluster=OG0001988;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 375888 376736 1 + . ID=LTnewLM_200014600 LTnewLM_20 AUGUSTUS mRNA 375888 376736 1 + . ID=LTnewLM_200014600.1;Parent=LTnewLM_200014600 LTnewLM_20 AUGUSTUS CDS 375888 376736 1 + 0 ID=LTnewLM_200014600.1:CDS:1;Parent=LTnewLM_200014600.1 ### LTnewLM_20 . polypeptide 375888 376736 . + . ID=LTnewLM_200014600.1:pep;Derives_from=LTnewLM_200014600.1;orthologous_to=LmjF.20.0910_mRNA;ortholog_cluster=OG0001989;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 377765 379570 1 + . ID=LTnewLM_200014700 LTnewLM_20 AUGUSTUS mRNA 377765 379570 1 + . ID=LTnewLM_200014700.1;Parent=LTnewLM_200014700 LTnewLM_20 AUGUSTUS CDS 377765 379570 1 + 0 ID=LTnewLM_200014700.1:CDS:1;Parent=LTnewLM_200014700.1 ### LTnewLM_20 . polypeptide 377765 379570 . + . ID=LTnewLM_200014700.1:pep;Derives_from=LTnewLM_200014700.1;orthologous_to=LmjF.20.0920_mRNA;ortholog_cluster=OG0001990;product=term%3DApoptosis antagonizing transcription factor/Apoptosis-antagonizing transcription factor%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13339|Pfam:PF08164;Ontology_term=GO:0005634 LTnewLM_20 Pfam protein_match 378641 379087 . + . Parent=LTnewLM_200014700.1:pep;Name=PF13339;signature_desc=Apoptosis antagonizing transcription factor LTnewLM_20 Pfam protein_match 379331 379555 . + . Parent=LTnewLM_200014700.1:pep;Name=PF08164;signature_desc=Apoptosis-antagonizing transcription factor%2C C-terminal;Ontology_term=GO:0005634 ### LTnewLM_20 AUGUSTUS gene 380684 386952 0.43 + . ID=LTnewLM_200014800 LTnewLM_20 AUGUSTUS mRNA 380684 386952 0.43 + . ID=LTnewLM_200014800.1;Parent=LTnewLM_200014800 LTnewLM_20 AUGUSTUS CDS 380684 386073 0.98 + 0 ID=LTnewLM_200014800.1:CDS:1;Parent=LTnewLM_200014800.1 LTnewLM_20 AUGUSTUS CDS 386163 386952 0.45 + 1 ID=LTnewLM_200014800.1:CDS:2;Parent=LTnewLM_200014800.1 ### LTnewLM_20 . polypeptide 380684 386952 . + . ID=LTnewLM_200014800.1:pep;Derives_from=LTnewLM_200014800.1;orthologous_to=LmjF.20.0930_mRNA;ortholog_cluster=OG0001991;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 387517 388812 1 + . ID=LTnewLM_200014900 LTnewLM_20 AUGUSTUS mRNA 387517 388812 1 + . ID=LTnewLM_200014900.1;Parent=LTnewLM_200014900 LTnewLM_20 AUGUSTUS CDS 387517 388812 1 + 0 ID=LTnewLM_200014900.1:CDS:1;Parent=LTnewLM_200014900.1 ### LTnewLM_20 . polypeptide 387517 388812 . + . ID=LTnewLM_200014900.1:pep;Derives_from=LTnewLM_200014900.1;orthologous_to=LmjF.20.0940_mRNA;ortholog_cluster=OG0001992;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 390035 392206 1 + . ID=LTnewLM_200015000 LTnewLM_20 AUGUSTUS mRNA 390035 392206 1 + . ID=LTnewLM_200015000.1;Parent=LTnewLM_200015000 LTnewLM_20 AUGUSTUS CDS 390035 392206 1 + 0 ID=LTnewLM_200015000.1:CDS:1;Parent=LTnewLM_200015000.1 ### LTnewLM_20 . polypeptide 390035 392206 . + . ID=LTnewLM_200015000.1:pep;Derives_from=LTnewLM_200015000.1;orthologous_to=LmjF.20.0950_mRNA;ortholog_cluster=OG0001993;product=term%3DProbable Zinc-ribbon domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311 LTnewLM_20 Pfam protein_match 390251 390418 . + . Parent=LTnewLM_200015000.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain ### LTnewLM_20 AUGUSTUS gene 396429 407069 1 + . ID=LTnewLM_200015100 LTnewLM_20 AUGUSTUS mRNA 396429 407069 1 + . ID=LTnewLM_200015100.1;Parent=LTnewLM_200015100 LTnewLM_20 AUGUSTUS CDS 396429 407069 1 + 0 ID=LTnewLM_200015100.1:CDS:1;Parent=LTnewLM_200015100.1 ### LTnewLM_20 . polypeptide 396429 407069 . + . ID=LTnewLM_200015100.1:pep;Derives_from=LTnewLM_200015100.1;orthologous_to=LmjF.20.0960_mRNA;ortholog_cluster=OG0001994;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_20 Pfam protein_match 405291 405572 . + . Parent=LTnewLM_200015100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_20 Pfam protein_match 405297 406058 . + . Parent=LTnewLM_200015100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_20 Pfam protein_match 405780 406631 . + . Parent=LTnewLM_200015100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_20 AUGUSTUS gene 409782 410816 1 + . ID=LTnewLM_200015200 LTnewLM_20 AUGUSTUS mRNA 409782 410816 1 + . ID=LTnewLM_200015200.1;Parent=LTnewLM_200015200 LTnewLM_20 AUGUSTUS CDS 409782 410816 1 + 0 ID=LTnewLM_200015200.1:CDS:1;Parent=LTnewLM_200015200.1 ### LTnewLM_20 . polypeptide 409782 410816 . + . ID=LTnewLM_200015200.1:pep;Derives_from=LTnewLM_200015200.1;orthologous_to=LmjF.20.0970_mRNA;ortholog_cluster=OG0001995;product=term%3DARD/ARD' family/AraC-like ligand binding domain/Cupin domain/Eukaryotic protein of unknown function (DUF953)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03079|Pfam:PF02311|Pfam:PF07883|Pfam:PF06110;Ontology_term=GO:0055114,GO:0010309,GO:0006355 LTnewLM_20 Pfam protein_match 409797 410261 . + . Parent=LTnewLM_200015200.1:pep;Name=PF03079;signature_desc=ARD/ARD' family;Ontology_term=GO:0010309,GO:0055114 LTnewLM_20 Pfam protein_match 410034 410225 . + . Parent=LTnewLM_200015200.1:pep;Name=PF02311;signature_desc=AraC-like ligand binding domain;Ontology_term=GO:0006355 LTnewLM_20 Pfam protein_match 410049 410234 . + . Parent=LTnewLM_200015200.1:pep;Name=PF07883;signature_desc=Cupin domain LTnewLM_20 Pfam protein_match 410427 410708 . + . Parent=LTnewLM_200015200.1:pep;Name=PF06110;signature_desc=Eukaryotic protein of unknown function (DUF953) ### LTnewLM_20 AUGUSTUS gene 412170 414203 1 + . ID=LTnewLM_200015300 LTnewLM_20 AUGUSTUS mRNA 412170 414203 1 + . ID=LTnewLM_200015300.1;Parent=LTnewLM_200015300 LTnewLM_20 AUGUSTUS CDS 412170 414203 1 + 0 ID=LTnewLM_200015300.1:CDS:1;Parent=LTnewLM_200015300.1 ### LTnewLM_20 . polypeptide 412170 414203 . + . ID=LTnewLM_200015300.1:pep;Derives_from=LTnewLM_200015300.1;orthologous_to=LmjF.20.0980_mRNA;ortholog_cluster=OG0001996;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 415267 416739 . + . ID=LTnewLM_200015400:pseudogene;coverage=0.970;sequence_ID=0.895;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.0990_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 415267 416739 . + . ID=LTnewLM_200015400.1;Parent=LTnewLM_200015400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 415267 416739 . + . ID=LTnewLM_200015400.1:pseudogenic_exon:1;Parent=LTnewLM_200015400.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 415267 416739 . + . ID=LTnewLM_200015400.1:pep;Derives_from=LTnewLM_200015400.1;orthologous_to=LmjF.20.0990_mRNA;ortholog_cluster=OG0007497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 419438 421592 . + . ID=LTnewLM_200015500:pseudogene;coverage=0.990;sequence_ID=0.913;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.1000_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 419438 421592 . + . ID=LTnewLM_200015500.1;Parent=LTnewLM_200015500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 419438 421592 . + . ID=LTnewLM_200015500.1:pseudogenic_exon:1;Parent=LTnewLM_200015500.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 419438 421592 . + . ID=LTnewLM_200015500.1:pep;Derives_from=LTnewLM_200015500.1;orthologous_to=LmjF.20.1000_mRNA;ortholog_cluster=OG0007498;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 422556 422879 1 + . ID=LTnewLM_200015600 LTnewLM_20 AUGUSTUS mRNA 422556 422879 1 + . ID=LTnewLM_200015600.1;Parent=LTnewLM_200015600 LTnewLM_20 AUGUSTUS CDS 422556 422879 1 + 0 ID=LTnewLM_200015600.1:CDS:1;Parent=LTnewLM_200015600.1 ### LTnewLM_20 . polypeptide 422556 422879 . + . ID=LTnewLM_200015600.1:pep;Derives_from=LTnewLM_200015600.1;orthologous_to=LmjF.20.1010_mRNA;ortholog_cluster=OG0001997;product=term%3DGlutaredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462;Ontology_term=GO:0009055,GO:0045454,GO:0015035 LTnewLM_20 Pfam protein_match 422622 422804 . + . Parent=LTnewLM_200015600.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 ### LTnewLM_20 . pseudogene 424641 427952 . + . ID=LTnewLM_200015700:pseudogene;coverage=0.999;sequence_ID=0.908;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.1020_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 424641 427952 . + . ID=LTnewLM_200015700.1;Parent=LTnewLM_200015700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 424641 427952 . + . ID=LTnewLM_200015700.1:pseudogenic_exon:1;Parent=LTnewLM_200015700.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 424641 427952 . + . ID=LTnewLM_200015700.1:pep;Derives_from=LTnewLM_200015700.1;orthologous_to=LmjF.20.1020_mRNA;ortholog_cluster=OG0007499;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 434953 435963 1 + . ID=LTnewLM_200015800 LTnewLM_20 AUGUSTUS mRNA 434953 435963 1 + . ID=LTnewLM_200015800.1;Parent=LTnewLM_200015800 LTnewLM_20 AUGUSTUS CDS 434953 435963 1 + 0 ID=LTnewLM_200015800.1:CDS:1;Parent=LTnewLM_200015800.1 ### LTnewLM_20 . polypeptide 434953 435963 . + . ID=LTnewLM_200015800.1:pep;Derives_from=LTnewLM_200015800.1;orthologous_to=LmjF.20.1030_mRNA;ortholog_cluster=OG0001998;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 440886 443573 1 + . ID=LTnewLM_200015900 LTnewLM_20 AUGUSTUS mRNA 440886 443573 1 + . ID=LTnewLM_200015900.1;Parent=LTnewLM_200015900 LTnewLM_20 AUGUSTUS CDS 440886 443573 1 + 0 ID=LTnewLM_200015900.1:CDS:1;Parent=LTnewLM_200015900.1 ### LTnewLM_20 . polypeptide 440886 443573 . + . ID=LTnewLM_200015900.1:pep;Derives_from=LTnewLM_200015900.1;orthologous_to=LmjF.20.1040_mRNA;ortholog_cluster=OG0001999;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 Liftoff gene 452143 455253 . + . ID=LTnewLM_200016000;coverage=0.999;sequence_ID=0.913;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.1050_0 LTnewLM_20 Liftoff mRNA 452143 455253 . + . ID=LTnewLM_200016000.1;Parent=LTnewLM_200016000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 Liftoff CDS 452143 455253 . + 0 ID=LTnewLM_200016000.1:CDS:1;Parent=LTnewLM_200016000.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 452143 455253 . + . ID=LTnewLM_200016000.1:pep;Derives_from=LTnewLM_200016000.1;orthologous_to=LmjF.20.1050_mRNA;ortholog_cluster=OG0002000;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 458379 462329 1 + . ID=LTnewLM_200016100 LTnewLM_20 AUGUSTUS mRNA 458379 462329 1 + . ID=LTnewLM_200016100.1;Parent=LTnewLM_200016100 LTnewLM_20 AUGUSTUS CDS 458379 462329 1 + 0 ID=LTnewLM_200016100.1:CDS:1;Parent=LTnewLM_200016100.1 ### LTnewLM_20 . polypeptide 458379 462329 . + . ID=LTnewLM_200016100.1:pep;Derives_from=LTnewLM_200016100.1;orthologous_to=LmjF.20.1060_mRNA;ortholog_cluster=OG0002001;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 467061 468167 . + . ID=LTnewLM_200016200:pseudogene;coverage=0.948;sequence_ID=0.874;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.1070_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 467061 468167 . + . ID=LTnewLM_200016200.1;Parent=LTnewLM_200016200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 467061 468167 . + . ID=LTnewLM_200016200.1:pseudogenic_exon:1;Parent=LTnewLM_200016200.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 467061 468167 . + . ID=LTnewLM_200016200.1:pep;Derives_from=LTnewLM_200016200.1;orthologous_to=LmjF.20.1070_mRNA;ortholog_cluster=OG0007500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 Liftoff gene 469011 476951 . + . ID=LTnewLM_200016300;coverage=0.997;sequence_ID=0.922;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.1080_0 LTnewLM_20 Liftoff mRNA 469011 476951 . + . ID=LTnewLM_200016300.1;Parent=LTnewLM_200016300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 Liftoff CDS 469011 476951 . + 0 ID=LTnewLM_200016300.1:CDS:1;Parent=LTnewLM_200016300.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 469011 476951 . + . ID=LTnewLM_200016300.1:pep;Derives_from=LTnewLM_200016300.1;orthologous_to=LmjF.20.1080_mRNA;ortholog_cluster=OG0002002;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 Liftoff gene 477927 484829 . + . ID=LTnewLM_200016400;coverage=0.994;sequence_ID=0.931;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.1090_0 LTnewLM_20 Liftoff mRNA 477927 484829 . + . ID=LTnewLM_200016400.1;Parent=LTnewLM_200016400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 Liftoff CDS 477927 484829 . + 0 ID=LTnewLM_200016400.1:CDS:1;Parent=LTnewLM_200016400.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 477927 484829 . + . ID=LTnewLM_200016400.1:pep;Derives_from=LTnewLM_200016400.1;orthologous_to=LmjF.20.1090_mRNA;ortholog_cluster=OG0002003;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 486258 492107 1 + . ID=LTnewLM_200016500 LTnewLM_20 AUGUSTUS mRNA 486258 492107 1 + . ID=LTnewLM_200016500.1;Parent=LTnewLM_200016500 LTnewLM_20 AUGUSTUS CDS 486258 492107 1 + 0 ID=LTnewLM_200016500.1:CDS:1;Parent=LTnewLM_200016500.1 ### LTnewLM_20 . polypeptide 486258 492107 . + . ID=LTnewLM_200016500.1:pep;Derives_from=LTnewLM_200016500.1;orthologous_to=LmjF.20.1100_mRNA;ortholog_cluster=OG0002004;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_20 Pfam protein_match 487530 487577 . + . Parent=LTnewLM_200016500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 488298 488336 . + . Parent=LTnewLM_200016500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_20 Pfam protein_match 488445 488501 . + . Parent=LTnewLM_200016500.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_20 AUGUSTUS gene 493016 496555 0.99 + . ID=LTnewLM_200016600 LTnewLM_20 AUGUSTUS mRNA 493016 496555 0.99 + . ID=LTnewLM_200016600.1;Parent=LTnewLM_200016600 LTnewLM_20 AUGUSTUS CDS 493016 496555 0.99 + 0 ID=LTnewLM_200016600.1:CDS:1;Parent=LTnewLM_200016600.1 ### LTnewLM_20 . polypeptide 493016 496555 . + . ID=LTnewLM_200016600.1:pep;Derives_from=LTnewLM_200016600.1;orthologous_to=LmjF.20.1110_mRNA;ortholog_cluster=OG0002005;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 501921 511811 1 + . ID=LTnewLM_200016700 LTnewLM_20 AUGUSTUS mRNA 501921 511811 1 + . ID=LTnewLM_200016700.1;Parent=LTnewLM_200016700 LTnewLM_20 AUGUSTUS CDS 501921 511811 1 + 0 ID=LTnewLM_200016700.1:CDS:1;Parent=LTnewLM_200016700.1 ### LTnewLM_20 . polypeptide 501921 511811 . + . ID=LTnewLM_200016700.1:pep;Derives_from=LTnewLM_200016700.1;orthologous_to=LmjF.20.1120_mRNA;ortholog_cluster=OG0002006;product=term%3DFAT domain/Phosphatidylinositol 3- and 4-kinase/FATC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02259|Pfam:PF00454|Pfam:PF02260;Ontology_term=GO:0016773,GO:0005515 LTnewLM_20 Pfam protein_match 508773 509846 . + . Parent=LTnewLM_200016700.1:pep;Name=PF02259;signature_desc=FAT domain;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 510756 511505 . + . Parent=LTnewLM_200016700.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_20 Pfam protein_match 511716 511805 . + . Parent=LTnewLM_200016700.1:pep;Name=PF02260;signature_desc=FATC domain;Ontology_term=GO:0005515 ### LTnewLM_20 . pseudogene 512534 515781 . + . ID=LTnewLM_200016800:pseudogene;coverage=0.987;sequence_ID=0.937;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.1130_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 512534 515781 . + . ID=LTnewLM_200016800.1;Parent=LTnewLM_200016800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 513695 515781 . + . ID=LTnewLM_200016800.1:pseudogenic_exon:1;Parent=LTnewLM_200016800.1;extra_copy_number=0 LTnewLM_20 . pseudogenic_transcript 513704 515781 . + . ID=LTnewLM_200016800.2;Parent=LTnewLM_200016800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 513819 515781 . + . ID=LTnewLM_200016800.2:pseudogenic_exon:1;Parent=LTnewLM_200016800.2;extra_copy_number=0 ### LTnewLM_20 . polypeptide 513695 515781 . + . ID=LTnewLM_200016800.1:pep;Derives_from=LTnewLM_200016800.1;product=term%3Dhypothetical protein ### LTnewLM_20 . polypeptide 513819 515781 . + . ID=LTnewLM_200016800.2:pep;Derives_from=LTnewLM_200016800.2;orthologous_to=LmjF.20.1130.1_mRNA,LmjF.20.1130.2_mRNA;ortholog_cluster=OG0000521;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_20 Pfam protein_match 514227 514412 . + . Parent=LTnewLM_200016800.2:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_20 AUGUSTUS gene 516742 517701 1 + . ID=LTnewLM_200016900 LTnewLM_20 AUGUSTUS mRNA 516742 517701 1 + . ID=LTnewLM_200016900.1;Parent=LTnewLM_200016900 LTnewLM_20 AUGUSTUS CDS 516742 517701 1 + 0 ID=LTnewLM_200016900.1:CDS:1;Parent=LTnewLM_200016900.1 ### LTnewLM_20 . polypeptide 516742 517701 . + . ID=LTnewLM_200016900.1:pep;Derives_from=LTnewLM_200016900.1;orthologous_to=LmjF.20.1140_mRNA;ortholog_cluster=OG0002007;product=term%3DYIF1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03878 LTnewLM_20 Pfam protein_match 516841 517680 . + . Parent=LTnewLM_200016900.1:pep;Name=PF03878;signature_desc=YIF1 ### LTnewLM_20 AUGUSTUS gene 518540 519349 1 + . ID=LTnewLM_200017000 LTnewLM_20 AUGUSTUS mRNA 518540 519349 1 + . ID=LTnewLM_200017000.1;Parent=LTnewLM_200017000 LTnewLM_20 AUGUSTUS CDS 518540 519349 1 + 0 ID=LTnewLM_200017000.1:CDS:1;Parent=LTnewLM_200017000.1 ### LTnewLM_20 . polypeptide 518540 519349 . + . ID=LTnewLM_200017000.1:pep;Derives_from=LTnewLM_200017000.1;orthologous_to=LmjF.20.1150_mRNA;ortholog_cluster=OG0002008;product=term%3DPRP38 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03371 LTnewLM_20 Pfam protein_match 518576 518923 . + . Parent=LTnewLM_200017000.1:pep;Name=PF03371;signature_desc=PRP38 family ### LTnewLM_20 AUGUSTUS gene 519965 520864 1 + . ID=LTnewLM_200017100 LTnewLM_20 AUGUSTUS mRNA 519965 520864 1 + . ID=LTnewLM_200017100.1;Parent=LTnewLM_200017100 LTnewLM_20 AUGUSTUS CDS 519965 520864 1 + 0 ID=LTnewLM_200017100.1:CDS:1;Parent=LTnewLM_200017100.1 ### LTnewLM_20 . polypeptide 519965 520864 . + . ID=LTnewLM_200017100.1:pep;Derives_from=LTnewLM_200017100.1;orthologous_to=LmjF.20.1160_mRNA;ortholog_cluster=OG0002009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 521717 522979 1 + . ID=LTnewLM_200017200 LTnewLM_20 AUGUSTUS mRNA 521717 522979 1 + . ID=LTnewLM_200017200.1;Parent=LTnewLM_200017200 LTnewLM_20 AUGUSTUS CDS 521717 522979 1 + 0 ID=LTnewLM_200017200.1:CDS:1;Parent=LTnewLM_200017200.1 ### LTnewLM_20 . polypeptide 521717 522979 . + . ID=LTnewLM_200017200.1:pep;Derives_from=LTnewLM_200017200.1;product=term%3DPutative esterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00756 LTnewLM_20 Pfam protein_match 522254 522913 . + . Parent=LTnewLM_200017200.1:pep;Name=PF00756;signature_desc=Putative esterase ### LTnewLM_20 AUGUSTUS gene 537480 540441 1.48 + . ID=LTnewLM_200017300 LTnewLM_20 AUGUSTUS mRNA 537480 540441 0.52 + . ID=LTnewLM_200017300.1;Parent=LTnewLM_200017300 LTnewLM_20 AUGUSTUS CDS 537480 537511 1 + 0 ID=LTnewLM_200017300.1:CDS:1;Parent=LTnewLM_200017300.1 LTnewLM_20 AUGUSTUS CDS 537579 540441 0.52 + 1 ID=LTnewLM_200017300.1:CDS:2;Parent=LTnewLM_200017300.1 LTnewLM_20 AUGUSTUS mRNA 538441 540441 0.96 + . ID=LTnewLM_200017300.2;Parent=LTnewLM_200017300 LTnewLM_20 AUGUSTUS CDS 538441 540441 0.96 + 0 ID=LTnewLM_200017300.2:CDS:1;Parent=LTnewLM_200017300.2 ### LTnewLM_20 . polypeptide 537480 540441 . + . ID=LTnewLM_200017300.1:pep;Derives_from=LTnewLM_200017300.1;orthologous_to=LTnewLM_200017300.2,LTnewLM_200017400.1,LmjF.20.1180_mRNA,LmjF.20.1185_mRNA;ortholog_cluster=OG0000085;product=term%3DDomain of unknown function (DUF6721)/Domain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20481|Pfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 537558 537836 . + . Parent=LTnewLM_200017300.1:pep;Name=PF20481;signature_desc=Domain of unknown function (DUF6721) LTnewLM_20 Pfam protein_match 538434 538724 . + . Parent=LTnewLM_200017300.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 538872 539798 . + . Parent=LTnewLM_200017300.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 . polypeptide 538441 540441 . + . ID=LTnewLM_200017300.2:pep;Derives_from=LTnewLM_200017300.2;orthologous_to=LTnewLM_200017300.1,LTnewLM_200017400.1,LmjF.20.1180_mRNA,LmjF.20.1185_mRNA;ortholog_cluster=OG0000085;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 538501 538791 . + . Parent=LTnewLM_200017300.2:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 538939 539865 . + . Parent=LTnewLM_200017300.2:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 AUGUSTUS gene 543241 545706 1 + . ID=LTnewLM_200017400 LTnewLM_20 AUGUSTUS mRNA 543241 545706 1 + . ID=LTnewLM_200017400.1;Parent=LTnewLM_200017400 LTnewLM_20 AUGUSTUS CDS 543241 545706 1 + 0 ID=LTnewLM_200017400.1:CDS:1;Parent=LTnewLM_200017400.1 ### LTnewLM_20 . polypeptide 543241 545706 . + . ID=LTnewLM_200017400.1:pep;Derives_from=LTnewLM_200017400.1;orthologous_to=LTnewLM_200017300.1,LTnewLM_200017300.2,LmjF.20.1180_mRNA,LmjF.20.1185_mRNA;ortholog_cluster=OG0000085;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 543766 544056 . + . Parent=LTnewLM_200017400.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 544204 545130 . + . Parent=LTnewLM_200017400.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 AUGUSTUS gene 548386 550449 1 + . ID=LTnewLM_200017500 LTnewLM_20 AUGUSTUS mRNA 548386 550449 1 + . ID=LTnewLM_200017500.1;Parent=LTnewLM_200017500 LTnewLM_20 AUGUSTUS CDS 548386 550449 1 + 0 ID=LTnewLM_200017500.1:CDS:1;Parent=LTnewLM_200017500.1 ### LTnewLM_20 . polypeptide 548386 550449 . + . ID=LTnewLM_200017500.1:pep;Derives_from=LTnewLM_200017500.1;orthologous_to=LmjF.20.1190_mRNA;ortholog_cluster=OG0002010;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 548470 548754 . + . Parent=LTnewLM_200017500.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 548905 549867 . + . Parent=LTnewLM_200017500.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 AUGUSTUS gene 554784 557015 1 + . ID=LTnewLM_200017600 LTnewLM_20 AUGUSTUS mRNA 554784 557015 1 + . ID=LTnewLM_200017600.1;Parent=LTnewLM_200017600 LTnewLM_20 AUGUSTUS CDS 554784 557015 1 + 0 ID=LTnewLM_200017600.1:CDS:1;Parent=LTnewLM_200017600.1 ### LTnewLM_20 . polypeptide 554784 557015 . + . ID=LTnewLM_200017600.1:pep;Derives_from=LTnewLM_200017600.1;orthologous_to=LmjF.20.1200_mRNA;ortholog_cluster=OG0002011;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 554862 555194 . + . Parent=LTnewLM_200017600.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 555345 556280 . + . Parent=LTnewLM_200017600.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 AUGUSTUS gene 560002 563319 1 + . ID=LTnewLM_200017700 LTnewLM_20 AUGUSTUS mRNA 560002 563319 1 + . ID=LTnewLM_200017700.1;Parent=LTnewLM_200017700 LTnewLM_20 AUGUSTUS CDS 560002 563319 1 + 0 ID=LTnewLM_200017700.1:CDS:1;Parent=LTnewLM_200017700.1 ### LTnewLM_20 . polypeptide 560002 563319 . + . ID=LTnewLM_200017700.1:pep;Derives_from=LTnewLM_200017700.1;orthologous_to=LmjF.20.1210_mRNA;ortholog_cluster=OG0002012;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_20 Pfam protein_match 560812 561186 . + . Parent=LTnewLM_200017700.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_20 Pfam protein_match 561511 562392 . + . Parent=LTnewLM_200017700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_20 AUGUSTUS gene 564566 565006 1 + . ID=LTnewLM_200017800 LTnewLM_20 AUGUSTUS mRNA 564566 565006 1 + . ID=LTnewLM_200017800.1;Parent=LTnewLM_200017800 LTnewLM_20 AUGUSTUS CDS 564566 565006 1 + 0 ID=LTnewLM_200017800.1:CDS:1;Parent=LTnewLM_200017800.1 ### LTnewLM_20 . polypeptide 564566 565006 . + . ID=LTnewLM_200017800.1:pep;Derives_from=LTnewLM_200017800.1;orthologous_to=LmjF.20.1220_mRNA;ortholog_cluster=OG0002013;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 564650 564907 . + . Parent=LTnewLM_200017800.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 567627 568028 1 + . ID=LTnewLM_200017900 LTnewLM_20 AUGUSTUS mRNA 567627 568028 1 + . ID=LTnewLM_200017900.1;Parent=LTnewLM_200017900 LTnewLM_20 AUGUSTUS CDS 567627 568028 1 + 0 ID=LTnewLM_200017900.1:CDS:1;Parent=LTnewLM_200017900.1 ### LTnewLM_20 . polypeptide 567627 568028 . + . ID=LTnewLM_200017900.1:pep;Derives_from=LTnewLM_200017900.1;orthologous_to=LmjF.20.1230_mRNA;ortholog_cluster=OG0002014;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 567672 567977 . + . Parent=LTnewLM_200017900.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 572383 580653 1 + . ID=LTnewLM_200018000 LTnewLM_20 AUGUSTUS mRNA 572383 580653 1 + . ID=LTnewLM_200018000.1;Parent=LTnewLM_200018000 LTnewLM_20 AUGUSTUS CDS 572383 580653 1 + 0 ID=LTnewLM_200018000.1:CDS:1;Parent=LTnewLM_200018000.1 ### LTnewLM_20 . polypeptide 572383 580653 . + . ID=LTnewLM_200018000.1:pep;Derives_from=LTnewLM_200018000.1;orthologous_to=LmjF.20.1240_mRNA;ortholog_cluster=OG0002015;product=term%3DRaptor N-terminal CASPase like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14538 LTnewLM_20 Pfam protein_match 573349 573744 . + . Parent=LTnewLM_200018000.1:pep;Name=PF14538;signature_desc=Raptor N-terminal CASPase like domain ### LTnewLM_20 AUGUSTUS gene 581870 582667 1 + . ID=LTnewLM_200018100 LTnewLM_20 AUGUSTUS mRNA 581870 582667 1 + . ID=LTnewLM_200018100.1;Parent=LTnewLM_200018100 LTnewLM_20 AUGUSTUS CDS 581870 582667 1 + 0 ID=LTnewLM_200018100.1:CDS:1;Parent=LTnewLM_200018100.1 ### LTnewLM_20 . polypeptide 581870 582667 . + . ID=LTnewLM_200018100.1:pep;Derives_from=LTnewLM_200018100.1;orthologous_to=LmjF.20.1250_mRNA;ortholog_cluster=OG0002016;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 582344 582628 . + . Parent=LTnewLM_200018100.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 582759 582998 1 + . ID=LTnewLM_200018200 LTnewLM_20 AUGUSTUS mRNA 582759 582998 1 + . ID=LTnewLM_200018200.1;Parent=LTnewLM_200018200 LTnewLM_20 AUGUSTUS CDS 582759 582998 1 + 0 ID=LTnewLM_200018200.1:CDS:1;Parent=LTnewLM_200018200.1 ### LTnewLM_20 . polypeptide 582759 582998 . + . ID=LTnewLM_200018200.1:pep;Derives_from=LTnewLM_200018200.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 585805 588318 1 + . ID=LTnewLM_200018300 LTnewLM_20 AUGUSTUS mRNA 585805 588318 1 + . ID=LTnewLM_200018300.1;Parent=LTnewLM_200018300 LTnewLM_20 AUGUSTUS CDS 585805 588318 1 + 0 ID=LTnewLM_200018300.1:CDS:1;Parent=LTnewLM_200018300.1 ### LTnewLM_20 . polypeptide 585805 588318 . + . ID=LTnewLM_200018300.1:pep;Derives_from=LTnewLM_200018300.1;orthologous_to=LmjF.20.1260_mRNA;ortholog_cluster=OG0002017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 590592 591161 1 + . ID=LTnewLM_200018400 LTnewLM_20 AUGUSTUS mRNA 590592 591161 1 + . ID=LTnewLM_200018400.1;Parent=LTnewLM_200018400 LTnewLM_20 AUGUSTUS CDS 590592 591161 1 + 0 ID=LTnewLM_200018400.1:CDS:1;Parent=LTnewLM_200018400.1 ### LTnewLM_20 . polypeptide 590592 591161 . + . ID=LTnewLM_200018400.1:pep;Derives_from=LTnewLM_200018400.1;orthologous_to=LmjF.20.1270_mRNA;ortholog_cluster=OG0002018;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 593914 594369 1 + . ID=LTnewLM_200018500 LTnewLM_20 AUGUSTUS mRNA 593914 594369 1 + . ID=LTnewLM_200018500.1;Parent=LTnewLM_200018500 LTnewLM_20 AUGUSTUS CDS 593914 594369 1 + 0 ID=LTnewLM_200018500.1:CDS:1;Parent=LTnewLM_200018500.1 ### LTnewLM_20 . polypeptide 593914 594369 . + . ID=LTnewLM_200018500.1:pep;Derives_from=LTnewLM_200018500.1;orthologous_to=LmjF.20.1280_mRNA;ortholog_cluster=OG0002019;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 593965 594255 . + . Parent=LTnewLM_200018500.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 597857 598699 1 + . ID=LTnewLM_200018600 LTnewLM_20 AUGUSTUS mRNA 597857 598699 1 + . ID=LTnewLM_200018600.1;Parent=LTnewLM_200018600 LTnewLM_20 AUGUSTUS CDS 597857 598699 1 + 0 ID=LTnewLM_200018600.1:CDS:1;Parent=LTnewLM_200018600.1 ### LTnewLM_20 . polypeptide 597857 598699 . + . ID=LTnewLM_200018600.1:pep;Derives_from=LTnewLM_200018600.1;orthologous_to=LmjF.20.1290_mRNA;ortholog_cluster=OG0002020;product=term%3DNucleosome assembly protein (NAP)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00956;Ontology_term=GO:0005634,GO:0006334 LTnewLM_20 Pfam protein_match 598088 598528 . + . Parent=LTnewLM_200018600.1:pep;Name=PF00956;signature_desc=Nucleosome assembly protein (NAP);Ontology_term=GO:0006334,GO:0005634 ### LTnewLM_20 AUGUSTUS gene 601233 601643 1 + . ID=LTnewLM_200018700 LTnewLM_20 AUGUSTUS mRNA 601233 601643 1 + . ID=LTnewLM_200018700.1;Parent=LTnewLM_200018700 LTnewLM_20 AUGUSTUS CDS 601233 601643 1 + 0 ID=LTnewLM_200018700.1:CDS:1;Parent=LTnewLM_200018700.1 ### LTnewLM_20 . polypeptide 601233 601643 . + . ID=LTnewLM_200018700.1:pep;Derives_from=LTnewLM_200018700.1;orthologous_to=LmjF.20.1300_mRNA;ortholog_cluster=OG0002021;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 601275 601577 . + . Parent=LTnewLM_200018700.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 603638 604033 1 + . ID=LTnewLM_200018800 LTnewLM_20 AUGUSTUS mRNA 603638 604033 1 + . ID=LTnewLM_200018800.1;Parent=LTnewLM_200018800 LTnewLM_20 AUGUSTUS CDS 603638 604033 1 + 0 ID=LTnewLM_200018800.1:CDS:1;Parent=LTnewLM_200018800.1 ### LTnewLM_20 . polypeptide 603638 604033 . + . ID=LTnewLM_200018800.1:pep;Derives_from=LTnewLM_200018800.1;orthologous_to=LmjF.20.1310_mRNA;ortholog_cluster=OG0002022;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_20 Pfam protein_match 603683 603979 . + . Parent=LTnewLM_200018800.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_20 AUGUSTUS gene 608596 609855 1 + . ID=LTnewLM_200018900 LTnewLM_20 AUGUSTUS mRNA 608596 609855 1 + . ID=LTnewLM_200018900.1;Parent=LTnewLM_200018900 LTnewLM_20 AUGUSTUS CDS 608596 609855 1 + 0 ID=LTnewLM_200018900.1:CDS:1;Parent=LTnewLM_200018900.1 ### LTnewLM_20 . polypeptide 608596 609855 . + . ID=LTnewLM_200018900.1:pep;Derives_from=LTnewLM_200018900.1;orthologous_to=LmjF.20.1320_mRNA;ortholog_cluster=OG0002023;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 612389 613534 1 + . ID=LTnewLM_200019000 LTnewLM_20 AUGUSTUS mRNA 612389 613534 1 + . ID=LTnewLM_200019000.1;Parent=LTnewLM_200019000 LTnewLM_20 AUGUSTUS CDS 612389 613534 1 + 0 ID=LTnewLM_200019000.1:CDS:1;Parent=LTnewLM_200019000.1 ### LTnewLM_20 . polypeptide 612389 613534 . + . ID=LTnewLM_200019000.1:pep;Derives_from=LTnewLM_200019000.1;orthologous_to=LmjF.20.1330_mRNA;ortholog_cluster=OG0002024;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_20 Pfam protein_match 612575 613258 . + . Parent=LTnewLM_200019000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_20 Pfam protein_match 612575 613426 . + . Parent=LTnewLM_200019000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_20 AUGUSTUS gene 615448 616393 1 + . ID=LTnewLM_200019100 LTnewLM_20 AUGUSTUS mRNA 615448 616393 1 + . ID=LTnewLM_200019100.1;Parent=LTnewLM_200019100 LTnewLM_20 AUGUSTUS CDS 615448 615483 1 + 0 ID=LTnewLM_200019100.1:CDS:1;Parent=LTnewLM_200019100.1 LTnewLM_20 AUGUSTUS CDS 615527 616393 1 + 0 ID=LTnewLM_200019100.1:CDS:2;Parent=LTnewLM_200019100.1 ### LTnewLM_20 . polypeptide 615448 616393 . + . ID=LTnewLM_200019100.1:pep;Derives_from=LTnewLM_200019100.1;orthologous_to=LmjF.20.1340_mRNA;ortholog_cluster=OG0002025;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_20 Pfam protein_match 615550 616236 . + . Parent=LTnewLM_200019100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_20 Pfam protein_match 615550 616236 . + . Parent=LTnewLM_200019100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_20 AUGUSTUS gene 619289 622288 1 + . ID=LTnewLM_200019200 LTnewLM_20 AUGUSTUS mRNA 619289 622288 1 + . ID=LTnewLM_200019200.1;Parent=LTnewLM_200019200 LTnewLM_20 AUGUSTUS CDS 619289 622288 1 + 0 ID=LTnewLM_200019200.1:CDS:1;Parent=LTnewLM_200019200.1 ### LTnewLM_20 . polypeptide 619289 622288 . + . ID=LTnewLM_200019200.1:pep;Derives_from=LTnewLM_200019200.1;orthologous_to=LmjF.20.1350_mRNA;ortholog_cluster=OG0002026;product=term%3DAdaptin N terminal region/Coatomer beta C-terminal region/Coatomer beta subunit appendage platform%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF07718|Pfam:PF14806;Ontology_term=GO:0005198,GO:0030117,GO:0030126,GO:0016192,GO:0006886 LTnewLM_20 Pfam protein_match 619364 620746 . + . Parent=LTnewLM_200019200.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_20 Pfam protein_match 621392 621808 . + . Parent=LTnewLM_200019200.1:pep;Name=PF07718;signature_desc=Coatomer beta C-terminal region;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030126 LTnewLM_20 Pfam protein_match 621833 622255 . + . Parent=LTnewLM_200019200.1:pep;Name=PF14806;signature_desc=Coatomer beta subunit appendage platform ### LTnewLM_20 AUGUSTUS gene 623382 624599 1 + . ID=LTnewLM_200019300 LTnewLM_20 AUGUSTUS mRNA 623382 624599 1 + . ID=LTnewLM_200019300.1;Parent=LTnewLM_200019300 LTnewLM_20 AUGUSTUS CDS 623382 624599 1 + 0 ID=LTnewLM_200019300.1:CDS:1;Parent=LTnewLM_200019300.1 ### LTnewLM_20 . polypeptide 623382 624599 . + . ID=LTnewLM_200019300.1:pep;Derives_from=LTnewLM_200019300.1;orthologous_to=LmjF.20.1360_mRNA;ortholog_cluster=OG0002027;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 626321 628089 1 + . ID=LTnewLM_200019400 LTnewLM_20 AUGUSTUS mRNA 626321 628089 1 + . ID=LTnewLM_200019400.1;Parent=LTnewLM_200019400 LTnewLM_20 AUGUSTUS CDS 626321 627085 1 + 0 ID=LTnewLM_200019400.1:CDS:1;Parent=LTnewLM_200019400.1 LTnewLM_20 AUGUSTUS CDS 627130 628089 1 + 0 ID=LTnewLM_200019400.1:CDS:2;Parent=LTnewLM_200019400.1 ### LTnewLM_20 . polypeptide 626321 628089 . + . ID=LTnewLM_200019400.1:pep;Derives_from=LTnewLM_200019400.1;orthologous_to=LmjF.20.1365_mRNA;ortholog_cluster=OG0002028;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 626888 626971 . + . Parent=LTnewLM_200019400.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 627083 627157 . + . Parent=LTnewLM_200019400.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 627170 627229 . + . Parent=LTnewLM_200019400.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 627275 627361 . + . Parent=LTnewLM_200019400.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_20 AUGUSTUS gene 633153 634793 1 + . ID=LTnewLM_200019500 LTnewLM_20 AUGUSTUS mRNA 633153 634793 1 + . ID=LTnewLM_200019500.1;Parent=LTnewLM_200019500 LTnewLM_20 AUGUSTUS CDS 633153 634793 1 + 0 ID=LTnewLM_200019500.1:CDS:1;Parent=LTnewLM_200019500.1 ### LTnewLM_20 . polypeptide 633153 634793 . + . ID=LTnewLM_200019500.1:pep;Derives_from=LTnewLM_200019500.1;orthologous_to=LmjF.20.1370_mRNA;ortholog_cluster=OG0002029;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 633723 633806 . + . Parent=LTnewLM_200019500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 633957 634034 . + . Parent=LTnewLM_200019500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 634047 634106 . + . Parent=LTnewLM_200019500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_20 Pfam protein_match 634152 634238 . + . Parent=LTnewLM_200019500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_20 . pseudogene 636894 640851 . + . ID=LTnewLM_200019600:pseudogene;coverage=0.975;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.20.1380_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 636894 640851 . + . ID=LTnewLM_200019600.1;Parent=LTnewLM_200019600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 636894 640851 . + . ID=LTnewLM_200019600.1:pseudogenic_exon:1;Parent=LTnewLM_200019600.1;extra_copy_number=0 ### LTnewLM_20 . polypeptide 636894 640851 . + . ID=LTnewLM_200019600.1:pep;Derives_from=LTnewLM_200019600.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 642026 643384 1 + . ID=LTnewLM_200019700 LTnewLM_20 AUGUSTUS mRNA 642026 643384 1 + . ID=LTnewLM_200019700.1;Parent=LTnewLM_200019700 LTnewLM_20 AUGUSTUS CDS 642026 643384 1 + 0 ID=LTnewLM_200019700.1:CDS:1;Parent=LTnewLM_200019700.1 ### LTnewLM_20 . polypeptide 642026 643384 . + . ID=LTnewLM_200019700.1:pep;Derives_from=LTnewLM_200019700.1;orthologous_to=LmjF.20.1390_mRNA;ortholog_cluster=OG0002030;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 644160 645692 1 + . ID=LTnewLM_200019800 LTnewLM_20 AUGUSTUS mRNA 644160 645692 1 + . ID=LTnewLM_200019800.1;Parent=LTnewLM_200019800 LTnewLM_20 AUGUSTUS CDS 644160 645692 1 + 0 ID=LTnewLM_200019800.1:CDS:1;Parent=LTnewLM_200019800.1 ### LTnewLM_20 . polypeptide 644160 645692 . + . ID=LTnewLM_200019800.1:pep;Derives_from=LTnewLM_200019800.1;orthologous_to=LmjF.20.1400_mRNA;ortholog_cluster=OG0002031;product=term%3DArmadillo/beta-catenin-like repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00514;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 644499 644618 . + . Parent=LTnewLM_200019800.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_20 Pfam protein_match 644628 644741 . + . Parent=LTnewLM_200019800.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 ### LTnewLM_20 AUGUSTUS gene 647622 650543 1 + . ID=LTnewLM_200019900 LTnewLM_20 AUGUSTUS mRNA 647622 650543 1 + . ID=LTnewLM_200019900.1;Parent=LTnewLM_200019900 LTnewLM_20 AUGUSTUS CDS 647622 650543 1 + 0 ID=LTnewLM_200019900.1:CDS:1;Parent=LTnewLM_200019900.1 ### LTnewLM_20 . polypeptide 647622 650543 . + . ID=LTnewLM_200019900.1:pep;Derives_from=LTnewLM_200019900.1;orthologous_to=LmjF.20.1410_mRNA;ortholog_cluster=OG0002032;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 651503 655174 1 + . ID=LTnewLM_200020000 LTnewLM_20 AUGUSTUS mRNA 651503 655174 1 + . ID=LTnewLM_200020000.1;Parent=LTnewLM_200020000 LTnewLM_20 AUGUSTUS CDS 651503 655174 1 + 0 ID=LTnewLM_200020000.1:CDS:1;Parent=LTnewLM_200020000.1 ### LTnewLM_20 . polypeptide 651503 655174 . + . ID=LTnewLM_200020000.1:pep;Derives_from=LTnewLM_200020000.1;orthologous_to=LmjF.20.1420_mRNA;ortholog_cluster=OG0002033;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 657685 658707 1 + . ID=LTnewLM_200020100 LTnewLM_20 AUGUSTUS mRNA 657685 658707 1 + . ID=LTnewLM_200020100.1;Parent=LTnewLM_200020100 LTnewLM_20 AUGUSTUS CDS 657685 658707 1 + 0 ID=LTnewLM_200020100.1:CDS:1;Parent=LTnewLM_200020100.1 ### LTnewLM_20 . polypeptide 657685 658707 . + . ID=LTnewLM_200020100.1:pep;Derives_from=LTnewLM_200020100.1;orthologous_to=LmjF.20.1430_mRNA;ortholog_cluster=OG0002034;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 660084 660521 1 + . ID=LTnewLM_200020200 LTnewLM_20 AUGUSTUS mRNA 660084 660521 1 + . ID=LTnewLM_200020200.1;Parent=LTnewLM_200020200 LTnewLM_20 AUGUSTUS CDS 660084 660521 1 + 0 ID=LTnewLM_200020200.1:CDS:1;Parent=LTnewLM_200020200.1 ### LTnewLM_20 . polypeptide 660084 660521 . + . ID=LTnewLM_200020200.1:pep;Derives_from=LTnewLM_200020200.1;orthologous_to=LmjF.20.1440_mRNA;ortholog_cluster=OG0002035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 661561 662739 1 + . ID=LTnewLM_200020300 LTnewLM_20 AUGUSTUS mRNA 661561 662739 1 + . ID=LTnewLM_200020300.1;Parent=LTnewLM_200020300 LTnewLM_20 AUGUSTUS CDS 661561 662739 1 + 0 ID=LTnewLM_200020300.1:CDS:1;Parent=LTnewLM_200020300.1 ### LTnewLM_20 . polypeptide 661561 662739 . + . ID=LTnewLM_200020300.1:pep;Derives_from=LTnewLM_200020300.1;orthologous_to=LmjF.20.1450_mRNA;ortholog_cluster=OG0002036;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 664234 664962 1 - . ID=LTnewLM_200020400 LTnewLM_20 AUGUSTUS mRNA 664234 664962 1 - . ID=LTnewLM_200020400.1;Parent=LTnewLM_200020400 LTnewLM_20 AUGUSTUS CDS 664234 664962 1 - 0 ID=LTnewLM_200020400.1:CDS:1;Parent=LTnewLM_200020400.1 ### LTnewLM_20 . polypeptide 664234 664962 . - . ID=LTnewLM_200020400.1:pep;Derives_from=LTnewLM_200020400.1;orthologous_to=LmjF.20.1460_mRNA;ortholog_cluster=OG0002037;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 665480 667204 1 - . ID=LTnewLM_200020500 LTnewLM_20 AUGUSTUS mRNA 665480 667204 1 - . ID=LTnewLM_200020500.1;Parent=LTnewLM_200020500 LTnewLM_20 AUGUSTUS CDS 665480 667204 1 - 0 ID=LTnewLM_200020500.1:CDS:1;Parent=LTnewLM_200020500.1 ### LTnewLM_20 . polypeptide 665480 667204 . - . ID=LTnewLM_200020500.1:pep;Derives_from=LTnewLM_200020500.1;orthologous_to=LmjF.20.1470_mRNA;ortholog_cluster=OG0002038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 668501 668803 1 - . ID=LTnewLM_200020600 LTnewLM_20 AUGUSTUS mRNA 668501 668803 1 - . ID=LTnewLM_200020600.1;Parent=LTnewLM_200020600 LTnewLM_20 AUGUSTUS CDS 668501 668803 1 - 0 ID=LTnewLM_200020600.1:CDS:1;Parent=LTnewLM_200020600.1 ### LTnewLM_20 . polypeptide 668501 668803 . - . ID=LTnewLM_200020600.1:pep;Derives_from=LTnewLM_200020600.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 669592 672555 1 - . ID=LTnewLM_200020700 LTnewLM_20 AUGUSTUS mRNA 669592 672555 1 - . ID=LTnewLM_200020700.1;Parent=LTnewLM_200020700 LTnewLM_20 AUGUSTUS CDS 669592 672555 1 - 0 ID=LTnewLM_200020700.1:CDS:1;Parent=LTnewLM_200020700.1 ### LTnewLM_20 . polypeptide 669592 672555 . - . ID=LTnewLM_200020700.1:pep;Derives_from=LTnewLM_200020700.1;orthologous_to=LmjF.20.1480_mRNA;ortholog_cluster=OG0002039;product=term%3DMyotubularin-like phosphatase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06602 LTnewLM_20 Pfam protein_match 670225 671823 . - . Parent=LTnewLM_200020700.1:pep;Name=PF06602;signature_desc=Myotubularin-like phosphatase domain ### LTnewLM_20 AUGUSTUS gene 673508 676405 1 - . ID=LTnewLM_200020800 LTnewLM_20 AUGUSTUS mRNA 673508 676405 1 - . ID=LTnewLM_200020800.1;Parent=LTnewLM_200020800 LTnewLM_20 AUGUSTUS CDS 673508 676405 1 - 0 ID=LTnewLM_200020800.1:CDS:1;Parent=LTnewLM_200020800.1 ### LTnewLM_20 . polypeptide 673508 676405 . - . ID=LTnewLM_200020800.1:pep;Derives_from=LTnewLM_200020800.1;orthologous_to=LmjF.20.1490_mRNA;ortholog_cluster=OG0002040;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 677024 679882 1 - . ID=LTnewLM_200020900 LTnewLM_20 AUGUSTUS mRNA 677024 679882 1 - . ID=LTnewLM_200020900.1;Parent=LTnewLM_200020900 LTnewLM_20 AUGUSTUS CDS 677024 679882 1 - 0 ID=LTnewLM_200020900.1:CDS:1;Parent=LTnewLM_200020900.1 ### LTnewLM_20 . polypeptide 677024 679882 . - . ID=LTnewLM_200020900.1:pep;Derives_from=LTnewLM_200020900.1;orthologous_to=LmjF.20.1500_mRNA;ortholog_cluster=OG0002041;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 680643 686986 0.94 - . ID=LTnewLM_200021000 LTnewLM_20 AUGUSTUS mRNA 680643 686986 0.94 - . ID=LTnewLM_200021000.1;Parent=LTnewLM_200021000 LTnewLM_20 AUGUSTUS CDS 680643 682661 0.94 - 0 ID=LTnewLM_200021000.1:CDS:1;Parent=LTnewLM_200021000.1 LTnewLM_20 AUGUSTUS CDS 682718 686986 1 - 0 ID=LTnewLM_200021000.1:CDS:2;Parent=LTnewLM_200021000.1 ### LTnewLM_20 . polypeptide 680643 686986 . - . ID=LTnewLM_200021000.1:pep;Derives_from=LTnewLM_200021000.1;orthologous_to=LmjF.20.1510_mRNA;ortholog_cluster=OG0002042;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 688173 693167 1 - . ID=LTnewLM_200021100 LTnewLM_20 AUGUSTUS mRNA 688173 693167 1 - . ID=LTnewLM_200021100.1;Parent=LTnewLM_200021100 LTnewLM_20 AUGUSTUS CDS 688173 693167 1 - 0 ID=LTnewLM_200021100.1:CDS:1;Parent=LTnewLM_200021100.1 ### LTnewLM_20 . polypeptide 688173 693167 . - . ID=LTnewLM_200021100.1:pep;Derives_from=LTnewLM_200021100.1;orthologous_to=LmjF.20.1520_mRNA;ortholog_cluster=OG0002043;product=term%3DDomain of unknown function (DUF4456)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14644 LTnewLM_20 Pfam protein_match 688872 689420 . - . Parent=LTnewLM_200021100.1:pep;Name=PF14644;signature_desc=Domain of unknown function (DUF4456) ### LTnewLM_20 AUGUSTUS gene 693711 696158 1 - . ID=LTnewLM_200021200 LTnewLM_20 AUGUSTUS mRNA 693711 696158 1 - . ID=LTnewLM_200021200.1;Parent=LTnewLM_200021200 LTnewLM_20 AUGUSTUS CDS 693711 696158 1 - 0 ID=LTnewLM_200021200.1:CDS:1;Parent=LTnewLM_200021200.1 ### LTnewLM_20 . polypeptide 693711 696158 . - . ID=LTnewLM_200021200.1:pep;Derives_from=LTnewLM_200021200.1;orthologous_to=LmjF.20.1530_mRNA;ortholog_cluster=OG0002044;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_20 Pfam protein_match 694143 694562 . - . Parent=LTnewLM_200021200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_20 AUGUSTUS gene 696746 697382 0.51 - . ID=LTnewLM_200021300 LTnewLM_20 AUGUSTUS mRNA 696746 697382 0.51 - . ID=LTnewLM_200021300.1;Parent=LTnewLM_200021300 LTnewLM_20 AUGUSTUS CDS 696746 696930 0.51 - 2 ID=LTnewLM_200021300.1:CDS:1;Parent=LTnewLM_200021300.1 LTnewLM_20 AUGUSTUS CDS 697253 697382 0.71 - 0 ID=LTnewLM_200021300.1:CDS:2;Parent=LTnewLM_200021300.1 ### LTnewLM_20 . polypeptide 696746 697382 . - . ID=LTnewLM_200021300.1:pep;Derives_from=LTnewLM_200021300.1;orthologous_to=LTnewLM_200022600.1,LmjF.20.1540_mRNA,LmjF.20.1750_mRNA;ortholog_cluster=OG0000148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 699206 701032 1 - . ID=LTnewLM_200021400 LTnewLM_20 AUGUSTUS mRNA 699206 701032 1 - . ID=LTnewLM_200021400.1;Parent=LTnewLM_200021400 LTnewLM_20 AUGUSTUS CDS 699206 701032 1 - 0 ID=LTnewLM_200021400.1:CDS:1;Parent=LTnewLM_200021400.1 ### LTnewLM_20 . polypeptide 699206 701032 . - . ID=LTnewLM_200021400.1:pep;Derives_from=LTnewLM_200021400.1;orthologous_to=LmjF.20.1630_mRNA;ortholog_cluster=OG0002045;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_20 Pfam protein_match 699674 700195 . - . Parent=LTnewLM_200021400.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_20 AUGUSTUS gene 701892 702533 1 - . ID=LTnewLM_200021500 LTnewLM_20 AUGUSTUS mRNA 701892 702533 1 - . ID=LTnewLM_200021500.1;Parent=LTnewLM_200021500 LTnewLM_20 AUGUSTUS CDS 701892 702533 1 - 0 ID=LTnewLM_200021500.1:CDS:1;Parent=LTnewLM_200021500.1 ### LTnewLM_20 . polypeptide 701892 702533 . - . ID=LTnewLM_200021500.1:pep;Derives_from=LTnewLM_200021500.1;orthologous_to=LmjF.20.1640_mRNA;ortholog_cluster=OG0002046;product=term%3DCS domain/SGS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04969|Pfam:PF05002 LTnewLM_20 Pfam protein_match 701907 702134 . - . Parent=LTnewLM_200021500.1:pep;Name=PF05002;signature_desc=SGS domain LTnewLM_20 Pfam protein_match 702273 702506 . - . Parent=LTnewLM_200021500.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_20 AUGUSTUS gene 703944 704465 1 - . ID=LTnewLM_200021600 LTnewLM_20 AUGUSTUS mRNA 703944 704465 1 - . ID=LTnewLM_200021600.1;Parent=LTnewLM_200021600 LTnewLM_20 AUGUSTUS CDS 703944 704465 1 - 0 ID=LTnewLM_200021600.1:CDS:1;Parent=LTnewLM_200021600.1 ### LTnewLM_20 . polypeptide 703944 704465 . - . ID=LTnewLM_200021600.1:pep;Derives_from=LTnewLM_200021600.1;orthologous_to=LTnewLM_210024000.1,LmjF.20.1650_mRNA,LmjF.21.1550_mRNA;ortholog_cluster=OG0000149;product=term%3DRibosomal_S17 N-terminal/Ribosomal protein S17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16205|Pfam:PF00366;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_20 Pfam protein_match 704001 704204 . - . Parent=LTnewLM_200021600.1:pep;Name=PF00366;signature_desc=Ribosomal protein S17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_20 Pfam protein_match 704211 704414 . - . Parent=LTnewLM_200021600.1:pep;Name=PF16205;signature_desc=Ribosomal_S17 N-terminal ### LTnewLM_20 AUGUSTUS gene 705232 706443 1 - . ID=LTnewLM_200021700 LTnewLM_20 AUGUSTUS mRNA 705232 706443 1 - . ID=LTnewLM_200021700.1;Parent=LTnewLM_200021700 LTnewLM_20 AUGUSTUS CDS 705232 706443 1 - 0 ID=LTnewLM_200021700.1:CDS:1;Parent=LTnewLM_200021700.1 ### LTnewLM_20 . polypeptide 705232 706443 . - . ID=LTnewLM_200021700.1:pep;Derives_from=LTnewLM_200021700.1;orthologous_to=LmjF.20.1660_mRNA;ortholog_cluster=OG0002047;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 707340 708290 1 - . ID=LTnewLM_200021800 LTnewLM_20 AUGUSTUS mRNA 707340 708290 1 - . ID=LTnewLM_200021800.1;Parent=LTnewLM_200021800 LTnewLM_20 AUGUSTUS CDS 707340 708290 1 - 0 ID=LTnewLM_200021800.1:CDS:1;Parent=LTnewLM_200021800.1 ### LTnewLM_20 . polypeptide 707340 708290 . - . ID=LTnewLM_200021800.1:pep;Derives_from=LTnewLM_200021800.1;orthologous_to=LmjF.20.1670_mRNA;ortholog_cluster=OG0002048;product=term%3DBrix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04427 LTnewLM_20 Pfam protein_match 707547 708071 . - . Parent=LTnewLM_200021800.1:pep;Name=PF04427;signature_desc=Brix domain ### LTnewLM_20 AUGUSTUS gene 709165 713004 1 - . ID=LTnewLM_200021900 LTnewLM_20 AUGUSTUS mRNA 709165 713004 1 - . ID=LTnewLM_200021900.1;Parent=LTnewLM_200021900 LTnewLM_20 AUGUSTUS CDS 709165 713004 1 - 0 ID=LTnewLM_200021900.1:CDS:1;Parent=LTnewLM_200021900.1 ### LTnewLM_20 . polypeptide 709165 713004 . - . ID=LTnewLM_200021900.1:pep;Derives_from=LTnewLM_200021900.1;orthologous_to=LmjF.20.1680_mRNA;ortholog_cluster=OG0002049;product=term%3DPeptidase family C50%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03568;Ontology_term=GO:0005634,GO:0008233,GO:0006508 LTnewLM_20 Pfam protein_match 709366 709977 . - . Parent=LTnewLM_200021900.1:pep;Name=PF03568;signature_desc=Peptidase family C50;Ontology_term=GO:0008233,GO:0006508,GO:0005634 ### LTnewLM_20 AUGUSTUS gene 714223 715071 1 - . ID=LTnewLM_200022000 LTnewLM_20 AUGUSTUS mRNA 714223 715071 1 - . ID=LTnewLM_200022000.1;Parent=LTnewLM_200022000 LTnewLM_20 AUGUSTUS CDS 714223 715071 1 - 0 ID=LTnewLM_200022000.1:CDS:1;Parent=LTnewLM_200022000.1 ### LTnewLM_20 . polypeptide 714223 715071 . - . ID=LTnewLM_200022000.1:pep;Derives_from=LTnewLM_200022000.1;orthologous_to=LmjF.20.1690_mRNA;ortholog_cluster=OG0002050;product=term%3DSoluble NSF attachment protein%2C SNAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14938 LTnewLM_20 Pfam protein_match 714238 715065 . - . Parent=LTnewLM_200022000.1:pep;Name=PF14938;signature_desc=Soluble NSF attachment protein%2C SNAP ### LTnewLM_20 AUGUSTUS gene 716004 716828 1 - . ID=LTnewLM_200022100 LTnewLM_20 AUGUSTUS mRNA 716004 716828 1 - . ID=LTnewLM_200022100.1;Parent=LTnewLM_200022100 LTnewLM_20 AUGUSTUS CDS 716004 716828 1 - 0 ID=LTnewLM_200022100.1:CDS:1;Parent=LTnewLM_200022100.1 ### LTnewLM_20 . polypeptide 716004 716828 . - . ID=LTnewLM_200022100.1:pep;Derives_from=LTnewLM_200022100.1;orthologous_to=LmjF.20.1700_mRNA;ortholog_cluster=OG0002051;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 717432 719243 1 - . ID=LTnewLM_200022200 LTnewLM_20 AUGUSTUS mRNA 717432 719243 1 - . ID=LTnewLM_200022200.1;Parent=LTnewLM_200022200 LTnewLM_20 AUGUSTUS CDS 717432 719243 1 - 0 ID=LTnewLM_200022200.1:CDS:1;Parent=LTnewLM_200022200.1 ### LTnewLM_20 . polypeptide 717432 719243 . - . ID=LTnewLM_200022200.1:pep;Derives_from=LTnewLM_200022200.1;orthologous_to=LmjF.20.1710_mRNA;ortholog_cluster=OG0002052;product=term%3DtRNA (Uracil-5-)-methyltransferase/Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)/ubiE/COQ5 methyltransferase family/Methyltransferase domain/Conserved hypothetical protein 95%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05958|Pfam:PF01135|Pfam:PF01209|Pfam:PF13847|Pfam:PF03602|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008173,GO:0006396,GO:0006464,GO:0004719,GO:0031167,GO:0008168 LTnewLM_20 Pfam protein_match 717564 718127 . - . Parent=LTnewLM_200022200.1:pep;Name=PF05958;signature_desc=tRNA (Uracil-5-)-methyltransferase;Ontology_term=GO:0008173,GO:0006396 LTnewLM_20 Pfam protein_match 717654 718040 . - . Parent=LTnewLM_200022200.1:pep;Name=PF03602;signature_desc=Conserved hypothetical protein 95;Ontology_term=GO:0008168,GO:0031167 LTnewLM_20 Pfam protein_match 717849 718043 . - . Parent=LTnewLM_200022200.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_20 Pfam protein_match 717855 718025 . - . Parent=LTnewLM_200022200.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_20 Pfam protein_match 717858 718025 . - . Parent=LTnewLM_200022200.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_20 Pfam protein_match 717861 718064 . - . Parent=LTnewLM_200022200.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_20 Pfam protein_match 717876 718091 . - . Parent=LTnewLM_200022200.1:pep;Name=PF01135;signature_desc=Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);Ontology_term=GO:0004719,GO:0006464 ### LTnewLM_20 AUGUSTUS gene 719959 720885 1 - . ID=LTnewLM_200022300 LTnewLM_20 AUGUSTUS mRNA 719959 720885 1 - . ID=LTnewLM_200022300.1;Parent=LTnewLM_200022300 LTnewLM_20 AUGUSTUS CDS 719959 720885 1 - 0 ID=LTnewLM_200022300.1:CDS:1;Parent=LTnewLM_200022300.1 ### LTnewLM_20 . polypeptide 719959 720885 . - . ID=LTnewLM_200022300.1:pep;Derives_from=LTnewLM_200022300.1;orthologous_to=LmjF.20.1720_mRNA;ortholog_cluster=OG0002053;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 721905 723161 1 - . ID=LTnewLM_200022400 LTnewLM_20 AUGUSTUS mRNA 721905 723161 1 - . ID=LTnewLM_200022400.1;Parent=LTnewLM_200022400 LTnewLM_20 AUGUSTUS CDS 721905 723161 1 - 0 ID=LTnewLM_200022400.1:CDS:1;Parent=LTnewLM_200022400.1 ### LTnewLM_20 . polypeptide 721905 723161 . - . ID=LTnewLM_200022400.1:pep;Derives_from=LTnewLM_200022400.1;orthologous_to=LmjF.20.1730_mRNA;ortholog_cluster=OG0002054;product=term%3DRNA ligase/T4 RNA ligase 2 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09414|Pfam:PF18043 LTnewLM_20 Pfam protein_match 722031 722210 . - . Parent=LTnewLM_200022400.1:pep;Name=PF18043;signature_desc=T4 RNA ligase 2 C-terminal LTnewLM_20 Pfam protein_match 722355 723011 . - . Parent=LTnewLM_200022400.1:pep;Name=PF09414;signature_desc=RNA ligase ### LTnewLM_20 . polypeptide 723884 724786 . - . ID=LTnewLM_200022500.1:pep;Derives_from=LTnewLM_200022500.1;orthologous_to=LTnewLM_200022500.2,LmjF.20.1740.1_mRNA,LmjF.20.1740.2_mRNA;ortholog_cluster=OG0000285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . polypeptide 723884 725257 . - . ID=LTnewLM_200022500.2:pep;Derives_from=LTnewLM_200022500.2;orthologous_to=LTnewLM_200022500.1,LmjF.20.1740.1_mRNA,LmjF.20.1740.2_mRNA;ortholog_cluster=OG0000285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 . pseudogene 723884 725795 . - . ID=LTnewLM_200022500:pseudogene;coverage=0.979;sequence_ID=0.903;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.20.1740_0;has_internal_stop=true LTnewLM_20 . pseudogenic_transcript 723884 724947 . - . ID=LTnewLM_200022500.1;Parent=LTnewLM_200022500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 723884 724786 . - . ID=LTnewLM_200022500.1:pseudogenic_exon:1;Parent=LTnewLM_200022500.1;extra_copy_number=0 LTnewLM_20 . pseudogenic_transcript 723884 725795 . - . ID=LTnewLM_200022500.2;Parent=LTnewLM_200022500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_20 . pseudogenic_exon 723884 725257 . - . ID=LTnewLM_200022500.2:pseudogenic_exon:1;Parent=LTnewLM_200022500.2;extra_copy_number=0 ### LTnewLM_20 AUGUSTUS gene 726990 727554 0.4 - . ID=LTnewLM_200022600 LTnewLM_20 AUGUSTUS mRNA 726990 727554 0.4 - . ID=LTnewLM_200022600.1;Parent=LTnewLM_200022600 LTnewLM_20 AUGUSTUS CDS 726990 727102 0.4 - 2 ID=LTnewLM_200022600.1:CDS:1;Parent=LTnewLM_200022600.1 LTnewLM_20 AUGUSTUS CDS 727425 727554 0.58 - 0 ID=LTnewLM_200022600.1:CDS:2;Parent=LTnewLM_200022600.1 ### LTnewLM_20 . polypeptide 726990 727554 . - . ID=LTnewLM_200022600.1:pep;Derives_from=LTnewLM_200022600.1;orthologous_to=LTnewLM_200021300.1,LmjF.20.1540_mRNA,LmjF.20.1750_mRNA;ortholog_cluster=OG0000148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 727821 728078 1 - . ID=LTnewLM_200022700 LTnewLM_20 AUGUSTUS mRNA 727821 728078 1 - . ID=LTnewLM_200022700.1;Parent=LTnewLM_200022700 LTnewLM_20 AUGUSTUS CDS 727821 728078 1 - 0 ID=LTnewLM_200022700.1:CDS:1;Parent=LTnewLM_200022700.1 ### LTnewLM_20 . polypeptide 727821 728078 . - . ID=LTnewLM_200022700.1:pep;Derives_from=LTnewLM_200022700.1;product=term%3Dhypothetical protein ### LTnewLM_20 AUGUSTUS gene 728948 730153 1 - . ID=LTnewLM_200022800 LTnewLM_20 AUGUSTUS mRNA 728948 730153 1 - . ID=LTnewLM_200022800.1;Parent=LTnewLM_200022800 LTnewLM_20 AUGUSTUS CDS 728948 730153 1 - 0 ID=LTnewLM_200022800.1:CDS:1;Parent=LTnewLM_200022800.1 ### LTnewLM_20 . polypeptide 728948 730153 . - . ID=LTnewLM_200022800.1:pep;Derives_from=LTnewLM_200022800.1;orthologous_to=LmjF.20.1550_mRNA;ortholog_cluster=OG0002055;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 729005 729931 . - . Parent=LTnewLM_200022800.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 729311 729589 . - . Parent=LTnewLM_200022800.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_20 AUGUSTUS gene 731247 732434 1 - . ID=LTnewLM_200022900 LTnewLM_20 AUGUSTUS mRNA 731247 732434 1 - . ID=LTnewLM_200022900.1;Parent=LTnewLM_200022900 LTnewLM_20 AUGUSTUS CDS 731247 732434 1 - 0 ID=LTnewLM_200022900.1:CDS:1;Parent=LTnewLM_200022900.1 ### LTnewLM_20 . polypeptide 731247 732434 . - . ID=LTnewLM_200022900.1:pep;Derives_from=LTnewLM_200022900.1;orthologous_to=LTnewLM_200023000.1,LTnewLM_200023100.1,LmjF.20.1560_mRNA,LmjF.20.1570_mRNA;ortholog_cluster=OG0000086;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 731271 732212 . - . Parent=LTnewLM_200022900.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 731592 731870 . - . Parent=LTnewLM_200022900.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_20 AUGUSTUS gene 733516 734705 0.73 - . ID=LTnewLM_200023000 LTnewLM_20 AUGUSTUS mRNA 733516 734705 0.73 - . ID=LTnewLM_200023000.1;Parent=LTnewLM_200023000 LTnewLM_20 AUGUSTUS CDS 733516 734195 0.74 - 2 ID=LTnewLM_200023000.1:CDS:1;Parent=LTnewLM_200023000.1 LTnewLM_20 AUGUSTUS CDS 734246 734705 0.73 - 0 ID=LTnewLM_200023000.1:CDS:2;Parent=LTnewLM_200023000.1 ### LTnewLM_20 . polypeptide 733516 734705 . - . ID=LTnewLM_200023000.1:pep;Derives_from=LTnewLM_200023000.1;orthologous_to=LTnewLM_200022900.1,LTnewLM_200023100.1,LmjF.20.1560_mRNA,LmjF.20.1570_mRNA;ortholog_cluster=OG0000086;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 733590 734480 . - . Parent=LTnewLM_200023000.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 733911 734189 . - . Parent=LTnewLM_200023000.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_20 AUGUSTUS gene 736535 737719 1 - . ID=LTnewLM_200023100 LTnewLM_20 AUGUSTUS mRNA 736535 737719 1 - . ID=LTnewLM_200023100.1;Parent=LTnewLM_200023100 LTnewLM_20 AUGUSTUS CDS 736535 737719 1 - 0 ID=LTnewLM_200023100.1:CDS:1;Parent=LTnewLM_200023100.1 ### LTnewLM_20 . polypeptide 736535 737719 . - . ID=LTnewLM_200023100.1:pep;Derives_from=LTnewLM_200023100.1;orthologous_to=LTnewLM_200022900.1,LTnewLM_200023000.1,LmjF.20.1560_mRNA,LmjF.20.1570_mRNA;ortholog_cluster=OG0000086;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 736559 737497 . - . Parent=LTnewLM_200023100.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_20 Pfam protein_match 736877 737155 . - . Parent=LTnewLM_200023100.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_20 AUGUSTUS gene 738434 741490 1 - . ID=LTnewLM_200023200 LTnewLM_20 AUGUSTUS mRNA 738434 741490 1 - . ID=LTnewLM_200023200.1;Parent=LTnewLM_200023200 LTnewLM_20 AUGUSTUS CDS 738434 741490 1 - 0 ID=LTnewLM_200023200.1:CDS:1;Parent=LTnewLM_200023200.1 ### LTnewLM_20 . polypeptide 738434 741490 . - . ID=LTnewLM_200023200.1:pep;Derives_from=LTnewLM_200023200.1;orthologous_to=LmjF.20.1580_mRNA;ortholog_cluster=OG0002056;product=term%3DPentatricopeptide repeat domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13812 LTnewLM_20 Pfam protein_match 740549 740710 . - . Parent=LTnewLM_200023200.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain ### LTnewLM_20 AUGUSTUS gene 742049 742414 1 - . ID=LTnewLM_200023300 LTnewLM_20 AUGUSTUS mRNA 742049 742414 1 - . ID=LTnewLM_200023300.1;Parent=LTnewLM_200023300 LTnewLM_20 AUGUSTUS CDS 742049 742414 1 - 0 ID=LTnewLM_200023300.1:CDS:1;Parent=LTnewLM_200023300.1 ### LTnewLM_20 . polypeptide 742049 742414 . - . ID=LTnewLM_200023300.1:pep;Derives_from=LTnewLM_200023300.1;orthologous_to=LmjF.20.1590_mRNA;ortholog_cluster=OG0002057;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 742894 745914 1 - . ID=LTnewLM_200023400 LTnewLM_20 AUGUSTUS mRNA 742894 745914 1 - . ID=LTnewLM_200023400.1;Parent=LTnewLM_200023400 LTnewLM_20 AUGUSTUS CDS 742894 745914 1 - 0 ID=LTnewLM_200023400.1:CDS:1;Parent=LTnewLM_200023400.1 ### LTnewLM_20 . polypeptide 742894 745914 . - . ID=LTnewLM_200023400.1:pep;Derives_from=LTnewLM_200023400.1;orthologous_to=LmjF.20.1600_mRNA;ortholog_cluster=OG0002058;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 746708 747392 0.5 - . ID=LTnewLM_200023500 LTnewLM_20 AUGUSTUS mRNA 746708 747392 0.5 - . ID=LTnewLM_200023500.1;Parent=LTnewLM_200023500 LTnewLM_20 AUGUSTUS CDS 746708 746883 0.5 - 2 ID=LTnewLM_200023500.1:CDS:1;Parent=LTnewLM_200023500.1 LTnewLM_20 AUGUSTUS CDS 746945 747392 0.62 - 0 ID=LTnewLM_200023500.1:CDS:2;Parent=LTnewLM_200023500.1 ### LTnewLM_20 . polypeptide 746708 747392 . - . ID=LTnewLM_200023500.1:pep;Derives_from=LTnewLM_200023500.1;orthologous_to=LmjF.20.1610_mRNA;ortholog_cluster=OG0002059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 747801 748691 1 - . ID=LTnewLM_200023600 LTnewLM_20 AUGUSTUS mRNA 747801 748691 1 - . ID=LTnewLM_200023600.1;Parent=LTnewLM_200023600 LTnewLM_20 AUGUSTUS CDS 747801 748691 1 - 0 ID=LTnewLM_200023600.1:CDS:1;Parent=LTnewLM_200023600.1 ### LTnewLM_20 . polypeptide 747801 748691 . - . ID=LTnewLM_200023600.1:pep;Derives_from=LTnewLM_200023600.1;orthologous_to=LmjF.20.1620_mRNA;ortholog_cluster=OG0002060;product=term%3DCHORD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04968 LTnewLM_20 Pfam protein_match 747813 747995 . - . Parent=LTnewLM_200023600.1:pep;Name=PF04968;signature_desc=CHORD LTnewLM_20 Pfam protein_match 748191 748373 . - . Parent=LTnewLM_200023600.1:pep;Name=PF04968;signature_desc=CHORD ### LTnewLM_20 . polypeptide 750913 751625 . - . ID=LTnewLM_200023700.1:pep;Derives_from=LTnewLM_200023700.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_20 AUGUSTUS gene 750913 760567 0.6 - . ID=LTnewLM_200023700;fiveEndPartial=true;End_range=.,. LTnewLM_20 AUGUSTUS mRNA 750913 760567 0.6 - . ID=LTnewLM_200023700.1;Parent=LTnewLM_200023700 LTnewLM_20 AUGUSTUS CDS 750913 751625 0.6 - 2 ID=LTnewLM_200023700.1:CDS:1;Parent=LTnewLM_200023700.1 ### LTnewLM_21 . contig 1 769579 . + . Name=LTnewLM_CTG000021 LTnewLM_21 . pseudogene 4433 6978 . - . ID=LTnewLM_210005000:pseudogene;coverage=0.999;sequence_ID=0.905;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0010_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 4433 6978 . - . ID=LTnewLM_210005000.1;Parent=LTnewLM_210005000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 4433 6978 . - . ID=LTnewLM_210005000.1:pseudogenic_exon:1;Parent=LTnewLM_210005000.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 4433 6978 . - . ID=LTnewLM_210005000.1:pep;Derives_from=LTnewLM_210005000.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 8754 9095 1 - . ID=LTnewLM_210005100 LTnewLM_21 AUGUSTUS mRNA 8754 9095 1 - . ID=LTnewLM_210005100.1;Parent=LTnewLM_210005100 LTnewLM_21 AUGUSTUS CDS 8754 9095 1 - 0 ID=LTnewLM_210005100.1:CDS:1;Parent=LTnewLM_210005100.1 ### LTnewLM_21 . polypeptide 8754 9095 . - . ID=LTnewLM_210005100.1:pep;Derives_from=LTnewLM_210005100.1;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_21 Pfam protein_match 8790 8975 . - . Parent=LTnewLM_210005100.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_21 Pfam protein_match 8793 8960 . - . Parent=LTnewLM_210005100.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_21 AUGUSTUS gene 10017 11057 1 + . ID=LTnewLM_210005200 LTnewLM_21 AUGUSTUS mRNA 10017 11057 1 + . ID=LTnewLM_210005200.1;Parent=LTnewLM_210005200 LTnewLM_21 AUGUSTUS CDS 10017 11057 1 + 0 ID=LTnewLM_210005200.1:CDS:1;Parent=LTnewLM_210005200.1 ### LTnewLM_21 . polypeptide 10017 11057 . + . ID=LTnewLM_210005200.1:pep;Derives_from=LTnewLM_210005200.1;orthologous_to=LmjF.21.0020_mRNA;ortholog_cluster=OG0002061;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489|Pfam:PF13649|Pfam:PF08242 LTnewLM_21 Pfam protein_match 10323 10850 . + . Parent=LTnewLM_210005200.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_21 Pfam protein_match 10353 10490 . + . Parent=LTnewLM_210005200.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_21 Pfam protein_match 10356 10769 . + . Parent=LTnewLM_210005200.1:pep;Name=PF08242;signature_desc=Methyltransferase domain ### LTnewLM_21 Liftoff gene 11600 11920 . + . ID=LTnewLM_210005300;coverage=1.0;sequence_ID=0.950;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.21.0023_0 LTnewLM_21 Liftoff mRNA 11600 11920 . + . ID=LTnewLM_210005300.1;Parent=LTnewLM_210005300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 11600 11920 . + 0 ID=LTnewLM_210005300.1:CDS:1;Parent=LTnewLM_210005300.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 11600 11920 . + . ID=LTnewLM_210005300.1:pep;Derives_from=LTnewLM_210005300.1;orthologous_to=LmjF.21.0023_mRNA;ortholog_cluster=OG0002062;product=term%3DAnaphase-promoting complex subunit 11 RING-H2 finger/RING-H2 zinc finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12861|Pfam:PF12678;Ontology_term=GO:0005680,GO:0004842,GO:0008270 LTnewLM_21 Pfam protein_match 11663 11896 . + . Parent=LTnewLM_210005300.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_21 Pfam protein_match 11714 11884 . + . Parent=LTnewLM_210005300.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 ### LTnewLM_21 . pseudogene 12380 13150 . + . ID=LTnewLM_210005400:pseudogene;coverage=1.0;sequence_ID=0.911;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.0027_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 12380 13150 . + . ID=LTnewLM_210005400.1;Parent=LTnewLM_210005400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 12380 13150 . + . ID=LTnewLM_210005400.1:pseudogenic_exon:1;Parent=LTnewLM_210005400.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 12380 13150 . + . ID=LTnewLM_210005400.1:pep;Derives_from=LTnewLM_210005400.1;orthologous_to=LmjF.21.0027_mRNA;ortholog_cluster=OG0007501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 Liftoff gene 13491 14303 . + . ID=LTnewLM_210005500;coverage=0.998;sequence_ID=0.933;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.21.0030_0 LTnewLM_21 Liftoff mRNA 13491 14303 . + . ID=LTnewLM_210005500.1;Parent=LTnewLM_210005500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 13491 13607 . + . ID=LTnewLM_210005500:five_prime_UTR;Parent=LTnewLM_210005500.1;extra_copy_number=0 LTnewLM_21 Liftoff CDS 13608 14303 . + 0 ID=LTnewLM_210005500.1:CDS:1;Parent=LTnewLM_210005500.1;extra_copy_number=0 LTnewLM_21 Liftoff mRNA 13731 14303 . + . ID=LTnewLM_210005500.2;Parent=LTnewLM_210005500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 13731 13778 . + . ID=LTnewLM_210005500:five_prime_UTR.1;Parent=LTnewLM_210005500.2;extra_copy_number=0 LTnewLM_21 Liftoff CDS 13779 14303 . + 0 ID=LTnewLM_210005500.2:CDS:1;Parent=LTnewLM_210005500.2;extra_copy_number=0 ### LTnewLM_21 . polypeptide 13608 14303 . + . ID=LTnewLM_210005500.1:pep;Derives_from=LTnewLM_210005500.1;orthologous_to=LmjF.21.0030.2_mRNA;ortholog_cluster=OG0002063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 13779 14303 . + . ID=LTnewLM_210005500.2:pep;Derives_from=LTnewLM_210005500.2;orthologous_to=LmjF.21.0030.1_mRNA;ortholog_cluster=OG0002064;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 15769 16506 1 + . ID=LTnewLM_210005600 LTnewLM_21 AUGUSTUS mRNA 15769 16506 1 + . ID=LTnewLM_210005600.1;Parent=LTnewLM_210005600 LTnewLM_21 AUGUSTUS CDS 15769 16506 1 + 0 ID=LTnewLM_210005600.1:CDS:1;Parent=LTnewLM_210005600.1 ### LTnewLM_21 . polypeptide 15769 16506 . + . ID=LTnewLM_210005600.1:pep;Derives_from=LTnewLM_210005600.1;orthologous_to=LmjF.21.0040_mRNA;ortholog_cluster=OG0002065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 17776 18477 1 + . ID=LTnewLM_210005700 LTnewLM_21 AUGUSTUS mRNA 17776 18477 1 + . ID=LTnewLM_210005700.1;Parent=LTnewLM_210005700 LTnewLM_21 AUGUSTUS CDS 17776 18477 1 + 0 ID=LTnewLM_210005700.1:CDS:1;Parent=LTnewLM_210005700.1 ### LTnewLM_21 . polypeptide 17776 18477 . + . ID=LTnewLM_210005700.1:pep;Derives_from=LTnewLM_210005700.1;orthologous_to=LmjF.21.0050_mRNA;ortholog_cluster=OG0002066;product=term%3DSNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05739;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 18307 18459 . + . Parent=LTnewLM_210005700.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 19068 20549 1 + . ID=LTnewLM_210005800 LTnewLM_21 AUGUSTUS mRNA 19068 20549 1 + . ID=LTnewLM_210005800.1;Parent=LTnewLM_210005800 LTnewLM_21 AUGUSTUS CDS 19068 20549 1 + 0 ID=LTnewLM_210005800.1:CDS:1;Parent=LTnewLM_210005800.1 ### LTnewLM_21 . polypeptide 19068 20549 . + . ID=LTnewLM_210005800.1:pep;Derives_from=LTnewLM_210005800.1;orthologous_to=LmjF.21.0055_mRNA;ortholog_cluster=OG0002067;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 21174 22448 1 + . ID=LTnewLM_210005900 LTnewLM_21 AUGUSTUS mRNA 21174 22448 1 + . ID=LTnewLM_210005900.1;Parent=LTnewLM_210005900 LTnewLM_21 AUGUSTUS CDS 21174 22448 1 + 0 ID=LTnewLM_210005900.1:CDS:1;Parent=LTnewLM_210005900.1 ### LTnewLM_21 . polypeptide 21174 22448 . + . ID=LTnewLM_210005900.1:pep;Derives_from=LTnewLM_210005900.1;orthologous_to=LmjF.21.0060_mRNA;ortholog_cluster=OG0002068;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 21582 21674 . + . Parent=LTnewLM_210005900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 21696 21800 . + . Parent=LTnewLM_210005900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 22110 22226 . + . Parent=LTnewLM_210005900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_21 Liftoff gene 23251 24353 . + . ID=LTnewLM_210006000;coverage=1.0;sequence_ID=0.942;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.21.0070_0 LTnewLM_21 Liftoff mRNA 23251 24353 . + . ID=LTnewLM_210006000.1;Parent=LTnewLM_210006000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 23251 23297 . + . ID=LTnewLM_210006000:five_prime_UTR;Parent=LTnewLM_210006000.1;extra_copy_number=0 LTnewLM_21 Liftoff CDS 23298 24353 . + 0 ID=LTnewLM_210006000.1:CDS:1;Parent=LTnewLM_210006000.1;extra_copy_number=0 LTnewLM_21 Liftoff mRNA 23561 24353 . + . ID=LTnewLM_210006000.2;Parent=LTnewLM_210006000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 23561 23582 . + . ID=LTnewLM_210006000:five_prime_UTR.1;Parent=LTnewLM_210006000.2;extra_copy_number=0 LTnewLM_21 Liftoff CDS 23583 24353 . + 0 ID=LTnewLM_210006000.2:CDS:1;Parent=LTnewLM_210006000.2;extra_copy_number=0 ### LTnewLM_21 . polypeptide 23298 24353 . + . ID=LTnewLM_210006000.1:pep;Derives_from=LTnewLM_210006000.1;orthologous_to=LTnewLM_210006000.2,LmjF.21.0070.1_mRNA,LmjF.21.0070.2_mRNA;ortholog_cluster=OG0000150;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 23583 24353 . + . ID=LTnewLM_210006000.2:pep;Derives_from=LTnewLM_210006000.2;orthologous_to=LTnewLM_210006000.1,LmjF.21.0070.1_mRNA,LmjF.21.0070.2_mRNA;ortholog_cluster=OG0000150;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 25233 26606 1 + . ID=LTnewLM_210006100 LTnewLM_21 AUGUSTUS mRNA 25233 26606 1 + . ID=LTnewLM_210006100.1;Parent=LTnewLM_210006100 LTnewLM_21 AUGUSTUS CDS 25233 26606 1 + 0 ID=LTnewLM_210006100.1:CDS:1;Parent=LTnewLM_210006100.1 ### LTnewLM_21 . polypeptide 25233 26606 . + . ID=LTnewLM_210006100.1:pep;Derives_from=LTnewLM_210006100.1;orthologous_to=LmjF.21.0080_mRNA;ortholog_cluster=OG0002069;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_21 Pfam protein_match 25287 26354 . + . Parent=LTnewLM_210006100.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_21 AUGUSTUS gene 28642 29193 1 + . ID=LTnewLM_210006200 LTnewLM_21 AUGUSTUS mRNA 28642 29193 1 + . ID=LTnewLM_210006200.1;Parent=LTnewLM_210006200 LTnewLM_21 AUGUSTUS CDS 28642 29193 1 + 0 ID=LTnewLM_210006200.1:CDS:1;Parent=LTnewLM_210006200.1 ### LTnewLM_21 . polypeptide 28642 29193 . + . ID=LTnewLM_210006200.1:pep;Derives_from=LTnewLM_210006200.1;orthologous_to=LmjF.21.0090_mRNA;ortholog_cluster=OG0002070;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 30085 30540 1 + . ID=LTnewLM_210006300 LTnewLM_21 AUGUSTUS mRNA 30085 30540 1 + . ID=LTnewLM_210006300.1;Parent=LTnewLM_210006300 LTnewLM_21 AUGUSTUS CDS 30085 30540 1 + 0 ID=LTnewLM_210006300.1:CDS:1;Parent=LTnewLM_210006300.1 ### LTnewLM_21 . polypeptide 30085 30540 . + . ID=LTnewLM_210006300.1:pep;Derives_from=LTnewLM_210006300.1;orthologous_to=LmjF.21.0100_mRNA;ortholog_cluster=OG0002071;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 31446 32024 1 + . ID=LTnewLM_210006400 LTnewLM_21 AUGUSTUS mRNA 31446 32024 1 + . ID=LTnewLM_210006400.1;Parent=LTnewLM_210006400 LTnewLM_21 AUGUSTUS CDS 31446 32024 1 + 0 ID=LTnewLM_210006400.1:CDS:1;Parent=LTnewLM_210006400.1 ### LTnewLM_21 . polypeptide 31446 32024 . + . ID=LTnewLM_210006400.1:pep;Derives_from=LTnewLM_210006400.1;orthologous_to=LmjF.21.0110_mRNA;ortholog_cluster=OG0002072;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 32762 37642 1 + . ID=LTnewLM_210006500 LTnewLM_21 AUGUSTUS mRNA 32762 37642 1 + . ID=LTnewLM_210006500.1;Parent=LTnewLM_210006500 LTnewLM_21 AUGUSTUS CDS 32762 37642 1 + 0 ID=LTnewLM_210006500.1:CDS:1;Parent=LTnewLM_210006500.1 ### LTnewLM_21 . polypeptide 32762 37642 . + . ID=LTnewLM_210006500.1:pep;Derives_from=LTnewLM_210006500.1;orthologous_to=LmjF.21.0120_mRNA;ortholog_cluster=OG0002073;product=term%3DCalpain family cysteine protease/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648|Pfam:PF01067;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_21 Pfam protein_match 34910 35827 . + . Parent=LTnewLM_210006500.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_21 Pfam protein_match 37190 37582 . + . Parent=LTnewLM_210006500.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III ### LTnewLM_21 AUGUSTUS gene 38998 41427 1 + . ID=LTnewLM_210006600 LTnewLM_21 AUGUSTUS mRNA 38998 41427 1 + . ID=LTnewLM_210006600.1;Parent=LTnewLM_210006600 LTnewLM_21 AUGUSTUS CDS 38998 41427 1 + 0 ID=LTnewLM_210006600.1:CDS:1;Parent=LTnewLM_210006600.1 ### LTnewLM_21 . polypeptide 38998 41427 . + . ID=LTnewLM_210006600.1:pep;Derives_from=LTnewLM_210006600.1;orthologous_to=LmjF.21.0125_mRNA;ortholog_cluster=OG0002074;product=term%3DToprim domain/DNA topoisomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01751|Pfam:PF01131;Ontology_term=GO:0006265,GO:0003916,GO:0003677 LTnewLM_21 Pfam protein_match 39031 39492 . + . Parent=LTnewLM_210006600.1:pep;Name=PF01751;signature_desc=Toprim domain LTnewLM_21 Pfam protein_match 39544 40929 . + . Parent=LTnewLM_210006600.1:pep;Name=PF01131;signature_desc=DNA topoisomerase;Ontology_term=GO:0003677,GO:0003916,GO:0006265 ### LTnewLM_21 AUGUSTUS gene 43566 48698 1 + . ID=LTnewLM_210006700 LTnewLM_21 AUGUSTUS mRNA 43566 48698 1 + . ID=LTnewLM_210006700.1;Parent=LTnewLM_210006700 LTnewLM_21 AUGUSTUS CDS 43566 48698 1 + 0 ID=LTnewLM_210006700.1:CDS:1;Parent=LTnewLM_210006700.1 ### LTnewLM_21 . polypeptide 43566 48698 . + . ID=LTnewLM_210006700.1:pep;Derives_from=LTnewLM_210006700.1;orthologous_to=LmjF.21.0130_mRNA;ortholog_cluster=OG0002075;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 47922 48668 . + . Parent=LTnewLM_210006700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_21 Pfam protein_match 47925 48674 . + . Parent=LTnewLM_210006700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_21 AUGUSTUS gene 49601 49870 0.99 + . ID=LTnewLM_210006800 LTnewLM_21 AUGUSTUS mRNA 49601 49870 0.99 + . ID=LTnewLM_210006800.1;Parent=LTnewLM_210006800 LTnewLM_21 AUGUSTUS CDS 49601 49870 0.99 + 0 ID=LTnewLM_210006800.1:CDS:1;Parent=LTnewLM_210006800.1 ### LTnewLM_21 . polypeptide 49601 49870 . + . ID=LTnewLM_210006800.1:pep;Derives_from=LTnewLM_210006800.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 51969 53891 1 + . ID=LTnewLM_210006900 LTnewLM_21 AUGUSTUS mRNA 51969 53891 1 + . ID=LTnewLM_210006900.1;Parent=LTnewLM_210006900 LTnewLM_21 AUGUSTUS CDS 51969 53891 1 + 0 ID=LTnewLM_210006900.1:CDS:1;Parent=LTnewLM_210006900.1 ### LTnewLM_21 . polypeptide 51969 53891 . + . ID=LTnewLM_210006900.1:pep;Derives_from=LTnewLM_210006900.1;orthologous_to=LmjF.21.0140_mRNA;ortholog_cluster=OG0002076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 54672 55733 1 + . ID=LTnewLM_210007000 LTnewLM_21 AUGUSTUS mRNA 54672 55733 1 + . ID=LTnewLM_210007000.1;Parent=LTnewLM_210007000 LTnewLM_21 AUGUSTUS CDS 54672 55733 1 + 0 ID=LTnewLM_210007000.1:CDS:1;Parent=LTnewLM_210007000.1 ### LTnewLM_21 . polypeptide 54672 55733 . + . ID=LTnewLM_210007000.1:pep;Derives_from=LTnewLM_210007000.1;orthologous_to=LmjF.21.0150_mRNA;ortholog_cluster=OG0002077;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 54849 55544 . + . Parent=LTnewLM_210007000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_21 Pfam protein_match 54915 55718 . + . Parent=LTnewLM_210007000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_21 AUGUSTUS gene 56305 58548 1 + . ID=LTnewLM_210007100 LTnewLM_21 AUGUSTUS mRNA 56305 58548 1 + . ID=LTnewLM_210007100.1;Parent=LTnewLM_210007100 LTnewLM_21 AUGUSTUS CDS 56305 58548 1 + 0 ID=LTnewLM_210007100.1:CDS:1;Parent=LTnewLM_210007100.1 ### LTnewLM_21 . polypeptide 56305 58548 . + . ID=LTnewLM_210007100.1:pep;Derives_from=LTnewLM_210007100.1;orthologous_to=LmjF.21.0160_mRNA;ortholog_cluster=OG0002078;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 59833 62133 1 + . ID=LTnewLM_210007200 LTnewLM_21 AUGUSTUS mRNA 59833 62133 1 + . ID=LTnewLM_210007200.1;Parent=LTnewLM_210007200 LTnewLM_21 AUGUSTUS CDS 59833 62133 1 + 0 ID=LTnewLM_210007200.1:CDS:1;Parent=LTnewLM_210007200.1 ### LTnewLM_21 . polypeptide 59833 62133 . + . ID=LTnewLM_210007200.1:pep;Derives_from=LTnewLM_210007200.1;orthologous_to=LmjF.21.0170_mRNA;ortholog_cluster=OG0002079;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 62725 67152 1 + . ID=LTnewLM_210007300 LTnewLM_21 AUGUSTUS mRNA 62725 67152 1 + . ID=LTnewLM_210007300.1;Parent=LTnewLM_210007300 LTnewLM_21 AUGUSTUS CDS 62725 67152 1 + 0 ID=LTnewLM_210007300.1:CDS:1;Parent=LTnewLM_210007300.1 ### LTnewLM_21 . polypeptide 62725 67152 . + . ID=LTnewLM_210007300.1:pep;Derives_from=LTnewLM_210007300.1;orthologous_to=LmjF.21.0180_mRNA;ortholog_cluster=OG0002080;product=term%3DCHAT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12770 LTnewLM_21 Pfam protein_match 66001 67140 . + . Parent=LTnewLM_210007300.1:pep;Name=PF12770;signature_desc=CHAT domain ### LTnewLM_21 AUGUSTUS gene 68327 70501 1 + . ID=LTnewLM_210007400 LTnewLM_21 AUGUSTUS mRNA 68327 70501 1 + . ID=LTnewLM_210007400.1;Parent=LTnewLM_210007400 LTnewLM_21 AUGUSTUS CDS 68327 70501 1 + 0 ID=LTnewLM_210007400.1:CDS:1;Parent=LTnewLM_210007400.1 ### LTnewLM_21 . polypeptide 68327 70501 . + . ID=LTnewLM_210007400.1:pep;Derives_from=LTnewLM_210007400.1;orthologous_to=LmjF.21.0190_mRNA;ortholog_cluster=OG0002081;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 71363 74242 1 + . ID=LTnewLM_210007500 LTnewLM_21 AUGUSTUS mRNA 71363 74242 1 + . ID=LTnewLM_210007500.1;Parent=LTnewLM_210007500 LTnewLM_21 AUGUSTUS CDS 71363 74242 1 + 0 ID=LTnewLM_210007500.1:CDS:1;Parent=LTnewLM_210007500.1 ### LTnewLM_21 . polypeptide 71363 74242 . + . ID=LTnewLM_210007500.1:pep;Derives_from=LTnewLM_210007500.1;orthologous_to=LmjF.21.0200_mRNA;ortholog_cluster=OG0002082;product=term%3DMajor Vault Protein repeat domain/Major Vault Protein Repeat domain/Shoulder domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01505|Pfam:PF17796|Pfam:PF17795|Pfam:PF11978 LTnewLM_21 Pfam protein_match 71771 71902 . + . Parent=LTnewLM_210007500.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_21 Pfam protein_match 72419 72538 . + . Parent=LTnewLM_210007500.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_21 Pfam protein_match 72575 72736 . + . Parent=LTnewLM_210007500.1:pep;Name=PF17796;signature_desc=Major Vault Protein repeat domain LTnewLM_21 Pfam protein_match 73016 73198 . + . Parent=LTnewLM_210007500.1:pep;Name=PF17795;signature_desc=Major Vault Protein Repeat domain LTnewLM_21 Pfam protein_match 73202 73573 . + . Parent=LTnewLM_210007500.1:pep;Name=PF11978;signature_desc=Shoulder domain ### LTnewLM_21 AUGUSTUS gene 74947 76551 1 + . ID=LTnewLM_210007600 LTnewLM_21 AUGUSTUS mRNA 74947 76551 1 + . ID=LTnewLM_210007600.1;Parent=LTnewLM_210007600 LTnewLM_21 AUGUSTUS CDS 74947 76551 1 + 0 ID=LTnewLM_210007600.1:CDS:1;Parent=LTnewLM_210007600.1 ### LTnewLM_21 . polypeptide 74947 76551 . + . ID=LTnewLM_210007600.1:pep;Derives_from=LTnewLM_210007600.1;orthologous_to=LmjF.21.0210_mRNA;ortholog_cluster=OG0002083;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 77196 77660 1 + . ID=LTnewLM_210007700 LTnewLM_21 AUGUSTUS mRNA 77196 77660 1 + . ID=LTnewLM_210007700.1;Parent=LTnewLM_210007700 LTnewLM_21 AUGUSTUS CDS 77196 77660 1 + 0 ID=LTnewLM_210007700.1:CDS:1;Parent=LTnewLM_210007700.1 ### LTnewLM_21 . polypeptide 77196 77660 . + . ID=LTnewLM_210007700.1:pep;Derives_from=LTnewLM_210007700.1;orthologous_to=LmjF.21.0220_mRNA;ortholog_cluster=OG0002084;product=term%3DEF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833 LTnewLM_21 Pfam protein_match 77484 77627 . + . Parent=LTnewLM_210007700.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_21 AUGUSTUS gene 78300 80072 1 + . ID=LTnewLM_210007800 LTnewLM_21 AUGUSTUS mRNA 78300 80072 1 + . ID=LTnewLM_210007800.1;Parent=LTnewLM_210007800 LTnewLM_21 AUGUSTUS CDS 78300 80072 1 + 0 ID=LTnewLM_210007800.1:CDS:1;Parent=LTnewLM_210007800.1 ### LTnewLM_21 . polypeptide 78300 80072 . + . ID=LTnewLM_210007800.1:pep;Derives_from=LTnewLM_210007800.1;orthologous_to=LmjF.21.0230_mRNA;ortholog_cluster=OG0002085;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_21 Pfam protein_match 78471 79706 . + . Parent=LTnewLM_210007800.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_21 AUGUSTUS gene 80830 82245 1 + . ID=LTnewLM_210007900 LTnewLM_21 AUGUSTUS mRNA 80830 82245 1 + . ID=LTnewLM_210007900.1;Parent=LTnewLM_210007900 LTnewLM_21 AUGUSTUS CDS 80830 82245 1 + 0 ID=LTnewLM_210007900.1:CDS:1;Parent=LTnewLM_210007900.1 ### LTnewLM_21 . polypeptide 80830 82245 . + . ID=LTnewLM_210007900.1:pep;Derives_from=LTnewLM_210007900.1;orthologous_to=LTnewLM_210008000.1,LmjF.21.0240_mRNA,LmjF.21.0250_mRNA;ortholog_cluster=OG0000151;product=term%3DHexokinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00349|Pfam:PF03727;Ontology_term=GO:0005975,GO:0016773,GO:0005524 LTnewLM_21 Pfam protein_match 80923 81492 . + . Parent=LTnewLM_210007900.1:pep;Name=PF00349;signature_desc=Hexokinase;Ontology_term=GO:0005524,GO:0016773,GO:0005975 LTnewLM_21 Pfam protein_match 81520 82221 . + . Parent=LTnewLM_210007900.1:pep;Name=PF03727;signature_desc=Hexokinase;Ontology_term=GO:0005524,GO:0016773,GO:0005975 ### LTnewLM_21 AUGUSTUS gene 84390 85805 1 + . ID=LTnewLM_210008000 LTnewLM_21 AUGUSTUS mRNA 84390 85805 1 + . ID=LTnewLM_210008000.1;Parent=LTnewLM_210008000 LTnewLM_21 AUGUSTUS CDS 84390 85805 1 + 0 ID=LTnewLM_210008000.1:CDS:1;Parent=LTnewLM_210008000.1 ### LTnewLM_21 . polypeptide 84390 85805 . + . ID=LTnewLM_210008000.1:pep;Derives_from=LTnewLM_210008000.1;orthologous_to=LTnewLM_210007900.1,LmjF.21.0240_mRNA,LmjF.21.0250_mRNA;ortholog_cluster=OG0000151;product=term%3DHexokinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00349|Pfam:PF03727;Ontology_term=GO:0005975,GO:0016773,GO:0005524 LTnewLM_21 Pfam protein_match 84483 85052 . + . Parent=LTnewLM_210008000.1:pep;Name=PF00349;signature_desc=Hexokinase;Ontology_term=GO:0005524,GO:0016773,GO:0005975 LTnewLM_21 Pfam protein_match 85080 85781 . + . Parent=LTnewLM_210008000.1:pep;Name=PF03727;signature_desc=Hexokinase;Ontology_term=GO:0005524,GO:0016773,GO:0005975 ### LTnewLM_21 AUGUSTUS gene 88143 90344 1 + . ID=LTnewLM_210008100 LTnewLM_21 AUGUSTUS mRNA 88143 90344 1 + . ID=LTnewLM_210008100.1;Parent=LTnewLM_210008100 LTnewLM_21 AUGUSTUS CDS 88143 90344 1 + 0 ID=LTnewLM_210008100.1:CDS:1;Parent=LTnewLM_210008100.1 ### LTnewLM_21 . polypeptide 88143 90344 . + . ID=LTnewLM_210008100.1:pep;Derives_from=LTnewLM_210008100.1;orthologous_to=LmjF.21.0260_mRNA;ortholog_cluster=OG0002086;product=term%3DPentatricopeptide repeat domain/PPR repeat family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13812|Pfam:PF13041 LTnewLM_21 Pfam protein_match 89865 90008 . + . Parent=LTnewLM_210008100.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_21 Pfam protein_match 89874 90008 . + . Parent=LTnewLM_210008100.1:pep;Name=PF13041;signature_desc=PPR repeat family ### LTnewLM_21 AUGUSTUS gene 91332 94749 1.43 + . ID=LTnewLM_210008200 LTnewLM_21 AUGUSTUS mRNA 91332 94749 0.7 + . ID=LTnewLM_210008200.1;Parent=LTnewLM_210008200 LTnewLM_21 AUGUSTUS CDS 91332 93752 0.76 + 0 ID=LTnewLM_210008200.1:CDS:1;Parent=LTnewLM_210008200.1 LTnewLM_21 AUGUSTUS CDS 93799 94749 0.7 + 0 ID=LTnewLM_210008200.1:CDS:2;Parent=LTnewLM_210008200.1 LTnewLM_21 AUGUSTUS mRNA 92811 94749 0.73 + . ID=LTnewLM_210008200.2;Parent=LTnewLM_210008200 LTnewLM_21 AUGUSTUS CDS 92811 93752 0.74 + 0 ID=LTnewLM_210008200.2:CDS:1;Parent=LTnewLM_210008200.2 LTnewLM_21 AUGUSTUS CDS 93799 94749 0.73 + 0 ID=LTnewLM_210008200.2:CDS:2;Parent=LTnewLM_210008200.2 ### LTnewLM_21 . polypeptide 91332 94749 . + . ID=LTnewLM_210008200.1:pep;Derives_from=LTnewLM_210008200.1;orthologous_to=LTnewLM_210008200.2,LmjF.21.0270_mRNA;ortholog_cluster=OG0000377;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 91371 92579 . + . Parent=LTnewLM_210008200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 91377 91838 . + . Parent=LTnewLM_210008200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_21 . polypeptide 92811 94749 . + . ID=LTnewLM_210008200.2:pep;Derives_from=LTnewLM_210008200.2;orthologous_to=LTnewLM_210008200.1,LmjF.21.0270_mRNA;ortholog_cluster=OG0000377;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 95456 97090 1 + . ID=LTnewLM_210008300 LTnewLM_21 AUGUSTUS mRNA 95456 97090 1 + . ID=LTnewLM_210008300.1;Parent=LTnewLM_210008300 LTnewLM_21 AUGUSTUS CDS 95456 97090 1 + 0 ID=LTnewLM_210008300.1:CDS:1;Parent=LTnewLM_210008300.1 ### LTnewLM_21 . polypeptide 95456 97090 . + . ID=LTnewLM_210008300.1:pep;Derives_from=LTnewLM_210008300.1;orthologous_to=LmjF.21.0280_mRNA;ortholog_cluster=OG0002087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 97666 100977 1 + . ID=LTnewLM_210008400 LTnewLM_21 AUGUSTUS mRNA 97666 100977 1 + . ID=LTnewLM_210008400.1;Parent=LTnewLM_210008400 LTnewLM_21 AUGUSTUS CDS 97666 100977 1 + 0 ID=LTnewLM_210008400.1:CDS:1;Parent=LTnewLM_210008400.1 ### LTnewLM_21 . polypeptide 97666 100977 . + . ID=LTnewLM_210008400.1:pep;Derives_from=LTnewLM_210008400.1;orthologous_to=LmjF.21.0290_mRNA;ortholog_cluster=OG0002088;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 101594 102361 1 + . ID=LTnewLM_210008500 LTnewLM_21 AUGUSTUS mRNA 101594 102361 1 + . ID=LTnewLM_210008500.1;Parent=LTnewLM_210008500 LTnewLM_21 AUGUSTUS CDS 101594 102200 1 + 0 ID=LTnewLM_210008500.1:CDS:1;Parent=LTnewLM_210008500.1 LTnewLM_21 AUGUSTUS CDS 102252 102361 1 + 2 ID=LTnewLM_210008500.1:CDS:2;Parent=LTnewLM_210008500.1 ### LTnewLM_21 . polypeptide 101594 102361 . + . ID=LTnewLM_210008500.1:pep;Derives_from=LTnewLM_210008500.1;orthologous_to=LmjF.21.0300_mRNA;ortholog_cluster=OG0002089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 Liftoff gene 103127 104182 . + . ID=LTnewLM_210008600;coverage=1.0;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.21.0310_0 LTnewLM_21 Liftoff mRNA 103127 104182 . + . ID=LTnewLM_210008600.1;Parent=LTnewLM_210008600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 103127 104182 . + 0 ID=LTnewLM_210008600.1:CDS:1;Parent=LTnewLM_210008600.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 103127 104182 . + . ID=LTnewLM_210008600.1:pep;Derives_from=LTnewLM_210008600.1;orthologous_to=LmjF.21.0310_mRNA;ortholog_cluster=OG0002090;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 104921 105634 1 + . ID=LTnewLM_210008700 LTnewLM_21 AUGUSTUS mRNA 104921 105634 1 + . ID=LTnewLM_210008700.1;Parent=LTnewLM_210008700 LTnewLM_21 AUGUSTUS CDS 104921 105634 1 + 0 ID=LTnewLM_210008700.1:CDS:1;Parent=LTnewLM_210008700.1 ### LTnewLM_21 . polypeptide 104921 105634 . + . ID=LTnewLM_210008700.1:pep;Derives_from=LTnewLM_210008700.1;orthologous_to=LmjF.21.0320_mRNA;ortholog_cluster=OG0002091;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 106714 109854 1 + . ID=LTnewLM_210008800 LTnewLM_21 AUGUSTUS mRNA 106714 109854 1 + . ID=LTnewLM_210008800.1;Parent=LTnewLM_210008800 LTnewLM_21 AUGUSTUS CDS 106714 109854 1 + 0 ID=LTnewLM_210008800.1:CDS:1;Parent=LTnewLM_210008800.1 ### LTnewLM_21 . polypeptide 106714 109854 . + . ID=LTnewLM_210008800.1:pep;Derives_from=LTnewLM_210008800.1;orthologous_to=LmjF.21.0330_mRNA;ortholog_cluster=OG0002092;product=term%3DExocyst complex component Sec5/Vps51/Vps67/Dor1-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15469|Pfam:PF08700|Pfam:PF04124;Ontology_term=GO:0006893,GO:0000145,GO:0017119 LTnewLM_21 Pfam protein_match 106870 107295 . + . Parent=LTnewLM_210008800.1:pep;Name=PF15469;signature_desc=Exocyst complex component Sec5;Ontology_term=GO:0006893,GO:0000145 LTnewLM_21 Pfam protein_match 106873 107124 . + . Parent=LTnewLM_210008800.1:pep;Name=PF08700;signature_desc=Vps51/Vps67 LTnewLM_21 Pfam protein_match 106936 107376 . + . Parent=LTnewLM_210008800.1:pep;Name=PF04124;signature_desc=Dor1-like family;Ontology_term=GO:0017119 ### LTnewLM_21 AUGUSTUS gene 110994 112397 1 + . ID=LTnewLM_210008900 LTnewLM_21 AUGUSTUS mRNA 110994 112397 1 + . ID=LTnewLM_210008900.1;Parent=LTnewLM_210008900 LTnewLM_21 AUGUSTUS CDS 110994 112397 1 + 0 ID=LTnewLM_210008900.1:CDS:1;Parent=LTnewLM_210008900.1 ### LTnewLM_21 . polypeptide 110994 112397 . + . ID=LTnewLM_210008900.1:pep;Derives_from=LTnewLM_210008900.1;orthologous_to=LmjF.21.0340_mRNA;ortholog_cluster=OG0002093;product=term%3DInsulinase (Peptidase family M16)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00675 LTnewLM_21 Pfam protein_match 111150 111584 . + . Parent=LTnewLM_210008900.1:pep;Name=PF00675;signature_desc=Insulinase (Peptidase family M16) ### LTnewLM_21 AUGUSTUS gene 113423 114094 1 + . ID=LTnewLM_210009000 LTnewLM_21 AUGUSTUS mRNA 113423 114094 1 + . ID=LTnewLM_210009000.1;Parent=LTnewLM_210009000 LTnewLM_21 AUGUSTUS CDS 113423 114094 1 + 0 ID=LTnewLM_210009000.1:CDS:1;Parent=LTnewLM_210009000.1 ### LTnewLM_21 . polypeptide 113423 114094 . + . ID=LTnewLM_210009000.1:pep;Derives_from=LTnewLM_210009000.1;orthologous_to=LmjF.21.0350_mRNA;ortholog_cluster=OG0002094;product=term%3DMitochondrial calcium uniporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04678 LTnewLM_21 Pfam protein_match 113654 114037 . + . Parent=LTnewLM_210009000.1:pep;Name=PF04678;signature_desc=Mitochondrial calcium uniporter ### LTnewLM_21 AUGUSTUS gene 114676 115503 1 + . ID=LTnewLM_210009100 LTnewLM_21 AUGUSTUS mRNA 114676 115503 1 + . ID=LTnewLM_210009100.1;Parent=LTnewLM_210009100 LTnewLM_21 AUGUSTUS CDS 114676 115503 1 + 0 ID=LTnewLM_210009100.1:CDS:1;Parent=LTnewLM_210009100.1 ### LTnewLM_21 . polypeptide 114676 115503 . + . ID=LTnewLM_210009100.1:pep;Derives_from=LTnewLM_210009100.1;orthologous_to=LmjF.21.0360_mRNA;ortholog_cluster=OG0002095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 115846 118023 1 + . ID=LTnewLM_210009200 LTnewLM_21 AUGUSTUS mRNA 115846 118023 1 + . ID=LTnewLM_210009200.1;Parent=LTnewLM_210009200 LTnewLM_21 AUGUSTUS CDS 115846 118023 1 + 0 ID=LTnewLM_210009200.1:CDS:1;Parent=LTnewLM_210009200.1 ### LTnewLM_21 . polypeptide 115846 118023 . + . ID=LTnewLM_210009200.1:pep;Derives_from=LTnewLM_210009200.1;orthologous_to=LmjF.21.0370_mRNA;ortholog_cluster=OG0002096;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 118747 119394 1 + . ID=LTnewLM_210009300 LTnewLM_21 AUGUSTUS mRNA 118747 119394 1 + . ID=LTnewLM_210009300.1;Parent=LTnewLM_210009300 LTnewLM_21 AUGUSTUS CDS 118747 119394 1 + 0 ID=LTnewLM_210009300.1:CDS:1;Parent=LTnewLM_210009300.1 ### LTnewLM_21 . polypeptide 118747 119394 . + . ID=LTnewLM_210009300.1:pep;Derives_from=LTnewLM_210009300.1;orthologous_to=LmjF.21.0380_mRNA;ortholog_cluster=OG0002097;product=term%3DCFA20 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05018 LTnewLM_21 Pfam protein_match 118747 119295 . + . Parent=LTnewLM_210009300.1:pep;Name=PF05018;signature_desc=CFA20 domain ### LTnewLM_21 AUGUSTUS gene 120542 121615 1 + . ID=LTnewLM_210009400 LTnewLM_21 AUGUSTUS mRNA 120542 121615 1 + . ID=LTnewLM_210009400.1;Parent=LTnewLM_210009400 LTnewLM_21 AUGUSTUS CDS 120542 121615 1 + 0 ID=LTnewLM_210009400.1:CDS:1;Parent=LTnewLM_210009400.1 ### LTnewLM_21 . polypeptide 120542 121615 . + . ID=LTnewLM_210009400.1:pep;Derives_from=LTnewLM_210009400.1;orthologous_to=LmjF.21.0390_mRNA;ortholog_cluster=OG0002098;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 124392 126557 1 + . ID=LTnewLM_210009500 LTnewLM_21 AUGUSTUS mRNA 124392 126557 1 + . ID=LTnewLM_210009500.1;Parent=LTnewLM_210009500 LTnewLM_21 AUGUSTUS CDS 124392 126557 1 + 0 ID=LTnewLM_210009500.1:CDS:1;Parent=LTnewLM_210009500.1 ### LTnewLM_21 . polypeptide 124392 126557 . + . ID=LTnewLM_210009500.1:pep;Derives_from=LTnewLM_210009500.1;orthologous_to=LmjF.21.0400_mRNA;ortholog_cluster=OG0002099;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13423|Pfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_21 Pfam protein_match 125172 126437 . + . Parent=LTnewLM_210009500.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase LTnewLM_21 Pfam protein_match 125172 126539 . + . Parent=LTnewLM_210009500.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_21 AUGUSTUS gene 129446 133147 1 + . ID=LTnewLM_210009600 LTnewLM_21 AUGUSTUS mRNA 129446 133147 1 + . ID=LTnewLM_210009600.1;Parent=LTnewLM_210009600 LTnewLM_21 AUGUSTUS CDS 129446 133147 1 + 0 ID=LTnewLM_210009600.1:CDS:1;Parent=LTnewLM_210009600.1 ### LTnewLM_21 . polypeptide 129446 133147 . + . ID=LTnewLM_210009600.1:pep;Derives_from=LTnewLM_210009600.1;orthologous_to=LmjF.21.0410_mRNA;ortholog_cluster=OG0002100;product=term%3DPiwi domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02171;Ontology_term=GO:0003676 LTnewLM_21 Pfam protein_match 132128 133069 . + . Parent=LTnewLM_210009600.1:pep;Name=PF02171;signature_desc=Piwi domain;Ontology_term=GO:0003676 ### LTnewLM_21 AUGUSTUS gene 134259 136358 1 + . ID=LTnewLM_210009700 LTnewLM_21 AUGUSTUS mRNA 134259 136358 1 + . ID=LTnewLM_210009700.1;Parent=LTnewLM_210009700 LTnewLM_21 AUGUSTUS CDS 134259 136358 1 + 0 ID=LTnewLM_210009700.1:CDS:1;Parent=LTnewLM_210009700.1 ### LTnewLM_21 . polypeptide 134259 136358 . + . ID=LTnewLM_210009700.1:pep;Derives_from=LTnewLM_210009700.1;orthologous_to=LmjF.21.0420_mRNA;ortholog_cluster=OG0002101;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 137153 138382 1 + . ID=LTnewLM_210009800 LTnewLM_21 AUGUSTUS mRNA 137153 138382 1 + . ID=LTnewLM_210009800.1;Parent=LTnewLM_210009800 LTnewLM_21 AUGUSTUS CDS 137153 138382 1 + 0 ID=LTnewLM_210009800.1:CDS:1;Parent=LTnewLM_210009800.1 ### LTnewLM_21 . polypeptide 137153 138382 . + . ID=LTnewLM_210009800.1:pep;Derives_from=LTnewLM_210009800.1;orthologous_to=LmjF.21.0430_mRNA;ortholog_cluster=OG0002102;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 139854 140666 1 + . ID=LTnewLM_210009900 LTnewLM_21 AUGUSTUS mRNA 139854 140666 1 + . ID=LTnewLM_210009900.1;Parent=LTnewLM_210009900 LTnewLM_21 AUGUSTUS CDS 139854 140666 1 + 0 ID=LTnewLM_210009900.1:CDS:1;Parent=LTnewLM_210009900.1 ### LTnewLM_21 . polypeptide 139854 140666 . + . ID=LTnewLM_210009900.1:pep;Derives_from=LTnewLM_210009900.1;orthologous_to=LmjF.21.0440_mRNA;ortholog_cluster=OG0002103;product=term%3DLipid desaturase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10520 LTnewLM_21 Pfam protein_match 140094 140639 . + . Parent=LTnewLM_210009900.1:pep;Name=PF10520;signature_desc=Lipid desaturase domain ### LTnewLM_21 AUGUSTUS gene 142103 142870 1 + . ID=LTnewLM_210010000 LTnewLM_21 AUGUSTUS mRNA 142103 142870 1 + . ID=LTnewLM_210010000.1;Parent=LTnewLM_210010000 LTnewLM_21 AUGUSTUS CDS 142103 142870 1 + 0 ID=LTnewLM_210010000.1:CDS:1;Parent=LTnewLM_210010000.1 ### LTnewLM_21 . polypeptide 142103 142870 . + . ID=LTnewLM_210010000.1:pep;Derives_from=LTnewLM_210010000.1;orthologous_to=LmjF.21.0450_mRNA;ortholog_cluster=OG0002104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 143682 146483 1 + . ID=LTnewLM_210010100 LTnewLM_21 AUGUSTUS mRNA 143682 146483 1 + . ID=LTnewLM_210010100.1;Parent=LTnewLM_210010100 LTnewLM_21 AUGUSTUS CDS 143682 146483 1 + 0 ID=LTnewLM_210010100.1:CDS:1;Parent=LTnewLM_210010100.1 ### LTnewLM_21 . polypeptide 143682 146483 . + . ID=LTnewLM_210010100.1:pep;Derives_from=LTnewLM_210010100.1;orthologous_to=LmjF.21.0460_mRNA;ortholog_cluster=OG0002105;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 147893 150931 1 + . ID=LTnewLM_210010200 LTnewLM_21 AUGUSTUS mRNA 147893 150931 1 + . ID=LTnewLM_210010200.1;Parent=LTnewLM_210010200 LTnewLM_21 AUGUSTUS CDS 147893 150931 1 + 0 ID=LTnewLM_210010200.1:CDS:1;Parent=LTnewLM_210010200.1 ### LTnewLM_21 . polypeptide 147893 150931 . + . ID=LTnewLM_210010200.1:pep;Derives_from=LTnewLM_210010200.1;orthologous_to=LmjF.21.0470_mRNA;ortholog_cluster=OG0002106;product=term%3DVacuolar protein sorting-associated protein 35%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03635;Ontology_term=GO:0015031,GO:0030904,GO:0042147 LTnewLM_21 Pfam protein_match 147986 150748 . + . Parent=LTnewLM_210010200.1:pep;Name=PF03635;signature_desc=Vacuolar protein sorting-associated protein 35;Ontology_term=GO:0015031,GO:0042147,GO:0030904 ### LTnewLM_21 Liftoff gene 152048 153541 . + . ID=LTnewLM_210010300;coverage=0.999;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.0480_0 LTnewLM_21 Liftoff mRNA 152048 153541 . + . ID=LTnewLM_210010300.1;Parent=LTnewLM_210010300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 152048 153541 . + 0 ID=LTnewLM_210010300.1:CDS:1;Parent=LTnewLM_210010300.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 152048 153541 . + . ID=LTnewLM_210010300.1:pep;Derives_from=LTnewLM_210010300.1;orthologous_to=LmjF.21.0480_mRNA;ortholog_cluster=OG0002107;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 155112 156458 1 + . ID=LTnewLM_210010400 LTnewLM_21 AUGUSTUS mRNA 155112 156458 1 + . ID=LTnewLM_210010400.1;Parent=LTnewLM_210010400 LTnewLM_21 AUGUSTUS CDS 155112 156458 1 + 0 ID=LTnewLM_210010400.1:CDS:1;Parent=LTnewLM_210010400.1 ### LTnewLM_21 . polypeptide 155112 156458 . + . ID=LTnewLM_210010400.1:pep;Derives_from=LTnewLM_210010400.1;orthologous_to=LmjF.21.0490_mRNA;ortholog_cluster=OG0002108;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_21 Pfam protein_match 155130 155312 . + . Parent=LTnewLM_210010400.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_21 Pfam protein_match 155442 156116 . + . Parent=LTnewLM_210010400.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_21 Pfam protein_match 155523 155723 . + . Parent=LTnewLM_210010400.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 ### LTnewLM_21 AUGUSTUS gene 157952 158596 1 + . ID=LTnewLM_210010500 LTnewLM_21 AUGUSTUS mRNA 157952 158596 1 + . ID=LTnewLM_210010500.1;Parent=LTnewLM_210010500 LTnewLM_21 AUGUSTUS CDS 157952 158596 1 + 0 ID=LTnewLM_210010500.1:CDS:1;Parent=LTnewLM_210010500.1 ### LTnewLM_21 . polypeptide 157952 158596 . + . ID=LTnewLM_210010500.1:pep;Derives_from=LTnewLM_210010500.1;orthologous_to=LmjF.21.0500_mRNA;ortholog_cluster=OG0002109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 160119 161774 1 + . ID=LTnewLM_210010600 LTnewLM_21 AUGUSTUS mRNA 160119 161774 1 + . ID=LTnewLM_210010600.1;Parent=LTnewLM_210010600 LTnewLM_21 AUGUSTUS CDS 160119 161774 1 + 0 ID=LTnewLM_210010600.1:CDS:1;Parent=LTnewLM_210010600.1 ### LTnewLM_21 . polypeptide 160119 161774 . + . ID=LTnewLM_210010600.1:pep;Derives_from=LTnewLM_210010600.1;orthologous_to=LmjF.21.0510_mRNA;ortholog_cluster=OG0002110;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 162508 163851 1 + . ID=LTnewLM_210010700 LTnewLM_21 AUGUSTUS mRNA 162508 163851 1 + . ID=LTnewLM_210010700.1;Parent=LTnewLM_210010700 LTnewLM_21 AUGUSTUS CDS 162508 163851 1 + 0 ID=LTnewLM_210010700.1:CDS:1;Parent=LTnewLM_210010700.1 ### LTnewLM_21 . polypeptide 162508 163851 . + . ID=LTnewLM_210010700.1:pep;Derives_from=LTnewLM_210010700.1;orthologous_to=LmjF.21.0520_mRNA;ortholog_cluster=OG0002111;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 GenomeTools gene 164729 164847 87.4 - . ID=LTnewLM_210010800 LTnewLM_21 INFERNAL rRNA 164729 164847 87.4 - . ID=LTnewLM_210010800:rRNA;Parent=LTnewLM_210010800;gc=0.52;evalue=7.3e-19;score=87.4;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_21 Liftoff gene 164729 164851 . - . ID=LTnewLM_210010900;coverage=1.0;sequence_ID=0.959;extra_copy_number=0;copy_num_ID=LmjF.21.5SrRNA.01_0 LTnewLM_21 Liftoff rRNA 164729 164851 . - . ID=LTnewLM_210010900:rRNA;Parent=LTnewLM_210010900;extra_copy_number=0 ### LTnewLM_21 Aragorn_1.2.36 gene 164910 164990 . - . ID=LTnewLM_210011000 LTnewLM_21 Aragorn_1.2.36 tRNA 164910 164990 . - . ID=LTnewLM_210011000:tRNA;Parent=LTnewLM_210011000;aa=Ser;anticodon=gct;gc_content=59.3 ### LTnewLM_21 AUGUSTUS gene 165735 169202 1 - . ID=LTnewLM_210011100 LTnewLM_21 AUGUSTUS mRNA 165735 169202 1 - . ID=LTnewLM_210011100.1;Parent=LTnewLM_210011100 LTnewLM_21 AUGUSTUS CDS 165735 169202 1 - 0 ID=LTnewLM_210011100.1:CDS:1;Parent=LTnewLM_210011100.1 ### LTnewLM_21 . polypeptide 165735 169202 . - . ID=LTnewLM_210011100.1:pep;Derives_from=LTnewLM_210011100.1;orthologous_to=LmjF.21.0530_mRNA;ortholog_cluster=OG0002112;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 170663 171673 1 - . ID=LTnewLM_210011200 LTnewLM_21 AUGUSTUS mRNA 170663 171673 1 - . ID=LTnewLM_210011200.1;Parent=LTnewLM_210011200 LTnewLM_21 AUGUSTUS CDS 170663 171673 1 - 0 ID=LTnewLM_210011200.1:CDS:1;Parent=LTnewLM_210011200.1 ### LTnewLM_21 . polypeptide 170663 171673 . - . ID=LTnewLM_210011200.1:pep;Derives_from=LTnewLM_210011200.1;orthologous_to=LmjF.21.0540_mRNA;ortholog_cluster=OG0002113;product=term%3DLa domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05383 LTnewLM_21 Pfam protein_match 171482 171652 . - . Parent=LTnewLM_210011200.1:pep;Name=PF05383;signature_desc=La domain ### LTnewLM_21 AUGUSTUS gene 173705 174511 1 - . ID=LTnewLM_210011300 LTnewLM_21 AUGUSTUS mRNA 173705 174511 1 - . ID=LTnewLM_210011300.1;Parent=LTnewLM_210011300 LTnewLM_21 AUGUSTUS CDS 173705 174511 1 - 0 ID=LTnewLM_210011300.1:CDS:1;Parent=LTnewLM_210011300.1 ### LTnewLM_21 . polypeptide 173705 174511 . - . ID=LTnewLM_210011300.1:pep;Derives_from=LTnewLM_210011300.1;orthologous_to=LmjF.21.0550_mRNA;ortholog_cluster=OG0002114;product=term%3DBiotin-requiring enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00364 LTnewLM_21 Pfam protein_match 174257 174469 . - . Parent=LTnewLM_210011300.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme ### LTnewLM_21 AUGUSTUS gene 175656 175946 1 - . ID=LTnewLM_210011400 LTnewLM_21 AUGUSTUS mRNA 175656 175946 1 - . ID=LTnewLM_210011400.1;Parent=LTnewLM_210011400 LTnewLM_21 AUGUSTUS CDS 175656 175946 1 - 0 ID=LTnewLM_210011400.1:CDS:1;Parent=LTnewLM_210011400.1 ### LTnewLM_21 . polypeptide 175656 175946 . - . ID=LTnewLM_210011400.1:pep;Derives_from=LTnewLM_210011400.1;orthologous_to=LmjF.21.0560_mRNA;ortholog_cluster=OG0002115;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 177492 178817 1 - . ID=LTnewLM_210011500 LTnewLM_21 AUGUSTUS mRNA 177492 178817 1 - . ID=LTnewLM_210011500.1;Parent=LTnewLM_210011500 LTnewLM_21 AUGUSTUS CDS 177492 178817 1 - 0 ID=LTnewLM_210011500.1:CDS:1;Parent=LTnewLM_210011500.1 ### LTnewLM_21 . polypeptide 177492 178817 . - . ID=LTnewLM_210011500.1:pep;Derives_from=LTnewLM_210011500.1;orthologous_to=LmjF.21.0570_mRNA;ortholog_cluster=OG0002116;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 179385 180779 1 - . ID=LTnewLM_210011600 LTnewLM_21 AUGUSTUS mRNA 179385 180779 1 - . ID=LTnewLM_210011600.1;Parent=LTnewLM_210011600 LTnewLM_21 AUGUSTUS CDS 179385 180779 1 - 0 ID=LTnewLM_210011600.1:CDS:1;Parent=LTnewLM_210011600.1 ### LTnewLM_21 . polypeptide 179385 180779 . - . ID=LTnewLM_210011600.1:pep;Derives_from=LTnewLM_210011600.1;orthologous_to=LmjF.21.0580_mRNA;ortholog_cluster=OG0002117;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 182014 183180 1 - . ID=LTnewLM_210011700 LTnewLM_21 AUGUSTUS mRNA 182014 183180 1 - . ID=LTnewLM_210011700.1;Parent=LTnewLM_210011700 LTnewLM_21 AUGUSTUS CDS 182014 183180 1 - 0 ID=LTnewLM_210011700.1:CDS:1;Parent=LTnewLM_210011700.1 ### LTnewLM_21 . polypeptide 182014 183180 . - . ID=LTnewLM_210011700.1:pep;Derives_from=LTnewLM_210011700.1;orthologous_to=LmjF.21.0590_mRNA;ortholog_cluster=OG0002118;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 184282 185892 1 - . ID=LTnewLM_210011800 LTnewLM_21 AUGUSTUS mRNA 184282 185892 1 - . ID=LTnewLM_210011800.1;Parent=LTnewLM_210011800 LTnewLM_21 AUGUSTUS CDS 184282 185892 1 - 0 ID=LTnewLM_210011800.1:CDS:1;Parent=LTnewLM_210011800.1 ### LTnewLM_21 . polypeptide 184282 185892 . - . ID=LTnewLM_210011800.1:pep;Derives_from=LTnewLM_210011800.1;orthologous_to=LmjF.21.0600_mRNA;ortholog_cluster=OG0002119;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 186785 188875 1 - . ID=LTnewLM_210011900 LTnewLM_21 AUGUSTUS mRNA 186785 188875 1 - . ID=LTnewLM_210011900.1;Parent=LTnewLM_210011900 LTnewLM_21 AUGUSTUS CDS 186785 188875 1 - 0 ID=LTnewLM_210011900.1:CDS:1;Parent=LTnewLM_210011900.1 ### LTnewLM_21 . polypeptide 186785 188875 . - . ID=LTnewLM_210011900.1:pep;Derives_from=LTnewLM_210011900.1;orthologous_to=LmjF.21.0610_mRNA;ortholog_cluster=OG0002120;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_21 Pfam protein_match 187220 187438 . - . Parent=LTnewLM_210011900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_21 Pfam protein_match 188252 188596 . - . Parent=LTnewLM_210011900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_21 AUGUSTUS gene 189734 192094 1 - . ID=LTnewLM_210012000 LTnewLM_21 AUGUSTUS mRNA 189734 192094 1 - . ID=LTnewLM_210012000.1;Parent=LTnewLM_210012000 LTnewLM_21 AUGUSTUS CDS 189734 192094 1 - 0 ID=LTnewLM_210012000.1:CDS:1;Parent=LTnewLM_210012000.1 ### LTnewLM_21 . polypeptide 189734 192094 . - . ID=LTnewLM_210012000.1:pep;Derives_from=LTnewLM_210012000.1;orthologous_to=LmjF.21.0620_mRNA;ortholog_cluster=OG0002121;product=term%3DimpB/mucB/samB family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_21 Pfam protein_match 191216 191980 . - . Parent=LTnewLM_210012000.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 ### LTnewLM_21 AUGUSTUS gene 192797 195082 1 - . ID=LTnewLM_210012100 LTnewLM_21 AUGUSTUS mRNA 192797 195082 1 - . ID=LTnewLM_210012100.1;Parent=LTnewLM_210012100 LTnewLM_21 AUGUSTUS CDS 192797 195082 1 - 0 ID=LTnewLM_210012100.1:CDS:1;Parent=LTnewLM_210012100.1 ### LTnewLM_21 . polypeptide 192797 195082 . - . ID=LTnewLM_210012100.1:pep;Derives_from=LTnewLM_210012100.1;orthologous_to=LmjF.21.0630_mRNA;ortholog_cluster=OG0002122;product=term%3DimpB/mucB/samB family/impB/mucB/samB family C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817|Pfam:PF11799;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_21 Pfam protein_match 193520 193858 . - . Parent=LTnewLM_210012100.1:pep;Name=PF11799;signature_desc=impB/mucB/samB family C-terminal domain;Ontology_term=GO:0003684,GO:0006281 LTnewLM_21 Pfam protein_match 194261 195022 . - . Parent=LTnewLM_210012100.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 ### LTnewLM_21 AUGUSTUS gene 197105 198874 1 - . ID=LTnewLM_210012200 LTnewLM_21 AUGUSTUS mRNA 197105 198874 1 - . ID=LTnewLM_210012200.1;Parent=LTnewLM_210012200 LTnewLM_21 AUGUSTUS CDS 197105 198874 1 - 0 ID=LTnewLM_210012200.1:CDS:1;Parent=LTnewLM_210012200.1 ### LTnewLM_21 . polypeptide 197105 198874 . - . ID=LTnewLM_210012200.1:pep;Derives_from=LTnewLM_210012200.1;orthologous_to=LmjF.21.0640_mRNA;ortholog_cluster=OG0002123;product=term%3DPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I/Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II/Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III/Phosphoglucomutase/phosphomannomutase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02878|Pfam:PF02879|Pfam:PF02880|Pfam:PF00408;Ontology_term=GO:0005975,GO:0071704,GO:0016868 LTnewLM_21 Pfam protein_match 197231 197458 . - . Parent=LTnewLM_210012200.1:pep;Name=PF00408;signature_desc=Phosphoglucomutase/phosphomannomutase%2C C-terminal domain;Ontology_term=GO:0016868,GO:0071704 LTnewLM_21 Pfam protein_match 197537 197926 . - . Parent=LTnewLM_210012200.1:pep;Name=PF02880;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III;Ontology_term=GO:0016868,GO:0005975 LTnewLM_21 Pfam protein_match 197957 198301 . - . Parent=LTnewLM_210012200.1:pep;Name=PF02879;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;Ontology_term=GO:0016868,GO:0005975 LTnewLM_21 Pfam protein_match 198410 198844 . - . Parent=LTnewLM_210012200.1:pep;Name=PF02878;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I;Ontology_term=GO:0016868,GO:0005975 ### LTnewLM_21 AUGUSTUS gene 199884 201803 1 - . ID=LTnewLM_210012300 LTnewLM_21 AUGUSTUS mRNA 199884 201803 1 - . ID=LTnewLM_210012300.1;Parent=LTnewLM_210012300 LTnewLM_21 AUGUSTUS CDS 199884 201803 1 - 0 ID=LTnewLM_210012300.1:CDS:1;Parent=LTnewLM_210012300.1 ### LTnewLM_21 . polypeptide 199884 201803 . - . ID=LTnewLM_210012300.1:pep;Derives_from=LTnewLM_210012300.1;orthologous_to=LmjF.21.0650_mRNA;ortholog_cluster=OG0002124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 203255 204238 1 - . ID=LTnewLM_210012400 LTnewLM_21 AUGUSTUS mRNA 203255 204238 1 - . ID=LTnewLM_210012400.1;Parent=LTnewLM_210012400 LTnewLM_21 AUGUSTUS CDS 203255 204238 1 - 0 ID=LTnewLM_210012400.1:CDS:1;Parent=LTnewLM_210012400.1 ### LTnewLM_21 . polypeptide 203255 204238 . - . ID=LTnewLM_210012400.1:pep;Derives_from=LTnewLM_210012400.1;orthologous_to=LmjF.21.0660_mRNA;ortholog_cluster=OG0002125;product=term%3DNUBPL iron-transfer P-loop NTPase/ATPase MipZ/AAA domain/CobQ/CobB/MinD/ParA nucleotide binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10609|Pfam:PF09140|Pfam:PF13614|Pfam:PF01656 LTnewLM_21 Pfam protein_match 203336 204076 . - . Parent=LTnewLM_210012400.1:pep;Name=PF10609;signature_desc=NUBPL iron-transfer P-loop NTPase LTnewLM_21 Pfam protein_match 203372 204064 . - . Parent=LTnewLM_210012400.1:pep;Name=PF01656;signature_desc=CobQ/CobB/MinD/ParA nucleotide binding domain LTnewLM_21 Pfam protein_match 203678 204064 . - . Parent=LTnewLM_210012400.1:pep;Name=PF13614;signature_desc=AAA domain LTnewLM_21 Pfam protein_match 203708 204070 . - . Parent=LTnewLM_210012400.1:pep;Name=PF09140;signature_desc=ATPase MipZ ### LTnewLM_21 AUGUSTUS gene 205539 206549 1 - . ID=LTnewLM_210012500 LTnewLM_21 AUGUSTUS mRNA 205539 206549 1 - . ID=LTnewLM_210012500.1;Parent=LTnewLM_210012500 LTnewLM_21 AUGUSTUS CDS 205539 206549 1 - 0 ID=LTnewLM_210012500.1:CDS:1;Parent=LTnewLM_210012500.1 ### LTnewLM_21 . polypeptide 205539 206549 . - . ID=LTnewLM_210012500.1:pep;Derives_from=LTnewLM_210012500.1;orthologous_to=LmjF.21.0670_mRNA;ortholog_cluster=OG0002126;product=term%3DMetallo-beta-lactamase superfamily/Beta-lactamase associated winged helix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00753|Pfam:PF17778 LTnewLM_21 Pfam protein_match 205698 205811 . - . Parent=LTnewLM_210012500.1:pep;Name=PF17778;signature_desc=Beta-lactamase associated winged helix domain LTnewLM_21 Pfam protein_match 205950 206450 . - . Parent=LTnewLM_210012500.1:pep;Name=PF00753;signature_desc=Metallo-beta-lactamase superfamily ### LTnewLM_21 AUGUSTUS gene 207680 208972 1 - . ID=LTnewLM_210012600 LTnewLM_21 AUGUSTUS mRNA 207680 208972 1 - . ID=LTnewLM_210012600.1;Parent=LTnewLM_210012600 LTnewLM_21 AUGUSTUS CDS 207680 208972 1 - 0 ID=LTnewLM_210012600.1:CDS:1;Parent=LTnewLM_210012600.1 ### LTnewLM_21 . polypeptide 207680 208972 . - . ID=LTnewLM_210012600.1:pep;Derives_from=LTnewLM_210012600.1;orthologous_to=LmjF.21.0680_mRNA;ortholog_cluster=OG0002127;product=term%3DHistone deacetylase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00850 LTnewLM_21 Pfam protein_match 207977 208846 . - . Parent=LTnewLM_210012600.1:pep;Name=PF00850;signature_desc=Histone deacetylase domain ### LTnewLM_21 AUGUSTUS gene 209815 210261 1 - . ID=LTnewLM_210012700 LTnewLM_21 AUGUSTUS mRNA 209815 210261 1 - . ID=LTnewLM_210012700.1;Parent=LTnewLM_210012700 LTnewLM_21 AUGUSTUS CDS 209815 210261 1 - 0 ID=LTnewLM_210012700.1:CDS:1;Parent=LTnewLM_210012700.1 ### LTnewLM_21 . polypeptide 209815 210261 . - . ID=LTnewLM_210012700.1:pep;Derives_from=LTnewLM_210012700.1;orthologous_to=LmjF.21.0690_mRNA;ortholog_cluster=OG0002128;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 213963 215828 1 - . ID=LTnewLM_210012800 LTnewLM_21 AUGUSTUS mRNA 213963 215828 1 - . ID=LTnewLM_210012800.1;Parent=LTnewLM_210012800 LTnewLM_21 AUGUSTUS CDS 213963 215828 1 - 0 ID=LTnewLM_210012800.1:CDS:1;Parent=LTnewLM_210012800.1 ### LTnewLM_21 . polypeptide 213963 215828 . - . ID=LTnewLM_210012800.1:pep;Derives_from=LTnewLM_210012800.1;orthologous_to=LmjF.21.0700_mRNA;ortholog_cluster=OG0002129;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_21 Pfam protein_match 215373 215789 . - . Parent=LTnewLM_210012800.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_21 AUGUSTUS gene 217412 219391 1 - . ID=LTnewLM_210012900 LTnewLM_21 AUGUSTUS mRNA 217412 219391 1 - . ID=LTnewLM_210012900.1;Parent=LTnewLM_210012900 LTnewLM_21 AUGUSTUS CDS 217412 219391 1 - 0 ID=LTnewLM_210012900.1:CDS:1;Parent=LTnewLM_210012900.1 ### LTnewLM_21 . polypeptide 217412 219391 . - . ID=LTnewLM_210012900.1:pep;Derives_from=LTnewLM_210012900.1;orthologous_to=LmjF.21.0710_mRNA;ortholog_cluster=OG0002130;product=term%3DPossible Fer4-like domain in RNase L inhibitor%2C RLI/4Fe-4S binding domain/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04068|Pfam:PF00037|Pfam:PF00005;Ontology_term=GO:0051536,GO:0016887,GO:0005524 LTnewLM_21 Pfam protein_match 217901 218266 . - . Parent=LTnewLM_210012900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_21 Pfam protein_match 218639 219064 . - . Parent=LTnewLM_210012900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_21 Pfam protein_match 219158 219223 . - . Parent=LTnewLM_210012900.1:pep;Name=PF00037;signature_desc=4Fe-4S binding domain;Ontology_term=GO:0051536 LTnewLM_21 Pfam protein_match 219263 219352 . - . Parent=LTnewLM_210012900.1:pep;Name=PF04068;signature_desc=Possible Fer4-like domain in RNase L inhibitor%2C RLI ### LTnewLM_21 . polypeptide 221494 222426 . - . ID=LTnewLM_210013000.1:pep;Derives_from=LTnewLM_210013000.1;orthologous_to=LTnewLM_210013000.2,LmjF.21.0720.1_mRNA,LmjF.21.0720.2_mRNA;ortholog_cluster=OG0000152;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 221494 222561 . - . ID=LTnewLM_210013000.2:pep;Derives_from=LTnewLM_210013000.2;orthologous_to=LTnewLM_210013000.1,LmjF.21.0720.1_mRNA,LmjF.21.0720.2_mRNA;ortholog_cluster=OG0000152;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 Liftoff gene 221494 222918 . - . ID=LTnewLM_210013000;coverage=0.991;sequence_ID=0.919;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.21.0720_0 LTnewLM_21 Liftoff mRNA 221494 222461 . - . ID=LTnewLM_210013000.1;Parent=LTnewLM_210013000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 221494 222426 . - 0 ID=LTnewLM_210013000.1:CDS:1;Parent=LTnewLM_210013000.1;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 222427 222461 . - . ID=LTnewLM_210013000:five_prime_UTR;Parent=LTnewLM_210013000.1;extra_copy_number=0 LTnewLM_21 Liftoff mRNA 221494 222918 . - . ID=LTnewLM_210013000.2;Parent=LTnewLM_210013000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 221494 222561 . - 0 ID=LTnewLM_210013000.2:CDS:1;Parent=LTnewLM_210013000.2;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 222562 222918 . - . ID=LTnewLM_210013000:five_prime_UTR.1;Parent=LTnewLM_210013000.2;extra_copy_number=0 ### LTnewLM_21 Liftoff gene 230021 231188 . + . ID=LTnewLM_210013100;coverage=0.997;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.0725_0 LTnewLM_21 Liftoff mRNA 230021 231188 . + . ID=LTnewLM_210013100.1;Parent=LTnewLM_210013100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 230021 230057 . + . ID=LTnewLM_210013100:five_prime_UTR;Parent=LTnewLM_210013100.1;extra_copy_number=0 LTnewLM_21 Liftoff CDS 230058 231188 . + 0 ID=LTnewLM_210013100.1:CDS:1;Parent=LTnewLM_210013100.1;extra_copy_number=0 LTnewLM_21 Liftoff mRNA 230081 231188 . + . ID=LTnewLM_210013100.2;Parent=LTnewLM_210013100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 230081 230450 . + . ID=LTnewLM_210013100:five_prime_UTR.1;Parent=LTnewLM_210013100.2;extra_copy_number=0 LTnewLM_21 Liftoff CDS 230451 231188 . + 0 ID=LTnewLM_210013100.2:CDS:1;Parent=LTnewLM_210013100.2;extra_copy_number=0 ### LTnewLM_21 . polypeptide 230058 231188 . + . ID=LTnewLM_210013100.1:pep;Derives_from=LTnewLM_210013100.1;orthologous_to=LmjF.21.0725.2_mRNA;ortholog_cluster=OG0002131;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 230451 231188 . + . ID=LTnewLM_210013100.2:pep;Derives_from=LTnewLM_210013100.2;orthologous_to=LmjF.21.0725.1_mRNA;ortholog_cluster=OG0002132;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 231544 231945 1 + . ID=LTnewLM_210013200 LTnewLM_21 AUGUSTUS mRNA 231544 231945 1 + . ID=LTnewLM_210013200.1;Parent=LTnewLM_210013200 LTnewLM_21 AUGUSTUS CDS 231544 231945 1 + 0 ID=LTnewLM_210013200.1:CDS:1;Parent=LTnewLM_210013200.1 ### LTnewLM_21 . polypeptide 231544 231945 . + . ID=LTnewLM_210013200.1:pep;Derives_from=LTnewLM_210013200.1;product=term%3DRibosomal protein L36e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01158;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 231646 231927 . + . Parent=LTnewLM_210013200.1:pep;Name=PF01158;signature_desc=Ribosomal protein L36e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 Liftoff gene 232266 232550 . + . ID=LTnewLM_210013300;coverage=1.0;sequence_ID=0.968;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.21.0735_0 LTnewLM_21 Liftoff mRNA 232266 232550 . + . ID=LTnewLM_210013300.1;Parent=LTnewLM_210013300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 232266 232550 . + 0 ID=LTnewLM_210013300.1:CDS:1;Parent=LTnewLM_210013300.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 232266 232550 . + . ID=LTnewLM_210013300.1:pep;Derives_from=LTnewLM_210013300.1;orthologous_to=LmjF.21.0735_mRNA;ortholog_cluster=OG0002133;product=term%3DDomain of unknown function (DUF543)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04418 LTnewLM_21 Pfam protein_match 232302 232478 . + . Parent=LTnewLM_210013300.1:pep;Name=PF04418;signature_desc=Domain of unknown function (DUF543) ### LTnewLM_21 AUGUSTUS gene 232901 233221 1 + . ID=LTnewLM_210013400 LTnewLM_21 AUGUSTUS mRNA 232901 233221 1 + . ID=LTnewLM_210013400.1;Parent=LTnewLM_210013400 LTnewLM_21 AUGUSTUS CDS 232901 233221 1 + 0 ID=LTnewLM_210013400.1:CDS:1;Parent=LTnewLM_210013400.1 ### LTnewLM_21 . polypeptide 232901 233221 . + . ID=LTnewLM_210013400.1:pep;Derives_from=LTnewLM_210013400.1;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_21 Pfam protein_match 233024 233206 . + . Parent=LTnewLM_210013400.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_21 AUGUSTUS gene 233761 235929 1 + . ID=LTnewLM_210013500 LTnewLM_21 AUGUSTUS mRNA 233761 235929 1 + . ID=LTnewLM_210013500.1;Parent=LTnewLM_210013500 LTnewLM_21 AUGUSTUS CDS 233761 235929 1 + 0 ID=LTnewLM_210013500.1:CDS:1;Parent=LTnewLM_210013500.1 ### LTnewLM_21 . polypeptide 233761 235929 . + . ID=LTnewLM_210013500.1:pep;Derives_from=LTnewLM_210013500.1;orthologous_to=LmjF.21.0750_mRNA;ortholog_cluster=OG0002134;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 237074 238498 1 + . ID=LTnewLM_210013600 LTnewLM_21 AUGUSTUS mRNA 237074 238498 1 + . ID=LTnewLM_210013600.1;Parent=LTnewLM_210013600 LTnewLM_21 AUGUSTUS CDS 237074 238498 1 + 0 ID=LTnewLM_210013600.1:CDS:1;Parent=LTnewLM_210013600.1 ### LTnewLM_21 . polypeptide 237074 238498 . + . ID=LTnewLM_210013600.1:pep;Derives_from=LTnewLM_210013600.1;orthologous_to=LmjF.21.0760_mRNA;ortholog_cluster=OG0002135;product=term%3DPCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01399;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 238160 238357 . + . Parent=LTnewLM_210013600.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 241116 242609 1 + . ID=LTnewLM_210013700 LTnewLM_21 AUGUSTUS mRNA 241116 242609 1 + . ID=LTnewLM_210013700.1;Parent=LTnewLM_210013700 LTnewLM_21 AUGUSTUS CDS 241116 242609 1 + 0 ID=LTnewLM_210013700.1:CDS:1;Parent=LTnewLM_210013700.1 ### LTnewLM_21 . polypeptide 241116 242609 . + . ID=LTnewLM_210013700.1:pep;Derives_from=LTnewLM_210013700.1;orthologous_to=LmjF.21.0770_mRNA;ortholog_cluster=OG0002136;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 246569 249847 1 + . ID=LTnewLM_210013800 LTnewLM_21 AUGUSTUS mRNA 246569 249847 1 + . ID=LTnewLM_210013800.1;Parent=LTnewLM_210013800 LTnewLM_21 AUGUSTUS CDS 246569 249847 1 + 0 ID=LTnewLM_210013800.1:CDS:1;Parent=LTnewLM_210013800.1 ### LTnewLM_21 . polypeptide 246569 249847 . + . ID=LTnewLM_210013800.1:pep;Derives_from=LTnewLM_210013800.1;orthologous_to=LmjF.21.0780_mRNA;ortholog_cluster=OG0002137;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 251711 252577 1 + . ID=LTnewLM_210013900 LTnewLM_21 AUGUSTUS mRNA 251711 252577 1 + . ID=LTnewLM_210013900.1;Parent=LTnewLM_210013900 LTnewLM_21 AUGUSTUS CDS 251711 252577 1 + 0 ID=LTnewLM_210013900.1:CDS:1;Parent=LTnewLM_210013900.1 ### LTnewLM_21 . polypeptide 251711 252577 . + . ID=LTnewLM_210013900.1:pep;Derives_from=LTnewLM_210013900.1;orthologous_to=LmjF.21.0790_mRNA;ortholog_cluster=OG0002138;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_21 Pfam protein_match 251729 252145 . + . Parent=LTnewLM_210013900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_21 Pfam protein_match 251741 252112 . + . Parent=LTnewLM_210013900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_21 Pfam protein_match 251741 252250 . + . Parent=LTnewLM_210013900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_21 AUGUSTUS gene 253364 253876 0.62 + . ID=LTnewLM_210014000 LTnewLM_21 AUGUSTUS mRNA 253364 253876 0.62 + . ID=LTnewLM_210014000.1;Parent=LTnewLM_210014000 LTnewLM_21 AUGUSTUS CDS 253364 253418 0.62 + 0 ID=LTnewLM_210014000.1:CDS:1;Parent=LTnewLM_210014000.1 LTnewLM_21 AUGUSTUS CDS 253509 253876 0.67 + 2 ID=LTnewLM_210014000.1:CDS:2;Parent=LTnewLM_210014000.1 ### LTnewLM_21 . polypeptide 253364 253876 . + . ID=LTnewLM_210014000.1:pep;Derives_from=LTnewLM_210014000.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 256501 263262 1 + . ID=LTnewLM_210014100 LTnewLM_21 AUGUSTUS mRNA 256501 263262 1 + . ID=LTnewLM_210014100.1;Parent=LTnewLM_210014100 LTnewLM_21 AUGUSTUS CDS 256501 263262 1 + 0 ID=LTnewLM_210014100.1:CDS:1;Parent=LTnewLM_210014100.1 ### LTnewLM_21 . polypeptide 256501 263262 . + . ID=LTnewLM_210014100.1:pep;Derives_from=LTnewLM_210014100.1;orthologous_to=LmjF.21.0800_mRNA;ortholog_cluster=OG0002139;product=term%3DCCR4-NOT transcription complex subunit 1 TTP binding domain/CCR4-NOT transcription complex subunit 1 CAF1-binding domain/CCR4-Not complex%2C Not1 subunit%2C domain of unknown function DUF3819/CCR4-Not complex component%2C Not1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16417|Pfam:PF16415|Pfam:PF12842|Pfam:PF04054 LTnewLM_21 Pfam protein_match 258265 258807 . + . Parent=LTnewLM_210014100.1:pep;Name=PF16417;signature_desc=CCR4-NOT transcription complex subunit 1 TTP binding domain LTnewLM_21 Pfam protein_match 259027 259683 . + . Parent=LTnewLM_210014100.1:pep;Name=PF16415;signature_desc=CCR4-NOT transcription complex subunit 1 CAF1-binding domain LTnewLM_21 Pfam protein_match 260050 260436 . + . Parent=LTnewLM_210014100.1:pep;Name=PF12842;signature_desc=CCR4-Not complex%2C Not1 subunit%2C domain of unknown function DUF3819 LTnewLM_21 Pfam protein_match 262054 263130 . + . Parent=LTnewLM_210014100.1:pep;Name=PF04054;signature_desc=CCR4-Not complex component%2C Not1 ### LTnewLM_21 AUGUSTUS gene 264606 266849 1 + . ID=LTnewLM_210014200 LTnewLM_21 AUGUSTUS mRNA 264606 266849 1 + . ID=LTnewLM_210014200.1;Parent=LTnewLM_210014200 LTnewLM_21 AUGUSTUS CDS 264606 266849 1 + 0 ID=LTnewLM_210014200.1:CDS:1;Parent=LTnewLM_210014200.1 ### LTnewLM_21 . polypeptide 264606 266849 . + . ID=LTnewLM_210014200.1:pep;Derives_from=LTnewLM_210014200.1;orthologous_to=LmjF.21.0810_mRNA;ortholog_cluster=OG0002140;product=term%3DtRNA synthetases class I (I%2C L%2C M and V)/tRNA synthetases class I (M)/Anticodon binding domain of methionyl tRNA ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00133|Pfam:PF09334|Pfam:PF19303;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_21 Pfam protein_match 265218 265415 . + . Parent=LTnewLM_210014200.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_21 Pfam protein_match 265239 266357 . + . Parent=LTnewLM_210014200.1:pep;Name=PF09334;signature_desc=tRNA synthetases class I (M);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_21 Pfam protein_match 266013 266270 . + . Parent=LTnewLM_210014200.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_21 Pfam protein_match 266394 266804 . + . Parent=LTnewLM_210014200.1:pep;Name=PF19303;signature_desc=Anticodon binding domain of methionyl tRNA ligase ### LTnewLM_21 AUGUSTUS gene 268960 269214 1 + . ID=LTnewLM_210014300 LTnewLM_21 AUGUSTUS mRNA 268960 269214 1 + . ID=LTnewLM_210014300.1;Parent=LTnewLM_210014300 LTnewLM_21 AUGUSTUS CDS 268960 269214 1 + 0 ID=LTnewLM_210014300.1:CDS:1;Parent=LTnewLM_210014300.1 ### LTnewLM_21 . polypeptide 268960 269214 . + . ID=LTnewLM_210014300.1:pep;Derives_from=LTnewLM_210014300.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 270625 274746 1 + . ID=LTnewLM_210014400 LTnewLM_21 AUGUSTUS mRNA 270625 274746 1 + . ID=LTnewLM_210014400.1;Parent=LTnewLM_210014400 LTnewLM_21 AUGUSTUS CDS 270625 274746 1 + 0 ID=LTnewLM_210014400.1:CDS:1;Parent=LTnewLM_210014400.1 ### LTnewLM_21 . polypeptide 270625 274746 . + . ID=LTnewLM_210014400.1:pep;Derives_from=LTnewLM_210014400.1;orthologous_to=LmjF.21.0820_mRNA;ortholog_cluster=OG0002141;product=term%3DTemperature dependent protein affecting M2 dsRNA replication%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12247|Pfam:PF12246 LTnewLM_21 Pfam protein_match 273262 273516 . + . Parent=LTnewLM_210014400.1:pep;Name=PF12247;signature_desc=Temperature dependent protein affecting M2 dsRNA replication LTnewLM_21 Pfam protein_match 273988 274563 . + . Parent=LTnewLM_210014400.1:pep;Name=PF12246;signature_desc=Temperature dependent protein affecting M2 dsRNA replication ### LTnewLM_21 AUGUSTUS gene 280299 283253 1 + . ID=LTnewLM_210014500 LTnewLM_21 AUGUSTUS mRNA 280299 283253 1 + . ID=LTnewLM_210014500.1;Parent=LTnewLM_210014500 LTnewLM_21 AUGUSTUS CDS 280299 283253 1 + 0 ID=LTnewLM_210014500.1:CDS:1;Parent=LTnewLM_210014500.1 ### LTnewLM_21 . polypeptide 280299 283253 . + . ID=LTnewLM_210014500.1:pep;Derives_from=LTnewLM_210014500.1;orthologous_to=LmjF.21.0823_mRNA;ortholog_cluster=OG0002142;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 280632 281462 . + . Parent=LTnewLM_210014500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 280803 281048 . + . Parent=LTnewLM_210014500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_21 . polypeptide 286834 288049 . + . ID=LTnewLM_210014600.1:pep;Derives_from=LTnewLM_210014600.1;orthologous_to=LTnewLM_210014600.2,LmjF.21.0825_mRNA;ortholog_cluster=OG0000378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 286834 297019 1.88 + . ID=LTnewLM_210014600 LTnewLM_21 AUGUSTUS mRNA 286834 288049 0.88 + . ID=LTnewLM_210014600.1;Parent=LTnewLM_210014600 LTnewLM_21 AUGUSTUS CDS 286834 287928 0.9 + 0 ID=LTnewLM_210014600.1:CDS:1;Parent=LTnewLM_210014600.1 LTnewLM_21 AUGUSTUS CDS 288008 288049 0.88 + 0 ID=LTnewLM_210014600.1:CDS:2;Parent=LTnewLM_210014600.1 LTnewLM_21 AUGUSTUS mRNA 286834 297019 1 + . ID=LTnewLM_210014600.2;Parent=LTnewLM_210014600 LTnewLM_21 AUGUSTUS CDS 286834 289160 1 + 0 ID=LTnewLM_210014600.2:CDS:1;Parent=LTnewLM_210014600.2 LTnewLM_21 AUGUSTUS CDS 289216 297019 1 + 1 ID=LTnewLM_210014600.2:CDS:2;Parent=LTnewLM_210014600.2 ### LTnewLM_21 . polypeptide 286834 297019 . + . ID=LTnewLM_210014600.2:pep;Derives_from=LTnewLM_210014600.2;orthologous_to=LTnewLM_210014600.1,LmjF.21.0825_mRNA;ortholog_cluster=OG0000378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 299308 299952 1 + . ID=LTnewLM_210014700 LTnewLM_21 AUGUSTUS mRNA 299308 299952 1 + . ID=LTnewLM_210014700.1;Parent=LTnewLM_210014700 LTnewLM_21 AUGUSTUS CDS 299308 299952 1 + 0 ID=LTnewLM_210014700.1:CDS:1;Parent=LTnewLM_210014700.1 ### LTnewLM_21 . polypeptide 299308 299952 . + . ID=LTnewLM_210014700.1:pep;Derives_from=LTnewLM_210014700.1;orthologous_to=LmjF.21.0827_mRNA;ortholog_cluster=OG0002143;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 300987 302141 1 + . ID=LTnewLM_210014800 LTnewLM_21 AUGUSTUS mRNA 300987 302141 1 + . ID=LTnewLM_210014800.1;Parent=LTnewLM_210014800 LTnewLM_21 AUGUSTUS CDS 300987 302141 1 + 0 ID=LTnewLM_210014800.1:CDS:1;Parent=LTnewLM_210014800.1 ### LTnewLM_21 . polypeptide 300987 302141 . + . ID=LTnewLM_210014800.1:pep;Derives_from=LTnewLM_210014800.1;orthologous_to=LmjF.21.0830_mRNA;ortholog_cluster=OG0002144;product=term%3DDomain of unknown function (DUF4833)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16117 LTnewLM_21 Pfam protein_match 301959 302126 . + . Parent=LTnewLM_210014800.1:pep;Name=PF16117;signature_desc=Domain of unknown function (DUF4833) ### LTnewLM_21 AUGUSTUS gene 303922 304893 1 + . ID=LTnewLM_210014900 LTnewLM_21 AUGUSTUS mRNA 303922 304893 1 + . ID=LTnewLM_210014900.1;Parent=LTnewLM_210014900 LTnewLM_21 AUGUSTUS CDS 303922 304893 1 + 0 ID=LTnewLM_210014900.1:CDS:1;Parent=LTnewLM_210014900.1 ### LTnewLM_21 . polypeptide 303922 304893 . + . ID=LTnewLM_210014900.1:pep;Derives_from=LTnewLM_210014900.1;orthologous_to=LmjF.21.0835_mRNA;ortholog_cluster=OG0002145;product=term%3DDomain of unknown function (DUF4833)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16117 LTnewLM_21 Pfam protein_match 304156 304419 . + . Parent=LTnewLM_210014900.1:pep;Name=PF16117;signature_desc=Domain of unknown function (DUF4833) LTnewLM_21 Pfam protein_match 304720 304878 . + . Parent=LTnewLM_210014900.1:pep;Name=PF16117;signature_desc=Domain of unknown function (DUF4833) ### LTnewLM_21 AUGUSTUS gene 306665 308062 1 + . ID=LTnewLM_210015000 LTnewLM_21 AUGUSTUS mRNA 306665 308062 1 + . ID=LTnewLM_210015000.1;Parent=LTnewLM_210015000 LTnewLM_21 AUGUSTUS CDS 306665 308062 1 + 0 ID=LTnewLM_210015000.1:CDS:1;Parent=LTnewLM_210015000.1 ### LTnewLM_21 . polypeptide 306665 308062 . + . ID=LTnewLM_210015000.1:pep;Derives_from=LTnewLM_210015000.1;orthologous_to=LmjF.21.0840_mRNA;ortholog_cluster=OG0002146;product=term%3DMetallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00557 LTnewLM_21 Pfam protein_match 307124 308011 . + . Parent=LTnewLM_210015000.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_21 AUGUSTUS gene 310776 311735 1 + . ID=LTnewLM_210015100 LTnewLM_21 AUGUSTUS mRNA 310776 311735 1 + . ID=LTnewLM_210015100.1;Parent=LTnewLM_210015100 LTnewLM_21 AUGUSTUS CDS 310776 311735 1 + 0 ID=LTnewLM_210015100.1:CDS:1;Parent=LTnewLM_210015100.1 ### LTnewLM_21 . polypeptide 310776 311735 . + . ID=LTnewLM_210015100.1:pep;Derives_from=LTnewLM_210015100.1;orthologous_to=LmjF.21.0843_mRNA;ortholog_cluster=OG0002147;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 312605 313240 1 + . ID=LTnewLM_210015200 LTnewLM_21 AUGUSTUS mRNA 312605 313240 1 + . ID=LTnewLM_210015200.1;Parent=LTnewLM_210015200 LTnewLM_21 AUGUSTUS CDS 312605 313240 1 + 0 ID=LTnewLM_210015200.1:CDS:1;Parent=LTnewLM_210015200.1 ### LTnewLM_21 . polypeptide 312605 313240 . + . ID=LTnewLM_210015200.1:pep;Derives_from=LTnewLM_210015200.1;orthologous_to=LmjF.21.0845_mRNA;ortholog_cluster=OG0002148;product=term%3DPhosphoribosyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00156;Ontology_term=GO:0009116 LTnewLM_21 Pfam protein_match 312713 313159 . + . Parent=LTnewLM_210015200.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 ### LTnewLM_21 AUGUSTUS gene 315357 316073 1 + . ID=LTnewLM_210015300 LTnewLM_21 AUGUSTUS mRNA 315357 316073 1 + . ID=LTnewLM_210015300.1;Parent=LTnewLM_210015300 LTnewLM_21 AUGUSTUS CDS 315357 316073 1 + 0 ID=LTnewLM_210015300.1:CDS:1;Parent=LTnewLM_210015300.1 ### LTnewLM_21 . polypeptide 315357 316073 . + . ID=LTnewLM_210015300.1:pep;Derives_from=LTnewLM_210015300.1;orthologous_to=LmjF.21.0850_mRNA;ortholog_cluster=OG0002149;product=term%3DPhosphoribosyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00156;Ontology_term=GO:0009116 LTnewLM_21 Pfam protein_match 315591 315974 . + . Parent=LTnewLM_210015300.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 ### LTnewLM_21 AUGUSTUS gene 318481 325431 1 + . ID=LTnewLM_210015400 LTnewLM_21 AUGUSTUS mRNA 318481 325431 1 + . ID=LTnewLM_210015400.1;Parent=LTnewLM_210015400 LTnewLM_21 AUGUSTUS CDS 318481 319377 1 + 0 ID=LTnewLM_210015400.1:CDS:1;Parent=LTnewLM_210015400.1 LTnewLM_21 AUGUSTUS CDS 319423 325431 1 + 0 ID=LTnewLM_210015400.1:CDS:2;Parent=LTnewLM_210015400.1 ### LTnewLM_21 . polypeptide 318481 325431 . + . ID=LTnewLM_210015400.1:pep;Derives_from=LTnewLM_210015400.1;orthologous_to=LmjF.21.0853_mRNA;ortholog_cluster=OG0002150;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 318511 318912 . + . Parent=LTnewLM_210015400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 318523 318723 . + . Parent=LTnewLM_210015400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_21 Pfam protein_match 318811 319728 . + . Parent=LTnewLM_210015400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_21 Pfam protein_match 319423 319965 . + . Parent=LTnewLM_210015400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 319453 319752 . + . Parent=LTnewLM_210015400.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_21 AUGUSTUS gene 326189 327079 1 + . ID=LTnewLM_210015500 LTnewLM_21 AUGUSTUS mRNA 326189 327079 1 + . ID=LTnewLM_210015500.1;Parent=LTnewLM_210015500 LTnewLM_21 AUGUSTUS CDS 326189 327079 1 + 0 ID=LTnewLM_210015500.1:CDS:1;Parent=LTnewLM_210015500.1 ### LTnewLM_21 . polypeptide 326189 327079 . + . ID=LTnewLM_210015500.1:pep;Derives_from=LTnewLM_210015500.1;orthologous_to=LmjF.21.0855_mRNA;ortholog_cluster=OG0002151;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 328474 336416 0.45 + . ID=LTnewLM_210015600 LTnewLM_21 AUGUSTUS mRNA 328474 336416 0.45 + . ID=LTnewLM_210015600.1;Parent=LTnewLM_210015600 LTnewLM_21 AUGUSTUS CDS 328474 329620 0.61 + 0 ID=LTnewLM_210015600.1:CDS:1;Parent=LTnewLM_210015600.1 LTnewLM_21 AUGUSTUS CDS 329767 336416 0.47 + 2 ID=LTnewLM_210015600.1:CDS:2;Parent=LTnewLM_210015600.1 ### LTnewLM_21 . polypeptide 328474 336416 . + . ID=LTnewLM_210015600.1:pep;Derives_from=LTnewLM_210015600.1;orthologous_to=LmjF.21.0861_mRNA;ortholog_cluster=OG0002152;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 337081 339141 1 + . ID=LTnewLM_210015700 LTnewLM_21 AUGUSTUS mRNA 337081 339141 1 + . ID=LTnewLM_210015700.1;Parent=LTnewLM_210015700 LTnewLM_21 AUGUSTUS CDS 337081 339141 1 + 0 ID=LTnewLM_210015700.1:CDS:1;Parent=LTnewLM_210015700.1 ### LTnewLM_21 . polypeptide 337081 339141 . + . ID=LTnewLM_210015700.1:pep;Derives_from=LTnewLM_210015700.1;orthologous_to=LmjF.21.0865_mRNA;ortholog_cluster=OG0002153;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 344987 347737 1 + . ID=LTnewLM_210015800 LTnewLM_21 AUGUSTUS mRNA 344987 347737 1 + . ID=LTnewLM_210015800.1;Parent=LTnewLM_210015800 LTnewLM_21 AUGUSTUS CDS 344987 347737 1 + 0 ID=LTnewLM_210015800.1:CDS:1;Parent=LTnewLM_210015800.1 ### LTnewLM_21 . polypeptide 344987 347737 . + . ID=LTnewLM_210015800.1:pep;Derives_from=LTnewLM_210015800.1;orthologous_to=LmjF.21.0870_mRNA;ortholog_cluster=OG0002154;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 350099 352666 1 + . ID=LTnewLM_210015900 LTnewLM_21 AUGUSTUS mRNA 350099 352666 1 + . ID=LTnewLM_210015900.1;Parent=LTnewLM_210015900 LTnewLM_21 AUGUSTUS CDS 350099 352666 1 + 0 ID=LTnewLM_210015900.1:CDS:1;Parent=LTnewLM_210015900.1 ### LTnewLM_21 . polypeptide 350099 352666 . + . ID=LTnewLM_210015900.1:pep;Derives_from=LTnewLM_210015900.1;orthologous_to=LmjF.21.0873_mRNA;ortholog_cluster=OG0002155;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 353844 357680 1 + . ID=LTnewLM_210016000 LTnewLM_21 AUGUSTUS mRNA 353844 357680 1 + . ID=LTnewLM_210016000.1;Parent=LTnewLM_210016000 LTnewLM_21 AUGUSTUS CDS 353844 357680 1 + 0 ID=LTnewLM_210016000.1:CDS:1;Parent=LTnewLM_210016000.1 ### LTnewLM_21 . polypeptide 353844 357680 . + . ID=LTnewLM_210016000.1:pep;Derives_from=LTnewLM_210016000.1;orthologous_to=LmjF.21.0875_mRNA;ortholog_cluster=OG0002156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 359111 361957 1 + . ID=LTnewLM_210016100 LTnewLM_21 AUGUSTUS mRNA 359111 361957 1 + . ID=LTnewLM_210016100.1;Parent=LTnewLM_210016100 LTnewLM_21 AUGUSTUS CDS 359111 361957 1 + 0 ID=LTnewLM_210016100.1:CDS:1;Parent=LTnewLM_210016100.1 ### LTnewLM_21 . polypeptide 359111 361957 . + . ID=LTnewLM_210016100.1:pep;Derives_from=LTnewLM_210016100.1;orthologous_to=LmjF.21.0880_mRNA;ortholog_cluster=OG0002157;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_21 Pfam protein_match 359531 359926 . + . Parent=LTnewLM_210016100.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_21 Pfam protein_match 361010 361573 . + . Parent=LTnewLM_210016100.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 ### LTnewLM_21 AUGUSTUS gene 362855 363181 1 + . ID=LTnewLM_210016200 LTnewLM_21 AUGUSTUS mRNA 362855 363181 1 + . ID=LTnewLM_210016200.1;Parent=LTnewLM_210016200 LTnewLM_21 AUGUSTUS CDS 362855 363181 1 + 0 ID=LTnewLM_210016200.1:CDS:1;Parent=LTnewLM_210016200.1 ### LTnewLM_21 . polypeptide 362855 363181 . + . ID=LTnewLM_210016200.1:pep;Derives_from=LTnewLM_210016200.1;orthologous_to=LmjF.21.0882_mRNA;ortholog_cluster=OG0002158;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 364130 364741 1 + . ID=LTnewLM_210016300 LTnewLM_21 AUGUSTUS mRNA 364130 364741 1 + . ID=LTnewLM_210016300.1;Parent=LTnewLM_210016300 LTnewLM_21 AUGUSTUS CDS 364130 364741 1 + 0 ID=LTnewLM_210016300.1:CDS:1;Parent=LTnewLM_210016300.1 ### LTnewLM_21 . polypeptide 364130 364741 . + . ID=LTnewLM_210016300.1:pep;Derives_from=LTnewLM_210016300.1;orthologous_to=LmjF.21.0883_mRNA;ortholog_cluster=OG0002159;product=term%3DTransmembrane protein 254%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14934 LTnewLM_21 Pfam protein_match 364454 364657 . + . Parent=LTnewLM_210016300.1:pep;Name=PF14934;signature_desc=Transmembrane protein 254 ### LTnewLM_21 AUGUSTUS gene 365866 370554 1 + . ID=LTnewLM_210016400 LTnewLM_21 AUGUSTUS mRNA 365866 370554 1 + . ID=LTnewLM_210016400.1;Parent=LTnewLM_210016400 LTnewLM_21 AUGUSTUS CDS 365866 370554 1 + 0 ID=LTnewLM_210016400.1:CDS:1;Parent=LTnewLM_210016400.1 ### LTnewLM_21 . polypeptide 365866 370554 . + . ID=LTnewLM_210016400.1:pep;Derives_from=LTnewLM_210016400.1;orthologous_to=LmjF.21.0885_mRNA;ortholog_cluster=OG0002160;product=term%3DMutS domain III/MutS domain V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05192|Pfam:PF00488;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_21 Pfam protein_match 367825 369312 . + . Parent=LTnewLM_210016400.1:pep;Name=PF05192;signature_desc=MutS domain III;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_21 Pfam protein_match 369883 370500 . + . Parent=LTnewLM_210016400.1:pep;Name=PF00488;signature_desc=MutS domain V;Ontology_term=GO:0005524,GO:0030983,GO:0006298 ### LTnewLM_21 AUGUSTUS gene 371404 373536 1 + . ID=LTnewLM_210016500 LTnewLM_21 AUGUSTUS mRNA 371404 373536 1 + . ID=LTnewLM_210016500.1;Parent=LTnewLM_210016500 LTnewLM_21 AUGUSTUS CDS 371404 373536 1 + 0 ID=LTnewLM_210016500.1:CDS:1;Parent=LTnewLM_210016500.1 ### LTnewLM_21 . polypeptide 371404 373536 . + . ID=LTnewLM_210016500.1:pep;Derives_from=LTnewLM_210016500.1;orthologous_to=LmjF.21.0891_mRNA;ortholog_cluster=OG0002161;product=term%3DAdenylate cyclase associated (CAP) C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08603;Ontology_term=GO:0007010,GO:0003779 LTnewLM_21 Pfam protein_match 373033 373512 . + . Parent=LTnewLM_210016500.1:pep;Name=PF08603;signature_desc=Adenylate cyclase associated (CAP) C terminal;Ontology_term=GO:0003779,GO:0007010 ### LTnewLM_21 AUGUSTUS gene 375421 377346 1 + . ID=LTnewLM_210016600 LTnewLM_21 AUGUSTUS mRNA 375421 377346 1 + . ID=LTnewLM_210016600.1;Parent=LTnewLM_210016600 LTnewLM_21 AUGUSTUS CDS 375421 377346 1 + 0 ID=LTnewLM_210016600.1:CDS:1;Parent=LTnewLM_210016600.1 ### LTnewLM_21 . polypeptide 375421 377346 . + . ID=LTnewLM_210016600.1:pep;Derives_from=LTnewLM_210016600.1;orthologous_to=LmjF.21.0895_mRNA;ortholog_cluster=OG0002162;product=term%3DOB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF00152;Ontology_term=GO:0004812,GO:0005524,GO:0000166,GO:0003676,GO:0006418 LTnewLM_21 Pfam protein_match 375829 376059 . + . Parent=LTnewLM_210016600.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 LTnewLM_21 Pfam protein_match 376129 377322 . + . Parent=LTnewLM_210016600.1:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_21 AUGUSTUS gene 378285 379562 1 + . ID=LTnewLM_210016700 LTnewLM_21 AUGUSTUS mRNA 378285 379562 1 + . ID=LTnewLM_210016700.1;Parent=LTnewLM_210016700 LTnewLM_21 AUGUSTUS CDS 378285 379562 1 + 0 ID=LTnewLM_210016700.1:CDS:1;Parent=LTnewLM_210016700.1 ### LTnewLM_21 . polypeptide 378285 379562 . + . ID=LTnewLM_210016700.1:pep;Derives_from=LTnewLM_210016700.1;orthologous_to=LmjF.21.0901_mRNA;ortholog_cluster=OG0002163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 380027 381373 1 + . ID=LTnewLM_210016800 LTnewLM_21 AUGUSTUS mRNA 380027 381373 1 + . ID=LTnewLM_210016800.1;Parent=LTnewLM_210016800 LTnewLM_21 AUGUSTUS CDS 380027 381373 1 + 0 ID=LTnewLM_210016800.1:CDS:1;Parent=LTnewLM_210016800.1 ### LTnewLM_21 . polypeptide 380027 381373 . + . ID=LTnewLM_210016800.1:pep;Derives_from=LTnewLM_210016800.1;orthologous_to=LmjF.21.0905_mRNA;ortholog_cluster=OG0002164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 381661 382800 0.97 + . ID=LTnewLM_210016900 LTnewLM_21 AUGUSTUS mRNA 381661 382800 0.97 + . ID=LTnewLM_210016900.1;Parent=LTnewLM_210016900 LTnewLM_21 AUGUSTUS CDS 381661 381681 0.97 + 0 ID=LTnewLM_210016900.1:CDS:1;Parent=LTnewLM_210016900.1 LTnewLM_21 AUGUSTUS CDS 381961 382800 0.97 + 0 ID=LTnewLM_210016900.1:CDS:2;Parent=LTnewLM_210016900.1 ### LTnewLM_21 . polypeptide 381661 382800 . + . ID=LTnewLM_210016900.1:pep;Derives_from=LTnewLM_210016900.1;orthologous_to=LmjF.21.0910_mRNA;ortholog_cluster=OG0002165;product=term%3DAminoacyl-tRNA editing domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04073;Ontology_term=GO:0002161 LTnewLM_21 Pfam protein_match 382081 382446 . + . Parent=LTnewLM_210016900.1:pep;Name=PF04073;signature_desc=Aminoacyl-tRNA editing domain;Ontology_term=GO:0002161 ### LTnewLM_21 AUGUSTUS gene 383544 383942 1 + . ID=LTnewLM_210017000 LTnewLM_21 AUGUSTUS mRNA 383544 383942 1 + . ID=LTnewLM_210017000.1;Parent=LTnewLM_210017000 LTnewLM_21 AUGUSTUS CDS 383544 383942 1 + 0 ID=LTnewLM_210017000.1:CDS:1;Parent=LTnewLM_210017000.1 ### LTnewLM_21 . polypeptide 383544 383942 . + . ID=LTnewLM_210017000.1:pep;Derives_from=LTnewLM_210017000.1;orthologous_to=LTnewLM_210017100.1,LTnewLM_210017200.1,LTnewLM_290024800.1,LTnewLM_290024900.1,LTnewLM_290025000.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DC-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16211 LTnewLM_21 Pfam protein_match 383835 383915 . + . Parent=LTnewLM_210017000.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_21 AUGUSTUS gene 384589 384987 1 + . ID=LTnewLM_210017100 LTnewLM_21 AUGUSTUS mRNA 384589 384987 1 + . ID=LTnewLM_210017100.1;Parent=LTnewLM_210017100 LTnewLM_21 AUGUSTUS CDS 384589 384987 1 + 0 ID=LTnewLM_210017100.1:CDS:1;Parent=LTnewLM_210017100.1 ### LTnewLM_21 . polypeptide 384589 384987 . + . ID=LTnewLM_210017100.1:pep;Derives_from=LTnewLM_210017100.1;orthologous_to=LTnewLM_210017000.1,LTnewLM_210017200.1,LTnewLM_290024800.1,LTnewLM_290024900.1,LTnewLM_290025000.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DCore histone H2A/H2B/H3/H4/C-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF16211;Ontology_term=GO:0003677 LTnewLM_21 Pfam protein_match 384604 384858 . + . Parent=LTnewLM_210017100.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_21 Pfam protein_match 384880 384960 . + . Parent=LTnewLM_210017100.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_21 AUGUSTUS gene 385639 386037 1 + . ID=LTnewLM_210017200 LTnewLM_21 AUGUSTUS mRNA 385639 386037 1 + . ID=LTnewLM_210017200.1;Parent=LTnewLM_210017200 LTnewLM_21 AUGUSTUS CDS 385639 386037 1 + 0 ID=LTnewLM_210017200.1:CDS:1;Parent=LTnewLM_210017200.1 ### LTnewLM_21 . polypeptide 385639 386037 . + . ID=LTnewLM_210017200.1:pep;Derives_from=LTnewLM_210017200.1;orthologous_to=LTnewLM_210017000.1,LTnewLM_210017100.1,LTnewLM_290024800.1,LTnewLM_290024900.1,LTnewLM_290025000.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DCore histone H2A/H2B/H3/H4/C-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125|Pfam:PF16211;Ontology_term=GO:0003677 LTnewLM_21 Pfam protein_match 385654 385908 . + . Parent=LTnewLM_210017200.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 LTnewLM_21 Pfam protein_match 385921 386016 . + . Parent=LTnewLM_210017200.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_21 . pseudogene 387286 389924 . + . ID=LTnewLM_210017300:pseudogene;coverage=0.959;sequence_ID=0.886;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.0940_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 387286 389924 . + . ID=LTnewLM_210017300.1;Parent=LTnewLM_210017300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 388578 389924 . + . ID=LTnewLM_210017300.1:pseudogenic_exon:1;Parent=LTnewLM_210017300.1;extra_copy_number=0 LTnewLM_21 . pseudogenic_transcript 388791 389924 . + . ID=LTnewLM_210017300.2;Parent=LTnewLM_210017300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 388878 389924 . + . ID=LTnewLM_210017300.2:pseudogenic_exon:1;Parent=LTnewLM_210017300.2;extra_copy_number=0 ### LTnewLM_21 . polypeptide 388578 389924 . + . ID=LTnewLM_210017300.1:pep;Derives_from=LTnewLM_210017300.1;orthologous_to=LTnewLM_210017300.2,LmjF.21.0940.1_mRNA,LmjF.21.0940.2_mRNA;ortholog_cluster=OG0000286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 388878 389924 . + . ID=LTnewLM_210017300.2:pep;Derives_from=LTnewLM_210017300.2;orthologous_to=LTnewLM_210017300.1,LmjF.21.0940.1_mRNA,LmjF.21.0940.2_mRNA;ortholog_cluster=OG0000286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 391533 392870 1 + . ID=LTnewLM_210017400 LTnewLM_21 AUGUSTUS mRNA 391533 392870 1 + . ID=LTnewLM_210017400.1;Parent=LTnewLM_210017400 LTnewLM_21 AUGUSTUS CDS 391533 392870 1 + 0 ID=LTnewLM_210017400.1:CDS:1;Parent=LTnewLM_210017400.1 ### LTnewLM_21 . polypeptide 391533 392870 . + . ID=LTnewLM_210017400.1:pep;Derives_from=LTnewLM_210017400.1;orthologous_to=LmjF.21.0950_mRNA;ortholog_cluster=OG0002166;product=term%3DProgrammed cell death protein 2%2C C-terminal putative domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04194;Ontology_term=GO:0005737 LTnewLM_21 Pfam protein_match 392136 392684 . + . Parent=LTnewLM_210017400.1:pep;Name=PF04194;signature_desc=Programmed cell death protein 2%2C C-terminal putative domain;Ontology_term=GO:0005737 ### LTnewLM_21 . pseudogene 394174 398516 . + . ID=LTnewLM_210017500:pseudogene;coverage=0.997;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.0960_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 394174 398516 . + . ID=LTnewLM_210017500.1;Parent=LTnewLM_210017500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 394174 398516 . + . ID=LTnewLM_210017500.1:pseudogenic_exon:1;Parent=LTnewLM_210017500.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 394174 398516 . + . ID=LTnewLM_210017500.1:pep;Derives_from=LTnewLM_210017500.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 399407 401545 1 + . ID=LTnewLM_210017600 LTnewLM_21 AUGUSTUS mRNA 399407 401545 1 + . ID=LTnewLM_210017600.1;Parent=LTnewLM_210017600 LTnewLM_21 AUGUSTUS CDS 399407 401545 1 + 0 ID=LTnewLM_210017600.1:CDS:1;Parent=LTnewLM_210017600.1 ### LTnewLM_21 . polypeptide 399407 401545 . + . ID=LTnewLM_210017600.1:pep;Derives_from=LTnewLM_210017600.1;orthologous_to=LmjF.21.0970_mRNA;ortholog_cluster=OG0002167;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 402516 407918 1 + . ID=LTnewLM_210017700 LTnewLM_21 AUGUSTUS mRNA 402516 407918 1 + . ID=LTnewLM_210017700.1;Parent=LTnewLM_210017700 LTnewLM_21 AUGUSTUS CDS 402516 407918 1 + 0 ID=LTnewLM_210017700.1:CDS:1;Parent=LTnewLM_210017700.1 ### LTnewLM_21 . polypeptide 402516 407918 . + . ID=LTnewLM_210017700.1:pep;Derives_from=LTnewLM_210017700.1;orthologous_to=LmjF.21.0980_mRNA;ortholog_cluster=OG0002168;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 409324 409752 1 + . ID=LTnewLM_210017800 LTnewLM_21 AUGUSTUS mRNA 409324 409752 1 + . ID=LTnewLM_210017800.1;Parent=LTnewLM_210017800 LTnewLM_21 AUGUSTUS CDS 409324 409752 1 + 0 ID=LTnewLM_210017800.1:CDS:1;Parent=LTnewLM_210017800.1 ### LTnewLM_21 . polypeptide 409324 409752 . + . ID=LTnewLM_210017800.1:pep;Derives_from=LTnewLM_210017800.1;orthologous_to=LmjF.21.0990_mRNA;ortholog_cluster=OG0002169;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 410741 416893 . + . ID=LTnewLM_210017900:pseudogene;coverage=0.993;sequence_ID=0.910;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1000_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 410741 416893 . + . ID=LTnewLM_210017900.1;Parent=LTnewLM_210017900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 410741 416893 . + . ID=LTnewLM_210017900.1:pseudogenic_exon:1;Parent=LTnewLM_210017900.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 410741 416893 . + . ID=LTnewLM_210017900.1:pep;Derives_from=LTnewLM_210017900.1;orthologous_to=LmjF.21.1000_mRNA;ortholog_cluster=OG0007502;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 418165 419577 1 + . ID=LTnewLM_210018000 LTnewLM_21 AUGUSTUS mRNA 418165 419577 1 + . ID=LTnewLM_210018000.1;Parent=LTnewLM_210018000 LTnewLM_21 AUGUSTUS CDS 418165 419577 1 + 0 ID=LTnewLM_210018000.1:CDS:1;Parent=LTnewLM_210018000.1 ### LTnewLM_21 . polypeptide 418165 419577 . + . ID=LTnewLM_210018000.1:pep;Derives_from=LTnewLM_210018000.1;orthologous_to=LmjF.21.1010_mRNA;ortholog_cluster=OG0002170;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_21 Pfam protein_match 418174 418773 . + . Parent=LTnewLM_210018000.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_21 Pfam protein_match 419002 419382 . + . Parent=LTnewLM_210018000.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_21 AUGUSTUS gene 420243 421190 1 + . ID=LTnewLM_210018100 LTnewLM_21 AUGUSTUS mRNA 420243 421190 1 + . ID=LTnewLM_210018100.1;Parent=LTnewLM_210018100 LTnewLM_21 AUGUSTUS CDS 420243 421190 1 + 0 ID=LTnewLM_210018100.1:CDS:1;Parent=LTnewLM_210018100.1 ### LTnewLM_21 . polypeptide 420243 421190 . + . ID=LTnewLM_210018100.1:pep;Derives_from=LTnewLM_210018100.1;orthologous_to=LmjF.21.1020_mRNA;ortholog_cluster=OG0002171;product=term%3DAxonemal dynein light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10211 LTnewLM_21 Pfam protein_match 420600 421157 . + . Parent=LTnewLM_210018100.1:pep;Name=PF10211;signature_desc=Axonemal dynein light chain ### LTnewLM_21 AUGUSTUS gene 422886 425342 1 + . ID=LTnewLM_210018200 LTnewLM_21 AUGUSTUS mRNA 422886 425342 1 + . ID=LTnewLM_210018200.1;Parent=LTnewLM_210018200 LTnewLM_21 AUGUSTUS CDS 422886 425342 1 + 0 ID=LTnewLM_210018200.1:CDS:1;Parent=LTnewLM_210018200.1 ### LTnewLM_21 . polypeptide 422886 425342 . + . ID=LTnewLM_210018200.1:pep;Derives_from=LTnewLM_210018200.1;orthologous_to=LmjF.21.1030_mRNA;ortholog_cluster=OG0002172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 427715 434104 1 + . ID=LTnewLM_210018300 LTnewLM_21 AUGUSTUS mRNA 427715 434104 1 + . ID=LTnewLM_210018300.1;Parent=LTnewLM_210018300 LTnewLM_21 AUGUSTUS CDS 427715 434104 1 + 0 ID=LTnewLM_210018300.1:CDS:1;Parent=LTnewLM_210018300.1 ### LTnewLM_21 . polypeptide 427715 434104 . + . ID=LTnewLM_210018300.1:pep;Derives_from=LTnewLM_210018300.1;orthologous_to=LmjF.21.1040_mRNA;ortholog_cluster=OG0002173;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_21 Pfam protein_match 428261 428539 . + . Parent=LTnewLM_210018300.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_21 Pfam protein_match 428261 429115 . + . Parent=LTnewLM_210018300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_21 AUGUSTUS gene 436399 436971 1 + . ID=LTnewLM_210018400 LTnewLM_21 AUGUSTUS mRNA 436399 436971 1 + . ID=LTnewLM_210018400.1;Parent=LTnewLM_210018400 LTnewLM_21 AUGUSTUS CDS 436399 436971 1 + 0 ID=LTnewLM_210018400.1:CDS:1;Parent=LTnewLM_210018400.1 ### LTnewLM_21 . polypeptide 436399 436971 . + . ID=LTnewLM_210018400.1:pep;Derives_from=LTnewLM_210018400.1;orthologous_to=LTnewLM_300041200.1,LmjF.21.1050_mRNA,LmjF.30.3340_mRNA;ortholog_cluster=OG0000153;product=term%3DRibosomal protein L6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00347;Ontology_term=GO:0005840,GO:0019843,GO:0003735,GO:0006412 LTnewLM_21 Pfam protein_match 436432 436653 . + . Parent=LTnewLM_210018400.1:pep;Name=PF00347;signature_desc=Ribosomal protein L6;Ontology_term=GO:0003735,GO:0019843,GO:0006412,GO:0005840 LTnewLM_21 Pfam protein_match 436690 436926 . + . Parent=LTnewLM_210018400.1:pep;Name=PF00347;signature_desc=Ribosomal protein L6;Ontology_term=GO:0003735,GO:0019843,GO:0006412,GO:0005840 ### LTnewLM_21 AUGUSTUS gene 438175 438606 1 + . ID=LTnewLM_210018500 LTnewLM_21 AUGUSTUS mRNA 438175 438606 1 + . ID=LTnewLM_210018500.1;Parent=LTnewLM_210018500 LTnewLM_21 AUGUSTUS CDS 438175 438606 1 + 0 ID=LTnewLM_210018500.1:CDS:1;Parent=LTnewLM_210018500.1 ### LTnewLM_21 . polypeptide 438175 438606 . + . ID=LTnewLM_210018500.1:pep;Derives_from=LTnewLM_210018500.1;orthologous_to=LTnewLM_210018600.1,LmjF.21.1060_mRNA,LmjF.21.1070_mRNA;ortholog_cluster=OG0000154;product=term%3DRibosomal protein S12/S23%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00164;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 438265 438597 . + . Parent=LTnewLM_210018500.1:pep;Name=PF00164;signature_desc=Ribosomal protein S12/S23;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 AUGUSTUS gene 439504 439935 1 + . ID=LTnewLM_210018600 LTnewLM_21 AUGUSTUS mRNA 439504 439935 1 + . ID=LTnewLM_210018600.1;Parent=LTnewLM_210018600 LTnewLM_21 AUGUSTUS CDS 439504 439935 1 + 0 ID=LTnewLM_210018600.1:CDS:1;Parent=LTnewLM_210018600.1 ### LTnewLM_21 . polypeptide 439504 439935 . + . ID=LTnewLM_210018600.1:pep;Derives_from=LTnewLM_210018600.1;orthologous_to=LTnewLM_210018500.1,LmjF.21.1060_mRNA,LmjF.21.1070_mRNA;ortholog_cluster=OG0000154;product=term%3DRibosomal protein S12/S23%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00164;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 439594 439926 . + . Parent=LTnewLM_210018600.1:pep;Name=PF00164;signature_desc=Ribosomal protein S12/S23;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 AUGUSTUS gene 442774 443679 1 + . ID=LTnewLM_210018700 LTnewLM_21 AUGUSTUS mRNA 442774 443679 1 + . ID=LTnewLM_210018700.1;Parent=LTnewLM_210018700 LTnewLM_21 AUGUSTUS CDS 442774 443679 1 + 0 ID=LTnewLM_210018700.1:CDS:1;Parent=LTnewLM_210018700.1 ### LTnewLM_21 . polypeptide 442774 443679 . + . ID=LTnewLM_210018700.1:pep;Derives_from=LTnewLM_210018700.1;orthologous_to=LmjF.21.1080_mRNA;ortholog_cluster=OG0002174;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 442786 443661 . + . Parent=LTnewLM_210018700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 442792 443391 . + . Parent=LTnewLM_210018700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_21 AUGUSTUS gene 445412 447067 1 + . ID=LTnewLM_210018800 LTnewLM_21 AUGUSTUS mRNA 445412 447067 1 + . ID=LTnewLM_210018800.1;Parent=LTnewLM_210018800 LTnewLM_21 AUGUSTUS CDS 445412 447067 1 + 0 ID=LTnewLM_210018800.1:CDS:1;Parent=LTnewLM_210018800.1 ### LTnewLM_21 . polypeptide 445412 447067 . + . ID=LTnewLM_210018800.1:pep;Derives_from=LTnewLM_210018800.1;orthologous_to=LmjF.21.1090_mRNA;ortholog_cluster=OG0002175;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_21 Pfam protein_match 445541 447055 . + . Parent=LTnewLM_210018800.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_21 Liftoff gene 447848 447966 . + . ID=LTnewLM_210018900;coverage=1.0;sequence_ID=0.966;extra_copy_number=0;copy_num_ID=LmjF.11.5SRRNA.03_0 LTnewLM_21 Liftoff rRNA 447848 447966 . + . ID=LTnewLM_210018900:rRNA;Parent=LTnewLM_210018900;extra_copy_number=0 ### LTnewLM_21 GenomeTools gene 447849 447967 93.8 + . ID=LTnewLM_210019000 LTnewLM_21 INFERNAL rRNA 447849 447967 93.8 + . ID=LTnewLM_210019000:rRNA;Parent=LTnewLM_210019000;gc=0.50;evalue=1.7e-20;score=93.8;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_21 Aragorn_1.2.36 gene 448052 448123 . + . ID=LTnewLM_210019100 LTnewLM_21 Aragorn_1.2.36 tRNA 448052 448123 . + . ID=LTnewLM_210019100:tRNA;Parent=LTnewLM_210019100;aa=Pro;anticodon=agg;gc_content=61.1 ### LTnewLM_21 Aragorn_1.2.36 gene 448255 448329 . + . ID=LTnewLM_210019200 LTnewLM_21 Aragorn_1.2.36 tRNA 448255 448329 . + . ID=LTnewLM_210019200:tRNA;Parent=LTnewLM_210019200;aa=Val;anticodon=aac;gc_content=58.7 ### LTnewLM_21 Aragorn_1.2.36 gene 448392 448465 . + . ID=LTnewLM_210019300 LTnewLM_21 Aragorn_1.2.36 tRNA 448392 448465 . + . ID=LTnewLM_210019300:tRNA;Parent=LTnewLM_210019300;aa=Lys;anticodon=ctt;gc_content=62.2 ### LTnewLM_21 AUGUSTUS gene 448704 450788 1 - . ID=LTnewLM_210019400 LTnewLM_21 AUGUSTUS mRNA 448704 450788 1 - . ID=LTnewLM_210019400.1;Parent=LTnewLM_210019400 LTnewLM_21 AUGUSTUS CDS 448704 450788 1 - 0 ID=LTnewLM_210019400.1:CDS:1;Parent=LTnewLM_210019400.1 ### LTnewLM_21 . polypeptide 448704 450788 . - . ID=LTnewLM_210019400.1:pep;Derives_from=LTnewLM_210019400.1;orthologous_to=LmjF.21.1100_mRNA;ortholog_cluster=OG0002176;product=term%3DRNA polymerase III transcription factor (TF)IIIC subunit HTH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09734 LTnewLM_21 Pfam protein_match 449274 449804 . - . Parent=LTnewLM_210019400.1:pep;Name=PF09734;signature_desc=RNA polymerase III transcription factor (TF)IIIC subunit HTH domain ### LTnewLM_21 AUGUSTUS gene 452101 457341 1 - . ID=LTnewLM_210019500 LTnewLM_21 AUGUSTUS mRNA 452101 457341 1 - . ID=LTnewLM_210019500.1;Parent=LTnewLM_210019500 LTnewLM_21 AUGUSTUS CDS 452101 457341 1 - 0 ID=LTnewLM_210019500.1:CDS:1;Parent=LTnewLM_210019500.1 ### LTnewLM_21 . polypeptide 452101 457341 . - . ID=LTnewLM_210019500.1:pep;Derives_from=LTnewLM_210019500.1;orthologous_to=LmjF.21.1110_mRNA;ortholog_cluster=OG0002177;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 452242 452289 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 452362 452412 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 452887 452925 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 453406 453456 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 454213 454260 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 454423 454476 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 454921 454971 . - . Parent=LTnewLM_210019500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 458119 459951 1 - . ID=LTnewLM_210019600 LTnewLM_21 AUGUSTUS mRNA 458119 459951 1 - . ID=LTnewLM_210019600.1;Parent=LTnewLM_210019600 LTnewLM_21 AUGUSTUS CDS 458119 459951 1 - 0 ID=LTnewLM_210019600.1:CDS:1;Parent=LTnewLM_210019600.1 ### LTnewLM_21 . polypeptide 458119 459951 . - . ID=LTnewLM_210019600.1:pep;Derives_from=LTnewLM_210019600.1;orthologous_to=LmjF.21.1120_mRNA;ortholog_cluster=OG0002178;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 458599 458733 . - . Parent=LTnewLM_210019600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 458809 458901 . - . Parent=LTnewLM_210019600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 460626 462515 1 - . ID=LTnewLM_210019700 LTnewLM_21 AUGUSTUS mRNA 460626 462515 1 - . ID=LTnewLM_210019700.1;Parent=LTnewLM_210019700 LTnewLM_21 AUGUSTUS CDS 460626 462515 1 - 0 ID=LTnewLM_210019700.1:CDS:1;Parent=LTnewLM_210019700.1 ### LTnewLM_21 . polypeptide 460626 462515 . - . ID=LTnewLM_210019700.1:pep;Derives_from=LTnewLM_210019700.1;orthologous_to=LmjF.21.1130_mRNA;ortholog_cluster=OG0002179;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 463220 464131 1 - . ID=LTnewLM_210019800 LTnewLM_21 AUGUSTUS mRNA 463220 464131 1 - . ID=LTnewLM_210019800.1;Parent=LTnewLM_210019800 LTnewLM_21 AUGUSTUS CDS 463220 464131 1 - 0 ID=LTnewLM_210019800.1:CDS:1;Parent=LTnewLM_210019800.1 ### LTnewLM_21 . polypeptide 463220 464131 . - . ID=LTnewLM_210019800.1:pep;Derives_from=LTnewLM_210019800.1;orthologous_to=LmjF.21.1140_mRNA;ortholog_cluster=OG0002180;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 465209 470476 1 - . ID=LTnewLM_210019900 LTnewLM_21 AUGUSTUS mRNA 465209 470476 1 - . ID=LTnewLM_210019900.1;Parent=LTnewLM_210019900 LTnewLM_21 AUGUSTUS CDS 465209 470476 1 - 0 ID=LTnewLM_210019900.1:CDS:1;Parent=LTnewLM_210019900.1 ### LTnewLM_21 . polypeptide 465209 470476 . - . ID=LTnewLM_210019900.1:pep;Derives_from=LTnewLM_210019900.1;orthologous_to=LmjF.21.1150_mRNA;ortholog_cluster=OG0002181;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 475180 478578 1 - . ID=LTnewLM_210020000 LTnewLM_21 AUGUSTUS mRNA 475180 478578 1 - . ID=LTnewLM_210020000.1;Parent=LTnewLM_210020000 LTnewLM_21 AUGUSTUS CDS 475180 478578 1 - 0 ID=LTnewLM_210020000.1:CDS:1;Parent=LTnewLM_210020000.1 ### LTnewLM_21 . polypeptide 475180 478578 . - . ID=LTnewLM_210020000.1:pep;Derives_from=LTnewLM_210020000.1;orthologous_to=LmjF.21.1160_mRNA;ortholog_cluster=OG0002182;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 483056 484489 1 - . ID=LTnewLM_210020100 LTnewLM_21 AUGUSTUS mRNA 483056 484489 1 - . ID=LTnewLM_210020100.1;Parent=LTnewLM_210020100 LTnewLM_21 AUGUSTUS CDS 483056 484489 1 - 0 ID=LTnewLM_210020100.1:CDS:1;Parent=LTnewLM_210020100.1 ### LTnewLM_21 . polypeptide 483056 484489 . - . ID=LTnewLM_210020100.1:pep;Derives_from=LTnewLM_210020100.1;orthologous_to=LmjF.21.1170_mRNA;ortholog_cluster=OG0002183;product=term%3DLeucine Rich Repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00560;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 483959 484012 . - . Parent=LTnewLM_210020100.1:pep;Name=PF00560;signature_desc=Leucine Rich Repeat;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 485715 486512 1 - . ID=LTnewLM_210020200 LTnewLM_21 AUGUSTUS mRNA 485715 486512 1 - . ID=LTnewLM_210020200.1;Parent=LTnewLM_210020200 LTnewLM_21 AUGUSTUS CDS 485715 486512 1 - 0 ID=LTnewLM_210020200.1:CDS:1;Parent=LTnewLM_210020200.1 ### LTnewLM_21 . polypeptide 485715 486512 . - . ID=LTnewLM_210020200.1:pep;Derives_from=LTnewLM_210020200.1;orthologous_to=LmjF.21.1180_mRNA;ortholog_cluster=OG0002184;product=term%3DRibosomal protein L1p/L10e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00687 LTnewLM_21 Pfam protein_match 485757 486332 . - . Parent=LTnewLM_210020200.1:pep;Name=PF00687;signature_desc=Ribosomal protein L1p/L10e family ### LTnewLM_21 AUGUSTUS gene 487389 489749 1 - . ID=LTnewLM_210020300 LTnewLM_21 AUGUSTUS mRNA 487389 489749 1 - . ID=LTnewLM_210020300.1;Parent=LTnewLM_210020300 LTnewLM_21 AUGUSTUS CDS 487389 489749 1 - 0 ID=LTnewLM_210020300.1:CDS:1;Parent=LTnewLM_210020300.1 ### LTnewLM_21 . polypeptide 487389 489749 . - . ID=LTnewLM_210020300.1:pep;Derives_from=LTnewLM_210020300.1;orthologous_to=LmjF.21.1190_mRNA;ortholog_cluster=OG0002185;product=term%3DAAA domain/PIF1-like helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13604|Pfam:PF13245|Pfam:PF05970;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_21 Pfam protein_match 488331 488795 . - . Parent=LTnewLM_210020300.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_21 Pfam protein_match 488439 488990 . - . Parent=LTnewLM_210020300.1:pep;Name=PF13245;signature_desc=AAA domain LTnewLM_21 Pfam protein_match 488571 488999 . - . Parent=LTnewLM_210020300.1:pep;Name=PF13604;signature_desc=AAA domain ### LTnewLM_21 AUGUSTUS gene 491110 491991 1 - . ID=LTnewLM_210020400 LTnewLM_21 AUGUSTUS mRNA 491110 491991 1 - . ID=LTnewLM_210020400.1;Parent=LTnewLM_210020400 LTnewLM_21 AUGUSTUS CDS 491110 491991 1 - 0 ID=LTnewLM_210020400.1:CDS:1;Parent=LTnewLM_210020400.1 ### LTnewLM_21 . polypeptide 491110 491991 . - . ID=LTnewLM_210020400.1:pep;Derives_from=LTnewLM_210020400.1;orthologous_to=LmjF.21.1200_mRNA;ortholog_cluster=OG0002186;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 493673 494527 1 - . ID=LTnewLM_210020500 LTnewLM_21 AUGUSTUS mRNA 493673 494527 1 - . ID=LTnewLM_210020500.1;Parent=LTnewLM_210020500 LTnewLM_21 AUGUSTUS CDS 493673 494527 1 - 0 ID=LTnewLM_210020500.1:CDS:1;Parent=LTnewLM_210020500.1 ### LTnewLM_21 . polypeptide 493673 494527 . - . ID=LTnewLM_210020500.1:pep;Derives_from=LTnewLM_210020500.1;orthologous_to=LmjF.21.1210_mRNA;ortholog_cluster=OG0002187;product=term%3DThymidine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00265;Ontology_term=GO:0004797,GO:0005524 LTnewLM_21 Pfam protein_match 494000 494518 . - . Parent=LTnewLM_210020500.1:pep;Name=PF00265;signature_desc=Thymidine kinase;Ontology_term=GO:0004797,GO:0005524 ### LTnewLM_21 AUGUSTUS gene 495985 500331 1 - . ID=LTnewLM_210020600 LTnewLM_21 AUGUSTUS mRNA 495985 500331 1 - . ID=LTnewLM_210020600.1;Parent=LTnewLM_210020600 LTnewLM_21 AUGUSTUS CDS 495985 500331 1 - 0 ID=LTnewLM_210020600.1:CDS:1;Parent=LTnewLM_210020600.1 ### LTnewLM_21 . polypeptide 495985 500331 . - . ID=LTnewLM_210020600.1:pep;Derives_from=LTnewLM_210020600.1;orthologous_to=LmjF.21.1220_mRNA;ortholog_cluster=OG0002188;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 503777 505704 . - . ID=LTnewLM_210020700:pseudogene;coverage=0.999;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1230_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 503777 505704 . - . ID=LTnewLM_210020700.1;Parent=LTnewLM_210020700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 503777 505704 . - . ID=LTnewLM_210020700.1:pseudogenic_exon:1;Parent=LTnewLM_210020700.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 503777 505704 . - . ID=LTnewLM_210020700.1:pep;Derives_from=LTnewLM_210020700.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 507556 511338 1 - . ID=LTnewLM_210020800 LTnewLM_21 AUGUSTUS mRNA 507556 511338 1 - . ID=LTnewLM_210020800.1;Parent=LTnewLM_210020800 LTnewLM_21 AUGUSTUS CDS 507556 511338 1 - 0 ID=LTnewLM_210020800.1:CDS:1;Parent=LTnewLM_210020800.1 ### LTnewLM_21 . polypeptide 507556 511338 . - . ID=LTnewLM_210020800.1:pep;Derives_from=LTnewLM_210020800.1;orthologous_to=LTnewLM_330041000.1,LmjF.21.1230_mRNA,LmjF.21.1240_mRNA;ortholog_cluster=OG0000155;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 510463 510570 . - . Parent=LTnewLM_210020800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 510613 510729 . - . Parent=LTnewLM_210020800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 514501 515475 1 - . ID=LTnewLM_210020900 LTnewLM_21 AUGUSTUS mRNA 514501 515475 1 - . ID=LTnewLM_210020900.1;Parent=LTnewLM_210020900 LTnewLM_21 AUGUSTUS CDS 514501 515475 1 - 0 ID=LTnewLM_210020900.1:CDS:1;Parent=LTnewLM_210020900.1 ### LTnewLM_21 . polypeptide 514501 515475 . - . ID=LTnewLM_210020900.1:pep;Derives_from=LTnewLM_210020900.1;orthologous_to=LmjF.21.1250_mRNA;ortholog_cluster=OG0002189;product=term%3DAdenylate kinase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00406|Pfam:PF13207 LTnewLM_21 Pfam protein_match 514594 515142 . - . Parent=LTnewLM_210020900.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_21 Pfam protein_match 514762 515136 . - . Parent=LTnewLM_210020900.1:pep;Name=PF13207;signature_desc=AAA domain ### LTnewLM_21 AUGUSTUS gene 516917 518410 1 - . ID=LTnewLM_210021000 LTnewLM_21 AUGUSTUS mRNA 516917 518410 1 - . ID=LTnewLM_210021000.1;Parent=LTnewLM_210021000 LTnewLM_21 AUGUSTUS CDS 516917 518410 1 - 0 ID=LTnewLM_210021000.1:CDS:1;Parent=LTnewLM_210021000.1 ### LTnewLM_21 . polypeptide 516917 518410 . - . ID=LTnewLM_210021000.1:pep;Derives_from=LTnewLM_210021000.1;orthologous_to=LmjF.21.1260_mRNA;ortholog_cluster=OG0002190;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_21 Pfam protein_match 518072 518125 . - . Parent=LTnewLM_210021000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_21 Pfam protein_match 518180 518221 . - . Parent=LTnewLM_210021000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_21 Pfam protein_match 518249 518305 . - . Parent=LTnewLM_210021000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_21 Liftoff gene 520204 522789 . - . ID=LTnewLM_210021100;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1270_0 LTnewLM_21 Liftoff mRNA 520204 522789 . - . ID=LTnewLM_210021100.1;Parent=LTnewLM_210021100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 520204 522789 . - 0 ID=LTnewLM_210021100.1:CDS:1;Parent=LTnewLM_210021100.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 520204 522789 . - . ID=LTnewLM_210021100.1:pep;Derives_from=LTnewLM_210021100.1;orthologous_to=LmjF.21.1270_mRNA;ortholog_cluster=OG0002191;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 526581 528446 1 - . ID=LTnewLM_210021200 LTnewLM_21 AUGUSTUS mRNA 526581 528446 1 - . ID=LTnewLM_210021200.1;Parent=LTnewLM_210021200 LTnewLM_21 AUGUSTUS CDS 526581 528446 1 - 0 ID=LTnewLM_210021200.1:CDS:1;Parent=LTnewLM_210021200.1 ### LTnewLM_21 . polypeptide 526581 528446 . - . ID=LTnewLM_210021200.1:pep;Derives_from=LTnewLM_210021200.1;orthologous_to=LmjF.21.1280_mRNA;ortholog_cluster=OG0002192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 530187 530960 1 - . ID=LTnewLM_210021300 LTnewLM_21 AUGUSTUS mRNA 530187 530960 1 - . ID=LTnewLM_210021300.1;Parent=LTnewLM_210021300 LTnewLM_21 AUGUSTUS CDS 530187 530960 1 - 0 ID=LTnewLM_210021300.1:CDS:1;Parent=LTnewLM_210021300.1 ### LTnewLM_21 . polypeptide 530187 530960 . - . ID=LTnewLM_210021300.1:pep;Derives_from=LTnewLM_210021300.1;orthologous_to=LmjF.21.1290_mRNA;ortholog_cluster=OG0002193;product=term%3DSynaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_21 Pfam protein_match 530253 530507 . - . Parent=LTnewLM_210021300.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_21 AUGUSTUS gene 532006 532836 1 - . ID=LTnewLM_210021400 LTnewLM_21 AUGUSTUS mRNA 532006 532836 1 - . ID=LTnewLM_210021400.1;Parent=LTnewLM_210021400 LTnewLM_21 AUGUSTUS CDS 532006 532836 1 - 0 ID=LTnewLM_210021400.1:CDS:1;Parent=LTnewLM_210021400.1 ### LTnewLM_21 . polypeptide 532006 532836 . - . ID=LTnewLM_210021400.1:pep;Derives_from=LTnewLM_210021400.1;orthologous_to=LmjF.21.1295_mRNA;ortholog_cluster=OG0002194;product=term%3DRing finger domain/RING-H2 zinc finger domain/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF12678|Pfam:PF13923|Pfam:PF00097;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_21 Pfam protein_match 532030 532122 . - . Parent=LTnewLM_210021400.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 LTnewLM_21 Pfam protein_match 532030 532128 . - . Parent=LTnewLM_210021400.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_21 Pfam protein_match 532033 532113 . - . Parent=LTnewLM_210021400.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_21 Pfam protein_match 532033 532113 . - . Parent=LTnewLM_210021400.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_21 AUGUSTUS gene 536006 538045 1 - . ID=LTnewLM_210021500 LTnewLM_21 AUGUSTUS mRNA 536006 538045 1 - . ID=LTnewLM_210021500.1;Parent=LTnewLM_210021500 LTnewLM_21 AUGUSTUS CDS 536006 538045 1 - 0 ID=LTnewLM_210021500.1:CDS:1;Parent=LTnewLM_210021500.1 ### LTnewLM_21 . polypeptide 536006 538045 . - . ID=LTnewLM_210021500.1:pep;Derives_from=LTnewLM_210021500.1;orthologous_to=LmjF.21.1300_mRNA;ortholog_cluster=OG0002195;product=term%3DRF-1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00472;Ontology_term=GO:0006415,GO:0003747 LTnewLM_21 Pfam protein_match 536186 536401 . - . Parent=LTnewLM_210021500.1:pep;Name=PF00472;signature_desc=RF-1 domain;Ontology_term=GO:0003747,GO:0006415 ### LTnewLM_21 AUGUSTUS gene 539067 540143 1 - . ID=LTnewLM_210021600 LTnewLM_21 AUGUSTUS mRNA 539067 540143 1 - . ID=LTnewLM_210021600.1;Parent=LTnewLM_210021600 LTnewLM_21 AUGUSTUS CDS 539067 540143 1 - 0 ID=LTnewLM_210021600.1:CDS:1;Parent=LTnewLM_210021600.1 ### LTnewLM_21 . polypeptide 539067 540143 . - . ID=LTnewLM_210021600.1:pep;Derives_from=LTnewLM_210021600.1;orthologous_to=LmjF.21.1310_mRNA;ortholog_cluster=OG0002196;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 540753 541238 1 - . ID=LTnewLM_210021700 LTnewLM_21 AUGUSTUS mRNA 540753 541238 1 - . ID=LTnewLM_210021700.1;Parent=LTnewLM_210021700 LTnewLM_21 AUGUSTUS CDS 540753 541238 1 - 0 ID=LTnewLM_210021700.1:CDS:1;Parent=LTnewLM_210021700.1 ### LTnewLM_21 . polypeptide 540753 541238 . - . ID=LTnewLM_210021700.1:pep;Derives_from=LTnewLM_210021700.1;orthologous_to=LmjF.21.1320_mRNA;ortholog_cluster=OG0002197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 542754 547541 1 - . ID=LTnewLM_210021800 LTnewLM_21 AUGUSTUS mRNA 542754 547541 1 - . ID=LTnewLM_210021800.1;Parent=LTnewLM_210021800 LTnewLM_21 AUGUSTUS CDS 542754 547541 1 - 0 ID=LTnewLM_210021800.1:CDS:1;Parent=LTnewLM_210021800.1 ### LTnewLM_21 . polypeptide 542754 547541 . - . ID=LTnewLM_210021800.1:pep;Derives_from=LTnewLM_210021800.1;orthologous_to=LmjF.21.1330_mRNA;ortholog_cluster=OG0002198;product=term%3DRecF/RecN/SMC N terminal domain/SMC proteins Flexible Hinge Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02463|Pfam:PF06470;Ontology_term=GO:0051276,GO:0005515,GO:0005694,GO:0005524 LTnewLM_21 Pfam protein_match 543141 547016 . - . Parent=LTnewLM_210021800.1:pep;Name=PF02463;signature_desc=RecF/RecN/SMC N terminal domain LTnewLM_21 Pfam protein_match 545100 545450 . - . Parent=LTnewLM_210021800.1:pep;Name=PF06470;signature_desc=SMC proteins Flexible Hinge Domain;Ontology_term=GO:0005515,GO:0005524,GO:0051276,GO:0005694 ### LTnewLM_21 AUGUSTUS gene 550738 552189 1 - . ID=LTnewLM_210021900 LTnewLM_21 AUGUSTUS mRNA 550738 552189 1 - . ID=LTnewLM_210021900.1;Parent=LTnewLM_210021900 LTnewLM_21 AUGUSTUS CDS 550738 552189 1 - 0 ID=LTnewLM_210021900.1:CDS:1;Parent=LTnewLM_210021900.1 ### LTnewLM_21 . polypeptide 550738 552189 . - . ID=LTnewLM_210021900.1:pep;Derives_from=LTnewLM_210021900.1;orthologous_to=LmjF.21.1340_mRNA;ortholog_cluster=OG0002199;product=term%3DV-ATPase subunit H%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03224|Pfam:PF11698;Ontology_term=GO:0046961,GO:0016820,GO:0015991,GO:0000221 LTnewLM_21 Pfam protein_match 550762 551115 . - . Parent=LTnewLM_210021900.1:pep;Name=PF11698;signature_desc=V-ATPase subunit H;Ontology_term=GO:0016820,GO:0015991,GO:0000221 LTnewLM_21 Pfam protein_match 551137 552141 . - . Parent=LTnewLM_210021900.1:pep;Name=PF03224;signature_desc=V-ATPase subunit H;Ontology_term=GO:0046961,GO:0015991,GO:0000221 ### LTnewLM_21 AUGUSTUS gene 553774 558522 1 - . ID=LTnewLM_210022000 LTnewLM_21 AUGUSTUS mRNA 553774 558522 1 - . ID=LTnewLM_210022000.1;Parent=LTnewLM_210022000 LTnewLM_21 AUGUSTUS CDS 553774 558522 1 - 0 ID=LTnewLM_210022000.1:CDS:1;Parent=LTnewLM_210022000.1 ### LTnewLM_21 . polypeptide 553774 558522 . - . ID=LTnewLM_210022000.1:pep;Derives_from=LTnewLM_210022000.1;orthologous_to=LmjF.21.1350_mRNA;ortholog_cluster=OG0002200;product=term%3DPB1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00564;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 555199 555468 . - . Parent=LTnewLM_210022000.1:pep;Name=PF00564;signature_desc=PB1 domain;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 559954 561123 1 - . ID=LTnewLM_210022100 LTnewLM_21 AUGUSTUS mRNA 559954 561123 1 - . ID=LTnewLM_210022100.1;Parent=LTnewLM_210022100 LTnewLM_21 AUGUSTUS CDS 559954 561123 1 - 0 ID=LTnewLM_210022100.1:CDS:1;Parent=LTnewLM_210022100.1 ### LTnewLM_21 . polypeptide 559954 561123 . - . ID=LTnewLM_210022100.1:pep;Derives_from=LTnewLM_210022100.1;orthologous_to=LmjF.21.1360_mRNA;ortholog_cluster=OG0002201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 562001 562240 1 - . ID=LTnewLM_210022200 LTnewLM_21 AUGUSTUS mRNA 562001 562240 1 - . ID=LTnewLM_210022200.1;Parent=LTnewLM_210022200 LTnewLM_21 AUGUSTUS CDS 562001 562240 1 - 0 ID=LTnewLM_210022200.1:CDS:1;Parent=LTnewLM_210022200.1 ### LTnewLM_21 . polypeptide 562001 562240 . - . ID=LTnewLM_210022200.1:pep;Derives_from=LTnewLM_210022200.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 562878 566027 1 - . ID=LTnewLM_210022300 LTnewLM_21 AUGUSTUS mRNA 562878 566027 1 - . ID=LTnewLM_210022300.1;Parent=LTnewLM_210022300 LTnewLM_21 AUGUSTUS CDS 562878 566027 1 - 0 ID=LTnewLM_210022300.1:CDS:1;Parent=LTnewLM_210022300.1 ### LTnewLM_21 . polypeptide 562878 566027 . - . ID=LTnewLM_210022300.1:pep;Derives_from=LTnewLM_210022300.1;orthologous_to=LmjF.21.1370_mRNA;ortholog_cluster=OG0002202;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 568972 570075 1 - . ID=LTnewLM_210022400 LTnewLM_21 AUGUSTUS mRNA 568972 570075 1 - . ID=LTnewLM_210022400.1;Parent=LTnewLM_210022400 LTnewLM_21 AUGUSTUS CDS 568972 570075 1 - 0 ID=LTnewLM_210022400.1:CDS:1;Parent=LTnewLM_210022400.1 ### LTnewLM_21 . polypeptide 568972 570075 . - . ID=LTnewLM_210022400.1:pep;Derives_from=LTnewLM_210022400.1;orthologous_to=LmjF.21.1380_mRNA;ortholog_cluster=OG0002203;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 571904 573694 1 - . ID=LTnewLM_210022500 LTnewLM_21 AUGUSTUS mRNA 571904 573694 1 - . ID=LTnewLM_210022500.1;Parent=LTnewLM_210022500 LTnewLM_21 AUGUSTUS CDS 571904 573694 1 - 0 ID=LTnewLM_210022500.1:CDS:1;Parent=LTnewLM_210022500.1 ### LTnewLM_21 . polypeptide 571904 573694 . - . ID=LTnewLM_210022500.1:pep;Derives_from=LTnewLM_210022500.1;orthologous_to=LmjF.21.1390_mRNA,LmjF.21.1400_mRNA;ortholog_cluster=OG0000379;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_21 Pfam protein_match 572273 572728 . - . Parent=LTnewLM_210022500.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_21 Liftoff gene 574921 576030 . - . ID=LTnewLM_210022600;coverage=0.997;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1410_0 LTnewLM_21 Liftoff mRNA 574921 576030 . - . ID=LTnewLM_210022600.1;Parent=LTnewLM_210022600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 574921 576030 . - 0 ID=LTnewLM_210022600.1:CDS:1;Parent=LTnewLM_210022600.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 574921 576030 . - . ID=LTnewLM_210022600.1:pep;Derives_from=LTnewLM_210022600.1;orthologous_to=LmjF.21.1410_mRNA;ortholog_cluster=OG0002204;product=term%3DGamma-butyrobetaine hydroxylase-like%2C N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06155 LTnewLM_21 Pfam protein_match 575080 575256 . - . Parent=LTnewLM_210022600.1:pep;Name=PF06155;signature_desc=Gamma-butyrobetaine hydroxylase-like%2C N-terminal ### LTnewLM_21 AUGUSTUS gene 576757 577563 1 - . ID=LTnewLM_210022700 LTnewLM_21 AUGUSTUS mRNA 576757 577563 1 - . ID=LTnewLM_210022700.1;Parent=LTnewLM_210022700 LTnewLM_21 AUGUSTUS CDS 576757 577563 1 - 0 ID=LTnewLM_210022700.1:CDS:1;Parent=LTnewLM_210022700.1 ### LTnewLM_21 . polypeptide 576757 577563 . - . ID=LTnewLM_210022700.1:pep;Derives_from=LTnewLM_210022700.1;orthologous_to=LmjF.21.1420_mRNA;ortholog_cluster=OG0002205;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 579226 580665 1 - . ID=LTnewLM_210022800 LTnewLM_21 AUGUSTUS mRNA 579226 580665 1 - . ID=LTnewLM_210022800.1;Parent=LTnewLM_210022800 LTnewLM_21 AUGUSTUS CDS 579226 580665 1 - 0 ID=LTnewLM_210022800.1:CDS:1;Parent=LTnewLM_210022800.1 ### LTnewLM_21 . polypeptide 579226 580665 . - . ID=LTnewLM_210022800.1:pep;Derives_from=LTnewLM_210022800.1;orthologous_to=LmjF.21.1430_mRNA;ortholog_cluster=OG0002206;product=term%3DDehydrogenase E1 component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00676;Ontology_term=GO:0016624,GO:0008152 LTnewLM_21 Pfam protein_match 579367 580290 . - . Parent=LTnewLM_210022800.1:pep;Name=PF00676;signature_desc=Dehydrogenase E1 component;Ontology_term=GO:0016624,GO:0008152 ### LTnewLM_21 AUGUSTUS gene 582930 583595 1 - . ID=LTnewLM_210022900 LTnewLM_21 AUGUSTUS mRNA 582930 583595 1 - . ID=LTnewLM_210022900.1;Parent=LTnewLM_210022900 LTnewLM_21 AUGUSTUS CDS 582930 583595 1 - 0 ID=LTnewLM_210022900.1:CDS:1;Parent=LTnewLM_210022900.1 ### LTnewLM_21 . polypeptide 582930 583595 . - . ID=LTnewLM_210022900.1:pep;Derives_from=LTnewLM_210022900.1;orthologous_to=LmjF.21.1440_mRNA;ortholog_cluster=OG0002207;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 585518 588766 1 - . ID=LTnewLM_210023000 LTnewLM_21 AUGUSTUS mRNA 585518 588766 1 - . ID=LTnewLM_210023000.1;Parent=LTnewLM_210023000 LTnewLM_21 AUGUSTUS CDS 585518 588766 1 - 0 ID=LTnewLM_210023000.1:CDS:1;Parent=LTnewLM_210023000.1 ### LTnewLM_21 . polypeptide 585518 588766 . - . ID=LTnewLM_210023000.1:pep;Derives_from=LTnewLM_210023000.1;orthologous_to=LmjF.21.1450_mRNA;ortholog_cluster=OG0002208;product=term%3DPRMT5 arginine-N-methyltransferase/PRMT5 oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05185|Pfam:PF17286;Ontology_term=GO:0006479,GO:0008168 LTnewLM_21 Pfam protein_match 585617 586213 . - . Parent=LTnewLM_210023000.1:pep;Name=PF17286;signature_desc=PRMT5 oligomerisation domain LTnewLM_21 Pfam protein_match 586277 586879 . - . Parent=LTnewLM_210023000.1:pep;Name=PF05185;signature_desc=PRMT5 arginine-N-methyltransferase;Ontology_term=GO:0008168,GO:0006479 ### LTnewLM_21 AUGUSTUS gene 589340 591454 1.43 - . ID=LTnewLM_210023100 LTnewLM_21 AUGUSTUS mRNA 589340 591454 1 - . ID=LTnewLM_210023100.1;Parent=LTnewLM_210023100 LTnewLM_21 AUGUSTUS CDS 589340 591454 1 - 0 ID=LTnewLM_210023100.1:CDS:1;Parent=LTnewLM_210023100.1 LTnewLM_21 AUGUSTUS mRNA 589939 591454 0.43 - . ID=LTnewLM_210023100.2;Parent=LTnewLM_210023100 LTnewLM_21 AUGUSTUS CDS 589939 590049 0.55 - 0 ID=LTnewLM_210023100.2:CDS:1;Parent=LTnewLM_210023100.2 LTnewLM_21 AUGUSTUS CDS 590117 591454 0.48 - 0 ID=LTnewLM_210023100.2:CDS:2;Parent=LTnewLM_210023100.2 ### LTnewLM_21 . polypeptide 589340 591454 . - . ID=LTnewLM_210023100.1:pep;Derives_from=LTnewLM_210023100.1;orthologous_to=LTnewLM_210023100.2,LmjF.21.1460_mRNA;ortholog_cluster=OG0000380;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 589939 591454 . - . ID=LTnewLM_210023100.2:pep;Derives_from=LTnewLM_210023100.2;orthologous_to=LTnewLM_210023100.1,LmjF.21.1460_mRNA;ortholog_cluster=OG0000380;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 592756 593811 1 - . ID=LTnewLM_210023200 LTnewLM_21 AUGUSTUS mRNA 592756 593811 1 - . ID=LTnewLM_210023200.1;Parent=LTnewLM_210023200 LTnewLM_21 AUGUSTUS CDS 592756 593811 1 - 0 ID=LTnewLM_210023200.1:CDS:1;Parent=LTnewLM_210023200.1 ### LTnewLM_21 . polypeptide 592756 593811 . - . ID=LTnewLM_210023200.1:pep;Derives_from=LTnewLM_210023200.1;orthologous_to=LmjF.21.1470_mRNA;ortholog_cluster=OG0002209;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 594940 597594 1 - . ID=LTnewLM_210023300 LTnewLM_21 AUGUSTUS mRNA 594940 597594 1 - . ID=LTnewLM_210023300.1;Parent=LTnewLM_210023300 LTnewLM_21 AUGUSTUS CDS 594940 597594 1 - 0 ID=LTnewLM_210023300.1:CDS:1;Parent=LTnewLM_210023300.1 ### LTnewLM_21 . polypeptide 594940 597594 . - . ID=LTnewLM_210023300.1:pep;Derives_from=LTnewLM_210023300.1;orthologous_to=LmjF.21.1480_mRNA;ortholog_cluster=OG0002210;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 601066 603075 1 - . ID=LTnewLM_210023400 LTnewLM_21 AUGUSTUS mRNA 601066 603075 1 - . ID=LTnewLM_210023400.1;Parent=LTnewLM_210023400 LTnewLM_21 AUGUSTUS CDS 601066 603075 1 - 0 ID=LTnewLM_210023400.1:CDS:1;Parent=LTnewLM_210023400.1 ### LTnewLM_21 . polypeptide 601066 603075 . - . ID=LTnewLM_210023400.1:pep;Derives_from=LTnewLM_210023400.1;orthologous_to=LmjF.21.1490_mRNA;ortholog_cluster=OG0002211;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 603764 605398 1 - . ID=LTnewLM_210023500 LTnewLM_21 AUGUSTUS mRNA 603764 605398 1 - . ID=LTnewLM_210023500.1;Parent=LTnewLM_210023500 LTnewLM_21 AUGUSTUS CDS 603764 605398 1 - 0 ID=LTnewLM_210023500.1:CDS:1;Parent=LTnewLM_210023500.1 ### LTnewLM_21 . polypeptide 603764 605398 . - . ID=LTnewLM_210023500.1:pep;Derives_from=LTnewLM_210023500.1;orthologous_to=LmjF.21.1500_mRNA;ortholog_cluster=OG0002212;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 606119 610516 1 - . ID=LTnewLM_210023600 LTnewLM_21 AUGUSTUS mRNA 606119 610516 1 - . ID=LTnewLM_210023600.1;Parent=LTnewLM_210023600 LTnewLM_21 AUGUSTUS CDS 606119 610516 1 - 0 ID=LTnewLM_210023600.1:CDS:1;Parent=LTnewLM_210023600.1 ### LTnewLM_21 . polypeptide 606119 610516 . - . ID=LTnewLM_210023600.1:pep;Derives_from=LTnewLM_210023600.1;orthologous_to=LmjF.21.1510_mRNA;ortholog_cluster=OG0002213;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 613871 614857 1.61e+03 - . ID=LTnewLM_210023700:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.21.1520:mRNA 2 331;original_prot_length=331 LTnewLM_21 . pseudogenic_transcript 613871 614857 . - . ID=LTnewLM_210023700.1;Parent=LTnewLM_210023700:pseudogene LTnewLM_21 . pseudogenic_exon 613871 614857 . - . ID=LTnewLM_210023700.1:pseudogenic_exon:1;Parent=LTnewLM_210023700.1 ### LTnewLM_21 . polypeptide 613871 614857 . - . ID=LTnewLM_210023700.1:pep;Derives_from=LTnewLM_210023700.1;orthologous_to=LmjF.21.1520_mRNA;ortholog_cluster=OG0007503;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 615491 617518 1 - . ID=LTnewLM_210023800 LTnewLM_21 AUGUSTUS mRNA 615491 617518 1 - . ID=LTnewLM_210023800.1;Parent=LTnewLM_210023800 LTnewLM_21 AUGUSTUS CDS 615491 617518 1 - 0 ID=LTnewLM_210023800.1:CDS:1;Parent=LTnewLM_210023800.1 ### LTnewLM_21 . polypeptide 615491 617518 . - . ID=LTnewLM_210023800.1:pep;Derives_from=LTnewLM_210023800.1;orthologous_to=LmjF.21.1530_mRNA;ortholog_cluster=OG0002214;product=term%3DVitamin B6 photo-protection and homoeostasis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04884 LTnewLM_21 Pfam protein_match 616628 617344 . - . Parent=LTnewLM_210023800.1:pep;Name=PF04884;signature_desc=Vitamin B6 photo-protection and homoeostasis ### LTnewLM_21 AUGUSTUS gene 621095 626926 1 - . ID=LTnewLM_210023900 LTnewLM_21 AUGUSTUS mRNA 621095 626926 1 - . ID=LTnewLM_210023900.1;Parent=LTnewLM_210023900 LTnewLM_21 AUGUSTUS CDS 621095 626926 1 - 0 ID=LTnewLM_210023900.1:CDS:1;Parent=LTnewLM_210023900.1 ### LTnewLM_21 . polypeptide 621095 626926 . - . ID=LTnewLM_210023900.1:pep;Derives_from=LTnewLM_210023900.1;orthologous_to=LmjF.21.1540_mRNA;ortholog_cluster=OG0002215;product=term%3DSec8 exocyst complex component specific domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04048;Ontology_term=GO:0015031,GO:0006904,GO:0000145 LTnewLM_21 Pfam protein_match 625817 626089 . - . Parent=LTnewLM_210023900.1:pep;Name=PF04048;signature_desc=Sec8 exocyst complex component specific domain;Ontology_term=GO:0006904,GO:0015031,GO:0000145 ### LTnewLM_21 AUGUSTUS gene 628359 628880 1 - . ID=LTnewLM_210024000 LTnewLM_21 AUGUSTUS mRNA 628359 628880 1 - . ID=LTnewLM_210024000.1;Parent=LTnewLM_210024000 LTnewLM_21 AUGUSTUS CDS 628359 628880 1 - 0 ID=LTnewLM_210024000.1:CDS:1;Parent=LTnewLM_210024000.1 ### LTnewLM_21 . polypeptide 628359 628880 . - . ID=LTnewLM_210024000.1:pep;Derives_from=LTnewLM_210024000.1;orthologous_to=LTnewLM_200021600.1,LmjF.20.1650_mRNA,LmjF.21.1550_mRNA;ortholog_cluster=OG0000149;product=term%3DRibosomal_S17 N-terminal/Ribosomal protein S17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16205|Pfam:PF00366;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 628416 628619 . - . Parent=LTnewLM_210024000.1:pep;Name=PF00366;signature_desc=Ribosomal protein S17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_21 Pfam protein_match 628626 628829 . - . Parent=LTnewLM_210024000.1:pep;Name=PF16205;signature_desc=Ribosomal_S17 N-terminal ### LTnewLM_21 AUGUSTUS gene 630129 631721 1 - . ID=LTnewLM_210024100 LTnewLM_21 AUGUSTUS mRNA 630129 631721 1 - . ID=LTnewLM_210024100.1;Parent=LTnewLM_210024100 LTnewLM_21 AUGUSTUS CDS 630129 631721 1 - 0 ID=LTnewLM_210024100.1:CDS:1;Parent=LTnewLM_210024100.1 ### LTnewLM_21 . polypeptide 630129 631721 . - . ID=LTnewLM_210024100.1:pep;Derives_from=LTnewLM_210024100.1;orthologous_to=LmjF.21.1560_mRNA;ortholog_cluster=OG0002216;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 635725 637032 1 - . ID=LTnewLM_210024200 LTnewLM_21 AUGUSTUS mRNA 635725 637032 1 - . ID=LTnewLM_210024200.1;Parent=LTnewLM_210024200 LTnewLM_21 AUGUSTUS CDS 635725 637032 1 - 0 ID=LTnewLM_210024200.1:CDS:1;Parent=LTnewLM_210024200.1 ### LTnewLM_21 . polypeptide 635725 637032 . - . ID=LTnewLM_210024200.1:pep;Derives_from=LTnewLM_210024200.1;orthologous_to=LmjF.21.1552_mRNA;ortholog_cluster=OG0002217;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_21 Pfam protein_match 635905 636228 . - . Parent=LTnewLM_210024200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_21 Pfam protein_match 636343 636852 . - . Parent=LTnewLM_210024200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_21 Pfam protein_match 636358 636810 . - . Parent=LTnewLM_210024200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_21 AUGUSTUS gene 638657 639844 1 - . ID=LTnewLM_210024300 LTnewLM_21 AUGUSTUS mRNA 638657 639844 1 - . ID=LTnewLM_210024300.1;Parent=LTnewLM_210024300 LTnewLM_21 AUGUSTUS CDS 638657 639844 1 - 0 ID=LTnewLM_210024300.1:CDS:1;Parent=LTnewLM_210024300.1 ### LTnewLM_21 . polypeptide 638657 639844 . - . ID=LTnewLM_210024300.1:pep;Derives_from=LTnewLM_210024300.1;orthologous_to=LmjF.21.1555_mRNA;ortholog_cluster=OG0002218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 641692 642834 . - . ID=LTnewLM_210024400.1:pep;Derives_from=LTnewLM_210024400.1;orthologous_to=LTnewLM_210024400.2,LmjF.21.1558.1_mRNA,LmjF.21.1558.2_mRNA;ortholog_cluster=OG0000156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . polypeptide 641692 643047 . - . ID=LTnewLM_210024400.2:pep;Derives_from=LTnewLM_210024400.2;orthologous_to=LTnewLM_210024400.1,LmjF.21.1558.1_mRNA,LmjF.21.1558.2_mRNA;ortholog_cluster=OG0000156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 Liftoff gene 641692 650043 . - . ID=LTnewLM_210024400;coverage=0.969;sequence_ID=0.873;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.21.1558_0 LTnewLM_21 Liftoff mRNA 641692 642871 . - . ID=LTnewLM_210024400.1;Parent=LTnewLM_210024400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 641692 642834 . - 0 ID=LTnewLM_210024400.1:CDS:1;Parent=LTnewLM_210024400.1;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 642835 642871 . - . ID=LTnewLM_210024400:five_prime_UTR;Parent=LTnewLM_210024400.1;extra_copy_number=0 LTnewLM_21 Liftoff mRNA 641692 650043 . - . ID=LTnewLM_210024400.2;Parent=LTnewLM_210024400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 641692 643047 . - 0 ID=LTnewLM_210024400.2:CDS:1;Parent=LTnewLM_210024400.2;extra_copy_number=0 LTnewLM_21 Liftoff five_prime_UTR 643048 650043 . - . ID=LTnewLM_210024400:five_prime_UTR.1;Parent=LTnewLM_210024400.2;extra_copy_number=0 ### LTnewLM_21 AUGUSTUS gene 651104 652417 1 - . ID=LTnewLM_210024500 LTnewLM_21 AUGUSTUS mRNA 651104 652417 1 - . ID=LTnewLM_210024500.1;Parent=LTnewLM_210024500 LTnewLM_21 AUGUSTUS CDS 651104 652417 1 - 0 ID=LTnewLM_210024500.1:CDS:1;Parent=LTnewLM_210024500.1 ### LTnewLM_21 . polypeptide 651104 652417 . - . ID=LTnewLM_210024500.1:pep;Derives_from=LTnewLM_210024500.1;orthologous_to=LmjF.21.1561_mRNA;ortholog_cluster=OG0002219;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 655739 657346 1 - . ID=LTnewLM_210024600 LTnewLM_21 AUGUSTUS mRNA 655739 657346 1 - . ID=LTnewLM_210024600.1;Parent=LTnewLM_210024600 LTnewLM_21 AUGUSTUS CDS 655739 657346 1 - 0 ID=LTnewLM_210024600.1:CDS:1;Parent=LTnewLM_210024600.1 ### LTnewLM_21 . polypeptide 655739 657346 . - . ID=LTnewLM_210024600.1:pep;Derives_from=LTnewLM_210024600.1;orthologous_to=LmjF.21.1563_mRNA;ortholog_cluster=OG0002220;product=term%3DGMC oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00732|Pfam:PF05199;Ontology_term=GO:0055114,GO:0050660,GO:0016614 LTnewLM_21 Pfam protein_match 655829 656152 . - . Parent=LTnewLM_210024600.1:pep;Name=PF05199;signature_desc=GMC oxidoreductase;Ontology_term=GO:0016614,GO:0055114 LTnewLM_21 Pfam protein_match 656483 657289 . - . Parent=LTnewLM_210024600.1:pep;Name=PF00732;signature_desc=GMC oxidoreductase;Ontology_term=GO:0016614,GO:0050660,GO:0055114 ### LTnewLM_21 AUGUSTUS gene 659926 662322 1 - . ID=LTnewLM_210024700 LTnewLM_21 AUGUSTUS mRNA 659926 662322 1 - . ID=LTnewLM_210024700.1;Parent=LTnewLM_210024700 LTnewLM_21 AUGUSTUS CDS 659926 662322 1 - 0 ID=LTnewLM_210024700.1:CDS:1;Parent=LTnewLM_210024700.1 ### LTnewLM_21 . polypeptide 659926 662322 . - . ID=LTnewLM_210024700.1:pep;Derives_from=LTnewLM_210024700.1;orthologous_to=LmjF.21.1565_mRNA;ortholog_cluster=OG0002221;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 661555 662313 . - . Parent=LTnewLM_210024700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 661567 662304 . - . Parent=LTnewLM_210024700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_21 AUGUSTUS gene 663989 665443 1 - . ID=LTnewLM_210024800 LTnewLM_21 AUGUSTUS mRNA 663989 665443 1 - . ID=LTnewLM_210024800.1;Parent=LTnewLM_210024800 LTnewLM_21 AUGUSTUS CDS 663989 665443 1 - 0 ID=LTnewLM_210024800.1:CDS:1;Parent=LTnewLM_210024800.1 ### LTnewLM_21 . polypeptide 663989 665443 . - . ID=LTnewLM_210024800.1:pep;Derives_from=LTnewLM_210024800.1;orthologous_to=LmjF.21.1566_mRNA;ortholog_cluster=OG0002222;product=term%3DMicrotubule-binding protein MIP-T3 CH-like domain/Microtubule-binding protein MIP-T3 C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10243|Pfam:PF17749 LTnewLM_21 Pfam protein_match 664019 664522 . - . Parent=LTnewLM_210024800.1:pep;Name=PF17749;signature_desc=Microtubule-binding protein MIP-T3 C-terminal region LTnewLM_21 Pfam protein_match 665102 665431 . - . Parent=LTnewLM_210024800.1:pep;Name=PF10243;signature_desc=Microtubule-binding protein MIP-T3 CH-like domain ### LTnewLM_21 AUGUSTUS gene 666500 666940 1 - . ID=LTnewLM_210024900 LTnewLM_21 AUGUSTUS mRNA 666500 666940 1 - . ID=LTnewLM_210024900.1;Parent=LTnewLM_210024900 LTnewLM_21 AUGUSTUS CDS 666500 666940 1 - 0 ID=LTnewLM_210024900.1:CDS:1;Parent=LTnewLM_210024900.1 ### LTnewLM_21 . polypeptide 666500 666940 . - . ID=LTnewLM_210024900.1:pep;Derives_from=LTnewLM_210024900.1;orthologous_to=LmjF.21.1568_mRNA;ortholog_cluster=OG0002223;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 667586 668814 . - . ID=LTnewLM_210025000:pseudogene;coverage=1.0;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1567_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 667586 668814 . - . ID=LTnewLM_210025000.1;Parent=LTnewLM_210025000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 667586 668814 . - . ID=LTnewLM_210025000.1:pseudogenic_exon:1;Parent=LTnewLM_210025000.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 667586 668814 . - . ID=LTnewLM_210025000.1:pep;Derives_from=LTnewLM_210025000.1;orthologous_to=LmjF.21.1567_mRNA;ortholog_cluster=OG0007504;product=term%3DPeroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00141;Ontology_term=GO:0006979,GO:0004601,GO:0055114,GO:0020037 LTnewLM_21 Pfam protein_match 667972 668259 . - . Parent=LTnewLM_210025000.1:pep;Name=PF00141;signature_desc=Peroxidase;Ontology_term=GO:0004601,GO:0020037,GO:0006979,GO:0055114 ### LTnewLM_21 AUGUSTUS gene 669589 672384 1 - . ID=LTnewLM_210025100 LTnewLM_21 AUGUSTUS mRNA 669589 672384 1 - . ID=LTnewLM_210025100.1;Parent=LTnewLM_210025100 LTnewLM_21 AUGUSTUS CDS 669589 672384 1 - 0 ID=LTnewLM_210025100.1:CDS:1;Parent=LTnewLM_210025100.1 ### LTnewLM_21 . polypeptide 669589 672384 . - . ID=LTnewLM_210025100.1:pep;Derives_from=LTnewLM_210025100.1;orthologous_to=LmjF.21.1569_mRNA;ortholog_cluster=OG0002224;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 675362 677257 1 - . ID=LTnewLM_210025200 LTnewLM_21 AUGUSTUS mRNA 675362 677257 1 - . ID=LTnewLM_210025200.1;Parent=LTnewLM_210025200 LTnewLM_21 AUGUSTUS CDS 675362 677257 1 - 0 ID=LTnewLM_210025200.1:CDS:1;Parent=LTnewLM_210025200.1 ### LTnewLM_21 . polypeptide 675362 677257 . - . ID=LTnewLM_210025200.1:pep;Derives_from=LTnewLM_210025200.1;orthologous_to=LmjF.21.1570_mRNA;ortholog_cluster=OG0002225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 683883 685877 1 - . ID=LTnewLM_210025300 LTnewLM_21 AUGUSTUS mRNA 683883 685877 1 - . ID=LTnewLM_210025300.1;Parent=LTnewLM_210025300 LTnewLM_21 AUGUSTUS CDS 683883 685877 1 - 0 ID=LTnewLM_210025300.1:CDS:1;Parent=LTnewLM_210025300.1 ### LTnewLM_21 . polypeptide 683883 685877 . - . ID=LTnewLM_210025300.1:pep;Derives_from=LTnewLM_210025300.1;orthologous_to=LmjF.21.1580_mRNA;ortholog_cluster=OG0002226;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 687270 688682 1 - . ID=LTnewLM_210025400 LTnewLM_21 AUGUSTUS mRNA 687270 688682 1 - . ID=LTnewLM_210025400.1;Parent=LTnewLM_210025400 LTnewLM_21 AUGUSTUS CDS 687270 688682 1 - 0 ID=LTnewLM_210025400.1:CDS:1;Parent=LTnewLM_210025400.1 ### LTnewLM_21 . polypeptide 687270 688682 . - . ID=LTnewLM_210025400.1:pep;Derives_from=LTnewLM_210025400.1;orthologous_to=LmjF.21.1590_mRNA;ortholog_cluster=OG0002227;product=term%3DF-box-like/F-box domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12937|Pfam:PF00646;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 688410 688553 . - . Parent=LTnewLM_210025400.1:pep;Name=PF12937;signature_desc=F-box-like;Ontology_term=GO:0005515 LTnewLM_21 Pfam protein_match 688416 688550 . - . Parent=LTnewLM_210025400.1:pep;Name=PF00646;signature_desc=F-box domain;Ontology_term=GO:0005515 ### LTnewLM_21 AUGUSTUS gene 691013 691738 1 - . ID=LTnewLM_210025500 LTnewLM_21 AUGUSTUS mRNA 691013 691738 1 - . ID=LTnewLM_210025500.1;Parent=LTnewLM_210025500 LTnewLM_21 AUGUSTUS CDS 691013 691738 1 - 0 ID=LTnewLM_210025500.1:CDS:1;Parent=LTnewLM_210025500.1 ### LTnewLM_21 . polypeptide 691013 691738 . - . ID=LTnewLM_210025500.1:pep;Derives_from=LTnewLM_210025500.1;orthologous_to=LmjF.21.1600_mRNA;ortholog_cluster=OG0002228;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 692467 692938 . - . ID=LTnewLM_210025600:pseudogene;coverage=0.995;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1605_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 692467 692938 . - . ID=LTnewLM_210025600.1;Parent=LTnewLM_210025600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 692467 692938 . - . ID=LTnewLM_210025600.1:pseudogenic_exon:1;Parent=LTnewLM_210025600.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 692467 692938 . - . ID=LTnewLM_210025600.1:pep;Derives_from=LTnewLM_210025600.1;product=term%3Dhypothetical protein ### LTnewLM_21 AUGUSTUS gene 695297 695782 1 - . ID=LTnewLM_210025700 LTnewLM_21 AUGUSTUS mRNA 695297 695782 1 - . ID=LTnewLM_210025700.1;Parent=LTnewLM_210025700 LTnewLM_21 AUGUSTUS CDS 695297 695782 1 - 0 ID=LTnewLM_210025700.1:CDS:1;Parent=LTnewLM_210025700.1 ### LTnewLM_21 . polypeptide 695297 695782 . - . ID=LTnewLM_210025700.1:pep;Derives_from=LTnewLM_210025700.1;orthologous_to=LmjF.21.1610_mRNA;ortholog_cluster=OG0002229;product=term%3DUbiquitin-2 like Rad60 SUMO-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13881 LTnewLM_21 Pfam protein_match 695378 695677 . - . Parent=LTnewLM_210025700.1:pep;Name=PF13881;signature_desc=Ubiquitin-2 like Rad60 SUMO-like ### LTnewLM_21 AUGUSTUS gene 697552 698574 1 - . ID=LTnewLM_210025800 LTnewLM_21 AUGUSTUS mRNA 697552 698574 1 - . ID=LTnewLM_210025800.1;Parent=LTnewLM_210025800 LTnewLM_21 AUGUSTUS CDS 697552 698574 1 - 0 ID=LTnewLM_210025800.1:CDS:1;Parent=LTnewLM_210025800.1 ### LTnewLM_21 . polypeptide 697552 698574 . - . ID=LTnewLM_210025800.1:pep;Derives_from=LTnewLM_210025800.1;orthologous_to=LmjF.21.1620_mRNA;ortholog_cluster=OG0002230;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 699410 699937 1 - . ID=LTnewLM_210025900 LTnewLM_21 AUGUSTUS mRNA 699410 699937 1 - . ID=LTnewLM_210025900.1;Parent=LTnewLM_210025900 LTnewLM_21 AUGUSTUS CDS 699410 699937 1 - 0 ID=LTnewLM_210025900.1:CDS:1;Parent=LTnewLM_210025900.1 ### LTnewLM_21 . polypeptide 699410 699937 . - . ID=LTnewLM_210025900.1:pep;Derives_from=LTnewLM_210025900.1;orthologous_to=LmjF.21.1630_mRNA;ortholog_cluster=OG0002231;product=term%3DEF-hand domain pair/EF-hand domain/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13499|Pfam:PF13405|Pfam:PF13202|Pfam:PF00036;Ontology_term=GO:0005509 LTnewLM_21 Pfam protein_match 699458 699526 . - . Parent=LTnewLM_210025900.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_21 Pfam protein_match 699458 699526 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_21 Pfam protein_match 699458 699658 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_21 Pfam protein_match 699464 699514 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_21 Pfam protein_match 699575 699652 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_21 Pfam protein_match 699578 699718 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_21 Pfam protein_match 699593 699640 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_21 Pfam protein_match 699695 699820 . - . Parent=LTnewLM_210025900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_21 AUGUSTUS gene 700659 701654 1 - . ID=LTnewLM_210026000 LTnewLM_21 AUGUSTUS mRNA 700659 701654 1 - . ID=LTnewLM_210026000.1;Parent=LTnewLM_210026000 LTnewLM_21 AUGUSTUS CDS 700659 701654 1 - 0 ID=LTnewLM_210026000.1:CDS:1;Parent=LTnewLM_210026000.1 ### LTnewLM_21 . polypeptide 700659 701654 . - . ID=LTnewLM_210026000.1:pep;Derives_from=LTnewLM_210026000.1;orthologous_to=LmjF.21.1640_mRNA;ortholog_cluster=OG0002232;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 703276 704775 1 - . ID=LTnewLM_210026100 LTnewLM_21 AUGUSTUS mRNA 703276 704775 1 - . ID=LTnewLM_210026100.1;Parent=LTnewLM_210026100 LTnewLM_21 AUGUSTUS CDS 703276 704775 1 - 0 ID=LTnewLM_210026100.1:CDS:1;Parent=LTnewLM_210026100.1 ### LTnewLM_21 . polypeptide 703276 704775 . - . ID=LTnewLM_210026100.1:pep;Derives_from=LTnewLM_210026100.1;orthologous_to=LmjF.21.1650_mRNA;ortholog_cluster=OG0002233;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_21 Pfam protein_match 703300 704172 . - . Parent=LTnewLM_210026100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_21 Pfam protein_match 703603 704145 . - . Parent=LTnewLM_210026100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_21 AUGUSTUS gene 706153 707046 1 - . ID=LTnewLM_210026200 LTnewLM_21 AUGUSTUS mRNA 706153 707046 1 - . ID=LTnewLM_210026200.1;Parent=LTnewLM_210026200 LTnewLM_21 AUGUSTUS CDS 706153 707046 1 - 0 ID=LTnewLM_210026200.1:CDS:1;Parent=LTnewLM_210026200.1 ### LTnewLM_21 . polypeptide 706153 707046 . - . ID=LTnewLM_210026200.1:pep;Derives_from=LTnewLM_210026200.1;orthologous_to=LmjF.21.1660_mRNA;ortholog_cluster=OG0002234;product=term%3D5'-3' exonuclease%2C N-terminal resolvase-like domain/5'-3' exonuclease%2C C-terminal SAM fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02739|Pfam:PF01367;Ontology_term=GO:0003824,GO:0003677 LTnewLM_21 Pfam protein_match 706204 706431 . - . Parent=LTnewLM_210026200.1:pep;Name=PF01367;signature_desc=5'-3' exonuclease%2C C-terminal SAM fold;Ontology_term=GO:0003677,GO:0003824 LTnewLM_21 Pfam protein_match 706435 707025 . - . Parent=LTnewLM_210026200.1:pep;Name=PF02739;signature_desc=5'-3' exonuclease%2C N-terminal resolvase-like domain;Ontology_term=GO:0003677 ### LTnewLM_21 AUGUSTUS gene 708108 709439 1 - . ID=LTnewLM_210026300 LTnewLM_21 AUGUSTUS mRNA 708108 709439 1 - . ID=LTnewLM_210026300.1;Parent=LTnewLM_210026300 LTnewLM_21 AUGUSTUS CDS 708108 709439 1 - 0 ID=LTnewLM_210026300.1:CDS:1;Parent=LTnewLM_210026300.1 ### LTnewLM_21 . polypeptide 708108 709439 . - . ID=LTnewLM_210026300.1:pep;Derives_from=LTnewLM_210026300.1;orthologous_to=LmjF.21.1670_mRNA;ortholog_cluster=OG0002235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 710211 710663 1 - . ID=LTnewLM_210026400 LTnewLM_21 AUGUSTUS mRNA 710211 710663 1 - . ID=LTnewLM_210026400.1;Parent=LTnewLM_210026400 LTnewLM_21 AUGUSTUS CDS 710211 710663 1 - 0 ID=LTnewLM_210026400.1:CDS:1;Parent=LTnewLM_210026400.1 ### LTnewLM_21 . polypeptide 710211 710663 . - . ID=LTnewLM_210026400.1:pep;Derives_from=LTnewLM_210026400.1;orthologous_to=LmjF.21.1675_mRNA;ortholog_cluster=OG0002236;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 . pseudogene 715137 716846 . - . ID=LTnewLM_210026500:pseudogene;coverage=1.0;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1680_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 715137 716846 . - . ID=LTnewLM_210026500.1;Parent=LTnewLM_210026500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 715137 716846 . - . ID=LTnewLM_210026500.1:pseudogenic_exon:1;Parent=LTnewLM_210026500.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 715137 716846 . - . ID=LTnewLM_210026500.1:pep;Derives_from=LTnewLM_210026500.1;orthologous_to=LmjF.21.1680_mRNA;ortholog_cluster=OG0007505;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715380 715469 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715497 715592 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715644 715697 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715707 715805 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715824 715913 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 715929 716027 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 716058 716135 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_21 Pfam protein_match 716142 716246 . - . Parent=LTnewLM_210026500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_21 AUGUSTUS gene 717405 718160 1 - . ID=LTnewLM_210026600 LTnewLM_21 AUGUSTUS mRNA 717405 718160 1 - . ID=LTnewLM_210026600.1;Parent=LTnewLM_210026600 LTnewLM_21 AUGUSTUS CDS 717405 718160 1 - 0 ID=LTnewLM_210026600.1:CDS:1;Parent=LTnewLM_210026600.1 ### LTnewLM_21 . polypeptide 717405 718160 . - . ID=LTnewLM_210026600.1:pep;Derives_from=LTnewLM_210026600.1;orthologous_to=LmjF.21.1690_mRNA;ortholog_cluster=OG0002237;product=term%3DMitochondrial calcium uniporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04678 LTnewLM_21 Pfam protein_match 717534 718013 . - . Parent=LTnewLM_210026600.1:pep;Name=PF04678;signature_desc=Mitochondrial calcium uniporter ### LTnewLM_21 AUGUSTUS gene 718610 719305 1 - . ID=LTnewLM_210026700 LTnewLM_21 AUGUSTUS mRNA 718610 719305 1 - . ID=LTnewLM_210026700.1;Parent=LTnewLM_210026700 LTnewLM_21 AUGUSTUS CDS 718610 719305 1 - 0 ID=LTnewLM_210026700.1:CDS:1;Parent=LTnewLM_210026700.1 ### LTnewLM_21 . polypeptide 718610 719305 . - . ID=LTnewLM_210026700.1:pep;Derives_from=LTnewLM_210026700.1;orthologous_to=LmjF.21.1700_mRNA;ortholog_cluster=OG0002238;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_21 Pfam protein_match 718682 719221 . - . Parent=LTnewLM_210026700.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 LTnewLM_21 Pfam protein_match 719231 719284 . - . Parent=LTnewLM_210026700.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 ### LTnewLM_21 AUGUSTUS gene 720062 720535 1 - . ID=LTnewLM_210026800 LTnewLM_21 AUGUSTUS mRNA 720062 720535 1 - . ID=LTnewLM_210026800.1;Parent=LTnewLM_210026800 LTnewLM_21 AUGUSTUS CDS 720062 720535 1 - 0 ID=LTnewLM_210026800.1:CDS:1;Parent=LTnewLM_210026800.1 ### LTnewLM_21 . polypeptide 720062 720535 . - . ID=LTnewLM_210026800.1:pep;Derives_from=LTnewLM_210026800.1;orthologous_to=LmjF.21.1710_mRNA;ortholog_cluster=OG0002239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 720951 721352 1 - . ID=LTnewLM_210026900 LTnewLM_21 AUGUSTUS mRNA 720951 721352 1 - . ID=LTnewLM_210026900.1;Parent=LTnewLM_210026900 LTnewLM_21 AUGUSTUS CDS 720951 721352 1 - 0 ID=LTnewLM_210026900.1:CDS:1;Parent=LTnewLM_210026900.1 ### LTnewLM_21 . polypeptide 720951 721352 . - . ID=LTnewLM_210026900.1:pep;Derives_from=LTnewLM_210026900.1;orthologous_to=LmjF.21.1720_mRNA;ortholog_cluster=OG0002240;product=term%3DRibosomal protein L32%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01655;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 720990 721310 . - . Parent=LTnewLM_210026900.1:pep;Name=PF01655;signature_desc=Ribosomal protein L32;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 AUGUSTUS gene 722958 723473 1 + . ID=LTnewLM_210027000 LTnewLM_21 AUGUSTUS mRNA 722958 723473 1 + . ID=LTnewLM_210027000.1;Parent=LTnewLM_210027000 LTnewLM_21 AUGUSTUS CDS 722958 723473 1 + 0 ID=LTnewLM_210027000.1:CDS:1;Parent=LTnewLM_210027000.1 ### LTnewLM_21 . polypeptide 722958 723473 . + . ID=LTnewLM_210027000.1:pep;Derives_from=LTnewLM_210027000.1;orthologous_to=LmjF.21.1730_mRNA;ortholog_cluster=OG0002241;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 723984 725132 1 + . ID=LTnewLM_210027100 LTnewLM_21 AUGUSTUS mRNA 723984 725132 1 + . ID=LTnewLM_210027100.1;Parent=LTnewLM_210027100 LTnewLM_21 AUGUSTUS CDS 723984 725132 1 + 0 ID=LTnewLM_210027100.1:CDS:1;Parent=LTnewLM_210027100.1 ### LTnewLM_21 . polypeptide 723984 725132 . + . ID=LTnewLM_210027100.1:pep;Derives_from=LTnewLM_210027100.1;orthologous_to=LmjF.21.1740_mRNA;ortholog_cluster=OG0002242;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 725715 726872 1 + . ID=LTnewLM_210027200 LTnewLM_21 AUGUSTUS mRNA 725715 726872 1 + . ID=LTnewLM_210027200.1;Parent=LTnewLM_210027200 LTnewLM_21 AUGUSTUS CDS 725715 726872 1 + 0 ID=LTnewLM_210027200.1:CDS:1;Parent=LTnewLM_210027200.1 ### LTnewLM_21 . polypeptide 725715 726872 . + . ID=LTnewLM_210027200.1:pep;Derives_from=LTnewLM_210027200.1;orthologous_to=LmjF.21.1750_mRNA;ortholog_cluster=OG0002243;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 727947 729239 1 + . ID=LTnewLM_210027300 LTnewLM_21 AUGUSTUS mRNA 727947 729239 1 + . ID=LTnewLM_210027300.1;Parent=LTnewLM_210027300 LTnewLM_21 AUGUSTUS CDS 727947 729239 1 + 0 ID=LTnewLM_210027300.1:CDS:1;Parent=LTnewLM_210027300.1 ### LTnewLM_21 . polypeptide 727947 729239 . + . ID=LTnewLM_210027300.1:pep;Derives_from=LTnewLM_210027300.1;orthologous_to=LmjF.21.1760_mRNA;ortholog_cluster=OG0002244;product=term%3DDKCLD (NUC011) domain/TruB family pseudouridylate synthase (N terminal domain)/tRNA pseudouridylate synthase B C-terminal domain/PUA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08068|Pfam:PF01509|Pfam:PF16198|Pfam:PF01472;Ontology_term=GO:0006396,GO:0003723 LTnewLM_21 Pfam protein_match 728037 728204 . + . Parent=LTnewLM_210027300.1:pep;Name=PF08068;signature_desc=DKCLD (NUC011) domain LTnewLM_21 Pfam protein_match 728217 728378 . + . Parent=LTnewLM_210027300.1:pep;Name=PF01509;signature_desc=TruB family pseudouridylate synthase (N terminal domain);Ontology_term=GO:0006396 LTnewLM_21 Pfam protein_match 728565 728762 . + . Parent=LTnewLM_210027300.1:pep;Name=PF16198;signature_desc=tRNA pseudouridylate synthase B C-terminal domain LTnewLM_21 Pfam protein_match 728775 728993 . + . Parent=LTnewLM_210027300.1:pep;Name=PF01472;signature_desc=PUA domain;Ontology_term=GO:0003723 ### LTnewLM_21 Liftoff gene 730633 731545 . + . ID=LTnewLM_210027400;coverage=1.0;sequence_ID=0.976;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.21.1770_0 LTnewLM_21 Liftoff mRNA 730633 731545 . + . ID=LTnewLM_210027400.1;Parent=LTnewLM_210027400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_21 Liftoff CDS 730633 731545 . + 0 ID=LTnewLM_210027400.1:CDS:1;Parent=LTnewLM_210027400.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 730633 731545 . + . ID=LTnewLM_210027400.1:pep;Derives_from=LTnewLM_210027400.1;orthologous_to=LmjF.21.1770_mRNA;ortholog_cluster=OG0002245;product=term%3DATP synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00231;Ontology_term=GO:0046961,GO:0046933,GO:0045261,GO:0015986 LTnewLM_21 Pfam protein_match 730645 731478 . + . Parent=LTnewLM_210027400.1:pep;Name=PF00231;signature_desc=ATP synthase;Ontology_term=GO:0046933,GO:0046961,GO:0015986,GO:0045261 ### LTnewLM_21 AUGUSTUS gene 732464 733213 1 + . ID=LTnewLM_210027500 LTnewLM_21 AUGUSTUS mRNA 732464 733213 1 + . ID=LTnewLM_210027500.1;Parent=LTnewLM_210027500 LTnewLM_21 AUGUSTUS CDS 732464 733213 1 + 0 ID=LTnewLM_210027500.1:CDS:1;Parent=LTnewLM_210027500.1 ### LTnewLM_21 . polypeptide 732464 733213 . + . ID=LTnewLM_210027500.1:pep;Derives_from=LTnewLM_210027500.1;orthologous_to=LTnewLM_350025400.1,LmjF.21.1780_mRNA,LmjF.35.2010_mRNA;ortholog_cluster=OG0000157;product=term%3DRibosomal protein S6e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01092;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 732464 732847 . + . Parent=LTnewLM_210027500.1:pep;Name=PF01092;signature_desc=Ribosomal protein S6e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 . pseudogene 734126 734695 . + . ID=LTnewLM_210027600:pseudogene;coverage=1.0;sequence_ID=0.973;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1790_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 734126 734695 . + . ID=LTnewLM_210027600.1;Parent=LTnewLM_210027600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 734126 734695 . + . ID=LTnewLM_210027600.1:pseudogenic_exon:1;Parent=LTnewLM_210027600.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 734126 734695 . + . ID=LTnewLM_210027600.1:pep;Derives_from=LTnewLM_210027600.1;orthologous_to=LTnewLM_210027700.1,LmjF.21.1790_mRNA,LmjF.21.1800_mRNA;ortholog_cluster=OG0000287;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_21 Pfam protein_match 734234 734410 . + . Parent=LTnewLM_210027600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 LTnewLM_21 Pfam protein_match 734471 734647 . + . Parent=LTnewLM_210027600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_21 . pseudogene 736224 736793 . + . ID=LTnewLM_210027700:pseudogene;coverage=1.0;sequence_ID=0.970;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.21.1800_0;has_internal_stop=true LTnewLM_21 . pseudogenic_transcript 736224 736793 . + . ID=LTnewLM_210027700.1;Parent=LTnewLM_210027700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_21 . pseudogenic_exon 736224 736793 . + . ID=LTnewLM_210027700.1:pseudogenic_exon:1;Parent=LTnewLM_210027700.1;extra_copy_number=0 ### LTnewLM_21 . polypeptide 736224 736793 . + . ID=LTnewLM_210027700.1:pep;Derives_from=LTnewLM_210027700.1;orthologous_to=LTnewLM_210027600.1,LmjF.21.1790_mRNA,LmjF.21.1800_mRNA;ortholog_cluster=OG0000287;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_21 Pfam protein_match 736332 736508 . + . Parent=LTnewLM_210027700.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 LTnewLM_21 Pfam protein_match 736569 736745 . + . Parent=LTnewLM_210027700.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_21 AUGUSTUS gene 738216 739610 1 + . ID=LTnewLM_210027800 LTnewLM_21 AUGUSTUS mRNA 738216 739610 1 + . ID=LTnewLM_210027800.1;Parent=LTnewLM_210027800 LTnewLM_21 AUGUSTUS CDS 738216 739610 1 + 0 ID=LTnewLM_210027800.1:CDS:1;Parent=LTnewLM_210027800.1 ### LTnewLM_21 . polypeptide 738216 739610 . + . ID=LTnewLM_210027800.1:pep;Derives_from=LTnewLM_210027800.1;orthologous_to=LmjF.21.1810_mRNA;ortholog_cluster=OG0002246;product=term%3DGaa1-like%2C GPI transamidase component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04114;Ontology_term=GO:0042765,GO:0016021 LTnewLM_21 Pfam protein_match 738621 739127 . + . Parent=LTnewLM_210027800.1:pep;Name=PF04114;signature_desc=Gaa1-like%2C GPI transamidase component;Ontology_term=GO:0016021,GO:0042765 ### LTnewLM_21 AUGUSTUS gene 740181 740459 1 + . ID=LTnewLM_210027900 LTnewLM_21 AUGUSTUS mRNA 740181 740459 1 + . ID=LTnewLM_210027900.1;Parent=LTnewLM_210027900 LTnewLM_21 AUGUSTUS CDS 740181 740459 1 + 0 ID=LTnewLM_210027900.1:CDS:1;Parent=LTnewLM_210027900.1 ### LTnewLM_21 . polypeptide 740181 740459 . + . ID=LTnewLM_210027900.1:pep;Derives_from=LTnewLM_210027900.1;orthologous_to=LTnewLM_360026200.1,LmjF.21.1820_mRNA,LmjF.36.1925_mRNA;ortholog_cluster=OG0000158;product=term%3DRibosomal L37ae protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01780;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_21 Pfam protein_match 740190 740441 . + . Parent=LTnewLM_210027900.1:pep;Name=PF01780;signature_desc=Ribosomal L37ae protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_21 AUGUSTUS gene 741267 742001 1 + . ID=LTnewLM_210028000 LTnewLM_21 AUGUSTUS mRNA 741267 742001 1 + . ID=LTnewLM_210028000.1;Parent=LTnewLM_210028000 LTnewLM_21 AUGUSTUS CDS 741267 742001 1 + 0 ID=LTnewLM_210028000.1:CDS:1;Parent=LTnewLM_210028000.1 ### LTnewLM_21 . polypeptide 741267 742001 . + . ID=LTnewLM_210028000.1:pep;Derives_from=LTnewLM_210028000.1;orthologous_to=LmjF.21.1830_mRNA;ortholog_cluster=OG0002247;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_21 Pfam protein_match 741288 741353 . + . Parent=LTnewLM_210028000.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 LTnewLM_21 Pfam protein_match 741357 741923 . + . Parent=LTnewLM_210028000.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_21 AUGUSTUS gene 743415 744809 1 + . ID=LTnewLM_210028100 LTnewLM_21 AUGUSTUS mRNA 743415 744809 1 + . ID=LTnewLM_210028100.1;Parent=LTnewLM_210028100 LTnewLM_21 AUGUSTUS CDS 743415 744809 1 + 0 ID=LTnewLM_210028100.1:CDS:1;Parent=LTnewLM_210028100.1 ### LTnewLM_21 . polypeptide 743415 744809 . + . ID=LTnewLM_210028100.1:pep;Derives_from=LTnewLM_210028100.1;orthologous_to=LmjF.21.1840_mRNA;ortholog_cluster=OG0002248;product=term%3DPex14 N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04695 LTnewLM_21 Pfam protein_match 743502 743630 . + . Parent=LTnewLM_210028100.1:pep;Name=PF04695;signature_desc=Pex14 N-terminal domain ### LTnewLM_21 AUGUSTUS gene 745529 748579 1 + . ID=LTnewLM_210028200 LTnewLM_21 AUGUSTUS mRNA 745529 748579 1 + . ID=LTnewLM_210028200.1;Parent=LTnewLM_210028200 LTnewLM_21 AUGUSTUS CDS 745529 748579 1 + 0 ID=LTnewLM_210028200.1:CDS:1;Parent=LTnewLM_210028200.1 ### LTnewLM_21 . polypeptide 745529 748579 . + . ID=LTnewLM_210028200.1:pep;Derives_from=LTnewLM_210028200.1;orthologous_to=LmjF.21.1850_mRNA;ortholog_cluster=OG0002249;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_21 AUGUSTUS gene 749250 749489 1 + . ID=LTnewLM_210028300 LTnewLM_21 AUGUSTUS mRNA 749250 749489 1 + . ID=LTnewLM_210028300.1;Parent=LTnewLM_210028300 LTnewLM_21 AUGUSTUS CDS 749250 749489 1 + 0 ID=LTnewLM_210028300.1:CDS:1;Parent=LTnewLM_210028300.1 ### LTnewLM_21 . polypeptide 749250 749489 . + . ID=LTnewLM_210028300.1:pep;Derives_from=LTnewLM_210028300.1;orthologous_to=LmjF.21.1855_mRNA;ortholog_cluster=OG0002250;product=term%3DBolA-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01722 LTnewLM_21 Pfam protein_match 749283 749477 . + . Parent=LTnewLM_210028300.1:pep;Name=PF01722;signature_desc=BolA-like protein ### LTnewLM_21 AUGUSTUS gene 753308 754639 1 + . ID=LTnewLM_210028400 LTnewLM_21 AUGUSTUS mRNA 753308 754639 1 + . ID=LTnewLM_210028400.1;Parent=LTnewLM_210028400 LTnewLM_21 AUGUSTUS CDS 753308 754639 1 + 0 ID=LTnewLM_210028400.1:CDS:1;Parent=LTnewLM_210028400.1 ### LTnewLM_21 . polypeptide 753308 754639 . + . ID=LTnewLM_210028400.1:pep;Derives_from=LTnewLM_210028400.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_21 Pfam protein_match 753314 753937 . + . Parent=LTnewLM_210028400.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_21 Pfam protein_match 754088 754447 . + . Parent=LTnewLM_210028400.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_21 AUGUSTUS gene 756553 758445 1 + . ID=LTnewLM_210028500 LTnewLM_21 AUGUSTUS mRNA 756553 758445 1 + . ID=LTnewLM_210028500.1;Parent=LTnewLM_210028500 LTnewLM_21 AUGUSTUS CDS 756553 758445 1 + 0 ID=LTnewLM_210028500.1:CDS:1;Parent=LTnewLM_210028500.1 ### LTnewLM_21 . polypeptide 756553 758445 . + . ID=LTnewLM_210028500.1:pep;Derives_from=LTnewLM_210028500.1;orthologous_to=LmjF.21.1870_mRNA;ortholog_cluster=OG0002251;product=term%3DHistone deacetylase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00850 LTnewLM_21 Pfam protein_match 756910 757569 . + . Parent=LTnewLM_210028500.1:pep;Name=PF00850;signature_desc=Histone deacetylase domain LTnewLM_21 Pfam protein_match 757945 758310 . + . Parent=LTnewLM_210028500.1:pep;Name=PF00850;signature_desc=Histone deacetylase domain ### LTnewLM_21 AUGUSTUS gene 759873 760604 1 + . ID=LTnewLM_210028600 LTnewLM_21 AUGUSTUS mRNA 759873 760604 1 + . ID=LTnewLM_210028600.1;Parent=LTnewLM_210028600 LTnewLM_21 AUGUSTUS CDS 759873 760604 1 + 0 ID=LTnewLM_210028600.1:CDS:1;Parent=LTnewLM_210028600.1 ### LTnewLM_21 . polypeptide 759873 760604 . + . ID=LTnewLM_210028600.1:pep;Derives_from=LTnewLM_210028600.1;orthologous_to=LTnewLM_170022700.1,LmjF.17.1470_mRNA,LmjF.21.1880_mRNA;ortholog_cluster=OG0000159;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . contig 1 742832 . + . Name=LTnewLM_CTG000022 LTnewLM_22 . pseudogene 3489 5415 . - . ID=LTnewLM_220005000:pseudogene;coverage=0.998;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.1300_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 3489 5415 . - . ID=LTnewLM_220005000.1;Parent=LTnewLM_220005000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 3489 5415 . - . ID=LTnewLM_220005000.1:pseudogenic_exon:1;Parent=LTnewLM_220005000.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 3489 5415 . - . ID=LTnewLM_220005000.1:pep;Derives_from=LTnewLM_220005000.1;orthologous_to=LTnewLM_040009600.1,LTnewLM_060019200.1,LmjF.06.1300_mRNA,LmjF.22.0010_mRNA;ortholog_cluster=OG0000099;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 10194 10553 1 + . ID=LTnewLM_220005100 LTnewLM_22 AUGUSTUS mRNA 10194 10553 1 + . ID=LTnewLM_220005100.1;Parent=LTnewLM_220005100 LTnewLM_22 AUGUSTUS CDS 10194 10553 1 + 0 ID=LTnewLM_220005100.1:CDS:1;Parent=LTnewLM_220005100.1 ### LTnewLM_22 . polypeptide 10194 10553 . + . ID=LTnewLM_220005100.1:pep;Derives_from=LTnewLM_220005100.1;orthologous_to=LTnewLM_060019100.1,LmjF.06.1290_mRNA;ortholog_cluster=OG0000381;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_22 Pfam protein_match 10218 10382 . + . Parent=LTnewLM_220005100.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_22 AUGUSTUS gene 11276 11710 1 - . ID=LTnewLM_220005200 LTnewLM_22 AUGUSTUS mRNA 11276 11710 1 - . ID=LTnewLM_220005200.1;Parent=LTnewLM_220005200 LTnewLM_22 AUGUSTUS CDS 11276 11710 1 - 0 ID=LTnewLM_220005200.1:CDS:1;Parent=LTnewLM_220005200.1 ### LTnewLM_22 . polypeptide 11276 11710 . - . ID=LTnewLM_220005200.1:pep;Derives_from=LTnewLM_220005200.1;orthologous_to=LmjF.22.0020_mRNA;ortholog_cluster=OG0002252;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 12378 12944 1 - . ID=LTnewLM_220005300 LTnewLM_22 AUGUSTUS mRNA 12378 12944 1 - . ID=LTnewLM_220005300.1;Parent=LTnewLM_220005300 LTnewLM_22 AUGUSTUS CDS 12378 12944 1 - 0 ID=LTnewLM_220005300.1:CDS:1;Parent=LTnewLM_220005300.1 ### LTnewLM_22 . polypeptide 12378 12944 . - . ID=LTnewLM_220005300.1:pep;Derives_from=LTnewLM_220005300.1;orthologous_to=LTnewLM_040009900.1,LmjF.04.0470_mRNA,LmjF.22.0030_mRNA;ortholog_cluster=OG0000160;product=term%3DRibosomal protein L5/ribosomal L5P family C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00281|Pfam:PF00673;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_22 Pfam protein_match 12456 12749 . - . Parent=LTnewLM_220005300.1:pep;Name=PF00673;signature_desc=ribosomal L5P family C-terminus;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_22 Pfam protein_match 12762 12920 . - . Parent=LTnewLM_220005300.1:pep;Name=PF00281;signature_desc=Ribosomal protein L5;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 14117 14980 1 - . ID=LTnewLM_220005400 LTnewLM_22 AUGUSTUS mRNA 14117 14980 1 - . ID=LTnewLM_220005400.1;Parent=LTnewLM_220005400 LTnewLM_22 AUGUSTUS CDS 14117 14980 1 - 0 ID=LTnewLM_220005400.1:CDS:1;Parent=LTnewLM_220005400.1 ### LTnewLM_22 . polypeptide 14117 14980 . - . ID=LTnewLM_220005400.1:pep;Derives_from=LTnewLM_220005400.1;orthologous_to=LmjF.22.0040_mRNA;ortholog_cluster=OG0002253;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_22 Pfam protein_match 14207 14752 . - . Parent=LTnewLM_220005400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_22 AUGUSTUS gene 15584 17329 1 - . ID=LTnewLM_220005500 LTnewLM_22 AUGUSTUS mRNA 15584 17329 1 - . ID=LTnewLM_220005500.1;Parent=LTnewLM_220005500 LTnewLM_22 AUGUSTUS CDS 15584 17329 1 - 0 ID=LTnewLM_220005500.1:CDS:1;Parent=LTnewLM_220005500.1 ### LTnewLM_22 . polypeptide 15584 17329 . - . ID=LTnewLM_220005500.1:pep;Derives_from=LTnewLM_220005500.1;orthologous_to=LmjF.22.0050_mRNA;ortholog_cluster=OG0002254;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 18491 20809 1 - . ID=LTnewLM_220005600 LTnewLM_22 AUGUSTUS mRNA 18491 20809 1 - . ID=LTnewLM_220005600.1;Parent=LTnewLM_220005600 LTnewLM_22 AUGUSTUS CDS 18491 20809 1 - 0 ID=LTnewLM_220005600.1:CDS:1;Parent=LTnewLM_220005600.1 ### LTnewLM_22 . polypeptide 18491 20809 . - . ID=LTnewLM_220005600.1:pep;Derives_from=LTnewLM_220005600.1;orthologous_to=LmjF.22.0060_mRNA;ortholog_cluster=OG0002255;product=term%3DNF-X1 type zinc finger/R3H domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01422|Pfam:PF01424;Ontology_term=GO:0008270,GO:0003700,GO:0005634,GO:0003676,GO:0006355 LTnewLM_22 Pfam protein_match 18830 19000 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01424;signature_desc=R3H domain;Ontology_term=GO:0003676 LTnewLM_22 Pfam protein_match 19238 19291 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 19325 19384 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 19661 19711 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 19781 19810 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 19922 19972 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 20093 20146 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 20255 20308 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_22 Pfam protein_match 20423 20494 . - . Parent=LTnewLM_220005600.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 ### LTnewLM_22 AUGUSTUS gene 21729 22598 1 - . ID=LTnewLM_220005700 LTnewLM_22 AUGUSTUS mRNA 21729 22598 1 - . ID=LTnewLM_220005700.1;Parent=LTnewLM_220005700 LTnewLM_22 AUGUSTUS CDS 21729 22598 1 - 0 ID=LTnewLM_220005700.1:CDS:1;Parent=LTnewLM_220005700.1 ### LTnewLM_22 . polypeptide 21729 22598 . - . ID=LTnewLM_220005700.1:pep;Derives_from=LTnewLM_220005700.1;orthologous_to=LmjF.22.0070_mRNA;ortholog_cluster=OG0002256;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 24702 25697 1 - . ID=LTnewLM_220005800 LTnewLM_22 AUGUSTUS mRNA 24702 25697 1 - . ID=LTnewLM_220005800.1;Parent=LTnewLM_220005800 LTnewLM_22 AUGUSTUS CDS 24702 25697 1 - 0 ID=LTnewLM_220005800.1:CDS:1;Parent=LTnewLM_220005800.1 ### LTnewLM_22 . polypeptide 24702 25697 . - . ID=LTnewLM_220005800.1:pep;Derives_from=LTnewLM_220005800.1;orthologous_to=LmjF.22.0080_mRNA;ortholog_cluster=OG0002257;product=term%3DDnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_22 Pfam protein_match 24909 25580 . - . Parent=LTnewLM_220005800.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_22 Pfam protein_match 25299 25505 . - . Parent=LTnewLM_220005800.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 ### LTnewLM_22 AUGUSTUS gene 26411 29545 1 - . ID=LTnewLM_220005900 LTnewLM_22 AUGUSTUS mRNA 26411 29545 1 - . ID=LTnewLM_220005900.1;Parent=LTnewLM_220005900 LTnewLM_22 AUGUSTUS CDS 26411 29545 1 - 0 ID=LTnewLM_220005900.1:CDS:1;Parent=LTnewLM_220005900.1 ### LTnewLM_22 . polypeptide 26411 29545 . - . ID=LTnewLM_220005900.1:pep;Derives_from=LTnewLM_220005900.1;orthologous_to=LmjF.22.0090_mRNA;ortholog_cluster=OG0002258;product=term%3DmRNA capping enzyme%2C C-terminal domain/mRNA capping enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03919|Pfam:PF03291;Ontology_term=GO:0004484 LTnewLM_22 Pfam protein_match 26477 27403 . - . Parent=LTnewLM_220005900.1:pep;Name=PF03291;signature_desc=mRNA capping enzyme LTnewLM_22 Pfam protein_match 28037 28225 . - . Parent=LTnewLM_220005900.1:pep;Name=PF03919;signature_desc=mRNA capping enzyme%2C C-terminal domain;Ontology_term=GO:0004484 ### LTnewLM_22 AUGUSTUS gene 42856 43587 1 - . ID=LTnewLM_220006000 LTnewLM_22 AUGUSTUS mRNA 42856 43587 1 - . ID=LTnewLM_220006000.1;Parent=LTnewLM_220006000 LTnewLM_22 AUGUSTUS CDS 42856 43587 1 - 0 ID=LTnewLM_220006000.1:CDS:1;Parent=LTnewLM_220006000.1 ### LTnewLM_22 . polypeptide 42856 43587 . - . ID=LTnewLM_220006000.1:pep;Derives_from=LTnewLM_220006000.1;orthologous_to=LmjF.22.0100_mRNA;ortholog_cluster=OG0002259;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 46156 48126 1 - . ID=LTnewLM_220006100 LTnewLM_22 AUGUSTUS mRNA 46156 48126 1 - . ID=LTnewLM_220006100.1;Parent=LTnewLM_220006100 LTnewLM_22 AUGUSTUS CDS 46156 48126 1 - 0 ID=LTnewLM_220006100.1:CDS:1;Parent=LTnewLM_220006100.1 ### LTnewLM_22 . polypeptide 46156 48126 . - . ID=LTnewLM_220006100.1:pep;Derives_from=LTnewLM_220006100.1;orthologous_to=LmjF.22.0110_mRNA;ortholog_cluster=OG0002260;product=term%3DGlutamine amidotransferase class-I/Peptidase C26/GMP synthase C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00117|Pfam:PF07722|Pfam:PF00958;Ontology_term=GO:0006164,GO:0003922,GO:0006177,GO:0005524,GO:0006541,GO:0016787 LTnewLM_22 Pfam protein_match 46165 46410 . - . Parent=LTnewLM_220006100.1:pep;Name=PF00958;signature_desc=GMP synthase C terminal domain;Ontology_term=GO:0003922,GO:0005524,GO:0006164,GO:0006177 LTnewLM_22 Pfam protein_match 47551 48087 . - . Parent=LTnewLM_220006100.1:pep;Name=PF00117;signature_desc=Glutamine amidotransferase class-I LTnewLM_22 Pfam protein_match 47596 47928 . - . Parent=LTnewLM_220006100.1:pep;Name=PF07722;signature_desc=Peptidase C26;Ontology_term=GO:0016787,GO:0006541 ### LTnewLM_22 AUGUSTUS gene 48790 49038 1 - . ID=LTnewLM_220006200 LTnewLM_22 AUGUSTUS mRNA 48790 49038 1 - . ID=LTnewLM_220006200.1;Parent=LTnewLM_220006200 LTnewLM_22 AUGUSTUS CDS 48790 49038 1 - 0 ID=LTnewLM_220006200.1:CDS:1;Parent=LTnewLM_220006200.1 ### LTnewLM_22 . polypeptide 48790 49038 . - . ID=LTnewLM_220006200.1:pep;Derives_from=LTnewLM_220006200.1;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_22 Pfam protein_match 48826 49026 . - . Parent=LTnewLM_220006200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_22 AUGUSTUS gene 49964 50698 1 - . ID=LTnewLM_220006300 LTnewLM_22 AUGUSTUS mRNA 49964 50698 1 - . ID=LTnewLM_220006300.1;Parent=LTnewLM_220006300 LTnewLM_22 AUGUSTUS CDS 49964 50698 1 - 0 ID=LTnewLM_220006300.1:CDS:1;Parent=LTnewLM_220006300.1 ### LTnewLM_22 . polypeptide 49964 50698 . - . ID=LTnewLM_220006300.1:pep;Derives_from=LTnewLM_220006300.1;orthologous_to=LmjF.22.0120_mRNA;ortholog_cluster=OG0002261;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 57889 59325 1 - . ID=LTnewLM_220006400 LTnewLM_22 AUGUSTUS mRNA 57889 59325 1 - . ID=LTnewLM_220006400.1;Parent=LTnewLM_220006400 LTnewLM_22 AUGUSTUS CDS 57889 59325 1 - 0 ID=LTnewLM_220006400.1:CDS:1;Parent=LTnewLM_220006400.1 ### LTnewLM_22 . polypeptide 57889 59325 . - . ID=LTnewLM_220006400.1:pep;Derives_from=LTnewLM_220006400.1;product=term%3Dhypothetical protein ### LTnewLM_22 . pseudogene 61916 63570 . - . ID=LTnewLM_220006500:pseudogene;coverage=0.993;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0140_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 61916 63570 . - . ID=LTnewLM_220006500.1;Parent=LTnewLM_220006500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 61916 63570 . - . ID=LTnewLM_220006500.1:pseudogenic_exon:1;Parent=LTnewLM_220006500.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 61916 63570 . - . ID=LTnewLM_220006500.1:pep;Derives_from=LTnewLM_220006500.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 64415 65842 1 - . ID=LTnewLM_220006600 LTnewLM_22 AUGUSTUS mRNA 64415 65842 1 - . ID=LTnewLM_220006600.1;Parent=LTnewLM_220006600 LTnewLM_22 AUGUSTUS CDS 64415 65842 1 - 0 ID=LTnewLM_220006600.1:CDS:1;Parent=LTnewLM_220006600.1 ### LTnewLM_22 . polypeptide 64415 65842 . - . ID=LTnewLM_220006600.1:pep;Derives_from=LTnewLM_220006600.1;orthologous_to=LmjF.22.0150_mRNA;ortholog_cluster=OG0002262;product=term%3DSister chromatid cohesion protein Dcc1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09724 LTnewLM_22 Pfam protein_match 64523 65797 . - . Parent=LTnewLM_220006600.1:pep;Name=PF09724;signature_desc=Sister chromatid cohesion protein Dcc1 ### LTnewLM_22 AUGUSTUS gene 69088 70320 1 - . ID=LTnewLM_220006700 LTnewLM_22 AUGUSTUS mRNA 69088 70320 1 - . ID=LTnewLM_220006700.1;Parent=LTnewLM_220006700 LTnewLM_22 AUGUSTUS CDS 69088 70320 1 - 0 ID=LTnewLM_220006700.1:CDS:1;Parent=LTnewLM_220006700.1 ### LTnewLM_22 . polypeptide 69088 70320 . - . ID=LTnewLM_220006700.1:pep;Derives_from=LTnewLM_220006700.1;orthologous_to=LmjF.22.0160_mRNA;ortholog_cluster=OG0002263;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_22 Pfam protein_match 69514 69585 . - . Parent=LTnewLM_220006700.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_22 AUGUSTUS gene 73211 76771 1 - . ID=LTnewLM_220006800 LTnewLM_22 AUGUSTUS mRNA 73211 76771 1 - . ID=LTnewLM_220006800.1;Parent=LTnewLM_220006800 LTnewLM_22 AUGUSTUS CDS 73211 76771 1 - 0 ID=LTnewLM_220006800.1:CDS:1;Parent=LTnewLM_220006800.1 ### LTnewLM_22 . polypeptide 73211 76771 . - . ID=LTnewLM_220006800.1:pep;Derives_from=LTnewLM_220006800.1;orthologous_to=LmjF.22.0170_mRNA;ortholog_cluster=OG0002264;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 81099 81881 1 - . ID=LTnewLM_220006900 LTnewLM_22 AUGUSTUS mRNA 81099 81881 1 - . ID=LTnewLM_220006900.1;Parent=LTnewLM_220006900 LTnewLM_22 AUGUSTUS CDS 81099 81881 1 - 0 ID=LTnewLM_220006900.1:CDS:1;Parent=LTnewLM_220006900.1 ### LTnewLM_22 . polypeptide 81099 81881 . - . ID=LTnewLM_220006900.1:pep;Derives_from=LTnewLM_220006900.1;orthologous_to=LmjF.22.0180_mRNA;ortholog_cluster=OG0002265;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 85309 86655 1 - . ID=LTnewLM_220007000 LTnewLM_22 AUGUSTUS mRNA 85309 86655 1 - . ID=LTnewLM_220007000.1;Parent=LTnewLM_220007000 LTnewLM_22 AUGUSTUS CDS 85309 86655 1 - 0 ID=LTnewLM_220007000.1:CDS:1;Parent=LTnewLM_220007000.1 ### LTnewLM_22 . polypeptide 85309 86655 . - . ID=LTnewLM_220007000.1:pep;Derives_from=LTnewLM_220007000.1;orthologous_to=LmjF.22.0190_mRNA;ortholog_cluster=OG0002266;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 88163 92773 1 - . ID=LTnewLM_220007100 LTnewLM_22 AUGUSTUS mRNA 88163 92773 1 - . ID=LTnewLM_220007100.1;Parent=LTnewLM_220007100 LTnewLM_22 AUGUSTUS CDS 88163 92773 1 - 0 ID=LTnewLM_220007100.1:CDS:1;Parent=LTnewLM_220007100.1 ### LTnewLM_22 . polypeptide 88163 92773 . - . ID=LTnewLM_220007100.1:pep;Derives_from=LTnewLM_220007100.1;orthologous_to=LmjF.22.0210_mRNA;ortholog_cluster=OG0002267;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 94161 96845 1 - . ID=LTnewLM_220007200 LTnewLM_22 AUGUSTUS mRNA 94161 96845 1 - . ID=LTnewLM_220007200.1;Parent=LTnewLM_220007200 LTnewLM_22 AUGUSTUS CDS 94161 96845 1 - 0 ID=LTnewLM_220007200.1:CDS:1;Parent=LTnewLM_220007200.1 ### LTnewLM_22 . polypeptide 94161 96845 . - . ID=LTnewLM_220007200.1:pep;Derives_from=LTnewLM_220007200.1;orthologous_to=LmjF.22.0220_mRNA;ortholog_cluster=OG0002268;product=term%3DProtein O-mannosyl-transferase TMTC%2C DUF1736%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08409 LTnewLM_22 Pfam protein_match 95667 95882 . - . Parent=LTnewLM_220007200.1:pep;Name=PF08409;signature_desc=Protein O-mannosyl-transferase TMTC%2C DUF1736 ### LTnewLM_22 AUGUSTUS gene 103831 105288 1 - . ID=LTnewLM_220007300 LTnewLM_22 AUGUSTUS mRNA 103831 105288 1 - . ID=LTnewLM_220007300.1;Parent=LTnewLM_220007300 LTnewLM_22 AUGUSTUS CDS 103831 105288 1 - 0 ID=LTnewLM_220007300.1:CDS:1;Parent=LTnewLM_220007300.1 ### LTnewLM_22 . polypeptide 103831 105288 . - . ID=LTnewLM_220007300.1:pep;Derives_from=LTnewLM_220007300.1;orthologous_to=LmjF.22.0230_mRNA;ortholog_cluster=OG0002269;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_22 Pfam protein_match 103849 105024 . - . Parent=LTnewLM_220007300.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_22 Pfam protein_match 104530 105018 . - . Parent=LTnewLM_220007300.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_22 AUGUSTUS gene 106781 107770 1 - . ID=LTnewLM_220007400 LTnewLM_22 AUGUSTUS mRNA 106781 107770 1 - . ID=LTnewLM_220007400.1;Parent=LTnewLM_220007400 LTnewLM_22 AUGUSTUS CDS 106781 107770 1 - 0 ID=LTnewLM_220007400.1:CDS:1;Parent=LTnewLM_220007400.1 ### LTnewLM_22 . polypeptide 106781 107770 . - . ID=LTnewLM_220007400.1:pep;Derives_from=LTnewLM_220007400.1;orthologous_to=LmjF.22.0240_mRNA;ortholog_cluster=OG0002270;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 110164 110940 1 - . ID=LTnewLM_220007500 LTnewLM_22 AUGUSTUS mRNA 110164 110940 1 - . ID=LTnewLM_220007500.1;Parent=LTnewLM_220007500 LTnewLM_22 AUGUSTUS CDS 110164 110940 1 - 0 ID=LTnewLM_220007500.1:CDS:1;Parent=LTnewLM_220007500.1 ### LTnewLM_22 . polypeptide 110164 110940 . - . ID=LTnewLM_220007500.1:pep;Derives_from=LTnewLM_220007500.1;orthologous_to=LmjF.22.0250_mRNA;ortholog_cluster=OG0002271;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13350 LTnewLM_22 Pfam protein_match 110191 110916 . - . Parent=LTnewLM_220007500.1:pep;Name=PF13350;signature_desc=Tyrosine phosphatase family ### LTnewLM_22 AUGUSTUS gene 113758 114606 1 - . ID=LTnewLM_220007600 LTnewLM_22 AUGUSTUS mRNA 113758 114606 1 - . ID=LTnewLM_220007600.1;Parent=LTnewLM_220007600 LTnewLM_22 AUGUSTUS CDS 113758 114606 1 - 0 ID=LTnewLM_220007600.1:CDS:1;Parent=LTnewLM_220007600.1 ### LTnewLM_22 . polypeptide 113758 114606 . - . ID=LTnewLM_220007600.1:pep;Derives_from=LTnewLM_220007600.1;orthologous_to=LmjF.22.0260_mRNA;ortholog_cluster=OG0002272;product=term%3DTranslocon-associated protein (TRAP)%2C alpha subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03896;Ontology_term=GO:0005789 LTnewLM_22 Pfam protein_match 113881 114489 . - . Parent=LTnewLM_220007600.1:pep;Name=PF03896;signature_desc=Translocon-associated protein (TRAP)%2C alpha subunit;Ontology_term=GO:0005789 ### LTnewLM_22 AUGUSTUS gene 116057 116284 1 - . ID=LTnewLM_220007700 LTnewLM_22 AUGUSTUS mRNA 116057 116284 1 - . ID=LTnewLM_220007700.1;Parent=LTnewLM_220007700 LTnewLM_22 AUGUSTUS CDS 116057 116284 1 - 0 ID=LTnewLM_220007700.1:CDS:1;Parent=LTnewLM_220007700.1 ### LTnewLM_22 . polypeptide 116057 116284 . - . ID=LTnewLM_220007700.1:pep;Derives_from=LTnewLM_220007700.1;orthologous_to=LmjF.22.0270_mRNA;ortholog_cluster=OG0002273;product=term%3DTim10/DDP family zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02953 LTnewLM_22 Pfam protein_match 116099 116266 . - . Parent=LTnewLM_220007700.1:pep;Name=PF02953;signature_desc=Tim10/DDP family zinc finger ### LTnewLM_22 . pseudogene 118499 118903 . - . ID=LTnewLM_220007800:pseudogene;coverage=1.0;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0275_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 118499 118903 . - . ID=LTnewLM_220007800.1;Parent=LTnewLM_220007800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 118499 118903 . - . ID=LTnewLM_220007800.1:pseudogenic_exon:1;Parent=LTnewLM_220007800.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 118499 118903 . - . ID=LTnewLM_220007800.1:pep;Derives_from=LTnewLM_220007800.1;orthologous_to=LmjF.22.0275_mRNA;ortholog_cluster=OG0007506;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 120568 123093 1 - . ID=LTnewLM_220007900 LTnewLM_22 AUGUSTUS mRNA 120568 123093 1 - . ID=LTnewLM_220007900.1;Parent=LTnewLM_220007900 LTnewLM_22 AUGUSTUS CDS 120568 123093 1 - 0 ID=LTnewLM_220007900.1:CDS:1;Parent=LTnewLM_220007900.1 ### LTnewLM_22 . polypeptide 120568 123093 . - . ID=LTnewLM_220007900.1:pep;Derives_from=LTnewLM_220007900.1;orthologous_to=LmjF.22.0280_mRNA;ortholog_cluster=OG0002274;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 124253 125647 1 - . ID=LTnewLM_220008000 LTnewLM_22 AUGUSTUS mRNA 124253 125647 1 - . ID=LTnewLM_220008000.1;Parent=LTnewLM_220008000 LTnewLM_22 AUGUSTUS CDS 124253 125647 1 - 0 ID=LTnewLM_220008000.1:CDS:1;Parent=LTnewLM_220008000.1 ### LTnewLM_22 . polypeptide 124253 125647 . - . ID=LTnewLM_220008000.1:pep;Derives_from=LTnewLM_220008000.1;orthologous_to=LmjF.22.0290_mRNA;ortholog_cluster=OG0002275;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_22 Pfam protein_match 125075 125290 . - . Parent=LTnewLM_220008000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_22 AUGUSTUS gene 127064 128749 1 - . ID=LTnewLM_220008100 LTnewLM_22 AUGUSTUS mRNA 127064 128749 1 - . ID=LTnewLM_220008100.1;Parent=LTnewLM_220008100 LTnewLM_22 AUGUSTUS CDS 127064 128749 1 - 0 ID=LTnewLM_220008100.1:CDS:1;Parent=LTnewLM_220008100.1 ### LTnewLM_22 . polypeptide 127064 128749 . - . ID=LTnewLM_220008100.1:pep;Derives_from=LTnewLM_220008100.1;orthologous_to=LmjF.22.0300_mRNA;ortholog_cluster=OG0002276;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 130318 132348 1 - . ID=LTnewLM_220008200 LTnewLM_22 AUGUSTUS mRNA 130318 132348 1 - . ID=LTnewLM_220008200.1;Parent=LTnewLM_220008200 LTnewLM_22 AUGUSTUS CDS 130318 132348 1 - 0 ID=LTnewLM_220008200.1:CDS:1;Parent=LTnewLM_220008200.1 ### LTnewLM_22 . polypeptide 130318 132348 . - . ID=LTnewLM_220008200.1:pep;Derives_from=LTnewLM_220008200.1;orthologous_to=LmjF.22.0310_mRNA;ortholog_cluster=OG0002277;product=term%3DCholine/Carnitine o-acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00755;Ontology_term=GO:0016746 LTnewLM_22 Pfam protein_match 130489 132159 . - . Parent=LTnewLM_220008200.1:pep;Name=PF00755;signature_desc=Choline/Carnitine o-acyltransferase;Ontology_term=GO:0016746 ### LTnewLM_22 Liftoff gene 133673 134746 . - . ID=LTnewLM_220008300;coverage=1.0;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0320_0 LTnewLM_22 Liftoff mRNA 133673 134746 . - . ID=LTnewLM_220008300.1;Parent=LTnewLM_220008300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 133673 134746 . - 0 ID=LTnewLM_220008300.1:CDS:1;Parent=LTnewLM_220008300.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 133673 134746 . - . ID=LTnewLM_220008300.1:pep;Derives_from=LTnewLM_220008300.1;orthologous_to=LmjF.22.0320_mRNA;ortholog_cluster=OG0002278;product=term%3DSEP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08059 LTnewLM_22 Pfam protein_match 134051 134266 . - . Parent=LTnewLM_220008300.1:pep;Name=PF08059;signature_desc=SEP domain ### LTnewLM_22 AUGUSTUS gene 136594 139863 1 - . ID=LTnewLM_220008400 LTnewLM_22 AUGUSTUS mRNA 136594 139863 1 - . ID=LTnewLM_220008400.1;Parent=LTnewLM_220008400 LTnewLM_22 AUGUSTUS CDS 136594 139863 1 - 0 ID=LTnewLM_220008400.1:CDS:1;Parent=LTnewLM_220008400.1 ### LTnewLM_22 . polypeptide 136594 139863 . - . ID=LTnewLM_220008400.1:pep;Derives_from=LTnewLM_220008400.1;orthologous_to=LmjF.22.0330_mRNA;ortholog_cluster=OG0002279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 146183 146488 0.96 - . ID=LTnewLM_220008500 LTnewLM_22 AUGUSTUS mRNA 146183 146488 0.96 - . ID=LTnewLM_220008500.1;Parent=LTnewLM_220008500 LTnewLM_22 AUGUSTUS CDS 146183 146488 0.96 - 0 ID=LTnewLM_220008500.1:CDS:1;Parent=LTnewLM_220008500.1 ### LTnewLM_22 . polypeptide 146183 146488 . - . ID=LTnewLM_220008500.1:pep;Derives_from=LTnewLM_220008500.1;product=term%3DTetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02882;Ontology_term=GO:0004488,GO:0055114,GO:0009396,GO:0003824 LTnewLM_22 Pfam protein_match 146312 146443 . - . Parent=LTnewLM_220008500.1:pep;Name=PF02882;signature_desc=Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain;Ontology_term=GO:0003824,GO:0004488,GO:0009396,GO:0055114 ### LTnewLM_22 AUGUSTUS gene 146518 147564 0.96 - . ID=LTnewLM_220008600 LTnewLM_22 AUGUSTUS mRNA 146518 147564 0.96 - . ID=LTnewLM_220008600.1;Parent=LTnewLM_220008600 LTnewLM_22 AUGUSTUS CDS 146518 147564 0.96 - 0 ID=LTnewLM_220008600.1:CDS:1;Parent=LTnewLM_220008600.1 ### LTnewLM_22 . polypeptide 146518 147564 . - . ID=LTnewLM_220008600.1:pep;Derives_from=LTnewLM_220008600.1;orthologous_to=LTnewLM_260008300.1,LmjF.26.0320_mRNA;ortholog_cluster=OG0000382;product=term%3DTetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00763;Ontology_term=GO:0004488,GO:0055114,GO:0009396,GO:0003824 LTnewLM_22 Pfam protein_match 147130 147459 . - . Parent=LTnewLM_220008600.1:pep;Name=PF00763;signature_desc=Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain;Ontology_term=GO:0003824,GO:0004488,GO:0009396,GO:0055114 ### LTnewLM_22 AUGUSTUS gene 148278 149030 1 - . ID=LTnewLM_220008700 LTnewLM_22 AUGUSTUS mRNA 148278 149030 1 - . ID=LTnewLM_220008700.1;Parent=LTnewLM_220008700 LTnewLM_22 AUGUSTUS CDS 148278 149030 1 - 0 ID=LTnewLM_220008700.1:CDS:1;Parent=LTnewLM_220008700.1 ### LTnewLM_22 . polypeptide 148278 149030 . - . ID=LTnewLM_220008700.1:pep;Derives_from=LTnewLM_220008700.1;orthologous_to=LmjF.22.0350_mRNA;ortholog_cluster=OG0002280;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 150143 151174 1 - . ID=LTnewLM_220008800 LTnewLM_22 AUGUSTUS mRNA 150143 151174 1 - . ID=LTnewLM_220008800.1;Parent=LTnewLM_220008800 LTnewLM_22 AUGUSTUS CDS 150143 151174 1 - 0 ID=LTnewLM_220008800.1:CDS:1;Parent=LTnewLM_220008800.1 ### LTnewLM_22 . polypeptide 150143 151174 . - . ID=LTnewLM_220008800.1:pep;Derives_from=LTnewLM_220008800.1;orthologous_to=LmjF.22.0360_mRNA;ortholog_cluster=OG0002281;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 151921 152745 1 - . ID=LTnewLM_220008900 LTnewLM_22 AUGUSTUS mRNA 151921 152745 1 - . ID=LTnewLM_220008900.1;Parent=LTnewLM_220008900 LTnewLM_22 AUGUSTUS CDS 151921 152745 1 - 0 ID=LTnewLM_220008900.1:CDS:1;Parent=LTnewLM_220008900.1 ### LTnewLM_22 . polypeptide 151921 152745 . - . ID=LTnewLM_220008900.1:pep;Derives_from=LTnewLM_220008900.1;orthologous_to=LmjF.22.0370_mRNA;ortholog_cluster=OG0002282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 153578 157405 1 - . ID=LTnewLM_220009000 LTnewLM_22 AUGUSTUS mRNA 153578 157405 1 - . ID=LTnewLM_220009000.1;Parent=LTnewLM_220009000 LTnewLM_22 AUGUSTUS CDS 153578 157405 1 - 0 ID=LTnewLM_220009000.1:CDS:1;Parent=LTnewLM_220009000.1 ### LTnewLM_22 . polypeptide 153578 157405 . - . ID=LTnewLM_220009000.1:pep;Derives_from=LTnewLM_220009000.1;orthologous_to=LmjF.22.0380_mRNA;ortholog_cluster=OG0002283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 158404 159756 1 - . ID=LTnewLM_220009100 LTnewLM_22 AUGUSTUS mRNA 158404 159756 1 - . ID=LTnewLM_220009100.1;Parent=LTnewLM_220009100 LTnewLM_22 AUGUSTUS CDS 158404 159756 1 - 0 ID=LTnewLM_220009100.1:CDS:1;Parent=LTnewLM_220009100.1 ### LTnewLM_22 . polypeptide 158404 159756 . - . ID=LTnewLM_220009100.1:pep;Derives_from=LTnewLM_220009100.1;orthologous_to=LmjF.22.0390_mRNA;ortholog_cluster=OG0002284;product=term%3DDNA primase small subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01896;Ontology_term=GO:0003896,GO:0006269 LTnewLM_22 Pfam protein_match 158554 159264 . - . Parent=LTnewLM_220009100.1:pep;Name=PF01896;signature_desc=DNA primase small subunit;Ontology_term=GO:0003896,GO:0006269 ### LTnewLM_22 AUGUSTUS gene 161406 163589 1 - . ID=LTnewLM_220009200 LTnewLM_22 AUGUSTUS mRNA 161406 163589 1 - . ID=LTnewLM_220009200.1;Parent=LTnewLM_220009200 LTnewLM_22 AUGUSTUS CDS 161406 163589 1 - 0 ID=LTnewLM_220009200.1:CDS:1;Parent=LTnewLM_220009200.1 ### LTnewLM_22 . polypeptide 161406 163589 . - . ID=LTnewLM_220009200.1:pep;Derives_from=LTnewLM_220009200.1;orthologous_to=LmjF.22.0400_mRNA;ortholog_cluster=OG0002285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 167175 170768 1 - . ID=LTnewLM_220009300 LTnewLM_22 AUGUSTUS mRNA 167175 170768 1 - . ID=LTnewLM_220009300.1;Parent=LTnewLM_220009300 LTnewLM_22 AUGUSTUS CDS 167175 170768 1 - 0 ID=LTnewLM_220009300.1:CDS:1;Parent=LTnewLM_220009300.1 ### LTnewLM_22 . polypeptide 167175 170768 . - . ID=LTnewLM_220009300.1:pep;Derives_from=LTnewLM_220009300.1;orthologous_to=LmjF.22.0410_mRNA;ortholog_cluster=OG0002286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 172598 172885 0.99 - . ID=LTnewLM_220009400 LTnewLM_22 AUGUSTUS mRNA 172598 172885 0.99 - . ID=LTnewLM_220009400.1;Parent=LTnewLM_220009400 LTnewLM_22 AUGUSTUS CDS 172598 172885 0.99 - 0 ID=LTnewLM_220009400.1:CDS:1;Parent=LTnewLM_220009400.1 ### LTnewLM_22 . polypeptide 172598 172885 . - . ID=LTnewLM_220009400.1:pep;Derives_from=LTnewLM_220009400.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 172914 177393 0.8 - . ID=LTnewLM_220009500 LTnewLM_22 AUGUSTUS mRNA 172914 177393 0.8 - . ID=LTnewLM_220009500.1;Parent=LTnewLM_220009500 LTnewLM_22 AUGUSTUS CDS 172914 176675 0.81 - 0 ID=LTnewLM_220009500.1:CDS:1;Parent=LTnewLM_220009500.1 LTnewLM_22 AUGUSTUS CDS 176746 177393 0.83 - 0 ID=LTnewLM_220009500.1:CDS:2;Parent=LTnewLM_220009500.1 ### LTnewLM_22 . polypeptide 172914 177393 . - . ID=LTnewLM_220009500.1:pep;Derives_from=LTnewLM_220009500.1;orthologous_to=LTnewLM_220009600.1,LTnewLM_220009700.1,LTnewLM_220009800.1;ortholog_cluster=OG0000161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 177528 179409 0.43 - . ID=LTnewLM_220009600 LTnewLM_22 AUGUSTUS mRNA 177528 179409 0.43 - . ID=LTnewLM_220009600.1;Parent=LTnewLM_220009600 LTnewLM_22 AUGUSTUS CDS 177528 178800 0.43 - 1 ID=LTnewLM_220009600.1:CDS:1;Parent=LTnewLM_220009600.1 LTnewLM_22 AUGUSTUS CDS 178847 179409 0.7 - 0 ID=LTnewLM_220009600.1:CDS:2;Parent=LTnewLM_220009600.1 ### LTnewLM_22 . polypeptide 177528 179409 . - . ID=LTnewLM_220009600.1:pep;Derives_from=LTnewLM_220009600.1;orthologous_to=LTnewLM_220009500.1,LTnewLM_220009700.1,LTnewLM_220009800.1;ortholog_cluster=OG0000161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 179544 180327 0.85 - . ID=LTnewLM_220009700 LTnewLM_22 AUGUSTUS mRNA 179544 180327 0.85 - . ID=LTnewLM_220009700.1;Parent=LTnewLM_220009700 LTnewLM_22 AUGUSTUS CDS 179544 179975 0.89 - 0 ID=LTnewLM_220009700.1:CDS:1;Parent=LTnewLM_220009700.1 LTnewLM_22 AUGUSTUS CDS 180046 180327 0.86 - 0 ID=LTnewLM_220009700.1:CDS:2;Parent=LTnewLM_220009700.1 ### LTnewLM_22 . polypeptide 179544 180327 . - . ID=LTnewLM_220009700.1:pep;Derives_from=LTnewLM_220009700.1;orthologous_to=LTnewLM_220009500.1,LTnewLM_220009600.1,LTnewLM_220009800.1;ortholog_cluster=OG0000161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 188660 192888 0.54 - . ID=LTnewLM_220009800 LTnewLM_22 AUGUSTUS mRNA 188660 192888 0.54 - . ID=LTnewLM_220009800.1;Parent=LTnewLM_220009800 LTnewLM_22 AUGUSTUS CDS 188660 189670 0.54 - 0 ID=LTnewLM_220009800.1:CDS:1;Parent=LTnewLM_220009800.1 LTnewLM_22 AUGUSTUS CDS 189718 192888 0.76 - 0 ID=LTnewLM_220009800.1:CDS:2;Parent=LTnewLM_220009800.1 ### LTnewLM_22 . polypeptide 188660 192888 . - . ID=LTnewLM_220009800.1:pep;Derives_from=LTnewLM_220009800.1;orthologous_to=LTnewLM_220009500.1,LTnewLM_220009600.1,LTnewLM_220009700.1;ortholog_cluster=OG0000161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 195029 195487 1 - . ID=LTnewLM_220009900 LTnewLM_22 AUGUSTUS mRNA 195029 195487 1 - . ID=LTnewLM_220009900.1;Parent=LTnewLM_220009900 LTnewLM_22 AUGUSTUS CDS 195029 195487 1 - 0 ID=LTnewLM_220009900.1:CDS:1;Parent=LTnewLM_220009900.1 ### LTnewLM_22 . polypeptide 195029 195487 . - . ID=LTnewLM_220009900.1:pep;Derives_from=LTnewLM_220009900.1;orthologous_to=LTnewLM_220010200.1,LmjF.22.0420_mRNA,LmjF.22.0460_mRNA;ortholog_cluster=OG0000162;product=term%3DRibosomal protein S19%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00203;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_22 Pfam protein_match 195086 195331 . - . Parent=LTnewLM_220009900.1:pep;Name=PF00203;signature_desc=Ribosomal protein S19;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 196492 200340 1 - . ID=LTnewLM_220010000 LTnewLM_22 AUGUSTUS mRNA 196492 200340 1 - . ID=LTnewLM_220010000.1;Parent=LTnewLM_220010000 LTnewLM_22 AUGUSTUS CDS 196492 200340 1 - 0 ID=LTnewLM_220010000.1:CDS:1;Parent=LTnewLM_220010000.1 ### LTnewLM_22 . polypeptide 196492 200340 . - . ID=LTnewLM_220010000.1:pep;Derives_from=LTnewLM_220010000.1;orthologous_to=LmjF.22.0440_mRNA;ortholog_cluster=OG0002287;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 201655 202524 1 - . ID=LTnewLM_220010100 LTnewLM_22 AUGUSTUS mRNA 201655 202524 1 - . ID=LTnewLM_220010100.1;Parent=LTnewLM_220010100 LTnewLM_22 AUGUSTUS CDS 201655 202524 1 - 0 ID=LTnewLM_220010100.1:CDS:1;Parent=LTnewLM_220010100.1 ### LTnewLM_22 . polypeptide 201655 202524 . - . ID=LTnewLM_220010100.1:pep;Derives_from=LTnewLM_220010100.1;orthologous_to=LmjF.22.0450_mRNA;ortholog_cluster=OG0002288;product=term%3DAcetyltransferase (GNAT) family/Acetyltransferase (GNAT) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583|Pfam:PF13508;Ontology_term=GO:0008080 LTnewLM_22 Pfam protein_match 201787 202020 . - . Parent=LTnewLM_220010100.1:pep;Name=PF13508;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_22 Pfam protein_match 201790 202047 . - . Parent=LTnewLM_220010100.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_22 AUGUSTUS gene 203298 203756 1 - . ID=LTnewLM_220010200 LTnewLM_22 AUGUSTUS mRNA 203298 203756 1 - . ID=LTnewLM_220010200.1;Parent=LTnewLM_220010200 LTnewLM_22 AUGUSTUS CDS 203298 203756 1 - 0 ID=LTnewLM_220010200.1:CDS:1;Parent=LTnewLM_220010200.1 ### LTnewLM_22 . polypeptide 203298 203756 . - . ID=LTnewLM_220010200.1:pep;Derives_from=LTnewLM_220010200.1;orthologous_to=LTnewLM_220009900.1,LmjF.22.0420_mRNA,LmjF.22.0460_mRNA;ortholog_cluster=OG0000162;product=term%3DRibosomal protein S19%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00203;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_22 Pfam protein_match 203355 203600 . - . Parent=LTnewLM_220010200.1:pep;Name=PF00203;signature_desc=Ribosomal protein S19;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 205223 206470 1 - . ID=LTnewLM_220010300 LTnewLM_22 AUGUSTUS mRNA 205223 206470 1 - . ID=LTnewLM_220010300.1;Parent=LTnewLM_220010300 LTnewLM_22 AUGUSTUS CDS 205223 206470 1 - 0 ID=LTnewLM_220010300.1:CDS:1;Parent=LTnewLM_220010300.1 ### LTnewLM_22 . polypeptide 205223 206470 . - . ID=LTnewLM_220010300.1:pep;Derives_from=LTnewLM_220010300.1;orthologous_to=LmjF.22.0470_mRNA;ortholog_cluster=OG0002289;product=term%3DPutative tRNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01588;Ontology_term=GO:0000049 LTnewLM_22 Pfam protein_match 205430 205702 . - . Parent=LTnewLM_220010300.1:pep;Name=PF01588;signature_desc=Putative tRNA binding domain;Ontology_term=GO:0000049 ### LTnewLM_22 AUGUSTUS gene 207383 209176 1 - . ID=LTnewLM_220010400 LTnewLM_22 AUGUSTUS mRNA 207383 209176 1 - . ID=LTnewLM_220010400.1;Parent=LTnewLM_220010400 LTnewLM_22 AUGUSTUS CDS 207383 209176 1 - 0 ID=LTnewLM_220010400.1:CDS:1;Parent=LTnewLM_220010400.1 ### LTnewLM_22 . polypeptide 207383 209176 . - . ID=LTnewLM_220010400.1:pep;Derives_from=LTnewLM_220010400.1;orthologous_to=LmjF.22.0480_mRNA;ortholog_cluster=OG0002290;product=term%3D50S ribosome-binding GTPase/Dynamin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926|Pfam:PF00350;Ontology_term=GO:0005525 LTnewLM_22 Pfam protein_match 208196 208714 . - . Parent=LTnewLM_220010400.1:pep;Name=PF00350;signature_desc=Dynamin family LTnewLM_22 Pfam protein_match 208199 208714 . - . Parent=LTnewLM_220010400.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_22 AUGUSTUS gene 212420 214606 1 - . ID=LTnewLM_220010500 LTnewLM_22 AUGUSTUS mRNA 212420 214606 1 - . ID=LTnewLM_220010500.1;Parent=LTnewLM_220010500 LTnewLM_22 AUGUSTUS CDS 212420 214606 1 - 0 ID=LTnewLM_220010500.1:CDS:1;Parent=LTnewLM_220010500.1 ### LTnewLM_22 . polypeptide 212420 214606 . - . ID=LTnewLM_220010500.1:pep;Derives_from=LTnewLM_220010500.1;orthologous_to=LmjF.22.0490_mRNA;ortholog_cluster=OG0002291;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_22 Pfam protein_match 212693 213637 . - . Parent=LTnewLM_220010500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_22 Pfam protein_match 213302 213655 . - . Parent=LTnewLM_220010500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_22 AUGUSTUS gene 216738 218294 1 - . ID=LTnewLM_220010600 LTnewLM_22 AUGUSTUS mRNA 216738 218294 1 - . ID=LTnewLM_220010600.1;Parent=LTnewLM_220010600 LTnewLM_22 AUGUSTUS CDS 216738 218294 1 - 0 ID=LTnewLM_220010600.1:CDS:1;Parent=LTnewLM_220010600.1 ### LTnewLM_22 . polypeptide 216738 218294 . - . ID=LTnewLM_220010600.1:pep;Derives_from=LTnewLM_220010600.1;orthologous_to=LmjF.22.0500_mRNA;ortholog_cluster=OG0002292;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 219025 221004 1 - . ID=LTnewLM_220010700 LTnewLM_22 AUGUSTUS mRNA 219025 221004 1 - . ID=LTnewLM_220010700.1;Parent=LTnewLM_220010700 LTnewLM_22 AUGUSTUS CDS 219025 221004 1 - 0 ID=LTnewLM_220010700.1:CDS:1;Parent=LTnewLM_220010700.1 ### LTnewLM_22 . polypeptide 219025 221004 . - . ID=LTnewLM_220010700.1:pep;Derives_from=LTnewLM_220010700.1;orthologous_to=LmjF.22.0510_mRNA;ortholog_cluster=OG0002293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 221931 225335 1 - . ID=LTnewLM_220010800 LTnewLM_22 AUGUSTUS mRNA 221931 225335 1 - . ID=LTnewLM_220010800.1;Parent=LTnewLM_220010800 LTnewLM_22 AUGUSTUS CDS 221931 225335 1 - 0 ID=LTnewLM_220010800.1:CDS:1;Parent=LTnewLM_220010800.1 ### LTnewLM_22 . polypeptide 221931 225335 . - . ID=LTnewLM_220010800.1:pep;Derives_from=LTnewLM_220010800.1;orthologous_to=LmjF.22.0520_mRNA;ortholog_cluster=OG0002294;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_22 Pfam protein_match 222327 223061 . - . Parent=LTnewLM_220010800.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_22 AUGUSTUS gene 226583 227902 1 - . ID=LTnewLM_220010900 LTnewLM_22 AUGUSTUS mRNA 226583 227902 1 - . ID=LTnewLM_220010900.1;Parent=LTnewLM_220010900 LTnewLM_22 AUGUSTUS CDS 226583 227902 1 - 0 ID=LTnewLM_220010900.1:CDS:1;Parent=LTnewLM_220010900.1 ### LTnewLM_22 . polypeptide 226583 227902 . - . ID=LTnewLM_220010900.1:pep;Derives_from=LTnewLM_220010900.1;orthologous_to=LmjF.22.0530_mRNA;ortholog_cluster=OG0002295;product=term%3DFHA domain/Inner membrane component of T3SS%2C cytoplasmic domain/PPIC-type PPIASE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498|Pfam:PF16697|Pfam:PF13616|Pfam:PF00639;Ontology_term=GO:0016853,GO:0005515 LTnewLM_22 Pfam protein_match 226595 226774 . - . Parent=LTnewLM_220010900.1:pep;Name=PF00639;signature_desc=PPIC-type PPIASE domain;Ontology_term=GO:0016853 LTnewLM_22 Pfam protein_match 226604 226777 . - . Parent=LTnewLM_220010900.1:pep;Name=PF13616;signature_desc=PPIC-type PPIASE domain LTnewLM_22 Pfam protein_match 227414 227620 . - . Parent=LTnewLM_220010900.1:pep;Name=PF16697;signature_desc=Inner membrane component of T3SS%2C cytoplasmic domain LTnewLM_22 Pfam protein_match 227417 227620 . - . Parent=LTnewLM_220010900.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 ### LTnewLM_22 AUGUSTUS gene 228499 231174 1 - . ID=LTnewLM_220011000 LTnewLM_22 AUGUSTUS mRNA 228499 231174 1 - . ID=LTnewLM_220011000.1;Parent=LTnewLM_220011000 LTnewLM_22 AUGUSTUS CDS 228499 231174 1 - 0 ID=LTnewLM_220011000.1:CDS:1;Parent=LTnewLM_220011000.1 ### LTnewLM_22 . polypeptide 228499 231174 . - . ID=LTnewLM_220011000.1:pep;Derives_from=LTnewLM_220011000.1;orthologous_to=LmjF.22.0540_mRNA;ortholog_cluster=OG0002296;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 232066 234735 1 - . ID=LTnewLM_220011100 LTnewLM_22 AUGUSTUS mRNA 232066 234735 1 - . ID=LTnewLM_220011100.1;Parent=LTnewLM_220011100 LTnewLM_22 AUGUSTUS CDS 232066 234735 1 - 0 ID=LTnewLM_220011100.1:CDS:1;Parent=LTnewLM_220011100.1 ### LTnewLM_22 . polypeptide 232066 234735 . - . ID=LTnewLM_220011100.1:pep;Derives_from=LTnewLM_220011100.1;orthologous_to=LmjF.22.0560_mRNA;ortholog_cluster=OG0002297;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_22 Pfam protein_match 233443 233796 . - . Parent=LTnewLM_220011100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_22 Pfam protein_match 233977 234636 . - . Parent=LTnewLM_220011100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_22 Pfam protein_match 234289 234636 . - . Parent=LTnewLM_220011100.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_22 AUGUSTUS gene 236611 237924 1 - . ID=LTnewLM_220011200 LTnewLM_22 AUGUSTUS mRNA 236611 237924 1 - . ID=LTnewLM_220011200.1;Parent=LTnewLM_220011200 LTnewLM_22 AUGUSTUS CDS 236611 237924 1 - 0 ID=LTnewLM_220011200.1:CDS:1;Parent=LTnewLM_220011200.1 ### LTnewLM_22 . polypeptide 236611 237924 . - . ID=LTnewLM_220011200.1:pep;Derives_from=LTnewLM_220011200.1;orthologous_to=LmjF.22.0570_mRNA;ortholog_cluster=OG0002298;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_22 Pfam protein_match 236686 236814 . - . Parent=LTnewLM_220011200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_22 Pfam protein_match 236884 237273 . - . Parent=LTnewLM_220011200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_22 Pfam protein_match 237073 237276 . - . Parent=LTnewLM_220011200.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_22 AUGUSTUS gene 240288 240839 1 - . ID=LTnewLM_220011300 LTnewLM_22 AUGUSTUS mRNA 240288 240839 1 - . ID=LTnewLM_220011300.1;Parent=LTnewLM_220011300 LTnewLM_22 AUGUSTUS CDS 240288 240839 1 - 0 ID=LTnewLM_220011300.1:CDS:1;Parent=LTnewLM_220011300.1 ### LTnewLM_22 . polypeptide 240288 240839 . - . ID=LTnewLM_220011300.1:pep;Derives_from=LTnewLM_220011300.1;orthologous_to=LmjF.22.0580_mRNA;ortholog_cluster=OG0002299;product=term%3DRer1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03248;Ontology_term=GO:0016021 LTnewLM_22 Pfam protein_match 240312 240788 . - . Parent=LTnewLM_220011300.1:pep;Name=PF03248;signature_desc=Rer1 family;Ontology_term=GO:0016021 ### LTnewLM_22 AUGUSTUS gene 241863 243341 1 - . ID=LTnewLM_220011400 LTnewLM_22 AUGUSTUS mRNA 241863 243341 1 - . ID=LTnewLM_220011400.1;Parent=LTnewLM_220011400 LTnewLM_22 AUGUSTUS CDS 241863 243341 1 - 0 ID=LTnewLM_220011400.1:CDS:1;Parent=LTnewLM_220011400.1 ### LTnewLM_22 . polypeptide 241863 243341 . - . ID=LTnewLM_220011400.1:pep;Derives_from=LTnewLM_220011400.1;orthologous_to=LmjF.22.0590_mRNA;ortholog_cluster=OG0002300;product=term%3DtRNA-methyltransferase O%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01980 LTnewLM_22 Pfam protein_match 241983 242192 . - . Parent=LTnewLM_220011400.1:pep;Name=PF01980;signature_desc=tRNA-methyltransferase O ### LTnewLM_22 AUGUSTUS gene 244008 245477 1 - . ID=LTnewLM_220011500 LTnewLM_22 AUGUSTUS mRNA 244008 245477 1 - . ID=LTnewLM_220011500.1;Parent=LTnewLM_220011500 LTnewLM_22 AUGUSTUS CDS 244008 245477 1 - 0 ID=LTnewLM_220011500.1:CDS:1;Parent=LTnewLM_220011500.1 ### LTnewLM_22 . polypeptide 244008 245477 . - . ID=LTnewLM_220011500.1:pep;Derives_from=LTnewLM_220011500.1;orthologous_to=LmjF.22.0600.1_mRNA,LmjF.22.0600.2_mRNA;ortholog_cluster=OG0000383;product=term%3DAcetyltransferase (GNAT) domain/Acetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13302|Pfam:PF00583;Ontology_term=GO:0008080 LTnewLM_22 Pfam protein_match 244350 244532 . - . Parent=LTnewLM_220011500.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 LTnewLM_22 Pfam protein_match 244365 244709 . - . Parent=LTnewLM_220011500.1:pep;Name=PF13302;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 ### LTnewLM_22 AUGUSTUS gene 247960 248742 1 - . ID=LTnewLM_220011600 LTnewLM_22 AUGUSTUS mRNA 247960 248742 1 - . ID=LTnewLM_220011600.1;Parent=LTnewLM_220011600 LTnewLM_22 AUGUSTUS CDS 247960 248742 1 - 0 ID=LTnewLM_220011600.1:CDS:1;Parent=LTnewLM_220011600.1 ### LTnewLM_22 . polypeptide 247960 248742 . - . ID=LTnewLM_220011600.1:pep;Derives_from=LTnewLM_220011600.1;orthologous_to=LmjF.22.0610_mRNA;ortholog_cluster=OG0002301;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_22 Pfam protein_match 248044 248463 . - . Parent=LTnewLM_220011600.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_22 AUGUSTUS gene 250845 252179 1 - . ID=LTnewLM_220011700 LTnewLM_22 AUGUSTUS mRNA 250845 252179 1 - . ID=LTnewLM_220011700.1;Parent=LTnewLM_220011700 LTnewLM_22 AUGUSTUS CDS 250845 252179 1 - 0 ID=LTnewLM_220011700.1:CDS:1;Parent=LTnewLM_220011700.1 ### LTnewLM_22 . polypeptide 250845 252179 . - . ID=LTnewLM_220011700.1:pep;Derives_from=LTnewLM_220011700.1;orthologous_to=LmjF.22.0620_mRNA;ortholog_cluster=OG0002302;product=term%3DProteasomal ATPase OB C-terminal domain/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16450|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0005524 LTnewLM_22 Pfam protein_match 250908 251033 . - . Parent=LTnewLM_220011700.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_22 Pfam protein_match 251103 251498 . - . Parent=LTnewLM_220011700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_22 Pfam protein_match 251673 251900 . - . Parent=LTnewLM_220011700.1:pep;Name=PF16450;signature_desc=Proteasomal ATPase OB C-terminal domain ### LTnewLM_22 AUGUSTUS gene 254278 257715 1 - . ID=LTnewLM_220011800 LTnewLM_22 AUGUSTUS mRNA 254278 257715 1 - . ID=LTnewLM_220011800.1;Parent=LTnewLM_220011800 LTnewLM_22 AUGUSTUS CDS 254278 257715 1 - 0 ID=LTnewLM_220011800.1:CDS:1;Parent=LTnewLM_220011800.1 ### LTnewLM_22 . polypeptide 254278 257715 . - . ID=LTnewLM_220011800.1:pep;Derives_from=LTnewLM_220011800.1;orthologous_to=LmjF.22.0630_mRNA;ortholog_cluster=OG0002303;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 262842 268199 1 - . ID=LTnewLM_220011900 LTnewLM_22 AUGUSTUS mRNA 262842 268199 1 - . ID=LTnewLM_220011900.1;Parent=LTnewLM_220011900 LTnewLM_22 AUGUSTUS CDS 262842 268199 1 - 0 ID=LTnewLM_220011900.1:CDS:1;Parent=LTnewLM_220011900.1 ### LTnewLM_22 . polypeptide 262842 268199 . - . ID=LTnewLM_220011900.1:pep;Derives_from=LTnewLM_220011900.1;orthologous_to=LmjF.22.0640_mRNA;ortholog_cluster=OG0002304;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 269734 271275 1 - . ID=LTnewLM_220012000 LTnewLM_22 AUGUSTUS mRNA 269734 271275 1 - . ID=LTnewLM_220012000.1;Parent=LTnewLM_220012000 LTnewLM_22 AUGUSTUS CDS 269734 271275 1 - 0 ID=LTnewLM_220012000.1:CDS:1;Parent=LTnewLM_220012000.1 ### LTnewLM_22 . polypeptide 269734 271275 . - . ID=LTnewLM_220012000.1:pep;Derives_from=LTnewLM_220012000.1;orthologous_to=LmjF.22.0650_mRNA;ortholog_cluster=OG0002305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 Liftoff gene 272862 276554 . - . ID=LTnewLM_220012100;coverage=0.995;sequence_ID=0.927;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.22.0660_0 LTnewLM_22 Liftoff mRNA 272862 276554 . - . ID=LTnewLM_220012100.1;Parent=LTnewLM_220012100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 272862 276554 . - 0 ID=LTnewLM_220012100.1:CDS:1;Parent=LTnewLM_220012100.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 272862 276554 . - . ID=LTnewLM_220012100.1:pep;Derives_from=LTnewLM_220012100.1;orthologous_to=LmjF.22.0660_mRNA;ortholog_cluster=OG0002306;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 279008 279481 1 - . ID=LTnewLM_220012200 LTnewLM_22 AUGUSTUS mRNA 279008 279481 1 - . ID=LTnewLM_220012200.1;Parent=LTnewLM_220012200 LTnewLM_22 AUGUSTUS CDS 279008 279481 1 - 0 ID=LTnewLM_220012200.1:CDS:1;Parent=LTnewLM_220012200.1 ### LTnewLM_22 . polypeptide 279008 279481 . - . ID=LTnewLM_220012200.1:pep;Derives_from=LTnewLM_220012200.1;orthologous_to=LmjF.22.0670_mRNA;ortholog_cluster=OG0002307;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02996 LTnewLM_22 Pfam protein_match 279053 279340 . - . Parent=LTnewLM_220012200.1:pep;Name=PF02996;signature_desc=Prefoldin subunit ### LTnewLM_22 AUGUSTUS gene 280350 280649 1 - . ID=LTnewLM_220012300 LTnewLM_22 AUGUSTUS mRNA 280350 280649 1 - . ID=LTnewLM_220012300.1;Parent=LTnewLM_220012300 LTnewLM_22 AUGUSTUS CDS 280350 280649 1 - 0 ID=LTnewLM_220012300.1:CDS:1;Parent=LTnewLM_220012300.1 ### LTnewLM_22 . polypeptide 280350 280649 . - . ID=LTnewLM_220012300.1:pep;Derives_from=LTnewLM_220012300.1;orthologous_to=LmjF.22.0680_mRNA;ortholog_cluster=OG0002308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 282355 284205 1 - . ID=LTnewLM_220012400 LTnewLM_22 AUGUSTUS mRNA 282355 284205 1 - . ID=LTnewLM_220012400.1;Parent=LTnewLM_220012400 LTnewLM_22 AUGUSTUS CDS 282355 284205 1 - 0 ID=LTnewLM_220012400.1:CDS:1;Parent=LTnewLM_220012400.1 ### LTnewLM_22 . polypeptide 282355 284205 . - . ID=LTnewLM_220012400.1:pep;Derives_from=LTnewLM_220012400.1;orthologous_to=LTnewLM_220014200.1,LmjF.22.0690_mRNA,LmjF.22.0850_mRNA;ortholog_cluster=OG0000163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 289068 291380 0.5 - . ID=LTnewLM_220012500 LTnewLM_22 AUGUSTUS mRNA 289068 291380 0.5 - . ID=LTnewLM_220012500.1;Parent=LTnewLM_220012500 LTnewLM_22 AUGUSTUS CDS 289068 290785 0.59 - 2 ID=LTnewLM_220012500.1:CDS:1;Parent=LTnewLM_220012500.1 LTnewLM_22 AUGUSTUS CDS 291068 291380 0.5 - 0 ID=LTnewLM_220012500.1:CDS:2;Parent=LTnewLM_220012500.1 ### LTnewLM_22 . polypeptide 289068 291380 . - . ID=LTnewLM_220012500.1:pep;Derives_from=LTnewLM_220012500.1;product=term%3Dhypothetical protein ### LTnewLM_22 . pseudogene 292191 297009 . - . ID=LTnewLM_220012600:pseudogene;coverage=0.993;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0840_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 292191 297009 . - . ID=LTnewLM_220012600.1;Parent=LTnewLM_220012600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 292191 297009 . - . ID=LTnewLM_220012600.1:pseudogenic_exon:1;Parent=LTnewLM_220012600.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 292191 297009 . - . ID=LTnewLM_220012600.1:pep;Derives_from=LTnewLM_220012600.1;orthologous_to=LTnewLM_220014100.1,LTnewLM_220014100.2,LmjF.22.0700_mRNA,LmjF.22.0840_mRNA;ortholog_cluster=OG0000087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 298557 299465 1 - . ID=LTnewLM_220012700 LTnewLM_22 AUGUSTUS mRNA 298557 299465 1 - . ID=LTnewLM_220012700.1;Parent=LTnewLM_220012700 LTnewLM_22 AUGUSTUS CDS 298557 299465 1 - 0 ID=LTnewLM_220012700.1:CDS:1;Parent=LTnewLM_220012700.1 ### LTnewLM_22 . polypeptide 298557 299465 . - . ID=LTnewLM_220012700.1:pep;Derives_from=LTnewLM_220012700.1;orthologous_to=LTnewLM_220014000.1,LmjF.22.0710_mRNA,LmjF.22.0830_mRNA;ortholog_cluster=OG0000164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 300170 303676 1 - . ID=LTnewLM_220012800 LTnewLM_22 AUGUSTUS mRNA 300170 303676 1 - . ID=LTnewLM_220012800.1;Parent=LTnewLM_220012800 LTnewLM_22 AUGUSTUS CDS 300170 303676 1 - 0 ID=LTnewLM_220012800.1:CDS:1;Parent=LTnewLM_220012800.1 ### LTnewLM_22 . polypeptide 300170 303676 . - . ID=LTnewLM_220012800.1:pep;Derives_from=LTnewLM_220012800.1;orthologous_to=LTnewLM_220013900.1,LmjF.22.0720_mRNA,LmjF.22.0820_mRNA;ortholog_cluster=OG0000165;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_22 Pfam protein_match 302024 302446 . - . Parent=LTnewLM_220012800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_22 AUGUSTUS gene 305781 307100 1 - . ID=LTnewLM_220012900 LTnewLM_22 AUGUSTUS mRNA 305781 307100 1 - . ID=LTnewLM_220012900.1;Parent=LTnewLM_220012900 LTnewLM_22 AUGUSTUS CDS 305781 307100 1 - 0 ID=LTnewLM_220012900.1:CDS:1;Parent=LTnewLM_220012900.1 ### LTnewLM_22 . polypeptide 305781 307100 . - . ID=LTnewLM_220012900.1:pep;Derives_from=LTnewLM_220012900.1;orthologous_to=LmjF.22.0730_mRNA;ortholog_cluster=OG0002309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 316054 317823 1 - . ID=LTnewLM_220013000 LTnewLM_22 AUGUSTUS mRNA 316054 317823 1 - . ID=LTnewLM_220013000.1;Parent=LTnewLM_220013000 LTnewLM_22 AUGUSTUS CDS 316054 317823 1 - 0 ID=LTnewLM_220013000.1:CDS:1;Parent=LTnewLM_220013000.1 ### LTnewLM_22 . polypeptide 316054 317823 . - . ID=LTnewLM_220013000.1:pep;Derives_from=LTnewLM_220013000.1;orthologous_to=LmjF.22.0740_mRNA;ortholog_cluster=OG0002310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 322646 322972 0.84 - . ID=LTnewLM_220013100 LTnewLM_22 AUGUSTUS mRNA 322646 322972 0.84 - . ID=LTnewLM_220013100.1;Parent=LTnewLM_220013100 LTnewLM_22 AUGUSTUS CDS 322646 322972 0.84 - 0 ID=LTnewLM_220013100.1:CDS:1;Parent=LTnewLM_220013100.1 ### LTnewLM_22 . polypeptide 322646 322972 . - . ID=LTnewLM_220013100.1:pep;Derives_from=LTnewLM_220013100.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 325904 329347 1 - . ID=LTnewLM_220013200 LTnewLM_22 AUGUSTUS mRNA 325904 329347 1 - . ID=LTnewLM_220013200.1;Parent=LTnewLM_220013200 LTnewLM_22 AUGUSTUS CDS 325904 329347 1 - 0 ID=LTnewLM_220013200.1:CDS:1;Parent=LTnewLM_220013200.1 ### LTnewLM_22 . polypeptide 325904 329347 . - . ID=LTnewLM_220013200.1:pep;Derives_from=LTnewLM_220013200.1;orthologous_to=LmjF.22.0750_mRNA;ortholog_cluster=OG0002311;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 336050 336412 1 - . ID=LTnewLM_220013300 LTnewLM_22 AUGUSTUS mRNA 336050 336412 1 - . ID=LTnewLM_220013300.1;Parent=LTnewLM_220013300 LTnewLM_22 AUGUSTUS CDS 336050 336412 1 - 0 ID=LTnewLM_220013300.1:CDS:1;Parent=LTnewLM_220013300.1 ### LTnewLM_22 . polypeptide 336050 336412 . - . ID=LTnewLM_220013300.1:pep;Derives_from=LTnewLM_220013300.1;orthologous_to=LmjF.22.0760_mRNA;ortholog_cluster=OG0002312;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 338325 339194 1 - . ID=LTnewLM_220013400 LTnewLM_22 AUGUSTUS mRNA 338325 339194 1 - . ID=LTnewLM_220013400.1;Parent=LTnewLM_220013400 LTnewLM_22 AUGUSTUS CDS 338325 339194 1 - 0 ID=LTnewLM_220013400.1:CDS:1;Parent=LTnewLM_220013400.1 ### LTnewLM_22 . polypeptide 338325 339194 . - . ID=LTnewLM_220013400.1:pep;Derives_from=LTnewLM_220013400.1;orthologous_to=LmjF.22.0770_mRNA;ortholog_cluster=OG0002313;product=term%3DOxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_22 Pfam protein_match 338427 338753 . - . Parent=LTnewLM_220013400.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_22 Pfam protein_match 338790 339074 . - . Parent=LTnewLM_220013400.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_22 AUGUSTUS gene 340787 341656 1 - . ID=LTnewLM_220013500 LTnewLM_22 AUGUSTUS mRNA 340787 341656 1 - . ID=LTnewLM_220013500.1;Parent=LTnewLM_220013500 LTnewLM_22 AUGUSTUS CDS 340787 341656 1 - 0 ID=LTnewLM_220013500.1:CDS:1;Parent=LTnewLM_220013500.1 ### LTnewLM_22 . polypeptide 340787 341656 . - . ID=LTnewLM_220013500.1:pep;Derives_from=LTnewLM_220013500.1;orthologous_to=LmjF.22.0780_mRNA;ortholog_cluster=OG0002314;product=term%3DOxidoreductase FAD-binding domain/Ferric reductase NAD binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF08030|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_22 Pfam protein_match 340889 341212 . - . Parent=LTnewLM_220013500.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_22 Pfam protein_match 341057 341227 . - . Parent=LTnewLM_220013500.1:pep;Name=PF08030;signature_desc=Ferric reductase NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_22 Pfam protein_match 341249 341533 . - . Parent=LTnewLM_220013500.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_22 AUGUSTUS gene 342443 344437 1 - . ID=LTnewLM_220013600 LTnewLM_22 AUGUSTUS mRNA 342443 344437 1 - . ID=LTnewLM_220013600.1;Parent=LTnewLM_220013600 LTnewLM_22 AUGUSTUS CDS 342443 344437 1 - 0 ID=LTnewLM_220013600.1:CDS:1;Parent=LTnewLM_220013600.1 ### LTnewLM_22 . polypeptide 342443 344437 . - . ID=LTnewLM_220013600.1:pep;Derives_from=LTnewLM_220013600.1;orthologous_to=LmjF.22.0790_mRNA;ortholog_cluster=OG0002315;product=term%3DTranslation initiation factor SUI1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01253;Ontology_term=GO:0006413,GO:0003743 LTnewLM_22 Pfam protein_match 342476 342736 . - . Parent=LTnewLM_220013600.1:pep;Name=PF01253;signature_desc=Translation initiation factor SUI1;Ontology_term=GO:0003743,GO:0006413 ### LTnewLM_22 AUGUSTUS gene 346578 347222 1 + . ID=LTnewLM_220013700 LTnewLM_22 AUGUSTUS mRNA 346578 347222 1 + . ID=LTnewLM_220013700.1;Parent=LTnewLM_220013700 LTnewLM_22 AUGUSTUS CDS 346578 347222 1 + 0 ID=LTnewLM_220013700.1:CDS:1;Parent=LTnewLM_220013700.1 ### LTnewLM_22 . polypeptide 346578 347222 . + . ID=LTnewLM_220013700.1:pep;Derives_from=LTnewLM_220013700.1;orthologous_to=LmjF.22.0800_mRNA;ortholog_cluster=OG0002316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 Liftoff gene 347934 349052 . + . ID=LTnewLM_220013800;coverage=1.0;sequence_ID=0.966;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0810_0 LTnewLM_22 Liftoff mRNA 347934 349052 . + . ID=LTnewLM_220013800.1;Parent=LTnewLM_220013800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 347934 349052 . + 0 ID=LTnewLM_220013800.1:CDS:1;Parent=LTnewLM_220013800.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 347934 349052 . + . ID=LTnewLM_220013800.1:pep;Derives_from=LTnewLM_220013800.1;orthologous_to=LmjF.22.0810_mRNA;ortholog_cluster=OG0002317;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_22 Pfam protein_match 347955 348728 . + . Parent=LTnewLM_220013800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_22 Pfam protein_match 347961 348716 . + . Parent=LTnewLM_220013800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_22 . pseudogene 352362 355406 . + . ID=LTnewLM_220013900:pseudogene;coverage=0.866;sequence_ID=0.839;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0720_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 352362 355406 . + . ID=LTnewLM_220013900.1;Parent=LTnewLM_220013900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 352362 355406 . + . ID=LTnewLM_220013900.1:pseudogenic_exon:1;Parent=LTnewLM_220013900.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 352362 355406 . + . ID=LTnewLM_220013900.1:pep;Derives_from=LTnewLM_220013900.1;orthologous_to=LTnewLM_220012800.1,LmjF.22.0720_mRNA,LmjF.22.0820_mRNA;ortholog_cluster=OG0000165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 356128 357036 1 + . ID=LTnewLM_220014000 LTnewLM_22 AUGUSTUS mRNA 356128 357036 1 + . ID=LTnewLM_220014000.1;Parent=LTnewLM_220014000 LTnewLM_22 AUGUSTUS CDS 356128 357036 1 + 0 ID=LTnewLM_220014000.1:CDS:1;Parent=LTnewLM_220014000.1 ### LTnewLM_22 . polypeptide 356128 357036 . + . ID=LTnewLM_220014000.1:pep;Derives_from=LTnewLM_220014000.1;orthologous_to=LTnewLM_220012700.1,LmjF.22.0710_mRNA,LmjF.22.0830_mRNA;ortholog_cluster=OG0000164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 358592 363410 1.27 + . ID=LTnewLM_220014100 LTnewLM_22 AUGUSTUS mRNA 358592 363410 0.27 + . ID=LTnewLM_220014100.1;Parent=LTnewLM_220014100 LTnewLM_22 AUGUSTUS CDS 358592 361855 0.28 + 0 ID=LTnewLM_220014100.1:CDS:1;Parent=LTnewLM_220014100.1 LTnewLM_22 AUGUSTUS CDS 361929 363410 0.27 + 0 ID=LTnewLM_220014100.1:CDS:2;Parent=LTnewLM_220014100.1 LTnewLM_22 AUGUSTUS mRNA 361731 363410 1 + . ID=LTnewLM_220014100.2;Parent=LTnewLM_220014100 LTnewLM_22 AUGUSTUS CDS 361731 363410 1 + 0 ID=LTnewLM_220014100.2:CDS:1;Parent=LTnewLM_220014100.2 ### LTnewLM_22 . polypeptide 358592 363410 . + . ID=LTnewLM_220014100.1:pep;Derives_from=LTnewLM_220014100.1;orthologous_to=LTnewLM_220012600.1,LTnewLM_220014100.2,LmjF.22.0700_mRNA,LmjF.22.0840_mRNA;ortholog_cluster=OG0000087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . polypeptide 361731 363410 . + . ID=LTnewLM_220014100.2:pep;Derives_from=LTnewLM_220014100.2;orthologous_to=LTnewLM_220012600.1,LTnewLM_220014100.1,LmjF.22.0700_mRNA,LmjF.22.0840_mRNA;ortholog_cluster=OG0000087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 369891 371741 1 + . ID=LTnewLM_220014200 LTnewLM_22 AUGUSTUS mRNA 369891 371741 1 + . ID=LTnewLM_220014200.1;Parent=LTnewLM_220014200 LTnewLM_22 AUGUSTUS CDS 369891 371741 1 + 0 ID=LTnewLM_220014200.1:CDS:1;Parent=LTnewLM_220014200.1 ### LTnewLM_22 . polypeptide 369891 371741 . + . ID=LTnewLM_220014200.1:pep;Derives_from=LTnewLM_220014200.1;orthologous_to=LTnewLM_220012400.1,LmjF.22.0690_mRNA,LmjF.22.0850_mRNA;ortholog_cluster=OG0000163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 373013 377139 6.46e+03 + . ID=LTnewLM_220014300:pseudogene;has_internal_stop=false;has_frameshift=true;has_stop=true;Target=LmjF.24.0440:mRNA 2 1370;original_prot_length=1370 LTnewLM_22 . pseudogenic_transcript 373013 377139 . + . ID=LTnewLM_220014300.1;Parent=LTnewLM_220014300:pseudogene LTnewLM_22 . pseudogenic_exon 373013 376468 . + . ID=LTnewLM_220014300.1:pseudogenic_exon:1;Parent=LTnewLM_220014300.1 LTnewLM_22 . pseudogenic_exon 376471 377139 . + . ID=LTnewLM_220014300.1:pseudogenic_exon:2;Parent=LTnewLM_220014300.1 ### LTnewLM_22 . polypeptide 373013 377139 . + . ID=LTnewLM_220014300.1:pep;Derives_from=LTnewLM_220014300.1;orthologous_to=LTnewLM_240009400.1,LTnewLM_240009500.1,LmjF.22.0860_mRNA,LmjF.24.0440_mRNA,LmjF.24.0450_mRNA;ortholog_cluster=OG0000061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 379449 380288 1 + . ID=LTnewLM_220014400 LTnewLM_22 AUGUSTUS mRNA 379449 380288 1 + . ID=LTnewLM_220014400.1;Parent=LTnewLM_220014400 LTnewLM_22 AUGUSTUS CDS 379449 380288 1 + 0 ID=LTnewLM_220014400.1:CDS:1;Parent=LTnewLM_220014400.1 ### LTnewLM_22 . polypeptide 379449 380288 . + . ID=LTnewLM_220014400.1:pep;Derives_from=LTnewLM_220014400.1;orthologous_to=LmjF.22.0870_mRNA;ortholog_cluster=OG0002318;product=term%3DRibosomal protein L22p/L17e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00237;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_22 Pfam protein_match 379857 380150 . + . Parent=LTnewLM_220014400.1:pep;Name=PF00237;signature_desc=Ribosomal protein L22p/L17e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 381622 383739 1 + . ID=LTnewLM_220014500 LTnewLM_22 AUGUSTUS mRNA 381622 383739 1 + . ID=LTnewLM_220014500.1;Parent=LTnewLM_220014500 LTnewLM_22 AUGUSTUS CDS 381622 383739 1 + 0 ID=LTnewLM_220014500.1:CDS:1;Parent=LTnewLM_220014500.1 ### LTnewLM_22 . polypeptide 381622 383739 . + . ID=LTnewLM_220014500.1:pep;Derives_from=LTnewLM_220014500.1;orthologous_to=LmjF.22.0880_mRNA;ortholog_cluster=OG0002319;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 384750 385118 1 + . ID=LTnewLM_220014600 LTnewLM_22 AUGUSTUS mRNA 384750 385118 1 + . ID=LTnewLM_220014600.1;Parent=LTnewLM_220014600 LTnewLM_22 AUGUSTUS CDS 384750 385118 1 + 0 ID=LTnewLM_220014600.1:CDS:1;Parent=LTnewLM_220014600.1 ### LTnewLM_22 . polypeptide 384750 385118 . + . ID=LTnewLM_220014600.1:pep;Derives_from=LTnewLM_220014600.1;orthologous_to=LmjF.22.0890_mRNA;ortholog_cluster=OG0002320;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 387610 390402 1 + . ID=LTnewLM_220014700 LTnewLM_22 AUGUSTUS mRNA 387610 390402 1 + . ID=LTnewLM_220014700.1;Parent=LTnewLM_220014700 LTnewLM_22 AUGUSTUS CDS 387610 390402 1 + 0 ID=LTnewLM_220014700.1:CDS:1;Parent=LTnewLM_220014700.1 ### LTnewLM_22 . polypeptide 387610 390402 . + . ID=LTnewLM_220014700.1:pep;Derives_from=LTnewLM_220014700.1;orthologous_to=LmjF.22.0900_mRNA;ortholog_cluster=OG0002321;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 392361 394019 1 + . ID=LTnewLM_220014800 LTnewLM_22 AUGUSTUS mRNA 392361 394019 1 + . ID=LTnewLM_220014800.1;Parent=LTnewLM_220014800 LTnewLM_22 AUGUSTUS CDS 392361 394019 1 + 0 ID=LTnewLM_220014800.1:CDS:1;Parent=LTnewLM_220014800.1 ### LTnewLM_22 . polypeptide 392361 394019 . + . ID=LTnewLM_220014800.1:pep;Derives_from=LTnewLM_220014800.1;orthologous_to=LmjF.22.0910_mRNA;ortholog_cluster=OG0002322;product=term%3DPrp18 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02840;Ontology_term=GO:0005681,GO:0008380 LTnewLM_22 Pfam protein_match 393687 393947 . + . Parent=LTnewLM_220014800.1:pep;Name=PF02840;signature_desc=Prp18 domain;Ontology_term=GO:0008380,GO:0005681 ### LTnewLM_22 . pseudogene 396199 398957 . + . ID=LTnewLM_220014900:pseudogene;coverage=0.994;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.0920_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 396199 398957 . + . ID=LTnewLM_220014900.1;Parent=LTnewLM_220014900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 396199 398957 . + . ID=LTnewLM_220014900.1:pseudogenic_exon:1;Parent=LTnewLM_220014900.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 396199 398957 . + . ID=LTnewLM_220014900.1:pep;Derives_from=LTnewLM_220014900.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 400500 402650 1 + . ID=LTnewLM_220015000 LTnewLM_22 AUGUSTUS mRNA 400500 402650 1 + . ID=LTnewLM_220015000.1;Parent=LTnewLM_220015000 LTnewLM_22 AUGUSTUS CDS 400500 402650 1 + 0 ID=LTnewLM_220015000.1:CDS:1;Parent=LTnewLM_220015000.1 ### LTnewLM_22 . polypeptide 400500 402650 . + . ID=LTnewLM_220015000.1:pep;Derives_from=LTnewLM_220015000.1;orthologous_to=LmjF.22.0930_mRNA;ortholog_cluster=OG0002323;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_22 Pfam protein_match 401484 401786 . + . Parent=LTnewLM_220015000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_22 . polypeptide 404450 405173 . + . ID=LTnewLM_220015100.1:pep;Derives_from=LTnewLM_220015100.1;orthologous_to=LTnewLM_220015100.2,LmjF.22.0940_mRNA;ortholog_cluster=OG0000384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 404450 406646 1.14 + . ID=LTnewLM_220015100 LTnewLM_22 AUGUSTUS mRNA 404450 405173 0.39 + . ID=LTnewLM_220015100.1;Parent=LTnewLM_220015100 LTnewLM_22 AUGUSTUS CDS 404450 405039 0.4 + 0 ID=LTnewLM_220015100.1:CDS:1;Parent=LTnewLM_220015100.1 LTnewLM_22 AUGUSTUS CDS 405092 405173 0.39 + 1 ID=LTnewLM_220015100.1:CDS:2;Parent=LTnewLM_220015100.1 LTnewLM_22 AUGUSTUS mRNA 404450 406646 0.75 + . ID=LTnewLM_220015100.2;Parent=LTnewLM_220015100 LTnewLM_22 AUGUSTUS CDS 404450 405442 0.75 + 0 ID=LTnewLM_220015100.2:CDS:1;Parent=LTnewLM_220015100.2 LTnewLM_22 AUGUSTUS CDS 405516 406646 0.75 + 0 ID=LTnewLM_220015100.2:CDS:2;Parent=LTnewLM_220015100.2 ### LTnewLM_22 . polypeptide 404450 406646 . + . ID=LTnewLM_220015100.2:pep;Derives_from=LTnewLM_220015100.2;orthologous_to=LTnewLM_220015100.1,LmjF.22.0940_mRNA;ortholog_cluster=OG0000384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 410261 411337 1 + . ID=LTnewLM_220015200 LTnewLM_22 AUGUSTUS mRNA 410261 411337 1 + . ID=LTnewLM_220015200.1;Parent=LTnewLM_220015200 LTnewLM_22 AUGUSTUS CDS 410261 411337 1 + 0 ID=LTnewLM_220015200.1:CDS:1;Parent=LTnewLM_220015200.1 ### LTnewLM_22 . polypeptide 410261 411337 . + . ID=LTnewLM_220015200.1:pep;Derives_from=LTnewLM_220015200.1;orthologous_to=LmjF.22.0950_mRNA;ortholog_cluster=OG0002324;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_22 Pfam protein_match 410390 411193 . + . Parent=LTnewLM_220015200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_22 Pfam protein_match 410396 411178 . + . Parent=LTnewLM_220015200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_22 Pfam protein_match 410738 411145 . + . Parent=LTnewLM_220015200.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_22 AUGUSTUS gene 418461 422822 1 + . ID=LTnewLM_220015300 LTnewLM_22 AUGUSTUS mRNA 418461 422822 1 + . ID=LTnewLM_220015300.1;Parent=LTnewLM_220015300 LTnewLM_22 AUGUSTUS CDS 418461 422822 1 + 0 ID=LTnewLM_220015300.1:CDS:1;Parent=LTnewLM_220015300.1 ### LTnewLM_22 . polypeptide 418461 422822 . + . ID=LTnewLM_220015300.1:pep;Derives_from=LTnewLM_220015300.1;orthologous_to=LmjF.22.0960_mRNA;ortholog_cluster=OG0002325;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_22 Pfam protein_match 419016 420017 . + . Parent=LTnewLM_220015300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_22 Pfam protein_match 419061 419147 . + . Parent=LTnewLM_220015300.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_22 AUGUSTUS gene 425521 431403 1 + . ID=LTnewLM_220015400 LTnewLM_22 AUGUSTUS mRNA 425521 431403 1 + . ID=LTnewLM_220015400.1;Parent=LTnewLM_220015400 LTnewLM_22 AUGUSTUS CDS 425521 431403 1 + 0 ID=LTnewLM_220015400.1:CDS:1;Parent=LTnewLM_220015400.1 ### LTnewLM_22 . polypeptide 425521 431403 . + . ID=LTnewLM_220015400.1:pep;Derives_from=LTnewLM_220015400.1;orthologous_to=LmjF.22.0970_mRNA;ortholog_cluster=OG0002326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 432196 432396 1 + . ID=LTnewLM_220015500 LTnewLM_22 AUGUSTUS mRNA 432196 432396 1 + . ID=LTnewLM_220015500.1;Parent=LTnewLM_220015500 LTnewLM_22 AUGUSTUS CDS 432196 432396 1 + 0 ID=LTnewLM_220015500.1:CDS:1;Parent=LTnewLM_220015500.1 ### LTnewLM_22 . polypeptide 432196 432396 . + . ID=LTnewLM_220015500.1:pep;Derives_from=LTnewLM_220015500.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 433707 436478 1 + . ID=LTnewLM_220015600 LTnewLM_22 AUGUSTUS mRNA 433707 436478 1 + . ID=LTnewLM_220015600.1;Parent=LTnewLM_220015600 LTnewLM_22 AUGUSTUS CDS 433707 436478 1 + 0 ID=LTnewLM_220015600.1:CDS:1;Parent=LTnewLM_220015600.1 ### LTnewLM_22 . polypeptide 433707 436478 . + . ID=LTnewLM_220015600.1:pep;Derives_from=LTnewLM_220015600.1;orthologous_to=LmjF.22.0980_mRNA;ortholog_cluster=OG0002327;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 437580 441227 1 + . ID=LTnewLM_220015700 LTnewLM_22 AUGUSTUS mRNA 437580 441227 1 + . ID=LTnewLM_220015700.1;Parent=LTnewLM_220015700 LTnewLM_22 AUGUSTUS CDS 437580 441227 1 + 0 ID=LTnewLM_220015700.1:CDS:1;Parent=LTnewLM_220015700.1 ### LTnewLM_22 . polypeptide 437580 441227 . + . ID=LTnewLM_220015700.1:pep;Derives_from=LTnewLM_220015700.1;orthologous_to=LmjF.22.0990_mRNA;ortholog_cluster=OG0002328;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 442676 444439 1 + . ID=LTnewLM_220015800 LTnewLM_22 AUGUSTUS mRNA 442676 444439 1 + . ID=LTnewLM_220015800.1;Parent=LTnewLM_220015800 LTnewLM_22 AUGUSTUS CDS 442676 444439 1 + 0 ID=LTnewLM_220015800.1:CDS:1;Parent=LTnewLM_220015800.1 ### LTnewLM_22 . polypeptide 442676 444439 . + . ID=LTnewLM_220015800.1:pep;Derives_from=LTnewLM_220015800.1;orthologous_to=LmjF.22.1000_mRNA;ortholog_cluster=OG0002329;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 446652 448406 1 + . ID=LTnewLM_220015900 LTnewLM_22 AUGUSTUS mRNA 446652 448406 1 + . ID=LTnewLM_220015900.1;Parent=LTnewLM_220015900 LTnewLM_22 AUGUSTUS CDS 446652 448406 1 + 0 ID=LTnewLM_220015900.1:CDS:1;Parent=LTnewLM_220015900.1 ### LTnewLM_22 . polypeptide 446652 448406 . + . ID=LTnewLM_220015900.1:pep;Derives_from=LTnewLM_220015900.1;orthologous_to=LmjF.22.1010_mRNA;ortholog_cluster=OG0002330;product=term%3DUAA transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08449;Ontology_term=GO:0055085 LTnewLM_22 Pfam protein_match 447234 448124 . + . Parent=LTnewLM_220015900.1:pep;Name=PF08449;signature_desc=UAA transporter family;Ontology_term=GO:0055085 ### LTnewLM_22 . pseudogene 450533 451843 . + . ID=LTnewLM_220016000:pseudogene;coverage=0.987;sequence_ID=0.908;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1020_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 450533 451843 . + . ID=LTnewLM_220016000.1;Parent=LTnewLM_220016000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 450533 451843 . + . ID=LTnewLM_220016000.1:pseudogenic_exon:1;Parent=LTnewLM_220016000.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 450533 451843 . + . ID=LTnewLM_220016000.1:pep;Derives_from=LTnewLM_220016000.1;orthologous_to=LmjF.22.1020_mRNA;ortholog_cluster=OG0007507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 452634 456362 1 + . ID=LTnewLM_220016100 LTnewLM_22 AUGUSTUS mRNA 452634 456362 1 + . ID=LTnewLM_220016100.1;Parent=LTnewLM_220016100 LTnewLM_22 AUGUSTUS CDS 452634 456362 1 + 0 ID=LTnewLM_220016100.1:CDS:1;Parent=LTnewLM_220016100.1 ### LTnewLM_22 . polypeptide 452634 456362 . + . ID=LTnewLM_220016100.1:pep;Derives_from=LTnewLM_220016100.1;orthologous_to=LmjF.22.1030_mRNA;ortholog_cluster=OG0002331;product=term%3DKelch motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13854 LTnewLM_22 Pfam protein_match 453696 453815 . + . Parent=LTnewLM_220016100.1:pep;Name=PF13854;signature_desc=Kelch motif LTnewLM_22 Pfam protein_match 453879 453956 . + . Parent=LTnewLM_220016100.1:pep;Name=PF13854;signature_desc=Kelch motif ### LTnewLM_22 AUGUSTUS gene 457997 460033 1 + . ID=LTnewLM_220016200 LTnewLM_22 AUGUSTUS mRNA 457997 460033 1 + . ID=LTnewLM_220016200.1;Parent=LTnewLM_220016200 LTnewLM_22 AUGUSTUS CDS 457997 460033 1 + 0 ID=LTnewLM_220016200.1:CDS:1;Parent=LTnewLM_220016200.1 ### LTnewLM_22 . polypeptide 457997 460033 . + . ID=LTnewLM_220016200.1:pep;Derives_from=LTnewLM_220016200.1;orthologous_to=LmjF.22.1040_mRNA;ortholog_cluster=OG0002332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 461423 464320 1 + . ID=LTnewLM_220016300 LTnewLM_22 AUGUSTUS mRNA 461423 464320 1 + . ID=LTnewLM_220016300.1;Parent=LTnewLM_220016300 LTnewLM_22 AUGUSTUS CDS 461423 464320 1 + 0 ID=LTnewLM_220016300.1:CDS:1;Parent=LTnewLM_220016300.1 ### LTnewLM_22 . polypeptide 461423 464320 . + . ID=LTnewLM_220016300.1:pep;Derives_from=LTnewLM_220016300.1;orthologous_to=LmjF.22.1050_mRNA;ortholog_cluster=OG0002333;product=term%3DMajor Facilitator Superfamily/Sugar (and other) transporter/Uncharacterised MFS-type transporter YbfB/Organic Anion Transporter Polypeptide (OATP) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF00083|Pfam:PF06779|Pfam:PF03137;Ontology_term=GO:0006810,GO:0016020,GO:0016021,GO:0055085,GO:0022857,GO:0005215 LTnewLM_22 Pfam protein_match 461807 463081 . + . Parent=LTnewLM_220016300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_22 Pfam protein_match 461846 462271 . + . Parent=LTnewLM_220016300.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_22 Pfam protein_match 461858 462289 . + . Parent=LTnewLM_220016300.1:pep;Name=PF06779;signature_desc=Uncharacterised MFS-type transporter YbfB LTnewLM_22 Pfam protein_match 462554 462913 . + . Parent=LTnewLM_220016300.1:pep;Name=PF03137;signature_desc=Organic Anion Transporter Polypeptide (OATP) family;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_22 AUGUSTUS gene 465873 466184 1 + . ID=LTnewLM_220016400 LTnewLM_22 AUGUSTUS mRNA 465873 466184 1 + . ID=LTnewLM_220016400.1;Parent=LTnewLM_220016400 LTnewLM_22 AUGUSTUS CDS 465873 466184 1 + 0 ID=LTnewLM_220016400.1:CDS:1;Parent=LTnewLM_220016400.1 ### LTnewLM_22 . polypeptide 465873 466184 . + . ID=LTnewLM_220016400.1:pep;Derives_from=LTnewLM_220016400.1;orthologous_to=LmjF.22.1060_mRNA;ortholog_cluster=OG0002334;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_22 Pfam protein_match 465918 466106 . + . Parent=LTnewLM_220016400.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_22 AUGUSTUS gene 467441 469741 1 + . ID=LTnewLM_220016500 LTnewLM_22 AUGUSTUS mRNA 467441 469741 1 + . ID=LTnewLM_220016500.1;Parent=LTnewLM_220016500 LTnewLM_22 AUGUSTUS CDS 467441 469741 1 + 0 ID=LTnewLM_220016500.1:CDS:1;Parent=LTnewLM_220016500.1 ### LTnewLM_22 . polypeptide 467441 469741 . + . ID=LTnewLM_220016500.1:pep;Derives_from=LTnewLM_220016500.1;orthologous_to=LmjF.22.1070_mRNA;ortholog_cluster=OG0002335;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 470747 471505 1 + . ID=LTnewLM_220016600 LTnewLM_22 AUGUSTUS mRNA 470747 471505 1 + . ID=LTnewLM_220016600.1;Parent=LTnewLM_220016600 LTnewLM_22 AUGUSTUS CDS 470747 471505 1 + 0 ID=LTnewLM_220016600.1:CDS:1;Parent=LTnewLM_220016600.1 ### LTnewLM_22 . polypeptide 470747 471505 . + . ID=LTnewLM_220016600.1:pep;Derives_from=LTnewLM_220016600.1;orthologous_to=LmjF.22.1080_mRNA;ortholog_cluster=OG0002336;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 472794 474932 1 + . ID=LTnewLM_220016700 LTnewLM_22 AUGUSTUS mRNA 472794 474932 1 + . ID=LTnewLM_220016700.1;Parent=LTnewLM_220016700 LTnewLM_22 AUGUSTUS CDS 472794 474932 1 + 0 ID=LTnewLM_220016700.1:CDS:1;Parent=LTnewLM_220016700.1 ### LTnewLM_22 . polypeptide 472794 474932 . + . ID=LTnewLM_220016700.1:pep;Derives_from=LTnewLM_220016700.1;orthologous_to=LmjF.22.1090_mRNA;ortholog_cluster=OG0002337;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_22 Pfam protein_match 473145 473741 . + . Parent=LTnewLM_220016700.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_22 AUGUSTUS gene 476883 484382 1 + . ID=LTnewLM_220016800 LTnewLM_22 AUGUSTUS mRNA 476883 484382 1 + . ID=LTnewLM_220016800.1;Parent=LTnewLM_220016800 LTnewLM_22 AUGUSTUS CDS 476883 484382 1 + 0 ID=LTnewLM_220016800.1:CDS:1;Parent=LTnewLM_220016800.1 ### LTnewLM_22 . polypeptide 476883 484382 . + . ID=LTnewLM_220016800.1:pep;Derives_from=LTnewLM_220016800.1;orthologous_to=LmjF.22.1100_mRNA;ortholog_cluster=OG0002338;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920 LTnewLM_22 Pfam protein_match 484188 484310 . + . Parent=LTnewLM_220016800.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_22 AUGUSTUS gene 486198 503183 2.19 + . ID=LTnewLM_220016900 LTnewLM_22 AUGUSTUS mRNA 486198 503183 0.19 + . ID=LTnewLM_220016900.1;Parent=LTnewLM_220016900 LTnewLM_22 AUGUSTUS CDS 486198 490976 0.25 + 0 ID=LTnewLM_220016900.1:CDS:1;Parent=LTnewLM_220016900.1 LTnewLM_22 AUGUSTUS CDS 491037 503183 0.19 + 0 ID=LTnewLM_220016900.1:CDS:2;Parent=LTnewLM_220016900.1 LTnewLM_22 AUGUSTUS mRNA 498198 503183 1 + . ID=LTnewLM_220016900.2;Parent=LTnewLM_220016900 LTnewLM_22 AUGUSTUS CDS 498198 503183 1 + 0 ID=LTnewLM_220016900.2:CDS:1;Parent=LTnewLM_220016900.2 LTnewLM_22 AUGUSTUS mRNA 502812 503183 1 + . ID=LTnewLM_220016900.3;Parent=LTnewLM_220016900 LTnewLM_22 AUGUSTUS CDS 502812 503183 1 + 0 ID=LTnewLM_220016900.3:CDS:1;Parent=LTnewLM_220016900.3 ### LTnewLM_22 . polypeptide 486198 503183 . + . ID=LTnewLM_220016900.1:pep;Derives_from=LTnewLM_220016900.1;orthologous_to=LTnewLM_220016900.2,LTnewLM_220016900.3,LmjF.22.1110_mRNA;ortholog_cluster=OG0000166;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/P-loop containing dynein motor region/ATPase family associated with various cellular activities (AAA)/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain AAA lid domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF12775|Pfam:PF00004|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_22 Pfam protein_match 491541 492782 . + . Parent=LTnewLM_220016900.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_22 Pfam protein_match 493371 494408 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_22 Pfam protein_match 494373 494951 . + . Parent=LTnewLM_220016900.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_22 Pfam protein_match 495894 496424 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_22 Pfam protein_match 495990 496358 . + . Parent=LTnewLM_220016900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_22 Pfam protein_match 496950 497345 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_22 Pfam protein_match 497583 497975 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_22 Pfam protein_match 498024 499022 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_22 Pfam protein_match 499107 499760 . + . Parent=LTnewLM_220016900.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_22 Pfam protein_match 500808 501185 . + . Parent=LTnewLM_220016900.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_22 Pfam protein_match 501348 501809 . + . Parent=LTnewLM_220016900.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_22 Pfam protein_match 502122 503096 . + . Parent=LTnewLM_220016900.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_22 . polypeptide 498198 503183 . + . ID=LTnewLM_220016900.2:pep;Derives_from=LTnewLM_220016900.2;orthologous_to=LTnewLM_220016900.1,LTnewLM_220016900.3,LmjF.22.1110_mRNA;ortholog_cluster=OG0000166;product=term%3DMicrotubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain AAA lid domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0030286,GO:0007018,GO:0003777 LTnewLM_22 Pfam protein_match 498216 499082 . + . Parent=LTnewLM_220016900.2:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_22 Pfam protein_match 499167 499820 . + . Parent=LTnewLM_220016900.2:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_22 Pfam protein_match 500868 501245 . + . Parent=LTnewLM_220016900.2:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_22 Pfam protein_match 501408 501869 . + . Parent=LTnewLM_220016900.2:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_22 Pfam protein_match 502182 503156 . + . Parent=LTnewLM_220016900.2:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_22 . polypeptide 502812 503183 . + . ID=LTnewLM_220016900.3:pep;Derives_from=LTnewLM_220016900.3;orthologous_to=LTnewLM_220016900.1,LTnewLM_220016900.2,LmjF.22.1110_mRNA;ortholog_cluster=OG0000166;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 504231 505631 1 + . ID=LTnewLM_220017000 LTnewLM_22 AUGUSTUS mRNA 504231 505631 1 + . ID=LTnewLM_220017000.1;Parent=LTnewLM_220017000 LTnewLM_22 AUGUSTUS CDS 504231 505631 1 + 0 ID=LTnewLM_220017000.1:CDS:1;Parent=LTnewLM_220017000.1 ### LTnewLM_22 . polypeptide 504231 505631 . + . ID=LTnewLM_220017000.1:pep;Derives_from=LTnewLM_220017000.1;orthologous_to=LmjF.22.1120_mRNA;ortholog_cluster=OG0002339;product=term%3DMetallo-beta-lactamase superfamily/Beta-lactamase superfamily domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00753|Pfam:PF12706 LTnewLM_22 Pfam protein_match 504648 504785 . + . Parent=LTnewLM_220017000.1:pep;Name=PF00753;signature_desc=Metallo-beta-lactamase superfamily LTnewLM_22 Pfam protein_match 504651 504911 . + . Parent=LTnewLM_220017000.1:pep;Name=PF12706;signature_desc=Beta-lactamase superfamily domain ### LTnewLM_22 AUGUSTUS gene 506229 507514 0.62 + . ID=LTnewLM_220017100 LTnewLM_22 AUGUSTUS mRNA 506229 507514 0.62 + . ID=LTnewLM_220017100.1;Parent=LTnewLM_220017100 LTnewLM_22 AUGUSTUS CDS 506229 507008 0.62 + 0 ID=LTnewLM_220017100.1:CDS:1;Parent=LTnewLM_220017100.1 LTnewLM_22 AUGUSTUS CDS 507053 507514 0.88 + 0 ID=LTnewLM_220017100.1:CDS:2;Parent=LTnewLM_220017100.1 ### LTnewLM_22 . polypeptide 506229 507514 . + . ID=LTnewLM_220017100.1:pep;Derives_from=LTnewLM_220017100.1;orthologous_to=LmjF.22.1130_mRNA;ortholog_cluster=OG0002340;product=term%3DBeta-lactamase superfamily domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12706 LTnewLM_22 Pfam protein_match 506424 506651 . + . Parent=LTnewLM_220017100.1:pep;Name=PF12706;signature_desc=Beta-lactamase superfamily domain ### LTnewLM_22 AUGUSTUS gene 508294 509595 1 + . ID=LTnewLM_220017200 LTnewLM_22 AUGUSTUS mRNA 508294 509595 1 + . ID=LTnewLM_220017200.1;Parent=LTnewLM_220017200 LTnewLM_22 AUGUSTUS CDS 508294 509595 1 + 0 ID=LTnewLM_220017200.1:CDS:1;Parent=LTnewLM_220017200.1 ### LTnewLM_22 . polypeptide 508294 509595 . + . ID=LTnewLM_220017200.1:pep;Derives_from=LTnewLM_220017200.1;orthologous_to=LmjF.22.1140_mRNA;ortholog_cluster=OG0002341;product=term%3DAdaptor complexes medium subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00928;Ontology_term=GO:0016192,GO:0005515,GO:0006886,GO:0030131 LTnewLM_22 Pfam protein_match 508789 509583 . + . Parent=LTnewLM_220017200.1:pep;Name=PF00928;signature_desc=Adaptor complexes medium subunit family;Ontology_term=GO:0005515,GO:0006886,GO:0016192,GO:0030131 ### LTnewLM_22 AUGUSTUS gene 510718 513879 1 + . ID=LTnewLM_220017300 LTnewLM_22 AUGUSTUS mRNA 510718 513879 1 + . ID=LTnewLM_220017300.1;Parent=LTnewLM_220017300 LTnewLM_22 AUGUSTUS CDS 510718 513879 1 + 0 ID=LTnewLM_220017300.1:CDS:1;Parent=LTnewLM_220017300.1 ### LTnewLM_22 . polypeptide 510718 513879 . + . ID=LTnewLM_220017300.1:pep;Derives_from=LTnewLM_220017300.1;orthologous_to=LmjF.22.1150_mRNA;ortholog_cluster=OG0002342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 514828 516168 1 + . ID=LTnewLM_220017400 LTnewLM_22 AUGUSTUS mRNA 514828 516168 1 + . ID=LTnewLM_220017400.1;Parent=LTnewLM_220017400 LTnewLM_22 AUGUSTUS CDS 514828 516168 1 + 0 ID=LTnewLM_220017400.1:CDS:1;Parent=LTnewLM_220017400.1 ### LTnewLM_22 . polypeptide 514828 516168 . + . ID=LTnewLM_220017400.1:pep;Derives_from=LTnewLM_220017400.1;orthologous_to=LmjF.22.1160_mRNA;ortholog_cluster=OG0002343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 516949 519894 1 + . ID=LTnewLM_220017500 LTnewLM_22 AUGUSTUS mRNA 516949 519894 1 + . ID=LTnewLM_220017500.1;Parent=LTnewLM_220017500 LTnewLM_22 AUGUSTUS CDS 516949 519894 1 + 0 ID=LTnewLM_220017500.1:CDS:1;Parent=LTnewLM_220017500.1 ### LTnewLM_22 . polypeptide 516949 519894 . + . ID=LTnewLM_220017500.1:pep;Derives_from=LTnewLM_220017500.1;orthologous_to=LmjF.22.1170_mRNA;ortholog_cluster=OG0002344;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_22 Pfam protein_match 517810 518310 . + . Parent=LTnewLM_220017500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_22 Pfam protein_match 517870 518328 . + . Parent=LTnewLM_220017500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_22 AUGUSTUS gene 521624 523111 1 + . ID=LTnewLM_220017600 LTnewLM_22 AUGUSTUS mRNA 521624 523111 1 + . ID=LTnewLM_220017600.1;Parent=LTnewLM_220017600 LTnewLM_22 AUGUSTUS CDS 521624 523111 1 + 0 ID=LTnewLM_220017600.1:CDS:1;Parent=LTnewLM_220017600.1 ### LTnewLM_22 . polypeptide 521624 523111 . + . ID=LTnewLM_220017600.1:pep;Derives_from=LTnewLM_220017600.1;orthologous_to=LmjF.22.1180_mRNA;ortholog_cluster=OG0002345;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 523741 524453 . + . ID=LTnewLM_220017700:pseudogene;coverage=0.998;sequence_ID=0.957;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1190_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 523741 524453 . + . ID=LTnewLM_220017700.1;Parent=LTnewLM_220017700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 523741 524453 . + . ID=LTnewLM_220017700.1:pseudogenic_exon:1;Parent=LTnewLM_220017700.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 523741 524453 . + . ID=LTnewLM_220017700.1:pep;Derives_from=LTnewLM_220017700.1;orthologous_to=LmjF.22.1190_mRNA;ortholog_cluster=OG0007508;product=term%3DChaC-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04752 LTnewLM_22 Pfam protein_match 523828 524397 . + . Parent=LTnewLM_220017700.1:pep;Name=PF04752;signature_desc=ChaC-like protein ### LTnewLM_22 AUGUSTUS gene 525375 526346 1 + . ID=LTnewLM_220017800 LTnewLM_22 AUGUSTUS mRNA 525375 526346 1 + . ID=LTnewLM_220017800.1;Parent=LTnewLM_220017800 LTnewLM_22 AUGUSTUS CDS 525375 526346 1 + 0 ID=LTnewLM_220017800.1:CDS:1;Parent=LTnewLM_220017800.1 ### LTnewLM_22 . polypeptide 525375 526346 . + . ID=LTnewLM_220017800.1:pep;Derives_from=LTnewLM_220017800.1;orthologous_to=LmjF.22.1200_mRNA;ortholog_cluster=OG0002346;product=term%3DChaC-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04752 LTnewLM_22 Pfam protein_match 525591 526274 . + . Parent=LTnewLM_220017800.1:pep;Name=PF04752;signature_desc=ChaC-like protein ### LTnewLM_22 Liftoff gene 528798 533600 . + . ID=LTnewLM_220017900;coverage=0.999;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.22.1210_0 LTnewLM_22 Liftoff mRNA 528798 533600 . + . ID=LTnewLM_220017900.1;Parent=LTnewLM_220017900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 528798 533600 . + 0 ID=LTnewLM_220017900.1:CDS:1;Parent=LTnewLM_220017900.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 528798 533600 . + . ID=LTnewLM_220017900.1:pep;Derives_from=LTnewLM_220017900.1;orthologous_to=LmjF.22.1210_mRNA;ortholog_cluster=OG0002347;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_22 Pfam protein_match 531102 531197 . + . Parent=LTnewLM_220017900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_22 AUGUSTUS gene 534045 534536 1 + . ID=LTnewLM_220018000 LTnewLM_22 AUGUSTUS mRNA 534045 534536 1 + . ID=LTnewLM_220018000.1;Parent=LTnewLM_220018000 LTnewLM_22 AUGUSTUS CDS 534045 534536 1 + 0 ID=LTnewLM_220018000.1:CDS:1;Parent=LTnewLM_220018000.1 ### LTnewLM_22 . polypeptide 534045 534536 . + . ID=LTnewLM_220018000.1:pep;Derives_from=LTnewLM_220018000.1;orthologous_to=LmjF.22.1220_mRNA;ortholog_cluster=OG0002348;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 535458 538370 1 - . ID=LTnewLM_220018100 LTnewLM_22 AUGUSTUS mRNA 535458 538370 1 - . ID=LTnewLM_220018100.1;Parent=LTnewLM_220018100 LTnewLM_22 AUGUSTUS CDS 535458 538370 1 - 0 ID=LTnewLM_220018100.1:CDS:1;Parent=LTnewLM_220018100.1 ### LTnewLM_22 . polypeptide 535458 538370 . - . ID=LTnewLM_220018100.1:pep;Derives_from=LTnewLM_220018100.1;orthologous_to=LmjF.22.1230_mRNA;ortholog_cluster=OG0002349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . polypeptide 539637 541763 . - . ID=LTnewLM_220018200.1:pep;Derives_from=LTnewLM_220018200.1;orthologous_to=LTnewLM_220018200.2,LmjF.22.1240_mRNA;ortholog_cluster=OG0000385;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926;Ontology_term=GO:0003924,GO:0005525 LTnewLM_22 Pfam protein_match 540948 541418 . - . Parent=LTnewLM_220018200.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_22 Pfam protein_match 541098 541415 . - . Parent=LTnewLM_220018200.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_22 AUGUSTUS gene 539637 542171 1.83 - . ID=LTnewLM_220018200 LTnewLM_22 AUGUSTUS mRNA 539637 541763 0.83 - . ID=LTnewLM_220018200.1;Parent=LTnewLM_220018200 LTnewLM_22 AUGUSTUS CDS 539637 541763 0.83 - 0 ID=LTnewLM_220018200.1:CDS:1;Parent=LTnewLM_220018200.1 LTnewLM_22 AUGUSTUS mRNA 539637 542171 1 - . ID=LTnewLM_220018200.2;Parent=LTnewLM_220018200 LTnewLM_22 AUGUSTUS CDS 539637 542171 1 - 0 ID=LTnewLM_220018200.2:CDS:1;Parent=LTnewLM_220018200.2 ### LTnewLM_22 . polypeptide 539637 542171 . - . ID=LTnewLM_220018200.2:pep;Derives_from=LTnewLM_220018200.2;orthologous_to=LTnewLM_220018200.1,LmjF.22.1240_mRNA;ortholog_cluster=OG0000385;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926;Ontology_term=GO:0003924,GO:0005525 LTnewLM_22 Pfam protein_match 540948 541418 . - . Parent=LTnewLM_220018200.2:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_22 Pfam protein_match 541098 541415 . - . Parent=LTnewLM_220018200.2:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_22 AUGUSTUS gene 544044 545402 1 - . ID=LTnewLM_220018300 LTnewLM_22 AUGUSTUS mRNA 544044 545402 1 - . ID=LTnewLM_220018300.1;Parent=LTnewLM_220018300 LTnewLM_22 AUGUSTUS CDS 544044 545402 1 - 0 ID=LTnewLM_220018300.1:CDS:1;Parent=LTnewLM_220018300.1 ### LTnewLM_22 . polypeptide 544044 545402 . - . ID=LTnewLM_220018300.1:pep;Derives_from=LTnewLM_220018300.1;orthologous_to=LmjF.22.1250_mRNA;ortholog_cluster=OG0002350;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_22 Pfam protein_match 545130 545237 . - . Parent=LTnewLM_220018300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_22 AUGUSTUS gene 546499 549711 1 - . ID=LTnewLM_220018400 LTnewLM_22 AUGUSTUS mRNA 546499 549711 1 - . ID=LTnewLM_220018400.1;Parent=LTnewLM_220018400 LTnewLM_22 AUGUSTUS CDS 546499 549711 1 - 0 ID=LTnewLM_220018400.1:CDS:1;Parent=LTnewLM_220018400.1 ### LTnewLM_22 . polypeptide 546499 549711 . - . ID=LTnewLM_220018400.1:pep;Derives_from=LTnewLM_220018400.1;orthologous_to=LmjF.22.1260_mRNA;ortholog_cluster=OG0002351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 551273 552511 1 - . ID=LTnewLM_220018500 LTnewLM_22 AUGUSTUS mRNA 551273 552511 1 - . ID=LTnewLM_220018500.1;Parent=LTnewLM_220018500 LTnewLM_22 AUGUSTUS CDS 551273 552511 1 - 0 ID=LTnewLM_220018500.1:CDS:1;Parent=LTnewLM_220018500.1 ### LTnewLM_22 . polypeptide 551273 552511 . - . ID=LTnewLM_220018500.1:pep;Derives_from=LTnewLM_220018500.1;orthologous_to=LmjF.22.1270_mRNA;ortholog_cluster=OG0002352;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_22 Pfam protein_match 552044 552103 . - . Parent=LTnewLM_220018500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 552371 552415 . - . Parent=LTnewLM_220018500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 552419 552457 . - . Parent=LTnewLM_220018500.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_22 AUGUSTUS gene 553845 555011 1 - . ID=LTnewLM_220018600 LTnewLM_22 AUGUSTUS mRNA 553845 555011 1 - . ID=LTnewLM_220018600.1;Parent=LTnewLM_220018600 LTnewLM_22 AUGUSTUS CDS 553845 555011 1 - 0 ID=LTnewLM_220018600.1:CDS:1;Parent=LTnewLM_220018600.1 ### LTnewLM_22 . polypeptide 553845 555011 . - . ID=LTnewLM_220018600.1:pep;Derives_from=LTnewLM_220018600.1;orthologous_to=LmjF.22.1280_mRNA;ortholog_cluster=OG0002353;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 557574 558752 1 - . ID=LTnewLM_220018700 LTnewLM_22 AUGUSTUS mRNA 557574 558752 1 - . ID=LTnewLM_220018700.1;Parent=LTnewLM_220018700 LTnewLM_22 AUGUSTUS CDS 557574 558752 1 - 0 ID=LTnewLM_220018700.1:CDS:1;Parent=LTnewLM_220018700.1 ### LTnewLM_22 . polypeptide 557574 558752 . - . ID=LTnewLM_220018700.1:pep;Derives_from=LTnewLM_220018700.1;orthologous_to=LTnewLM_270027100.1,LmjF.22.1290_mRNA,LmjF.27.2050_mRNA;ortholog_cluster=OG0000167;product=term%3DRibonucleotide reductase%2C small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00268;Ontology_term=GO:0009186,GO:0055114 LTnewLM_22 Pfam protein_match 557712 558512 . - . Parent=LTnewLM_220018700.1:pep;Name=PF00268;signature_desc=Ribonucleotide reductase%2C small chain;Ontology_term=GO:0009186,GO:0055114 ### LTnewLM_22 . pseudogene 560257 561420 . - . ID=LTnewLM_220018800:pseudogene;coverage=0.997;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1300_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 560257 561420 . - . ID=LTnewLM_220018800.1;Parent=LTnewLM_220018800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 560257 561420 . - . ID=LTnewLM_220018800.1:pseudogenic_exon:1;Parent=LTnewLM_220018800.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 560257 561420 . - . ID=LTnewLM_220018800.1:pep;Derives_from=LTnewLM_220018800.1;orthologous_to=LmjF.22.1300_mRNA;ortholog_cluster=OG0007509;product=term%3DAutophagy protein Atg8 ubiquitin like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02991 LTnewLM_22 Pfam protein_match 560326 560535 . - . Parent=LTnewLM_220018800.1:pep;Name=PF02991;signature_desc=Autophagy protein Atg8 ubiquitin like ### LTnewLM_22 AUGUSTUS gene 566868 570296 1 - . ID=LTnewLM_220018900 LTnewLM_22 AUGUSTUS mRNA 566868 570296 1 - . ID=LTnewLM_220018900.1;Parent=LTnewLM_220018900 LTnewLM_22 AUGUSTUS CDS 566868 570296 1 - 0 ID=LTnewLM_220018900.1:CDS:1;Parent=LTnewLM_220018900.1 ### LTnewLM_22 . polypeptide 566868 570296 . - . ID=LTnewLM_220018900.1:pep;Derives_from=LTnewLM_220018900.1;orthologous_to=LmjF.22.1310_mRNA;ortholog_cluster=OG0002354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 571463 579769 . - . ID=LTnewLM_220019000:pseudogene;coverage=0.995;sequence_ID=0.674;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1320_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 571463 579769 . - . ID=LTnewLM_220019000.1;Parent=LTnewLM_220019000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 571463 579769 . - . ID=LTnewLM_220019000.1:pseudogenic_exon:1;Parent=LTnewLM_220019000.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 571463 579769 . - . ID=LTnewLM_220019000.1:pep;Derives_from=LTnewLM_220019000.1;orthologous_to=LmjF.22.1320_mRNA;ortholog_cluster=OG0007510;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 583335 588866 . - . ID=LTnewLM_220019100:pseudogene;coverage=0.916;sequence_ID=0.843;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1330_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 583335 588866 . - . ID=LTnewLM_220019100.1;Parent=LTnewLM_220019100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 583335 588866 . - . ID=LTnewLM_220019100.1:pseudogenic_exon:1;Parent=LTnewLM_220019100.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 583335 588866 . - . ID=LTnewLM_220019100.1:pep;Derives_from=LTnewLM_220019100.1;orthologous_to=LmjF.22.1330_mRNA;ortholog_cluster=OG0007511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 591648 593574 . - . ID=LTnewLM_220019200:pseudogene;coverage=0.998;sequence_ID=0.963;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1340_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 591648 593574 . - . ID=LTnewLM_220019200.1;Parent=LTnewLM_220019200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 591648 593574 . - . ID=LTnewLM_220019200.1:pseudogenic_exon:1;Parent=LTnewLM_220019200.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 591648 593574 . - . ID=LTnewLM_220019200.1:pep;Derives_from=LTnewLM_220019200.1;product=term%3Dhypothetical protein ### LTnewLM_22 . polypeptide 595262 596446 . - . ID=LTnewLM_220019300.1:pep;Derives_from=LTnewLM_220019300.1;orthologous_to=LmjF.22.1350.1_mRNA,LmjF.22.1350.2_mRNA;ortholog_cluster=OG0000522;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_22 Pfam protein_match 595682 596098 . - . Parent=LTnewLM_220019300.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_22 . polypeptide 595262 596637 . - . ID=LTnewLM_220019300.2:pep;Derives_from=LTnewLM_220019300.2;product=term%3Dhypothetical protein ### LTnewLM_22 . pseudogene 595262 598617 . - . ID=LTnewLM_220019300:pseudogene;coverage=0.960;sequence_ID=0.885;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.22.1350_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 595262 596548 . - . ID=LTnewLM_220019300.1;Parent=LTnewLM_220019300:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 595262 596446 . - . ID=LTnewLM_220019300.1:pseudogenic_exon:1;Parent=LTnewLM_220019300.1;extra_copy_number=0 LTnewLM_22 . pseudogenic_transcript 595262 598617 . - . ID=LTnewLM_220019300.2;Parent=LTnewLM_220019300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 595262 596637 . - . ID=LTnewLM_220019300.2:pseudogenic_exon:1;Parent=LTnewLM_220019300.2;extra_copy_number=0 ### LTnewLM_22 AUGUSTUS gene 599668 600756 1 - . ID=LTnewLM_220019400 LTnewLM_22 AUGUSTUS mRNA 599668 600756 1 - . ID=LTnewLM_220019400.1;Parent=LTnewLM_220019400 LTnewLM_22 AUGUSTUS CDS 599668 600756 1 - 0 ID=LTnewLM_220019400.1:CDS:1;Parent=LTnewLM_220019400.1 ### LTnewLM_22 . polypeptide 599668 600756 . - . ID=LTnewLM_220019400.1:pep;Derives_from=LTnewLM_220019400.1;orthologous_to=LmjF.22.1360_mRNA;ortholog_cluster=OG0002355;product=term%3DPolyprenyl synthetase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00348;Ontology_term=GO:0008299 LTnewLM_22 Pfam protein_match 599821 600654 . - . Parent=LTnewLM_220019400.1:pep;Name=PF00348;signature_desc=Polyprenyl synthetase;Ontology_term=GO:0008299 ### LTnewLM_22 AUGUSTUS gene 602203 603993 1 - . ID=LTnewLM_220019500 LTnewLM_22 AUGUSTUS mRNA 602203 603993 1 - . ID=LTnewLM_220019500.1;Parent=LTnewLM_220019500 LTnewLM_22 AUGUSTUS CDS 602203 603993 1 - 0 ID=LTnewLM_220019500.1:CDS:1;Parent=LTnewLM_220019500.1 ### LTnewLM_22 . polypeptide 602203 603993 . - . ID=LTnewLM_220019500.1:pep;Derives_from=LTnewLM_220019500.1;orthologous_to=LmjF.22.1370_mRNA;ortholog_cluster=OG0002356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 . pseudogene 605927 606854 . - . ID=LTnewLM_220019600:pseudogene;coverage=0.997;sequence_ID=0.959;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1380_0;has_internal_stop=true LTnewLM_22 . pseudogenic_transcript 605927 606854 . - . ID=LTnewLM_220019600.1;Parent=LTnewLM_220019600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_22 . pseudogenic_exon 605927 606854 . - . ID=LTnewLM_220019600.1:pseudogenic_exon:1;Parent=LTnewLM_220019600.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 605927 606854 . - . ID=LTnewLM_220019600.1:pep;Derives_from=LTnewLM_220019600.1;orthologous_to=LmjF.22.1380_mRNA;ortholog_cluster=OG0007512;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 607547 608782 1 - . ID=LTnewLM_220019700 LTnewLM_22 AUGUSTUS mRNA 607547 608782 1 - . ID=LTnewLM_220019700.1;Parent=LTnewLM_220019700 LTnewLM_22 AUGUSTUS CDS 607547 608782 1 - 0 ID=LTnewLM_220019700.1:CDS:1;Parent=LTnewLM_220019700.1 ### LTnewLM_22 . polypeptide 607547 608782 . - . ID=LTnewLM_220019700.1:pep;Derives_from=LTnewLM_220019700.1;orthologous_to=LmjF.22.1390_mRNA;ortholog_cluster=OG0002357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 609670 611250 1 - . ID=LTnewLM_220019800 LTnewLM_22 AUGUSTUS mRNA 609670 611250 1 - . ID=LTnewLM_220019800.1;Parent=LTnewLM_220019800 LTnewLM_22 AUGUSTUS CDS 609670 611250 1 - 0 ID=LTnewLM_220019800.1:CDS:1;Parent=LTnewLM_220019800.1 ### LTnewLM_22 . polypeptide 609670 611250 . - . ID=LTnewLM_220019800.1:pep;Derives_from=LTnewLM_220019800.1;orthologous_to=LmjF.22.1400_mRNA;ortholog_cluster=OG0002358;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_22 Pfam protein_match 609793 609840 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 609862 609909 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 609922 609975 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610012 610056 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610063 610119 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610156 610200 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610204 610269 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610276 610338 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610345 610407 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610429 610473 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610486 610545 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_22 Pfam protein_match 610573 610620 . - . Parent=LTnewLM_220019800.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_22 AUGUSTUS gene 612934 613383 1 - . ID=LTnewLM_220019900 LTnewLM_22 AUGUSTUS mRNA 612934 613383 1 - . ID=LTnewLM_220019900.1;Parent=LTnewLM_220019900 LTnewLM_22 AUGUSTUS CDS 612934 613383 1 - 0 ID=LTnewLM_220019900.1:CDS:1;Parent=LTnewLM_220019900.1 ### LTnewLM_22 . polypeptide 612934 613383 . - . ID=LTnewLM_220019900.1:pep;Derives_from=LTnewLM_220019900.1;orthologous_to=LmjF.22.1410_mRNA;ortholog_cluster=OG0002359;product=term%3DEF-hand domain pair/EF hand/EF-hand domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13499|Pfam:PF13202|Pfam:PF00036|Pfam:PF13405;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 612955 613104 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_22 Pfam protein_match 612958 613026 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 612958 613029 . - . Parent=LTnewLM_220019900.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 612958 613143 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_22 Pfam protein_match 613084 613134 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 613174 613323 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_22 Pfam protein_match 613177 613368 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_22 Pfam protein_match 613279 613359 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 613282 613359 . - . Parent=LTnewLM_220019900.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 613300 613359 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_22 Pfam protein_match 613303 613374 . - . Parent=LTnewLM_220019900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_22 Liftoff gene 617456 618361 . - . ID=LTnewLM_220020000;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.22.1420_0 LTnewLM_22 Liftoff mRNA 617456 618361 . - . ID=LTnewLM_220020000.1;Parent=LTnewLM_220020000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 617456 618361 . - 0 ID=LTnewLM_220020000.1:CDS:1;Parent=LTnewLM_220020000.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 617456 618361 . - . ID=LTnewLM_220020000.1:pep;Derives_from=LTnewLM_220020000.1;orthologous_to=LmjF.22.1420_mRNA;ortholog_cluster=OG0002360;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_22 Pfam protein_match 617492 618139 . - . Parent=LTnewLM_220020000.1:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_22 AUGUSTUS gene 619338 619673 1 - . ID=LTnewLM_220020100 LTnewLM_22 AUGUSTUS mRNA 619338 619673 1 - . ID=LTnewLM_220020100.1;Parent=LTnewLM_220020100 LTnewLM_22 AUGUSTUS CDS 619338 619673 1 - 0 ID=LTnewLM_220020100.1:CDS:1;Parent=LTnewLM_220020100.1 ### LTnewLM_22 . polypeptide 619338 619673 . - . ID=LTnewLM_220020100.1:pep;Derives_from=LTnewLM_220020100.1;orthologous_to=LmjF.22.1430_mRNA;ortholog_cluster=OG0002361;product=term%3DFKBP-type peptidyl-prolyl cis-trans isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00254;Ontology_term=GO:0006457 LTnewLM_22 Pfam protein_match 619353 619625 . - . Parent=LTnewLM_220020100.1:pep;Name=PF00254;signature_desc=FKBP-type peptidyl-prolyl cis-trans isomerase;Ontology_term=GO:0006457 ### LTnewLM_22 AUGUSTUS gene 624436 625956 1 - . ID=LTnewLM_220020200 LTnewLM_22 AUGUSTUS mRNA 624436 625956 1 - . ID=LTnewLM_220020200.1;Parent=LTnewLM_220020200 LTnewLM_22 AUGUSTUS CDS 624436 625956 1 - 0 ID=LTnewLM_220020200.1:CDS:1;Parent=LTnewLM_220020200.1 ### LTnewLM_22 . polypeptide 624436 625956 . - . ID=LTnewLM_220020200.1:pep;Derives_from=LTnewLM_220020200.1;orthologous_to=LmjF.22.1440_mRNA;ortholog_cluster=OG0002362;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 626693 627382 1 - . ID=LTnewLM_220020300 LTnewLM_22 AUGUSTUS mRNA 626693 627382 1 - . ID=LTnewLM_220020300.1;Parent=LTnewLM_220020300 LTnewLM_22 AUGUSTUS CDS 626693 627382 1 - 0 ID=LTnewLM_220020300.1:CDS:1;Parent=LTnewLM_220020300.1 ### LTnewLM_22 . polypeptide 626693 627382 . - . ID=LTnewLM_220020300.1:pep;Derives_from=LTnewLM_220020300.1;orthologous_to=LmjF.22.1450_mRNA;ortholog_cluster=OG0002363;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_22 Pfam protein_match 626807 627292 . - . Parent=LTnewLM_220020300.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_22 AUGUSTUS gene 629164 629787 1 - . ID=LTnewLM_220020400 LTnewLM_22 AUGUSTUS mRNA 629164 629787 1 - . ID=LTnewLM_220020400.1;Parent=LTnewLM_220020400 LTnewLM_22 AUGUSTUS CDS 629164 629787 1 - 0 ID=LTnewLM_220020400.1:CDS:1;Parent=LTnewLM_220020400.1 ### LTnewLM_22 . polypeptide 629164 629787 . - . ID=LTnewLM_220020400.1:pep;Derives_from=LTnewLM_220020400.1;orthologous_to=LmjF.22.1460_mRNA;ortholog_cluster=OG0002364;product=term%3DEF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833 LTnewLM_22 Pfam protein_match 629371 629517 . - . Parent=LTnewLM_220020400.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_22 AUGUSTUS gene 630225 631562 1 - . ID=LTnewLM_220020500 LTnewLM_22 AUGUSTUS mRNA 630225 631562 1 - . ID=LTnewLM_220020500.1;Parent=LTnewLM_220020500 LTnewLM_22 AUGUSTUS CDS 630225 631562 1 - 0 ID=LTnewLM_220020500.1:CDS:1;Parent=LTnewLM_220020500.1 ### LTnewLM_22 . polypeptide 630225 631562 . - . ID=LTnewLM_220020500.1:pep;Derives_from=LTnewLM_220020500.1;orthologous_to=LmjF.22.1470_mRNA;ortholog_cluster=OG0002365;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 631921 632688 1 - . ID=LTnewLM_220020600 LTnewLM_22 AUGUSTUS mRNA 631921 632688 1 - . ID=LTnewLM_220020600.1;Parent=LTnewLM_220020600 LTnewLM_22 AUGUSTUS CDS 631921 632688 1 - 0 ID=LTnewLM_220020600.1:CDS:1;Parent=LTnewLM_220020600.1 ### LTnewLM_22 . polypeptide 631921 632688 . - . ID=LTnewLM_220020600.1:pep;Derives_from=LTnewLM_220020600.1;orthologous_to=LmjF.22.1480_mRNA;ortholog_cluster=OG0002366;product=term%3DMitochondrial glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02330;Ontology_term=GO:0005759 LTnewLM_22 Pfam protein_match 631933 632340 . - . Parent=LTnewLM_220020600.1:pep;Name=PF02330;signature_desc=Mitochondrial glycoprotein;Ontology_term=GO:0005759 ### LTnewLM_22 AUGUSTUS gene 633400 633735 1 + . ID=LTnewLM_220020700 LTnewLM_22 AUGUSTUS mRNA 633400 633735 1 + . ID=LTnewLM_220020700.1;Parent=LTnewLM_220020700 LTnewLM_22 AUGUSTUS CDS 633400 633735 1 + 0 ID=LTnewLM_220020700.1:CDS:1;Parent=LTnewLM_220020700.1 ### LTnewLM_22 . polypeptide 633400 633735 . + . ID=LTnewLM_220020700.1:pep;Derives_from=LTnewLM_220020700.1;product=term%3Dhypothetical protein ### LTnewLM_22 AUGUSTUS gene 639177 640265 1 + . ID=LTnewLM_220020800 LTnewLM_22 AUGUSTUS mRNA 639177 640265 1 + . ID=LTnewLM_220020800.1;Parent=LTnewLM_220020800 LTnewLM_22 AUGUSTUS CDS 639177 640265 1 + 0 ID=LTnewLM_220020800.1:CDS:1;Parent=LTnewLM_220020800.1 ### LTnewLM_22 . polypeptide 639177 640265 . + . ID=LTnewLM_220020800.1:pep;Derives_from=LTnewLM_220020800.1;orthologous_to=LmjF.22.1490_mRNA;ortholog_cluster=OG0002367;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_22 Pfam protein_match 639288 639986 . + . Parent=LTnewLM_220020800.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_22 Liftoff gene 640609 644268 . + . ID=LTnewLM_220020900;coverage=1.0;sequence_ID=0.959;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.22.1500_0 LTnewLM_22 Liftoff mRNA 640609 644268 . + . ID=LTnewLM_220020900.1;Parent=LTnewLM_220020900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 640609 644268 . + 0 ID=LTnewLM_220020900.1:CDS:1;Parent=LTnewLM_220020900.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 640609 644268 . + . ID=LTnewLM_220020900.1:pep;Derives_from=LTnewLM_220020900.1;orthologous_to=LmjF.22.1500_mRNA;ortholog_cluster=OG0002368;product=term%3DR3H domain/DEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01424|Pfam:PF00270|Pfam:PF00271|Pfam:PF04408;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_22 Pfam protein_match 640915 641085 . + . Parent=LTnewLM_220020900.1:pep;Name=PF01424;signature_desc=R3H domain;Ontology_term=GO:0003676 LTnewLM_22 Pfam protein_match 641422 641892 . + . Parent=LTnewLM_220020900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_22 Pfam protein_match 642208 642588 . + . Parent=LTnewLM_220020900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_22 Pfam protein_match 642784 643002 . + . Parent=LTnewLM_220020900.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 ### LTnewLM_22 AUGUSTUS gene 645164 646657 1 + . ID=LTnewLM_220021000 LTnewLM_22 AUGUSTUS mRNA 645164 646657 1 + . ID=LTnewLM_220021000.1;Parent=LTnewLM_220021000 LTnewLM_22 AUGUSTUS CDS 645164 646657 1 + 0 ID=LTnewLM_220021000.1:CDS:1;Parent=LTnewLM_220021000.1 ### LTnewLM_22 . polypeptide 645164 646657 . + . ID=LTnewLM_220021000.1:pep;Derives_from=LTnewLM_220021000.1;orthologous_to=LmjF.22.1510_mRNA;ortholog_cluster=OG0002369;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 648062 648763 0.75 + . ID=LTnewLM_220021100 LTnewLM_22 AUGUSTUS mRNA 648062 648763 0.75 + . ID=LTnewLM_220021100.1;Parent=LTnewLM_220021100 LTnewLM_22 AUGUSTUS CDS 648062 648763 0.75 + 0 ID=LTnewLM_220021100.1:CDS:1;Parent=LTnewLM_220021100.1 ### LTnewLM_22 . polypeptide 648062 648763 . + . ID=LTnewLM_220021100.1:pep;Derives_from=LTnewLM_220021100.1;orthologous_to=LTnewLM_220021500.1,LmjF.22.1520_mRNA,LmjF.22.1560_mRNA;ortholog_cluster=OG0000168;product=term%3DRibosomal protein L14%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01929;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_22 Pfam protein_match 648377 648592 . + . Parent=LTnewLM_220021100.1:pep;Name=PF01929;signature_desc=Ribosomal protein L14;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 649368 650102 1 + . ID=LTnewLM_220021200 LTnewLM_22 AUGUSTUS mRNA 649368 650102 1 + . ID=LTnewLM_220021200.1;Parent=LTnewLM_220021200 LTnewLM_22 AUGUSTUS CDS 649368 650102 1 + 0 ID=LTnewLM_220021200.1:CDS:1;Parent=LTnewLM_220021200.1 ### LTnewLM_22 . polypeptide 649368 650102 . + . ID=LTnewLM_220021200.1:pep;Derives_from=LTnewLM_220021200.1;orthologous_to=LmjF.22.1530_mRNA;ortholog_cluster=OG0002370;product=term%3DDephospho-CoA kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01121;Ontology_term=GO:0004140,GO:0015937,GO:0005524 LTnewLM_22 Pfam protein_match 649374 649934 . + . Parent=LTnewLM_220021200.1:pep;Name=PF01121;signature_desc=Dephospho-CoA kinase;Ontology_term=GO:0004140,GO:0005524,GO:0015937 ### LTnewLM_22 AUGUSTUS gene 650791 653679 1 + . ID=LTnewLM_220021300 LTnewLM_22 AUGUSTUS mRNA 650791 653679 1 + . ID=LTnewLM_220021300.1;Parent=LTnewLM_220021300 LTnewLM_22 AUGUSTUS CDS 650791 653679 1 + 0 ID=LTnewLM_220021300.1:CDS:1;Parent=LTnewLM_220021300.1 ### LTnewLM_22 . polypeptide 650791 653679 . + . ID=LTnewLM_220021300.1:pep;Derives_from=LTnewLM_220021300.1;orthologous_to=LmjF.22.1540_mRNA;ortholog_cluster=OG0002371;product=term%3DtRNA synthetases class II (A)/Threonyl and Alanyl tRNA synthetase second additional domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01411|Pfam:PF07973;Ontology_term=GO:0000166,GO:0016876,GO:0005524,GO:0043039,GO:0006419,GO:0004813 LTnewLM_22 Pfam protein_match 650821 652566 . + . Parent=LTnewLM_220021300.1:pep;Name=PF01411;signature_desc=tRNA synthetases class II (A);Ontology_term=GO:0000166,GO:0004813,GO:0005524,GO:0006419 LTnewLM_22 Pfam protein_match 652882 653058 . + . Parent=LTnewLM_220021300.1:pep;Name=PF07973;signature_desc=Threonyl and Alanyl tRNA synthetase second additional domain;Ontology_term=GO:0005524,GO:0016876,GO:0043039 ### LTnewLM_22 AUGUSTUS gene 655770 657620 1 + . ID=LTnewLM_220021400 LTnewLM_22 AUGUSTUS mRNA 655770 657620 1 + . ID=LTnewLM_220021400.1;Parent=LTnewLM_220021400 LTnewLM_22 AUGUSTUS CDS 655770 657620 1 + 0 ID=LTnewLM_220021400.1:CDS:1;Parent=LTnewLM_220021400.1 ### LTnewLM_22 . polypeptide 655770 657620 . + . ID=LTnewLM_220021400.1:pep;Derives_from=LTnewLM_220021400.1;orthologous_to=LmjF.22.1550_mRNA;ortholog_cluster=OG0002372;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 657861 658562 0.67 + . ID=LTnewLM_220021500 LTnewLM_22 AUGUSTUS mRNA 657861 658562 0.67 + . ID=LTnewLM_220021500.1;Parent=LTnewLM_220021500 LTnewLM_22 AUGUSTUS CDS 657861 658562 0.67 + 0 ID=LTnewLM_220021500.1:CDS:1;Parent=LTnewLM_220021500.1 ### LTnewLM_22 . polypeptide 657861 658562 . + . ID=LTnewLM_220021500.1:pep;Derives_from=LTnewLM_220021500.1;orthologous_to=LTnewLM_220021100.1,LmjF.22.1520_mRNA,LmjF.22.1560_mRNA;ortholog_cluster=OG0000168;product=term%3DRibosomal protein L14%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01929;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_22 Pfam protein_match 658176 658391 . + . Parent=LTnewLM_220021500.1:pep;Name=PF01929;signature_desc=Ribosomal protein L14;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_22 AUGUSTUS gene 661614 662594 1 + . ID=LTnewLM_220021600 LTnewLM_22 AUGUSTUS mRNA 661614 662594 1 + . ID=LTnewLM_220021600.1;Parent=LTnewLM_220021600 LTnewLM_22 AUGUSTUS CDS 661614 662594 1 + 0 ID=LTnewLM_220021600.1:CDS:1;Parent=LTnewLM_220021600.1 ### LTnewLM_22 . polypeptide 661614 662594 . + . ID=LTnewLM_220021600.1:pep;Derives_from=LTnewLM_220021600.1;product=term%3Dhypothetical protein ### LTnewLM_22 Liftoff gene 667603 668736 . + . ID=LTnewLM_220021700;coverage=0.994;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.22.1570_0 LTnewLM_22 Liftoff mRNA 667603 668736 . + . ID=LTnewLM_220021700.1;Parent=LTnewLM_220021700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_22 Liftoff CDS 667603 668736 . + 0 ID=LTnewLM_220021700.1:CDS:1;Parent=LTnewLM_220021700.1;extra_copy_number=0 ### LTnewLM_22 . polypeptide 667603 668736 . + . ID=LTnewLM_220021700.1:pep;Derives_from=LTnewLM_220021700.1;orthologous_to=LmjF.22.1570_mRNA;ortholog_cluster=OG0002373;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 669532 670623 1 + . ID=LTnewLM_220021800 LTnewLM_22 AUGUSTUS mRNA 669532 670623 1 + . ID=LTnewLM_220021800.1;Parent=LTnewLM_220021800 LTnewLM_22 AUGUSTUS CDS 669532 670623 1 + 0 ID=LTnewLM_220021800.1:CDS:1;Parent=LTnewLM_220021800.1 ### LTnewLM_22 . polypeptide 669532 670623 . + . ID=LTnewLM_220021800.1:pep;Derives_from=LTnewLM_220021800.1;orthologous_to=LmjF.22.1580_mRNA;ortholog_cluster=OG0002374;product=term%3D3' exoribonuclease family%2C domain 1/3' exoribonuclease family%2C domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01138|Pfam:PF03725 LTnewLM_22 Pfam protein_match 669697 670032 . + . Parent=LTnewLM_220021800.1:pep;Name=PF01138;signature_desc=3' exoribonuclease family%2C domain 1 LTnewLM_22 Pfam protein_match 670288 670443 . + . Parent=LTnewLM_220021800.1:pep;Name=PF03725;signature_desc=3' exoribonuclease family%2C domain 2 ### LTnewLM_22 AUGUSTUS gene 671598 676226 1 + . ID=LTnewLM_220021900 LTnewLM_22 AUGUSTUS mRNA 671598 676226 1 + . ID=LTnewLM_220021900.1;Parent=LTnewLM_220021900 LTnewLM_22 AUGUSTUS CDS 671598 676226 1 + 0 ID=LTnewLM_220021900.1:CDS:1;Parent=LTnewLM_220021900.1 ### LTnewLM_22 . polypeptide 671598 676226 . + . ID=LTnewLM_220021900.1:pep;Derives_from=LTnewLM_220021900.1;orthologous_to=LmjF.22.1590_mRNA;ortholog_cluster=OG0002375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 678859 681294 1 + . ID=LTnewLM_220022000 LTnewLM_22 AUGUSTUS mRNA 678859 681294 1 + . ID=LTnewLM_220022000.1;Parent=LTnewLM_220022000 LTnewLM_22 AUGUSTUS CDS 678859 681294 1 + 0 ID=LTnewLM_220022000.1:CDS:1;Parent=LTnewLM_220022000.1 ### LTnewLM_22 . polypeptide 678859 681294 . + . ID=LTnewLM_220022000.1:pep;Derives_from=LTnewLM_220022000.1;orthologous_to=LmjF.22.1600_mRNA;ortholog_cluster=OG0002376;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_22 Pfam protein_match 679873 680271 . + . Parent=LTnewLM_220022000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_22 AUGUSTUS gene 685888 688062 1 + . ID=LTnewLM_220022100 LTnewLM_22 AUGUSTUS mRNA 685888 688062 1 + . ID=LTnewLM_220022100.1;Parent=LTnewLM_220022100 LTnewLM_22 AUGUSTUS CDS 685888 688062 1 + 0 ID=LTnewLM_220022100.1:CDS:1;Parent=LTnewLM_220022100.1 ### LTnewLM_22 . polypeptide 685888 688062 . + . ID=LTnewLM_220022100.1:pep;Derives_from=LTnewLM_220022100.1;orthologous_to=LmjF.22.1610_mRNA;ortholog_cluster=OG0002377;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 689976 698366 1 + . ID=LTnewLM_220022200 LTnewLM_22 AUGUSTUS mRNA 689976 698366 1 + . ID=LTnewLM_220022200.1;Parent=LTnewLM_220022200 LTnewLM_22 AUGUSTUS CDS 689976 698366 1 + 0 ID=LTnewLM_220022200.1:CDS:1;Parent=LTnewLM_220022200.1 ### LTnewLM_22 . polypeptide 689976 698366 . + . ID=LTnewLM_220022200.1:pep;Derives_from=LTnewLM_220022200.1;orthologous_to=LmjF.22.1620_mRNA;ortholog_cluster=OG0002378;product=term%3DAbnormal spindle-like microcephaly-assoc'd%2C ASPM-SPD-2-Hydin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15780 LTnewLM_22 Pfam protein_match 691164 691400 . + . Parent=LTnewLM_220022200.1:pep;Name=PF15780;signature_desc=Abnormal spindle-like microcephaly-assoc'd%2C ASPM-SPD-2-Hydin ### LTnewLM_22 AUGUSTUS gene 700098 701114 1 + . ID=LTnewLM_220022300 LTnewLM_22 AUGUSTUS mRNA 700098 701114 1 + . ID=LTnewLM_220022300.1;Parent=LTnewLM_220022300 LTnewLM_22 AUGUSTUS CDS 700098 701114 1 + 0 ID=LTnewLM_220022300.1:CDS:1;Parent=LTnewLM_220022300.1 ### LTnewLM_22 . polypeptide 700098 701114 . + . ID=LTnewLM_220022300.1:pep;Derives_from=LTnewLM_220022300.1;orthologous_to=LmjF.22.1630_mRNA;ortholog_cluster=OG0002379;product=term%3DCAF1 family ribonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04857;Ontology_term=GO:0005634 LTnewLM_22 Pfam protein_match 700206 700556 . + . Parent=LTnewLM_220022300.1:pep;Name=PF04857;signature_desc=CAF1 family ribonuclease;Ontology_term=GO:0005634 LTnewLM_22 Pfam protein_match 700617 700826 . + . Parent=LTnewLM_220022300.1:pep;Name=PF04857;signature_desc=CAF1 family ribonuclease;Ontology_term=GO:0005634 ### LTnewLM_22 AUGUSTUS gene 702560 702871 1 + . ID=LTnewLM_220022400 LTnewLM_22 AUGUSTUS mRNA 702560 702871 1 + . ID=LTnewLM_220022400.1;Parent=LTnewLM_220022400 LTnewLM_22 AUGUSTUS CDS 702560 702871 1 + 0 ID=LTnewLM_220022400.1:CDS:1;Parent=LTnewLM_220022400.1 ### LTnewLM_22 . polypeptide 702560 702871 . + . ID=LTnewLM_220022400.1:pep;Derives_from=LTnewLM_220022400.1;orthologous_to=LmjF.22.1640_mRNA;ortholog_cluster=OG0002380;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 703984 705144 1 + . ID=LTnewLM_220022500 LTnewLM_22 AUGUSTUS mRNA 703984 705144 1 + . ID=LTnewLM_220022500.1;Parent=LTnewLM_220022500 LTnewLM_22 AUGUSTUS CDS 703984 705144 1 + 0 ID=LTnewLM_220022500.1:CDS:1;Parent=LTnewLM_220022500.1 ### LTnewLM_22 . polypeptide 703984 705144 . + . ID=LTnewLM_220022500.1:pep;Derives_from=LTnewLM_220022500.1;orthologous_to=LmjF.22.1650_mRNA;ortholog_cluster=OG0002381;product=term%3DCobW/HypB/UreG%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02492 LTnewLM_22 Pfam protein_match 704005 704559 . + . Parent=LTnewLM_220022500.1:pep;Name=PF02492;signature_desc=CobW/HypB/UreG%2C nucleotide-binding domain ### LTnewLM_22 AUGUSTUS gene 705883 707733 1 + . ID=LTnewLM_220022600 LTnewLM_22 AUGUSTUS mRNA 705883 707733 1 + . ID=LTnewLM_220022600.1;Parent=LTnewLM_220022600 LTnewLM_22 AUGUSTUS CDS 705883 707733 1 + 0 ID=LTnewLM_220022600.1:CDS:1;Parent=LTnewLM_220022600.1 ### LTnewLM_22 . polypeptide 705883 707733 . + . ID=LTnewLM_220022600.1:pep;Derives_from=LTnewLM_220022600.1;orthologous_to=LmjF.22.1660_mRNA;ortholog_cluster=OG0002382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 708016 709329 0.42 + . ID=LTnewLM_220022700 LTnewLM_22 AUGUSTUS mRNA 708016 709329 0.42 + . ID=LTnewLM_220022700.1;Parent=LTnewLM_220022700 LTnewLM_22 AUGUSTUS CDS 708016 708131 0.42 + 0 ID=LTnewLM_220022700.1:CDS:1;Parent=LTnewLM_220022700.1 LTnewLM_22 AUGUSTUS CDS 708972 709329 0.92 + 1 ID=LTnewLM_220022700.1:CDS:2;Parent=LTnewLM_220022700.1 ### LTnewLM_22 . polypeptide 708016 709329 . + . ID=LTnewLM_220022700.1:pep;Derives_from=LTnewLM_220022700.1;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_22 Pfam protein_match 708187 708432 . + . Parent=LTnewLM_220022700.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_22 AUGUSTUS gene 710587 713346 1 + . ID=LTnewLM_220022800 LTnewLM_22 AUGUSTUS mRNA 710587 713346 1 + . ID=LTnewLM_220022800.1;Parent=LTnewLM_220022800 LTnewLM_22 AUGUSTUS CDS 710587 713346 1 + 0 ID=LTnewLM_220022800.1:CDS:1;Parent=LTnewLM_220022800.1 ### LTnewLM_22 . polypeptide 710587 713346 . + . ID=LTnewLM_220022800.1:pep;Derives_from=LTnewLM_220022800.1;orthologous_to=LmjF.22.1670_mRNA;ortholog_cluster=OG0002383;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 713952 716087 1 + . ID=LTnewLM_220022900 LTnewLM_22 AUGUSTUS mRNA 713952 716087 1 + . ID=LTnewLM_220022900.1;Parent=LTnewLM_220022900 LTnewLM_22 AUGUSTUS CDS 713952 716087 1 + 0 ID=LTnewLM_220022900.1:CDS:1;Parent=LTnewLM_220022900.1 ### LTnewLM_22 . polypeptide 713952 716087 . + . ID=LTnewLM_220022900.1:pep;Derives_from=LTnewLM_220022900.1;orthologous_to=LTnewLM_300036900.1,LmjF.30.2950_mRNA;ortholog_cluster=OG0000386;product=term%3DEF-hand domain pair/Phosphatidylinositol-specific phospholipase C%2C X domain/Phosphatidylinositol-specific phospholipase C%2C Y domain/C2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499|Pfam:PF00388|Pfam:PF00387|Pfam:PF00168;Ontology_term=GO:0006629,GO:0005515,GO:0007165,GO:0004435,GO:0035556 LTnewLM_22 Pfam protein_match 714249 714425 . + . Parent=LTnewLM_220022900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_22 Pfam protein_match 714696 715127 . + . Parent=LTnewLM_220022900.1:pep;Name=PF00388;signature_desc=Phosphatidylinositol-specific phospholipase C%2C X domain LTnewLM_22 Pfam protein_match 715296 715628 . + . Parent=LTnewLM_220022900.1:pep;Name=PF00387;signature_desc=Phosphatidylinositol-specific phospholipase C%2C Y domain;Ontology_term=GO:0004435,GO:0006629,GO:0007165,GO:0035556 LTnewLM_22 Pfam protein_match 715686 715982 . + . Parent=LTnewLM_220022900.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_22 AUGUSTUS gene 725338 725952 0.89 + . ID=LTnewLM_220023000 LTnewLM_22 AUGUSTUS mRNA 725338 725952 0.89 + . ID=LTnewLM_220023000.1;Parent=LTnewLM_220023000 LTnewLM_22 AUGUSTUS CDS 725338 725952 0.89 + 0 ID=LTnewLM_220023000.1:CDS:1;Parent=LTnewLM_220023000.1 ### LTnewLM_22 . polypeptide 725338 725952 . + . ID=LTnewLM_220023000.1:pep;Derives_from=LTnewLM_220023000.1;orthologous_to=LTnewLM_020013200.1,LTnewLM_190022800.1,LmjF.05.1225_mRNA;ortholog_cluster=OG0000142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 726004 727332 0.94 + . ID=LTnewLM_220023100 LTnewLM_22 AUGUSTUS mRNA 726004 727332 0.94 + . ID=LTnewLM_220023100.1;Parent=LTnewLM_220023100 LTnewLM_22 AUGUSTUS CDS 726004 727332 0.94 + 0 ID=LTnewLM_220023100.1:CDS:1;Parent=LTnewLM_220023100.1 ### LTnewLM_22 . polypeptide 726004 727332 . + . ID=LTnewLM_220023100.1:pep;Derives_from=LTnewLM_220023100.1;orthologous_to=LTnewLM_190022900.1,LTnewLM_190023000.1,LTnewLM_220023200.1,LTnewLM_220023400.1,LTnewLM_220023600.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 729265 729600 0.86 + . ID=LTnewLM_220023200 LTnewLM_22 AUGUSTUS mRNA 729265 729600 0.86 + . ID=LTnewLM_220023200.1;Parent=LTnewLM_220023200 LTnewLM_22 AUGUSTUS CDS 729265 729600 0.86 + 0 ID=LTnewLM_220023200.1:CDS:1;Parent=LTnewLM_220023200.1 ### LTnewLM_22 . polypeptide 729265 729600 . + . ID=LTnewLM_220023200.1:pep;Derives_from=LTnewLM_220023200.1;orthologous_to=LTnewLM_190022900.1,LTnewLM_190023000.1,LTnewLM_220023100.1,LTnewLM_220023400.1,LTnewLM_220023600.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 729716 730174 1 - . ID=LTnewLM_220023300 LTnewLM_22 AUGUSTUS mRNA 729716 730174 1 - . ID=LTnewLM_220023300.1;Parent=LTnewLM_220023300 LTnewLM_22 AUGUSTUS CDS 729716 730174 1 - 0 ID=LTnewLM_220023300.1:CDS:1;Parent=LTnewLM_220023300.1 ### LTnewLM_22 . polypeptide 729716 730174 . - . ID=LTnewLM_220023300.1:pep;Derives_from=LTnewLM_220023300.1;orthologous_to=LTnewLM_220023500.1;ortholog_cluster=OG0002384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 730221 730753 1 + . ID=LTnewLM_220023400 LTnewLM_22 AUGUSTUS mRNA 730221 730753 1 + . ID=LTnewLM_220023400.1;Parent=LTnewLM_220023400 LTnewLM_22 AUGUSTUS CDS 730221 730472 1 + 0 ID=LTnewLM_220023400.1:CDS:1;Parent=LTnewLM_220023400.1 LTnewLM_22 AUGUSTUS CDS 730535 730753 1 + 0 ID=LTnewLM_220023400.1:CDS:2;Parent=LTnewLM_220023400.1 ### LTnewLM_22 . polypeptide 730221 730753 . + . ID=LTnewLM_220023400.1:pep;Derives_from=LTnewLM_220023400.1;orthologous_to=LTnewLM_190022900.1,LTnewLM_190023000.1,LTnewLM_220023100.1,LTnewLM_220023200.1,LTnewLM_220023600.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 730798 731298 0.94 - . ID=LTnewLM_220023500 LTnewLM_22 AUGUSTUS mRNA 730798 731298 0.94 - . ID=LTnewLM_220023500.1;Parent=LTnewLM_220023500 LTnewLM_22 AUGUSTUS CDS 730798 731298 0.94 - 0 ID=LTnewLM_220023500.1:CDS:1;Parent=LTnewLM_220023500.1 ### LTnewLM_22 . polypeptide 730798 731298 . - . ID=LTnewLM_220023500.1:pep;Derives_from=LTnewLM_220023500.1;orthologous_to=LTnewLM_220023300.1;ortholog_cluster=OG0002384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_22 AUGUSTUS gene 731563 732326 0.64 + . ID=LTnewLM_220023600 LTnewLM_22 AUGUSTUS mRNA 731563 732326 0.64 + . ID=LTnewLM_220023600.1;Parent=LTnewLM_220023600 LTnewLM_22 AUGUSTUS CDS 731563 731565 0.64 + 0 ID=LTnewLM_220023600.1:CDS:1;Parent=LTnewLM_220023600.1 LTnewLM_22 AUGUSTUS CDS 731727 732326 1 + 0 ID=LTnewLM_220023600.1:CDS:2;Parent=LTnewLM_220023600.1 ### LTnewLM_22 . polypeptide 731563 732326 . + . ID=LTnewLM_220023600.1:pep;Derives_from=LTnewLM_220023600.1;orthologous_to=LTnewLM_190022900.1,LTnewLM_190023000.1,LTnewLM_220023100.1,LTnewLM_220023200.1,LTnewLM_220023400.1;ortholog_cluster=OG0000059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 1 477 0.75 + . ID=LTnewLM_230005000;fiveEndPartial=true;Start_range=.,. LTnewLM_23 AUGUSTUS mRNA 1 477 0.75 + . ID=LTnewLM_230005000.1;Parent=LTnewLM_230005000 LTnewLM_23 AUGUSTUS CDS 266 477 0.75 + 2 ID=LTnewLM_230005000.1:CDS:1;Parent=LTnewLM_230005000.1 ### LTnewLM_23 . contig 1 769666 . + . Name=LTnewLM_CTG000023 LTnewLM_23 . polypeptide 266 477 . + . ID=LTnewLM_230005000.1:pep;Derives_from=LTnewLM_230005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 2697 4538 0.61 + . ID=LTnewLM_230005100 LTnewLM_23 AUGUSTUS mRNA 2697 4538 0.61 + . ID=LTnewLM_230005100.1;Parent=LTnewLM_230005100 LTnewLM_23 AUGUSTUS CDS 2697 3699 0.61 + 0 ID=LTnewLM_230005100.1:CDS:1;Parent=LTnewLM_230005100.1 LTnewLM_23 AUGUSTUS CDS 4414 4538 0.76 + 2 ID=LTnewLM_230005100.1:CDS:2;Parent=LTnewLM_230005100.1 ### LTnewLM_23 . polypeptide 2697 4538 . + . ID=LTnewLM_230005100.1:pep;Derives_from=LTnewLM_230005100.1;orthologous_to=LmjF.23.0010_mRNA;ortholog_cluster=OG0002385;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 6158 7459 1 + . ID=LTnewLM_230005200 LTnewLM_23 AUGUSTUS mRNA 6158 7459 1 + . ID=LTnewLM_230005200.1;Parent=LTnewLM_230005200 LTnewLM_23 AUGUSTUS CDS 6158 7459 1 + 0 ID=LTnewLM_230005200.1:CDS:1;Parent=LTnewLM_230005200.1 ### LTnewLM_23 . polypeptide 6158 7459 . + . ID=LTnewLM_230005200.1:pep;Derives_from=LTnewLM_230005200.1;orthologous_to=LmjF.23.0020_mRNA;ortholog_cluster=OG0002386;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 8111 8989 1 + . ID=LTnewLM_230005300 LTnewLM_23 AUGUSTUS mRNA 8111 8989 1 + . ID=LTnewLM_230005300.1;Parent=LTnewLM_230005300 LTnewLM_23 AUGUSTUS CDS 8111 8989 1 + 0 ID=LTnewLM_230005300.1:CDS:1;Parent=LTnewLM_230005300.1 ### LTnewLM_23 . polypeptide 8111 8989 . + . ID=LTnewLM_230005300.1:pep;Derives_from=LTnewLM_230005300.1;orthologous_to=LmjF.23.0025_mRNA;ortholog_cluster=OG0002387;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 9352 10785 1 + . ID=LTnewLM_230005400 LTnewLM_23 AUGUSTUS mRNA 9352 10785 1 + . ID=LTnewLM_230005400.1;Parent=LTnewLM_230005400 LTnewLM_23 AUGUSTUS CDS 9352 10785 1 + 0 ID=LTnewLM_230005400.1:CDS:1;Parent=LTnewLM_230005400.1 ### LTnewLM_23 . polypeptide 9352 10785 . + . ID=LTnewLM_230005400.1:pep;Derives_from=LTnewLM_230005400.1;orthologous_to=LmjF.23.0030_mRNA;ortholog_cluster=OG0002388;product=term%3DWD domain%2C G-beta repeat/UTP15 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF09384;Ontology_term=GO:0006364,GO:0005515,GO:0005730 LTnewLM_23 Pfam protein_match 9685 9780 . + . Parent=LTnewLM_230005400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 9820 9903 . + . Parent=LTnewLM_230005400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 10381 10767 . + . Parent=LTnewLM_230005400.1:pep;Name=PF09384;signature_desc=UTP15 C terminal;Ontology_term=GO:0006364,GO:0005730 ### LTnewLM_23 AUGUSTUS gene 11570 12250 1 + . ID=LTnewLM_230005500 LTnewLM_23 AUGUSTUS mRNA 11570 12250 1 + . ID=LTnewLM_230005500.1;Parent=LTnewLM_230005500 LTnewLM_23 AUGUSTUS CDS 11570 12250 1 + 0 ID=LTnewLM_230005500.1:CDS:1;Parent=LTnewLM_230005500.1 ### LTnewLM_23 . polypeptide 11570 12250 . + . ID=LTnewLM_230005500.1:pep;Derives_from=LTnewLM_230005500.1;orthologous_to=LmjF.23.0040_mRNA;ortholog_cluster=OG0002389;product=term%3DAhpC/TSA family/Redoxin/C-terminal domain of 1-Cys peroxiredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF10417;Ontology_term=GO:0055114,GO:0016209,GO:0051920,GO:0016491 LTnewLM_23 Pfam protein_match 11681 12076 . + . Parent=LTnewLM_230005500.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 LTnewLM_23 Pfam protein_match 11690 12124 . + . Parent=LTnewLM_230005500.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_23 Pfam protein_match 12140 12214 . + . Parent=LTnewLM_230005500.1:pep;Name=PF10417;signature_desc=C-terminal domain of 1-Cys peroxiredoxin;Ontology_term=GO:0051920,GO:0055114 ### LTnewLM_23 AUGUSTUS gene 13066 13956 1 + . ID=LTnewLM_230005600 LTnewLM_23 AUGUSTUS mRNA 13066 13956 1 + . ID=LTnewLM_230005600.1;Parent=LTnewLM_230005600 LTnewLM_23 AUGUSTUS CDS 13066 13956 1 + 0 ID=LTnewLM_230005600.1:CDS:1;Parent=LTnewLM_230005600.1 ### LTnewLM_23 . polypeptide 13066 13956 . + . ID=LTnewLM_230005600.1:pep;Derives_from=LTnewLM_230005600.1;orthologous_to=LmjF.23.0050_mRNA;ortholog_cluster=OG0002390;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_23 Pfam protein_match 13147 13638 . + . Parent=LTnewLM_230005600.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_23 AUGUSTUS gene 14531 15052 1 + . ID=LTnewLM_230005700 LTnewLM_23 AUGUSTUS mRNA 14531 15052 1 + . ID=LTnewLM_230005700.1;Parent=LTnewLM_230005700 LTnewLM_23 AUGUSTUS CDS 14531 15052 1 + 0 ID=LTnewLM_230005700.1:CDS:1;Parent=LTnewLM_230005700.1 ### LTnewLM_23 . polypeptide 14531 15052 . + . ID=LTnewLM_230005700.1:pep;Derives_from=LTnewLM_230005700.1;orthologous_to=LmjF.23.0060_mRNA;ortholog_cluster=OG0002391;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 15559 16557 1 + . ID=LTnewLM_230005800 LTnewLM_23 AUGUSTUS mRNA 15559 16557 1 + . ID=LTnewLM_230005800.1;Parent=LTnewLM_230005800 LTnewLM_23 AUGUSTUS CDS 15559 16557 1 + 0 ID=LTnewLM_230005800.1:CDS:1;Parent=LTnewLM_230005800.1 ### LTnewLM_23 . polypeptide 15559 16557 . + . ID=LTnewLM_230005800.1:pep;Derives_from=LTnewLM_230005800.1;orthologous_to=LmjF.23.0070_mRNA;ortholog_cluster=OG0002392;product=term%3DArginase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00491;Ontology_term=GO:0046872 LTnewLM_23 Pfam protein_match 15844 16389 . + . Parent=LTnewLM_230005800.1:pep;Name=PF00491;signature_desc=Arginase family;Ontology_term=GO:0046872 ### LTnewLM_23 AUGUSTUS gene 17133 18392 1 + . ID=LTnewLM_230005900 LTnewLM_23 AUGUSTUS mRNA 17133 18392 1 + . ID=LTnewLM_230005900.1;Parent=LTnewLM_230005900 LTnewLM_23 AUGUSTUS CDS 17133 18392 1 + 0 ID=LTnewLM_230005900.1:CDS:1;Parent=LTnewLM_230005900.1 ### LTnewLM_23 . polypeptide 17133 18392 . + . ID=LTnewLM_230005900.1:pep;Derives_from=LTnewLM_230005900.1;orthologous_to=LmjF.23.0080_mRNA;ortholog_cluster=OG0002393;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 19938 20978 1 + . ID=LTnewLM_230006000 LTnewLM_23 AUGUSTUS mRNA 19938 20978 1 + . ID=LTnewLM_230006000.1;Parent=LTnewLM_230006000 LTnewLM_23 AUGUSTUS CDS 19938 20978 1 + 0 ID=LTnewLM_230006000.1:CDS:1;Parent=LTnewLM_230006000.1 ### LTnewLM_23 . polypeptide 19938 20978 . + . ID=LTnewLM_230006000.1:pep;Derives_from=LTnewLM_230006000.1;orthologous_to=LmjF.23.0090_mRNA;ortholog_cluster=OG0002394;product=term%3DRecQ mediated genome instability protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08585 LTnewLM_23 Pfam protein_match 19965 20465 . + . Parent=LTnewLM_230006000.1:pep;Name=PF08585;signature_desc=RecQ mediated genome instability protein ### LTnewLM_23 AUGUSTUS gene 21820 22602 1 + . ID=LTnewLM_230006100 LTnewLM_23 AUGUSTUS mRNA 21820 22602 1 + . ID=LTnewLM_230006100.1;Parent=LTnewLM_230006100 LTnewLM_23 AUGUSTUS CDS 21820 22602 1 + 0 ID=LTnewLM_230006100.1:CDS:1;Parent=LTnewLM_230006100.1 ### LTnewLM_23 . polypeptide 21820 22602 . + . ID=LTnewLM_230006100.1:pep;Derives_from=LTnewLM_230006100.1;orthologous_to=LmjF.23.0100_mRNA;ortholog_cluster=OG0002395;product=term%3DLysine methyltransferase/Methyltransferase small domain/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294|Pfam:PF05175|Pfam:PF13847|Pfam:PF13649|Pfam:PF08242;Ontology_term=GO:0008168 LTnewLM_23 Pfam protein_match 22048 22413 . + . Parent=LTnewLM_230006100.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase LTnewLM_23 Pfam protein_match 22129 22284 . + . Parent=LTnewLM_230006100.1:pep;Name=PF05175;signature_desc=Methyltransferase small domain;Ontology_term=GO:0008168 LTnewLM_23 Pfam protein_match 22129 22428 . + . Parent=LTnewLM_230006100.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_23 Pfam protein_match 22138 22434 . + . Parent=LTnewLM_230006100.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_23 Pfam protein_match 22141 22434 . + . Parent=LTnewLM_230006100.1:pep;Name=PF08242;signature_desc=Methyltransferase domain ### LTnewLM_23 AUGUSTUS gene 23959 25098 1 + . ID=LTnewLM_230006200 LTnewLM_23 AUGUSTUS mRNA 23959 25098 1 + . ID=LTnewLM_230006200.1;Parent=LTnewLM_230006200 LTnewLM_23 AUGUSTUS CDS 23959 25098 1 + 0 ID=LTnewLM_230006200.1:CDS:1;Parent=LTnewLM_230006200.1 ### LTnewLM_23 . polypeptide 23959 25098 . + . ID=LTnewLM_230006200.1:pep;Derives_from=LTnewLM_230006200.1;orthologous_to=LmjF.23.0110_mRNA;ortholog_cluster=OG0002396;product=term%3DMobA-like NTP transferase domain/Nucleotidyl transferase/Bacterial transferase hexapeptide (six repeats)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12804|Pfam:PF00483|Pfam:PF00132;Ontology_term=GO:0016779,GO:0009058 LTnewLM_23 Pfam protein_match 23989 24366 . + . Parent=LTnewLM_230006200.1:pep;Name=PF12804;signature_desc=MobA-like NTP transferase domain LTnewLM_23 Pfam protein_match 23989 24657 . + . Parent=LTnewLM_230006200.1:pep;Name=PF00483;signature_desc=Nucleotidyl transferase;Ontology_term=GO:0016779,GO:0009058 LTnewLM_23 Pfam protein_match 24790 24870 . + . Parent=LTnewLM_230006200.1:pep;Name=PF00132;signature_desc=Bacterial transferase hexapeptide (six repeats) ### LTnewLM_23 AUGUSTUS gene 28302 37427 1 + . ID=LTnewLM_230006300 LTnewLM_23 AUGUSTUS mRNA 28302 37427 1 + . ID=LTnewLM_230006300.1;Parent=LTnewLM_230006300 LTnewLM_23 AUGUSTUS CDS 28302 37427 1 + 0 ID=LTnewLM_230006300.1:CDS:1;Parent=LTnewLM_230006300.1 ### LTnewLM_23 . polypeptide 28302 37427 . + . ID=LTnewLM_230006300.1:pep;Derives_from=LTnewLM_230006300.1;orthologous_to=LmjF.23.0120_mRNA;ortholog_cluster=OG0002397;product=term%3DBeige/BEACH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02138 LTnewLM_23 Pfam protein_match 35514 36359 . + . Parent=LTnewLM_230006300.1:pep;Name=PF02138;signature_desc=Beige/BEACH domain ### LTnewLM_23 AUGUSTUS gene 44514 45092 1 + . ID=LTnewLM_230006400 LTnewLM_23 AUGUSTUS mRNA 44514 45092 1 + . ID=LTnewLM_230006400.1;Parent=LTnewLM_230006400 LTnewLM_23 AUGUSTUS CDS 44514 45092 1 + 0 ID=LTnewLM_230006400.1:CDS:1;Parent=LTnewLM_230006400.1 ### LTnewLM_23 . polypeptide 44514 45092 . + . ID=LTnewLM_230006400.1:pep;Derives_from=LTnewLM_230006400.1;orthologous_to=LmjF.23.0125_mRNA;ortholog_cluster=OG0002398;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_23 Pfam protein_match 44538 44975 . + . Parent=LTnewLM_230006400.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_23 AUGUSTUS gene 45718 46221 1 + . ID=LTnewLM_230006500 LTnewLM_23 AUGUSTUS mRNA 45718 46221 1 + . ID=LTnewLM_230006500.1;Parent=LTnewLM_230006500 LTnewLM_23 AUGUSTUS CDS 45718 46221 1 + 0 ID=LTnewLM_230006500.1:CDS:1;Parent=LTnewLM_230006500.1 ### LTnewLM_23 . polypeptide 45718 46221 . + . ID=LTnewLM_230006500.1:pep;Derives_from=LTnewLM_230006500.1;orthologous_to=LmjF.23.0130_mRNA;ortholog_cluster=OG0002399;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_23 Pfam protein_match 45766 45942 . + . Parent=LTnewLM_230006500.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 LTnewLM_23 Pfam protein_match 45997 46173 . + . Parent=LTnewLM_230006500.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_23 AUGUSTUS gene 48243 49475 1 + . ID=LTnewLM_230006600 LTnewLM_23 AUGUSTUS mRNA 48243 49475 1 + . ID=LTnewLM_230006600.1;Parent=LTnewLM_230006600 LTnewLM_23 AUGUSTUS CDS 48243 49475 1 + 0 ID=LTnewLM_230006600.1:CDS:1;Parent=LTnewLM_230006600.1 ### LTnewLM_23 . polypeptide 48243 49475 . + . ID=LTnewLM_230006600.1:pep;Derives_from=LTnewLM_230006600.1;orthologous_to=LmjF.23.0140_mRNA;ortholog_cluster=OG0002400;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561|Pfam:PF12697 LTnewLM_23 Pfam protein_match 48603 48971 . + . Parent=LTnewLM_230006600.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_23 Pfam protein_match 48609 48920 . + . Parent=LTnewLM_230006600.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_23 Pfam protein_match 48612 49394 . + . Parent=LTnewLM_230006600.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_23 AUGUSTUS gene 52821 53921 1 + . ID=LTnewLM_230006700 LTnewLM_23 AUGUSTUS mRNA 52821 53921 1 + . ID=LTnewLM_230006700.1;Parent=LTnewLM_230006700 LTnewLM_23 AUGUSTUS CDS 52821 53921 1 + 0 ID=LTnewLM_230006700.1:CDS:1;Parent=LTnewLM_230006700.1 ### LTnewLM_23 . polypeptide 52821 53921 . + . ID=LTnewLM_230006700.1:pep;Derives_from=LTnewLM_230006700.1;orthologous_to=LmjF.23.0150_mRNA;ortholog_cluster=OG0002401;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_23 Pfam protein_match 53616 53663 . + . Parent=LTnewLM_230006700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_23 AUGUSTUS gene 54638 56218 1 + . ID=LTnewLM_230006800 LTnewLM_23 AUGUSTUS mRNA 54638 56218 1 + . ID=LTnewLM_230006800.1;Parent=LTnewLM_230006800 LTnewLM_23 AUGUSTUS CDS 54638 56218 1 + 0 ID=LTnewLM_230006800.1:CDS:1;Parent=LTnewLM_230006800.1 ### LTnewLM_23 . polypeptide 54638 56218 . + . ID=LTnewLM_230006800.1:pep;Derives_from=LTnewLM_230006800.1;orthologous_to=LmjF.23.0160_mRNA;ortholog_cluster=OG0002402;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 57036 57719 1 + . ID=LTnewLM_230006900 LTnewLM_23 AUGUSTUS mRNA 57036 57719 1 + . ID=LTnewLM_230006900.1;Parent=LTnewLM_230006900 LTnewLM_23 AUGUSTUS CDS 57036 57719 1 + 0 ID=LTnewLM_230006900.1:CDS:1;Parent=LTnewLM_230006900.1 ### LTnewLM_23 . polypeptide 57036 57719 . + . ID=LTnewLM_230006900.1:pep;Derives_from=LTnewLM_230006900.1;orthologous_to=LmjF.23.0170_mRNA;ortholog_cluster=OG0002403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 58362 59252 1 + . ID=LTnewLM_230007000 LTnewLM_23 AUGUSTUS mRNA 58362 59252 1 + . ID=LTnewLM_230007000.1;Parent=LTnewLM_230007000 LTnewLM_23 AUGUSTUS CDS 58362 59252 1 + 0 ID=LTnewLM_230007000.1:CDS:1;Parent=LTnewLM_230007000.1 ### LTnewLM_23 . polypeptide 58362 59252 . + . ID=LTnewLM_230007000.1:pep;Derives_from=LTnewLM_230007000.1;orthologous_to=LmjF.23.0180_mRNA;ortholog_cluster=OG0002404;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 62486 62863 1 + . ID=LTnewLM_230007100 LTnewLM_23 AUGUSTUS mRNA 62486 62863 1 + . ID=LTnewLM_230007100.1;Parent=LTnewLM_230007100 LTnewLM_23 AUGUSTUS CDS 62486 62863 1 + 0 ID=LTnewLM_230007100.1:CDS:1;Parent=LTnewLM_230007100.1 ### LTnewLM_23 . polypeptide 62486 62863 . + . ID=LTnewLM_230007100.1:pep;Derives_from=LTnewLM_230007100.1;orthologous_to=LmjF.23.0190_mRNA;ortholog_cluster=OG0002405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 64592 65083 1 + . ID=LTnewLM_230007200 LTnewLM_23 AUGUSTUS mRNA 64592 65083 1 + . ID=LTnewLM_230007200.1;Parent=LTnewLM_230007200 LTnewLM_23 AUGUSTUS CDS 64592 65083 1 + 0 ID=LTnewLM_230007200.1:CDS:1;Parent=LTnewLM_230007200.1 ### LTnewLM_23 . polypeptide 64592 65083 . + . ID=LTnewLM_230007200.1:pep;Derives_from=LTnewLM_230007200.1;orthologous_to=LmjF.23.0200_mRNA;ortholog_cluster=OG0002406;product=term%3DYjgF/chorismate_mutase-like%2C putative endoribonuclease/Endoribonuclease L-PSP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14588|Pfam:PF01042 LTnewLM_23 Pfam protein_match 64607 65035 . + . Parent=LTnewLM_230007200.1:pep;Name=PF14588;signature_desc=YjgF/chorismate_mutase-like%2C putative endoribonuclease LTnewLM_23 Pfam protein_match 64652 65041 . + . Parent=LTnewLM_230007200.1:pep;Name=PF01042;signature_desc=Endoribonuclease L-PSP ### LTnewLM_23 AUGUSTUS gene 68486 73198 1 + . ID=LTnewLM_230007300 LTnewLM_23 AUGUSTUS mRNA 68486 73198 1 + . ID=LTnewLM_230007300.1;Parent=LTnewLM_230007300 LTnewLM_23 AUGUSTUS CDS 68486 73198 1 + 0 ID=LTnewLM_230007300.1:CDS:1;Parent=LTnewLM_230007300.1 ### LTnewLM_23 . polypeptide 68486 73198 . + . ID=LTnewLM_230007300.1:pep;Derives_from=LTnewLM_230007300.1;orthologous_to=LTnewLM_230007400.2,LmjF.23.0210_mRNA,LmjF.23.0220.1_mRNA,LmjF.23.0220.2_mRNA;ortholog_cluster=OG0000088;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_23 Pfam protein_match 69233 70033 . + . Parent=LTnewLM_230007300.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 70511 70912 . + . Parent=LTnewLM_230007300.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 71378 72154 . + . Parent=LTnewLM_230007300.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 72455 72901 . + . Parent=LTnewLM_230007300.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_23 . pseudogene 74334 81300 . + . ID=LTnewLM_230007400:pseudogene;coverage=0.997;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0220_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 74334 81300 . + . ID=LTnewLM_230007400.1;Parent=LTnewLM_230007400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 75842 81300 . + . ID=LTnewLM_230007400.1:pseudogenic_exon:1;Parent=LTnewLM_230007400.1;extra_copy_number=0 LTnewLM_23 . pseudogenic_transcript 76395 81300 . + . ID=LTnewLM_230007400.2;Parent=LTnewLM_230007400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 76588 81300 . + . ID=LTnewLM_230007400.2:pseudogenic_exon:1;Parent=LTnewLM_230007400.2;extra_copy_number=0 ### LTnewLM_23 . polypeptide 75842 81300 . + . ID=LTnewLM_230007400.1:pep;Derives_from=LTnewLM_230007400.1;product=term%3Dhypothetical protein ### LTnewLM_23 . polypeptide 76588 81300 . + . ID=LTnewLM_230007400.2:pep;Derives_from=LTnewLM_230007400.2;orthologous_to=LTnewLM_230007300.1,LmjF.23.0210_mRNA,LmjF.23.0220.1_mRNA,LmjF.23.0220.2_mRNA;ortholog_cluster=OG0000088;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_23 Pfam protein_match 77368 78162 . + . Parent=LTnewLM_230007400.2:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 78640 79041 . + . Parent=LTnewLM_230007400.2:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 79537 80223 . + . Parent=LTnewLM_230007400.2:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 80593 81039 . + . Parent=LTnewLM_230007400.2:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_23 AUGUSTUS gene 83933 84391 1 + . ID=LTnewLM_230007500 LTnewLM_23 AUGUSTUS mRNA 83933 84391 1 + . ID=LTnewLM_230007500.1;Parent=LTnewLM_230007500 LTnewLM_23 AUGUSTUS CDS 83933 84391 1 + 0 ID=LTnewLM_230007500.1:CDS:1;Parent=LTnewLM_230007500.1 ### LTnewLM_23 . polypeptide 83933 84391 . + . ID=LTnewLM_230007500.1:pep;Derives_from=LTnewLM_230007500.1;orthologous_to=LmjF.23.0223_mRNA;ortholog_cluster=OG0002407;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 85148 85813 1 + . ID=LTnewLM_230007600 LTnewLM_23 AUGUSTUS mRNA 85148 85813 1 + . ID=LTnewLM_230007600.1;Parent=LTnewLM_230007600 LTnewLM_23 AUGUSTUS CDS 85148 85813 1 + 0 ID=LTnewLM_230007600.1:CDS:1;Parent=LTnewLM_230007600.1 ### LTnewLM_23 . polypeptide 85148 85813 . + . ID=LTnewLM_230007600.1:pep;Derives_from=LTnewLM_230007600.1;orthologous_to=LmjF.23.0225_mRNA;ortholog_cluster=OG0002408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 89406 89963 1 + . ID=LTnewLM_230007700 LTnewLM_23 AUGUSTUS mRNA 89406 89963 1 + . ID=LTnewLM_230007700.1;Parent=LTnewLM_230007700 LTnewLM_23 AUGUSTUS CDS 89406 89963 1 + 0 ID=LTnewLM_230007700.1:CDS:1;Parent=LTnewLM_230007700.1 ### LTnewLM_23 . polypeptide 89406 89963 . + . ID=LTnewLM_230007700.1:pep;Derives_from=LTnewLM_230007700.1;orthologous_to=LmjF.23.0230_mRNA;ortholog_cluster=OG0002409;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 90998 91567 1 + . ID=LTnewLM_230007800 LTnewLM_23 AUGUSTUS mRNA 90998 91567 1 + . ID=LTnewLM_230007800.1;Parent=LTnewLM_230007800 LTnewLM_23 AUGUSTUS CDS 90998 91567 1 + 0 ID=LTnewLM_230007800.1:CDS:1;Parent=LTnewLM_230007800.1 ### LTnewLM_23 . polypeptide 90998 91567 . + . ID=LTnewLM_230007800.1:pep;Derives_from=LTnewLM_230007800.1;orthologous_to=LmjF.23.0240_mRNA;ortholog_cluster=OG0002410;product=term%3DYip1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04893;Ontology_term=GO:0016020 LTnewLM_23 Pfam protein_match 91151 91546 . + . Parent=LTnewLM_230007800.1:pep;Name=PF04893;signature_desc=Yip1 domain;Ontology_term=GO:0016020 ### LTnewLM_23 AUGUSTUS gene 93254 97964 0.68 + . ID=LTnewLM_230007900 LTnewLM_23 AUGUSTUS mRNA 93254 97964 0.68 + . ID=LTnewLM_230007900.1;Parent=LTnewLM_230007900 LTnewLM_23 AUGUSTUS CDS 93254 95499 0.85 + 0 ID=LTnewLM_230007900.1:CDS:1;Parent=LTnewLM_230007900.1 LTnewLM_23 AUGUSTUS CDS 95609 97964 0.68 + 1 ID=LTnewLM_230007900.1:CDS:2;Parent=LTnewLM_230007900.1 ### LTnewLM_23 . polypeptide 93254 97964 . + . ID=LTnewLM_230007900.1:pep;Derives_from=LTnewLM_230007900.1;orthologous_to=LmjF.23.0250_mRNA;ortholog_cluster=OG0002411;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_23 Pfam protein_match 94043 94840 . + . Parent=LTnewLM_230007900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 95300 95485 . + . Parent=LTnewLM_230007900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 95504 95593 . + . Parent=LTnewLM_230007900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 96086 96841 . + . Parent=LTnewLM_230007900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 97151 97597 . + . Parent=LTnewLM_230007900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_23 AUGUSTUS gene 98913 100169 1 + . ID=LTnewLM_230008000 LTnewLM_23 AUGUSTUS mRNA 98913 100169 1 + . ID=LTnewLM_230008000.1;Parent=LTnewLM_230008000 LTnewLM_23 AUGUSTUS CDS 98913 100169 1 + 0 ID=LTnewLM_230008000.1:CDS:1;Parent=LTnewLM_230008000.1 ### LTnewLM_23 . polypeptide 98913 100169 . + . ID=LTnewLM_230008000.1:pep;Derives_from=LTnewLM_230008000.1;orthologous_to=LmjF.23.0260_mRNA;ortholog_cluster=OG0002412;product=term%3DArginosuccinate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00764;Ontology_term=GO:0004055,GO:0006526,GO:0005524 LTnewLM_23 Pfam protein_match 98961 100124 . + . Parent=LTnewLM_230008000.1:pep;Name=PF00764;signature_desc=Arginosuccinate synthase;Ontology_term=GO:0004055,GO:0005524,GO:0006526 ### LTnewLM_23 AUGUSTUS gene 107481 108347 1 + . ID=LTnewLM_230008100 LTnewLM_23 AUGUSTUS mRNA 107481 108347 1 + . ID=LTnewLM_230008100.1;Parent=LTnewLM_230008100 LTnewLM_23 AUGUSTUS CDS 107481 108347 1 + 0 ID=LTnewLM_230008100.1:CDS:1;Parent=LTnewLM_230008100.1 ### LTnewLM_23 . polypeptide 107481 108347 . + . ID=LTnewLM_230008100.1:pep;Derives_from=LTnewLM_230008100.1;orthologous_to=LmjF.23.0270_mRNA;ortholog_cluster=OG0002413;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_23 Pfam protein_match 107502 107690 . + . Parent=LTnewLM_230008100.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_23 Pfam protein_match 107727 108329 . + . Parent=LTnewLM_230008100.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_23 Pfam protein_match 107733 108155 . + . Parent=LTnewLM_230008100.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 ### LTnewLM_23 AUGUSTUS gene 109221 112673 1 + . ID=LTnewLM_230008200 LTnewLM_23 AUGUSTUS mRNA 109221 112673 1 + . ID=LTnewLM_230008200.1;Parent=LTnewLM_230008200 LTnewLM_23 AUGUSTUS CDS 109221 112673 1 + 0 ID=LTnewLM_230008200.1:CDS:1;Parent=LTnewLM_230008200.1 ### LTnewLM_23 . polypeptide 109221 112673 . + . ID=LTnewLM_230008200.1:pep;Derives_from=LTnewLM_230008200.1;orthologous_to=LmjF.23.0280_mRNA;ortholog_cluster=OG0002414;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00097;Ontology_term=GO:0046872 LTnewLM_23 Pfam protein_match 112302 112421 . + . Parent=LTnewLM_230008200.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_23 AUGUSTUS gene 113634 114629 1 + . ID=LTnewLM_230008300 LTnewLM_23 AUGUSTUS mRNA 113634 114629 1 + . ID=LTnewLM_230008300.1;Parent=LTnewLM_230008300 LTnewLM_23 AUGUSTUS CDS 113634 114629 1 + 0 ID=LTnewLM_230008300.1:CDS:1;Parent=LTnewLM_230008300.1 ### LTnewLM_23 . polypeptide 113634 114629 . + . ID=LTnewLM_230008300.1:pep;Derives_from=LTnewLM_230008300.1;orthologous_to=LmjF.23.0290_mRNA;ortholog_cluster=OG0002415;product=term%3DHus1-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04005;Ontology_term=GO:0000077,GO:0006281,GO:0030896 LTnewLM_23 Pfam protein_match 113634 114620 . + . Parent=LTnewLM_230008300.1:pep;Name=PF04005;signature_desc=Hus1-like protein;Ontology_term=GO:0000077,GO:0006281,GO:0030896 ### LTnewLM_23 AUGUSTUS gene 115377 116849 1 + . ID=LTnewLM_230008400 LTnewLM_23 AUGUSTUS mRNA 115377 116849 1 + . ID=LTnewLM_230008400.1;Parent=LTnewLM_230008400 LTnewLM_23 AUGUSTUS CDS 115377 116849 1 + 0 ID=LTnewLM_230008400.1:CDS:1;Parent=LTnewLM_230008400.1 ### LTnewLM_23 . polypeptide 115377 116849 . + . ID=LTnewLM_230008400.1:pep;Derives_from=LTnewLM_230008400.1;orthologous_to=LmjF.23.0300_mRNA;ortholog_cluster=OG0002416;product=term%3DtRNA synthetases class I (W and Y)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00579;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_23 Pfam protein_match 115911 116753 . + . Parent=LTnewLM_230008400.1:pep;Name=PF00579;signature_desc=tRNA synthetases class I (W and Y);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_23 . pseudogene 118254 122182 . + . ID=LTnewLM_230008500:pseudogene;coverage=0.995;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0310_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 118254 122182 . + . ID=LTnewLM_230008500.1;Parent=LTnewLM_230008500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 118254 122182 . + . ID=LTnewLM_230008500.1:pseudogenic_exon:1;Parent=LTnewLM_230008500.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 118254 122182 . + . ID=LTnewLM_230008500.1:pep;Derives_from=LTnewLM_230008500.1;orthologous_to=LmjF.23.0310_mRNA;ortholog_cluster=OG0007513;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 123644 124465 1 + . ID=LTnewLM_230008600 LTnewLM_23 AUGUSTUS mRNA 123644 124465 1 + . ID=LTnewLM_230008600.1;Parent=LTnewLM_230008600 LTnewLM_23 AUGUSTUS CDS 123644 124465 1 + 0 ID=LTnewLM_230008600.1:CDS:1;Parent=LTnewLM_230008600.1 ### LTnewLM_23 . polypeptide 123644 124465 . + . ID=LTnewLM_230008600.1:pep;Derives_from=LTnewLM_230008600.1;orthologous_to=LmjF.23.0320_mRNA;ortholog_cluster=OG0002417;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 125448 126110 1 + . ID=LTnewLM_230008700 LTnewLM_23 AUGUSTUS mRNA 125448 126110 1 + . ID=LTnewLM_230008700.1;Parent=LTnewLM_230008700 LTnewLM_23 AUGUSTUS CDS 125448 126110 1 + 0 ID=LTnewLM_230008700.1:CDS:1;Parent=LTnewLM_230008700.1 ### LTnewLM_23 . polypeptide 125448 126110 . + . ID=LTnewLM_230008700.1:pep;Derives_from=LTnewLM_230008700.1;orthologous_to=LmjF.23.0330_mRNA;ortholog_cluster=OG0002418;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 126919 127245 1 + . ID=LTnewLM_230008800 LTnewLM_23 AUGUSTUS mRNA 126919 127245 1 + . ID=LTnewLM_230008800.1;Parent=LTnewLM_230008800 LTnewLM_23 AUGUSTUS CDS 126919 127245 1 + 0 ID=LTnewLM_230008800.1:CDS:1;Parent=LTnewLM_230008800.1 ### LTnewLM_23 . polypeptide 126919 127245 . + . ID=LTnewLM_230008800.1:pep;Derives_from=LTnewLM_230008800.1;orthologous_to=LmjF.23.0340_mRNA;ortholog_cluster=OG0002419;product=term%3DVacuolar (H+)-ATPase G subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03179 LTnewLM_23 Pfam protein_match 126931 127236 . + . Parent=LTnewLM_230008800.1:pep;Name=PF03179;signature_desc=Vacuolar (H+)-ATPase G subunit ### LTnewLM_23 AUGUSTUS gene 130334 131239 1 + . ID=LTnewLM_230008900 LTnewLM_23 AUGUSTUS mRNA 130334 131239 1 + . ID=LTnewLM_230008900.1;Parent=LTnewLM_230008900 LTnewLM_23 AUGUSTUS CDS 130334 131239 1 + 0 ID=LTnewLM_230008900.1:CDS:1;Parent=LTnewLM_230008900.1 ### LTnewLM_23 . polypeptide 130334 131239 . + . ID=LTnewLM_230008900.1:pep;Derives_from=LTnewLM_230008900.1;orthologous_to=LmjF.23.0350_mRNA;ortholog_cluster=OG0002420;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 132171 133247 1 + . ID=LTnewLM_230009000 LTnewLM_23 AUGUSTUS mRNA 132171 133247 1 + . ID=LTnewLM_230009000.1;Parent=LTnewLM_230009000 LTnewLM_23 AUGUSTUS CDS 132171 133247 1 + 0 ID=LTnewLM_230009000.1:CDS:1;Parent=LTnewLM_230009000.1 ### LTnewLM_23 . polypeptide 132171 133247 . + . ID=LTnewLM_230009000.1:pep;Derives_from=LTnewLM_230009000.1;orthologous_to=LmjF.23.0355_mRNA;ortholog_cluster=OG0002421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 134025 134798 1 + . ID=LTnewLM_230009100 LTnewLM_23 AUGUSTUS mRNA 134025 134798 1 + . ID=LTnewLM_230009100.1;Parent=LTnewLM_230009100 LTnewLM_23 AUGUSTUS CDS 134025 134798 1 + 0 ID=LTnewLM_230009100.1:CDS:1;Parent=LTnewLM_230009100.1 ### LTnewLM_23 . polypeptide 134025 134798 . + . ID=LTnewLM_230009100.1:pep;Derives_from=LTnewLM_230009100.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 136381 137439 1 + . ID=LTnewLM_230009200 LTnewLM_23 AUGUSTUS mRNA 136381 137439 1 + . ID=LTnewLM_230009200.1;Parent=LTnewLM_230009200 LTnewLM_23 AUGUSTUS CDS 136381 137439 1 + 0 ID=LTnewLM_230009200.1:CDS:1;Parent=LTnewLM_230009200.1 ### LTnewLM_23 . polypeptide 136381 137439 . + . ID=LTnewLM_230009200.1:pep;Derives_from=LTnewLM_230009200.1;orthologous_to=LmjF.23.0360_mRNA;ortholog_cluster=OG0002422;product=term%3DAlcohol dehydrogenase GroES-like domain/Alanine dehydrogenase/PNT%2C C-terminal domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF01262|Pfam:PF00107;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_23 Pfam protein_match 136465 136812 . + . Parent=LTnewLM_230009200.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_23 Pfam protein_match 136903 137148 . + . Parent=LTnewLM_230009200.1:pep;Name=PF01262;signature_desc=Alanine dehydrogenase/PNT%2C C-terminal domain LTnewLM_23 Pfam protein_match 136939 137301 . + . Parent=LTnewLM_230009200.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 ### LTnewLM_23 AUGUSTUS gene 140811 141167 1 + . ID=LTnewLM_230009300 LTnewLM_23 AUGUSTUS mRNA 140811 141167 1 + . ID=LTnewLM_230009300.1;Parent=LTnewLM_230009300 LTnewLM_23 AUGUSTUS CDS 140811 141167 1 + 0 ID=LTnewLM_230009300.1:CDS:1;Parent=LTnewLM_230009300.1 ### LTnewLM_23 . polypeptide 140811 141167 . + . ID=LTnewLM_230009300.1:pep;Derives_from=LTnewLM_230009300.1;orthologous_to=LmjF.23.0370_mRNA;ortholog_cluster=OG0002423;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 144156 147896 1 + . ID=LTnewLM_230009400 LTnewLM_23 AUGUSTUS mRNA 144156 147896 1 + . ID=LTnewLM_230009400.1;Parent=LTnewLM_230009400 LTnewLM_23 AUGUSTUS CDS 144156 147896 1 + 0 ID=LTnewLM_230009400.1:CDS:1;Parent=LTnewLM_230009400.1 ### LTnewLM_23 . polypeptide 144156 147896 . + . ID=LTnewLM_230009400.1:pep;Derives_from=LTnewLM_230009400.1;orthologous_to=LmjF.23.0380_mRNA;ortholog_cluster=OG0002424;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_23 Pfam protein_match 145974 146444 . + . Parent=LTnewLM_230009400.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 147048 147683 . + . Parent=LTnewLM_230009400.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 ### LTnewLM_23 AUGUSTUS gene 149555 155506 1 + . ID=LTnewLM_230009500 LTnewLM_23 AUGUSTUS mRNA 149555 155506 1 + . ID=LTnewLM_230009500.1;Parent=LTnewLM_230009500 LTnewLM_23 AUGUSTUS CDS 149555 155506 1 + 0 ID=LTnewLM_230009500.1:CDS:1;Parent=LTnewLM_230009500.1 ### LTnewLM_23 . polypeptide 149555 155506 . + . ID=LTnewLM_230009500.1:pep;Derives_from=LTnewLM_230009500.1;orthologous_to=LmjF.23.0390_mRNA;ortholog_cluster=OG0002425;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . polypeptide 157344 160368 . + . ID=LTnewLM_230009600.1:pep;Derives_from=LTnewLM_230009600.1;orthologous_to=LTnewLM_230009600.2;ortholog_cluster=OG0002426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 157344 161663 1.4 + . ID=LTnewLM_230009600 LTnewLM_23 AUGUSTUS mRNA 157344 160368 0.45 + . ID=LTnewLM_230009600.1;Parent=LTnewLM_230009600 LTnewLM_23 AUGUSTUS CDS 157344 160251 0.62 + 0 ID=LTnewLM_230009600.1:CDS:1;Parent=LTnewLM_230009600.1 LTnewLM_23 AUGUSTUS CDS 160313 160368 0.52 + 2 ID=LTnewLM_230009600.1:CDS:2;Parent=LTnewLM_230009600.1 LTnewLM_23 AUGUSTUS mRNA 157344 161663 0.95 + . ID=LTnewLM_230009600.2;Parent=LTnewLM_230009600 LTnewLM_23 AUGUSTUS CDS 157344 161663 0.95 + 0 ID=LTnewLM_230009600.2:CDS:1;Parent=LTnewLM_230009600.2 ### LTnewLM_23 . polypeptide 157344 161663 . + . ID=LTnewLM_230009600.2:pep;Derives_from=LTnewLM_230009600.2;orthologous_to=LTnewLM_230009600.1;ortholog_cluster=OG0002426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 162046 162475 . + . ID=LTnewLM_230009700:pseudogene;coverage=0.995;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0420_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 162046 162475 . + . ID=LTnewLM_230009700.1;Parent=LTnewLM_230009700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 162046 162475 . + . ID=LTnewLM_230009700.1:pseudogenic_exon:1;Parent=LTnewLM_230009700.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 162046 162475 . + . ID=LTnewLM_230009700.1:pep;Derives_from=LTnewLM_230009700.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 164059 165285 1 + . ID=LTnewLM_230009800 LTnewLM_23 AUGUSTUS mRNA 164059 165285 1 + . ID=LTnewLM_230009800.1;Parent=LTnewLM_230009800 LTnewLM_23 AUGUSTUS CDS 164059 165285 1 + 0 ID=LTnewLM_230009800.1:CDS:1;Parent=LTnewLM_230009800.1 ### LTnewLM_23 . polypeptide 164059 165285 . + . ID=LTnewLM_230009800.1:pep;Derives_from=LTnewLM_230009800.1;orthologous_to=LmjF.23.0430_mRNA;ortholog_cluster=OG0002427;product=term%3DAldose 1-epimerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01263;Ontology_term=GO:0005975,GO:0016853 LTnewLM_23 Pfam protein_match 164143 165219 . + . Parent=LTnewLM_230009800.1:pep;Name=PF01263;signature_desc=Aldose 1-epimerase;Ontology_term=GO:0016853,GO:0005975 ### LTnewLM_23 AUGUSTUS gene 167526 168479 1 + . ID=LTnewLM_230009900 LTnewLM_23 AUGUSTUS mRNA 167526 168479 1 + . ID=LTnewLM_230009900.1;Parent=LTnewLM_230009900 LTnewLM_23 AUGUSTUS CDS 167526 168479 1 + 0 ID=LTnewLM_230009900.1:CDS:1;Parent=LTnewLM_230009900.1 ### LTnewLM_23 . polypeptide 167526 168479 . + . ID=LTnewLM_230009900.1:pep;Derives_from=LTnewLM_230009900.1;orthologous_to=LmjF.23.0440_mRNA;ortholog_cluster=OG0002428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 171412 174726 1 + . ID=LTnewLM_230010000 LTnewLM_23 AUGUSTUS mRNA 171412 174726 1 + . ID=LTnewLM_230010000.1;Parent=LTnewLM_230010000 LTnewLM_23 AUGUSTUS CDS 171412 174726 1 + 0 ID=LTnewLM_230010000.1:CDS:1;Parent=LTnewLM_230010000.1 ### LTnewLM_23 . polypeptide 171412 174726 . + . ID=LTnewLM_230010000.1:pep;Derives_from=LTnewLM_230010000.1;orthologous_to=LmjF.23.0450_mRNA;ortholog_cluster=OG0002429;product=term%3DFtsX-like permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02687;Ontology_term=GO:0016020 LTnewLM_23 Pfam protein_match 172609 172965 . + . Parent=LTnewLM_230010000.1:pep;Name=PF02687;signature_desc=FtsX-like permease family;Ontology_term=GO:0016020 LTnewLM_23 Pfam protein_match 174346 174696 . + . Parent=LTnewLM_230010000.1:pep;Name=PF02687;signature_desc=FtsX-like permease family;Ontology_term=GO:0016020 ### LTnewLM_23 AUGUSTUS gene 179207 180184 0.89 + . ID=LTnewLM_230010100 LTnewLM_23 AUGUSTUS mRNA 179207 180184 0.89 + . ID=LTnewLM_230010100.1;Parent=LTnewLM_230010100 LTnewLM_23 AUGUSTUS CDS 179207 180041 0.91 + 0 ID=LTnewLM_230010100.1:CDS:1;Parent=LTnewLM_230010100.1 LTnewLM_23 AUGUSTUS CDS 180132 180184 0.89 + 2 ID=LTnewLM_230010100.1:CDS:2;Parent=LTnewLM_230010100.1 ### LTnewLM_23 . polypeptide 179207 180184 . + . ID=LTnewLM_230010100.1:pep;Derives_from=LTnewLM_230010100.1;orthologous_to=LmjF.23.0460_mRNA;ortholog_cluster=OG0002430;product=term%3DCHAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257 LTnewLM_23 Pfam protein_match 179537 179974 . + . Parent=LTnewLM_230010100.1:pep;Name=PF05257;signature_desc=CHAP domain ### LTnewLM_23 AUGUSTUS gene 180865 181881 1 + . ID=LTnewLM_230010200 LTnewLM_23 AUGUSTUS mRNA 180865 181881 1 + . ID=LTnewLM_230010200.1;Parent=LTnewLM_230010200 LTnewLM_23 AUGUSTUS CDS 180865 181881 1 + 0 ID=LTnewLM_230010200.1:CDS:1;Parent=LTnewLM_230010200.1 ### LTnewLM_23 . polypeptide 180865 181881 . + . ID=LTnewLM_230010200.1:pep;Derives_from=LTnewLM_230010200.1;orthologous_to=LmjF.23.0470_mRNA;ortholog_cluster=OG0002431;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 182848 187098 1 + . ID=LTnewLM_230010300 LTnewLM_23 AUGUSTUS mRNA 182848 187098 1 + . ID=LTnewLM_230010300.1;Parent=LTnewLM_230010300 LTnewLM_23 AUGUSTUS CDS 182848 187098 1 + 0 ID=LTnewLM_230010300.1:CDS:1;Parent=LTnewLM_230010300.1 ### LTnewLM_23 . polypeptide 182848 187098 . + . ID=LTnewLM_230010300.1:pep;Derives_from=LTnewLM_230010300.1;orthologous_to=LmjF.23.0480_mRNA;ortholog_cluster=OG0002432;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 187692 188363 1 + . ID=LTnewLM_230010400 LTnewLM_23 AUGUSTUS mRNA 187692 188363 1 + . ID=LTnewLM_230010400.1;Parent=LTnewLM_230010400 LTnewLM_23 AUGUSTUS CDS 187692 188363 1 + 0 ID=LTnewLM_230010400.1:CDS:1;Parent=LTnewLM_230010400.1 ### LTnewLM_23 . polypeptide 187692 188363 . + . ID=LTnewLM_230010400.1:pep;Derives_from=LTnewLM_230010400.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 189935 190951 1 + . ID=LTnewLM_230010500 LTnewLM_23 AUGUSTUS mRNA 189935 190951 1 + . ID=LTnewLM_230010500.1;Parent=LTnewLM_230010500 LTnewLM_23 AUGUSTUS CDS 189935 190951 1 + 0 ID=LTnewLM_230010500.1:CDS:1;Parent=LTnewLM_230010500.1 ### LTnewLM_23 . polypeptide 189935 190951 . + . ID=LTnewLM_230010500.1:pep;Derives_from=LTnewLM_230010500.1;orthologous_to=LmjF.23.0490_mRNA;ortholog_cluster=OG0002433;product=term%3DGlycogen recognition site of AMP-activated protein kinase/5'-AMP-activated protein kinase beta subunit%2C interaction domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16561|Pfam:PF04739;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 190259 190417 . + . Parent=LTnewLM_230010500.1:pep;Name=PF16561;signature_desc=Glycogen recognition site of AMP-activated protein kinase LTnewLM_23 Pfam protein_match 190643 190900 . + . Parent=LTnewLM_230010500.1:pep;Name=PF04739;signature_desc=5'-AMP-activated protein kinase beta subunit%2C interaction domain;Ontology_term=GO:0005515 ### LTnewLM_23 . pseudogene 191371 192864 . + . ID=LTnewLM_230010600:pseudogene;coverage=0.995;sequence_ID=0.925;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.23.0500_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 191371 192864 . + . ID=LTnewLM_230010600.1;Parent=LTnewLM_230010600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 191767 192864 . + . ID=LTnewLM_230010600.1:pseudogenic_exon:1;Parent=LTnewLM_230010600.1;extra_copy_number=0 LTnewLM_23 . pseudogenic_transcript 191374 192864 . + . ID=LTnewLM_230010600.2;Parent=LTnewLM_230010600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 192010 192864 . + . ID=LTnewLM_230010600.2:pseudogenic_exon:1;Parent=LTnewLM_230010600.2;extra_copy_number=0 ### LTnewLM_23 . polypeptide 191767 192864 . + . ID=LTnewLM_230010600.1:pep;Derives_from=LTnewLM_230010600.1;orthologous_to=LTnewLM_230010600.2,LmjF.23.0500.1_mRNA,LmjF.23.0500.2_mRNA;ortholog_cluster=OG0000288;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . polypeptide 192010 192864 . + . ID=LTnewLM_230010600.2:pep;Derives_from=LTnewLM_230010600.2;orthologous_to=LTnewLM_230010600.1,LmjF.23.0500.1_mRNA,LmjF.23.0500.2_mRNA;ortholog_cluster=OG0000288;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 193549 193845 1 + . ID=LTnewLM_230010700 LTnewLM_23 AUGUSTUS mRNA 193549 193845 1 + . ID=LTnewLM_230010700.1;Parent=LTnewLM_230010700 LTnewLM_23 AUGUSTUS CDS 193549 193845 1 + 0 ID=LTnewLM_230010700.1:CDS:1;Parent=LTnewLM_230010700.1 ### LTnewLM_23 . polypeptide 193549 193845 . + . ID=LTnewLM_230010700.1:pep;Derives_from=LTnewLM_230010700.1;orthologous_to=LmjF.23.0510_mRNA;ortholog_cluster=OG0002434;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 195770 196834 1 + . ID=LTnewLM_230010800 LTnewLM_23 AUGUSTUS mRNA 195770 196834 1 + . ID=LTnewLM_230010800.1;Parent=LTnewLM_230010800 LTnewLM_23 AUGUSTUS CDS 195770 196834 1 + 0 ID=LTnewLM_230010800.1:CDS:1;Parent=LTnewLM_230010800.1 ### LTnewLM_23 . polypeptide 195770 196834 . + . ID=LTnewLM_230010800.1:pep;Derives_from=LTnewLM_230010800.1;orthologous_to=LmjF.23.0520_mRNA;ortholog_cluster=OG0002435;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 195950 196777 . + . Parent=LTnewLM_230010800.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_23 AUGUSTUS gene 198401 199279 1 + . ID=LTnewLM_230010900 LTnewLM_23 AUGUSTUS mRNA 198401 199279 1 + . ID=LTnewLM_230010900.1;Parent=LTnewLM_230010900 LTnewLM_23 AUGUSTUS CDS 198401 199279 1 + 0 ID=LTnewLM_230010900.1:CDS:1;Parent=LTnewLM_230010900.1 ### LTnewLM_23 . polypeptide 198401 199279 . + . ID=LTnewLM_230010900.1:pep;Derives_from=LTnewLM_230010900.1;orthologous_to=LmjF.23.0530_mRNA;ortholog_cluster=OG0002436;product=term%3DFtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_23 Pfam protein_match 198518 199117 . + . Parent=LTnewLM_230010900.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_23 AUGUSTUS gene 200844 202961 1 + . ID=LTnewLM_230011000 LTnewLM_23 AUGUSTUS mRNA 200844 202961 1 + . ID=LTnewLM_230011000.1;Parent=LTnewLM_230011000 LTnewLM_23 AUGUSTUS CDS 200844 202961 1 + 0 ID=LTnewLM_230011000.1:CDS:1;Parent=LTnewLM_230011000.1 ### LTnewLM_23 . polypeptide 200844 202961 . + . ID=LTnewLM_230011000.1:pep;Derives_from=LTnewLM_230011000.1;orthologous_to=LTnewLM_230015300.1,LmjF.23.0540_mRNA,LmjF.23.0710_mRNA;ortholog_cluster=OG0000169;product=term%3DAcetyl-coenzyme A synthetase N-terminus/AMP-binding enzyme/AMP-binding enzyme C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16177|Pfam:PF00501|Pfam:PF13193;Ontology_term=GO:0003824,GO:0008152 LTnewLM_23 Pfam protein_match 201039 201218 . + . Parent=LTnewLM_230011000.1:pep;Name=PF16177;signature_desc=Acetyl-coenzyme A synthetase N-terminus LTnewLM_23 Pfam protein_match 201234 202562 . + . Parent=LTnewLM_230011000.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_23 Pfam protein_match 202590 202826 . + . Parent=LTnewLM_230011000.1:pep;Name=PF13193;signature_desc=AMP-binding enzyme C-terminal domain ### LTnewLM_23 . pseudogene 203641 205449 . + . ID=LTnewLM_230011100:pseudogene;coverage=0.981;sequence_ID=0.901;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.23.0542_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 203641 205449 . + . ID=LTnewLM_230011100.1;Parent=LTnewLM_230011100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 204311 205449 . + . ID=LTnewLM_230011100.1:pseudogenic_exon:1;Parent=LTnewLM_230011100.1;extra_copy_number=0 LTnewLM_23 . pseudogenic_transcript 204446 205449 . + . ID=LTnewLM_230011100.2;Parent=LTnewLM_230011100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 204526 205449 . + . ID=LTnewLM_230011100.2:pseudogenic_exon:1;Parent=LTnewLM_230011100.2;extra_copy_number=0 ### LTnewLM_23 . polypeptide 204311 205449 . + . ID=LTnewLM_230011100.1:pep;Derives_from=LTnewLM_230011100.1;product=term%3Dhypothetical protein ### LTnewLM_23 . polypeptide 204526 205449 . + . ID=LTnewLM_230011100.2:pep;Derives_from=LTnewLM_230011100.2;orthologous_to=LmjF.23.0542.1_mRNA,LmjF.23.0542.2_mRNA;ortholog_cluster=OG0000523;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 206352 209558 1 + . ID=LTnewLM_230011200 LTnewLM_23 AUGUSTUS mRNA 206352 209558 1 + . ID=LTnewLM_230011200.1;Parent=LTnewLM_230011200 LTnewLM_23 AUGUSTUS CDS 206352 209558 1 + 0 ID=LTnewLM_230011200.1:CDS:1;Parent=LTnewLM_230011200.1 ### LTnewLM_23 . polypeptide 206352 209558 . + . ID=LTnewLM_230011200.1:pep;Derives_from=LTnewLM_230011200.1;orthologous_to=LmjF.23.0543_mRNA;ortholog_cluster=OG0002437;product=term%3DXRN 5'-3' exonuclease N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159;Ontology_term=GO:0003676,GO:0004527 LTnewLM_23 Pfam protein_match 206352 207155 . + . Parent=LTnewLM_230011200.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 ### LTnewLM_23 AUGUSTUS gene 212584 215232 1 + . ID=LTnewLM_230011300 LTnewLM_23 AUGUSTUS mRNA 212584 215232 1 + . ID=LTnewLM_230011300.1;Parent=LTnewLM_230011300 LTnewLM_23 AUGUSTUS CDS 212584 215232 1 + 0 ID=LTnewLM_230011300.1:CDS:1;Parent=LTnewLM_230011300.1 ### LTnewLM_23 . polypeptide 212584 215232 . + . ID=LTnewLM_230011300.1:pep;Derives_from=LTnewLM_230011300.1;orthologous_to=LmjF.23.0547_mRNA;ortholog_cluster=OG0002438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 217343 218740 1 + . ID=LTnewLM_230011400 LTnewLM_23 AUGUSTUS mRNA 217343 218740 1 + . ID=LTnewLM_230011400.1;Parent=LTnewLM_230011400 LTnewLM_23 AUGUSTUS CDS 217343 218740 1 + 0 ID=LTnewLM_230011400.1:CDS:1;Parent=LTnewLM_230011400.1 ### LTnewLM_23 . polypeptide 217343 218740 . + . ID=LTnewLM_230011400.1:pep;Derives_from=LTnewLM_230011400.1;orthologous_to=LmjF.23.1590_mRNA;ortholog_cluster=OG0002439;product=term%3DOxidoreductase family%2C NAD-binding Rossmann fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01408;Ontology_term=GO:0016491 LTnewLM_23 Pfam protein_match 217358 217753 . + . Parent=LTnewLM_230011400.1:pep;Name=PF01408;signature_desc=Oxidoreductase family%2C NAD-binding Rossmann fold;Ontology_term=GO:0016491 ### LTnewLM_23 . pseudogene 220502 221608 . + . ID=LTnewLM_230011500:pseudogene;coverage=0.997;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1600_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 220502 221608 . + . ID=LTnewLM_230011500.1;Parent=LTnewLM_230011500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 220502 221608 . + . ID=LTnewLM_230011500.1:pseudogenic_exon:1;Parent=LTnewLM_230011500.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 220502 221608 . + . ID=LTnewLM_230011500.1:pep;Derives_from=LTnewLM_230011500.1;orthologous_to=LmjF.23.1600_mRNA;ortholog_cluster=OG0007514;product=term%3DOxidoreductase family%2C NAD-binding Rossmann fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01408;Ontology_term=GO:0016491 LTnewLM_23 Pfam protein_match 220517 220888 . + . Parent=LTnewLM_230011500.1:pep;Name=PF01408;signature_desc=Oxidoreductase family%2C NAD-binding Rossmann fold;Ontology_term=GO:0016491 ### LTnewLM_23 AUGUSTUS gene 222893 223927 1 + . ID=LTnewLM_230011600 LTnewLM_23 AUGUSTUS mRNA 222893 223927 1 + . ID=LTnewLM_230011600.1;Parent=LTnewLM_230011600 LTnewLM_23 AUGUSTUS CDS 222893 223927 1 + 0 ID=LTnewLM_230011600.1:CDS:1;Parent=LTnewLM_230011600.1 ### LTnewLM_23 . polypeptide 222893 223927 . + . ID=LTnewLM_230011600.1:pep;Derives_from=LTnewLM_230011600.1;orthologous_to=LmjF.23.1610_mRNA;ortholog_cluster=OG0002440;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 224690 226528 1 + . ID=LTnewLM_230011700 LTnewLM_23 AUGUSTUS mRNA 224690 226528 1 + . ID=LTnewLM_230011700.1;Parent=LTnewLM_230011700 LTnewLM_23 AUGUSTUS CDS 224690 226528 1 + 0 ID=LTnewLM_230011700.1:CDS:1;Parent=LTnewLM_230011700.1 ### LTnewLM_23 . polypeptide 224690 226528 . + . ID=LTnewLM_230011700.1:pep;Derives_from=LTnewLM_230011700.1;orthologous_to=LmjF.23.1620_mRNA;ortholog_cluster=OG0002441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 227046 228848 1 + . ID=LTnewLM_230011800 LTnewLM_23 AUGUSTUS mRNA 227046 228848 1 + . ID=LTnewLM_230011800.1;Parent=LTnewLM_230011800 LTnewLM_23 AUGUSTUS CDS 227046 228848 1 + 0 ID=LTnewLM_230011800.1:CDS:1;Parent=LTnewLM_230011800.1 ### LTnewLM_23 . polypeptide 227046 228848 . + . ID=LTnewLM_230011800.1:pep;Derives_from=LTnewLM_230011800.1;orthologous_to=LmjF.23.1630_mRNA;ortholog_cluster=OG0002442;product=term%3DCAF1 family ribonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04857;Ontology_term=GO:0005634 LTnewLM_23 Pfam protein_match 227052 228323 . + . Parent=LTnewLM_230011800.1:pep;Name=PF04857;signature_desc=CAF1 family ribonuclease;Ontology_term=GO:0005634 ### LTnewLM_23 Aragorn_1.2.36 gene 229160 229234 . + . ID=LTnewLM_230011900 LTnewLM_23 Aragorn_1.2.36 tRNA 229160 229234 . + . ID=LTnewLM_230011900:tRNA;Parent=LTnewLM_230011900;aa=Ile;anticodon=tat;gc_content=64.0 ### LTnewLM_23 Aragorn_1.2.36 gene 229278 229350 . - . ID=LTnewLM_230012000 LTnewLM_23 Aragorn_1.2.36 tRNA 229278 229350 . - . ID=LTnewLM_230012000:tRNA;Parent=LTnewLM_230012000;aa=Val;anticodon=tac;gc_content=58.9 ### LTnewLM_23 Aragorn_1.2.36 gene 229418 229490 . - . ID=LTnewLM_230012100 LTnewLM_23 Aragorn_1.2.36 tRNA 229418 229490 . - . ID=LTnewLM_230012100:tRNA;Parent=LTnewLM_230012100;aa=Gln;anticodon=ttg;gc_content=47.9 ### LTnewLM_23 GenomeTools gene 229548 229666 93 - . ID=LTnewLM_230012200 LTnewLM_23 INFERNAL rRNA 229548 229666 93 - . ID=LTnewLM_230012200:rRNA;Parent=LTnewLM_230012200;gc=0.50;evalue=3.7e-20;score=93.0;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_23 Liftoff gene 229548 229670 . - . ID=LTnewLM_230012300;coverage=1.0;sequence_ID=0.991;extra_copy_number=0;copy_num_ID=LmjF.11.5SRRNA.01_0 LTnewLM_23 Liftoff rRNA 229548 229670 . - . ID=LTnewLM_230012300:rRNA;Parent=LTnewLM_230012300;extra_copy_number=0 ### LTnewLM_23 Aragorn_1.2.36 gene 229734 229807 . - . ID=LTnewLM_230012400 LTnewLM_23 Aragorn_1.2.36 tRNA 229734 229807 . - . ID=LTnewLM_230012400:tRNA;Parent=LTnewLM_230012400;aa=Arg;anticodon=acg;gc_content=52.7 ### LTnewLM_23 Aragorn_1.2.36 gene 230028 230112 . - . ID=LTnewLM_230012500 LTnewLM_23 Aragorn_1.2.36 tRNA 230028 230112 . - . ID=LTnewLM_230012500:tRNA;Parent=LTnewLM_230012500;aa=Leu;anticodon=cag;gc_content=55.3 ### LTnewLM_23 Aragorn_1.2.36 gene 230168 230241 . - . ID=LTnewLM_230012600 LTnewLM_23 Aragorn_1.2.36 tRNA 230168 230241 . - . ID=LTnewLM_230012600:tRNA;Parent=LTnewLM_230012600;aa=Thr;anticodon=tgt;gc_content=58.1 ### LTnewLM_23 Aragorn_1.2.36 gene 230313 230384 . + . ID=LTnewLM_230012700 LTnewLM_23 Aragorn_1.2.36 tRNA 230313 230384 . + . ID=LTnewLM_230012700:tRNA;Parent=LTnewLM_230012700;aa=Arg;anticodon=tcg;gc_content=61.1 ### LTnewLM_23 Aragorn_1.2.36 gene 230699 230771 . + . ID=LTnewLM_230012800 LTnewLM_23 Aragorn_1.2.36 tRNA 230699 230771 . + . ID=LTnewLM_230012800:tRNA;Parent=LTnewLM_230012800;aa=Lys;anticodon=ttt;gc_content=60.3 ### LTnewLM_23 Aragorn_1.2.36 gene 230820 230892 . - . ID=LTnewLM_230012900 LTnewLM_23 Aragorn_1.2.36 tRNA 230820 230892 . - . ID=LTnewLM_230012900:tRNA;Parent=LTnewLM_230012900;aa=Gly;anticodon=tcc;gc_content=60.3 ### LTnewLM_23 Aragorn_1.2.36 gene 230968 231039 . + . ID=LTnewLM_230013000 LTnewLM_23 Aragorn_1.2.36 tRNA 230968 231039 . + . ID=LTnewLM_230013000:tRNA;Parent=LTnewLM_230013000;aa=Trp;anticodon=cca;gc_content=54.2 ### LTnewLM_23 AUGUSTUS gene 232011 242015 1 - . ID=LTnewLM_230013100 LTnewLM_23 AUGUSTUS mRNA 232011 242015 1 - . ID=LTnewLM_230013100.1;Parent=LTnewLM_230013100 LTnewLM_23 AUGUSTUS CDS 232011 242015 1 - 0 ID=LTnewLM_230013100.1:CDS:1;Parent=LTnewLM_230013100.1 ### LTnewLM_23 . polypeptide 232011 242015 . - . ID=LTnewLM_230013100.1:pep;Derives_from=LTnewLM_230013100.1;orthologous_to=LmjF.23.1640_mRNA;ortholog_cluster=OG0002443;product=term%3DGalactose oxidase%2C central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13415 LTnewLM_23 Pfam protein_match 236778 236948 . - . Parent=LTnewLM_230013100.1:pep;Name=PF13415;signature_desc=Galactose oxidase%2C central domain ### LTnewLM_23 AUGUSTUS gene 245352 245825 1 - . ID=LTnewLM_230013200 LTnewLM_23 AUGUSTUS mRNA 245352 245825 1 - . ID=LTnewLM_230013200.1;Parent=LTnewLM_230013200 LTnewLM_23 AUGUSTUS CDS 245352 245825 1 - 0 ID=LTnewLM_230013200.1:CDS:1;Parent=LTnewLM_230013200.1 ### LTnewLM_23 . polypeptide 245352 245825 . - . ID=LTnewLM_230013200.1:pep;Derives_from=LTnewLM_230013200.1;orthologous_to=LmjF.23.1650_mRNA;ortholog_cluster=OG0002444;product=term%3DPutative tRNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01588;Ontology_term=GO:0000049 LTnewLM_23 Pfam protein_match 245394 245690 . - . Parent=LTnewLM_230013200.1:pep;Name=PF01588;signature_desc=Putative tRNA binding domain;Ontology_term=GO:0000049 ### LTnewLM_23 AUGUSTUS gene 246392 247534 1 - . ID=LTnewLM_230013300 LTnewLM_23 AUGUSTUS mRNA 246392 247534 1 - . ID=LTnewLM_230013300.1;Parent=LTnewLM_230013300 LTnewLM_23 AUGUSTUS CDS 246392 247534 1 - 0 ID=LTnewLM_230013300.1:CDS:1;Parent=LTnewLM_230013300.1 ### LTnewLM_23 . polypeptide 246392 247534 . - . ID=LTnewLM_230013300.1:pep;Derives_from=LTnewLM_230013300.1;orthologous_to=LmjF.23.1660_mRNA;ortholog_cluster=OG0002445;product=term%3DMetallo-beta-lactamase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00753 LTnewLM_23 Pfam protein_match 246515 246715 . - . Parent=LTnewLM_230013300.1:pep;Name=PF00753;signature_desc=Metallo-beta-lactamase superfamily ### LTnewLM_23 AUGUSTUS gene 250725 251435 1 - . ID=LTnewLM_230013400 LTnewLM_23 AUGUSTUS mRNA 250725 251435 1 - . ID=LTnewLM_230013400.1;Parent=LTnewLM_230013400 LTnewLM_23 AUGUSTUS CDS 250725 251435 1 - 0 ID=LTnewLM_230013400.1:CDS:1;Parent=LTnewLM_230013400.1 ### LTnewLM_23 . polypeptide 250725 251435 . - . ID=LTnewLM_230013400.1:pep;Derives_from=LTnewLM_230013400.1;orthologous_to=LmjF.23.1665_mRNA;ortholog_cluster=OG0002446;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_23 Pfam protein_match 250929 251249 . - . Parent=LTnewLM_230013400.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_23 . polypeptide 253012 253284 . - . ID=LTnewLM_230013500.1:pep;Derives_from=LTnewLM_230013500.1;orthologous_to=LTnewLM_190019200.1,LTnewLM_230013500.2,LTnewLM_270022100.1,LTnewLM_350016500.1,LTnewLM_360029300.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 253012 253404 0.88 - . ID=LTnewLM_230013500 LTnewLM_23 AUGUSTUS mRNA 253012 253284 0.64 - . ID=LTnewLM_230013500.1;Parent=LTnewLM_230013500 LTnewLM_23 AUGUSTUS CDS 253012 253284 0.64 - 0 ID=LTnewLM_230013500.1:CDS:1;Parent=LTnewLM_230013500.1 LTnewLM_23 AUGUSTUS mRNA 253012 253404 0.24 - . ID=LTnewLM_230013500.2;Parent=LTnewLM_230013500 LTnewLM_23 AUGUSTUS CDS 253012 253404 0.24 - 0 ID=LTnewLM_230013500.2:CDS:1;Parent=LTnewLM_230013500.2 ### LTnewLM_23 . polypeptide 253012 253404 . - . ID=LTnewLM_230013500.2:pep;Derives_from=LTnewLM_230013500.2;orthologous_to=LTnewLM_190019200.1,LTnewLM_230013500.1,LTnewLM_270022100.1,LTnewLM_350016500.1,LTnewLM_360029300.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 254822 257956 1 - . ID=LTnewLM_230013600 LTnewLM_23 AUGUSTUS mRNA 254822 257956 1 - . ID=LTnewLM_230013600.1;Parent=LTnewLM_230013600 LTnewLM_23 AUGUSTUS CDS 254822 257956 1 - 0 ID=LTnewLM_230013600.1:CDS:1;Parent=LTnewLM_230013600.1 ### LTnewLM_23 . polypeptide 254822 257956 . - . ID=LTnewLM_230013600.1:pep;Derives_from=LTnewLM_230013600.1;orthologous_to=LmjF.23.0550_mRNA;ortholog_cluster=OG0002447;product=term%3DThiF family/Ubiquitin-activating enzyme%2C SCCH domain/Ubiquitin fold domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899|Pfam:PF10585|Pfam:PF09358;Ontology_term=GO:0008641 LTnewLM_23 Pfam protein_match 254846 255118 . - . Parent=LTnewLM_230013600.1:pep;Name=PF09358;signature_desc=Ubiquitin fold domain LTnewLM_23 Pfam protein_match 255335 256696 . - . Parent=LTnewLM_230013600.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 LTnewLM_23 Pfam protein_match 255431 256153 . - . Parent=LTnewLM_230013600.1:pep;Name=PF10585;signature_desc=Ubiquitin-activating enzyme%2C SCCH domain LTnewLM_23 Pfam protein_match 256796 257923 . - . Parent=LTnewLM_230013600.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_23 AUGUSTUS gene 262234 264522 1 - . ID=LTnewLM_230013700 LTnewLM_23 AUGUSTUS mRNA 262234 264522 1 - . ID=LTnewLM_230013700.1;Parent=LTnewLM_230013700 LTnewLM_23 AUGUSTUS CDS 262234 264522 1 - 0 ID=LTnewLM_230013700.1:CDS:1;Parent=LTnewLM_230013700.1 ### LTnewLM_23 . polypeptide 262234 264522 . - . ID=LTnewLM_230013700.1:pep;Derives_from=LTnewLM_230013700.1;orthologous_to=LmjF.23.0560_mRNA;ortholog_cluster=OG0002448;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_23 Pfam protein_match 263071 264240 . - . Parent=LTnewLM_230013700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_23 Pfam protein_match 263710 264255 . - . Parent=LTnewLM_230013700.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_23 AUGUSTUS gene 266599 269817 1 - . ID=LTnewLM_230013800 LTnewLM_23 AUGUSTUS mRNA 266599 269817 1 - . ID=LTnewLM_230013800.1;Parent=LTnewLM_230013800 LTnewLM_23 AUGUSTUS CDS 266599 269817 1 - 0 ID=LTnewLM_230013800.1:CDS:1;Parent=LTnewLM_230013800.1 ### LTnewLM_23 . polypeptide 266599 269817 . - . ID=LTnewLM_230013800.1:pep;Derives_from=LTnewLM_230013800.1;orthologous_to=LmjF.23.0570_mRNA;ortholog_cluster=OG0002449;product=term%3DMYCBP-associated protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14646 LTnewLM_23 Pfam protein_match 267841 268452 . - . Parent=LTnewLM_230013800.1:pep;Name=PF14646;signature_desc=MYCBP-associated protein family ### LTnewLM_23 . pseudogene 270996 274721 . - . ID=LTnewLM_230013900:pseudogene;coverage=0.998;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0580_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 270996 274721 . - . ID=LTnewLM_230013900.1;Parent=LTnewLM_230013900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 270996 274721 . - . ID=LTnewLM_230013900.1:pseudogenic_exon:1;Parent=LTnewLM_230013900.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 270996 274721 . - . ID=LTnewLM_230013900.1:pep;Derives_from=LTnewLM_230013900.1;orthologous_to=LmjF.23.0580_mRNA;ortholog_cluster=OG0007515;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 276119 277348 1 - . ID=LTnewLM_230014000 LTnewLM_23 AUGUSTUS mRNA 276119 277348 1 - . ID=LTnewLM_230014000.1;Parent=LTnewLM_230014000 LTnewLM_23 AUGUSTUS CDS 276119 277348 1 - 0 ID=LTnewLM_230014000.1:CDS:1;Parent=LTnewLM_230014000.1 ### LTnewLM_23 . polypeptide 276119 277348 . - . ID=LTnewLM_230014000.1:pep;Derives_from=LTnewLM_230014000.1;orthologous_to=LmjF.23.0590_mRNA;ortholog_cluster=OG0002450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 280316 281101 1 - . ID=LTnewLM_230014100 LTnewLM_23 AUGUSTUS mRNA 280316 281101 1 - . ID=LTnewLM_230014100.1;Parent=LTnewLM_230014100 LTnewLM_23 AUGUSTUS CDS 280316 281101 1 - 0 ID=LTnewLM_230014100.1:CDS:1;Parent=LTnewLM_230014100.1 ### LTnewLM_23 . polypeptide 280316 281101 . - . ID=LTnewLM_230014100.1:pep;Derives_from=LTnewLM_230014100.1;orthologous_to=LmjF.23.0600_mRNA;ortholog_cluster=OG0002451;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 284392 286221 . - . ID=LTnewLM_230014200:pseudogene;coverage=0.999;sequence_ID=0.911;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0610_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 284392 286221 . - . ID=LTnewLM_230014200.1;Parent=LTnewLM_230014200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 284392 286221 . - . ID=LTnewLM_230014200.1:pseudogenic_exon:1;Parent=LTnewLM_230014200.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 284392 286221 . - . ID=LTnewLM_230014200.1:pep;Derives_from=LTnewLM_230014200.1;orthologous_to=LmjF.23.0610_mRNA;ortholog_cluster=OG0007516;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 289141 291183 1 - . ID=LTnewLM_230014300 LTnewLM_23 AUGUSTUS mRNA 289141 291183 1 - . ID=LTnewLM_230014300.1;Parent=LTnewLM_230014300 LTnewLM_23 AUGUSTUS CDS 289141 291183 1 - 0 ID=LTnewLM_230014300.1:CDS:1;Parent=LTnewLM_230014300.1 ### LTnewLM_23 . polypeptide 289141 291183 . - . ID=LTnewLM_230014300.1:pep;Derives_from=LTnewLM_230014300.1;orthologous_to=LmjF.23.0620_mRNA;ortholog_cluster=OG0002452;product=term%3DWD domain%2C G-beta repeat/BING4CT (NUC141) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF08149;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 289804 290040 . - . Parent=LTnewLM_230014300.1:pep;Name=PF08149;signature_desc=BING4CT (NUC141) domain LTnewLM_23 Pfam protein_match 290191 290298 . - . Parent=LTnewLM_230014300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_23 AUGUSTUS gene 296522 297475 1 - . ID=LTnewLM_230014400 LTnewLM_23 AUGUSTUS mRNA 296522 297475 1 - . ID=LTnewLM_230014400.1;Parent=LTnewLM_230014400 LTnewLM_23 AUGUSTUS CDS 296522 297475 1 - 0 ID=LTnewLM_230014400.1:CDS:1;Parent=LTnewLM_230014400.1 ### LTnewLM_23 . polypeptide 296522 297475 . - . ID=LTnewLM_230014400.1:pep;Derives_from=LTnewLM_230014400.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 304355 308419 1 - . ID=LTnewLM_230014500 LTnewLM_23 AUGUSTUS mRNA 304355 308419 1 - . ID=LTnewLM_230014500.1;Parent=LTnewLM_230014500 LTnewLM_23 AUGUSTUS CDS 304355 308419 1 - 0 ID=LTnewLM_230014500.1:CDS:1;Parent=LTnewLM_230014500.1 ### LTnewLM_23 . polypeptide 304355 308419 . - . ID=LTnewLM_230014500.1:pep;Derives_from=LTnewLM_230014500.1;orthologous_to=LmjF.23.0630_mRNA;ortholog_cluster=OG0002453;product=term%3DExocyst complex component Sec10%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07393;Ontology_term=GO:0005737,GO:0006887,GO:0048278 LTnewLM_23 Pfam protein_match 304379 305584 . - . Parent=LTnewLM_230014500.1:pep;Name=PF07393;signature_desc=Exocyst complex component Sec10;Ontology_term=GO:0006887,GO:0048278,GO:0005737 ### LTnewLM_23 AUGUSTUS gene 311434 313061 0.52 - . ID=LTnewLM_230014600 LTnewLM_23 AUGUSTUS mRNA 311434 313061 0.52 - . ID=LTnewLM_230014600.1;Parent=LTnewLM_230014600 LTnewLM_23 AUGUSTUS CDS 311434 312560 0.52 - 2 ID=LTnewLM_230014600.1:CDS:1;Parent=LTnewLM_230014600.1 LTnewLM_23 AUGUSTUS CDS 312620 313061 0.99 - 0 ID=LTnewLM_230014600.1:CDS:2;Parent=LTnewLM_230014600.1 ### LTnewLM_23 . polypeptide 311434 313061 . - . ID=LTnewLM_230014600.1:pep;Derives_from=LTnewLM_230014600.1;orthologous_to=LmjF.23.0640_mRNA;ortholog_cluster=OG0002454;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 314554 315207 1 - . ID=LTnewLM_230014700 LTnewLM_23 AUGUSTUS mRNA 314554 315207 1 - . ID=LTnewLM_230014700.1;Parent=LTnewLM_230014700 LTnewLM_23 AUGUSTUS CDS 314554 315207 1 - 0 ID=LTnewLM_230014700.1:CDS:1;Parent=LTnewLM_230014700.1 ### LTnewLM_23 . polypeptide 314554 315207 . - . ID=LTnewLM_230014700.1:pep;Derives_from=LTnewLM_230014700.1;orthologous_to=LmjF.23.0650_mRNA;ortholog_cluster=OG0002455;product=term%3DMitosis protein DIM1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02966;Ontology_term=GO:0007067,GO:0005681 LTnewLM_23 Pfam protein_match 314590 314880 . - . Parent=LTnewLM_230014700.1:pep;Name=PF02966;signature_desc=Mitosis protein DIM1;Ontology_term=GO:0007067,GO:0005681 ### LTnewLM_23 AUGUSTUS gene 317222 319879 1 - . ID=LTnewLM_230014800 LTnewLM_23 AUGUSTUS mRNA 317222 319879 1 - . ID=LTnewLM_230014800.1;Parent=LTnewLM_230014800 LTnewLM_23 AUGUSTUS CDS 317222 319879 1 - 0 ID=LTnewLM_230014800.1:CDS:1;Parent=LTnewLM_230014800.1 ### LTnewLM_23 . polypeptide 317222 319879 . - . ID=LTnewLM_230014800.1:pep;Derives_from=LTnewLM_230014800.1;orthologous_to=LmjF.23.0660_mRNA;ortholog_cluster=OG0002456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 321502 322626 1 - . ID=LTnewLM_230014900 LTnewLM_23 AUGUSTUS mRNA 321502 322626 1 - . ID=LTnewLM_230014900.1;Parent=LTnewLM_230014900 LTnewLM_23 AUGUSTUS CDS 321502 322626 1 - 0 ID=LTnewLM_230014900.1:CDS:1;Parent=LTnewLM_230014900.1 ### LTnewLM_23 . polypeptide 321502 322626 . - . ID=LTnewLM_230014900.1:pep;Derives_from=LTnewLM_230014900.1;orthologous_to=LmjF.23.0670_mRNA;ortholog_cluster=OG0002457;product=term%3DOxidoreductase family%2C NAD-binding Rossmann fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01408;Ontology_term=GO:0016491 LTnewLM_23 Pfam protein_match 322243 322539 . - . Parent=LTnewLM_230014900.1:pep;Name=PF01408;signature_desc=Oxidoreductase family%2C NAD-binding Rossmann fold;Ontology_term=GO:0016491 ### LTnewLM_23 AUGUSTUS gene 324822 326876 1 - . ID=LTnewLM_230015000 LTnewLM_23 AUGUSTUS mRNA 324822 326876 1 - . ID=LTnewLM_230015000.1;Parent=LTnewLM_230015000 LTnewLM_23 AUGUSTUS CDS 324822 326876 1 - 0 ID=LTnewLM_230015000.1:CDS:1;Parent=LTnewLM_230015000.1 ### LTnewLM_23 . polypeptide 324822 326876 . - . ID=LTnewLM_230015000.1:pep;Derives_from=LTnewLM_230015000.1;orthologous_to=LmjF.23.0680_mRNA;ortholog_cluster=OG0002458;product=term%3DPrimase C terminal 2 (PriCT-2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08707;Ontology_term=GO:0016817 LTnewLM_23 Pfam protein_match 325038 325298 . - . Parent=LTnewLM_230015000.1:pep;Name=PF08707;signature_desc=Primase C terminal 2 (PriCT-2);Ontology_term=GO:0016817 ### LTnewLM_23 AUGUSTUS gene 330495 331820 1 - . ID=LTnewLM_230015100 LTnewLM_23 AUGUSTUS mRNA 330495 331820 1 - . ID=LTnewLM_230015100.1;Parent=LTnewLM_230015100 LTnewLM_23 AUGUSTUS CDS 330495 331820 1 - 0 ID=LTnewLM_230015100.1:CDS:1;Parent=LTnewLM_230015100.1 ### LTnewLM_23 . polypeptide 330495 331820 . - . ID=LTnewLM_230015100.1:pep;Derives_from=LTnewLM_230015100.1;orthologous_to=LmjF.23.0690_mRNA;ortholog_cluster=OG0002459;product=term%3DThiolase%2C N-terminal domain/Beta-ketoacyl synthase%2C N-terminal domain/Thiolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00108|Pfam:PF00109|Pfam:PF02803;Ontology_term=GO:0016747,GO:0008152 LTnewLM_23 Pfam protein_match 330582 330890 . - . Parent=LTnewLM_230015100.1:pep;Name=PF02803;signature_desc=Thiolase%2C C-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_23 Pfam protein_match 331002 331697 . - . Parent=LTnewLM_230015100.1:pep;Name=PF00108;signature_desc=Thiolase%2C N-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_23 Pfam protein_match 331317 331478 . - . Parent=LTnewLM_230015100.1:pep;Name=PF00109;signature_desc=Beta-ketoacyl synthase%2C N-terminal domain ### LTnewLM_23 AUGUSTUS gene 333143 333484 1 - . ID=LTnewLM_230015200 LTnewLM_23 AUGUSTUS mRNA 333143 333484 1 - . ID=LTnewLM_230015200.1;Parent=LTnewLM_230015200 LTnewLM_23 AUGUSTUS CDS 333143 333484 1 - 0 ID=LTnewLM_230015200.1:CDS:1;Parent=LTnewLM_230015200.1 ### LTnewLM_23 . polypeptide 333143 333484 . - . ID=LTnewLM_230015200.1:pep;Derives_from=LTnewLM_230015200.1;orthologous_to=LmjF.23.0700_mRNA;ortholog_cluster=OG0002460;product=term%3DCytochrome C oxidase copper chaperone (COX17)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05051;Ontology_term=GO:0016531,GO:0005758,GO:0005507,GO:0006825 LTnewLM_23 Pfam protein_match 333296 333385 . - . Parent=LTnewLM_230015200.1:pep;Name=PF05051;signature_desc=Cytochrome C oxidase copper chaperone (COX17);Ontology_term=GO:0005507,GO:0016531,GO:0006825,GO:0005758 ### LTnewLM_23 . pseudogene 337630 339719 . - . ID=LTnewLM_230015300:pseudogene;coverage=1.0;sequence_ID=0.969;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0710_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 337630 339719 . - . ID=LTnewLM_230015300.1;Parent=LTnewLM_230015300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 337630 339719 . - . ID=LTnewLM_230015300.1:pseudogenic_exon:1;Parent=LTnewLM_230015300.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 337630 339719 . - . ID=LTnewLM_230015300.1:pep;Derives_from=LTnewLM_230015300.1;orthologous_to=LTnewLM_230011000.1,LmjF.23.0540_mRNA,LmjF.23.0710_mRNA;ortholog_cluster=OG0000169;product=term%3DAcetyl-coenzyme A synthetase N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16177 LTnewLM_23 Pfam protein_match 339375 339554 . - . Parent=LTnewLM_230015300.1:pep;Name=PF16177;signature_desc=Acetyl-coenzyme A synthetase N-terminus ### LTnewLM_23 AUGUSTUS gene 347742 349556 1 - . ID=LTnewLM_230015400 LTnewLM_23 AUGUSTUS mRNA 347742 349556 1 - . ID=LTnewLM_230015400.1;Parent=LTnewLM_230015400 LTnewLM_23 AUGUSTUS CDS 347742 349556 1 - 0 ID=LTnewLM_230015400.1:CDS:1;Parent=LTnewLM_230015400.1 ### LTnewLM_23 . polypeptide 347742 349556 . - . ID=LTnewLM_230015400.1:pep;Derives_from=LTnewLM_230015400.1;orthologous_to=LmjF.23.0720_mRNA;ortholog_cluster=OG0002461;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_23 Pfam protein_match 348657 348866 . - . Parent=LTnewLM_230015400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_23 AUGUSTUS gene 363012 364811 1 - . ID=LTnewLM_230015500 LTnewLM_23 AUGUSTUS mRNA 363012 364811 1 - . ID=LTnewLM_230015500.1;Parent=LTnewLM_230015500 LTnewLM_23 AUGUSTUS CDS 363012 364811 1 - 0 ID=LTnewLM_230015500.1:CDS:1;Parent=LTnewLM_230015500.1 ### LTnewLM_23 . polypeptide 363012 364811 . - . ID=LTnewLM_230015500.1:pep;Derives_from=LTnewLM_230015500.1;orthologous_to=LmjF.23.0730_mRNA;ortholog_cluster=OG0002462;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_23 Pfam protein_match 364215 364421 . - . Parent=LTnewLM_230015500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_23 AUGUSTUS gene 369665 371239 1 - . ID=LTnewLM_230015600 LTnewLM_23 AUGUSTUS mRNA 369665 371239 1 - . ID=LTnewLM_230015600.1;Parent=LTnewLM_230015600 LTnewLM_23 AUGUSTUS CDS 369665 371239 1 - 0 ID=LTnewLM_230015600.1:CDS:1;Parent=LTnewLM_230015600.1 ### LTnewLM_23 . polypeptide 369665 371239 . - . ID=LTnewLM_230015600.1:pep;Derives_from=LTnewLM_230015600.1;orthologous_to=LmjF.23.0740_mRNA;ortholog_cluster=OG0002463;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_23 Pfam protein_match 370265 370426 . - . Parent=LTnewLM_230015600.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_23 . pseudogene 374229 376722 . - . ID=LTnewLM_230015700:pseudogene;coverage=0.984;sequence_ID=0.911;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0750_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 374229 376722 . - . ID=LTnewLM_230015700.1;Parent=LTnewLM_230015700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 374229 376722 . - . ID=LTnewLM_230015700.1:pseudogenic_exon:1;Parent=LTnewLM_230015700.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 374229 376722 . - . ID=LTnewLM_230015700.1:pep;Derives_from=LTnewLM_230015700.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 379205 380251 1 - . ID=LTnewLM_230015800 LTnewLM_23 AUGUSTUS mRNA 379205 380251 1 - . ID=LTnewLM_230015800.1;Parent=LTnewLM_230015800 LTnewLM_23 AUGUSTUS CDS 379205 380251 1 - 0 ID=LTnewLM_230015800.1:CDS:1;Parent=LTnewLM_230015800.1 ### LTnewLM_23 . polypeptide 379205 380251 . - . ID=LTnewLM_230015800.1:pep;Derives_from=LTnewLM_230015800.1;orthologous_to=LmjF.23.0760_mRNA;ortholog_cluster=OG0002464;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_23 Pfam protein_match 379244 379396 . - . Parent=LTnewLM_230015800.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein LTnewLM_23 Pfam protein_match 379985 380170 . - . Parent=LTnewLM_230015800.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_23 AUGUSTUS gene 381354 381728 1 - . ID=LTnewLM_230015900 LTnewLM_23 AUGUSTUS mRNA 381354 381728 1 - . ID=LTnewLM_230015900.1;Parent=LTnewLM_230015900 LTnewLM_23 AUGUSTUS CDS 381354 381728 1 - 0 ID=LTnewLM_230015900.1:CDS:1;Parent=LTnewLM_230015900.1 ### LTnewLM_23 . polypeptide 381354 381728 . - . ID=LTnewLM_230015900.1:pep;Derives_from=LTnewLM_230015900.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 382708 386934 1 - . ID=LTnewLM_230016000 LTnewLM_23 AUGUSTUS mRNA 382708 386934 1 - . ID=LTnewLM_230016000.1;Parent=LTnewLM_230016000 LTnewLM_23 AUGUSTUS CDS 382708 386934 1 - 0 ID=LTnewLM_230016000.1:CDS:1;Parent=LTnewLM_230016000.1 ### LTnewLM_23 . polypeptide 382708 386934 . - . ID=LTnewLM_230016000.1:pep;Derives_from=LTnewLM_230016000.1;orthologous_to=LmjF.23.0770_mRNA;ortholog_cluster=OG0002465;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 391939 394734 1 - . ID=LTnewLM_230016100 LTnewLM_23 AUGUSTUS mRNA 391939 394734 1 - . ID=LTnewLM_230016100.1;Parent=LTnewLM_230016100 LTnewLM_23 AUGUSTUS CDS 391939 394734 1 - 0 ID=LTnewLM_230016100.1:CDS:1;Parent=LTnewLM_230016100.1 ### LTnewLM_23 . polypeptide 391939 394734 . - . ID=LTnewLM_230016100.1:pep;Derives_from=LTnewLM_230016100.1;orthologous_to=LmjF.23.0780_mRNA;ortholog_cluster=OG0002466;product=term%3DPutative serine esterase (DUF676)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05057 LTnewLM_23 Pfam protein_match 393253 393666 . - . Parent=LTnewLM_230016100.1:pep;Name=PF05057;signature_desc=Putative serine esterase (DUF676) ### LTnewLM_23 AUGUSTUS gene 396480 399050 1 - . ID=LTnewLM_230016200 LTnewLM_23 AUGUSTUS mRNA 396480 399050 1 - . ID=LTnewLM_230016200.1;Parent=LTnewLM_230016200 LTnewLM_23 AUGUSTUS CDS 396480 399050 1 - 0 ID=LTnewLM_230016200.1:CDS:1;Parent=LTnewLM_230016200.1 ### LTnewLM_23 . polypeptide 396480 399050 . - . ID=LTnewLM_230016200.1:pep;Derives_from=LTnewLM_230016200.1;orthologous_to=LmjF.23.0790_mRNA;ortholog_cluster=OG0002467;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 396885 397334 . - . Parent=LTnewLM_230016200.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_23 AUGUSTUS gene 399735 400865 1 - . ID=LTnewLM_230016300 LTnewLM_23 AUGUSTUS mRNA 399735 400865 1 - . ID=LTnewLM_230016300.1;Parent=LTnewLM_230016300 LTnewLM_23 AUGUSTUS CDS 399735 400865 1 - 0 ID=LTnewLM_230016300.1:CDS:1;Parent=LTnewLM_230016300.1 ### LTnewLM_23 . polypeptide 399735 400865 . - . ID=LTnewLM_230016300.1:pep;Derives_from=LTnewLM_230016300.1;orthologous_to=LmjF.23.0800_mRNA;ortholog_cluster=OG0002468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 402295 403854 1 - . ID=LTnewLM_230016400 LTnewLM_23 AUGUSTUS mRNA 402295 403854 1 - . ID=LTnewLM_230016400.1;Parent=LTnewLM_230016400 LTnewLM_23 AUGUSTUS CDS 402295 403854 1 - 0 ID=LTnewLM_230016400.1:CDS:1;Parent=LTnewLM_230016400.1 ### LTnewLM_23 . polypeptide 402295 403854 . - . ID=LTnewLM_230016400.1:pep;Derives_from=LTnewLM_230016400.1;orthologous_to=LmjF.23.0810_mRNA;ortholog_cluster=OG0002469;product=term%3DFAD binding domain/FAD linked oxidases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565|Pfam:PF02913;Ontology_term=GO:0003824,GO:0016491,GO:0055114,GO:0008762,GO:0050660 LTnewLM_23 Pfam protein_match 402322 403122 . - . Parent=LTnewLM_230016400.1:pep;Name=PF02913;signature_desc=FAD linked oxidases%2C C-terminal domain;Ontology_term=GO:0003824,GO:0050660 LTnewLM_23 Pfam protein_match 403240 403644 . - . Parent=LTnewLM_230016400.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_23 AUGUSTUS gene 404777 406144 1 - . ID=LTnewLM_230016500 LTnewLM_23 AUGUSTUS mRNA 404777 406144 1 - . ID=LTnewLM_230016500.1;Parent=LTnewLM_230016500 LTnewLM_23 AUGUSTUS CDS 404777 406144 1 - 0 ID=LTnewLM_230016500.1:CDS:1;Parent=LTnewLM_230016500.1 ### LTnewLM_23 . polypeptide 404777 406144 . - . ID=LTnewLM_230016500.1:pep;Derives_from=LTnewLM_230016500.1;orthologous_to=LmjF.23.0820_mRNA;ortholog_cluster=OG0002470;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 404921 405082 . - . Parent=LTnewLM_230016500.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_23 AUGUSTUS gene 407849 412351 1 - . ID=LTnewLM_230016600 LTnewLM_23 AUGUSTUS mRNA 407849 412351 1 - . ID=LTnewLM_230016600.1;Parent=LTnewLM_230016600 LTnewLM_23 AUGUSTUS CDS 407849 412351 1 - 0 ID=LTnewLM_230016600.1:CDS:1;Parent=LTnewLM_230016600.1 ### LTnewLM_23 . polypeptide 407849 412351 . - . ID=LTnewLM_230016600.1:pep;Derives_from=LTnewLM_230016600.1;orthologous_to=LmjF.23.0830_mRNA;ortholog_cluster=OG0002471;product=term%3DSodium/hydrogen exchanger family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00999;Ontology_term=GO:0006812,GO:0015299,GO:0055085,GO:0016021 LTnewLM_23 Pfam protein_match 411062 412246 . - . Parent=LTnewLM_230016600.1:pep;Name=PF00999;signature_desc=Sodium/hydrogen exchanger family;Ontology_term=GO:0015299,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_23 AUGUSTUS gene 414989 416248 1 - . ID=LTnewLM_230016700 LTnewLM_23 AUGUSTUS mRNA 414989 416248 1 - . ID=LTnewLM_230016700.1;Parent=LTnewLM_230016700 LTnewLM_23 AUGUSTUS CDS 414989 416248 1 - 0 ID=LTnewLM_230016700.1:CDS:1;Parent=LTnewLM_230016700.1 ### LTnewLM_23 . polypeptide 414989 416248 . - . ID=LTnewLM_230016700.1:pep;Derives_from=LTnewLM_230016700.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 423478 423762 1 - . ID=LTnewLM_230016800 LTnewLM_23 AUGUSTUS mRNA 423478 423762 1 - . ID=LTnewLM_230016800.1;Parent=LTnewLM_230016800 LTnewLM_23 AUGUSTUS CDS 423478 423762 1 - 0 ID=LTnewLM_230016800.1:CDS:1;Parent=LTnewLM_230016800.1 ### LTnewLM_23 . polypeptide 423478 423762 . - . ID=LTnewLM_230016800.1:pep;Derives_from=LTnewLM_230016800.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 423898 425481 1 - . ID=LTnewLM_230016900 LTnewLM_23 AUGUSTUS mRNA 423898 425481 1 - . ID=LTnewLM_230016900.1;Parent=LTnewLM_230016900 LTnewLM_23 AUGUSTUS CDS 423898 425481 1 - 0 ID=LTnewLM_230016900.1:CDS:1;Parent=LTnewLM_230016900.1 ### LTnewLM_23 . polypeptide 423898 425481 . - . ID=LTnewLM_230016900.1:pep;Derives_from=LTnewLM_230016900.1;orthologous_to=LmjF.23.0840_mRNA;ortholog_cluster=OG0002472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . polypeptide 426462 426776 . - . ID=LTnewLM_230017000.1:pep;Derives_from=LTnewLM_230017000.1;orthologous_to=LTnewLM_230017000.2;ortholog_cluster=OG0002473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 426462 426923 1.67 - . ID=LTnewLM_230017000 LTnewLM_23 AUGUSTUS mRNA 426462 426776 0.67 - . ID=LTnewLM_230017000.1;Parent=LTnewLM_230017000 LTnewLM_23 AUGUSTUS CDS 426462 426776 0.67 - 0 ID=LTnewLM_230017000.1:CDS:1;Parent=LTnewLM_230017000.1 LTnewLM_23 AUGUSTUS mRNA 426462 426923 1 - . ID=LTnewLM_230017000.2;Parent=LTnewLM_230017000 LTnewLM_23 AUGUSTUS CDS 426462 426923 1 - 0 ID=LTnewLM_230017000.2:CDS:1;Parent=LTnewLM_230017000.2 ### LTnewLM_23 . polypeptide 426462 426923 . - . ID=LTnewLM_230017000.2:pep;Derives_from=LTnewLM_230017000.2;orthologous_to=LTnewLM_230017000.1;ortholog_cluster=OG0002473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 427245 427990 0.57 - . ID=LTnewLM_230017100 LTnewLM_23 AUGUSTUS mRNA 427245 427990 0.57 - . ID=LTnewLM_230017100.1;Parent=LTnewLM_230017100 LTnewLM_23 AUGUSTUS CDS 427245 427909 0.57 - 2 ID=LTnewLM_230017100.1:CDS:1;Parent=LTnewLM_230017100.1 LTnewLM_23 AUGUSTUS CDS 427981 427990 0.63 - 0 ID=LTnewLM_230017100.1:CDS:2;Parent=LTnewLM_230017100.1 ### LTnewLM_23 . polypeptide 427245 427990 . - . ID=LTnewLM_230017100.1:pep;Derives_from=LTnewLM_230017100.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 428052 429359 0.99 - . ID=LTnewLM_230017200 LTnewLM_23 AUGUSTUS mRNA 428052 429359 0.99 - . ID=LTnewLM_230017200.1;Parent=LTnewLM_230017200 LTnewLM_23 AUGUSTUS CDS 428052 429359 0.99 - 0 ID=LTnewLM_230017200.1:CDS:1;Parent=LTnewLM_230017200.1 ### LTnewLM_23 . polypeptide 428052 429359 . - . ID=LTnewLM_230017200.1:pep;Derives_from=LTnewLM_230017200.1;product=term%3Dhypothetical protein ### LTnewLM_23 . pseudogene 430667 433646 . - . ID=LTnewLM_230017300:pseudogene;coverage=1.0;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.0850_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 430667 433646 . - . ID=LTnewLM_230017300.1;Parent=LTnewLM_230017300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 430667 433646 . - . ID=LTnewLM_230017300.1:pseudogenic_exon:1;Parent=LTnewLM_230017300.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 430667 433646 . - . ID=LTnewLM_230017300.1:pep;Derives_from=LTnewLM_230017300.1;orthologous_to=LmjF.23.0850_mRNA;ortholog_cluster=OG0007517;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 434129 435151 1 - . ID=LTnewLM_230017400 LTnewLM_23 AUGUSTUS mRNA 434129 435151 1 - . ID=LTnewLM_230017400.1;Parent=LTnewLM_230017400 LTnewLM_23 AUGUSTUS CDS 434129 435151 1 - 0 ID=LTnewLM_230017400.1:CDS:1;Parent=LTnewLM_230017400.1 ### LTnewLM_23 . polypeptide 434129 435151 . - . ID=LTnewLM_230017400.1:pep;Derives_from=LTnewLM_230017400.1;orthologous_to=LmjF.23.0860_mRNA;ortholog_cluster=OG0002474;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491 LTnewLM_23 Pfam protein_match 434165 434533 . - . Parent=LTnewLM_230017400.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase LTnewLM_23 Pfam protein_match 434885 435064 . - . Parent=LTnewLM_230017400.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_23 Liftoff gene 437429 439174 . - . ID=LTnewLM_230017500;coverage=1.0;sequence_ID=0.950;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.23.0870_0 LTnewLM_23 Liftoff mRNA 437429 439174 . - . ID=LTnewLM_230017500.1;Parent=LTnewLM_230017500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_23 Liftoff CDS 437429 439174 . - 0 ID=LTnewLM_230017500.1:CDS:1;Parent=LTnewLM_230017500.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 437429 439174 . - . ID=LTnewLM_230017500.1:pep;Derives_from=LTnewLM_230017500.1;orthologous_to=LmjF.23.0870_mRNA;ortholog_cluster=OG0002475;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_23 Pfam protein_match 437459 437824 . - . Parent=LTnewLM_230017500.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal LTnewLM_23 Pfam protein_match 437927 438931 . - . Parent=LTnewLM_230017500.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain ### LTnewLM_23 AUGUSTUS gene 442343 443968 1 - . ID=LTnewLM_230017600 LTnewLM_23 AUGUSTUS mRNA 442343 443968 1 - . ID=LTnewLM_230017600.1;Parent=LTnewLM_230017600 LTnewLM_23 AUGUSTUS CDS 442343 443968 1 - 0 ID=LTnewLM_230017600.1:CDS:1;Parent=LTnewLM_230017600.1 ### LTnewLM_23 . polypeptide 442343 443968 . - . ID=LTnewLM_230017600.1:pep;Derives_from=LTnewLM_230017600.1;orthologous_to=LmjF.23.0880_mRNA;ortholog_cluster=OG0002476;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_23 Pfam protein_match 442373 442762 . - . Parent=LTnewLM_230017600.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal LTnewLM_23 Pfam protein_match 442817 443749 . - . Parent=LTnewLM_230017600.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain ### LTnewLM_23 AUGUSTUS gene 444760 445389 1 - . ID=LTnewLM_230017700 LTnewLM_23 AUGUSTUS mRNA 444760 445389 1 - . ID=LTnewLM_230017700.1;Parent=LTnewLM_230017700 LTnewLM_23 AUGUSTUS CDS 444760 445389 1 - 0 ID=LTnewLM_230017700.1:CDS:1;Parent=LTnewLM_230017700.1 ### LTnewLM_23 . polypeptide 444760 445389 . - . ID=LTnewLM_230017700.1:pep;Derives_from=LTnewLM_230017700.1;orthologous_to=LmjF.23.0890_mRNA;ortholog_cluster=OG0002477;product=term%3DPutative S-adenosyl-L-methionine-dependent methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02636 LTnewLM_23 Pfam protein_match 445042 445347 . - . Parent=LTnewLM_230017700.1:pep;Name=PF02636;signature_desc=Putative S-adenosyl-L-methionine-dependent methyltransferase ### LTnewLM_23 . polypeptide 446285 448401 . - . ID=LTnewLM_230017800.1:pep;Derives_from=LTnewLM_230017800.1;orthologous_to=LTnewLM_230017800.2,LTnewLM_230017800.3,LTnewLM_230017800.4,LmjF.23.0900_mRNA;ortholog_cluster=OG0000089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 446285 454449 2.18 - . ID=LTnewLM_230017800 LTnewLM_23 AUGUSTUS mRNA 446285 448401 0.53 - . ID=LTnewLM_230017800.1;Parent=LTnewLM_230017800 LTnewLM_23 AUGUSTUS CDS 446285 446491 0.83 - 0 ID=LTnewLM_230017800.1:CDS:1;Parent=LTnewLM_230017800.1 LTnewLM_23 AUGUSTUS CDS 446587 448401 0.53 - 0 ID=LTnewLM_230017800.1:CDS:2;Parent=LTnewLM_230017800.1 LTnewLM_23 AUGUSTUS mRNA 446285 454449 0.66 - . ID=LTnewLM_230017800.2;Parent=LTnewLM_230017800 LTnewLM_23 AUGUSTUS CDS 446285 446491 0.84 - 0 ID=LTnewLM_230017800.2:CDS:1;Parent=LTnewLM_230017800.2 LTnewLM_23 AUGUSTUS CDS 446587 454449 0.66 - 0 ID=LTnewLM_230017800.2:CDS:2;Parent=LTnewLM_230017800.2 LTnewLM_23 AUGUSTUS mRNA 450780 454449 0.55 - . ID=LTnewLM_230017800.3;Parent=LTnewLM_230017800 LTnewLM_23 AUGUSTUS CDS 450780 450856 0.75 - 2 ID=LTnewLM_230017800.3:CDS:1;Parent=LTnewLM_230017800.3 LTnewLM_23 AUGUSTUS CDS 450999 454449 0.61 - 0 ID=LTnewLM_230017800.3:CDS:2;Parent=LTnewLM_230017800.3 LTnewLM_23 AUGUSTUS mRNA 452205 454449 0.44 - . ID=LTnewLM_230017800.4;Parent=LTnewLM_230017800 LTnewLM_23 AUGUSTUS CDS 452205 452208 0.55 - 1 ID=LTnewLM_230017800.4:CDS:1;Parent=LTnewLM_230017800.4 LTnewLM_23 AUGUSTUS CDS 452318 454449 0.44 - 0 ID=LTnewLM_230017800.4:CDS:2;Parent=LTnewLM_230017800.4 ### LTnewLM_23 . polypeptide 446285 454449 . - . ID=LTnewLM_230017800.2:pep;Derives_from=LTnewLM_230017800.2;orthologous_to=LTnewLM_230017800.1,LTnewLM_230017800.3,LTnewLM_230017800.4,LmjF.23.0900_mRNA;ortholog_cluster=OG0000089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . polypeptide 450780 454449 . - . ID=LTnewLM_230017800.3:pep;Derives_from=LTnewLM_230017800.3;orthologous_to=LTnewLM_230017800.1,LTnewLM_230017800.2,LTnewLM_230017800.4,LmjF.23.0900_mRNA;ortholog_cluster=OG0000089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . polypeptide 452205 454449 . - . ID=LTnewLM_230017800.4:pep;Derives_from=LTnewLM_230017800.4;orthologous_to=LTnewLM_230017800.1,LTnewLM_230017800.2,LTnewLM_230017800.3,LmjF.23.0900_mRNA;ortholog_cluster=OG0000089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 455297 456661 0.83 - . ID=LTnewLM_230017900 LTnewLM_23 AUGUSTUS mRNA 455297 456661 0.83 - . ID=LTnewLM_230017900.1;Parent=LTnewLM_230017900 LTnewLM_23 AUGUSTUS CDS 455297 456661 0.83 - 0 ID=LTnewLM_230017900.1:CDS:1;Parent=LTnewLM_230017900.1 ### LTnewLM_23 . polypeptide 455297 456661 . - . ID=LTnewLM_230017900.1:pep;Derives_from=LTnewLM_230017900.1;orthologous_to=LTnewLM_250027000.1,LmjF.25.2050_mRNA;ortholog_cluster=OG0000387;product=term%3DHelicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00271 LTnewLM_23 Pfam protein_match 456215 456625 . - . Parent=LTnewLM_230017900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_23 AUGUSTUS gene 456735 460013 0.45 - . ID=LTnewLM_230018000 LTnewLM_23 AUGUSTUS mRNA 456735 460013 0.45 - . ID=LTnewLM_230018000.1;Parent=LTnewLM_230018000 LTnewLM_23 AUGUSTUS CDS 456735 459480 0.45 - 1 ID=LTnewLM_230018000.1:CDS:1;Parent=LTnewLM_230018000.1 LTnewLM_23 AUGUSTUS CDS 459535 460013 0.77 - 0 ID=LTnewLM_230018000.1:CDS:2;Parent=LTnewLM_230018000.1 ### LTnewLM_23 . polypeptide 456735 460013 . - . ID=LTnewLM_230018000.1:pep;Derives_from=LTnewLM_230018000.1;orthologous_to=LTnewLM_330025200.1,LmjF.30.1300_mRNA,LmjF.33.1700_mRNA;ortholog_cluster=OG0000170;product=term%3DSNF2-related domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176;Ontology_term=GO:0005524,GO:0003677 LTnewLM_23 Pfam protein_match 456915 458564 . - . Parent=LTnewLM_230018000.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 ### LTnewLM_23 AUGUSTUS gene 460907 461380 1 - . ID=LTnewLM_230018100 LTnewLM_23 AUGUSTUS mRNA 460907 461380 1 - . ID=LTnewLM_230018100.1;Parent=LTnewLM_230018100 LTnewLM_23 AUGUSTUS CDS 460907 461380 1 - 0 ID=LTnewLM_230018100.1:CDS:1;Parent=LTnewLM_230018100.1 ### LTnewLM_23 . polypeptide 460907 461380 . - . ID=LTnewLM_230018100.1:pep;Derives_from=LTnewLM_230018100.1;orthologous_to=LmjF.23.0940_mRNA;ortholog_cluster=OG0002478;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 462185 463882 1 - . ID=LTnewLM_230018200 LTnewLM_23 AUGUSTUS mRNA 462185 463882 1 - . ID=LTnewLM_230018200.1;Parent=LTnewLM_230018200 LTnewLM_23 AUGUSTUS CDS 462185 463882 1 - 0 ID=LTnewLM_230018200.1:CDS:1;Parent=LTnewLM_230018200.1 ### LTnewLM_23 . polypeptide 462185 463882 . - . ID=LTnewLM_230018200.1:pep;Derives_from=LTnewLM_230018200.1;orthologous_to=LmjF.23.0950_mRNA;ortholog_cluster=OG0002479;product=term%3DCytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_23 Pfam protein_match 462215 463153 . - . Parent=LTnewLM_230018200.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_23 AUGUSTUS gene 465378 467453 1 - . ID=LTnewLM_230018300 LTnewLM_23 AUGUSTUS mRNA 465378 467453 1 - . ID=LTnewLM_230018300.1;Parent=LTnewLM_230018300 LTnewLM_23 AUGUSTUS CDS 465378 467453 1 - 0 ID=LTnewLM_230018300.1:CDS:1;Parent=LTnewLM_230018300.1 ### LTnewLM_23 . polypeptide 465378 467453 . - . ID=LTnewLM_230018300.1:pep;Derives_from=LTnewLM_230018300.1;orthologous_to=LmjF.23.0960_mRNA;ortholog_cluster=OG0002480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 469419 470590 0.45 - . ID=LTnewLM_230018400 LTnewLM_23 AUGUSTUS mRNA 469419 470590 0.45 - . ID=LTnewLM_230018400.1;Parent=LTnewLM_230018400 LTnewLM_23 AUGUSTUS CDS 469419 470011 0.77 - 2 ID=LTnewLM_230018400.1:CDS:1;Parent=LTnewLM_230018400.1 LTnewLM_23 AUGUSTUS CDS 470113 470590 0.45 - 0 ID=LTnewLM_230018400.1:CDS:2;Parent=LTnewLM_230018400.1 ### LTnewLM_23 . polypeptide 469419 470590 . - . ID=LTnewLM_230018400.1:pep;Derives_from=LTnewLM_230018400.1;orthologous_to=LmjF.23.0970_mRNA;ortholog_cluster=OG0002481;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 473003 473923 1 - . ID=LTnewLM_230018500 LTnewLM_23 AUGUSTUS mRNA 473003 473923 1 - . ID=LTnewLM_230018500.1;Parent=LTnewLM_230018500 LTnewLM_23 AUGUSTUS CDS 473003 473923 1 - 0 ID=LTnewLM_230018500.1:CDS:1;Parent=LTnewLM_230018500.1 ### LTnewLM_23 . polypeptide 473003 473923 . - . ID=LTnewLM_230018500.1:pep;Derives_from=LTnewLM_230018500.1;orthologous_to=LmjF.23.0980_mRNA;ortholog_cluster=OG0002482;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 475701 477950 1 - . ID=LTnewLM_230018600 LTnewLM_23 AUGUSTUS mRNA 475701 477950 1 - . ID=LTnewLM_230018600.1;Parent=LTnewLM_230018600 LTnewLM_23 AUGUSTUS CDS 475701 477950 1 - 0 ID=LTnewLM_230018600.1:CDS:1;Parent=LTnewLM_230018600.1 ### LTnewLM_23 . polypeptide 475701 477950 . - . ID=LTnewLM_230018600.1:pep;Derives_from=LTnewLM_230018600.1;orthologous_to=LmjF.23.0990_mRNA;ortholog_cluster=OG0002483;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 480405 481103 1 - . ID=LTnewLM_230018700 LTnewLM_23 AUGUSTUS mRNA 480405 481103 1 - . ID=LTnewLM_230018700.1;Parent=LTnewLM_230018700 LTnewLM_23 AUGUSTUS CDS 480405 481103 1 - 0 ID=LTnewLM_230018700.1:CDS:1;Parent=LTnewLM_230018700.1 ### LTnewLM_23 . polypeptide 480405 481103 . - . ID=LTnewLM_230018700.1:pep;Derives_from=LTnewLM_230018700.1;orthologous_to=LmjF.23.1000_mRNA;ortholog_cluster=OG0002484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 484379 487699 1 - . ID=LTnewLM_230018800 LTnewLM_23 AUGUSTUS mRNA 484379 487699 1 - . ID=LTnewLM_230018800.1;Parent=LTnewLM_230018800 LTnewLM_23 AUGUSTUS CDS 484379 487699 1 - 0 ID=LTnewLM_230018800.1:CDS:1;Parent=LTnewLM_230018800.1 ### LTnewLM_23 . polypeptide 484379 487699 . - . ID=LTnewLM_230018800.1:pep;Derives_from=LTnewLM_230018800.1;orthologous_to=LmjF.23.1010_mRNA;ortholog_cluster=OG0002485;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 493456 493881 1 - . ID=LTnewLM_230018900 LTnewLM_23 AUGUSTUS mRNA 493456 493881 1 - . ID=LTnewLM_230018900.1;Parent=LTnewLM_230018900 LTnewLM_23 AUGUSTUS CDS 493456 493881 1 - 0 ID=LTnewLM_230018900.1:CDS:1;Parent=LTnewLM_230018900.1 ### LTnewLM_23 . polypeptide 493456 493881 . - . ID=LTnewLM_230018900.1:pep;Derives_from=LTnewLM_230018900.1;orthologous_to=LmjF.23.1020_mRNA;ortholog_cluster=OG0002486;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 496600 496821 1 - . ID=LTnewLM_230019000 LTnewLM_23 AUGUSTUS mRNA 496600 496821 1 - . ID=LTnewLM_230019000.1;Parent=LTnewLM_230019000 LTnewLM_23 AUGUSTUS CDS 496600 496821 1 - 0 ID=LTnewLM_230019000.1:CDS:1;Parent=LTnewLM_230019000.1 ### LTnewLM_23 . polypeptide 496600 496821 . - . ID=LTnewLM_230019000.1:pep;Derives_from=LTnewLM_230019000.1;orthologous_to=LmjF.23.1040_mRNA,LmjF.23.1082_mRNA,LmjF.23.1088_mRNA;ortholog_cluster=OG0000171;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 Liftoff gene 498089 498374 . - . ID=LTnewLM_230019100;coverage=0.893;sequence_ID=0.834;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1084_0 LTnewLM_23 Liftoff mRNA 498089 498374 . - . ID=LTnewLM_230019100.1;Parent=LTnewLM_230019100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 Liftoff CDS 498089 498374 . - 0 ID=LTnewLM_230019100.1:CDS:1;Parent=LTnewLM_230019100.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 498089 498374 . - . ID=LTnewLM_230019100.1:pep;Derives_from=LTnewLM_230019100.1;orthologous_to=LmjF.23.1075_mRNA,LmjF.23.1084_mRNA;ortholog_cluster=OG0000388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 Liftoff gene 498468 498641 . - . ID=LTnewLM_230019200;coverage=1.0;sequence_ID=0.913;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.23.1050_0 LTnewLM_23 Liftoff mRNA 498468 498641 . - . ID=LTnewLM_230019200.1;Parent=LTnewLM_230019200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_23 Liftoff CDS 498468 498641 . - 0 ID=LTnewLM_230019200.1:CDS:1;Parent=LTnewLM_230019200.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 498468 498641 . - . ID=LTnewLM_230019200.1:pep;Derives_from=LTnewLM_230019200.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 500228 502720 0.96 - . ID=LTnewLM_230019300 LTnewLM_23 AUGUSTUS mRNA 500228 502720 0.96 - . ID=LTnewLM_230019300.1;Parent=LTnewLM_230019300 LTnewLM_23 AUGUSTUS CDS 500228 500508 0.96 - 2 ID=LTnewLM_230019300.1:CDS:1;Parent=LTnewLM_230019300.1 LTnewLM_23 AUGUSTUS CDS 502558 502720 0.96 - 0 ID=LTnewLM_230019300.1:CDS:2;Parent=LTnewLM_230019300.1 ### LTnewLM_23 . polypeptide 500228 502720 . - . ID=LTnewLM_230019300.1:pep;Derives_from=LTnewLM_230019300.1;product=term%3Dhypothetical protein ### LTnewLM_23 . pseudogene 504313 504861 . - . ID=LTnewLM_230019400:pseudogene;coverage=0.988;sequence_ID=0.810;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1070_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 504313 504861 . - . ID=LTnewLM_230019400.1;Parent=LTnewLM_230019400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 504313 504861 . - . ID=LTnewLM_230019400.1:pseudogenic_exon:1;Parent=LTnewLM_230019400.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 504313 504861 . - . ID=LTnewLM_230019400.1:pep;Derives_from=LTnewLM_230019400.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 506197 507870 1 - . ID=LTnewLM_230019500 LTnewLM_23 AUGUSTUS mRNA 506197 507870 1 - . ID=LTnewLM_230019500.1;Parent=LTnewLM_230019500 LTnewLM_23 AUGUSTUS CDS 506197 507870 1 - 0 ID=LTnewLM_230019500.1:CDS:1;Parent=LTnewLM_230019500.1 ### LTnewLM_23 . polypeptide 506197 507870 . - . ID=LTnewLM_230019500.1:pep;Derives_from=LTnewLM_230019500.1;orthologous_to=LmjF.23.1025_mRNA;ortholog_cluster=OG0002487;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 509191 511269 1 - . ID=LTnewLM_230019600 LTnewLM_23 AUGUSTUS mRNA 509191 511269 1 - . ID=LTnewLM_230019600.1;Parent=LTnewLM_230019600 LTnewLM_23 AUGUSTUS CDS 509191 511269 1 - 0 ID=LTnewLM_230019600.1:CDS:1;Parent=LTnewLM_230019600.1 ### LTnewLM_23 . polypeptide 509191 511269 . - . ID=LTnewLM_230019600.1:pep;Derives_from=LTnewLM_230019600.1;orthologous_to=LmjF.23.1035_mRNA;ortholog_cluster=OG0002488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 511931 513280 1 - . ID=LTnewLM_230019700 LTnewLM_23 AUGUSTUS mRNA 511931 513280 1 - . ID=LTnewLM_230019700.1;Parent=LTnewLM_230019700 LTnewLM_23 AUGUSTUS CDS 511931 513280 1 - 0 ID=LTnewLM_230019700.1:CDS:1;Parent=LTnewLM_230019700.1 ### LTnewLM_23 . polypeptide 511931 513280 . - . ID=LTnewLM_230019700.1:pep;Derives_from=LTnewLM_230019700.1;orthologous_to=LmjF.23.1045_mRNA;ortholog_cluster=OG0002489;product=term%3D5-formyltetrahydrofolate cyclo-ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01812 LTnewLM_23 Pfam protein_match 512264 512413 . - . Parent=LTnewLM_230019700.1:pep;Name=PF01812;signature_desc=5-formyltetrahydrofolate cyclo-ligase family ### LTnewLM_23 AUGUSTUS gene 514000 515262 1 - . ID=LTnewLM_230019800 LTnewLM_23 AUGUSTUS mRNA 514000 515262 1 - . ID=LTnewLM_230019800.1;Parent=LTnewLM_230019800 LTnewLM_23 AUGUSTUS CDS 514000 515262 1 - 0 ID=LTnewLM_230019800.1:CDS:1;Parent=LTnewLM_230019800.1 ### LTnewLM_23 . polypeptide 514000 515262 . - . ID=LTnewLM_230019800.1:pep;Derives_from=LTnewLM_230019800.1;orthologous_to=LmjF.23.1055_mRNA;ortholog_cluster=OG0002490;product=term%3DHIT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01230 LTnewLM_23 Pfam protein_match 514165 514476 . - . Parent=LTnewLM_230019800.1:pep;Name=PF01230;signature_desc=HIT domain ### LTnewLM_23 . pseudogene 515842 517307 . - . ID=LTnewLM_230019900:pseudogene;coverage=0.999;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1065_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 515842 517307 . - . ID=LTnewLM_230019900.1;Parent=LTnewLM_230019900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 515842 517307 . - . ID=LTnewLM_230019900.1:pseudogenic_exon:1;Parent=LTnewLM_230019900.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 515842 517307 . - . ID=LTnewLM_230019900.1:pep;Derives_from=LTnewLM_230019900.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 518097 520115 1 - . ID=LTnewLM_230020000 LTnewLM_23 AUGUSTUS mRNA 518097 520115 1 - . ID=LTnewLM_230020000.1;Parent=LTnewLM_230020000 LTnewLM_23 AUGUSTUS CDS 518097 520115 1 - 0 ID=LTnewLM_230020000.1:CDS:1;Parent=LTnewLM_230020000.1 ### LTnewLM_23 . polypeptide 518097 520115 . - . ID=LTnewLM_230020000.1:pep;Derives_from=LTnewLM_230020000.1;orthologous_to=LmjF.23.1090_mRNA;ortholog_cluster=OG0002491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 521576 523039 1 - . ID=LTnewLM_230020100 LTnewLM_23 AUGUSTUS mRNA 521576 523039 1 - . ID=LTnewLM_230020100.1;Parent=LTnewLM_230020100 LTnewLM_23 AUGUSTUS CDS 521576 523039 1 - 0 ID=LTnewLM_230020100.1:CDS:1;Parent=LTnewLM_230020100.1 ### LTnewLM_23 . polypeptide 521576 523039 . - . ID=LTnewLM_230020100.1:pep;Derives_from=LTnewLM_230020100.1;orthologous_to=LmjF.23.1100_mRNA;ortholog_cluster=OG0002492;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 524495 524767 0.95 - . ID=LTnewLM_230020200 LTnewLM_23 AUGUSTUS mRNA 524495 524767 0.95 - . ID=LTnewLM_230020200.1;Parent=LTnewLM_230020200 LTnewLM_23 AUGUSTUS CDS 524495 524767 0.95 - 0 ID=LTnewLM_230020200.1:CDS:1;Parent=LTnewLM_230020200.1 ### LTnewLM_23 . polypeptide 524495 524767 . - . ID=LTnewLM_230020200.1:pep;Derives_from=LTnewLM_230020200.1;product=term%3Dhypothetical protein ### LTnewLM_23 . polypeptide 525399 525827 . - . ID=LTnewLM_230020300.1:pep;Derives_from=LTnewLM_230020300.1;orthologous_to=LTnewLM_230020300.2;ortholog_cluster=OG0002493;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 525399 526066 1.57 - . ID=LTnewLM_230020300 LTnewLM_23 AUGUSTUS mRNA 525399 525827 0.92 - . ID=LTnewLM_230020300.1;Parent=LTnewLM_230020300 LTnewLM_23 AUGUSTUS CDS 525399 525827 0.92 - 0 ID=LTnewLM_230020300.1:CDS:1;Parent=LTnewLM_230020300.1 LTnewLM_23 AUGUSTUS mRNA 525399 526066 0.65 - . ID=LTnewLM_230020300.2;Parent=LTnewLM_230020300 LTnewLM_23 AUGUSTUS CDS 525399 525995 1 - 0 ID=LTnewLM_230020300.2:CDS:1;Parent=LTnewLM_230020300.2 LTnewLM_23 AUGUSTUS CDS 526058 526066 0.65 - 0 ID=LTnewLM_230020300.2:CDS:2;Parent=LTnewLM_230020300.2 ### LTnewLM_23 . polypeptide 525399 526066 . - . ID=LTnewLM_230020300.2:pep;Derives_from=LTnewLM_230020300.2;orthologous_to=LTnewLM_230020300.1;ortholog_cluster=OG0002493;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 528564 530936 0.99 - . ID=LTnewLM_230020400 LTnewLM_23 AUGUSTUS mRNA 528564 530936 0.99 - . ID=LTnewLM_230020400.1;Parent=LTnewLM_230020400 LTnewLM_23 AUGUSTUS CDS 528564 530936 0.99 - 0 ID=LTnewLM_230020400.1:CDS:1;Parent=LTnewLM_230020400.1 ### LTnewLM_23 . polypeptide 528564 530936 . - . ID=LTnewLM_230020400.1:pep;Derives_from=LTnewLM_230020400.1;orthologous_to=LmjF.23.1110_mRNA;ortholog_cluster=OG0002494;product=term%3DStealth protein CR2%2C conserved region 2/Stealth protein CR3%2C conserved region 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11380|Pfam:PF17102;Ontology_term=GO:0016772 LTnewLM_23 Pfam protein_match 529380 529532 . - . Parent=LTnewLM_230020400.1:pep;Name=PF17102;signature_desc=Stealth protein CR3%2C conserved region 3 LTnewLM_23 Pfam protein_match 529923 530183 . - . Parent=LTnewLM_230020400.1:pep;Name=PF11380;signature_desc=Stealth protein CR2%2C conserved region 2;Ontology_term=GO:0016772 ### LTnewLM_23 AUGUSTUS gene 532546 534522 1 - . ID=LTnewLM_230020500 LTnewLM_23 AUGUSTUS mRNA 532546 534522 1 - . ID=LTnewLM_230020500.1;Parent=LTnewLM_230020500 LTnewLM_23 AUGUSTUS CDS 532546 534522 1 - 0 ID=LTnewLM_230020500.1:CDS:1;Parent=LTnewLM_230020500.1 ### LTnewLM_23 . polypeptide 532546 534522 . - . ID=LTnewLM_230020500.1:pep;Derives_from=LTnewLM_230020500.1;orthologous_to=LmjF.23.1120_mRNA;ortholog_cluster=OG0002495;product=term%3DStealth protein CR2%2C conserved region 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11380;Ontology_term=GO:0016772 LTnewLM_23 Pfam protein_match 533785 534048 . - . Parent=LTnewLM_230020500.1:pep;Name=PF11380;signature_desc=Stealth protein CR2%2C conserved region 2;Ontology_term=GO:0016772 ### LTnewLM_23 AUGUSTUS gene 536376 537707 1 - . ID=LTnewLM_230020600 LTnewLM_23 AUGUSTUS mRNA 536376 537707 1 - . ID=LTnewLM_230020600.1;Parent=LTnewLM_230020600 LTnewLM_23 AUGUSTUS CDS 536376 537707 1 - 0 ID=LTnewLM_230020600.1:CDS:1;Parent=LTnewLM_230020600.1 ### LTnewLM_23 . polypeptide 536376 537707 . - . ID=LTnewLM_230020600.1:pep;Derives_from=LTnewLM_230020600.1;orthologous_to=LmjF.23.1130_mRNA;ortholog_cluster=OG0002496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 539347 543396 1 - . ID=LTnewLM_230020700 LTnewLM_23 AUGUSTUS mRNA 539347 543396 1 - . ID=LTnewLM_230020700.1;Parent=LTnewLM_230020700 LTnewLM_23 AUGUSTUS CDS 539347 543396 1 - 0 ID=LTnewLM_230020700.1:CDS:1;Parent=LTnewLM_230020700.1 ### LTnewLM_23 . polypeptide 539347 543396 . - . ID=LTnewLM_230020700.1:pep;Derives_from=LTnewLM_230020700.1;orthologous_to=LmjF.23.1140_mRNA;ortholog_cluster=OG0002497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 545770 547650 1 - . ID=LTnewLM_230020800 LTnewLM_23 AUGUSTUS mRNA 545770 547650 1 - . ID=LTnewLM_230020800.1;Parent=LTnewLM_230020800 LTnewLM_23 AUGUSTUS CDS 545770 547650 1 - 0 ID=LTnewLM_230020800.1:CDS:1;Parent=LTnewLM_230020800.1 ### LTnewLM_23 . polypeptide 545770 547650 . - . ID=LTnewLM_230020800.1:pep;Derives_from=LTnewLM_230020800.1;orthologous_to=LmjF.23.1150_mRNA;ortholog_cluster=OG0002498;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 548056 549456 0.45 - . ID=LTnewLM_230020900 LTnewLM_23 AUGUSTUS mRNA 548056 549456 0.45 - . ID=LTnewLM_230020900.1;Parent=LTnewLM_230020900 LTnewLM_23 AUGUSTUS CDS 548056 548199 0.47 - 0 ID=LTnewLM_230020900.1:CDS:1;Parent=LTnewLM_230020900.1 LTnewLM_23 AUGUSTUS CDS 548992 549456 0.52 - 0 ID=LTnewLM_230020900.1:CDS:2;Parent=LTnewLM_230020900.1 ### LTnewLM_23 . polypeptide 548056 549456 . - . ID=LTnewLM_230020900.1:pep;Derives_from=LTnewLM_230020900.1;orthologous_to=LmjF.23.1155_mRNA;ortholog_cluster=OG0002499;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 554844 555215 1 + . ID=LTnewLM_230021000 LTnewLM_23 AUGUSTUS mRNA 554844 555215 1 + . ID=LTnewLM_230021000.1;Parent=LTnewLM_230021000 LTnewLM_23 AUGUSTUS CDS 554844 555215 1 + 0 ID=LTnewLM_230021000.1:CDS:1;Parent=LTnewLM_230021000.1 ### LTnewLM_23 . polypeptide 554844 555215 . + . ID=LTnewLM_230021000.1:pep;Derives_from=LTnewLM_230021000.1;orthologous_to=LmjF.23.1160_mRNA;ortholog_cluster=OG0002500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 555499 557031 1 + . ID=LTnewLM_230021100 LTnewLM_23 AUGUSTUS mRNA 555499 557031 1 + . ID=LTnewLM_230021100.1;Parent=LTnewLM_230021100 LTnewLM_23 AUGUSTUS CDS 555499 557031 1 + 0 ID=LTnewLM_230021100.1:CDS:1;Parent=LTnewLM_230021100.1 ### LTnewLM_23 . polypeptide 555499 557031 . + . ID=LTnewLM_230021100.1:pep;Derives_from=LTnewLM_230021100.1;orthologous_to=LmjF.23.1165_mRNA;ortholog_cluster=OG0002501;product=term%3DDomain of unknown function (DUF1899)/WD domain%2C G-beta repeat/Type of WD40 repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08953|Pfam:PF00400|Pfam:PF16300;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 555502 555681 . + . Parent=LTnewLM_230021100.1:pep;Name=PF08953;signature_desc=Domain of unknown function (DUF1899) LTnewLM_23 Pfam protein_match 555847 555957 . + . Parent=LTnewLM_230021100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 556510 556632 . + . Parent=LTnewLM_230021100.1:pep;Name=PF16300;signature_desc=Type of WD40 repeat ### LTnewLM_23 AUGUSTUS gene 557975 559300 1 + . ID=LTnewLM_230021200 LTnewLM_23 AUGUSTUS mRNA 557975 559300 1 + . ID=LTnewLM_230021200.1;Parent=LTnewLM_230021200 LTnewLM_23 AUGUSTUS CDS 557975 559300 1 + 0 ID=LTnewLM_230021200.1:CDS:1;Parent=LTnewLM_230021200.1 ### LTnewLM_23 . polypeptide 557975 559300 . + . ID=LTnewLM_230021200.1:pep;Derives_from=LTnewLM_230021200.1;orthologous_to=LmjF.23.1190_mRNA;ortholog_cluster=OG0002502;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 559704 560069 1 + . ID=LTnewLM_230021300 LTnewLM_23 AUGUSTUS mRNA 559704 560069 1 + . ID=LTnewLM_230021300.1;Parent=LTnewLM_230021300 LTnewLM_23 AUGUSTUS CDS 559704 560069 1 + 0 ID=LTnewLM_230021300.1:CDS:1;Parent=LTnewLM_230021300.1 ### LTnewLM_23 . polypeptide 559704 560069 . + . ID=LTnewLM_230021300.1:pep;Derives_from=LTnewLM_230021300.1;orthologous_to=LmjF.23.1180_mRNA;ortholog_cluster=OG0002503;product=term%3DPutative transmembrane family 234%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10639 LTnewLM_23 Pfam protein_match 559716 560045 . + . Parent=LTnewLM_230021300.1:pep;Name=PF10639;signature_desc=Putative transmembrane family 234 ### LTnewLM_23 . pseudogene 560695 562321 . + . ID=LTnewLM_230021400:pseudogene;coverage=0.998;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1170_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 560695 562321 . + . ID=LTnewLM_230021400.1;Parent=LTnewLM_230021400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 560695 562321 . + . ID=LTnewLM_230021400.1:pseudogenic_exon:1;Parent=LTnewLM_230021400.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 560695 562321 . + . ID=LTnewLM_230021400.1:pep;Derives_from=LTnewLM_230021400.1;orthologous_to=LmjF.23.1170_mRNA;ortholog_cluster=OG0007518;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_23 Pfam protein_match 560866 561696 . + . Parent=LTnewLM_230021400.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_23 AUGUSTUS gene 564175 565644 1 + . ID=LTnewLM_230021500 LTnewLM_23 AUGUSTUS mRNA 564175 565644 1 + . ID=LTnewLM_230021500.1;Parent=LTnewLM_230021500 LTnewLM_23 AUGUSTUS CDS 564175 565644 1 + 0 ID=LTnewLM_230021500.1:CDS:1;Parent=LTnewLM_230021500.1 ### LTnewLM_23 . polypeptide 564175 565644 . + . ID=LTnewLM_230021500.1:pep;Derives_from=LTnewLM_230021500.1;orthologous_to=LTnewLM_140005000.1,LmjF.23.1200_mRNA;ortholog_cluster=OG0000327;product=term%3DMraW methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01795;Ontology_term=GO:0008168 LTnewLM_23 Pfam protein_match 564607 565365 . + . Parent=LTnewLM_230021500.1:pep;Name=PF01795;signature_desc=MraW methylase family;Ontology_term=GO:0008168 ### LTnewLM_23 AUGUSTUS gene 566636 567598 1 + . ID=LTnewLM_230021600 LTnewLM_23 AUGUSTUS mRNA 566636 567598 1 + . ID=LTnewLM_230021600.1;Parent=LTnewLM_230021600 LTnewLM_23 AUGUSTUS CDS 566636 567598 1 + 0 ID=LTnewLM_230021600.1:CDS:1;Parent=LTnewLM_230021600.1 ### LTnewLM_23 . polypeptide 566636 567598 . + . ID=LTnewLM_230021600.1:pep;Derives_from=LTnewLM_230021600.1;orthologous_to=LmjF.23.1210_mRNA;ortholog_cluster=OG0002504;product=term%3DSir2 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02146;Ontology_term=GO:0070403 LTnewLM_23 Pfam protein_match 566717 567397 . + . Parent=LTnewLM_230021600.1:pep;Name=PF02146;signature_desc=Sir2 family;Ontology_term=GO:0070403 ### LTnewLM_23 AUGUSTUS gene 568995 570650 1 + . ID=LTnewLM_230021700 LTnewLM_23 AUGUSTUS mRNA 568995 570650 1 + . ID=LTnewLM_230021700.1;Parent=LTnewLM_230021700 LTnewLM_23 AUGUSTUS CDS 568995 570650 1 + 0 ID=LTnewLM_230021700.1:CDS:1;Parent=LTnewLM_230021700.1 ### LTnewLM_23 . polypeptide 568995 570650 . + . ID=LTnewLM_230021700.1:pep;Derives_from=LTnewLM_230021700.1;orthologous_to=LmjF.23.1220_mRNA;ortholog_cluster=OG0002505;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_23 Pfam protein_match 569091 570566 . + . Parent=LTnewLM_230021700.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_23 . pseudogene 572545 573139 . + . ID=LTnewLM_230021800:pseudogene;coverage=0.988;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1230_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 572545 573139 . + . ID=LTnewLM_230021800.1;Parent=LTnewLM_230021800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 572545 573139 . + . ID=LTnewLM_230021800.1:pseudogenic_exon:1;Parent=LTnewLM_230021800.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 572545 573139 . + . ID=LTnewLM_230021800.1:pep;Derives_from=LTnewLM_230021800.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 574034 576458 0.8 + . ID=LTnewLM_230021900 LTnewLM_23 AUGUSTUS mRNA 574034 576458 0.8 + . ID=LTnewLM_230021900.1;Parent=LTnewLM_230021900 LTnewLM_23 AUGUSTUS CDS 574034 575790 0.81 + 0 ID=LTnewLM_230021900.1:CDS:1;Parent=LTnewLM_230021900.1 LTnewLM_23 AUGUSTUS CDS 575834 576458 0.96 + 1 ID=LTnewLM_230021900.1:CDS:2;Parent=LTnewLM_230021900.1 ### LTnewLM_23 . polypeptide 574034 576458 . + . ID=LTnewLM_230021900.1:pep;Derives_from=LTnewLM_230021900.1;orthologous_to=LmjF.23.1240_mRNA;ortholog_cluster=OG0002506;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 577804 581889 1 + . ID=LTnewLM_230022000 LTnewLM_23 AUGUSTUS mRNA 577804 581889 1 + . ID=LTnewLM_230022000.1;Parent=LTnewLM_230022000 LTnewLM_23 AUGUSTUS CDS 577804 581889 1 + 0 ID=LTnewLM_230022000.1:CDS:1;Parent=LTnewLM_230022000.1 ### LTnewLM_23 . polypeptide 577804 581889 . + . ID=LTnewLM_230022000.1:pep;Derives_from=LTnewLM_230022000.1;orthologous_to=LmjF.23.1250_mRNA;ortholog_cluster=OG0002507;product=term%3DFirst C2 domain of RPGR-interacting protein 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11618 LTnewLM_23 Pfam protein_match 579955 580380 . + . Parent=LTnewLM_230022000.1:pep;Name=PF11618;signature_desc=First C2 domain of RPGR-interacting protein 1 ### LTnewLM_23 AUGUSTUS gene 582644 583672 1 + . ID=LTnewLM_230022100 LTnewLM_23 AUGUSTUS mRNA 582644 583672 1 + . ID=LTnewLM_230022100.1;Parent=LTnewLM_230022100 LTnewLM_23 AUGUSTUS CDS 582644 583672 1 + 0 ID=LTnewLM_230022100.1:CDS:1;Parent=LTnewLM_230022100.1 ### LTnewLM_23 . polypeptide 582644 583672 . + . ID=LTnewLM_230022100.1:pep;Derives_from=LTnewLM_230022100.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 585196 589773 1 + . ID=LTnewLM_230022200 LTnewLM_23 AUGUSTUS mRNA 585196 589773 1 + . ID=LTnewLM_230022200.1;Parent=LTnewLM_230022200 LTnewLM_23 AUGUSTUS CDS 585196 589773 1 + 0 ID=LTnewLM_230022200.1:CDS:1;Parent=LTnewLM_230022200.1 ### LTnewLM_23 . polypeptide 585196 589773 . + . ID=LTnewLM_230022200.1:pep;Derives_from=LTnewLM_230022200.1;orthologous_to=LmjF.23.1260_mRNA;ortholog_cluster=OG0002508;product=term%3DRapamycin-insensitive companion of mTOR%2C N-term/Rapamycin-insensitive companion of mTOR%2C middle domain/Rapamycin-insensitive companion of mTOR RasGEF_N domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14664|Pfam:PF14666|Pfam:PF14663 LTnewLM_23 Pfam protein_match 586099 586956 . + . Parent=LTnewLM_230022200.1:pep;Name=PF14664;signature_desc=Rapamycin-insensitive companion of mTOR%2C N-term LTnewLM_23 Pfam protein_match 587536 587883 . + . Parent=LTnewLM_230022200.1:pep;Name=PF14666;signature_desc=Rapamycin-insensitive companion of mTOR%2C middle domain LTnewLM_23 Pfam protein_match 587914 588231 . + . Parent=LTnewLM_230022200.1:pep;Name=PF14663;signature_desc=Rapamycin-insensitive companion of mTOR RasGEF_N domain ### LTnewLM_23 AUGUSTUS gene 590594 591403 1 + . ID=LTnewLM_230022300 LTnewLM_23 AUGUSTUS mRNA 590594 591403 1 + . ID=LTnewLM_230022300.1;Parent=LTnewLM_230022300 LTnewLM_23 AUGUSTUS CDS 590594 591403 1 + 0 ID=LTnewLM_230022300.1:CDS:1;Parent=LTnewLM_230022300.1 ### LTnewLM_23 . polypeptide 590594 591403 . + . ID=LTnewLM_230022300.1:pep;Derives_from=LTnewLM_230022300.1;orthologous_to=LmjF.23.1263_mRNA;ortholog_cluster=OG0002509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 592373 593523 . + . ID=LTnewLM_230022400:pseudogene;coverage=1.0;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1267_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 592373 593523 . + . ID=LTnewLM_230022400.1;Parent=LTnewLM_230022400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 592373 593523 . + . ID=LTnewLM_230022400.1:pseudogenic_exon:1;Parent=LTnewLM_230022400.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 592373 593523 . + . ID=LTnewLM_230022400.1:pep;Derives_from=LTnewLM_230022400.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 594685 595776 0.94 + . ID=LTnewLM_230022500 LTnewLM_23 AUGUSTUS mRNA 594685 595776 0.94 + . ID=LTnewLM_230022500.1;Parent=LTnewLM_230022500 LTnewLM_23 AUGUSTUS CDS 594685 595590 0.97 + 0 ID=LTnewLM_230022500.1:CDS:1;Parent=LTnewLM_230022500.1 LTnewLM_23 AUGUSTUS CDS 595711 595776 0.94 + 0 ID=LTnewLM_230022500.1:CDS:2;Parent=LTnewLM_230022500.1 ### LTnewLM_23 . polypeptide 594685 595776 . + . ID=LTnewLM_230022500.1:pep;Derives_from=LTnewLM_230022500.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 597943 600990 1 + . ID=LTnewLM_230022600 LTnewLM_23 AUGUSTUS mRNA 597943 600990 1 + . ID=LTnewLM_230022600.1;Parent=LTnewLM_230022600 LTnewLM_23 AUGUSTUS CDS 597943 600990 1 + 0 ID=LTnewLM_230022600.1:CDS:1;Parent=LTnewLM_230022600.1 ### LTnewLM_23 . polypeptide 597943 600990 . + . ID=LTnewLM_230022600.1:pep;Derives_from=LTnewLM_230022600.1;orthologous_to=LmjF.23.1270_mRNA;ortholog_cluster=OG0002510;product=term%3DXPG N-terminal domain/XPG I-region%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00752|Pfam:PF00867;Ontology_term=GO:0004518,GO:0006281 LTnewLM_23 Pfam protein_match 597943 598059 . + . Parent=LTnewLM_230022600.1:pep;Name=PF00752;signature_desc=XPG N-terminal domain;Ontology_term=GO:0004518,GO:0006281 LTnewLM_23 Pfam protein_match 598231 598365 . + . Parent=LTnewLM_230022600.1:pep;Name=PF00752;signature_desc=XPG N-terminal domain;Ontology_term=GO:0004518,GO:0006281 LTnewLM_23 Pfam protein_match 598585 598737 . + . Parent=LTnewLM_230022600.1:pep;Name=PF00867;signature_desc=XPG I-region;Ontology_term=GO:0004518 ### LTnewLM_23 AUGUSTUS gene 603688 607593 1 + . ID=LTnewLM_230022700 LTnewLM_23 AUGUSTUS mRNA 603688 607593 1 + . ID=LTnewLM_230022700.1;Parent=LTnewLM_230022700 LTnewLM_23 AUGUSTUS CDS 603688 607593 1 + 0 ID=LTnewLM_230022700.1:CDS:1;Parent=LTnewLM_230022700.1 ### LTnewLM_23 . polypeptide 603688 607593 . + . ID=LTnewLM_230022700.1:pep;Derives_from=LTnewLM_230022700.1;orthologous_to=LmjF.23.1280_mRNA;ortholog_cluster=OG0002511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 611350 613419 1 + . ID=LTnewLM_230022800 LTnewLM_23 AUGUSTUS mRNA 611350 613419 1 + . ID=LTnewLM_230022800.1;Parent=LTnewLM_230022800 LTnewLM_23 AUGUSTUS CDS 611350 613419 1 + 0 ID=LTnewLM_230022800.1:CDS:1;Parent=LTnewLM_230022800.1 ### LTnewLM_23 . polypeptide 611350 613419 . + . ID=LTnewLM_230022800.1:pep;Derives_from=LTnewLM_230022800.1;orthologous_to=LmjF.23.1290_mRNA;ortholog_cluster=OG0002512;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 615748 616656 1 + . ID=LTnewLM_230022900 LTnewLM_23 AUGUSTUS mRNA 615748 616656 1 + . ID=LTnewLM_230022900.1;Parent=LTnewLM_230022900 LTnewLM_23 AUGUSTUS CDS 615748 616656 1 + 0 ID=LTnewLM_230022900.1:CDS:1;Parent=LTnewLM_230022900.1 ### LTnewLM_23 . polypeptide 615748 616656 . + . ID=LTnewLM_230022900.1:pep;Derives_from=LTnewLM_230022900.1;orthologous_to=LmjF.23.1300_mRNA;ortholog_cluster=OG0002513;product=term%3DFatty acid hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04116;Ontology_term=GO:0055114,GO:0005506,GO:0006633,GO:0016491 LTnewLM_23 Pfam protein_match 616114 616485 . + . Parent=LTnewLM_230022900.1:pep;Name=PF04116;signature_desc=Fatty acid hydroxylase;Ontology_term=GO:0005506,GO:0016491,GO:0006633,GO:0055114 ### LTnewLM_23 . pseudogene 619741 634016 . + . ID=LTnewLM_230023000:pseudogene;coverage=0.999;sequence_ID=0.971;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1310_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 619741 634016 . + . ID=LTnewLM_230023000.1;Parent=LTnewLM_230023000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 619741 634016 . + . ID=LTnewLM_230023000.1:pseudogenic_exon:1;Parent=LTnewLM_230023000.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 619741 634016 . + . ID=LTnewLM_230023000.1:pep;Derives_from=LTnewLM_230023000.1;orthologous_to=LmjF.23.1310_mRNA;ortholog_cluster=OG0007519;product=term%3DDynein heavy chain%2C N-terminal region 1/Dynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08385|Pfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857;Ontology_term=GO:0016887,GO:0005524 LTnewLM_23 Pfam protein_match 620566 622491 . + . Parent=LTnewLM_230023000.1:pep;Name=PF08385;signature_desc=Dynein heavy chain%2C N-terminal region 1 LTnewLM_23 Pfam protein_match 624094 625296 . + . Parent=LTnewLM_230023000.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_23 Pfam protein_match 625840 626817 . + . Parent=LTnewLM_230023000.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_23 Pfam protein_match 626785 627216 . + . Parent=LTnewLM_230023000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 627343 627723 . + . Parent=LTnewLM_230023000.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_23 Pfam protein_match 627754 628278 . + . Parent=LTnewLM_230023000.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_23 Pfam protein_match 627853 628200 . + . Parent=LTnewLM_230023000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_23 Pfam protein_match 628372 628638 . + . Parent=LTnewLM_230023000.1:pep;Name=PF17857;signature_desc=AAA+ lid domain ### LTnewLM_23 AUGUSTUS gene 635470 636039 1 + . ID=LTnewLM_230023100 LTnewLM_23 AUGUSTUS mRNA 635470 636039 1 + . ID=LTnewLM_230023100.1;Parent=LTnewLM_230023100 LTnewLM_23 AUGUSTUS CDS 635470 636039 1 + 0 ID=LTnewLM_230023100.1:CDS:1;Parent=LTnewLM_230023100.1 ### LTnewLM_23 . polypeptide 635470 636039 . + . ID=LTnewLM_230023100.1:pep;Derives_from=LTnewLM_230023100.1;orthologous_to=LmjF.23.1320_mRNA;ortholog_cluster=OG0002514;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 637224 646463 1 + . ID=LTnewLM_230023200 LTnewLM_23 AUGUSTUS mRNA 637224 646463 1 + . ID=LTnewLM_230023200.1;Parent=LTnewLM_230023200 LTnewLM_23 AUGUSTUS CDS 637224 646463 1 + 0 ID=LTnewLM_230023200.1:CDS:1;Parent=LTnewLM_230023200.1 ### LTnewLM_23 . polypeptide 637224 646463 . + . ID=LTnewLM_230023200.1:pep;Derives_from=LTnewLM_230023200.1;orthologous_to=LmjF.23.1330_mRNA;ortholog_cluster=OG0002515;product=term%3DDNA polymerase family B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00136;Ontology_term=GO:0000166,GO:0003677 LTnewLM_23 Pfam protein_match 643881 645260 . + . Parent=LTnewLM_230023200.1:pep;Name=PF00136;signature_desc=DNA polymerase family B;Ontology_term=GO:0000166,GO:0003677 ### LTnewLM_23 AUGUSTUS gene 647061 649397 1 + . ID=LTnewLM_230023300 LTnewLM_23 AUGUSTUS mRNA 647061 649397 1 + . ID=LTnewLM_230023300.1;Parent=LTnewLM_230023300 LTnewLM_23 AUGUSTUS CDS 647061 649397 1 + 0 ID=LTnewLM_230023300.1:CDS:1;Parent=LTnewLM_230023300.1 ### LTnewLM_23 . polypeptide 647061 649397 . + . ID=LTnewLM_230023300.1:pep;Derives_from=LTnewLM_230023300.1;orthologous_to=LmjF.23.1340_mRNA;ortholog_cluster=OG0002516;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 650275 652404 1 + . ID=LTnewLM_230023400 LTnewLM_23 AUGUSTUS mRNA 650275 652404 1 + . ID=LTnewLM_230023400.1;Parent=LTnewLM_230023400 LTnewLM_23 AUGUSTUS CDS 650275 652404 1 + 0 ID=LTnewLM_230023400.1:CDS:1;Parent=LTnewLM_230023400.1 ### LTnewLM_23 . polypeptide 650275 652404 . + . ID=LTnewLM_230023400.1:pep;Derives_from=LTnewLM_230023400.1;orthologous_to=LmjF.23.1350_mRNA;ortholog_cluster=OG0002517;product=term%3DRadical SAM superfamily/Radical_SAM C-terminal domain/Acetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04055|Pfam:PF16199|Pfam:PF00583;Ontology_term=GO:0003824,GO:0051536,GO:0008080 LTnewLM_23 Pfam protein_match 650911 651480 . + . Parent=LTnewLM_230023400.1:pep;Name=PF04055;signature_desc=Radical SAM superfamily;Ontology_term=GO:0003824,GO:0051536 LTnewLM_23 Pfam protein_match 651544 651795 . + . Parent=LTnewLM_230023400.1:pep;Name=PF16199;signature_desc=Radical_SAM C-terminal domain LTnewLM_23 Pfam protein_match 651844 652224 . + . Parent=LTnewLM_230023400.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_23 AUGUSTUS gene 653267 654547 1 + . ID=LTnewLM_230023500 LTnewLM_23 AUGUSTUS mRNA 653267 654547 1 + . ID=LTnewLM_230023500.1;Parent=LTnewLM_230023500 LTnewLM_23 AUGUSTUS CDS 653267 654547 1 + 0 ID=LTnewLM_230023500.1:CDS:1;Parent=LTnewLM_230023500.1 ### LTnewLM_23 . polypeptide 653267 654547 . + . ID=LTnewLM_230023500.1:pep;Derives_from=LTnewLM_230023500.1;orthologous_to=LmjF.23.1360_mRNA;ortholog_cluster=OG0002518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 654938 655252 0.58 + . ID=LTnewLM_230023600 LTnewLM_23 AUGUSTUS mRNA 654938 655252 0.58 + . ID=LTnewLM_230023600.1;Parent=LTnewLM_230023600 LTnewLM_23 AUGUSTUS CDS 654938 655252 0.58 + 0 ID=LTnewLM_230023600.1:CDS:1;Parent=LTnewLM_230023600.1 ### LTnewLM_23 . polypeptide 654938 655252 . + . ID=LTnewLM_230023600.1:pep;Derives_from=LTnewLM_230023600.1;orthologous_to=LTnewLM_290029200.1,LTnewLM_300035900.1,LTnewLM_330026600.1,LTnewLM_330027000.1,LTnewLM_350026400.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 657210 658409 1 + . ID=LTnewLM_230023700 LTnewLM_23 AUGUSTUS mRNA 657210 658409 1 + . ID=LTnewLM_230023700.1;Parent=LTnewLM_230023700 LTnewLM_23 AUGUSTUS CDS 657210 658409 1 + 0 ID=LTnewLM_230023700.1:CDS:1;Parent=LTnewLM_230023700.1 ### LTnewLM_23 . polypeptide 657210 658409 . + . ID=LTnewLM_230023700.1:pep;Derives_from=LTnewLM_230023700.1;orthologous_to=LmjF.23.1370_mRNA;ortholog_cluster=OG0002519;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_23 Pfam protein_match 657402 657704 . + . Parent=LTnewLM_230023700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_23 Pfam protein_match 657759 658001 . + . Parent=LTnewLM_230023700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_23 Pfam protein_match 658107 658364 . + . Parent=LTnewLM_230023700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_23 AUGUSTUS gene 661866 668600 1 + . ID=LTnewLM_230023800 LTnewLM_23 AUGUSTUS mRNA 661866 668600 1 + . ID=LTnewLM_230023800.1;Parent=LTnewLM_230023800 LTnewLM_23 AUGUSTUS CDS 661866 668600 1 + 0 ID=LTnewLM_230023800.1:CDS:1;Parent=LTnewLM_230023800.1 ### LTnewLM_23 . polypeptide 661866 668600 . + . ID=LTnewLM_230023800.1:pep;Derives_from=LTnewLM_230023800.1;orthologous_to=LmjF.23.1380_mRNA;ortholog_cluster=OG0002520;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helix-turn-helix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF20470;Ontology_term=GO:0003676,GO:0005524 LTnewLM_23 Pfam protein_match 665592 666056 . + . Parent=LTnewLM_230023800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_23 Pfam protein_match 666699 666938 . + . Parent=LTnewLM_230023800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_23 Pfam protein_match 666954 667112 . + . Parent=LTnewLM_230023800.1:pep;Name=PF20470;signature_desc=Helix-turn-helix domain ### LTnewLM_23 AUGUSTUS gene 669399 669896 1 + . ID=LTnewLM_230023900 LTnewLM_23 AUGUSTUS mRNA 669399 669896 1 + . ID=LTnewLM_230023900.1;Parent=LTnewLM_230023900 LTnewLM_23 AUGUSTUS CDS 669399 669896 1 + 0 ID=LTnewLM_230023900.1:CDS:1;Parent=LTnewLM_230023900.1 ### LTnewLM_23 . polypeptide 669399 669896 . + . ID=LTnewLM_230023900.1:pep;Derives_from=LTnewLM_230023900.1;orthologous_to=LmjF.23.1390_mRNA;ortholog_cluster=OG0002521;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 670535 671176 1 + . ID=LTnewLM_230024000 LTnewLM_23 AUGUSTUS mRNA 670535 671176 1 + . ID=LTnewLM_230024000.1;Parent=LTnewLM_230024000 LTnewLM_23 AUGUSTUS CDS 670535 671176 1 + 0 ID=LTnewLM_230024000.1:CDS:1;Parent=LTnewLM_230024000.1 ### LTnewLM_23 . polypeptide 670535 671176 . + . ID=LTnewLM_230024000.1:pep;Derives_from=LTnewLM_230024000.1;orthologous_to=LmjF.23.1400_mRNA;ortholog_cluster=OG0002522;product=term%3DRan-interacting Mog1 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04603 LTnewLM_23 Pfam protein_match 670556 671032 . + . Parent=LTnewLM_230024000.1:pep;Name=PF04603;signature_desc=Ran-interacting Mog1 protein ### LTnewLM_23 AUGUSTUS gene 674824 675567 1 + . ID=LTnewLM_230024100 LTnewLM_23 AUGUSTUS mRNA 674824 675567 1 + . ID=LTnewLM_230024100.1;Parent=LTnewLM_230024100 LTnewLM_23 AUGUSTUS CDS 674824 675567 1 + 0 ID=LTnewLM_230024100.1:CDS:1;Parent=LTnewLM_230024100.1 ### LTnewLM_23 . polypeptide 674824 675567 . + . ID=LTnewLM_230024100.1:pep;Derives_from=LTnewLM_230024100.1;orthologous_to=LmjF.23.1410_mRNA;ortholog_cluster=OG0002523;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13085;Ontology_term=GO:0051536,GO:0009055 LTnewLM_23 Pfam protein_match 674920 675213 . + . Parent=LTnewLM_230024100.1:pep;Name=PF13085;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_23 AUGUSTUS gene 677866 678831 1 + . ID=LTnewLM_230024200 LTnewLM_23 AUGUSTUS mRNA 677866 678831 1 + . ID=LTnewLM_230024200.1;Parent=LTnewLM_230024200 LTnewLM_23 AUGUSTUS CDS 677866 678831 1 + 0 ID=LTnewLM_230024200.1:CDS:1;Parent=LTnewLM_230024200.1 ### LTnewLM_23 . polypeptide 677866 678831 . + . ID=LTnewLM_230024200.1:pep;Derives_from=LTnewLM_230024200.1;orthologous_to=LmjF.23.1420_mRNA;ortholog_cluster=OG0002524;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_23 Pfam protein_match 678232 678615 . + . Parent=LTnewLM_230024200.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_23 AUGUSTUS gene 679787 681262 1 + . ID=LTnewLM_230024300 LTnewLM_23 AUGUSTUS mRNA 679787 681262 1 + . ID=LTnewLM_230024300.1;Parent=LTnewLM_230024300 LTnewLM_23 AUGUSTUS CDS 679787 681262 1 + 0 ID=LTnewLM_230024300.1:CDS:1;Parent=LTnewLM_230024300.1 ### LTnewLM_23 . polypeptide 679787 681262 . + . ID=LTnewLM_230024300.1:pep;Derives_from=LTnewLM_230024300.1;orthologous_to=LmjF.23.1430_mRNA;ortholog_cluster=OG0002525;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_23 Pfam protein_match 680684 681034 . + . Parent=LTnewLM_230024300.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_23 AUGUSTUS gene 681740 682105 1 + . ID=LTnewLM_230024400 LTnewLM_23 AUGUSTUS mRNA 681740 682105 1 + . ID=LTnewLM_230024400.1;Parent=LTnewLM_230024400 LTnewLM_23 AUGUSTUS CDS 681740 682105 1 + 0 ID=LTnewLM_230024400.1:CDS:1;Parent=LTnewLM_230024400.1 ### LTnewLM_23 . polypeptide 681740 682105 . + . ID=LTnewLM_230024400.1:pep;Derives_from=LTnewLM_230024400.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 683389 685296 1 + . ID=LTnewLM_230024500 LTnewLM_23 AUGUSTUS mRNA 683389 685296 1 + . ID=LTnewLM_230024500.1;Parent=LTnewLM_230024500 LTnewLM_23 AUGUSTUS CDS 683389 685296 1 + 0 ID=LTnewLM_230024500.1:CDS:1;Parent=LTnewLM_230024500.1 ### LTnewLM_23 . polypeptide 683389 685296 . + . ID=LTnewLM_230024500.1:pep;Derives_from=LTnewLM_230024500.1;orthologous_to=LmjF.23.1670_mRNA;ortholog_cluster=OG0002526;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_23 Pfam protein_match 684547 684900 . + . Parent=LTnewLM_230024500.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_23 AUGUSTUS gene 686914 692088 1 + . ID=LTnewLM_230024600 LTnewLM_23 AUGUSTUS mRNA 686914 692088 1 + . ID=LTnewLM_230024600.1;Parent=LTnewLM_230024600 LTnewLM_23 AUGUSTUS CDS 686914 692088 1 + 0 ID=LTnewLM_230024600.1:CDS:1;Parent=LTnewLM_230024600.1 ### LTnewLM_23 . polypeptide 686914 692088 . + . ID=LTnewLM_230024600.1:pep;Derives_from=LTnewLM_230024600.1;orthologous_to=LmjF.23.1680_mRNA;ortholog_cluster=OG0002527;product=term%3DInositol hexakisphosphate%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14566 LTnewLM_23 Pfam protein_match 688681 689145 . + . Parent=LTnewLM_230024600.1:pep;Name=PF14566;signature_desc=Inositol hexakisphosphate LTnewLM_23 Pfam protein_match 689812 690282 . + . Parent=LTnewLM_230024600.1:pep;Name=PF14566;signature_desc=Inositol hexakisphosphate LTnewLM_23 Pfam protein_match 691162 691644 . + . Parent=LTnewLM_230024600.1:pep;Name=PF14566;signature_desc=Inositol hexakisphosphate ### LTnewLM_23 AUGUSTUS gene 693678 694535 1 + . ID=LTnewLM_230024700 LTnewLM_23 AUGUSTUS mRNA 693678 694535 1 + . ID=LTnewLM_230024700.1;Parent=LTnewLM_230024700 LTnewLM_23 AUGUSTUS CDS 693678 694535 1 + 0 ID=LTnewLM_230024700.1:CDS:1;Parent=LTnewLM_230024700.1 ### LTnewLM_23 . polypeptide 693678 694535 . + . ID=LTnewLM_230024700.1:pep;Derives_from=LTnewLM_230024700.1;orthologous_to=LmjF.23.1690_mRNA;ortholog_cluster=OG0002528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 695644 696362 0.91 + . ID=LTnewLM_230024800 LTnewLM_23 AUGUSTUS mRNA 695644 696362 0.91 + . ID=LTnewLM_230024800.1;Parent=LTnewLM_230024800 LTnewLM_23 AUGUSTUS CDS 695644 696069 0.91 + 0 ID=LTnewLM_230024800.1:CDS:1;Parent=LTnewLM_230024800.1 LTnewLM_23 AUGUSTUS CDS 696147 696362 1 + 0 ID=LTnewLM_230024800.1:CDS:2;Parent=LTnewLM_230024800.1 ### LTnewLM_23 . polypeptide 695644 696362 . + . ID=LTnewLM_230024800.1:pep;Derives_from=LTnewLM_230024800.1;orthologous_to=LmjF.23.1700_mRNA;ortholog_cluster=OG0002529;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 697115 699088 1 + . ID=LTnewLM_230024900 LTnewLM_23 AUGUSTUS mRNA 697115 699088 1 + . ID=LTnewLM_230024900.1;Parent=LTnewLM_230024900 LTnewLM_23 AUGUSTUS CDS 697115 699088 1 + 0 ID=LTnewLM_230024900.1:CDS:1;Parent=LTnewLM_230024900.1 ### LTnewLM_23 . polypeptide 697115 699088 . + . ID=LTnewLM_230024900.1:pep;Derives_from=LTnewLM_230024900.1;orthologous_to=LmjF.23.1710_mRNA;ortholog_cluster=OG0002530;product=term%3DCiliary basal body-associated%2C B9 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07162 LTnewLM_23 Pfam protein_match 698486 699058 . + . Parent=LTnewLM_230024900.1:pep;Name=PF07162;signature_desc=Ciliary basal body-associated%2C B9 protein ### LTnewLM_23 AUGUSTUS gene 699853 700245 1 + . ID=LTnewLM_230025000 LTnewLM_23 AUGUSTUS mRNA 699853 700245 1 + . ID=LTnewLM_230025000.1;Parent=LTnewLM_230025000 LTnewLM_23 AUGUSTUS CDS 699853 700245 1 + 0 ID=LTnewLM_230025000.1:CDS:1;Parent=LTnewLM_230025000.1 ### LTnewLM_23 . polypeptide 699853 700245 . + . ID=LTnewLM_230025000.1:pep;Derives_from=LTnewLM_230025000.1;orthologous_to=LmjF.23.1715_mRNA;ortholog_cluster=OG0002531;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 700945 701361 1 + . ID=LTnewLM_230025100 LTnewLM_23 AUGUSTUS mRNA 700945 701361 1 + . ID=LTnewLM_230025100.1;Parent=LTnewLM_230025100 LTnewLM_23 AUGUSTUS CDS 700945 701361 1 + 0 ID=LTnewLM_230025100.1:CDS:1;Parent=LTnewLM_230025100.1 ### LTnewLM_23 . polypeptide 700945 701361 . + . ID=LTnewLM_230025100.1:pep;Derives_from=LTnewLM_230025100.1;orthologous_to=LmjF.23.1720_mRNA;ortholog_cluster=OG0002532;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 702751 703956 . + . ID=LTnewLM_230025200:pseudogene;coverage=0.984;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1730_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 702751 703956 . + . ID=LTnewLM_230025200.1;Parent=LTnewLM_230025200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 702751 703956 . + . ID=LTnewLM_230025200.1:pseudogenic_exon:1;Parent=LTnewLM_230025200.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 702751 703956 . + . ID=LTnewLM_230025200.1:pep;Derives_from=LTnewLM_230025200.1;orthologous_to=LmjF.23.1730_mRNA;ortholog_cluster=OG0007520;product=term%3DRING-H2 zinc finger domain/Zinc finger%2C C3HC4 type (RING finger)/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12678|Pfam:PF00097|Pfam:PF13639;Ontology_term=GO:0005515,GO:0046872,GO:0008270 LTnewLM_23 Pfam protein_match 703714 703899 . + . Parent=LTnewLM_230025200.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 LTnewLM_23 Pfam protein_match 703717 703896 . + . Parent=LTnewLM_230025200.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_23 Pfam protein_match 703807 703899 . + . Parent=LTnewLM_230025200.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 ### LTnewLM_23 AUGUSTUS gene 704735 705487 1 + . ID=LTnewLM_230025300 LTnewLM_23 AUGUSTUS mRNA 704735 705487 1 + . ID=LTnewLM_230025300.1;Parent=LTnewLM_230025300 LTnewLM_23 AUGUSTUS CDS 704735 705487 1 + 0 ID=LTnewLM_230025300.1:CDS:1;Parent=LTnewLM_230025300.1 ### LTnewLM_23 . polypeptide 704735 705487 . + . ID=LTnewLM_230025300.1:pep;Derives_from=LTnewLM_230025300.1;orthologous_to=LmjF.23.1740_mRNA;ortholog_cluster=OG0002533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 706714 707562 1 + . ID=LTnewLM_230025400 LTnewLM_23 AUGUSTUS mRNA 706714 707562 1 + . ID=LTnewLM_230025400.1;Parent=LTnewLM_230025400 LTnewLM_23 AUGUSTUS CDS 706714 707562 1 + 0 ID=LTnewLM_230025400.1:CDS:1;Parent=LTnewLM_230025400.1 ### LTnewLM_23 . polypeptide 706714 707562 . + . ID=LTnewLM_230025400.1:pep;Derives_from=LTnewLM_230025400.1;orthologous_to=LmjF.23.1750_mRNA;ortholog_cluster=OG0002534;product=term%3DVesicle transport v-SNARE protein N-terminus/Snare region anchored in the vesicle membrane C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05008|Pfam:PF12352;Ontology_term=GO:0006886,GO:0016020 LTnewLM_23 Pfam protein_match 706798 707010 . + . Parent=LTnewLM_230025400.1:pep;Name=PF05008;signature_desc=Vesicle transport v-SNARE protein N-terminus;Ontology_term=GO:0006886,GO:0016020 LTnewLM_23 Pfam protein_match 707197 707364 . + . Parent=LTnewLM_230025400.1:pep;Name=PF12352;signature_desc=Snare region anchored in the vesicle membrane C-terminus ### LTnewLM_23 AUGUSTUS gene 708882 711440 1 + . ID=LTnewLM_230025500 LTnewLM_23 AUGUSTUS mRNA 708882 711440 1 + . ID=LTnewLM_230025500.1;Parent=LTnewLM_230025500 LTnewLM_23 AUGUSTUS CDS 708882 711440 1 + 0 ID=LTnewLM_230025500.1:CDS:1;Parent=LTnewLM_230025500.1 ### LTnewLM_23 . polypeptide 708882 711440 . + . ID=LTnewLM_230025500.1:pep;Derives_from=LTnewLM_230025500.1;orthologous_to=LmjF.23.1760_mRNA;ortholog_cluster=OG0002535;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 712980 713837 1 + . ID=LTnewLM_230025600 LTnewLM_23 AUGUSTUS mRNA 712980 713837 1 + . ID=LTnewLM_230025600.1;Parent=LTnewLM_230025600 LTnewLM_23 AUGUSTUS CDS 712980 713837 1 + 0 ID=LTnewLM_230025600.1:CDS:1;Parent=LTnewLM_230025600.1 ### LTnewLM_23 . polypeptide 712980 713837 . + . ID=LTnewLM_230025600.1:pep;Derives_from=LTnewLM_230025600.1;orthologous_to=LmjF.23.1770_mRNA;ortholog_cluster=OG0002536;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 716262 716876 1 + . ID=LTnewLM_230025700 LTnewLM_23 AUGUSTUS mRNA 716262 716876 1 + . ID=LTnewLM_230025700.1;Parent=LTnewLM_230025700 LTnewLM_23 AUGUSTUS CDS 716262 716876 1 + 0 ID=LTnewLM_230025700.1:CDS:1;Parent=LTnewLM_230025700.1 ### LTnewLM_23 . polypeptide 716262 716876 . + . ID=LTnewLM_230025700.1:pep;Derives_from=LTnewLM_230025700.1;orthologous_to=LmjF.23.1440_mRNA;ortholog_cluster=OG0002537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 720854 721533 . + . ID=LTnewLM_230025800:pseudogene;coverage=0.966;sequence_ID=0.648;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1445_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 720854 721533 . + . ID=LTnewLM_230025800.1;Parent=LTnewLM_230025800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 720854 721533 . + . ID=LTnewLM_230025800.1:pseudogenic_exon:1;Parent=LTnewLM_230025800.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 720854 721533 . + . ID=LTnewLM_230025800.1:pep;Derives_from=LTnewLM_230025800.1;orthologous_to=LmjF.23.1445_mRNA;ortholog_cluster=OG0007521;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 722197 723669 1 + . ID=LTnewLM_230025900 LTnewLM_23 AUGUSTUS mRNA 722197 723669 1 + . ID=LTnewLM_230025900.1;Parent=LTnewLM_230025900 LTnewLM_23 AUGUSTUS CDS 722197 723669 1 + 0 ID=LTnewLM_230025900.1:CDS:1;Parent=LTnewLM_230025900.1 ### LTnewLM_23 . polypeptide 722197 723669 . + . ID=LTnewLM_230025900.1:pep;Derives_from=LTnewLM_230025900.1;orthologous_to=LmjF.23.1450_mRNA;ortholog_cluster=OG0002538;product=term%3DTrichohyalin-plectin-homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13868 LTnewLM_23 Pfam protein_match 722593 723591 . + . Parent=LTnewLM_230025900.1:pep;Name=PF13868;signature_desc=Trichohyalin-plectin-homology domain ### LTnewLM_23 AUGUSTUS gene 725601 726026 1 + . ID=LTnewLM_230026000 LTnewLM_23 AUGUSTUS mRNA 725601 726026 1 + . ID=LTnewLM_230026000.1;Parent=LTnewLM_230026000 LTnewLM_23 AUGUSTUS CDS 725601 726026 1 + 0 ID=LTnewLM_230026000.1:CDS:1;Parent=LTnewLM_230026000.1 ### LTnewLM_23 . polypeptide 725601 726026 . + . ID=LTnewLM_230026000.1:pep;Derives_from=LTnewLM_230026000.1;product=term%3Dhypothetical protein ### LTnewLM_23 AUGUSTUS gene 727768 729339 1 + . ID=LTnewLM_230026100 LTnewLM_23 AUGUSTUS mRNA 727768 729339 1 + . ID=LTnewLM_230026100.1;Parent=LTnewLM_230026100 LTnewLM_23 AUGUSTUS CDS 727768 729339 1 + 0 ID=LTnewLM_230026100.1:CDS:1;Parent=LTnewLM_230026100.1 ### LTnewLM_23 . polypeptide 727768 729339 . + . ID=LTnewLM_230026100.1:pep;Derives_from=LTnewLM_230026100.1;orthologous_to=LmjF.23.1460_mRNA;ortholog_cluster=OG0002539;product=term%3DGAF domain/TIP41-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13185|Pfam:PF01590|Pfam:PF04176;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 727990 728316 . + . Parent=LTnewLM_230026100.1:pep;Name=PF13185;signature_desc=GAF domain;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 728041 728310 . + . Parent=LTnewLM_230026100.1:pep;Name=PF01590;signature_desc=GAF domain;Ontology_term=GO:0005515 LTnewLM_23 Pfam protein_match 728794 729162 . + . Parent=LTnewLM_230026100.1:pep;Name=PF04176;signature_desc=TIP41-like family ### LTnewLM_23 AUGUSTUS gene 730398 731060 1 + . ID=LTnewLM_230026200 LTnewLM_23 AUGUSTUS mRNA 730398 731060 1 + . ID=LTnewLM_230026200.1;Parent=LTnewLM_230026200 LTnewLM_23 AUGUSTUS CDS 730398 731060 1 + 0 ID=LTnewLM_230026200.1:CDS:1;Parent=LTnewLM_230026200.1 ### LTnewLM_23 . polypeptide 730398 731060 . + . ID=LTnewLM_230026200.1:pep;Derives_from=LTnewLM_230026200.1;orthologous_to=LmjF.23.1470_mRNA;ortholog_cluster=OG0002540;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 731773 732510 1 + . ID=LTnewLM_230026300 LTnewLM_23 AUGUSTUS mRNA 731773 732510 1 + . ID=LTnewLM_230026300.1;Parent=LTnewLM_230026300 LTnewLM_23 AUGUSTUS CDS 731773 732510 1 + 0 ID=LTnewLM_230026300.1:CDS:1;Parent=LTnewLM_230026300.1 ### LTnewLM_23 . polypeptide 731773 732510 . + . ID=LTnewLM_230026300.1:pep;Derives_from=LTnewLM_230026300.1;orthologous_to=LmjF.23.1480_mRNA;ortholog_cluster=OG0002541;product=term%3DAlanine racemase%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01168 LTnewLM_23 Pfam protein_match 731815 732486 . + . Parent=LTnewLM_230026300.1:pep;Name=PF01168;signature_desc=Alanine racemase%2C N-terminal domain ### LTnewLM_23 AUGUSTUS gene 733971 734888 1 + . ID=LTnewLM_230026400 LTnewLM_23 AUGUSTUS mRNA 733971 734888 1 + . ID=LTnewLM_230026400.1;Parent=LTnewLM_230026400 LTnewLM_23 AUGUSTUS CDS 733971 734888 1 + 0 ID=LTnewLM_230026400.1:CDS:1;Parent=LTnewLM_230026400.1 ### LTnewLM_23 . polypeptide 733971 734888 . + . ID=LTnewLM_230026400.1:pep;Derives_from=LTnewLM_230026400.1;orthologous_to=LmjF.23.1490_mRNA;ortholog_cluster=OG0002542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 735703 736068 1 + . ID=LTnewLM_230026500 LTnewLM_23 AUGUSTUS mRNA 735703 736068 1 + . ID=LTnewLM_230026500.1;Parent=LTnewLM_230026500 LTnewLM_23 AUGUSTUS CDS 735703 736068 1 + 0 ID=LTnewLM_230026500.1:CDS:1;Parent=LTnewLM_230026500.1 ### LTnewLM_23 . polypeptide 735703 736068 . + . ID=LTnewLM_230026500.1:pep;Derives_from=LTnewLM_230026500.1;orthologous_to=LTnewLM_310027500.1,LTnewLM_330022200.1,LTnewLM_330022200.2;ortholog_cluster=OG0000172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 . pseudogene 737453 739061 . + . ID=LTnewLM_230026600:pseudogene;coverage=0.993;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.23.1500_0;has_internal_stop=true LTnewLM_23 . pseudogenic_transcript 737453 739061 . + . ID=LTnewLM_230026600.1;Parent=LTnewLM_230026600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_23 . pseudogenic_exon 737453 739061 . + . ID=LTnewLM_230026600.1:pseudogenic_exon:1;Parent=LTnewLM_230026600.1;extra_copy_number=0 ### LTnewLM_23 . polypeptide 737453 739061 . + . ID=LTnewLM_230026600.1:pep;Derives_from=LTnewLM_230026600.1;orthologous_to=LmjF.23.1500_mRNA;ortholog_cluster=OG0007522;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 740003 742330 1 + . ID=LTnewLM_230026700 LTnewLM_23 AUGUSTUS mRNA 740003 742330 1 + . ID=LTnewLM_230026700.1;Parent=LTnewLM_230026700 LTnewLM_23 AUGUSTUS CDS 740003 742330 1 + 0 ID=LTnewLM_230026700.1:CDS:1;Parent=LTnewLM_230026700.1 ### LTnewLM_23 . polypeptide 740003 742330 . + . ID=LTnewLM_230026700.1:pep;Derives_from=LTnewLM_230026700.1;orthologous_to=LmjF.23.1510_mRNA;ortholog_cluster=OG0002543;product=term%3DV-type ATPase 116kDa subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01496;Ontology_term=GO:0033179,GO:0015991,GO:0015078 LTnewLM_23 Pfam protein_match 740099 740401 . + . Parent=LTnewLM_230026700.1:pep;Name=PF01496;signature_desc=V-type ATPase 116kDa subunit family;Ontology_term=GO:0015078,GO:0015991,GO:0033179 LTnewLM_23 Pfam protein_match 740441 742297 . + . Parent=LTnewLM_230026700.1:pep;Name=PF01496;signature_desc=V-type ATPase 116kDa subunit family;Ontology_term=GO:0015078,GO:0015991,GO:0033179 ### LTnewLM_23 AUGUSTUS gene 743653 744954 1 + . ID=LTnewLM_230026800 LTnewLM_23 AUGUSTUS mRNA 743653 744954 1 + . ID=LTnewLM_230026800.1;Parent=LTnewLM_230026800 LTnewLM_23 AUGUSTUS CDS 743653 744954 1 + 0 ID=LTnewLM_230026800.1:CDS:1;Parent=LTnewLM_230026800.1 ### LTnewLM_23 . polypeptide 743653 744954 . + . ID=LTnewLM_230026800.1:pep;Derives_from=LTnewLM_230026800.1;orthologous_to=LmjF.23.1520_mRNA;ortholog_cluster=OG0002544;product=term%3DUbiA prenyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01040;Ontology_term=GO:0004659,GO:0016021 LTnewLM_23 Pfam protein_match 744067 744777 . + . Parent=LTnewLM_230026800.1:pep;Name=PF01040;signature_desc=UbiA prenyltransferase family;Ontology_term=GO:0004659,GO:0016021 ### LTnewLM_23 AUGUSTUS gene 747633 750164 1 + . ID=LTnewLM_230026900 LTnewLM_23 AUGUSTUS mRNA 747633 750164 1 + . ID=LTnewLM_230026900.1;Parent=LTnewLM_230026900 LTnewLM_23 AUGUSTUS CDS 747633 750164 1 + 0 ID=LTnewLM_230026900.1:CDS:1;Parent=LTnewLM_230026900.1 ### LTnewLM_23 . polypeptide 747633 750164 . + . ID=LTnewLM_230026900.1:pep;Derives_from=LTnewLM_230026900.1;orthologous_to=LmjF.23.1530_mRNA;ortholog_cluster=OG0002545;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 751122 754019 1 + . ID=LTnewLM_230027000 LTnewLM_23 AUGUSTUS mRNA 751122 754019 1 + . ID=LTnewLM_230027000.1;Parent=LTnewLM_230027000 LTnewLM_23 AUGUSTUS CDS 751122 754019 1 + 0 ID=LTnewLM_230027000.1:CDS:1;Parent=LTnewLM_230027000.1 ### LTnewLM_23 . polypeptide 751122 754019 . + . ID=LTnewLM_230027000.1:pep;Derives_from=LTnewLM_230027000.1;orthologous_to=LmjF.23.1540_mRNA;ortholog_cluster=OG0002546;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 754945 757329 1 + . ID=LTnewLM_230027100 LTnewLM_23 AUGUSTUS mRNA 754945 757329 1 + . ID=LTnewLM_230027100.1;Parent=LTnewLM_230027100 LTnewLM_23 AUGUSTUS CDS 754945 757329 1 + 0 ID=LTnewLM_230027100.1:CDS:1;Parent=LTnewLM_230027100.1 ### LTnewLM_23 . polypeptide 754945 757329 . + . ID=LTnewLM_230027100.1:pep;Derives_from=LTnewLM_230027100.1;orthologous_to=LmjF.23.1550_mRNA;ortholog_cluster=OG0002547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 760353 760920 0.57 + . ID=LTnewLM_230027200 LTnewLM_23 AUGUSTUS mRNA 760353 760920 0.57 + . ID=LTnewLM_230027200.1;Parent=LTnewLM_230027200 LTnewLM_23 AUGUSTUS CDS 760353 760597 0.57 + 0 ID=LTnewLM_230027200.1:CDS:1;Parent=LTnewLM_230027200.1 LTnewLM_23 AUGUSTUS CDS 760644 760920 0.57 + 1 ID=LTnewLM_230027200.1:CDS:2;Parent=LTnewLM_230027200.1 ### LTnewLM_23 . polypeptide 760353 760920 . + . ID=LTnewLM_230027200.1:pep;Derives_from=LTnewLM_230027200.1;orthologous_to=LmjF.23.1560_mRNA;ortholog_cluster=OG0002548;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_23 AUGUSTUS gene 762013 764790 1 + . ID=LTnewLM_230027300 LTnewLM_23 AUGUSTUS mRNA 762013 764790 1 + . ID=LTnewLM_230027300.1;Parent=LTnewLM_230027300 LTnewLM_23 AUGUSTUS CDS 762013 764790 1 + 0 ID=LTnewLM_230027300.1:CDS:1;Parent=LTnewLM_230027300.1 ### LTnewLM_23 . polypeptide 762013 764790 . + . ID=LTnewLM_230027300.1:pep;Derives_from=LTnewLM_230027300.1;orthologous_to=LmjF.23.1570_mRNA;ortholog_cluster=OG0002549;product=term%3DBeige/BEACH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02138 LTnewLM_23 Pfam protein_match 762817 763635 . + . Parent=LTnewLM_230027300.1:pep;Name=PF02138;signature_desc=Beige/BEACH domain ### LTnewLM_23 AUGUSTUS gene 766000 766467 1 + . ID=LTnewLM_230027400 LTnewLM_23 AUGUSTUS mRNA 766000 766467 1 + . ID=LTnewLM_230027400.1;Parent=LTnewLM_230027400 LTnewLM_23 AUGUSTUS CDS 766000 766467 1 + 0 ID=LTnewLM_230027400.1:CDS:1;Parent=LTnewLM_230027400.1 ### LTnewLM_23 . polypeptide 766000 766467 . + . ID=LTnewLM_230027400.1:pep;Derives_from=LTnewLM_230027400.1;orthologous_to=LmjF.23.1580_mRNA;ortholog_cluster=OG0002550;product=term%3DNucleoside 2-deoxyribosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05014;Ontology_term=GO:0070694,GO:0009159,GO:0050144 LTnewLM_23 Pfam protein_match 766018 766386 . + . Parent=LTnewLM_230027400.1:pep;Name=PF05014;signature_desc=Nucleoside 2-deoxyribosyltransferase;Ontology_term=GO:0050144,GO:0070694,GO:0009159 ### LTnewLM_24 . contig 1 861383 . + . Name=LTnewLM_CTG000024 LTnewLM_24 . pseudogene 4417 7794 . + . ID=LTnewLM_240005000:pseudogene;coverage=0.990;sequence_ID=0.902;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.0010_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 4417 7794 . + . ID=LTnewLM_240005000.1;Parent=LTnewLM_240005000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 6339 7794 . + . ID=LTnewLM_240005000.1:pseudogenic_exon:1;Parent=LTnewLM_240005000.1;extra_copy_number=0 LTnewLM_24 . pseudogenic_transcript 6405 7794 . + . ID=LTnewLM_240005000.2;Parent=LTnewLM_240005000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 6439 7794 . + . ID=LTnewLM_240005000.2:pseudogenic_exon:1;Parent=LTnewLM_240005000.2;extra_copy_number=0 ### LTnewLM_24 . polypeptide 6339 7794 . + . ID=LTnewLM_240005000.1:pep;Derives_from=LTnewLM_240005000.1;product=term%3Dhypothetical protein ### LTnewLM_24 . polypeptide 6439 7794 . + . ID=LTnewLM_240005000.2:pep;Derives_from=LTnewLM_240005000.2;orthologous_to=LmjF.24.0010.1_mRNA,LmjF.24.0010.2_mRNA;ortholog_cluster=OG0000524;product=term%3DMitochondrial branched-chain alpha-ketoacid dehydrogenase kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10436 LTnewLM_24 Pfam protein_match 6751 7272 . + . Parent=LTnewLM_240005000.2:pep;Name=PF10436;signature_desc=Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase ### LTnewLM_24 AUGUSTUS gene 8472 9923 1 + . ID=LTnewLM_240005100 LTnewLM_24 AUGUSTUS mRNA 8472 9923 1 + . ID=LTnewLM_240005100.1;Parent=LTnewLM_240005100 LTnewLM_24 AUGUSTUS CDS 8472 9923 1 + 0 ID=LTnewLM_240005100.1:CDS:1;Parent=LTnewLM_240005100.1 ### LTnewLM_24 . polypeptide 8472 9923 . + . ID=LTnewLM_240005100.1:pep;Derives_from=LTnewLM_240005100.1;orthologous_to=LmjF.24.0020_mRNA;ortholog_cluster=OG0002551;product=term%3DANTH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07651;Ontology_term=GO:0005543 LTnewLM_24 Pfam protein_match 8559 9365 . + . Parent=LTnewLM_240005100.1:pep;Name=PF07651;signature_desc=ANTH domain;Ontology_term=GO:0005543 ### LTnewLM_24 AUGUSTUS gene 10389 10889 1 + . ID=LTnewLM_240005200 LTnewLM_24 AUGUSTUS mRNA 10389 10889 1 + . ID=LTnewLM_240005200.1;Parent=LTnewLM_240005200 LTnewLM_24 AUGUSTUS CDS 10389 10889 1 + 0 ID=LTnewLM_240005200.1:CDS:1;Parent=LTnewLM_240005200.1 ### LTnewLM_24 . polypeptide 10389 10889 . + . ID=LTnewLM_240005200.1:pep;Derives_from=LTnewLM_240005200.1;orthologous_to=LmjF.24.0030_mRNA;ortholog_cluster=OG0002552;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 11297 11797 1 + . ID=LTnewLM_240005300 LTnewLM_24 AUGUSTUS mRNA 11297 11797 1 + . ID=LTnewLM_240005300.1;Parent=LTnewLM_240005300 LTnewLM_24 AUGUSTUS CDS 11297 11797 1 + 0 ID=LTnewLM_240005300.1:CDS:1;Parent=LTnewLM_240005300.1 ### LTnewLM_24 . polypeptide 11297 11797 . + . ID=LTnewLM_240005300.1:pep;Derives_from=LTnewLM_240005300.1;orthologous_to=LTnewLM_320009600.1,LmjF.24.0040_mRNA;ortholog_cluster=OG0000389;product=term%3DRibosomal protein L22p/L17e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00237;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_24 Pfam protein_match 11345 11740 . + . Parent=LTnewLM_240005300.1:pep;Name=PF00237;signature_desc=Ribosomal protein L22p/L17e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_24 AUGUSTUS gene 12255 13655 1 + . ID=LTnewLM_240005400 LTnewLM_24 AUGUSTUS mRNA 12255 13655 1 + . ID=LTnewLM_240005400.1;Parent=LTnewLM_240005400 LTnewLM_24 AUGUSTUS CDS 12255 13655 1 + 0 ID=LTnewLM_240005400.1:CDS:1;Parent=LTnewLM_240005400.1 ### LTnewLM_24 . polypeptide 12255 13655 . + . ID=LTnewLM_240005400.1:pep;Derives_from=LTnewLM_240005400.1;orthologous_to=LmjF.24.0050_mRNA;ortholog_cluster=OG0002553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 14265 15509 . + . ID=LTnewLM_240005500:pseudogene;coverage=1.0;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0060_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 14265 15509 . + . ID=LTnewLM_240005500.1;Parent=LTnewLM_240005500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 14265 15509 . + . ID=LTnewLM_240005500.1:pseudogenic_exon:1;Parent=LTnewLM_240005500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 14265 15509 . + . ID=LTnewLM_240005500.1:pep;Derives_from=LTnewLM_240005500.1;orthologous_to=LmjF.24.0060_mRNA;ortholog_cluster=OG0007523;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 16398 17717 1 + . ID=LTnewLM_240005600 LTnewLM_24 AUGUSTUS mRNA 16398 17717 1 + . ID=LTnewLM_240005600.1;Parent=LTnewLM_240005600 LTnewLM_24 AUGUSTUS CDS 16398 17717 1 + 0 ID=LTnewLM_240005600.1:CDS:1;Parent=LTnewLM_240005600.1 ### LTnewLM_24 . polypeptide 16398 17717 . + . ID=LTnewLM_240005600.1:pep;Derives_from=LTnewLM_240005600.1;orthologous_to=LmjF.24.0070_mRNA;ortholog_cluster=OG0002554;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 18520 19956 1 + . ID=LTnewLM_240005700 LTnewLM_24 AUGUSTUS mRNA 18520 19956 1 + . ID=LTnewLM_240005700.1;Parent=LTnewLM_240005700 LTnewLM_24 AUGUSTUS CDS 18520 19956 1 + 0 ID=LTnewLM_240005700.1:CDS:1;Parent=LTnewLM_240005700.1 ### LTnewLM_24 . polypeptide 18520 19956 . + . ID=LTnewLM_240005700.1:pep;Derives_from=LTnewLM_240005700.1;orthologous_to=LmjF.24.0080_mRNA;ortholog_cluster=OG0002555;product=term%3DRing finger domain/Zinc finger%2C C3HC4 type (RING finger)/RING-type zinc-finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF00097|Pfam:PF13445;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_24 Pfam protein_match 19240 19332 . + . Parent=LTnewLM_240005700.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_24 Pfam protein_match 19240 19335 . + . Parent=LTnewLM_240005700.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_24 Pfam protein_match 19240 19338 . + . Parent=LTnewLM_240005700.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger ### LTnewLM_24 AUGUSTUS gene 20505 21191 1 + . ID=LTnewLM_240005800 LTnewLM_24 AUGUSTUS mRNA 20505 21191 1 + . ID=LTnewLM_240005800.1;Parent=LTnewLM_240005800 LTnewLM_24 AUGUSTUS CDS 20505 21191 1 + 0 ID=LTnewLM_240005800.1:CDS:1;Parent=LTnewLM_240005800.1 ### LTnewLM_24 . polypeptide 20505 21191 . + . ID=LTnewLM_240005800.1:pep;Derives_from=LTnewLM_240005800.1;orthologous_to=LmjF.24.0090_mRNA;ortholog_cluster=OG0002556;product=term%3DProtein of unknown function (DUF3592)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12158 LTnewLM_24 Pfam protein_match 20601 21035 . + . Parent=LTnewLM_240005800.1:pep;Name=PF12158;signature_desc=Protein of unknown function (DUF3592) ### LTnewLM_24 AUGUSTUS gene 22035 22874 1 + . ID=LTnewLM_240005900 LTnewLM_24 AUGUSTUS mRNA 22035 22874 1 + . ID=LTnewLM_240005900.1;Parent=LTnewLM_240005900 LTnewLM_24 AUGUSTUS CDS 22035 22874 1 + 0 ID=LTnewLM_240005900.1:CDS:1;Parent=LTnewLM_240005900.1 ### LTnewLM_24 . polypeptide 22035 22874 . + . ID=LTnewLM_240005900.1:pep;Derives_from=LTnewLM_240005900.1;orthologous_to=LmjF.24.0100_mRNA;ortholog_cluster=OG0002557;product=term%3DCalmodulin-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13864 LTnewLM_24 Pfam protein_match 22551 22841 . + . Parent=LTnewLM_240005900.1:pep;Name=PF13864;signature_desc=Calmodulin-binding ### LTnewLM_24 AUGUSTUS gene 23798 25114 1 + . ID=LTnewLM_240006000 LTnewLM_24 AUGUSTUS mRNA 23798 25114 1 + . ID=LTnewLM_240006000.1;Parent=LTnewLM_240006000 LTnewLM_24 AUGUSTUS CDS 23798 25114 1 + 0 ID=LTnewLM_240006000.1:CDS:1;Parent=LTnewLM_240006000.1 ### LTnewLM_24 . polypeptide 23798 25114 . + . ID=LTnewLM_240006000.1:pep;Derives_from=LTnewLM_240006000.1;orthologous_to=LmjF.24.0110_mRNA;ortholog_cluster=OG0002558;product=term%3DPoly A polymerase regulatory subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01358 LTnewLM_24 Pfam protein_match 23903 24514 . + . Parent=LTnewLM_240006000.1:pep;Name=PF01358;signature_desc=Poly A polymerase regulatory subunit ### LTnewLM_24 AUGUSTUS gene 25925 27592 1 + . ID=LTnewLM_240006100 LTnewLM_24 AUGUSTUS mRNA 25925 27592 1 + . ID=LTnewLM_240006100.1;Parent=LTnewLM_240006100 LTnewLM_24 AUGUSTUS CDS 25925 27592 1 + 0 ID=LTnewLM_240006100.1:CDS:1;Parent=LTnewLM_240006100.1 ### LTnewLM_24 . polypeptide 25925 27592 . + . ID=LTnewLM_240006100.1:pep;Derives_from=LTnewLM_240006100.1;orthologous_to=LmjF.24.0130_mRNA;ortholog_cluster=OG0002559;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 29511 30695 1 + . ID=LTnewLM_240006200 LTnewLM_24 AUGUSTUS mRNA 29511 30695 1 + . ID=LTnewLM_240006200.1;Parent=LTnewLM_240006200 LTnewLM_24 AUGUSTUS CDS 29511 30695 1 + 0 ID=LTnewLM_240006200.1:CDS:1;Parent=LTnewLM_240006200.1 ### LTnewLM_24 . polypeptide 29511 30695 . + . ID=LTnewLM_240006200.1:pep;Derives_from=LTnewLM_240006200.1;orthologous_to=LmjF.24.0140_mRNA;ortholog_cluster=OG0002560;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeat/Ankyrin repeats (3 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13857|Pfam:PF13606|Pfam:PF00023|Pfam:PF13637|Pfam:PF12796;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 29595 29750 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 29640 29723 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 29640 29729 . + . Parent=LTnewLM_240006200.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 29646 29795 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 29652 29912 . + . Parent=LTnewLM_240006200.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_24 Pfam protein_match 29742 29897 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 29943 30098 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 29943 30122 . + . Parent=LTnewLM_240006200.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_24 Pfam protein_match 30045 30197 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 30096 30260 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_24 Pfam protein_match 30135 30296 . + . Parent=LTnewLM_240006200.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_24 Pfam protein_match 30138 30221 . + . Parent=LTnewLM_240006200.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 30138 30230 . + . Parent=LTnewLM_240006200.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 31602 32264 1 + . ID=LTnewLM_240006300 LTnewLM_24 AUGUSTUS mRNA 31602 32264 1 + . ID=LTnewLM_240006300.1;Parent=LTnewLM_240006300 LTnewLM_24 AUGUSTUS CDS 31602 32264 1 + 0 ID=LTnewLM_240006300.1:CDS:1;Parent=LTnewLM_240006300.1 ### LTnewLM_24 . polypeptide 31602 32264 . + . ID=LTnewLM_240006300.1:pep;Derives_from=LTnewLM_240006300.1;orthologous_to=LmjF.24.0150_mRNA;ortholog_cluster=OG0002561;product=term%3DPeroxisomal biogenesis factor 11 (PEX11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05648;Ontology_term=GO:0016559,GO:0005779 LTnewLM_24 Pfam protein_match 31620 32018 . + . Parent=LTnewLM_240006300.1:pep;Name=PF05648;signature_desc=Peroxisomal biogenesis factor 11 (PEX11);Ontology_term=GO:0016559,GO:0005779 ### LTnewLM_24 AUGUSTUS gene 34010 34879 1 + . ID=LTnewLM_240006400 LTnewLM_24 AUGUSTUS mRNA 34010 34879 1 + . ID=LTnewLM_240006400.1;Parent=LTnewLM_240006400 LTnewLM_24 AUGUSTUS CDS 34010 34879 1 + 0 ID=LTnewLM_240006400.1:CDS:1;Parent=LTnewLM_240006400.1 ### LTnewLM_24 . polypeptide 34010 34879 . + . ID=LTnewLM_240006400.1:pep;Derives_from=LTnewLM_240006400.1;orthologous_to=LmjF.24.0160_mRNA;ortholog_cluster=OG0002562;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 35789 36511 1 + . ID=LTnewLM_240006500 LTnewLM_24 AUGUSTUS mRNA 35789 36511 1 + . ID=LTnewLM_240006500.1;Parent=LTnewLM_240006500 LTnewLM_24 AUGUSTUS CDS 35789 36511 1 + 0 ID=LTnewLM_240006500.1:CDS:1;Parent=LTnewLM_240006500.1 ### LTnewLM_24 . polypeptide 35789 36511 . + . ID=LTnewLM_240006500.1:pep;Derives_from=LTnewLM_240006500.1;orthologous_to=LmjF.24.0170_mRNA;ortholog_cluster=OG0002563;product=term%3DPhosducin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02114 LTnewLM_24 Pfam protein_match 36032 36469 . + . Parent=LTnewLM_240006500.1:pep;Name=PF02114;signature_desc=Phosducin ### LTnewLM_24 AUGUSTUS gene 37337 38944 1 + . ID=LTnewLM_240006600 LTnewLM_24 AUGUSTUS mRNA 37337 38944 1 + . ID=LTnewLM_240006600.1;Parent=LTnewLM_240006600 LTnewLM_24 AUGUSTUS CDS 37337 38944 1 + 0 ID=LTnewLM_240006600.1:CDS:1;Parent=LTnewLM_240006600.1 ### LTnewLM_24 . polypeptide 37337 38944 . + . ID=LTnewLM_240006600.1:pep;Derives_from=LTnewLM_240006600.1;orthologous_to=LmjF.24.0180_mRNA;ortholog_cluster=OG0002564;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_24 Pfam protein_match 38216 38647 . + . Parent=LTnewLM_240006600.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_24 AUGUSTUS gene 40022 42463 1 + . ID=LTnewLM_240006700 LTnewLM_24 AUGUSTUS mRNA 40022 42463 1 + . ID=LTnewLM_240006700.1;Parent=LTnewLM_240006700 LTnewLM_24 AUGUSTUS CDS 40022 42463 1 + 0 ID=LTnewLM_240006700.1:CDS:1;Parent=LTnewLM_240006700.1 ### LTnewLM_24 . polypeptide 40022 42463 . + . ID=LTnewLM_240006700.1:pep;Derives_from=LTnewLM_240006700.1;orthologous_to=LmjF.24.0190_mRNA;ortholog_cluster=OG0002565;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 45477 46399 . + . ID=LTnewLM_240006800:pseudogene;coverage=1.0;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0200_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 45477 46399 . + . ID=LTnewLM_240006800.1;Parent=LTnewLM_240006800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 45477 46399 . + . ID=LTnewLM_240006800.1:pseudogenic_exon:1;Parent=LTnewLM_240006800.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 45477 46399 . + . ID=LTnewLM_240006800.1:pep;Derives_from=LTnewLM_240006800.1;orthologous_to=LmjF.24.0200_mRNA;ortholog_cluster=OG0007524;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 47209 48210 1 + . ID=LTnewLM_240006900 LTnewLM_24 AUGUSTUS mRNA 47209 48210 1 + . ID=LTnewLM_240006900.1;Parent=LTnewLM_240006900 LTnewLM_24 AUGUSTUS CDS 47209 48210 1 + 0 ID=LTnewLM_240006900.1:CDS:1;Parent=LTnewLM_240006900.1 ### LTnewLM_24 . polypeptide 47209 48210 . + . ID=LTnewLM_240006900.1:pep;Derives_from=LTnewLM_240006900.1;orthologous_to=LmjF.24.0210_mRNA;ortholog_cluster=OG0002566;product=term%3DTranscription factor S-II (TFIIS)%2C central domain/Transcription factor S-II (TFIIS)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07500|Pfam:PF01096;Ontology_term=GO:0006351,GO:0003676,GO:0008270 LTnewLM_24 Pfam protein_match 47740 48027 . + . Parent=LTnewLM_240006900.1:pep;Name=PF07500;signature_desc=Transcription factor S-II (TFIIS)%2C central domain;Ontology_term=GO:0006351 LTnewLM_24 Pfam protein_match 48085 48198 . + . Parent=LTnewLM_240006900.1:pep;Name=PF01096;signature_desc=Transcription factor S-II (TFIIS);Ontology_term=GO:0003676,GO:0008270,GO:0006351 ### LTnewLM_24 AUGUSTUS gene 49197 50219 1 + . ID=LTnewLM_240007000 LTnewLM_24 AUGUSTUS mRNA 49197 50219 1 + . ID=LTnewLM_240007000.1;Parent=LTnewLM_240007000 LTnewLM_24 AUGUSTUS CDS 49197 50219 1 + 0 ID=LTnewLM_240007000.1:CDS:1;Parent=LTnewLM_240007000.1 ### LTnewLM_24 . polypeptide 49197 50219 . + . ID=LTnewLM_240007000.1:pep;Derives_from=LTnewLM_240007000.1;orthologous_to=LmjF.24.0220_mRNA;ortholog_cluster=OG0002567;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 52352 53983 1 + . ID=LTnewLM_240007100 LTnewLM_24 AUGUSTUS mRNA 52352 53983 1 + . ID=LTnewLM_240007100.1;Parent=LTnewLM_240007100 LTnewLM_24 AUGUSTUS CDS 52352 53983 1 + 0 ID=LTnewLM_240007100.1:CDS:1;Parent=LTnewLM_240007100.1 ### LTnewLM_24 . polypeptide 52352 53983 . + . ID=LTnewLM_240007100.1:pep;Derives_from=LTnewLM_240007100.1;orthologous_to=LmjF.24.0230_mRNA;ortholog_cluster=OG0002568;product=term%3DInner membrane component of T3SS%2C cytoplasmic domain/FHA domain/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16697|Pfam:PF00498|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0005515,GO:0006468,GO:0005524 LTnewLM_24 Pfam protein_match 52637 52786 . + . Parent=LTnewLM_240007100.1:pep;Name=PF16697;signature_desc=Inner membrane component of T3SS%2C cytoplasmic domain LTnewLM_24 Pfam protein_match 52640 52831 . + . Parent=LTnewLM_240007100.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 52937 53866 . + . Parent=LTnewLM_240007100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 52943 53851 . + . Parent=LTnewLM_240007100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_24 AUGUSTUS gene 55008 56411 1 + . ID=LTnewLM_240007200 LTnewLM_24 AUGUSTUS mRNA 55008 56411 1 + . ID=LTnewLM_240007200.1;Parent=LTnewLM_240007200 LTnewLM_24 AUGUSTUS CDS 55008 56411 1 + 0 ID=LTnewLM_240007200.1:CDS:1;Parent=LTnewLM_240007200.1 ### LTnewLM_24 . polypeptide 55008 56411 . + . ID=LTnewLM_240007200.1:pep;Derives_from=LTnewLM_240007200.1;orthologous_to=LmjF.24.0240_mRNA;ortholog_cluster=OG0002569;product=term%3DHistone-binding protein RBBP4 or subunit C of CAF1 complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12265 LTnewLM_24 Pfam protein_match 55137 55325 . + . Parent=LTnewLM_240007200.1:pep;Name=PF12265;signature_desc=Histone-binding protein RBBP4 or subunit C of CAF1 complex ### LTnewLM_24 AUGUSTUS gene 57390 59207 1 + . ID=LTnewLM_240007300 LTnewLM_24 AUGUSTUS mRNA 57390 59207 1 + . ID=LTnewLM_240007300.1;Parent=LTnewLM_240007300 LTnewLM_24 AUGUSTUS CDS 57390 59207 1 + 0 ID=LTnewLM_240007300.1:CDS:1;Parent=LTnewLM_240007300.1 ### LTnewLM_24 . polypeptide 57390 59207 . + . ID=LTnewLM_240007300.1:pep;Derives_from=LTnewLM_240007300.1;orthologous_to=LmjF.24.0250_mRNA;ortholog_cluster=OG0002570;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_24 Pfam protein_match 57483 58001 . + . Parent=LTnewLM_240007300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_24 Pfam protein_match 57519 57974 . + . Parent=LTnewLM_240007300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_24 Pfam protein_match 58236 58700 . + . Parent=LTnewLM_240007300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_24 AUGUSTUS gene 60278 69793 1 + . ID=LTnewLM_240007400 LTnewLM_24 AUGUSTUS mRNA 60278 69793 1 + . ID=LTnewLM_240007400.1;Parent=LTnewLM_240007400 LTnewLM_24 AUGUSTUS CDS 60278 69793 1 + 0 ID=LTnewLM_240007400.1:CDS:1;Parent=LTnewLM_240007400.1 ### LTnewLM_24 . polypeptide 60278 69793 . + . ID=LTnewLM_240007400.1:pep;Derives_from=LTnewLM_240007400.1;orthologous_to=LmjF.24.0260_mRNA;ortholog_cluster=OG0002571;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 70687 74910 . + . ID=LTnewLM_240007500;coverage=1.0;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0270_0 LTnewLM_24 Liftoff mRNA 70687 74910 . + . ID=LTnewLM_240007500.1;Parent=LTnewLM_240007500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 70687 74910 . + 0 ID=LTnewLM_240007500.1:CDS:1;Parent=LTnewLM_240007500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 70687 74910 . + . ID=LTnewLM_240007500.1:pep;Derives_from=LTnewLM_240007500.1;orthologous_to=LmjF.24.0270_mRNA;ortholog_cluster=OG0002572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 75755 77815 1 + . ID=LTnewLM_240007600 LTnewLM_24 AUGUSTUS mRNA 75755 77815 1 + . ID=LTnewLM_240007600.1;Parent=LTnewLM_240007600 LTnewLM_24 AUGUSTUS CDS 75755 77815 1 + 0 ID=LTnewLM_240007600.1:CDS:1;Parent=LTnewLM_240007600.1 ### LTnewLM_24 . polypeptide 75755 77815 . + . ID=LTnewLM_240007600.1:pep;Derives_from=LTnewLM_240007600.1;orthologous_to=LmjF.24.0280_mRNA;ortholog_cluster=OG0002573;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 76829 76930 . + . Parent=LTnewLM_240007600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 77294 77407 . + . Parent=LTnewLM_240007600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 82036 83193 1 + . ID=LTnewLM_240007700 LTnewLM_24 AUGUSTUS mRNA 82036 83193 1 + . ID=LTnewLM_240007700.1;Parent=LTnewLM_240007700 LTnewLM_24 AUGUSTUS CDS 82036 83193 1 + 0 ID=LTnewLM_240007700.1:CDS:1;Parent=LTnewLM_240007700.1 ### LTnewLM_24 . polypeptide 82036 83193 . + . ID=LTnewLM_240007700.1:pep;Derives_from=LTnewLM_240007700.1;orthologous_to=LmjF.24.0290_mRNA;ortholog_cluster=OG0002574;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 82546 82968 . + . Parent=LTnewLM_240007700.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 85412 90796 1 + . ID=LTnewLM_240007800 LTnewLM_24 AUGUSTUS mRNA 85412 90796 1 + . ID=LTnewLM_240007800.1;Parent=LTnewLM_240007800 LTnewLM_24 AUGUSTUS CDS 85412 90796 1 + 0 ID=LTnewLM_240007800.1:CDS:1;Parent=LTnewLM_240007800.1 ### LTnewLM_24 . polypeptide 85412 90796 . + . ID=LTnewLM_240007800.1:pep;Derives_from=LTnewLM_240007800.1;orthologous_to=LmjF.24.0300_mRNA;ortholog_cluster=OG0002575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 91781 92740 1 + . ID=LTnewLM_240007900 LTnewLM_24 AUGUSTUS mRNA 91781 92740 1 + . ID=LTnewLM_240007900.1;Parent=LTnewLM_240007900 LTnewLM_24 AUGUSTUS CDS 91781 92740 1 + 0 ID=LTnewLM_240007900.1:CDS:1;Parent=LTnewLM_240007900.1 ### LTnewLM_24 . polypeptide 91781 92740 . + . ID=LTnewLM_240007900.1:pep;Derives_from=LTnewLM_240007900.1;orthologous_to=LmjF.24.0310_mRNA;ortholog_cluster=OG0002576;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 95373 97022 1 + . ID=LTnewLM_240008000 LTnewLM_24 AUGUSTUS mRNA 95373 97022 1 + . ID=LTnewLM_240008000.1;Parent=LTnewLM_240008000 LTnewLM_24 AUGUSTUS CDS 95373 97022 1 + 0 ID=LTnewLM_240008000.1:CDS:1;Parent=LTnewLM_240008000.1 ### LTnewLM_24 . polypeptide 95373 97022 . + . ID=LTnewLM_240008000.1:pep;Derives_from=LTnewLM_240008000.1;orthologous_to=LmjF.24.0320_mRNA;ortholog_cluster=OG0002577;product=term%3DFumarate hydratase (Fumerase)/Fumarase C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05681|Pfam:PF05683;Ontology_term=GO:0016836,GO:0016829 LTnewLM_24 Pfam protein_match 95553 96371 . + . Parent=LTnewLM_240008000.1:pep;Name=PF05681;signature_desc=Fumarate hydratase (Fumerase);Ontology_term=GO:0016829 LTnewLM_24 Pfam protein_match 96396 97013 . + . Parent=LTnewLM_240008000.1:pep;Name=PF05683;signature_desc=Fumarase C-terminus;Ontology_term=GO:0016836 ### LTnewLM_24 AUGUSTUS gene 99295 102420 1 + . ID=LTnewLM_240008100 LTnewLM_24 AUGUSTUS mRNA 99295 102420 1 + . ID=LTnewLM_240008100.1;Parent=LTnewLM_240008100 LTnewLM_24 AUGUSTUS CDS 99295 102420 1 + 0 ID=LTnewLM_240008100.1:CDS:1;Parent=LTnewLM_240008100.1 ### LTnewLM_24 . polypeptide 99295 102420 . + . ID=LTnewLM_240008100.1:pep;Derives_from=LTnewLM_240008100.1;orthologous_to=LmjF.24.0330_mRNA;ortholog_cluster=OG0002578;product=term%3DMitochondrial small ribosomal subunit Rsm22%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09243;Ontology_term=GO:0006412,GO:0008168 LTnewLM_24 Pfam protein_match 100069 100239 . + . Parent=LTnewLM_240008100.1:pep;Name=PF09243;signature_desc=Mitochondrial small ribosomal subunit Rsm22;Ontology_term=GO:0008168,GO:0006412 LTnewLM_24 Pfam protein_match 100738 101118 . + . Parent=LTnewLM_240008100.1:pep;Name=PF09243;signature_desc=Mitochondrial small ribosomal subunit Rsm22;Ontology_term=GO:0008168,GO:0006412 ### LTnewLM_24 AUGUSTUS gene 103322 106255 1 + . ID=LTnewLM_240008200 LTnewLM_24 AUGUSTUS mRNA 103322 106255 1 + . ID=LTnewLM_240008200.1;Parent=LTnewLM_240008200 LTnewLM_24 AUGUSTUS CDS 103322 106255 1 + 0 ID=LTnewLM_240008200.1:CDS:1;Parent=LTnewLM_240008200.1 ### LTnewLM_24 . polypeptide 103322 106255 . + . ID=LTnewLM_240008200.1:pep;Derives_from=LTnewLM_240008200.1;orthologous_to=LmjF.24.0340_mRNA;ortholog_cluster=OG0002579;product=term%3DType I phosphodiesterase / nucleotide pyrophosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01663;Ontology_term=GO:0003824 LTnewLM_24 Pfam protein_match 104000 104254 . + . Parent=LTnewLM_240008200.1:pep;Name=PF01663;signature_desc=Type I phosphodiesterase / nucleotide pyrophosphatase;Ontology_term=GO:0003824 ### LTnewLM_24 AUGUSTUS gene 107194 107985 1 + . ID=LTnewLM_240008300 LTnewLM_24 AUGUSTUS mRNA 107194 107985 1 + . ID=LTnewLM_240008300.1;Parent=LTnewLM_240008300 LTnewLM_24 AUGUSTUS CDS 107194 107985 1 + 0 ID=LTnewLM_240008300.1:CDS:1;Parent=LTnewLM_240008300.1 ### LTnewLM_24 . polypeptide 107194 107985 . + . ID=LTnewLM_240008300.1:pep;Derives_from=LTnewLM_240008300.1;orthologous_to=LmjF.24.0350_mRNA;ortholog_cluster=OG0002580;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 110767 112632 2.26e+03 + . ID=LTnewLM_240008400:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;has_stop=true;Target=LmjF.24.0360:mRNA 1 601;original_prot_length=601 LTnewLM_24 . pseudogenic_transcript 110767 112632 . + . ID=LTnewLM_240008400.1;Parent=LTnewLM_240008400:pseudogene LTnewLM_24 . pseudogenic_exon 110767 110790 . + . ID=LTnewLM_240008400.1:pseudogenic_exon:1;Parent=LTnewLM_240008400.1 LTnewLM_24 . pseudogenic_exon 110793 110846 . + . ID=LTnewLM_240008400.1:pseudogenic_exon:2;Parent=LTnewLM_240008400.1 LTnewLM_24 . pseudogenic_exon 110849 110884 . + . ID=LTnewLM_240008400.1:pseudogenic_exon:3;Parent=LTnewLM_240008400.1 LTnewLM_24 . pseudogenic_exon 110886 110957 . + . ID=LTnewLM_240008400.1:pseudogenic_exon:4;Parent=LTnewLM_240008400.1 LTnewLM_24 . pseudogenic_exon 110959 112632 . + . ID=LTnewLM_240008400.1:pseudogenic_exon:5;Parent=LTnewLM_240008400.1 ### LTnewLM_24 . polypeptide 110767 112632 . + . ID=LTnewLM_240008400.1:pep;Derives_from=LTnewLM_240008400.1;orthologous_to=LTnewLM_240008600.1,LmjF.24.0360_mRNA;ortholog_cluster=OG0000525;product=term%3DNucleotide-sugar transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04142;Ontology_term=GO:0008643,GO:0000139,GO:0005351,GO:0016021 LTnewLM_24 Pfam protein_match 111721 112611 . + . Parent=LTnewLM_240008400.1:pep;Name=PF04142;signature_desc=Nucleotide-sugar transporter;Ontology_term=GO:0005351,GO:0008643,GO:0000139,GO:0016021 ### LTnewLM_24 AUGUSTUS gene 116364 116711 0.54 + . ID=LTnewLM_240008500 LTnewLM_24 AUGUSTUS mRNA 116364 116711 0.54 + . ID=LTnewLM_240008500.1;Parent=LTnewLM_240008500 LTnewLM_24 AUGUSTUS CDS 116364 116462 0.54 + 0 ID=LTnewLM_240008500.1:CDS:1;Parent=LTnewLM_240008500.1 LTnewLM_24 AUGUSTUS CDS 116511 116711 0.91 + 0 ID=LTnewLM_240008500.1:CDS:2;Parent=LTnewLM_240008500.1 ### LTnewLM_24 . polypeptide 116364 116711 . + . ID=LTnewLM_240008500.1:pep;Derives_from=LTnewLM_240008500.1;product=term%3Dhypothetical protein ### LTnewLM_24 . pseudogene 118354 120167 . + . ID=LTnewLM_240008600:pseudogene;coverage=0.997;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0360_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 118354 120167 . + . ID=LTnewLM_240008600.1;Parent=LTnewLM_240008600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 118354 120167 . + . ID=LTnewLM_240008600.1:pseudogenic_exon:1;Parent=LTnewLM_240008600.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 118354 120167 . + . ID=LTnewLM_240008600.1:pep;Derives_from=LTnewLM_240008600.1;orthologous_to=LTnewLM_240008400.1,LmjF.24.0360_mRNA;ortholog_cluster=OG0000525;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 125153 126448 1 + . ID=LTnewLM_240008700 LTnewLM_24 AUGUSTUS mRNA 125153 126448 1 + . ID=LTnewLM_240008700.1;Parent=LTnewLM_240008700 LTnewLM_24 AUGUSTUS CDS 125153 126448 1 + 0 ID=LTnewLM_240008700.1:CDS:1;Parent=LTnewLM_240008700.1 ### LTnewLM_24 . polypeptide 125153 126448 . + . ID=LTnewLM_240008700.1:pep;Derives_from=LTnewLM_240008700.1;orthologous_to=LmjF.24.0370_mRNA;ortholog_cluster=OG0002581;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_24 Pfam protein_match 125318 126427 . + . Parent=LTnewLM_240008700.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_24 AUGUSTUS gene 128691 131768 1 + . ID=LTnewLM_240008800 LTnewLM_24 AUGUSTUS mRNA 128691 131768 1 + . ID=LTnewLM_240008800.1;Parent=LTnewLM_240008800 LTnewLM_24 AUGUSTUS CDS 128691 131768 1 + 0 ID=LTnewLM_240008800.1:CDS:1;Parent=LTnewLM_240008800.1 ### LTnewLM_24 . polypeptide 128691 131768 . + . ID=LTnewLM_240008800.1:pep;Derives_from=LTnewLM_240008800.1;orthologous_to=LmjF.24.0380_mRNA;ortholog_cluster=OG0002582;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 134159 136027 1 + . ID=LTnewLM_240008900 LTnewLM_24 AUGUSTUS mRNA 134159 136027 1 + . ID=LTnewLM_240008900.1;Parent=LTnewLM_240008900 LTnewLM_24 AUGUSTUS CDS 134159 136027 1 + 0 ID=LTnewLM_240008900.1:CDS:1;Parent=LTnewLM_240008900.1 ### LTnewLM_24 . polypeptide 134159 136027 . + . ID=LTnewLM_240008900.1:pep;Derives_from=LTnewLM_240008900.1;orthologous_to=LmjF.24.0390_mRNA;ortholog_cluster=OG0002583;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 137342 139333 1 + . ID=LTnewLM_240009000 LTnewLM_24 AUGUSTUS mRNA 137342 139333 1 + . ID=LTnewLM_240009000.1;Parent=LTnewLM_240009000 LTnewLM_24 AUGUSTUS CDS 137342 139333 1 + 0 ID=LTnewLM_240009000.1:CDS:1;Parent=LTnewLM_240009000.1 ### LTnewLM_24 . polypeptide 137342 139333 . + . ID=LTnewLM_240009000.1:pep;Derives_from=LTnewLM_240009000.1;orthologous_to=LmjF.24.0400_mRNA;ortholog_cluster=OG0002584;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 141587 143859 0.47 + . ID=LTnewLM_240009100 LTnewLM_24 AUGUSTUS mRNA 141587 143859 0.47 + . ID=LTnewLM_240009100.1;Parent=LTnewLM_240009100 LTnewLM_24 AUGUSTUS CDS 141587 143648 0.67 + 0 ID=LTnewLM_240009100.1:CDS:1;Parent=LTnewLM_240009100.1 LTnewLM_24 AUGUSTUS CDS 143693 143859 0.47 + 2 ID=LTnewLM_240009100.1:CDS:2;Parent=LTnewLM_240009100.1 ### LTnewLM_24 . polypeptide 141587 143859 . + . ID=LTnewLM_240009100.1:pep;Derives_from=LTnewLM_240009100.1;orthologous_to=LmjF.24.0410_mRNA;ortholog_cluster=OG0002585;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 144849 145772 1 + . ID=LTnewLM_240009200 LTnewLM_24 AUGUSTUS mRNA 144849 145772 1 + . ID=LTnewLM_240009200.1;Parent=LTnewLM_240009200 LTnewLM_24 AUGUSTUS CDS 144849 145772 1 + 0 ID=LTnewLM_240009200.1:CDS:1;Parent=LTnewLM_240009200.1 ### LTnewLM_24 . polypeptide 144849 145772 . + . ID=LTnewLM_240009200.1:pep;Derives_from=LTnewLM_240009200.1;orthologous_to=LmjF.24.0420_mRNA;ortholog_cluster=OG0002586;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C family 1/Ubiquitin carboxyl-terminal hydrolases%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01088|Pfam:PF18031;Ontology_term=GO:0004843,GO:0005622,GO:0006511 LTnewLM_24 Pfam protein_match 144870 145460 . + . Parent=LTnewLM_240009200.1:pep;Name=PF01088;signature_desc=Ubiquitin carboxyl-terminal hydrolase%2C family 1;Ontology_term=GO:0004843,GO:0006511,GO:0005622 LTnewLM_24 Pfam protein_match 145635 145727 . + . Parent=LTnewLM_240009200.1:pep;Name=PF18031;signature_desc=Ubiquitin carboxyl-terminal hydrolases ### LTnewLM_24 . pseudogene 146940 150812 6.14e+03 + . ID=LTnewLM_240009300:pseudogene;has_internal_stop=false;has_frameshift=false;has_start=true;Target=LmjF.24.0430:mRNA 1 1291;original_prot_length=1293 LTnewLM_24 . pseudogenic_transcript 146940 150812 . + . ID=LTnewLM_240009300.1;Parent=LTnewLM_240009300:pseudogene LTnewLM_24 . pseudogenic_exon 146940 150812 . + . ID=LTnewLM_240009300.1:pseudogenic_exon:1;Parent=LTnewLM_240009300.1 ### LTnewLM_24 . polypeptide 146940 150812 . + . ID=LTnewLM_240009300.1:pep;Derives_from=LTnewLM_240009300.1;orthologous_to=LmjF.24.0430_mRNA;ortholog_cluster=OG0007525;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 153186 157310 1 + . ID=LTnewLM_240009400 LTnewLM_24 AUGUSTUS mRNA 153186 157310 1 + . ID=LTnewLM_240009400.1;Parent=LTnewLM_240009400 LTnewLM_24 AUGUSTUS CDS 153186 157310 1 + 0 ID=LTnewLM_240009400.1:CDS:1;Parent=LTnewLM_240009400.1 ### LTnewLM_24 . polypeptide 153186 157310 . + . ID=LTnewLM_240009400.1:pep;Derives_from=LTnewLM_240009400.1;orthologous_to=LTnewLM_220014300.1,LTnewLM_240009500.1,LmjF.22.0860_mRNA,LmjF.24.0440_mRNA,LmjF.24.0450_mRNA;ortholog_cluster=OG0000061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 160518 164639 1 + . ID=LTnewLM_240009500 LTnewLM_24 AUGUSTUS mRNA 160518 164639 1 + . ID=LTnewLM_240009500.1;Parent=LTnewLM_240009500 LTnewLM_24 AUGUSTUS CDS 160518 164639 1 + 0 ID=LTnewLM_240009500.1:CDS:1;Parent=LTnewLM_240009500.1 ### LTnewLM_24 . polypeptide 160518 164639 . + . ID=LTnewLM_240009500.1:pep;Derives_from=LTnewLM_240009500.1;orthologous_to=LTnewLM_220014300.1,LTnewLM_240009400.1,LmjF.22.0860_mRNA,LmjF.24.0440_mRNA,LmjF.24.0450_mRNA;ortholog_cluster=OG0000061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 166487 166764 0.67 + . ID=LTnewLM_240009600 LTnewLM_24 AUGUSTUS mRNA 166487 166764 0.67 + . ID=LTnewLM_240009600.1;Parent=LTnewLM_240009600 LTnewLM_24 AUGUSTUS CDS 166487 166491 0.69 + 0 ID=LTnewLM_240009600.1:CDS:1;Parent=LTnewLM_240009600.1 LTnewLM_24 AUGUSTUS CDS 166548 166764 0.67 + 1 ID=LTnewLM_240009600.1:CDS:2;Parent=LTnewLM_240009600.1 ### LTnewLM_24 . polypeptide 166487 166764 . + . ID=LTnewLM_240009600.1:pep;Derives_from=LTnewLM_240009600.1;orthologous_to=LTnewLM_280016400.1;ortholog_cluster=OG0002587;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 168068 168898 1 + . ID=LTnewLM_240009700 LTnewLM_24 AUGUSTUS mRNA 168068 168898 1 + . ID=LTnewLM_240009700.1;Parent=LTnewLM_240009700 LTnewLM_24 AUGUSTUS CDS 168068 168898 1 + 0 ID=LTnewLM_240009700.1:CDS:1;Parent=LTnewLM_240009700.1 ### LTnewLM_24 . polypeptide 168068 168898 . + . ID=LTnewLM_240009700.1:pep;Derives_from=LTnewLM_240009700.1;orthologous_to=LmjF.24.0460_mRNA;ortholog_cluster=OG0002588;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_24 Pfam protein_match 168101 168517 . + . Parent=LTnewLM_240009700.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_24 AUGUSTUS gene 169633 170898 1 + . ID=LTnewLM_240009800 LTnewLM_24 AUGUSTUS mRNA 169633 170898 1 + . ID=LTnewLM_240009800.1;Parent=LTnewLM_240009800 LTnewLM_24 AUGUSTUS CDS 169633 170898 1 + 0 ID=LTnewLM_240009800.1:CDS:1;Parent=LTnewLM_240009800.1 ### LTnewLM_24 . polypeptide 169633 170898 . + . ID=LTnewLM_240009800.1:pep;Derives_from=LTnewLM_240009800.1;orthologous_to=LmjF.24.0470_mRNA;ortholog_cluster=OG0002589;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 175838 179428 1 + . ID=LTnewLM_240009900 LTnewLM_24 AUGUSTUS mRNA 175838 179428 1 + . ID=LTnewLM_240009900.1;Parent=LTnewLM_240009900 LTnewLM_24 AUGUSTUS CDS 175838 179428 1 + 0 ID=LTnewLM_240009900.1:CDS:1;Parent=LTnewLM_240009900.1 ### LTnewLM_24 . polypeptide 175838 179428 . + . ID=LTnewLM_240009900.1:pep;Derives_from=LTnewLM_240009900.1;orthologous_to=LmjF.24.0480_mRNA;ortholog_cluster=OG0002590;product=term%3DKelch motif/Galactose oxidase%2C central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13854|Pfam:PF13418 LTnewLM_24 Pfam protein_match 176495 176602 . + . Parent=LTnewLM_240009900.1:pep;Name=PF13854;signature_desc=Kelch motif LTnewLM_24 Pfam protein_match 176501 176629 . + . Parent=LTnewLM_240009900.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 177386 177580 . + . Parent=LTnewLM_240009900.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain ### LTnewLM_24 AUGUSTUS gene 180950 186310 1 + . ID=LTnewLM_240010000 LTnewLM_24 AUGUSTUS mRNA 180950 186310 1 + . ID=LTnewLM_240010000.1;Parent=LTnewLM_240010000 LTnewLM_24 AUGUSTUS CDS 180950 186310 1 + 0 ID=LTnewLM_240010000.1:CDS:1;Parent=LTnewLM_240010000.1 ### LTnewLM_24 . polypeptide 180950 186310 . + . ID=LTnewLM_240010000.1:pep;Derives_from=LTnewLM_240010000.1;orthologous_to=LmjF.24.0490_mRNA;ortholog_cluster=OG0002591;product=term%3DLeucine Rich repeats (2 copies)/Leucine rich repeat/Leucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12799|Pfam:PF13855|Pfam:PF14580;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 181313 181420 . + . Parent=LTnewLM_240010000.1:pep;Name=PF12799;signature_desc=Leucine Rich repeats (2 copies) LTnewLM_24 Pfam protein_match 183743 183916 . + . Parent=LTnewLM_240010000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 184625 184795 . + . Parent=LTnewLM_240010000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 185624 185797 . + . Parent=LTnewLM_240010000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 185690 185977 . + . Parent=LTnewLM_240010000.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_24 AUGUSTUS gene 187338 188054 1 + . ID=LTnewLM_240010100 LTnewLM_24 AUGUSTUS mRNA 187338 188054 1 + . ID=LTnewLM_240010100.1;Parent=LTnewLM_240010100 LTnewLM_24 AUGUSTUS CDS 187338 188054 1 + 0 ID=LTnewLM_240010100.1:CDS:1;Parent=LTnewLM_240010100.1 ### LTnewLM_24 . polypeptide 187338 188054 . + . ID=LTnewLM_240010100.1:pep;Derives_from=LTnewLM_240010100.1;orthologous_to=LmjF.24.0500_mRNA;ortholog_cluster=OG0002592;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 188740 191073 1 + . ID=LTnewLM_240010200 LTnewLM_24 AUGUSTUS mRNA 188740 191073 1 + . ID=LTnewLM_240010200.1;Parent=LTnewLM_240010200 LTnewLM_24 AUGUSTUS CDS 188740 191073 1 + 0 ID=LTnewLM_240010200.1:CDS:1;Parent=LTnewLM_240010200.1 ### LTnewLM_24 . polypeptide 188740 191073 . + . ID=LTnewLM_240010200.1:pep;Derives_from=LTnewLM_240010200.1;orthologous_to=LmjF.24.0510_mRNA;ortholog_cluster=OG0002593;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 192527 194914 . + . ID=LTnewLM_240010300;coverage=1.0;sequence_ID=0.957;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0520_0 LTnewLM_24 Liftoff mRNA 192527 194914 . + . ID=LTnewLM_240010300.1;Parent=LTnewLM_240010300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 192527 194914 . + 0 ID=LTnewLM_240010300.1:CDS:1;Parent=LTnewLM_240010300.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 192527 194914 . + . ID=LTnewLM_240010300.1:pep;Derives_from=LTnewLM_240010300.1;orthologous_to=LmjF.24.0520_mRNA;ortholog_cluster=OG0002594;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_24 Pfam protein_match 192656 192847 . + . Parent=LTnewLM_240010300.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_24 AUGUSTUS gene 196937 197620 1 + . ID=LTnewLM_240010400 LTnewLM_24 AUGUSTUS mRNA 196937 197620 1 + . ID=LTnewLM_240010400.1;Parent=LTnewLM_240010400 LTnewLM_24 AUGUSTUS CDS 196937 197620 1 + 0 ID=LTnewLM_240010400.1:CDS:1;Parent=LTnewLM_240010400.1 ### LTnewLM_24 . polypeptide 196937 197620 . + . ID=LTnewLM_240010400.1:pep;Derives_from=LTnewLM_240010400.1;orthologous_to=LmjF.24.0530_mRNA;ortholog_cluster=OG0002595;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 198690 200378 1 + . ID=LTnewLM_240010500 LTnewLM_24 AUGUSTUS mRNA 198690 200378 1 + . ID=LTnewLM_240010500.1;Parent=LTnewLM_240010500 LTnewLM_24 AUGUSTUS CDS 198690 200378 1 + 0 ID=LTnewLM_240010500.1:CDS:1;Parent=LTnewLM_240010500.1 ### LTnewLM_24 . polypeptide 198690 200378 . + . ID=LTnewLM_240010500.1:pep;Derives_from=LTnewLM_240010500.1;orthologous_to=LmjF.24.0540_mRNA;ortholog_cluster=OG0002596;product=term%3DMethyltransferase TRM13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05206;Ontology_term=GO:0008033,GO:0008168 LTnewLM_24 Pfam protein_match 199638 200009 . + . Parent=LTnewLM_240010500.1:pep;Name=PF05206;signature_desc=Methyltransferase TRM13;Ontology_term=GO:0008168,GO:0008033 ### LTnewLM_24 AUGUSTUS gene 201501 203039 1 + . ID=LTnewLM_240010600 LTnewLM_24 AUGUSTUS mRNA 201501 203039 1 + . ID=LTnewLM_240010600.1;Parent=LTnewLM_240010600 LTnewLM_24 AUGUSTUS CDS 201501 203039 1 + 0 ID=LTnewLM_240010600.1:CDS:1;Parent=LTnewLM_240010600.1 ### LTnewLM_24 . polypeptide 201501 203039 . + . ID=LTnewLM_240010600.1:pep;Derives_from=LTnewLM_240010600.1;orthologous_to=LmjF.24.0550_mRNA;ortholog_cluster=OG0002597;product=term%3DMethyltransferase TRM13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05206;Ontology_term=GO:0008033,GO:0008168 LTnewLM_24 Pfam protein_match 202443 203024 . + . Parent=LTnewLM_240010600.1:pep;Name=PF05206;signature_desc=Methyltransferase TRM13;Ontology_term=GO:0008168,GO:0008033 ### LTnewLM_24 AUGUSTUS gene 203917 204309 1 + . ID=LTnewLM_240010700 LTnewLM_24 AUGUSTUS mRNA 203917 204309 1 + . ID=LTnewLM_240010700.1;Parent=LTnewLM_240010700 LTnewLM_24 AUGUSTUS CDS 203917 204309 1 + 0 ID=LTnewLM_240010700.1:CDS:1;Parent=LTnewLM_240010700.1 ### LTnewLM_24 . polypeptide 203917 204309 . + . ID=LTnewLM_240010700.1:pep;Derives_from=LTnewLM_240010700.1;orthologous_to=LmjF.24.0552_mRNA;ortholog_cluster=OG0002598;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 204922 205200 1 + . ID=LTnewLM_240010800 LTnewLM_24 AUGUSTUS mRNA 204922 205200 1 + . ID=LTnewLM_240010800.1;Parent=LTnewLM_240010800 LTnewLM_24 AUGUSTUS CDS 204922 205200 1 + 0 ID=LTnewLM_240010800.1:CDS:1;Parent=LTnewLM_240010800.1 ### LTnewLM_24 . polypeptide 204922 205200 . + . ID=LTnewLM_240010800.1:pep;Derives_from=LTnewLM_240010800.1;orthologous_to=LmjF.24.0555_mRNA;ortholog_cluster=OG0002599;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 206414 207502 1 + . ID=LTnewLM_240010900 LTnewLM_24 AUGUSTUS mRNA 206414 207502 1 + . ID=LTnewLM_240010900.1;Parent=LTnewLM_240010900 LTnewLM_24 AUGUSTUS CDS 206414 207502 1 + 0 ID=LTnewLM_240010900.1:CDS:1;Parent=LTnewLM_240010900.1 ### LTnewLM_24 . polypeptide 206414 207502 . + . ID=LTnewLM_240010900.1:pep;Derives_from=LTnewLM_240010900.1;orthologous_to=LmjF.24.0580_mRNA;ortholog_cluster=OG0002600;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 208414 210477 1 + . ID=LTnewLM_240011000 LTnewLM_24 AUGUSTUS mRNA 208414 210477 1 + . ID=LTnewLM_240011000.1;Parent=LTnewLM_240011000 LTnewLM_24 AUGUSTUS CDS 208414 210477 1 + 0 ID=LTnewLM_240011000.1:CDS:1;Parent=LTnewLM_240011000.1 ### LTnewLM_24 . polypeptide 208414 210477 . + . ID=LTnewLM_240011000.1:pep;Derives_from=LTnewLM_240011000.1;orthologous_to=LmjF.24.0590_mRNA;ortholog_cluster=OG0002601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 213156 213653 1 + . ID=LTnewLM_240011100 LTnewLM_24 AUGUSTUS mRNA 213156 213653 1 + . ID=LTnewLM_240011100.1;Parent=LTnewLM_240011100 LTnewLM_24 AUGUSTUS CDS 213156 213653 1 + 0 ID=LTnewLM_240011100.1:CDS:1;Parent=LTnewLM_240011100.1 ### LTnewLM_24 . polypeptide 213156 213653 . + . ID=LTnewLM_240011100.1:pep;Derives_from=LTnewLM_240011100.1;product=term%3Dhypothetical protein ### LTnewLM_24 Aragorn_1.2.36 gene 213682 213753 . + . ID=LTnewLM_240011200 LTnewLM_24 Aragorn_1.2.36 tRNA 213682 213753 . + . ID=LTnewLM_240011200:tRNA;Parent=LTnewLM_240011200;aa=Pro;anticodon=cgg;gc_content=62.5 ### LTnewLM_24 . pseudogene 214468 219828 . + . ID=LTnewLM_240011300:pseudogene;coverage=0.997;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0600_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 214468 219828 . + . ID=LTnewLM_240011300.1;Parent=LTnewLM_240011300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 214468 219828 . + . ID=LTnewLM_240011300.1:pseudogenic_exon:1;Parent=LTnewLM_240011300.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 214468 219828 . + . ID=LTnewLM_240011300.1:pep;Derives_from=LTnewLM_240011300.1;orthologous_to=LmjF.24.0600_mRNA;ortholog_cluster=OG0007526;product=term%3DRibosome 60S biogenesis N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11707 LTnewLM_24 Pfam protein_match 215398 215550 . + . Parent=LTnewLM_240011300.1:pep;Name=PF11707;signature_desc=Ribosome 60S biogenesis N-terminal ### LTnewLM_24 AUGUSTUS gene 221187 224495 1 + . ID=LTnewLM_240011400 LTnewLM_24 AUGUSTUS mRNA 221187 224495 1 + . ID=LTnewLM_240011400.1;Parent=LTnewLM_240011400 LTnewLM_24 AUGUSTUS CDS 221187 224495 1 + 0 ID=LTnewLM_240011400.1:CDS:1;Parent=LTnewLM_240011400.1 ### LTnewLM_24 . polypeptide 221187 224495 . + . ID=LTnewLM_240011400.1:pep;Derives_from=LTnewLM_240011400.1;orthologous_to=LmjF.24.0610_mRNA;ortholog_cluster=OG0002602;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_24 Pfam protein_match 221757 222149 . + . Parent=LTnewLM_240011400.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_24 Pfam protein_match 221772 222449 . + . Parent=LTnewLM_240011400.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_24 Pfam protein_match 222621 222932 . + . Parent=LTnewLM_240011400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_24 AUGUSTUS gene 225333 227765 1 + . ID=LTnewLM_240011500 LTnewLM_24 AUGUSTUS mRNA 225333 227765 1 + . ID=LTnewLM_240011500.1;Parent=LTnewLM_240011500 LTnewLM_24 AUGUSTUS CDS 225333 227765 1 + 0 ID=LTnewLM_240011500.1:CDS:1;Parent=LTnewLM_240011500.1 ### LTnewLM_24 . polypeptide 225333 227765 . + . ID=LTnewLM_240011500.1:pep;Derives_from=LTnewLM_240011500.1;orthologous_to=LmjF.24.0620_mRNA;ortholog_cluster=OG0002603;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_24 Pfam protein_match 225696 226805 . + . Parent=LTnewLM_240011500.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_24 AUGUSTUS gene 229027 229347 1 + . ID=LTnewLM_240011600 LTnewLM_24 AUGUSTUS mRNA 229027 229347 1 + . ID=LTnewLM_240011600.1;Parent=LTnewLM_240011600 LTnewLM_24 AUGUSTUS CDS 229027 229347 1 + 0 ID=LTnewLM_240011600.1:CDS:1;Parent=LTnewLM_240011600.1 ### LTnewLM_24 . polypeptide 229027 229347 . + . ID=LTnewLM_240011600.1:pep;Derives_from=LTnewLM_240011600.1;orthologous_to=LTnewLM_070018800.1,LTnewLM_260009600.1,LmjF.24.0630_mRNA,LmjF.26.0460_mRNA;ortholog_cluster=OG0000090;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_24 Pfam protein_match 229150 229332 . + . Parent=LTnewLM_240011600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_24 AUGUSTUS gene 231274 233007 1 + . ID=LTnewLM_240011700 LTnewLM_24 AUGUSTUS mRNA 231274 233007 1 + . ID=LTnewLM_240011700.1;Parent=LTnewLM_240011700 LTnewLM_24 AUGUSTUS CDS 231274 233007 1 + 0 ID=LTnewLM_240011700.1:CDS:1;Parent=LTnewLM_240011700.1 ### LTnewLM_24 . polypeptide 231274 233007 . + . ID=LTnewLM_240011700.1:pep;Derives_from=LTnewLM_240011700.1;orthologous_to=LmjF.24.0640_mRNA;ortholog_cluster=OG0002604;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_24 Pfam protein_match 231388 232239 . + . Parent=LTnewLM_240011700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_24 Pfam protein_match 231397 231696 . + . Parent=LTnewLM_240011700.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_24 AUGUSTUS gene 235213 238197 1 + . ID=LTnewLM_240011800 LTnewLM_24 AUGUSTUS mRNA 235213 238197 1 + . ID=LTnewLM_240011800.1;Parent=LTnewLM_240011800 LTnewLM_24 AUGUSTUS CDS 235213 238197 1 + 0 ID=LTnewLM_240011800.1:CDS:1;Parent=LTnewLM_240011800.1 ### LTnewLM_24 . polypeptide 235213 238197 . + . ID=LTnewLM_240011800.1:pep;Derives_from=LTnewLM_240011800.1;orthologous_to=LmjF.24.0650_mRNA;ortholog_cluster=OG0002605;product=term%3DPPPDE putative peptidase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05903 LTnewLM_24 Pfam protein_match 235348 235737 . + . Parent=LTnewLM_240011800.1:pep;Name=PF05903;signature_desc=PPPDE putative peptidase domain ### LTnewLM_24 AUGUSTUS gene 239251 241539 1 + . ID=LTnewLM_240011900 LTnewLM_24 AUGUSTUS mRNA 239251 241539 1 + . ID=LTnewLM_240011900.1;Parent=LTnewLM_240011900 LTnewLM_24 AUGUSTUS CDS 239251 241539 1 + 0 ID=LTnewLM_240011900.1:CDS:1;Parent=LTnewLM_240011900.1 ### LTnewLM_24 . polypeptide 239251 241539 . + . ID=LTnewLM_240011900.1:pep;Derives_from=LTnewLM_240011900.1;orthologous_to=LmjF.24.0660_mRNA;ortholog_cluster=OG0002606;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 241986 245939 1 + . ID=LTnewLM_240012000 LTnewLM_24 AUGUSTUS mRNA 241986 245939 1 + . ID=LTnewLM_240012000.1;Parent=LTnewLM_240012000 LTnewLM_24 AUGUSTUS CDS 241986 245939 1 + 0 ID=LTnewLM_240012000.1:CDS:1;Parent=LTnewLM_240012000.1 ### LTnewLM_24 . polypeptide 241986 245939 . + . ID=LTnewLM_240012000.1:pep;Derives_from=LTnewLM_240012000.1;orthologous_to=LmjF.24.0670_mRNA;ortholog_cluster=OG0002607;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 242454 242729 . + . Parent=LTnewLM_240012000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_24 Pfam protein_match 242457 243323 . + . Parent=LTnewLM_240012000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_24 AUGUSTUS gene 248254 249897 1 + . ID=LTnewLM_240012100 LTnewLM_24 AUGUSTUS mRNA 248254 249897 1 + . ID=LTnewLM_240012100.1;Parent=LTnewLM_240012100 LTnewLM_24 AUGUSTUS CDS 248254 249897 1 + 0 ID=LTnewLM_240012100.1:CDS:1;Parent=LTnewLM_240012100.1 ### LTnewLM_24 . polypeptide 248254 249897 . + . ID=LTnewLM_240012100.1:pep;Derives_from=LTnewLM_240012100.1;orthologous_to=LmjF.24.0680_mRNA;ortholog_cluster=OG0002608;product=term%3DSugar (and other) transporter/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083|Pfam:PF07690;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_24 Pfam protein_match 248266 249576 . + . Parent=LTnewLM_240012100.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_24 Pfam protein_match 248281 249408 . + . Parent=LTnewLM_240012100.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_24 . pseudogene 253759 254283 . + . ID=LTnewLM_240012200:pseudogene;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0690_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 253759 254283 . + . ID=LTnewLM_240012200.1;Parent=LTnewLM_240012200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 253759 254283 . + . ID=LTnewLM_240012200.1:pseudogenic_exon:1;Parent=LTnewLM_240012200.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 253759 254283 . + . ID=LTnewLM_240012200.1:pep;Derives_from=LTnewLM_240012200.1;orthologous_to=LmjF.24.0690_mRNA;ortholog_cluster=OG0007527;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 254958 257927 1 + . ID=LTnewLM_240012300 LTnewLM_24 AUGUSTUS mRNA 254958 257927 1 + . ID=LTnewLM_240012300.1;Parent=LTnewLM_240012300 LTnewLM_24 AUGUSTUS CDS 254958 257927 1 + 0 ID=LTnewLM_240012300.1:CDS:1;Parent=LTnewLM_240012300.1 ### LTnewLM_24 . polypeptide 254958 257927 . + . ID=LTnewLM_240012300.1:pep;Derives_from=LTnewLM_240012300.1;orthologous_to=LmjF.24.0700_mRNA;ortholog_cluster=OG0002609;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 258970 260286 1 + . ID=LTnewLM_240012400 LTnewLM_24 AUGUSTUS mRNA 258970 260286 1 + . ID=LTnewLM_240012400.1;Parent=LTnewLM_240012400 LTnewLM_24 AUGUSTUS CDS 258970 260286 1 + 0 ID=LTnewLM_240012400.1:CDS:1;Parent=LTnewLM_240012400.1 ### LTnewLM_24 . polypeptide 258970 260286 . + . ID=LTnewLM_240012400.1:pep;Derives_from=LTnewLM_240012400.1;orthologous_to=LmjF.24.0710_mRNA;ortholog_cluster=OG0002610;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 260907 261164 1 + . ID=LTnewLM_240012500 LTnewLM_24 AUGUSTUS mRNA 260907 261164 1 + . ID=LTnewLM_240012500.1;Parent=LTnewLM_240012500 LTnewLM_24 AUGUSTUS CDS 260907 261164 1 + 0 ID=LTnewLM_240012500.1:CDS:1;Parent=LTnewLM_240012500.1 ### LTnewLM_24 . polypeptide 260907 261164 . + . ID=LTnewLM_240012500.1:pep;Derives_from=LTnewLM_240012500.1;orthologous_to=LmjF.24.0720_mRNA;ortholog_cluster=OG0002611;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 262179 263738 1 + . ID=LTnewLM_240012600 LTnewLM_24 AUGUSTUS mRNA 262179 263738 1 + . ID=LTnewLM_240012600.1;Parent=LTnewLM_240012600 LTnewLM_24 AUGUSTUS CDS 262179 263738 1 + 0 ID=LTnewLM_240012600.1:CDS:1;Parent=LTnewLM_240012600.1 ### LTnewLM_24 . polypeptide 262179 263738 . + . ID=LTnewLM_240012600.1:pep;Derives_from=LTnewLM_240012600.1;orthologous_to=LmjF.24.0730_mRNA;ortholog_cluster=OG0002612;product=term%3DSRP54-type protein%2C helical bundle domain/SRP54-type protein%2C GTPase domain/CobW/HypB/UreG%2C nucleotide-binding domain/Signal peptide binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02881|Pfam:PF00448|Pfam:PF02492|Pfam:PF02978;Ontology_term=GO:0005525,GO:0006614,GO:0048500,GO:0008312 LTnewLM_24 Pfam protein_match 262194 262418 . + . Parent=LTnewLM_240012600.1:pep;Name=PF02881;signature_desc=SRP54-type protein%2C helical bundle domain;Ontology_term=GO:0005525,GO:0006614 LTnewLM_24 Pfam protein_match 262482 263063 . + . Parent=LTnewLM_240012600.1:pep;Name=PF00448;signature_desc=SRP54-type protein%2C GTPase domain;Ontology_term=GO:0005525,GO:0006614 LTnewLM_24 Pfam protein_match 262485 262940 . + . Parent=LTnewLM_240012600.1:pep;Name=PF02492;signature_desc=CobW/HypB/UreG%2C nucleotide-binding domain LTnewLM_24 Pfam protein_match 263157 263453 . + . Parent=LTnewLM_240012600.1:pep;Name=PF02978;signature_desc=Signal peptide binding domain;Ontology_term=GO:0008312,GO:0006614,GO:0048500 ### LTnewLM_24 AUGUSTUS gene 265393 268575 1 + . ID=LTnewLM_240012700 LTnewLM_24 AUGUSTUS mRNA 265393 268575 1 + . ID=LTnewLM_240012700.1;Parent=LTnewLM_240012700 LTnewLM_24 AUGUSTUS CDS 265393 268575 1 + 0 ID=LTnewLM_240012700.1:CDS:1;Parent=LTnewLM_240012700.1 ### LTnewLM_24 . polypeptide 265393 268575 . + . ID=LTnewLM_240012700.1:pep;Derives_from=LTnewLM_240012700.1;orthologous_to=LmjF.24.0740_mRNA;ortholog_cluster=OG0002613;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 269878 270855 1 + . ID=LTnewLM_240012800 LTnewLM_24 AUGUSTUS mRNA 269878 270855 1 + . ID=LTnewLM_240012800.1;Parent=LTnewLM_240012800 LTnewLM_24 AUGUSTUS CDS 269878 270855 1 + 0 ID=LTnewLM_240012800.1:CDS:1;Parent=LTnewLM_240012800.1 ### LTnewLM_24 . polypeptide 269878 270855 . + . ID=LTnewLM_240012800.1:pep;Derives_from=LTnewLM_240012800.1;orthologous_to=LmjF.24.0750_mRNA;ortholog_cluster=OG0002614;product=term%3DHAD domain in Swiss Army Knife RNA repair proteins%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18143 LTnewLM_24 Pfam protein_match 269911 270393 . + . Parent=LTnewLM_240012800.1:pep;Name=PF18143;signature_desc=HAD domain in Swiss Army Knife RNA repair proteins ### LTnewLM_24 AUGUSTUS gene 273096 276476 1 + . ID=LTnewLM_240012900 LTnewLM_24 AUGUSTUS mRNA 273096 276476 1 + . ID=LTnewLM_240012900.1;Parent=LTnewLM_240012900 LTnewLM_24 AUGUSTUS CDS 273096 276476 1 + 0 ID=LTnewLM_240012900.1:CDS:1;Parent=LTnewLM_240012900.1 ### LTnewLM_24 . polypeptide 273096 276476 . + . ID=LTnewLM_240012900.1:pep;Derives_from=LTnewLM_240012900.1;orthologous_to=LmjF.24.0760_mRNA;ortholog_cluster=OG0002615;product=term%3DType III restriction enzyme%2C res subunit/DEAD/DEAH box helicase/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00270|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524,GO:0016787,GO:0003677 LTnewLM_24 Pfam protein_match 274398 274907 . + . Parent=LTnewLM_240012900.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_24 Pfam protein_match 274464 274916 . + . Parent=LTnewLM_240012900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_24 Pfam protein_match 274467 275285 . + . Parent=LTnewLM_240012900.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_24 Pfam protein_match 275487 275810 . + . Parent=LTnewLM_240012900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_24 AUGUSTUS gene 277617 279332 1 + . ID=LTnewLM_240013000 LTnewLM_24 AUGUSTUS mRNA 277617 279332 1 + . ID=LTnewLM_240013000.1;Parent=LTnewLM_240013000 LTnewLM_24 AUGUSTUS CDS 277617 279332 1 + 0 ID=LTnewLM_240013000.1:CDS:1;Parent=LTnewLM_240013000.1 ### LTnewLM_24 . polypeptide 277617 279332 . + . ID=LTnewLM_240013000.1:pep;Derives_from=LTnewLM_240013000.1;orthologous_to=LTnewLM_240013100.1,LmjF.24.0770_mRNA;ortholog_cluster=OG0000390;product=term%3DMalic enzyme%2C N-terminal domain/Malic enzyme%2C NAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00390|Pfam:PF03949;Ontology_term=GO:0055114,GO:0004471,GO:0051287 LTnewLM_24 Pfam protein_match 277866 278402 . + . Parent=LTnewLM_240013000.1:pep;Name=PF00390;signature_desc=Malic enzyme%2C N-terminal domain;Ontology_term=GO:0004471,GO:0055114 LTnewLM_24 Pfam protein_match 278433 279206 . + . Parent=LTnewLM_240013000.1:pep;Name=PF03949;signature_desc=Malic enzyme%2C NAD binding domain;Ontology_term=GO:0004471,GO:0051287,GO:0055114 ### LTnewLM_24 AUGUSTUS gene 283064 284785 1 + . ID=LTnewLM_240013100 LTnewLM_24 AUGUSTUS mRNA 283064 284785 1 + . ID=LTnewLM_240013100.1;Parent=LTnewLM_240013100 LTnewLM_24 AUGUSTUS CDS 283064 284785 1 + 0 ID=LTnewLM_240013100.1:CDS:1;Parent=LTnewLM_240013100.1 ### LTnewLM_24 . polypeptide 283064 284785 . + . ID=LTnewLM_240013100.1:pep;Derives_from=LTnewLM_240013100.1;orthologous_to=LTnewLM_240013000.1,LmjF.24.0770_mRNA;ortholog_cluster=OG0000390;product=term%3DMalic enzyme%2C N-terminal domain/Malic enzyme%2C NAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00390|Pfam:PF03949;Ontology_term=GO:0055114,GO:0004471,GO:0051287 LTnewLM_24 Pfam protein_match 283310 283849 . + . Parent=LTnewLM_240013100.1:pep;Name=PF00390;signature_desc=Malic enzyme%2C N-terminal domain;Ontology_term=GO:0004471,GO:0055114 LTnewLM_24 Pfam protein_match 283880 284647 . + . Parent=LTnewLM_240013100.1:pep;Name=PF03949;signature_desc=Malic enzyme%2C NAD binding domain;Ontology_term=GO:0004471,GO:0051287,GO:0055114 ### LTnewLM_24 AUGUSTUS gene 287296 288225 1 + . ID=LTnewLM_240013200 LTnewLM_24 AUGUSTUS mRNA 287296 288225 1 + . ID=LTnewLM_240013200.1;Parent=LTnewLM_240013200 LTnewLM_24 AUGUSTUS CDS 287296 288225 1 + 0 ID=LTnewLM_240013200.1:CDS:1;Parent=LTnewLM_240013200.1 ### LTnewLM_24 . polypeptide 287296 288225 . + . ID=LTnewLM_240013200.1:pep;Derives_from=LTnewLM_240013200.1;orthologous_to=LmjF.24.0780_mRNA;ortholog_cluster=OG0002616;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 288746 290494 1 + . ID=LTnewLM_240013300 LTnewLM_24 AUGUSTUS mRNA 288746 290494 1 + . ID=LTnewLM_240013300.1;Parent=LTnewLM_240013300 LTnewLM_24 AUGUSTUS CDS 288746 290494 1 + 0 ID=LTnewLM_240013300.1:CDS:1;Parent=LTnewLM_240013300.1 ### LTnewLM_24 . polypeptide 288746 290494 . + . ID=LTnewLM_240013300.1:pep;Derives_from=LTnewLM_240013300.1;orthologous_to=LmjF.24.0790_mRNA;ortholog_cluster=OG0002617;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 291265 293064 1 + . ID=LTnewLM_240013400 LTnewLM_24 AUGUSTUS mRNA 291265 293064 1 + . ID=LTnewLM_240013400.1;Parent=LTnewLM_240013400 LTnewLM_24 AUGUSTUS CDS 291265 293064 1 + 0 ID=LTnewLM_240013400.1:CDS:1;Parent=LTnewLM_240013400.1 ### LTnewLM_24 . polypeptide 291265 293064 . + . ID=LTnewLM_240013400.1:pep;Derives_from=LTnewLM_240013400.1;orthologous_to=LmjF.24.0800_mRNA;ortholog_cluster=OG0002618;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 293842 295617 1 + . ID=LTnewLM_240013500 LTnewLM_24 AUGUSTUS mRNA 293842 295617 1 + . ID=LTnewLM_240013500.1;Parent=LTnewLM_240013500 LTnewLM_24 AUGUSTUS CDS 293842 295617 1 + 0 ID=LTnewLM_240013500.1:CDS:1;Parent=LTnewLM_240013500.1 ### LTnewLM_24 . polypeptide 293842 295617 . + . ID=LTnewLM_240013500.1:pep;Derives_from=LTnewLM_240013500.1;orthologous_to=LmjF.24.0810_mRNA;ortholog_cluster=OG0002619;product=term%3DExonuclease/RNA 2'-phosphotransferase%2C Tpt1 / KptA family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929|Pfam:PF01885;Ontology_term=GO:0006388,GO:0016772 LTnewLM_24 Pfam protein_match 294079 294639 . + . Parent=LTnewLM_240013500.1:pep;Name=PF00929;signature_desc=Exonuclease LTnewLM_24 Pfam protein_match 295006 295530 . + . Parent=LTnewLM_240013500.1:pep;Name=PF01885;signature_desc=RNA 2'-phosphotransferase%2C Tpt1 / KptA family;Ontology_term=GO:0016772,GO:0006388 ### LTnewLM_24 AUGUSTUS gene 296828 305041 1 + . ID=LTnewLM_240013600 LTnewLM_24 AUGUSTUS mRNA 296828 305041 1 + . ID=LTnewLM_240013600.1;Parent=LTnewLM_240013600 LTnewLM_24 AUGUSTUS CDS 296828 305041 1 + 0 ID=LTnewLM_240013600.1:CDS:1;Parent=LTnewLM_240013600.1 ### LTnewLM_24 . polypeptide 296828 305041 . + . ID=LTnewLM_240013600.1:pep;Derives_from=LTnewLM_240013600.1;orthologous_to=LmjF.24.0820_mRNA;ortholog_cluster=OG0002620;product=term%3DSacI homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02383;Ontology_term=GO:0042578 LTnewLM_24 Pfam protein_match 297278 298606 . + . Parent=LTnewLM_240013600.1:pep;Name=PF02383;signature_desc=SacI homology domain;Ontology_term=GO:0042578 ### LTnewLM_24 AUGUSTUS gene 306359 308794 1 + . ID=LTnewLM_240013700 LTnewLM_24 AUGUSTUS mRNA 306359 308794 1 + . ID=LTnewLM_240013700.1;Parent=LTnewLM_240013700 LTnewLM_24 AUGUSTUS CDS 306359 308794 1 + 0 ID=LTnewLM_240013700.1:CDS:1;Parent=LTnewLM_240013700.1 ### LTnewLM_24 . polypeptide 306359 308794 . + . ID=LTnewLM_240013700.1:pep;Derives_from=LTnewLM_240013700.1;orthologous_to=LmjF.24.0830_mRNA;ortholog_cluster=OG0002621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 310176 310889 1 + . ID=LTnewLM_240013800 LTnewLM_24 AUGUSTUS mRNA 310176 310889 1 + . ID=LTnewLM_240013800.1;Parent=LTnewLM_240013800 LTnewLM_24 AUGUSTUS CDS 310176 310889 1 + 0 ID=LTnewLM_240013800.1:CDS:1;Parent=LTnewLM_240013800.1 ### LTnewLM_24 . polypeptide 310176 310889 . + . ID=LTnewLM_240013800.1:pep;Derives_from=LTnewLM_240013800.1;orthologous_to=LmjF.24.0840_mRNA;ortholog_cluster=OG0002622;product=term%3DAxonemal dynein light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10211 LTnewLM_24 Pfam protein_match 310305 310859 . + . Parent=LTnewLM_240013800.1:pep;Name=PF10211;signature_desc=Axonemal dynein light chain ### LTnewLM_24 AUGUSTUS gene 312020 312775 1 + . ID=LTnewLM_240013900 LTnewLM_24 AUGUSTUS mRNA 312020 312775 1 + . ID=LTnewLM_240013900.1;Parent=LTnewLM_240013900 LTnewLM_24 AUGUSTUS CDS 312020 312775 1 + 0 ID=LTnewLM_240013900.1:CDS:1;Parent=LTnewLM_240013900.1 ### LTnewLM_24 . polypeptide 312020 312775 . + . ID=LTnewLM_240013900.1:pep;Derives_from=LTnewLM_240013900.1;orthologous_to=LmjF.24.0850_mRNA;ortholog_cluster=OG0002623;product=term%3DTriosephosphate isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00121;Ontology_term=GO:0004807,GO:0008152 LTnewLM_24 Pfam protein_match 312038 312763 . + . Parent=LTnewLM_240013900.1:pep;Name=PF00121;signature_desc=Triosephosphate isomerase;Ontology_term=GO:0004807,GO:0008152 ### LTnewLM_24 AUGUSTUS gene 314120 315154 1 + . ID=LTnewLM_240014000 LTnewLM_24 AUGUSTUS mRNA 314120 315154 1 + . ID=LTnewLM_240014000.1;Parent=LTnewLM_240014000 LTnewLM_24 AUGUSTUS CDS 314120 315154 1 + 0 ID=LTnewLM_240014000.1:CDS:1;Parent=LTnewLM_240014000.1 ### LTnewLM_24 . polypeptide 314120 315154 . + . ID=LTnewLM_240014000.1:pep;Derives_from=LTnewLM_240014000.1;orthologous_to=LmjF.24.0860_mRNA;ortholog_cluster=OG0002624;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 315796 316479 1 + . ID=LTnewLM_240014100 LTnewLM_24 AUGUSTUS mRNA 315796 316479 1 + . ID=LTnewLM_240014100.1;Parent=LTnewLM_240014100 LTnewLM_24 AUGUSTUS CDS 315796 316479 1 + 0 ID=LTnewLM_240014100.1:CDS:1;Parent=LTnewLM_240014100.1 ### LTnewLM_24 . polypeptide 315796 316479 . + . ID=LTnewLM_240014100.1:pep;Derives_from=LTnewLM_240014100.1;orthologous_to=LmjF.24.0870_mRNA;ortholog_cluster=OG0002625;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_24 Pfam protein_match 315880 316452 . + . Parent=LTnewLM_240014100.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_24 AUGUSTUS gene 317662 318015 1 + . ID=LTnewLM_240014200 LTnewLM_24 AUGUSTUS mRNA 317662 318015 1 + . ID=LTnewLM_240014200.1;Parent=LTnewLM_240014200 LTnewLM_24 AUGUSTUS CDS 317662 318015 1 + 0 ID=LTnewLM_240014200.1:CDS:1;Parent=LTnewLM_240014200.1 ### LTnewLM_24 . polypeptide 317662 318015 . + . ID=LTnewLM_240014200.1:pep;Derives_from=LTnewLM_240014200.1;orthologous_to=LmjF.24.0880_mRNA;ortholog_cluster=OG0002626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 319801 323316 1 + . ID=LTnewLM_240014300 LTnewLM_24 AUGUSTUS mRNA 319801 323316 1 + . ID=LTnewLM_240014300.1;Parent=LTnewLM_240014300 LTnewLM_24 AUGUSTUS CDS 319801 323316 1 + 0 ID=LTnewLM_240014300.1:CDS:1;Parent=LTnewLM_240014300.1 ### LTnewLM_24 . polypeptide 319801 323316 . + . ID=LTnewLM_240014300.1:pep;Derives_from=LTnewLM_240014300.1;orthologous_to=LmjF.24.0890_mRNA;ortholog_cluster=OG0002627;product=term%3DDNA polymerase family A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00476;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_24 Pfam protein_match 322201 323274 . + . Parent=LTnewLM_240014300.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_24 Liftoff gene 324004 327750 . + . ID=LTnewLM_240014400;coverage=0.994;sequence_ID=0.927;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.0900_0 LTnewLM_24 Liftoff mRNA 324004 327750 . + . ID=LTnewLM_240014400.1;Parent=LTnewLM_240014400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 324004 327750 . + 0 ID=LTnewLM_240014400.1:CDS:1;Parent=LTnewLM_240014400.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 324004 327750 . + . ID=LTnewLM_240014400.1:pep;Derives_from=LTnewLM_240014400.1;orthologous_to=LmjF.24.0900_mRNA;ortholog_cluster=OG0002628;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 328863 331268 1 + . ID=LTnewLM_240014500 LTnewLM_24 AUGUSTUS mRNA 328863 331268 1 + . ID=LTnewLM_240014500.1;Parent=LTnewLM_240014500 LTnewLM_24 AUGUSTUS CDS 328863 331268 1 + 0 ID=LTnewLM_240014500.1:CDS:1;Parent=LTnewLM_240014500.1 ### LTnewLM_24 . polypeptide 328863 331268 . + . ID=LTnewLM_240014500.1:pep;Derives_from=LTnewLM_240014500.1;orthologous_to=LmjF.24.0910_mRNA;ortholog_cluster=OG0002629;product=term%3DMCM N-terminal domain/MCM OB domain/MCM P-loop domain/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14551|Pfam:PF17207|Pfam:PF00493|Pfam:PF01078|Pfam:PF17855;Ontology_term=GO:0015995,GO:0005524,GO:0015979,GO:0006260,GO:0016851,GO:0003677 LTnewLM_24 Pfam protein_match 328995 329204 . + . Parent=LTnewLM_240014500.1:pep;Name=PF14551;signature_desc=MCM N-terminal domain LTnewLM_24 Pfam protein_match 329277 329696 . + . Parent=LTnewLM_240014500.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_24 Pfam protein_match 329901 330560 . + . Parent=LTnewLM_240014500.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_24 Pfam protein_match 330213 330416 . + . Parent=LTnewLM_240014500.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_24 Pfam protein_match 330687 331004 . + . Parent=LTnewLM_240014500.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_24 . pseudogene 331653 333143 . + . ID=LTnewLM_240014600:pseudogene;coverage=1.0;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0920_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 331653 333143 . + . ID=LTnewLM_240014600.1;Parent=LTnewLM_240014600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 331653 333143 . + . ID=LTnewLM_240014600.1:pseudogenic_exon:1;Parent=LTnewLM_240014600.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 331653 333143 . + . ID=LTnewLM_240014600.1:pep;Derives_from=LTnewLM_240014600.1;orthologous_to=LmjF.24.0920_mRNA;ortholog_cluster=OG0007528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 333774 336599 1 + . ID=LTnewLM_240014700 LTnewLM_24 AUGUSTUS mRNA 333774 336599 1 + . ID=LTnewLM_240014700.1;Parent=LTnewLM_240014700 LTnewLM_24 AUGUSTUS CDS 333774 336599 1 + 0 ID=LTnewLM_240014700.1:CDS:1;Parent=LTnewLM_240014700.1 ### LTnewLM_24 . polypeptide 333774 336599 . + . ID=LTnewLM_240014700.1:pep;Derives_from=LTnewLM_240014700.1;orthologous_to=LmjF.24.0930_mRNA;ortholog_cluster=OG0002630;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 337393 337740 1 + . ID=LTnewLM_240014800 LTnewLM_24 AUGUSTUS mRNA 337393 337740 1 + . ID=LTnewLM_240014800.1;Parent=LTnewLM_240014800 LTnewLM_24 AUGUSTUS CDS 337393 337740 1 + 0 ID=LTnewLM_240014800.1:CDS:1;Parent=LTnewLM_240014800.1 ### LTnewLM_24 . polypeptide 337393 337740 . + . ID=LTnewLM_240014800.1:pep;Derives_from=LTnewLM_240014800.1;orthologous_to=LmjF.24.0940_mRNA;ortholog_cluster=OG0002631;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 338675 339961 1 + . ID=LTnewLM_240014900 LTnewLM_24 AUGUSTUS mRNA 338675 339961 1 + . ID=LTnewLM_240014900.1;Parent=LTnewLM_240014900 LTnewLM_24 AUGUSTUS CDS 338675 339961 1 + 0 ID=LTnewLM_240014900.1:CDS:1;Parent=LTnewLM_240014900.1 ### LTnewLM_24 . polypeptide 338675 339961 . + . ID=LTnewLM_240014900.1:pep;Derives_from=LTnewLM_240014900.1;orthologous_to=LmjF.24.0950_mRNA;ortholog_cluster=OG0002632;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_24 Pfam protein_match 339479 339826 . + . Parent=LTnewLM_240014900.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_24 AUGUSTUS gene 341103 344066 1 + . ID=LTnewLM_240015000 LTnewLM_24 AUGUSTUS mRNA 341103 344066 1 + . ID=LTnewLM_240015000.1;Parent=LTnewLM_240015000 LTnewLM_24 AUGUSTUS CDS 341103 344066 1 + 0 ID=LTnewLM_240015000.1:CDS:1;Parent=LTnewLM_240015000.1 ### LTnewLM_24 . polypeptide 341103 344066 . + . ID=LTnewLM_240015000.1:pep;Derives_from=LTnewLM_240015000.1;orthologous_to=LmjF.24.0960_mRNA;ortholog_cluster=OG0002633;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 344629 346923 1 + . ID=LTnewLM_240015100 LTnewLM_24 AUGUSTUS mRNA 344629 346923 1 + . ID=LTnewLM_240015100.1;Parent=LTnewLM_240015100 LTnewLM_24 AUGUSTUS CDS 344629 346923 1 + 0 ID=LTnewLM_240015100.1:CDS:1;Parent=LTnewLM_240015100.1 ### LTnewLM_24 . polypeptide 344629 346923 . + . ID=LTnewLM_240015100.1:pep;Derives_from=LTnewLM_240015100.1;orthologous_to=LmjF.24.0970_mRNA;ortholog_cluster=OG0002634;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 348274 352954 . + . ID=LTnewLM_240015200:pseudogene;coverage=0.981;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.0980_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 348274 352954 . + . ID=LTnewLM_240015200.1;Parent=LTnewLM_240015200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 348274 352954 . + . ID=LTnewLM_240015200.1:pseudogenic_exon:1;Parent=LTnewLM_240015200.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 348274 352954 . + . ID=LTnewLM_240015200.1:pep;Derives_from=LTnewLM_240015200.1;orthologous_to=LmjF.24.0980_mRNA;ortholog_cluster=OG0007529;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 353580 355559 1 + . ID=LTnewLM_240015300 LTnewLM_24 AUGUSTUS mRNA 353580 355559 1 + . ID=LTnewLM_240015300.1;Parent=LTnewLM_240015300 LTnewLM_24 AUGUSTUS CDS 353580 355559 1 + 0 ID=LTnewLM_240015300.1:CDS:1;Parent=LTnewLM_240015300.1 ### LTnewLM_24 . polypeptide 353580 355559 . + . ID=LTnewLM_240015300.1:pep;Derives_from=LTnewLM_240015300.1;orthologous_to=LmjF.17.0540_mRNA,LmjF.24.0990_mRNA;ortholog_cluster=OG0000391;product=term%3DRad17 P-loop domain/ATPase family associated with various cellular activities (AAA)/Replication factor RFC1 C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03215|Pfam:PF00004|Pfam:PF08519;Ontology_term=GO:0003689,GO:0006260,GO:0005663,GO:0005524 LTnewLM_24 Pfam protein_match 353628 353966 . + . Parent=LTnewLM_240015300.1:pep;Name=PF03215;signature_desc=Rad17 P-loop domain LTnewLM_24 Pfam protein_match 353775 353987 . + . Parent=LTnewLM_240015300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_24 Pfam protein_match 354546 355070 . + . Parent=LTnewLM_240015300.1:pep;Name=PF08519;signature_desc=Replication factor RFC1 C terminal domain;Ontology_term=GO:0003689,GO:0005524,GO:0006260,GO:0005663 ### LTnewLM_24 . pseudogene 356453 358102 . + . ID=LTnewLM_240015400:pseudogene;coverage=1.0;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1000_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 356453 358102 . + . ID=LTnewLM_240015400.1;Parent=LTnewLM_240015400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 356453 358102 . + . ID=LTnewLM_240015400.1:pseudogenic_exon:1;Parent=LTnewLM_240015400.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 356453 358102 . + . ID=LTnewLM_240015400.1:pep;Derives_from=LTnewLM_240015400.1;orthologous_to=LmjF.24.1000_mRNA;ortholog_cluster=OG0007530;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 359049 360332 1 + . ID=LTnewLM_240015500 LTnewLM_24 AUGUSTUS mRNA 359049 360332 1 + . ID=LTnewLM_240015500.1;Parent=LTnewLM_240015500 LTnewLM_24 AUGUSTUS CDS 359049 360332 1 + 0 ID=LTnewLM_240015500.1:CDS:1;Parent=LTnewLM_240015500.1 ### LTnewLM_24 . polypeptide 359049 360332 . + . ID=LTnewLM_240015500.1:pep;Derives_from=LTnewLM_240015500.1;orthologous_to=LmjF.24.1010_mRNA;ortholog_cluster=OG0002635;product=term%3DMnd1 HTH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03962 LTnewLM_24 Pfam protein_match 359124 359297 . + . Parent=LTnewLM_240015500.1:pep;Name=PF03962;signature_desc=Mnd1 HTH domain ### LTnewLM_24 AUGUSTUS gene 361397 364429 1 + . ID=LTnewLM_240015600 LTnewLM_24 AUGUSTUS mRNA 361397 364429 1 + . ID=LTnewLM_240015600.1;Parent=LTnewLM_240015600 LTnewLM_24 AUGUSTUS CDS 361397 364429 1 + 0 ID=LTnewLM_240015600.1:CDS:1;Parent=LTnewLM_240015600.1 ### LTnewLM_24 . polypeptide 361397 364429 . + . ID=LTnewLM_240015600.1:pep;Derives_from=LTnewLM_240015600.1;orthologous_to=LmjF.24.1020_mRNA;ortholog_cluster=OG0002636;product=term%3DF-box-like/F-box domain/Galactose oxidase%2C central domain/Kelch motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12937|Pfam:PF00646|Pfam:PF13418|Pfam:PF01344;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 361532 361642 . + . Parent=LTnewLM_240015600.1:pep;Name=PF12937;signature_desc=F-box-like;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 361532 361648 . + . Parent=LTnewLM_240015600.1:pep;Name=PF00646;signature_desc=F-box domain;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 362123 362239 . + . Parent=LTnewLM_240015600.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 362252 362371 . + . Parent=LTnewLM_240015600.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 362261 362371 . + . Parent=LTnewLM_240015600.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain ### LTnewLM_24 AUGUSTUS gene 365062 365694 1 + . ID=LTnewLM_240015700 LTnewLM_24 AUGUSTUS mRNA 365062 365694 1 + . ID=LTnewLM_240015700.1;Parent=LTnewLM_240015700 LTnewLM_24 AUGUSTUS CDS 365062 365694 1 + 0 ID=LTnewLM_240015700.1:CDS:1;Parent=LTnewLM_240015700.1 ### LTnewLM_24 . polypeptide 365062 365694 . + . ID=LTnewLM_240015700.1:pep;Derives_from=LTnewLM_240015700.1;orthologous_to=LmjF.24.1030_mRNA;ortholog_cluster=OG0002637;product=term%3DLeucine rich repeat/Leucine-rich repeat/Leucine Rich repeats (2 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855|Pfam:PF14580|Pfam:PF12799;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 365266 365421 . + . Parent=LTnewLM_240015700.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 365269 365679 . + . Parent=LTnewLM_240015700.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat LTnewLM_24 Pfam protein_match 365386 365502 . + . Parent=LTnewLM_240015700.1:pep;Name=PF12799;signature_desc=Leucine Rich repeats (2 copies) ### LTnewLM_24 Liftoff gene 366606 369365 . + . ID=LTnewLM_240015800;coverage=0.996;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1040_0 LTnewLM_24 Liftoff mRNA 366606 369365 . + . ID=LTnewLM_240015800.1;Parent=LTnewLM_240015800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 366606 369365 . + 0 ID=LTnewLM_240015800.1:CDS:1;Parent=LTnewLM_240015800.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 366606 369365 . + . ID=LTnewLM_240015800.1:pep;Derives_from=LTnewLM_240015800.1;orthologous_to=LmjF.24.1040_mRNA;ortholog_cluster=OG0002638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 370375 374304 . + . ID=LTnewLM_240015900;coverage=0.999;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.1050_0 LTnewLM_24 Liftoff mRNA 370375 374304 . + . ID=LTnewLM_240015900.1;Parent=LTnewLM_240015900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 370375 374304 . + 0 ID=LTnewLM_240015900.1:CDS:1;Parent=LTnewLM_240015900.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 370375 374304 . + . ID=LTnewLM_240015900.1:pep;Derives_from=LTnewLM_240015900.1;orthologous_to=LmjF.24.1050_mRNA;ortholog_cluster=OG0002639;product=term%3DSNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0003677 LTnewLM_24 Pfam protein_match 371296 372303 . + . Parent=LTnewLM_240015900.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_24 Pfam protein_match 372907 373275 . + . Parent=LTnewLM_240015900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_24 AUGUSTUS gene 375035 376561 1 + . ID=LTnewLM_240016000 LTnewLM_24 AUGUSTUS mRNA 375035 376561 1 + . ID=LTnewLM_240016000.1;Parent=LTnewLM_240016000 LTnewLM_24 AUGUSTUS CDS 375035 376561 1 + 0 ID=LTnewLM_240016000.1:CDS:1;Parent=LTnewLM_240016000.1 ### LTnewLM_24 . polypeptide 375035 376561 . + . ID=LTnewLM_240016000.1:pep;Derives_from=LTnewLM_240016000.1;orthologous_to=LmjF.24.1060_mRNA;ortholog_cluster=OG0002640;product=term%3DAKAP7 2'5' RNA ligase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10469 LTnewLM_24 Pfam protein_match 375731 376552 . + . Parent=LTnewLM_240016000.1:pep;Name=PF10469;signature_desc=AKAP7 2'5' RNA ligase-like domain ### LTnewLM_24 AUGUSTUS gene 377615 385255 1 + . ID=LTnewLM_240016100 LTnewLM_24 AUGUSTUS mRNA 377615 385255 1 + . ID=LTnewLM_240016100.1;Parent=LTnewLM_240016100 LTnewLM_24 AUGUSTUS CDS 377615 382405 1 + 0 ID=LTnewLM_240016100.1:CDS:1;Parent=LTnewLM_240016100.1 LTnewLM_24 AUGUSTUS CDS 382499 385255 1 + 0 ID=LTnewLM_240016100.1:CDS:2;Parent=LTnewLM_240016100.1 ### LTnewLM_24 . polypeptide 377615 385255 . + . ID=LTnewLM_240016100.1:pep;Derives_from=LTnewLM_240016100.1;orthologous_to=LmjF.24.1070_mRNA;ortholog_cluster=OG0002641;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 386338 387645 1 + . ID=LTnewLM_240016200 LTnewLM_24 AUGUSTUS mRNA 386338 387645 1 + . ID=LTnewLM_240016200.1;Parent=LTnewLM_240016200 LTnewLM_24 AUGUSTUS CDS 386338 387645 1 + 0 ID=LTnewLM_240016200.1:CDS:1;Parent=LTnewLM_240016200.1 ### LTnewLM_24 . polypeptide 386338 387645 . + . ID=LTnewLM_240016200.1:pep;Derives_from=LTnewLM_240016200.1;orthologous_to=LmjF.24.1080_mRNA;ortholog_cluster=OG0002642;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_24 Pfam protein_match 387463 387633 . + . Parent=LTnewLM_240016200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_24 AUGUSTUS gene 389212 390765 1 + . ID=LTnewLM_240016300 LTnewLM_24 AUGUSTUS mRNA 389212 390765 1 + . ID=LTnewLM_240016300.1;Parent=LTnewLM_240016300 LTnewLM_24 AUGUSTUS CDS 389212 390765 1 + 0 ID=LTnewLM_240016300.1:CDS:1;Parent=LTnewLM_240016300.1 ### LTnewLM_24 . polypeptide 389212 390765 . + . ID=LTnewLM_240016300.1:pep;Derives_from=LTnewLM_240016300.1;orthologous_to=LmjF.24.1090_mRNA;ortholog_cluster=OG0002643;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 392006 395426 . + . ID=LTnewLM_240016400:pseudogene;coverage=1.0;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1100_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 392006 395426 . + . ID=LTnewLM_240016400.1;Parent=LTnewLM_240016400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 392006 395426 . + . ID=LTnewLM_240016400.1:pseudogenic_exon:1;Parent=LTnewLM_240016400.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 392006 395426 . + . ID=LTnewLM_240016400.1:pep;Derives_from=LTnewLM_240016400.1;product=term%3Dhypothetical protein ### LTnewLM_24 AUGUSTUS gene 396909 400460 1 + . ID=LTnewLM_240016500 LTnewLM_24 AUGUSTUS mRNA 396909 400460 1 + . ID=LTnewLM_240016500.1;Parent=LTnewLM_240016500 LTnewLM_24 AUGUSTUS CDS 396909 400460 1 + 0 ID=LTnewLM_240016500.1:CDS:1;Parent=LTnewLM_240016500.1 ### LTnewLM_24 . polypeptide 396909 400460 . + . ID=LTnewLM_240016500.1:pep;Derives_from=LTnewLM_240016500.1;orthologous_to=LmjF.24.1110_mRNA;ortholog_cluster=OG0002644;product=term%3DFormin Homology 2 Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02181 LTnewLM_24 Pfam protein_match 399027 400238 . + . Parent=LTnewLM_240016500.1:pep;Name=PF02181;signature_desc=Formin Homology 2 Domain ### LTnewLM_24 AUGUSTUS gene 400922 401632 1 + . ID=LTnewLM_240016600 LTnewLM_24 AUGUSTUS mRNA 400922 401632 1 + . ID=LTnewLM_240016600.1;Parent=LTnewLM_240016600 LTnewLM_24 AUGUSTUS CDS 400922 401632 1 + 0 ID=LTnewLM_240016600.1:CDS:1;Parent=LTnewLM_240016600.1 ### LTnewLM_24 . polypeptide 400922 401632 . + . ID=LTnewLM_240016600.1:pep;Derives_from=LTnewLM_240016600.1;product=term%3Dhypothetical protein ### LTnewLM_24 AUGUSTUS gene 403068 403832 1 + . ID=LTnewLM_240016700 LTnewLM_24 AUGUSTUS mRNA 403068 403832 1 + . ID=LTnewLM_240016700.1;Parent=LTnewLM_240016700 LTnewLM_24 AUGUSTUS CDS 403068 403832 1 + 0 ID=LTnewLM_240016700.1:CDS:1;Parent=LTnewLM_240016700.1 ### LTnewLM_24 . polypeptide 403068 403832 . + . ID=LTnewLM_240016700.1:pep;Derives_from=LTnewLM_240016700.1;product=term%3Dhypothetical protein ### LTnewLM_24 AUGUSTUS gene 404596 407358 1 + . ID=LTnewLM_240016800 LTnewLM_24 AUGUSTUS mRNA 404596 407358 1 + . ID=LTnewLM_240016800.1;Parent=LTnewLM_240016800 LTnewLM_24 AUGUSTUS CDS 404596 407358 1 + 0 ID=LTnewLM_240016800.1:CDS:1;Parent=LTnewLM_240016800.1 ### LTnewLM_24 . polypeptide 404596 407358 . + . ID=LTnewLM_240016800.1:pep;Derives_from=LTnewLM_240016800.1;orthologous_to=LmjF.24.1120_mRNA;ortholog_cluster=OG0002645;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 409009 411417 1 + . ID=LTnewLM_240016900 LTnewLM_24 AUGUSTUS mRNA 409009 411417 1 + . ID=LTnewLM_240016900.1;Parent=LTnewLM_240016900 LTnewLM_24 AUGUSTUS CDS 409009 411417 1 + 0 ID=LTnewLM_240016900.1:CDS:1;Parent=LTnewLM_240016900.1 ### LTnewLM_24 . polypeptide 409009 411417 . + . ID=LTnewLM_240016900.1:pep;Derives_from=LTnewLM_240016900.1;orthologous_to=LmjF.24.1125_mRNA;ortholog_cluster=OG0002646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 412310 415753 1 + . ID=LTnewLM_240017000 LTnewLM_24 AUGUSTUS mRNA 412310 415753 1 + . ID=LTnewLM_240017000.1;Parent=LTnewLM_240017000 LTnewLM_24 AUGUSTUS CDS 412310 415753 1 + 0 ID=LTnewLM_240017000.1:CDS:1;Parent=LTnewLM_240017000.1 ### LTnewLM_24 . polypeptide 412310 415753 . + . ID=LTnewLM_240017000.1:pep;Derives_from=LTnewLM_240017000.1;orthologous_to=LmjF.24.1130_mRNA;ortholog_cluster=OG0002647;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 416648 417709 0.98 + . ID=LTnewLM_240017100 LTnewLM_24 AUGUSTUS mRNA 416648 417709 0.98 + . ID=LTnewLM_240017100.1;Parent=LTnewLM_240017100 LTnewLM_24 AUGUSTUS CDS 416648 417709 0.98 + 0 ID=LTnewLM_240017100.1:CDS:1;Parent=LTnewLM_240017100.1 ### LTnewLM_24 . polypeptide 416648 417709 . + . ID=LTnewLM_240017100.1:pep;Derives_from=LTnewLM_240017100.1;orthologous_to=LmjF.24.1140_mRNA;ortholog_cluster=OG0002648;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 418542 423074 1 + . ID=LTnewLM_240017200 LTnewLM_24 AUGUSTUS mRNA 418542 423074 1 + . ID=LTnewLM_240017200.1;Parent=LTnewLM_240017200 LTnewLM_24 AUGUSTUS CDS 418542 423074 1 + 0 ID=LTnewLM_240017200.1:CDS:1;Parent=LTnewLM_240017200.1 ### LTnewLM_24 . polypeptide 418542 423074 . + . ID=LTnewLM_240017200.1:pep;Derives_from=LTnewLM_240017200.1;orthologous_to=LmjF.24.1150_mRNA;ortholog_cluster=OG0002649;product=term%3DDNA-dependent RNA polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00940;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_24 Pfam protein_match 421848 423068 . + . Parent=LTnewLM_240017200.1:pep;Name=PF00940;signature_desc=DNA-dependent RNA polymerase;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_24 AUGUSTUS gene 424175 427276 1 + . ID=LTnewLM_240017300 LTnewLM_24 AUGUSTUS mRNA 424175 427276 1 + . ID=LTnewLM_240017300.1;Parent=LTnewLM_240017300 LTnewLM_24 AUGUSTUS CDS 424175 425924 1 + 0 ID=LTnewLM_240017300.1:CDS:1;Parent=LTnewLM_240017300.1 LTnewLM_24 AUGUSTUS CDS 426009 427276 1 + 2 ID=LTnewLM_240017300.1:CDS:2;Parent=LTnewLM_240017300.1 ### LTnewLM_24 . polypeptide 424175 427276 . + . ID=LTnewLM_240017300.1:pep;Derives_from=LTnewLM_240017300.1;orthologous_to=LmjF.24.1160_mRNA;ortholog_cluster=OG0002650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 428602 434639 . + . ID=LTnewLM_240017400;coverage=0.989;sequence_ID=0.921;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.24.1170_0 LTnewLM_24 Liftoff mRNA 428602 434639 . + . ID=LTnewLM_240017400.1;Parent=LTnewLM_240017400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff five_prime_UTR 428602 430799 . + . ID=LTnewLM_240017400:five_prime_UTR;Parent=LTnewLM_240017400.1;extra_copy_number=0 LTnewLM_24 Liftoff CDS 430800 434639 . + 0 ID=LTnewLM_240017400.1:CDS:1;Parent=LTnewLM_240017400.1;extra_copy_number=0 LTnewLM_24 Liftoff mRNA 431038 434639 . + . ID=LTnewLM_240017400.2;Parent=LTnewLM_240017400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff five_prime_UTR 431038 431105 . + . ID=LTnewLM_240017400:five_prime_UTR.1;Parent=LTnewLM_240017400.2;extra_copy_number=0 LTnewLM_24 Liftoff CDS 431106 434639 . + 0 ID=LTnewLM_240017400.2:CDS:1;Parent=LTnewLM_240017400.2;extra_copy_number=0 ### LTnewLM_24 . polypeptide 430800 434639 . + . ID=LTnewLM_240017400.1:pep;Derives_from=LTnewLM_240017400.1;orthologous_to=LTnewLM_240017400.2,LmjF.24.1170.1_mRNA,LmjF.24.1170.2_mRNA;ortholog_cluster=OG0000173;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . polypeptide 431106 434639 . + . ID=LTnewLM_240017400.2:pep;Derives_from=LTnewLM_240017400.2;orthologous_to=LTnewLM_240017400.1,LmjF.24.1170.1_mRNA,LmjF.24.1170.2_mRNA;ortholog_cluster=OG0000173;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 435168 435962 . + . ID=LTnewLM_240017500;coverage=0.985;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1180_0 LTnewLM_24 Liftoff mRNA 435168 435962 . + . ID=LTnewLM_240017500.1;Parent=LTnewLM_240017500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 435168 435962 . + 0 ID=LTnewLM_240017500.1:CDS:1;Parent=LTnewLM_240017500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 435168 435962 . + . ID=LTnewLM_240017500.1:pep;Derives_from=LTnewLM_240017500.1;orthologous_to=LmjF.24.1180_mRNA;ortholog_cluster=OG0002651;product=term%3DSurfeit locus protein 6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04935 LTnewLM_24 Pfam protein_match 435291 435836 . + . Parent=LTnewLM_240017500.1:pep;Name=PF04935;signature_desc=Surfeit locus protein 6 ### LTnewLM_24 AUGUSTUS gene 436842 437783 1 + . ID=LTnewLM_240017600 LTnewLM_24 AUGUSTUS mRNA 436842 437783 1 + . ID=LTnewLM_240017600.1;Parent=LTnewLM_240017600 LTnewLM_24 AUGUSTUS CDS 436842 437783 1 + 0 ID=LTnewLM_240017600.1:CDS:1;Parent=LTnewLM_240017600.1 ### LTnewLM_24 . polypeptide 436842 437783 . + . ID=LTnewLM_240017600.1:pep;Derives_from=LTnewLM_240017600.1;orthologous_to=LmjF.24.1190_mRNA;ortholog_cluster=OG0002652;product=term%3DBax inhibitor 1 like/Inhibitor of apoptosis-promoting Bax1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12811|Pfam:PF01027 LTnewLM_24 Pfam protein_match 437157 437648 . + . Parent=LTnewLM_240017600.1:pep;Name=PF12811;signature_desc=Bax inhibitor 1 like LTnewLM_24 Pfam protein_match 437166 437762 . + . Parent=LTnewLM_240017600.1:pep;Name=PF01027;signature_desc=Inhibitor of apoptosis-promoting Bax1 ### LTnewLM_24 AUGUSTUS gene 439553 440527 1 + . ID=LTnewLM_240017700 LTnewLM_24 AUGUSTUS mRNA 439553 440527 1 + . ID=LTnewLM_240017700.1;Parent=LTnewLM_240017700 LTnewLM_24 AUGUSTUS CDS 439553 440527 1 + 0 ID=LTnewLM_240017700.1:CDS:1;Parent=LTnewLM_240017700.1 ### LTnewLM_24 . polypeptide 439553 440527 . + . ID=LTnewLM_240017700.1:pep;Derives_from=LTnewLM_240017700.1;orthologous_to=LmjF.24.1200_mRNA;ortholog_cluster=OG0002653;product=term%3DYL1 nuclear protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05764;Ontology_term=GO:0005634,GO:0006355 LTnewLM_24 Pfam protein_match 439580 440182 . + . Parent=LTnewLM_240017700.1:pep;Name=PF05764;signature_desc=YL1 nuclear protein;Ontology_term=GO:0006355,GO:0005634 ### LTnewLM_24 AUGUSTUS gene 441193 441516 1 + . ID=LTnewLM_240017800 LTnewLM_24 AUGUSTUS mRNA 441193 441516 1 + . ID=LTnewLM_240017800.1;Parent=LTnewLM_240017800 LTnewLM_24 AUGUSTUS CDS 441193 441516 1 + 0 ID=LTnewLM_240017800.1:CDS:1;Parent=LTnewLM_240017800.1 ### LTnewLM_24 . polypeptide 441193 441516 . + . ID=LTnewLM_240017800.1:pep;Derives_from=LTnewLM_240017800.1;orthologous_to=LmjF.24.1210_mRNA;ortholog_cluster=OG0002654;product=term%3DTranslation initiation factor SUI1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01253;Ontology_term=GO:0006413,GO:0003743 LTnewLM_24 Pfam protein_match 441259 441471 . + . Parent=LTnewLM_240017800.1:pep;Name=PF01253;signature_desc=Translation initiation factor SUI1;Ontology_term=GO:0003743,GO:0006413 ### LTnewLM_24 AUGUSTUS gene 444555 446186 1 + . ID=LTnewLM_240017900 LTnewLM_24 AUGUSTUS mRNA 444555 446186 1 + . ID=LTnewLM_240017900.1;Parent=LTnewLM_240017900 LTnewLM_24 AUGUSTUS CDS 444555 446186 1 + 0 ID=LTnewLM_240017900.1:CDS:1;Parent=LTnewLM_240017900.1 ### LTnewLM_24 . polypeptide 444555 446186 . + . ID=LTnewLM_240017900.1:pep;Derives_from=LTnewLM_240017900.1;orthologous_to=LmjF.24.1220_mRNA;ortholog_cluster=OG0002655;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 448271 450559 1 + . ID=LTnewLM_240018000 LTnewLM_24 AUGUSTUS mRNA 448271 450559 1 + . ID=LTnewLM_240018000.1;Parent=LTnewLM_240018000 LTnewLM_24 AUGUSTUS CDS 448271 450559 1 + 0 ID=LTnewLM_240018000.1:CDS:1;Parent=LTnewLM_240018000.1 ### LTnewLM_24 . polypeptide 448271 450559 . + . ID=LTnewLM_240018000.1:pep;Derives_from=LTnewLM_240018000.1;orthologous_to=LmjF.24.1230_mRNA;ortholog_cluster=OG0002656;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 451395 453221 1 + . ID=LTnewLM_240018100 LTnewLM_24 AUGUSTUS mRNA 451395 453221 1 + . ID=LTnewLM_240018100.1;Parent=LTnewLM_240018100 LTnewLM_24 AUGUSTUS CDS 451395 453221 1 + 0 ID=LTnewLM_240018100.1:CDS:1;Parent=LTnewLM_240018100.1 ### LTnewLM_24 . polypeptide 451395 453221 . + . ID=LTnewLM_240018100.1:pep;Derives_from=LTnewLM_240018100.1;orthologous_to=LmjF.24.1240_mRNA;ortholog_cluster=OG0002657;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 454527 455087 1 + . ID=LTnewLM_240018200 LTnewLM_24 AUGUSTUS mRNA 454527 455087 1 + . ID=LTnewLM_240018200.1;Parent=LTnewLM_240018200 LTnewLM_24 AUGUSTUS CDS 454527 455087 1 + 0 ID=LTnewLM_240018200.1:CDS:1;Parent=LTnewLM_240018200.1 ### LTnewLM_24 . polypeptide 454527 455087 . + . ID=LTnewLM_240018200.1:pep;Derives_from=LTnewLM_240018200.1;orthologous_to=LTnewLM_240018500.1,LmjF.24.1280_mRNA;ortholog_cluster=OG0000392;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_24 Pfam protein_match 454581 455021 . + . Parent=LTnewLM_240018200.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_24 AUGUSTUS gene 457973 458491 1 + . ID=LTnewLM_240018300 LTnewLM_24 AUGUSTUS mRNA 457973 458491 1 + . ID=LTnewLM_240018300.1;Parent=LTnewLM_240018300 LTnewLM_24 AUGUSTUS CDS 457973 458491 1 + 0 ID=LTnewLM_240018300.1:CDS:1;Parent=LTnewLM_240018300.1 ### LTnewLM_24 . polypeptide 457973 458491 . + . ID=LTnewLM_240018300.1:pep;Derives_from=LTnewLM_240018300.1;orthologous_to=LmjF.24.1260_mRNA;ortholog_cluster=OG0002658;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_24 Pfam protein_match 458030 458467 . + . Parent=LTnewLM_240018300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_24 AUGUSTUS gene 460442 460966 1 + . ID=LTnewLM_240018400 LTnewLM_24 AUGUSTUS mRNA 460442 460966 1 + . ID=LTnewLM_240018400.1;Parent=LTnewLM_240018400 LTnewLM_24 AUGUSTUS CDS 460442 460966 1 + 0 ID=LTnewLM_240018400.1:CDS:1;Parent=LTnewLM_240018400.1 ### LTnewLM_24 . polypeptide 460442 460966 . + . ID=LTnewLM_240018400.1:pep;Derives_from=LTnewLM_240018400.1;orthologous_to=LmjF.24.1270_mRNA;ortholog_cluster=OG0002659;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_24 Pfam protein_match 460493 460942 . + . Parent=LTnewLM_240018400.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_24 AUGUSTUS gene 464931 465491 1 + . ID=LTnewLM_240018500 LTnewLM_24 AUGUSTUS mRNA 464931 465491 1 + . ID=LTnewLM_240018500.1;Parent=LTnewLM_240018500 LTnewLM_24 AUGUSTUS CDS 464931 465491 1 + 0 ID=LTnewLM_240018500.1:CDS:1;Parent=LTnewLM_240018500.1 ### LTnewLM_24 . polypeptide 464931 465491 . + . ID=LTnewLM_240018500.1:pep;Derives_from=LTnewLM_240018500.1;orthologous_to=LTnewLM_240018200.1,LmjF.24.1280_mRNA;ortholog_cluster=OG0000392;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_24 Pfam protein_match 464985 465425 . + . Parent=LTnewLM_240018500.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_24 AUGUSTUS gene 467743 468490 0.99 + . ID=LTnewLM_240018600 LTnewLM_24 AUGUSTUS mRNA 467743 468490 0.99 + . ID=LTnewLM_240018600.1;Parent=LTnewLM_240018600 LTnewLM_24 AUGUSTUS CDS 467743 467855 0.99 + 0 ID=LTnewLM_240018600.1:CDS:1;Parent=LTnewLM_240018600.1 LTnewLM_24 AUGUSTUS CDS 468088 468490 1 + 1 ID=LTnewLM_240018600.1:CDS:2;Parent=LTnewLM_240018600.1 ### LTnewLM_24 . polypeptide 467743 468490 . + . ID=LTnewLM_240018600.1:pep;Derives_from=LTnewLM_240018600.1;product=term%3Dhypothetical protein ### LTnewLM_24 Liftoff gene 469272 473528 . + . ID=LTnewLM_240018700;coverage=0.994;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1290_0 LTnewLM_24 Liftoff mRNA 469272 473528 . + . ID=LTnewLM_240018700.1;Parent=LTnewLM_240018700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 469272 473528 . + 0 ID=LTnewLM_240018700.1:CDS:1;Parent=LTnewLM_240018700.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 469272 473528 . + . ID=LTnewLM_240018700.1:pep;Derives_from=LTnewLM_240018700.1;orthologous_to=LmjF.24.1290_mRNA;ortholog_cluster=OG0002660;product=term%3DWASH complex subunit 4%2C N-terminal/WASH complex subunit 7/WASH complex subunit 7%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14745|Pfam:PF14744|Pfam:PF14746 LTnewLM_24 Pfam protein_match 469419 470651 . + . Parent=LTnewLM_240018700.1:pep;Name=PF14745;signature_desc=WASH complex subunit 4%2C N-terminal LTnewLM_24 Pfam protein_match 470934 471464 . + . Parent=LTnewLM_240018700.1:pep;Name=PF14745;signature_desc=WASH complex subunit 4%2C N-terminal LTnewLM_24 Pfam protein_match 471609 472655 . + . Parent=LTnewLM_240018700.1:pep;Name=PF14744;signature_desc=WASH complex subunit 7 LTnewLM_24 Pfam protein_match 472887 473396 . + . Parent=LTnewLM_240018700.1:pep;Name=PF14746;signature_desc=WASH complex subunit 7%2C C-terminal ### LTnewLM_24 AUGUSTUS gene 474717 477143 1 + . ID=LTnewLM_240018800 LTnewLM_24 AUGUSTUS mRNA 474717 477143 1 + . ID=LTnewLM_240018800.1;Parent=LTnewLM_240018800 LTnewLM_24 AUGUSTUS CDS 474717 477143 1 + 0 ID=LTnewLM_240018800.1:CDS:1;Parent=LTnewLM_240018800.1 ### LTnewLM_24 . polypeptide 474717 477143 . + . ID=LTnewLM_240018800.1:pep;Derives_from=LTnewLM_240018800.1;orthologous_to=LmjF.24.1300_mRNA;ortholog_cluster=OG0002661;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_24 Pfam protein_match 474771 474917 . + . Parent=LTnewLM_240018800.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_24 AUGUSTUS gene 482029 482793 1 + . ID=LTnewLM_240018900 LTnewLM_24 AUGUSTUS mRNA 482029 482793 1 + . ID=LTnewLM_240018900.1;Parent=LTnewLM_240018900 LTnewLM_24 AUGUSTUS CDS 482029 482793 1 + 0 ID=LTnewLM_240018900.1:CDS:1;Parent=LTnewLM_240018900.1 ### LTnewLM_24 . polypeptide 482029 482793 . + . ID=LTnewLM_240018900.1:pep;Derives_from=LTnewLM_240018900.1;orthologous_to=LmjF.24.1310_mRNA;ortholog_cluster=OG0002662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 483045 483774 0.88 + . ID=LTnewLM_240019000 LTnewLM_24 AUGUSTUS mRNA 483045 483774 0.88 + . ID=LTnewLM_240019000.1;Parent=LTnewLM_240019000 LTnewLM_24 AUGUSTUS CDS 483045 483058 0.9 + 0 ID=LTnewLM_240019000.1:CDS:1;Parent=LTnewLM_240019000.1 LTnewLM_24 AUGUSTUS CDS 483192 483774 0.88 + 1 ID=LTnewLM_240019000.1:CDS:2;Parent=LTnewLM_240019000.1 ### LTnewLM_24 . polypeptide 483045 483774 . + . ID=LTnewLM_240019000.1:pep;Derives_from=LTnewLM_240019000.1;orthologous_to=LmjF.24.1315_mRNA;ortholog_cluster=OG0002663;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_24 Pfam protein_match 483153 483551 . + . Parent=LTnewLM_240019000.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_24 AUGUSTUS gene 484067 484660 1 + . ID=LTnewLM_240019100 LTnewLM_24 AUGUSTUS mRNA 484067 484660 1 + . ID=LTnewLM_240019100.1;Parent=LTnewLM_240019100 LTnewLM_24 AUGUSTUS CDS 484067 484660 1 + 0 ID=LTnewLM_240019100.1:CDS:1;Parent=LTnewLM_240019100.1 ### LTnewLM_24 . polypeptide 484067 484660 . + . ID=LTnewLM_240019100.1:pep;Derives_from=LTnewLM_240019100.1;orthologous_to=LmjF.24.1320_mRNA;ortholog_cluster=OG0002664;product=term%3DTransport protein particle (TRAPP) component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04051 LTnewLM_24 Pfam protein_match 484187 484573 . + . Parent=LTnewLM_240019100.1:pep;Name=PF04051;signature_desc=Transport protein particle (TRAPP) component ### LTnewLM_24 AUGUSTUS gene 484933 485208 1 + . ID=LTnewLM_240019200 LTnewLM_24 AUGUSTUS mRNA 484933 485208 1 + . ID=LTnewLM_240019200.1;Parent=LTnewLM_240019200 LTnewLM_24 AUGUSTUS CDS 484933 485208 1 + 0 ID=LTnewLM_240019200.1:CDS:1;Parent=LTnewLM_240019200.1 ### LTnewLM_24 . polypeptide 484933 485208 . + . ID=LTnewLM_240019200.1:pep;Derives_from=LTnewLM_240019200.1;orthologous_to=LmjF.24.1330_mRNA;ortholog_cluster=OG0002665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 485646 488321 1 + . ID=LTnewLM_240019300 LTnewLM_24 AUGUSTUS mRNA 485646 488321 1 + . ID=LTnewLM_240019300.1;Parent=LTnewLM_240019300 LTnewLM_24 AUGUSTUS CDS 485646 488321 1 + 0 ID=LTnewLM_240019300.1:CDS:1;Parent=LTnewLM_240019300.1 ### LTnewLM_24 . polypeptide 485646 488321 . + . ID=LTnewLM_240019300.1:pep;Derives_from=LTnewLM_240019300.1;orthologous_to=LmjF.24.1340_mRNA;ortholog_cluster=OG0002666;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Ethanolamine utilisation - propanediol utilisation%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF10662;Ontology_term=GO:0005525,GO:0006576,GO:0003924,GO:0005524 LTnewLM_24 Pfam protein_match 486183 486668 . + . Parent=LTnewLM_240019300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_24 Pfam protein_match 486195 486518 . + . Parent=LTnewLM_240019300.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_24 Pfam protein_match 486201 486557 . + . Parent=LTnewLM_240019300.1:pep;Name=PF10662;signature_desc=Ethanolamine utilisation - propanediol utilisation;Ontology_term=GO:0005524,GO:0006576 ### LTnewLM_24 AUGUSTUS gene 488824 491490 1 + . ID=LTnewLM_240019400 LTnewLM_24 AUGUSTUS mRNA 488824 491490 1 + . ID=LTnewLM_240019400.1;Parent=LTnewLM_240019400 LTnewLM_24 AUGUSTUS CDS 488824 491490 1 + 0 ID=LTnewLM_240019400.1:CDS:1;Parent=LTnewLM_240019400.1 ### LTnewLM_24 . polypeptide 488824 491490 . + . ID=LTnewLM_240019400.1:pep;Derives_from=LTnewLM_240019400.1;orthologous_to=LmjF.24.1350_mRNA;ortholog_cluster=OG0002667;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 491035 491082 . + . Parent=LTnewLM_240019400.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 491149 491202 . + . Parent=LTnewLM_240019400.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 493175 495889 1 + . ID=LTnewLM_240019500 LTnewLM_24 AUGUSTUS mRNA 493175 495889 1 + . ID=LTnewLM_240019500.1;Parent=LTnewLM_240019500 LTnewLM_24 AUGUSTUS CDS 493175 495889 1 + 0 ID=LTnewLM_240019500.1:CDS:1;Parent=LTnewLM_240019500.1 ### LTnewLM_24 . polypeptide 493175 495889 . + . ID=LTnewLM_240019500.1:pep;Derives_from=LTnewLM_240019500.1;orthologous_to=LmjF.24.1360_mRNA;ortholog_cluster=OG0002668;product=term%3DDyggve-Melchior-Clausen syndrome protein/High-temperature-induced dauer-formation protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09742|Pfam:PF12722 LTnewLM_24 Pfam protein_match 493175 495814 . + . Parent=LTnewLM_240019500.1:pep;Name=PF09742;signature_desc=Dyggve-Melchior-Clausen syndrome protein LTnewLM_24 Pfam protein_match 494666 495205 . + . Parent=LTnewLM_240019500.1:pep;Name=PF12722;signature_desc=High-temperature-induced dauer-formation protein ### LTnewLM_24 AUGUSTUS gene 496909 497376 1 + . ID=LTnewLM_240019600 LTnewLM_24 AUGUSTUS mRNA 496909 497376 1 + . ID=LTnewLM_240019600.1;Parent=LTnewLM_240019600 LTnewLM_24 AUGUSTUS CDS 496909 497376 1 + 0 ID=LTnewLM_240019600.1:CDS:1;Parent=LTnewLM_240019600.1 ### LTnewLM_24 . polypeptide 496909 497376 . + . ID=LTnewLM_240019600.1:pep;Derives_from=LTnewLM_240019600.1;orthologous_to=LTnewLM_240019900.1,LmjF.24.1390_mRNA;ortholog_cluster=OG0000393;product=term%3DRING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13445|Pfam:PF00097;Ontology_term=GO:0046872 LTnewLM_24 Pfam protein_match 496957 497031 . + . Parent=LTnewLM_240019600.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_24 Pfam protein_match 496957 497037 . + . Parent=LTnewLM_240019600.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_24 AUGUSTUS gene 498941 500551 1 + . ID=LTnewLM_240019700 LTnewLM_24 AUGUSTUS mRNA 498941 500551 1 + . ID=LTnewLM_240019700.1;Parent=LTnewLM_240019700 LTnewLM_24 AUGUSTUS CDS 498941 500551 1 + 0 ID=LTnewLM_240019700.1:CDS:1;Parent=LTnewLM_240019700.1 ### LTnewLM_24 . polypeptide 498941 500551 . + . ID=LTnewLM_240019700.1:pep;Derives_from=LTnewLM_240019700.1;orthologous_to=LmjF.24.1370_mRNA;ortholog_cluster=OG0002669;product=term%3DHistone deacetylase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00850 LTnewLM_24 Pfam protein_match 499244 500143 . + . Parent=LTnewLM_240019700.1:pep;Name=PF00850;signature_desc=Histone deacetylase domain ### LTnewLM_24 AUGUSTUS gene 502746 503930 1 + . ID=LTnewLM_240019800 LTnewLM_24 AUGUSTUS mRNA 502746 503930 1 + . ID=LTnewLM_240019800.1;Parent=LTnewLM_240019800 LTnewLM_24 AUGUSTUS CDS 502746 503930 1 + 0 ID=LTnewLM_240019800.1:CDS:1;Parent=LTnewLM_240019800.1 ### LTnewLM_24 . polypeptide 502746 503930 . + . ID=LTnewLM_240019800.1:pep;Derives_from=LTnewLM_240019800.1;orthologous_to=LmjF.24.1380_mRNA;ortholog_cluster=OG0002670;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Ring finger domain/RING-type zinc-finger/zinc-RING finger domain/Secreted protein acidic and rich in cysteine Ca binding region/EF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13639|Pfam:PF13445|Pfam:PF13923|Pfam:PF00097|Pfam:PF14634|Pfam:PF10591|Pfam:PF13499|Pfam:PF13202|Pfam:PF13833;Ontology_term=GO:0005509,GO:0008270,GO:0005578,GO:0005515,GO:0046872,GO:0007165 LTnewLM_24 Pfam protein_match 502782 502910 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_24 Pfam protein_match 502788 502895 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_24 Pfam protein_match 502791 502865 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_24 Pfam protein_match 502791 502892 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_24 Pfam protein_match 502791 502892 . + . Parent=LTnewLM_240019800.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_24 Pfam protein_match 502791 502895 . + . Parent=LTnewLM_240019800.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_24 Pfam protein_match 503712 503903 . + . Parent=LTnewLM_240019800.1:pep;Name=PF10591;signature_desc=Secreted protein acidic and rich in cysteine Ca binding region;Ontology_term=GO:0005509,GO:0007165,GO:0005578 LTnewLM_24 Pfam protein_match 503730 503909 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_24 Pfam protein_match 503745 503804 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_24 Pfam protein_match 503847 503906 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_24 Pfam protein_match 503850 503909 . + . Parent=LTnewLM_240019800.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_24 AUGUSTUS gene 506039 507043 1 + . ID=LTnewLM_240019900 LTnewLM_24 AUGUSTUS mRNA 506039 507043 1 + . ID=LTnewLM_240019900.1;Parent=LTnewLM_240019900 LTnewLM_24 AUGUSTUS CDS 506039 507043 1 + 0 ID=LTnewLM_240019900.1:CDS:1;Parent=LTnewLM_240019900.1 ### LTnewLM_24 . polypeptide 506039 507043 . + . ID=LTnewLM_240019900.1:pep;Derives_from=LTnewLM_240019900.1;orthologous_to=LTnewLM_240019600.1,LmjF.24.1390_mRNA;ortholog_cluster=OG0000393;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Ring finger domain/RING-type zinc-finger/zinc-RING finger domain/EF-hand domain pair/EF hand/Secreted protein acidic and rich in cysteine Ca binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13639|Pfam:PF13445|Pfam:PF13923|Pfam:PF00097|Pfam:PF14634|Pfam:PF13499|Pfam:PF13202|Pfam:PF10591|Pfam:PF13833;Ontology_term=GO:0005509,GO:0008270,GO:0005578,GO:0005515,GO:0046872,GO:0007165 LTnewLM_24 Pfam protein_match 506075 506203 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_24 Pfam protein_match 506081 506188 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_24 Pfam protein_match 506084 506158 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_24 Pfam protein_match 506084 506185 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_24 Pfam protein_match 506084 506185 . + . Parent=LTnewLM_240019900.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_24 Pfam protein_match 506084 506188 . + . Parent=LTnewLM_240019900.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_24 Pfam protein_match 506600 506782 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_24 Pfam protein_match 506717 506776 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_24 Pfam protein_match 506828 507016 . + . Parent=LTnewLM_240019900.1:pep;Name=PF10591;signature_desc=Secreted protein acidic and rich in cysteine Ca binding region;Ontology_term=GO:0005509,GO:0007165,GO:0005578 LTnewLM_24 Pfam protein_match 506843 507022 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_24 Pfam protein_match 506858 506917 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_24 Pfam protein_match 506960 507019 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_24 Pfam protein_match 506963 507022 . + . Parent=LTnewLM_240019900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_24 AUGUSTUS gene 508901 509503 1 + . ID=LTnewLM_240020000 LTnewLM_24 AUGUSTUS mRNA 508901 509503 1 + . ID=LTnewLM_240020000.1;Parent=LTnewLM_240020000 LTnewLM_24 AUGUSTUS CDS 508901 509503 1 + 0 ID=LTnewLM_240020000.1:CDS:1;Parent=LTnewLM_240020000.1 ### LTnewLM_24 . polypeptide 508901 509503 . + . ID=LTnewLM_240020000.1:pep;Derives_from=LTnewLM_240020000.1;orthologous_to=LmjF.24.1400_mRNA;ortholog_cluster=OG0002671;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 511528 514398 1 + . ID=LTnewLM_240020100 LTnewLM_24 AUGUSTUS mRNA 511528 514398 1 + . ID=LTnewLM_240020100.1;Parent=LTnewLM_240020100 LTnewLM_24 AUGUSTUS CDS 511528 514398 1 + 0 ID=LTnewLM_240020100.1:CDS:1;Parent=LTnewLM_240020100.1 ### LTnewLM_24 . polypeptide 511528 514398 . + . ID=LTnewLM_240020100.1:pep;Derives_from=LTnewLM_240020100.1;orthologous_to=LmjF.24.1410_mRNA;ortholog_cluster=OG0002672;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 515457 519566 1 + . ID=LTnewLM_240020200 LTnewLM_24 AUGUSTUS mRNA 515457 519566 1 + . ID=LTnewLM_240020200.1;Parent=LTnewLM_240020200 LTnewLM_24 AUGUSTUS CDS 515457 519566 1 + 0 ID=LTnewLM_240020200.1:CDS:1;Parent=LTnewLM_240020200.1 ### LTnewLM_24 . polypeptide 515457 519566 . + . ID=LTnewLM_240020200.1:pep;Derives_from=LTnewLM_240020200.1;orthologous_to=LmjF.24.1420_mRNA;ortholog_cluster=OG0002673;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/DNA mismatch repair protein%2C C-terminal domain/DNA mismatch repair protein Mlh1 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF01119|Pfam:PF16413;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_24 Pfam protein_match 515529 515804 . + . Parent=LTnewLM_240020200.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_24 Pfam protein_match 516600 516866 . + . Parent=LTnewLM_240020200.1:pep;Name=PF01119;signature_desc=DNA mismatch repair protein%2C C-terminal domain;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_24 Pfam protein_match 518250 518534 . + . Parent=LTnewLM_240020200.1:pep;Name=PF16413;signature_desc=DNA mismatch repair protein Mlh1 C-terminus LTnewLM_24 Pfam protein_match 518829 519032 . + . Parent=LTnewLM_240020200.1:pep;Name=PF16413;signature_desc=DNA mismatch repair protein Mlh1 C-terminus LTnewLM_24 Pfam protein_match 519258 519560 . + . Parent=LTnewLM_240020200.1:pep;Name=PF16413;signature_desc=DNA mismatch repair protein Mlh1 C-terminus ### LTnewLM_24 AUGUSTUS gene 521566 531390 1 + . ID=LTnewLM_240020300 LTnewLM_24 AUGUSTUS mRNA 521566 531390 1 + . ID=LTnewLM_240020300.1;Parent=LTnewLM_240020300 LTnewLM_24 AUGUSTUS CDS 521566 531390 1 + 0 ID=LTnewLM_240020300.1:CDS:1;Parent=LTnewLM_240020300.1 ### LTnewLM_24 . polypeptide 521566 531390 . + . ID=LTnewLM_240020300.1:pep;Derives_from=LTnewLM_240020300.1;orthologous_to=LmjF.24.1430_mRNA;ortholog_cluster=OG0002674;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_24 Pfam protein_match 524629 524892 . + . Parent=LTnewLM_240020300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_24 Pfam protein_match 524668 524892 . + . Parent=LTnewLM_240020300.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_24 Pfam protein_match 525334 526275 . + . Parent=LTnewLM_240020300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_24 AUGUSTUS gene 532067 534808 1 + . ID=LTnewLM_240020400 LTnewLM_24 AUGUSTUS mRNA 532067 534808 1 + . ID=LTnewLM_240020400.1;Parent=LTnewLM_240020400 LTnewLM_24 AUGUSTUS CDS 532067 534808 1 + 0 ID=LTnewLM_240020400.1:CDS:1;Parent=LTnewLM_240020400.1 ### LTnewLM_24 . polypeptide 532067 534808 . + . ID=LTnewLM_240020400.1:pep;Derives_from=LTnewLM_240020400.1;orthologous_to=LmjF.24.1435_mRNA;ortholog_cluster=OG0002675;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 539170 540786 . + . ID=LTnewLM_240020500:pseudogene;coverage=1.0;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1440_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 539170 540786 . + . ID=LTnewLM_240020500.1;Parent=LTnewLM_240020500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 539170 540786 . + . ID=LTnewLM_240020500.1:pseudogenic_exon:1;Parent=LTnewLM_240020500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 539170 540786 . + . ID=LTnewLM_240020500.1:pep;Derives_from=LTnewLM_240020500.1;orthologous_to=LmjF.24.1440_mRNA;ortholog_cluster=OG0007531;product=term%3DHpcH/HpaI aldolase/citrate lyase family/C-C_Bond_Lyase of the TIM-Barrel fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03328|Pfam:PF15617;Ontology_term=GO:0003824 LTnewLM_24 Pfam protein_match 539647 539814 . + . Parent=LTnewLM_240020500.1:pep;Name=PF03328;signature_desc=HpcH/HpaI aldolase/citrate lyase family;Ontology_term=GO:0003824 LTnewLM_24 Pfam protein_match 539893 540429 . + . Parent=LTnewLM_240020500.1:pep;Name=PF03328;signature_desc=HpcH/HpaI aldolase/citrate lyase family;Ontology_term=GO:0003824 LTnewLM_24 Pfam protein_match 540364 540591 . + . Parent=LTnewLM_240020500.1:pep;Name=PF15617;signature_desc=C-C_Bond_Lyase of the TIM-Barrel fold ### LTnewLM_24 AUGUSTUS gene 541588 543414 1 + . ID=LTnewLM_240020600 LTnewLM_24 AUGUSTUS mRNA 541588 543414 1 + . ID=LTnewLM_240020600.1;Parent=LTnewLM_240020600 LTnewLM_24 AUGUSTUS CDS 541588 543414 1 + 0 ID=LTnewLM_240020600.1:CDS:1;Parent=LTnewLM_240020600.1 ### LTnewLM_24 . polypeptide 541588 543414 . + . ID=LTnewLM_240020600.1:pep;Derives_from=LTnewLM_240020600.1;orthologous_to=LmjF.24.1450_mRNA;ortholog_cluster=OG0002676;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293|Pfam:PF17667;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_24 Pfam protein_match 542578 543393 . + . Parent=LTnewLM_240020600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 542584 543381 . + . Parent=LTnewLM_240020600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_24 Pfam protein_match 542719 543051 . + . Parent=LTnewLM_240020600.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 LTnewLM_24 Pfam protein_match 542920 543126 . + . Parent=LTnewLM_240020600.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_24 AUGUSTUS gene 545760 555864 1.42 + . ID=LTnewLM_240020700 LTnewLM_24 AUGUSTUS mRNA 545760 555864 0.48 + . ID=LTnewLM_240020700.1;Parent=LTnewLM_240020700 LTnewLM_24 AUGUSTUS CDS 545760 550739 0.56 + 0 ID=LTnewLM_240020700.1:CDS:1;Parent=LTnewLM_240020700.1 LTnewLM_24 AUGUSTUS CDS 550789 555864 0.57 + 0 ID=LTnewLM_240020700.1:CDS:2;Parent=LTnewLM_240020700.1 LTnewLM_24 AUGUSTUS mRNA 555652 555864 0.94 + . ID=LTnewLM_240020700.2;Parent=LTnewLM_240020700 LTnewLM_24 AUGUSTUS CDS 555652 555864 0.94 + 0 ID=LTnewLM_240020700.2:CDS:1;Parent=LTnewLM_240020700.2 ### LTnewLM_24 . polypeptide 545760 555864 . + . ID=LTnewLM_240020700.1:pep;Derives_from=LTnewLM_240020700.1;orthologous_to=LTnewLM_240020700.2;ortholog_cluster=OG0002677;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_24 Pfam protein_match 552981 553847 . + . Parent=LTnewLM_240020700.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_24 Pfam protein_match 554412 554753 . + . Parent=LTnewLM_240020700.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_24 . polypeptide 555652 555864 . + . ID=LTnewLM_240020700.2:pep;Derives_from=LTnewLM_240020700.2;orthologous_to=LTnewLM_240020700.1;ortholog_cluster=OG0002677;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 556667 559105 1 + . ID=LTnewLM_240020800 LTnewLM_24 AUGUSTUS mRNA 556667 559105 1 + . ID=LTnewLM_240020800.1;Parent=LTnewLM_240020800 LTnewLM_24 AUGUSTUS CDS 556667 559105 1 + 0 ID=LTnewLM_240020800.1:CDS:1;Parent=LTnewLM_240020800.1 ### LTnewLM_24 . polypeptide 556667 559105 . + . ID=LTnewLM_240020800.1:pep;Derives_from=LTnewLM_240020800.1;orthologous_to=LmjF.24.1460_mRNA;ortholog_cluster=OG0002678;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 560346 569111 1 + . ID=LTnewLM_240020900 LTnewLM_24 AUGUSTUS mRNA 560346 569111 1 + . ID=LTnewLM_240020900.1;Parent=LTnewLM_240020900 LTnewLM_24 AUGUSTUS CDS 560346 569111 1 + 0 ID=LTnewLM_240020900.1:CDS:1;Parent=LTnewLM_240020900.1 ### LTnewLM_24 . polypeptide 560346 569111 . + . ID=LTnewLM_240020900.1:pep;Derives_from=LTnewLM_240020900.1;orthologous_to=LmjF.24.1470_mRNA;ortholog_cluster=OG0002679;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 571786 573635 0.99 + . ID=LTnewLM_240021000 LTnewLM_24 AUGUSTUS mRNA 571786 573635 0.99 + . ID=LTnewLM_240021000.1;Parent=LTnewLM_240021000 LTnewLM_24 AUGUSTUS CDS 571786 573497 0.99 + 0 ID=LTnewLM_240021000.1:CDS:1;Parent=LTnewLM_240021000.1 LTnewLM_24 AUGUSTUS CDS 573542 573635 1 + 1 ID=LTnewLM_240021000.1:CDS:2;Parent=LTnewLM_240021000.1 ### LTnewLM_24 . polypeptide 571786 573635 . + . ID=LTnewLM_240021000.1:pep;Derives_from=LTnewLM_240021000.1;orthologous_to=LmjF.24.1480_mRNA;ortholog_cluster=OG0002680;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 574174 575514 1 + . ID=LTnewLM_240021100 LTnewLM_24 AUGUSTUS mRNA 574174 575514 1 + . ID=LTnewLM_240021100.1;Parent=LTnewLM_240021100 LTnewLM_24 AUGUSTUS CDS 574174 575514 1 + 0 ID=LTnewLM_240021100.1:CDS:1;Parent=LTnewLM_240021100.1 ### LTnewLM_24 . polypeptide 574174 575514 . + . ID=LTnewLM_240021100.1:pep;Derives_from=LTnewLM_240021100.1;orthologous_to=LmjF.24.1490_mRNA;ortholog_cluster=OG0002681;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 574816 574908 . + . Parent=LTnewLM_240021100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 576828 577340 1 + . ID=LTnewLM_240021200 LTnewLM_24 AUGUSTUS mRNA 576828 577340 1 + . ID=LTnewLM_240021200.1;Parent=LTnewLM_240021200 LTnewLM_24 AUGUSTUS CDS 576828 577340 1 + 0 ID=LTnewLM_240021200.1:CDS:1;Parent=LTnewLM_240021200.1 ### LTnewLM_24 . polypeptide 576828 577340 . + . ID=LTnewLM_240021200.1:pep;Derives_from=LTnewLM_240021200.1;orthologous_to=LTnewLM_240021300.1,LmjF.24.1500_mRNA,LmjF.24.1510_mRNA;ortholog_cluster=OG0000174;product=term%3DTranslationally controlled tumour protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00838 LTnewLM_24 Pfam protein_match 576828 577322 . + . Parent=LTnewLM_240021200.1:pep;Name=PF00838;signature_desc=Translationally controlled tumour protein ### LTnewLM_24 AUGUSTUS gene 578857 579369 1 + . ID=LTnewLM_240021300 LTnewLM_24 AUGUSTUS mRNA 578857 579369 1 + . ID=LTnewLM_240021300.1;Parent=LTnewLM_240021300 LTnewLM_24 AUGUSTUS CDS 578857 579369 1 + 0 ID=LTnewLM_240021300.1:CDS:1;Parent=LTnewLM_240021300.1 ### LTnewLM_24 . polypeptide 578857 579369 . + . ID=LTnewLM_240021300.1:pep;Derives_from=LTnewLM_240021300.1;orthologous_to=LTnewLM_240021200.1,LmjF.24.1500_mRNA,LmjF.24.1510_mRNA;ortholog_cluster=OG0000174;product=term%3DTranslationally controlled tumour protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00838 LTnewLM_24 Pfam protein_match 578857 579351 . + . Parent=LTnewLM_240021300.1:pep;Name=PF00838;signature_desc=Translationally controlled tumour protein ### LTnewLM_24 AUGUSTUS gene 581102 584557 1 + . ID=LTnewLM_240021400 LTnewLM_24 AUGUSTUS mRNA 581102 584557 1 + . ID=LTnewLM_240021400.1;Parent=LTnewLM_240021400 LTnewLM_24 AUGUSTUS CDS 581102 584557 1 + 0 ID=LTnewLM_240021400.1:CDS:1;Parent=LTnewLM_240021400.1 ### LTnewLM_24 . polypeptide 581102 584557 . + . ID=LTnewLM_240021400.1:pep;Derives_from=LTnewLM_240021400.1;orthologous_to=LmjF.24.1520_mRNA;ortholog_cluster=OG0002682;product=term%3DERCC4 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02732;Ontology_term=GO:0004518,GO:0003677 LTnewLM_24 Pfam protein_match 583442 584023 . + . Parent=LTnewLM_240021400.1:pep;Name=PF02732;signature_desc=ERCC4 domain;Ontology_term=GO:0003677,GO:0004518 ### LTnewLM_24 . pseudogene 585779 591678 . + . ID=LTnewLM_240021500:pseudogene;coverage=0.990;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1530_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 585779 591678 . + . ID=LTnewLM_240021500.1;Parent=LTnewLM_240021500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 585779 591678 . + . ID=LTnewLM_240021500.1:pseudogenic_exon:1;Parent=LTnewLM_240021500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 585779 591678 . + . ID=LTnewLM_240021500.1:pep;Derives_from=LTnewLM_240021500.1;product=term%3Dhypothetical protein ### LTnewLM_24 AUGUSTUS gene 592502 593002 1 + . ID=LTnewLM_240021600 LTnewLM_24 AUGUSTUS mRNA 592502 593002 1 + . ID=LTnewLM_240021600.1;Parent=LTnewLM_240021600 LTnewLM_24 AUGUSTUS CDS 592502 593002 1 + 0 ID=LTnewLM_240021600.1:CDS:1;Parent=LTnewLM_240021600.1 ### LTnewLM_24 . polypeptide 592502 593002 . + . ID=LTnewLM_240021600.1:pep;Derives_from=LTnewLM_240021600.1;orthologous_to=LmjF.24.1540_mRNA;ortholog_cluster=OG0002683;product=term%3DClathrin adaptor complex small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01217 LTnewLM_24 Pfam protein_match 592502 592942 . + . Parent=LTnewLM_240021600.1:pep;Name=PF01217;signature_desc=Clathrin adaptor complex small chain ### LTnewLM_24 AUGUSTUS gene 593671 596532 1 + . ID=LTnewLM_240021700 LTnewLM_24 AUGUSTUS mRNA 593671 596532 1 + . ID=LTnewLM_240021700.1;Parent=LTnewLM_240021700 LTnewLM_24 AUGUSTUS CDS 593671 596532 1 + 0 ID=LTnewLM_240021700.1:CDS:1;Parent=LTnewLM_240021700.1 ### LTnewLM_24 . polypeptide 593671 596532 . + . ID=LTnewLM_240021700.1:pep;Derives_from=LTnewLM_240021700.1;orthologous_to=LmjF.24.1550_mRNA;ortholog_cluster=OG0002684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 597328 599130 1 + . ID=LTnewLM_240021800 LTnewLM_24 AUGUSTUS mRNA 597328 599130 1 + . ID=LTnewLM_240021800.1;Parent=LTnewLM_240021800 LTnewLM_24 AUGUSTUS CDS 597328 599130 1 + 0 ID=LTnewLM_240021800.1:CDS:1;Parent=LTnewLM_240021800.1 ### LTnewLM_24 . polypeptide 597328 599130 . + . ID=LTnewLM_240021800.1:pep;Derives_from=LTnewLM_240021800.1;orthologous_to=LmjF.24.1560_mRNA;ortholog_cluster=OG0002685;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 608667 611111 1 + . ID=LTnewLM_240021900 LTnewLM_24 AUGUSTUS mRNA 608667 611111 1 + . ID=LTnewLM_240021900.1;Parent=LTnewLM_240021900 LTnewLM_24 AUGUSTUS CDS 608667 611111 1 + 0 ID=LTnewLM_240021900.1:CDS:1;Parent=LTnewLM_240021900.1 ### LTnewLM_24 . polypeptide 608667 611111 . + . ID=LTnewLM_240021900.1:pep;Derives_from=LTnewLM_240021900.1;orthologous_to=LmjF.24.1570_mRNA;ortholog_cluster=OG0002686;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_24 Pfam protein_match 609672 609878 . + . Parent=LTnewLM_240021900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_24 Pfam protein_match 609942 610064 . + . Parent=LTnewLM_240021900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_24 AUGUSTUS gene 620575 621765 1 + . ID=LTnewLM_240022000 LTnewLM_24 AUGUSTUS mRNA 620575 621765 1 + . ID=LTnewLM_240022000.1;Parent=LTnewLM_240022000 LTnewLM_24 AUGUSTUS CDS 620575 621765 1 + 0 ID=LTnewLM_240022000.1:CDS:1;Parent=LTnewLM_240022000.1 ### LTnewLM_24 . polypeptide 620575 621765 . + . ID=LTnewLM_240022000.1:pep;Derives_from=LTnewLM_240022000.1;orthologous_to=LmjF.24.1580_mRNA;ortholog_cluster=OG0002687;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 622601 624271 1 + . ID=LTnewLM_240022100 LTnewLM_24 AUGUSTUS mRNA 622601 624271 1 + . ID=LTnewLM_240022100.1;Parent=LTnewLM_240022100 LTnewLM_24 AUGUSTUS CDS 622601 624271 1 + 0 ID=LTnewLM_240022100.1:CDS:1;Parent=LTnewLM_240022100.1 ### LTnewLM_24 . polypeptide 622601 624271 . + . ID=LTnewLM_240022100.1:pep;Derives_from=LTnewLM_240022100.1;orthologous_to=LmjF.24.1590_mRNA;ortholog_cluster=OG0002688;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 625423 625617 . + . ID=LTnewLM_240022200;coverage=1.0;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.1600_0 LTnewLM_24 Liftoff mRNA 625423 625617 . + . ID=LTnewLM_240022200.1;Parent=LTnewLM_240022200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 625423 625617 . + 0 ID=LTnewLM_240022200.1:CDS:1;Parent=LTnewLM_240022200.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 625423 625617 . + . ID=LTnewLM_240022200.1:pep;Derives_from=LTnewLM_240022200.1;orthologous_to=LmjF.24.1600_mRNA;ortholog_cluster=OG0002689;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 626943 627302 1 + . ID=LTnewLM_240022300 LTnewLM_24 AUGUSTUS mRNA 626943 627302 1 + . ID=LTnewLM_240022300.1;Parent=LTnewLM_240022300 LTnewLM_24 AUGUSTUS CDS 626943 627302 1 + 0 ID=LTnewLM_240022300.1:CDS:1;Parent=LTnewLM_240022300.1 ### LTnewLM_24 . polypeptide 626943 627302 . + . ID=LTnewLM_240022300.1:pep;Derives_from=LTnewLM_240022300.1;orthologous_to=LmjF.24.1610_mRNA;ortholog_cluster=OG0002690;product=term%3DAnaphase-promoting complex subunit 11 RING-H2 finger/Zinc finger%2C C3HC4 type (RING finger)/RING-H2 zinc finger domain/Ring finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12861|Pfam:PF00097|Pfam:PF12678|Pfam:PF13639;Ontology_term=GO:0004842,GO:0005680,GO:0005515,GO:0046872,GO:0008270 LTnewLM_24 Pfam protein_match 627057 627263 . + . Parent=LTnewLM_240022300.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_24 Pfam protein_match 627087 627245 . + . Parent=LTnewLM_240022300.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_24 Pfam protein_match 627087 627251 . + . Parent=LTnewLM_240022300.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 LTnewLM_24 Pfam protein_match 627120 627245 . + . Parent=LTnewLM_240022300.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 ### LTnewLM_24 AUGUSTUS gene 628413 629474 1 + . ID=LTnewLM_240022400 LTnewLM_24 AUGUSTUS mRNA 628413 629474 1 + . ID=LTnewLM_240022400.1;Parent=LTnewLM_240022400 LTnewLM_24 AUGUSTUS CDS 628413 629474 1 + 0 ID=LTnewLM_240022400.1:CDS:1;Parent=LTnewLM_240022400.1 ### LTnewLM_24 . polypeptide 628413 629474 . + . ID=LTnewLM_240022400.1:pep;Derives_from=LTnewLM_240022400.1;orthologous_to=LmjF.24.1620_mRNA;ortholog_cluster=OG0002691;product=term%3DGlutathione S-transferase N-terminal domain/Outer mitochondrial membrane transport complex protein/Glutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17172|Pfam:PF10568|Pfam:PF17171;Ontology_term=GO:0006626,GO:0005741 LTnewLM_24 Pfam protein_match 628746 629027 . + . Parent=LTnewLM_240022400.1:pep;Name=PF17172;signature_desc=Glutathione S-transferase N-terminal domain LTnewLM_24 Pfam protein_match 628752 629030 . + . Parent=LTnewLM_240022400.1:pep;Name=PF10568;signature_desc=Outer mitochondrial membrane transport complex protein;Ontology_term=GO:0006626,GO:0005741 LTnewLM_24 Pfam protein_match 629187 629381 . + . Parent=LTnewLM_240022400.1:pep;Name=PF17171;signature_desc=Glutathione S-transferase%2C C-terminal domain ### LTnewLM_24 AUGUSTUS gene 632664 634487 1 + . ID=LTnewLM_240022500 LTnewLM_24 AUGUSTUS mRNA 632664 634487 1 + . ID=LTnewLM_240022500.1;Parent=LTnewLM_240022500 LTnewLM_24 AUGUSTUS CDS 632664 634487 1 + 0 ID=LTnewLM_240022500.1:CDS:1;Parent=LTnewLM_240022500.1 ### LTnewLM_24 . polypeptide 632664 634487 . + . ID=LTnewLM_240022500.1:pep;Derives_from=LTnewLM_240022500.1;orthologous_to=LmjF.24.1630_mRNA;ortholog_cluster=OG0002692;product=term%3DFAD binding domain/Fumarate reductase flavoprotein C-term%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00890|Pfam:PF02910;Ontology_term=GO:0055114,GO:0016491 LTnewLM_24 Pfam protein_match 632730 633911 . + . Parent=LTnewLM_240022500.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_24 Pfam protein_match 634080 634481 . + . Parent=LTnewLM_240022500.1:pep;Name=PF02910;signature_desc=Fumarate reductase flavoprotein C-term;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_24 AUGUSTUS gene 638558 640297 1 + . ID=LTnewLM_240022600 LTnewLM_24 AUGUSTUS mRNA 638558 640297 1 + . ID=LTnewLM_240022600.1;Parent=LTnewLM_240022600 LTnewLM_24 AUGUSTUS CDS 638558 640297 1 + 0 ID=LTnewLM_240022600.1:CDS:1;Parent=LTnewLM_240022600.1 ### LTnewLM_24 . polypeptide 638558 640297 . + . ID=LTnewLM_240022600.1:pep;Derives_from=LTnewLM_240022600.1;orthologous_to=LmjF.24.1640_mRNA;ortholog_cluster=OG0002693;product=term%3DNAD dependent epimerase/dehydratase family/Male sterility protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01370|Pfam:PF07993|Pfam:PF03015;Ontology_term=GO:0050662,GO:0080019,GO:0003824 LTnewLM_24 Pfam protein_match 638597 639298 . + . Parent=LTnewLM_240022600.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_24 Pfam protein_match 638603 639466 . + . Parent=LTnewLM_240022600.1:pep;Name=PF07993;signature_desc=Male sterility protein LTnewLM_24 Pfam protein_match 640004 640222 . + . Parent=LTnewLM_240022600.1:pep;Name=PF03015;signature_desc=Male sterility protein;Ontology_term=GO:0080019 ### LTnewLM_24 GenomeTools gene 642110 642207 56.5 - . ID=LTnewLM_240022700 LTnewLM_24 INFERNAL snRNA 642110 642207 56.5 - . ID=LTnewLM_240022700:snRNA;Parent=LTnewLM_240022700;gc=0.49;evalue=1.2e-13;score=56.5;model_name=U6;model_acc=RF00026;model_range=1-106 ### LTnewLM_24 Aragorn_1.2.36 gene 642308 642380 . + . ID=LTnewLM_240022800 LTnewLM_24 Aragorn_1.2.36 tRNA 642308 642380 . + . ID=LTnewLM_240022800:tRNA;Parent=LTnewLM_240022800;aa=Gln;anticodon=ctg;gc_content=53.4 ### LTnewLM_24 AUGUSTUS gene 642312 643204 0.53 - . ID=LTnewLM_240022900 LTnewLM_24 AUGUSTUS mRNA 642312 643204 0.53 - . ID=LTnewLM_240022900.1;Parent=LTnewLM_240022900 LTnewLM_24 AUGUSTUS CDS 642312 642340 0.57 - 2 ID=LTnewLM_240022900.1:CDS:1;Parent=LTnewLM_240022900.1 LTnewLM_24 AUGUSTUS CDS 642991 643204 0.69 - 0 ID=LTnewLM_240022900.1:CDS:2;Parent=LTnewLM_240022900.1 ### LTnewLM_24 . polypeptide 642312 643204 . - . ID=LTnewLM_240022900.1:pep;Derives_from=LTnewLM_240022900.1;product=term%3Dhypothetical protein ### LTnewLM_24 Aragorn_1.2.36 gene 642590 642671 . - . ID=LTnewLM_240023000 LTnewLM_24 Aragorn_1.2.36 tRNA 642590 642671 . - . ID=LTnewLM_240023000:tRNA;Parent=LTnewLM_240023000;aa=Leu;anticodon=taa;gc_content=57.3 ### LTnewLM_24 Aragorn_1.2.36 gene 642758 642832 . + . ID=LTnewLM_240023100 LTnewLM_24 Aragorn_1.2.36 tRNA 642758 642832 . + . ID=LTnewLM_240023100:tRNA;Parent=LTnewLM_240023100;aa=Ile;anticodon=aat;gc_content=56.0 ### LTnewLM_24 Aragorn_1.2.36 gene 644925 644999 . + . ID=LTnewLM_240023200 LTnewLM_24 Aragorn_1.2.36 tRNA 644925 644999 . + . ID=LTnewLM_240023200:tRNA;Parent=LTnewLM_240023200;aa=Ile;anticodon=aat;gc_content=56.0 ### LTnewLM_24 AUGUSTUS gene 645512 647116 1 - . ID=LTnewLM_240023300 LTnewLM_24 AUGUSTUS mRNA 645512 647116 1 - . ID=LTnewLM_240023300.1;Parent=LTnewLM_240023300 LTnewLM_24 AUGUSTUS CDS 645512 647116 1 - 0 ID=LTnewLM_240023300.1:CDS:1;Parent=LTnewLM_240023300.1 ### LTnewLM_24 . polypeptide 645512 647116 . - . ID=LTnewLM_240023300.1:pep;Derives_from=LTnewLM_240023300.1;orthologous_to=LmjF.24.1650_mRNA;ortholog_cluster=OG0002694;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 647882 649435 1 - . ID=LTnewLM_240023400 LTnewLM_24 AUGUSTUS mRNA 647882 649435 1 - . ID=LTnewLM_240023400.1;Parent=LTnewLM_240023400 LTnewLM_24 AUGUSTUS CDS 647882 649435 1 - 0 ID=LTnewLM_240023400.1:CDS:1;Parent=LTnewLM_240023400.1 ### LTnewLM_24 . polypeptide 647882 649435 . - . ID=LTnewLM_240023400.1:pep;Derives_from=LTnewLM_240023400.1;orthologous_to=LmjF.24.1660_mRNA;ortholog_cluster=OG0002695;product=term%3DSpoU rRNA Methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00588;Ontology_term=GO:0003723,GO:0008173,GO:0006396 LTnewLM_24 Pfam protein_match 648035 648586 . - . Parent=LTnewLM_240023400.1:pep;Name=PF00588;signature_desc=SpoU rRNA Methylase family;Ontology_term=GO:0003723,GO:0008173,GO:0006396 ### LTnewLM_24 AUGUSTUS gene 650049 650873 1 - . ID=LTnewLM_240023500 LTnewLM_24 AUGUSTUS mRNA 650049 650873 1 - . ID=LTnewLM_240023500.1;Parent=LTnewLM_240023500 LTnewLM_24 AUGUSTUS CDS 650049 650873 1 - 0 ID=LTnewLM_240023500.1:CDS:1;Parent=LTnewLM_240023500.1 ### LTnewLM_24 . polypeptide 650049 650873 . - . ID=LTnewLM_240023500.1:pep;Derives_from=LTnewLM_240023500.1;orthologous_to=LmjF.24.1670_mRNA;ortholog_cluster=OG0002696;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 651462 652796 1 - . ID=LTnewLM_240023600 LTnewLM_24 AUGUSTUS mRNA 651462 652796 1 - . ID=LTnewLM_240023600.1;Parent=LTnewLM_240023600 LTnewLM_24 AUGUSTUS CDS 651462 652796 1 - 0 ID=LTnewLM_240023600.1:CDS:1;Parent=LTnewLM_240023600.1 ### LTnewLM_24 . polypeptide 651462 652796 . - . ID=LTnewLM_240023600.1:pep;Derives_from=LTnewLM_240023600.1;orthologous_to=LmjF.24.1680_mRNA;ortholog_cluster=OG0002697;product=term%3Dvon Willebrand factor type A domain/Ssl1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13519|Pfam:PF04056 LTnewLM_24 Pfam protein_match 652164 652394 . - . Parent=LTnewLM_240023600.1:pep;Name=PF04056;signature_desc=Ssl1-like LTnewLM_24 Pfam protein_match 652485 652787 . - . Parent=LTnewLM_240023600.1:pep;Name=PF13519;signature_desc=von Willebrand factor type A domain LTnewLM_24 Pfam protein_match 652488 652775 . - . Parent=LTnewLM_240023600.1:pep;Name=PF04056;signature_desc=Ssl1-like ### LTnewLM_24 AUGUSTUS gene 653974 655113 1 - . ID=LTnewLM_240023700 LTnewLM_24 AUGUSTUS mRNA 653974 655113 1 - . ID=LTnewLM_240023700.1;Parent=LTnewLM_240023700 LTnewLM_24 AUGUSTUS CDS 653974 655113 1 - 0 ID=LTnewLM_240023700.1:CDS:1;Parent=LTnewLM_240023700.1 ### LTnewLM_24 . polypeptide 653974 655113 . - . ID=LTnewLM_240023700.1:pep;Derives_from=LTnewLM_240023700.1;orthologous_to=LmjF.24.1690_mRNA;ortholog_cluster=OG0002698;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 654076 654765 . - . Parent=LTnewLM_240023700.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 655928 657337 1 - . ID=LTnewLM_240023800 LTnewLM_24 AUGUSTUS mRNA 655928 657337 1 - . ID=LTnewLM_240023800.1;Parent=LTnewLM_240023800 LTnewLM_24 AUGUSTUS CDS 655928 657337 1 - 0 ID=LTnewLM_240023800.1:CDS:1;Parent=LTnewLM_240023800.1 ### LTnewLM_24 . polypeptide 655928 657337 . - . ID=LTnewLM_240023800.1:pep;Derives_from=LTnewLM_240023800.1;orthologous_to=LmjF.24.1700_mRNA;ortholog_cluster=OG0002699;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 658965 659543 1 - . ID=LTnewLM_240023900 LTnewLM_24 AUGUSTUS mRNA 658965 659543 1 - . ID=LTnewLM_240023900.1;Parent=LTnewLM_240023900 LTnewLM_24 AUGUSTUS CDS 658965 659543 1 - 0 ID=LTnewLM_240023900.1:CDS:1;Parent=LTnewLM_240023900.1 ### LTnewLM_24 . polypeptide 658965 659543 . - . ID=LTnewLM_240023900.1:pep;Derives_from=LTnewLM_240023900.1;orthologous_to=LmjF.24.1710_mRNA;ortholog_cluster=OG0002700;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_24 Pfam protein_match 658992 659384 . - . Parent=LTnewLM_240023900.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_24 AUGUSTUS gene 661544 664054 1 - . ID=LTnewLM_240024000 LTnewLM_24 AUGUSTUS mRNA 661544 664054 1 - . ID=LTnewLM_240024000.1;Parent=LTnewLM_240024000 LTnewLM_24 AUGUSTUS CDS 661544 664054 1 - 0 ID=LTnewLM_240024000.1:CDS:1;Parent=LTnewLM_240024000.1 ### LTnewLM_24 . polypeptide 661544 664054 . - . ID=LTnewLM_240024000.1:pep;Derives_from=LTnewLM_240024000.1;orthologous_to=LmjF.24.1720_mRNA;ortholog_cluster=OG0002701;product=term%3DAnaphase-promoting complex subunit 4 WD40 domain/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12894|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 661802 661900 . - . Parent=LTnewLM_240024000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 662054 662170 . - . Parent=LTnewLM_240024000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 662243 662344 . - . Parent=LTnewLM_240024000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 662429 662536 . - . Parent=LTnewLM_240024000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 662483 662647 . - . Parent=LTnewLM_240024000.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain ### LTnewLM_24 AUGUSTUS gene 667681 672024 1 - . ID=LTnewLM_240024100 LTnewLM_24 AUGUSTUS mRNA 667681 672024 1 - . ID=LTnewLM_240024100.1;Parent=LTnewLM_240024100 LTnewLM_24 AUGUSTUS CDS 667681 672024 1 - 0 ID=LTnewLM_240024100.1:CDS:1;Parent=LTnewLM_240024100.1 ### LTnewLM_24 . polypeptide 667681 672024 . - . ID=LTnewLM_240024100.1:pep;Derives_from=LTnewLM_240024100.1;orthologous_to=LmjF.24.1730_mRNA;ortholog_cluster=OG0002702;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_24 Pfam protein_match 669496 670293 . - . Parent=LTnewLM_240024100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 669529 670146 . - . Parent=LTnewLM_240024100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_24 AUGUSTUS gene 672891 673994 1 - . ID=LTnewLM_240024200 LTnewLM_24 AUGUSTUS mRNA 672891 673994 1 - . ID=LTnewLM_240024200.1;Parent=LTnewLM_240024200 LTnewLM_24 AUGUSTUS CDS 672891 673994 1 - 0 ID=LTnewLM_240024200.1:CDS:1;Parent=LTnewLM_240024200.1 ### LTnewLM_24 . polypeptide 672891 673994 . - . ID=LTnewLM_240024200.1:pep;Derives_from=LTnewLM_240024200.1;orthologous_to=LmjF.24.1740_mRNA;ortholog_cluster=OG0002703;product=term%3DAminomethyltransferase folate-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01571 LTnewLM_24 Pfam protein_match 673659 673946 . - . Parent=LTnewLM_240024200.1:pep;Name=PF01571;signature_desc=Aminomethyltransferase folate-binding domain ### LTnewLM_24 AUGUSTUS gene 674818 677034 1 - . ID=LTnewLM_240024300 LTnewLM_24 AUGUSTUS mRNA 674818 677034 1 - . ID=LTnewLM_240024300.1;Parent=LTnewLM_240024300 LTnewLM_24 AUGUSTUS CDS 674818 677034 1 - 0 ID=LTnewLM_240024300.1:CDS:1;Parent=LTnewLM_240024300.1 ### LTnewLM_24 . polypeptide 674818 677034 . - . ID=LTnewLM_240024300.1:pep;Derives_from=LTnewLM_240024300.1;orthologous_to=LmjF.24.1750_mRNA;ortholog_cluster=OG0002704;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 674980 675177 . - . Parent=LTnewLM_240024300.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_24 AUGUSTUS gene 677870 678682 1 - . ID=LTnewLM_240024400 LTnewLM_24 AUGUSTUS mRNA 677870 678682 1 - . ID=LTnewLM_240024400.1;Parent=LTnewLM_240024400 LTnewLM_24 AUGUSTUS CDS 677870 678682 1 - 0 ID=LTnewLM_240024400.1:CDS:1;Parent=LTnewLM_240024400.1 ### LTnewLM_24 . polypeptide 677870 678682 . - . ID=LTnewLM_240024400.1:pep;Derives_from=LTnewLM_240024400.1;orthologous_to=LmjF.24.1760_mRNA;ortholog_cluster=OG0002705;product=term%3DKinase binding protein CGI-121%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08617 LTnewLM_24 Pfam protein_match 677900 678646 . - . Parent=LTnewLM_240024400.1:pep;Name=PF08617;signature_desc=Kinase binding protein CGI-121 ### LTnewLM_24 AUGUSTUS gene 680296 680649 1 - . ID=LTnewLM_240024500 LTnewLM_24 AUGUSTUS mRNA 680296 680649 1 - . ID=LTnewLM_240024500.1;Parent=LTnewLM_240024500 LTnewLM_24 AUGUSTUS CDS 680296 680649 1 - 0 ID=LTnewLM_240024500.1:CDS:1;Parent=LTnewLM_240024500.1 ### LTnewLM_24 . polypeptide 680296 680649 . - . ID=LTnewLM_240024500.1:pep;Derives_from=LTnewLM_240024500.1;orthologous_to=LmjF.24.1770_mRNA;ortholog_cluster=OG0002706;product=term%3DChagasin family peptidase inhibitor I42%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09394 LTnewLM_24 Pfam protein_match 680314 680595 . - . Parent=LTnewLM_240024500.1:pep;Name=PF09394;signature_desc=Chagasin family peptidase inhibitor I42 ### LTnewLM_24 AUGUSTUS gene 682042 685992 1 - . ID=LTnewLM_240024600 LTnewLM_24 AUGUSTUS mRNA 682042 685992 1 - . ID=LTnewLM_240024600.1;Parent=LTnewLM_240024600 LTnewLM_24 AUGUSTUS CDS 682042 685992 1 - 0 ID=LTnewLM_240024600.1:CDS:1;Parent=LTnewLM_240024600.1 ### LTnewLM_24 . polypeptide 682042 685992 . - . ID=LTnewLM_240024600.1:pep;Derives_from=LTnewLM_240024600.1;orthologous_to=LmjF.24.1780_mRNA;ortholog_cluster=OG0002707;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 689553 690272 1 - . ID=LTnewLM_240024700 LTnewLM_24 AUGUSTUS mRNA 689553 690272 1 - . ID=LTnewLM_240024700.1;Parent=LTnewLM_240024700 LTnewLM_24 AUGUSTUS CDS 689553 690272 1 - 0 ID=LTnewLM_240024700.1:CDS:1;Parent=LTnewLM_240024700.1 ### LTnewLM_24 . polypeptide 689553 690272 . - . ID=LTnewLM_240024700.1:pep;Derives_from=LTnewLM_240024700.1;orthologous_to=LmjF.24.1790_mRNA;ortholog_cluster=OG0002708;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_24 Pfam protein_match 689658 689882 . - . Parent=LTnewLM_240024700.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_24 AUGUSTUS gene 691417 691737 1 - . ID=LTnewLM_240024800 LTnewLM_24 AUGUSTUS mRNA 691417 691737 1 - . ID=LTnewLM_240024800.1;Parent=LTnewLM_240024800 LTnewLM_24 AUGUSTUS CDS 691417 691737 1 - 0 ID=LTnewLM_240024800.1:CDS:1;Parent=LTnewLM_240024800.1 ### LTnewLM_24 . polypeptide 691417 691737 . - . ID=LTnewLM_240024800.1:pep;Derives_from=LTnewLM_240024800.1;orthologous_to=LmjF.24.1800_mRNA;ortholog_cluster=OG0002709;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 692345 694081 . - . ID=LTnewLM_240024900;coverage=0.999;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.1810_0 LTnewLM_24 Liftoff mRNA 692345 694081 . - . ID=LTnewLM_240024900.1;Parent=LTnewLM_240024900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 692345 694081 . - 0 ID=LTnewLM_240024900.1:CDS:1;Parent=LTnewLM_240024900.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 692345 694081 . - . ID=LTnewLM_240024900.1:pep;Derives_from=LTnewLM_240024900.1;orthologous_to=LmjF.24.1810_mRNA;ortholog_cluster=OG0002710;product=term%3Dshort chain dehydrogenase/KR domain/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF08659|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_24 Pfam protein_match 692984 693388 . - . Parent=LTnewLM_240024900.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_24 Pfam protein_match 692996 693409 . - . Parent=LTnewLM_240024900.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_24 Pfam protein_match 693095 693406 . - . Parent=LTnewLM_240024900.1:pep;Name=PF08659;signature_desc=KR domain ### LTnewLM_24 AUGUSTUS gene 694733 696256 1 - . ID=LTnewLM_240025000 LTnewLM_24 AUGUSTUS mRNA 694733 696256 1 - . ID=LTnewLM_240025000.1;Parent=LTnewLM_240025000 LTnewLM_24 AUGUSTUS CDS 694733 696256 1 - 0 ID=LTnewLM_240025000.1:CDS:1;Parent=LTnewLM_240025000.1 ### LTnewLM_24 . polypeptide 694733 696256 . - . ID=LTnewLM_240025000.1:pep;Derives_from=LTnewLM_240025000.1;orthologous_to=LmjF.24.1820_mRNA;ortholog_cluster=OG0002711;product=term%3DKR domain/short chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08659|Pfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_24 Pfam protein_match 695225 695515 . - . Parent=LTnewLM_240025000.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_24 Pfam protein_match 695243 695527 . - . Parent=LTnewLM_240025000.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_24 Pfam protein_match 695360 695713 . - . Parent=LTnewLM_240025000.1:pep;Name=PF08659;signature_desc=KR domain ### LTnewLM_24 AUGUSTUS gene 697146 697868 1 - . ID=LTnewLM_240025100 LTnewLM_24 AUGUSTUS mRNA 697146 697868 1 - . ID=LTnewLM_240025100.1;Parent=LTnewLM_240025100 LTnewLM_24 AUGUSTUS CDS 697146 697868 1 - 0 ID=LTnewLM_240025100.1:CDS:1;Parent=LTnewLM_240025100.1 ### LTnewLM_24 . polypeptide 697146 697868 . - . ID=LTnewLM_240025100.1:pep;Derives_from=LTnewLM_240025100.1;orthologous_to=LmjF.24.1830_mRNA;ortholog_cluster=OG0002712;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 698424 699260 1 - . ID=LTnewLM_240025200 LTnewLM_24 AUGUSTUS mRNA 698424 699260 1 - . ID=LTnewLM_240025200.1;Parent=LTnewLM_240025200 LTnewLM_24 AUGUSTUS CDS 698424 699260 1 - 0 ID=LTnewLM_240025200.1:CDS:1;Parent=LTnewLM_240025200.1 ### LTnewLM_24 . polypeptide 698424 699260 . - . ID=LTnewLM_240025200.1:pep;Derives_from=LTnewLM_240025200.1;orthologous_to=LmjF.24.1840_mRNA;ortholog_cluster=OG0002713;product=term%3DPhospholipase/Carboxylesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02230;Ontology_term=GO:0016787 LTnewLM_24 Pfam protein_match 698448 699080 . - . Parent=LTnewLM_240025200.1:pep;Name=PF02230;signature_desc=Phospholipase/Carboxylesterase;Ontology_term=GO:0016787 ### LTnewLM_24 AUGUSTUS gene 700318 701553 1 - . ID=LTnewLM_240025300 LTnewLM_24 AUGUSTUS mRNA 700318 701553 1 - . ID=LTnewLM_240025300.1;Parent=LTnewLM_240025300 LTnewLM_24 AUGUSTUS CDS 700318 701553 1 - 0 ID=LTnewLM_240025300.1:CDS:1;Parent=LTnewLM_240025300.1 ### LTnewLM_24 . polypeptide 700318 701553 . - . ID=LTnewLM_240025300.1:pep;Derives_from=LTnewLM_240025300.1;orthologous_to=LmjF.24.1850_mRNA;ortholog_cluster=OG0002714;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Aragorn_1.2.36 gene 701928 701999 . - . ID=LTnewLM_240025400 LTnewLM_24 Aragorn_1.2.36 tRNA 701928 701999 . - . ID=LTnewLM_240025400:tRNA;Parent=LTnewLM_240025400;aa=Asp;anticodon=gtc;gc_content=58.3 ### LTnewLM_24 AUGUSTUS gene 703627 705237 1 - . ID=LTnewLM_240025500 LTnewLM_24 AUGUSTUS mRNA 703627 705237 1 - . ID=LTnewLM_240025500.1;Parent=LTnewLM_240025500 LTnewLM_24 AUGUSTUS CDS 703627 705237 1 - 0 ID=LTnewLM_240025500.1:CDS:1;Parent=LTnewLM_240025500.1 ### LTnewLM_24 . polypeptide 703627 705237 . - . ID=LTnewLM_240025500.1:pep;Derives_from=LTnewLM_240025500.1;orthologous_to=LmjF.24.1860_mRNA;ortholog_cluster=OG0002715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 706819 710679 1 - . ID=LTnewLM_240025600 LTnewLM_24 AUGUSTUS mRNA 706819 710679 1 - . ID=LTnewLM_240025600.1;Parent=LTnewLM_240025600 LTnewLM_24 AUGUSTUS CDS 706819 710679 1 - 0 ID=LTnewLM_240025600.1:CDS:1;Parent=LTnewLM_240025600.1 ### LTnewLM_24 . polypeptide 706819 710679 . - . ID=LTnewLM_240025600.1:pep;Derives_from=LTnewLM_240025600.1;orthologous_to=LmjF.24.1870_mRNA;ortholog_cluster=OG0002716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 715787 718582 1 - . ID=LTnewLM_240025700 LTnewLM_24 AUGUSTUS mRNA 715787 718582 1 - . ID=LTnewLM_240025700.1;Parent=LTnewLM_240025700 LTnewLM_24 AUGUSTUS CDS 715787 718582 1 - 0 ID=LTnewLM_240025700.1:CDS:1;Parent=LTnewLM_240025700.1 ### LTnewLM_24 . polypeptide 715787 718582 . - . ID=LTnewLM_240025700.1:pep;Derives_from=LTnewLM_240025700.1;orthologous_to=LmjF.24.1880_mRNA;ortholog_cluster=OG0002717;product=term%3DCyclin/Cyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613|Pfam:PF00134;Ontology_term=GO:0000079,GO:0019901 LTnewLM_24 Pfam protein_match 716453 716728 . - . Parent=LTnewLM_240025700.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain LTnewLM_24 Pfam protein_match 716453 716731 . - . Parent=LTnewLM_240025700.1:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 ### LTnewLM_24 AUGUSTUS gene 729404 731575 0.93 - . ID=LTnewLM_240025800 LTnewLM_24 AUGUSTUS mRNA 729404 731575 0.93 - . ID=LTnewLM_240025800.1;Parent=LTnewLM_240025800 LTnewLM_24 AUGUSTUS CDS 729404 731575 0.93 - 0 ID=LTnewLM_240025800.1:CDS:1;Parent=LTnewLM_240025800.1 ### LTnewLM_24 . polypeptide 729404 731575 . - . ID=LTnewLM_240025800.1:pep;Derives_from=LTnewLM_240025800.1;orthologous_to=LmjF.24.1890_mRNA;ortholog_cluster=OG0002718;product=term%3DCyclin/Cyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613|Pfam:PF00134;Ontology_term=GO:0000079,GO:0019901 LTnewLM_24 Pfam protein_match 730478 730759 . - . Parent=LTnewLM_240025800.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain LTnewLM_24 Pfam protein_match 730508 730846 . - . Parent=LTnewLM_240025800.1:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 ### LTnewLM_24 AUGUSTUS gene 733436 735922 1 - . ID=LTnewLM_240025900 LTnewLM_24 AUGUSTUS mRNA 733436 735922 1 - . ID=LTnewLM_240025900.1;Parent=LTnewLM_240025900 LTnewLM_24 AUGUSTUS CDS 733436 735922 1 - 0 ID=LTnewLM_240025900.1:CDS:1;Parent=LTnewLM_240025900.1 ### LTnewLM_24 . polypeptide 733436 735922 . - . ID=LTnewLM_240025900.1:pep;Derives_from=LTnewLM_240025900.1;orthologous_to=LmjF.24.1900_mRNA;ortholog_cluster=OG0002719;product=term%3DWD domain%2C G-beta repeat/PFU (PLAA family ubiquitin binding)/PUL domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF09070|Pfam:PF08324;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 733544 734284 . - . Parent=LTnewLM_240025900.1:pep;Name=PF08324;signature_desc=PUL domain LTnewLM_24 Pfam protein_match 734450 734794 . - . Parent=LTnewLM_240025900.1:pep;Name=PF09070;signature_desc=PFU (PLAA family ubiquitin binding) LTnewLM_24 Pfam protein_match 734966 735049 . - . Parent=LTnewLM_240025900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 735098 735199 . - . Parent=LTnewLM_240025900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 735221 735328 . - . Parent=LTnewLM_240025900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 735344 735454 . - . Parent=LTnewLM_240025900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_24 . pseudogene 736441 738092 . - . ID=LTnewLM_240026000:pseudogene;coverage=0.999;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1905_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 736441 738092 . - . ID=LTnewLM_240026000.1;Parent=LTnewLM_240026000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 736441 738092 . - . ID=LTnewLM_240026000.1:pseudogenic_exon:1;Parent=LTnewLM_240026000.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 736441 738092 . - . ID=LTnewLM_240026000.1:pep;Derives_from=LTnewLM_240026000.1;product=term%3Dhypothetical protein ### LTnewLM_24 AUGUSTUS gene 738407 738772 1 - . ID=LTnewLM_240026100 LTnewLM_24 AUGUSTUS mRNA 738407 738772 1 - . ID=LTnewLM_240026100.1;Parent=LTnewLM_240026100 LTnewLM_24 AUGUSTUS CDS 738407 738772 1 - 0 ID=LTnewLM_240026100.1:CDS:1;Parent=LTnewLM_240026100.1 ### LTnewLM_24 . polypeptide 738407 738772 . - . ID=LTnewLM_240026100.1:pep;Derives_from=LTnewLM_240026100.1;orthologous_to=LmjF.24.1910_mRNA;ortholog_cluster=OG0002720;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 739381 740949 1 - . ID=LTnewLM_240026200 LTnewLM_24 AUGUSTUS mRNA 739381 740949 1 - . ID=LTnewLM_240026200.1;Parent=LTnewLM_240026200 LTnewLM_24 AUGUSTUS CDS 739381 740949 1 - 0 ID=LTnewLM_240026200.1:CDS:1;Parent=LTnewLM_240026200.1 ### LTnewLM_24 . polypeptide 739381 740949 . - . ID=LTnewLM_240026200.1:pep;Derives_from=LTnewLM_240026200.1;orthologous_to=LmjF.24.1920_mRNA;ortholog_cluster=OG0002721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 742069 744189 1 - . ID=LTnewLM_240026300 LTnewLM_24 AUGUSTUS mRNA 742069 744189 1 - . ID=LTnewLM_240026300.1;Parent=LTnewLM_240026300 LTnewLM_24 AUGUSTUS CDS 742069 744189 1 - 0 ID=LTnewLM_240026300.1:CDS:1;Parent=LTnewLM_240026300.1 ### LTnewLM_24 . polypeptide 742069 744189 . - . ID=LTnewLM_240026300.1:pep;Derives_from=LTnewLM_240026300.1;orthologous_to=LmjF.24.1930_mRNA;ortholog_cluster=OG0002722;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 745849 746949 1 - . ID=LTnewLM_240026400 LTnewLM_24 AUGUSTUS mRNA 745849 746949 1 - . ID=LTnewLM_240026400.1;Parent=LTnewLM_240026400 LTnewLM_24 AUGUSTUS CDS 745849 746949 1 - 0 ID=LTnewLM_240026400.1:CDS:1;Parent=LTnewLM_240026400.1 ### LTnewLM_24 . polypeptide 745849 746949 . - . ID=LTnewLM_240026400.1:pep;Derives_from=LTnewLM_240026400.1;orthologous_to=LmjF.24.1940_mRNA;ortholog_cluster=OG0002723;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 747743 750118 1 - . ID=LTnewLM_240026500 LTnewLM_24 AUGUSTUS mRNA 747743 750118 1 - . ID=LTnewLM_240026500.1;Parent=LTnewLM_240026500 LTnewLM_24 AUGUSTUS CDS 747743 750118 1 - 0 ID=LTnewLM_240026500.1:CDS:1;Parent=LTnewLM_240026500.1 ### LTnewLM_24 . polypeptide 747743 750118 . - . ID=LTnewLM_240026500.1:pep;Derives_from=LTnewLM_240026500.1;orthologous_to=LmjF.24.1950_mRNA;ortholog_cluster=OG0002724;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 . pseudogene 750732 753687 . - . ID=LTnewLM_240026600:pseudogene;coverage=1.0;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.1960_0;has_internal_stop=true LTnewLM_24 . pseudogenic_transcript 750732 753687 . - . ID=LTnewLM_240026600.1;Parent=LTnewLM_240026600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_24 . pseudogenic_exon 750732 753687 . - . ID=LTnewLM_240026600.1:pseudogenic_exon:1;Parent=LTnewLM_240026600.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 750732 753687 . - . ID=LTnewLM_240026600.1:pep;Derives_from=LTnewLM_240026600.1;orthologous_to=LmjF.24.1960_mRNA;ortholog_cluster=OG0007532;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 754737 757004 1 - . ID=LTnewLM_240026700 LTnewLM_24 AUGUSTUS mRNA 754737 757004 1 - . ID=LTnewLM_240026700.1;Parent=LTnewLM_240026700 LTnewLM_24 AUGUSTUS CDS 754737 757004 1 - 0 ID=LTnewLM_240026700.1:CDS:1;Parent=LTnewLM_240026700.1 ### LTnewLM_24 . polypeptide 754737 757004 . - . ID=LTnewLM_240026700.1:pep;Derives_from=LTnewLM_240026700.1;orthologous_to=LmjF.24.1970_mRNA;ortholog_cluster=OG0002725;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 758353 759153 1 - . ID=LTnewLM_240026800 LTnewLM_24 AUGUSTUS mRNA 758353 759153 1 - . ID=LTnewLM_240026800.1;Parent=LTnewLM_240026800 LTnewLM_24 AUGUSTUS CDS 758353 759153 1 - 0 ID=LTnewLM_240026800.1:CDS:1;Parent=LTnewLM_240026800.1 ### LTnewLM_24 . polypeptide 758353 759153 . - . ID=LTnewLM_240026800.1:pep;Derives_from=LTnewLM_240026800.1;orthologous_to=LmjF.24.1980_mRNA;ortholog_cluster=OG0002726;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 760103 761161 1 - . ID=LTnewLM_240026900 LTnewLM_24 AUGUSTUS mRNA 760103 761161 1 - . ID=LTnewLM_240026900.1;Parent=LTnewLM_240026900 LTnewLM_24 AUGUSTUS CDS 760103 761161 1 - 0 ID=LTnewLM_240026900.1:CDS:1;Parent=LTnewLM_240026900.1 ### LTnewLM_24 . polypeptide 760103 761161 . - . ID=LTnewLM_240026900.1:pep;Derives_from=LTnewLM_240026900.1;orthologous_to=LmjF.24.1990_mRNA;ortholog_cluster=OG0002727;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 761573 763342 1 - . ID=LTnewLM_240027000 LTnewLM_24 AUGUSTUS mRNA 761573 763342 1 - . ID=LTnewLM_240027000.1;Parent=LTnewLM_240027000 LTnewLM_24 AUGUSTUS CDS 761573 763342 1 - 0 ID=LTnewLM_240027000.1:CDS:1;Parent=LTnewLM_240027000.1 ### LTnewLM_24 . polypeptide 761573 763342 . - . ID=LTnewLM_240027000.1:pep;Derives_from=LTnewLM_240027000.1;orthologous_to=LmjF.24.2000_mRNA;ortholog_cluster=OG0002728;product=term%3DPhosphorylated CTD interacting factor 1 WW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12237 LTnewLM_24 Pfam protein_match 762173 762502 . - . Parent=LTnewLM_240027000.1:pep;Name=PF12237;signature_desc=Phosphorylated CTD interacting factor 1 WW domain ### LTnewLM_24 AUGUSTUS gene 763816 767085 1 - . ID=LTnewLM_240027100 LTnewLM_24 AUGUSTUS mRNA 763816 767085 1 - . ID=LTnewLM_240027100.1;Parent=LTnewLM_240027100 LTnewLM_24 AUGUSTUS CDS 763816 767085 1 - 0 ID=LTnewLM_240027100.1:CDS:1;Parent=LTnewLM_240027100.1 ### LTnewLM_24 . polypeptide 763816 767085 . - . ID=LTnewLM_240027100.1:pep;Derives_from=LTnewLM_240027100.1;orthologous_to=LmjF.24.2010_mRNA;ortholog_cluster=OG0002729;product=term%3DPhosphoinositide 3-kinase family%2C accessory domain (PIK domain)/Phosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00613|Pfam:PF00454;Ontology_term=GO:0016773 LTnewLM_24 Pfam protein_match 764020 764391 . - . Parent=LTnewLM_240027100.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_24 Pfam protein_match 764389 764580 . - . Parent=LTnewLM_240027100.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_24 Pfam protein_match 765544 765942 . - . Parent=LTnewLM_240027100.1:pep;Name=PF00613;signature_desc=Phosphoinositide 3-kinase family%2C accessory domain (PIK domain) ### LTnewLM_24 AUGUSTUS gene 768003 772340 1 - . ID=LTnewLM_240027200 LTnewLM_24 AUGUSTUS mRNA 768003 772340 1 - . ID=LTnewLM_240027200.1;Parent=LTnewLM_240027200 LTnewLM_24 AUGUSTUS CDS 768003 772340 1 - 0 ID=LTnewLM_240027200.1:CDS:1;Parent=LTnewLM_240027200.1 ### LTnewLM_24 . polypeptide 768003 772340 . - . ID=LTnewLM_240027200.1:pep;Derives_from=LTnewLM_240027200.1;orthologous_to=LmjF.24.2020_mRNA;ortholog_cluster=OG0002730;product=term%3DTubulin folding cofactor D C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12612 LTnewLM_24 Pfam protein_match 768471 769109 . - . Parent=LTnewLM_240027200.1:pep;Name=PF12612;signature_desc=Tubulin folding cofactor D C terminal ### LTnewLM_24 AUGUSTUS gene 773652 774431 1 - . ID=LTnewLM_240027300 LTnewLM_24 AUGUSTUS mRNA 773652 774431 1 - . ID=LTnewLM_240027300.1;Parent=LTnewLM_240027300 LTnewLM_24 AUGUSTUS CDS 773652 774431 1 - 0 ID=LTnewLM_240027300.1:CDS:1;Parent=LTnewLM_240027300.1 ### LTnewLM_24 . polypeptide 773652 774431 . - . ID=LTnewLM_240027300.1:pep;Derives_from=LTnewLM_240027300.1;orthologous_to=LmjF.24.2030_mRNA;ortholog_cluster=OG0002731;product=term%3Dshort chain dehydrogenase/NAD dependent epimerase/dehydratase family/KR domain/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF01370|Pfam:PF08659|Pfam:PF13561;Ontology_term=GO:0003824,GO:0016491,GO:0008152,GO:0050662 LTnewLM_24 Pfam protein_match 773679 774380 . - . Parent=LTnewLM_240027300.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_24 Pfam protein_match 773820 774395 . - . Parent=LTnewLM_240027300.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_24 Pfam protein_match 773922 774392 . - . Parent=LTnewLM_240027300.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_24 Pfam protein_match 774204 774392 . - . Parent=LTnewLM_240027300.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 ### LTnewLM_24 AUGUSTUS gene 775554 775820 1 - . ID=LTnewLM_240027400 LTnewLM_24 AUGUSTUS mRNA 775554 775820 1 - . ID=LTnewLM_240027400.1;Parent=LTnewLM_240027400 LTnewLM_24 AUGUSTUS CDS 775554 775820 1 - 0 ID=LTnewLM_240027400.1:CDS:1;Parent=LTnewLM_240027400.1 ### LTnewLM_24 . polypeptide 775554 775820 . - . ID=LTnewLM_240027400.1:pep;Derives_from=LTnewLM_240027400.1;orthologous_to=LmjF.24.2040_mRNA;ortholog_cluster=OG0002732;product=term%3DBolA-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01722 LTnewLM_24 Pfam protein_match 775563 775703 . - . Parent=LTnewLM_240027400.1:pep;Name=PF01722;signature_desc=BolA-like protein ### LTnewLM_24 AUGUSTUS gene 776808 777323 1 - . ID=LTnewLM_240027500 LTnewLM_24 AUGUSTUS mRNA 776808 777323 1 - . ID=LTnewLM_240027500.1;Parent=LTnewLM_240027500 LTnewLM_24 AUGUSTUS CDS 776808 777323 1 - 0 ID=LTnewLM_240027500.1:CDS:1;Parent=LTnewLM_240027500.1 ### LTnewLM_24 . polypeptide 776808 777323 . - . ID=LTnewLM_240027500.1:pep;Derives_from=LTnewLM_240027500.1;product=term%3DOpioid growth factor receptor (OGFr) conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04664;Ontology_term=GO:0016020,GO:0004872 LTnewLM_24 Pfam protein_match 776898 777071 . - . Parent=LTnewLM_240027500.1:pep;Name=PF04664;signature_desc=Opioid growth factor receptor (OGFr) conserved region;Ontology_term=GO:0004872,GO:0016020 ### LTnewLM_24 AUGUSTUS gene 778301 778732 1 - . ID=LTnewLM_240027600 LTnewLM_24 AUGUSTUS mRNA 778301 778732 1 - . ID=LTnewLM_240027600.1;Parent=LTnewLM_240027600 LTnewLM_24 AUGUSTUS CDS 778301 778732 1 - 0 ID=LTnewLM_240027600.1:CDS:1;Parent=LTnewLM_240027600.1 ### LTnewLM_24 . polypeptide 778301 778732 . - . ID=LTnewLM_240027600.1:pep;Derives_from=LTnewLM_240027600.1;orthologous_to=LTnewLM_350022000.1,LmjF.24.2050_mRNA,LmjF.35.1670_mRNA;ortholog_cluster=OG0000175;product=term%3DRibosomal proteins L26 eukaryotic%2C L24P archaeal/KOW motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16906|Pfam:PF00467 LTnewLM_24 Pfam protein_match 778379 778711 . - . Parent=LTnewLM_240027600.1:pep;Name=PF16906;signature_desc=Ribosomal proteins L26 eukaryotic%2C L24P archaeal LTnewLM_24 Pfam protein_match 778499 778588 . - . Parent=LTnewLM_240027600.1:pep;Name=PF00467;signature_desc=KOW motif ### LTnewLM_24 AUGUSTUS gene 780893 782908 1 - . ID=LTnewLM_240027700 LTnewLM_24 AUGUSTUS mRNA 780893 782908 1 - . ID=LTnewLM_240027700.1;Parent=LTnewLM_240027700 LTnewLM_24 AUGUSTUS CDS 780893 782908 1 - 0 ID=LTnewLM_240027700.1:CDS:1;Parent=LTnewLM_240027700.1 ### LTnewLM_24 . polypeptide 780893 782908 . - . ID=LTnewLM_240027700.1:pep;Derives_from=LTnewLM_240027700.1;orthologous_to=LmjF.24.2060_mRNA;ortholog_cluster=OG0002733;product=term%3DTransketolase%2C thiamine diphosphate binding domain/Transketolase%2C pyrimidine binding domain/Transketolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00456|Pfam:PF02779|Pfam:PF02780;Ontology_term=GO:0003824,GO:0008152 LTnewLM_24 Pfam protein_match 780977 781300 . - . Parent=LTnewLM_240027700.1:pep;Name=PF02780;signature_desc=Transketolase%2C C-terminal domain;Ontology_term=GO:0003824,GO:0008152 LTnewLM_24 Pfam protein_match 781349 781864 . - . Parent=LTnewLM_240027700.1:pep;Name=PF02779;signature_desc=Transketolase%2C pyrimidine binding domain LTnewLM_24 Pfam protein_match 781904 782896 . - . Parent=LTnewLM_240027700.1:pep;Name=PF00456;signature_desc=Transketolase%2C thiamine diphosphate binding domain ### LTnewLM_24 AUGUSTUS gene 784550 785212 1 - . ID=LTnewLM_240027800 LTnewLM_24 AUGUSTUS mRNA 784550 785212 1 - . ID=LTnewLM_240027800.1;Parent=LTnewLM_240027800 LTnewLM_24 AUGUSTUS CDS 784550 785212 1 - 0 ID=LTnewLM_240027800.1:CDS:1;Parent=LTnewLM_240027800.1 ### LTnewLM_24 . polypeptide 784550 785212 . - . ID=LTnewLM_240027800.1:pep;Derives_from=LTnewLM_240027800.1;orthologous_to=LTnewLM_240027900.1,LmjF.24.2070_mRNA,LmjF.24.2080_mRNA;ortholog_cluster=OG0000176;product=term%3DRibosomal protein S8e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01201 LTnewLM_24 Pfam protein_match 784607 785197 . - . Parent=LTnewLM_240027800.1:pep;Name=PF01201;signature_desc=Ribosomal protein S8e ### LTnewLM_24 AUGUSTUS gene 786140 786802 1 - . ID=LTnewLM_240027900 LTnewLM_24 AUGUSTUS mRNA 786140 786802 1 - . ID=LTnewLM_240027900.1;Parent=LTnewLM_240027900 LTnewLM_24 AUGUSTUS CDS 786140 786802 1 - 0 ID=LTnewLM_240027900.1:CDS:1;Parent=LTnewLM_240027900.1 ### LTnewLM_24 . polypeptide 786140 786802 . - . ID=LTnewLM_240027900.1:pep;Derives_from=LTnewLM_240027900.1;orthologous_to=LTnewLM_240027800.1,LmjF.24.2070_mRNA,LmjF.24.2080_mRNA;ortholog_cluster=OG0000176;product=term%3DRibosomal protein S8e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01201 LTnewLM_24 Pfam protein_match 786197 786787 . - . Parent=LTnewLM_240027900.1:pep;Name=PF01201;signature_desc=Ribosomal protein S8e ### LTnewLM_24 AUGUSTUS gene 787714 788850 1 - . ID=LTnewLM_240028000 LTnewLM_24 AUGUSTUS mRNA 787714 788850 1 - . ID=LTnewLM_240028000.1;Parent=LTnewLM_240028000 LTnewLM_24 AUGUSTUS CDS 787714 788850 1 - 0 ID=LTnewLM_240028000.1:CDS:1;Parent=LTnewLM_240028000.1 ### LTnewLM_24 . polypeptide 787714 788850 . - . ID=LTnewLM_240028000.1:pep;Derives_from=LTnewLM_240028000.1;orthologous_to=LmjF.24.2090_mRNA;ortholog_cluster=OG0002734;product=term%3DKelch motif/Galactose oxidase%2C central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13854|Pfam:PF13418|Pfam:PF13964|Pfam:PF01344|Pfam:PF13415|Pfam:PF07646;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 788029 788145 . - . Parent=LTnewLM_240028000.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 788032 788115 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 788284 788433 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13415;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 788308 788460 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 788317 788460 . - . Parent=LTnewLM_240028000.1:pep;Name=PF07646;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 788323 788460 . - . Parent=LTnewLM_240028000.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 788323 788460 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13964;signature_desc=Kelch motif LTnewLM_24 Pfam protein_match 788593 788745 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13415;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 788641 788763 . - . Parent=LTnewLM_240028000.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 788641 788772 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13964;signature_desc=Kelch motif LTnewLM_24 Pfam protein_match 788641 788781 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_24 Pfam protein_match 788662 788787 . - . Parent=LTnewLM_240028000.1:pep;Name=PF13854;signature_desc=Kelch motif ### LTnewLM_24 AUGUSTUS gene 789607 790533 1 - . ID=LTnewLM_240028100 LTnewLM_24 AUGUSTUS mRNA 789607 790533 1 - . ID=LTnewLM_240028100.1;Parent=LTnewLM_240028100 LTnewLM_24 AUGUSTUS CDS 789607 790533 1 - 0 ID=LTnewLM_240028100.1:CDS:1;Parent=LTnewLM_240028100.1 ### LTnewLM_24 . polypeptide 789607 790533 . - . ID=LTnewLM_240028100.1:pep;Derives_from=LTnewLM_240028100.1;orthologous_to=LmjF.24.2100_mRNA;ortholog_cluster=OG0002735;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 793609 795114 1 - . ID=LTnewLM_240028200 LTnewLM_24 AUGUSTUS mRNA 793609 795114 1 - . ID=LTnewLM_240028200.1;Parent=LTnewLM_240028200 LTnewLM_24 AUGUSTUS CDS 793609 795114 1 - 0 ID=LTnewLM_240028200.1:CDS:1;Parent=LTnewLM_240028200.1 ### LTnewLM_24 . polypeptide 793609 795114 . - . ID=LTnewLM_240028200.1:pep;Derives_from=LTnewLM_240028200.1;orthologous_to=LmjF.24.2110_mRNA;ortholog_cluster=OG0002736;product=term%3DHydroxymethylglutaryl-coenzyme A synthase N terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01154;Ontology_term=GO:0008299,GO:0004421 LTnewLM_24 Pfam protein_match 794575 795084 . - . Parent=LTnewLM_240028200.1:pep;Name=PF01154;signature_desc=Hydroxymethylglutaryl-coenzyme A synthase N terminal;Ontology_term=GO:0004421,GO:0008299 ### LTnewLM_24 AUGUSTUS gene 795864 799460 1 - . ID=LTnewLM_240028300 LTnewLM_24 AUGUSTUS mRNA 795864 799460 1 - . ID=LTnewLM_240028300.1;Parent=LTnewLM_240028300 LTnewLM_24 AUGUSTUS CDS 795864 799460 1 - 0 ID=LTnewLM_240028300.1:CDS:1;Parent=LTnewLM_240028300.1 ### LTnewLM_24 . polypeptide 795864 799460 . - . ID=LTnewLM_240028300.1:pep;Derives_from=LTnewLM_240028300.1;orthologous_to=LmjF.24.2120_mRNA;ortholog_cluster=OG0002737;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 800800 801267 1 - . ID=LTnewLM_240028400 LTnewLM_24 AUGUSTUS mRNA 800800 801267 1 - . ID=LTnewLM_240028400.1;Parent=LTnewLM_240028400 LTnewLM_24 AUGUSTUS CDS 800800 801267 1 - 0 ID=LTnewLM_240028400.1:CDS:1;Parent=LTnewLM_240028400.1 ### LTnewLM_24 . polypeptide 800800 801267 . - . ID=LTnewLM_240028400.1:pep;Derives_from=LTnewLM_240028400.1;orthologous_to=LmjF.24.2130_mRNA;ortholog_cluster=OG0002738;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_24 Pfam protein_match 800833 801231 . - . Parent=LTnewLM_240028400.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_24 AUGUSTUS gene 802594 803574 1 - . ID=LTnewLM_240028500 LTnewLM_24 AUGUSTUS mRNA 802594 803574 1 - . ID=LTnewLM_240028500.1;Parent=LTnewLM_240028500 LTnewLM_24 AUGUSTUS CDS 802594 803574 1 - 0 ID=LTnewLM_240028500.1:CDS:1;Parent=LTnewLM_240028500.1 ### LTnewLM_24 . polypeptide 802594 803574 . - . ID=LTnewLM_240028500.1:pep;Derives_from=LTnewLM_240028500.1;orthologous_to=LmjF.24.2140_mRNA;ortholog_cluster=OG0002739;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_24 Pfam protein_match 803110 803265 . - . Parent=LTnewLM_240028500.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_24 AUGUSTUS gene 808407 808844 1 - . ID=LTnewLM_240028600 LTnewLM_24 AUGUSTUS mRNA 808407 808844 1 - . ID=LTnewLM_240028600.1;Parent=LTnewLM_240028600 LTnewLM_24 AUGUSTUS CDS 808407 808844 1 - 0 ID=LTnewLM_240028600.1:CDS:1;Parent=LTnewLM_240028600.1 ### LTnewLM_24 . polypeptide 808407 808844 . - . ID=LTnewLM_240028600.1:pep;Derives_from=LTnewLM_240028600.1;orthologous_to=LmjF.24.2150_mRNA;ortholog_cluster=OG0002740;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 812163 813167 1 - . ID=LTnewLM_240028700 LTnewLM_24 AUGUSTUS mRNA 812163 813167 1 - . ID=LTnewLM_240028700.1;Parent=LTnewLM_240028700 LTnewLM_24 AUGUSTUS CDS 812163 813167 1 - 0 ID=LTnewLM_240028700.1:CDS:1;Parent=LTnewLM_240028700.1 ### LTnewLM_24 . polypeptide 812163 813167 . - . ID=LTnewLM_240028700.1:pep;Derives_from=LTnewLM_240028700.1;orthologous_to=LmjF.24.2160_mRNA;ortholog_cluster=OG0002741;product=term%3DGlycerophosphoryl diester phosphodiesterase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03009;Ontology_term=GO:0008081,GO:0006629 LTnewLM_24 Pfam protein_match 812571 813050 . - . Parent=LTnewLM_240028700.1:pep;Name=PF03009;signature_desc=Glycerophosphoryl diester phosphodiesterase family;Ontology_term=GO:0008081,GO:0006629 ### LTnewLM_24 AUGUSTUS gene 814610 817660 1 - . ID=LTnewLM_240028800 LTnewLM_24 AUGUSTUS mRNA 814610 817660 1 - . ID=LTnewLM_240028800.1;Parent=LTnewLM_240028800 LTnewLM_24 AUGUSTUS CDS 814610 817660 1 - 0 ID=LTnewLM_240028800.1:CDS:1;Parent=LTnewLM_240028800.1 ### LTnewLM_24 . polypeptide 814610 817660 . - . ID=LTnewLM_240028800.1:pep;Derives_from=LTnewLM_240028800.1;orthologous_to=LmjF.24.2170_mRNA;ortholog_cluster=OG0002742;product=term%3DVacuolar-sorting protein 54%2C of GARP complex/Protein of unknown function C-terminus (DUF2451)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10475|Pfam:PF10474 LTnewLM_24 Pfam protein_match 814724 815341 . - . Parent=LTnewLM_240028800.1:pep;Name=PF10474;signature_desc=Protein of unknown function C-terminus (DUF2451) LTnewLM_24 Pfam protein_match 816926 817375 . - . Parent=LTnewLM_240028800.1:pep;Name=PF10475;signature_desc=Vacuolar-sorting protein 54%2C of GARP complex ### LTnewLM_24 AUGUSTUS gene 818388 822704 1 - . ID=LTnewLM_240028900 LTnewLM_24 AUGUSTUS mRNA 818388 822704 1 - . ID=LTnewLM_240028900.1;Parent=LTnewLM_240028900 LTnewLM_24 AUGUSTUS CDS 818388 822704 1 - 0 ID=LTnewLM_240028900.1:CDS:1;Parent=LTnewLM_240028900.1 ### LTnewLM_24 . polypeptide 818388 822704 . - . ID=LTnewLM_240028900.1:pep;Derives_from=LTnewLM_240028900.1;orthologous_to=LmjF.24.2180_mRNA;ortholog_cluster=OG0002743;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 823506 824249 1 - . ID=LTnewLM_240029000 LTnewLM_24 AUGUSTUS mRNA 823506 824249 1 - . ID=LTnewLM_240029000.1;Parent=LTnewLM_240029000 LTnewLM_24 AUGUSTUS CDS 823506 824249 1 - 0 ID=LTnewLM_240029000.1:CDS:1;Parent=LTnewLM_240029000.1 ### LTnewLM_24 . polypeptide 823506 824249 . - . ID=LTnewLM_240029000.1:pep;Derives_from=LTnewLM_240029000.1;orthologous_to=LmjF.24.2190_mRNA;ortholog_cluster=OG0002744;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 824931 825671 1 - . ID=LTnewLM_240029100 LTnewLM_24 AUGUSTUS mRNA 824931 825671 1 - . ID=LTnewLM_240029100.1;Parent=LTnewLM_240029100 LTnewLM_24 AUGUSTUS CDS 824931 825671 1 - 0 ID=LTnewLM_240029100.1:CDS:1;Parent=LTnewLM_240029100.1 ### LTnewLM_24 . polypeptide 824931 825671 . - . ID=LTnewLM_240029100.1:pep;Derives_from=LTnewLM_240029100.1;orthologous_to=LmjF.24.2200_mRNA;ortholog_cluster=OG0002745;product=term%3DPentatricopeptide repeat domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13812 LTnewLM_24 Pfam protein_match 825078 825182 . - . Parent=LTnewLM_240029100.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_24 Pfam protein_match 825390 825530 . - . Parent=LTnewLM_240029100.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain ### LTnewLM_24 AUGUSTUS gene 829021 829515 1 - . ID=LTnewLM_240029200 LTnewLM_24 AUGUSTUS mRNA 829021 829515 1 - . ID=LTnewLM_240029200.1;Parent=LTnewLM_240029200 LTnewLM_24 AUGUSTUS CDS 829021 829515 1 - 0 ID=LTnewLM_240029200.1:CDS:1;Parent=LTnewLM_240029200.1 ### LTnewLM_24 . polypeptide 829021 829515 . - . ID=LTnewLM_240029200.1:pep;Derives_from=LTnewLM_240029200.1;orthologous_to=LTnewLM_350027500.1,LmjF.24.2210_mRNA,LmjF.35.2190_mRNA;ortholog_cluster=OG0000177;product=term%3DRibosomal protein L11%2C N-terminal domain/Ribosomal protein L11%2C RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03946|Pfam:PF00298;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_24 Pfam protein_match 829090 829296 . - . Parent=LTnewLM_240029200.1:pep;Name=PF00298;signature_desc=Ribosomal protein L11%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_24 Pfam protein_match 829318 829473 . - . Parent=LTnewLM_240029200.1:pep;Name=PF03946;signature_desc=Ribosomal protein L11%2C N-terminal domain ### LTnewLM_24 AUGUSTUS gene 830251 831444 1 - . ID=LTnewLM_240029300 LTnewLM_24 AUGUSTUS mRNA 830251 831444 1 - . ID=LTnewLM_240029300.1;Parent=LTnewLM_240029300 LTnewLM_24 AUGUSTUS CDS 830251 831444 1 - 0 ID=LTnewLM_240029300.1:CDS:1;Parent=LTnewLM_240029300.1 ### LTnewLM_24 . polypeptide 830251 831444 . - . ID=LTnewLM_240029300.1:pep;Derives_from=LTnewLM_240029300.1;orthologous_to=LmjF.24.2220_mRNA;ortholog_cluster=OG0002746;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 833944 834471 1 - . ID=LTnewLM_240029400 LTnewLM_24 AUGUSTUS mRNA 833944 834471 1 - . ID=LTnewLM_240029400.1;Parent=LTnewLM_240029400 LTnewLM_24 AUGUSTUS CDS 833944 834471 1 - 0 ID=LTnewLM_240029400.1:CDS:1;Parent=LTnewLM_240029400.1 ### LTnewLM_24 . polypeptide 833944 834471 . - . ID=LTnewLM_240029400.1:pep;Derives_from=LTnewLM_240029400.1;orthologous_to=LmjF.24.2230_mRNA;ortholog_cluster=OG0002747;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 835320 836450 1 - . ID=LTnewLM_240029500 LTnewLM_24 AUGUSTUS mRNA 835320 836450 1 - . ID=LTnewLM_240029500.1;Parent=LTnewLM_240029500 LTnewLM_24 AUGUSTUS CDS 835320 836450 1 - 0 ID=LTnewLM_240029500.1:CDS:1;Parent=LTnewLM_240029500.1 ### LTnewLM_24 . polypeptide 835320 836450 . - . ID=LTnewLM_240029500.1:pep;Derives_from=LTnewLM_240029500.1;orthologous_to=LmjF.24.2240_mRNA;ortholog_cluster=OG0002748;product=term%3DFamily of unknown function (DUF5522)/Cobalamin adenosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17653|Pfam:PF01923 LTnewLM_24 Pfam protein_match 835359 835919 . - . Parent=LTnewLM_240029500.1:pep;Name=PF01923;signature_desc=Cobalamin adenosyltransferase LTnewLM_24 Pfam protein_match 836085 836222 . - . Parent=LTnewLM_240029500.1:pep;Name=PF17653;signature_desc=Family of unknown function (DUF5522) ### LTnewLM_24 AUGUSTUS gene 838778 840073 1 - . ID=LTnewLM_240029600 LTnewLM_24 AUGUSTUS mRNA 838778 840073 1 - . ID=LTnewLM_240029600.1;Parent=LTnewLM_240029600 LTnewLM_24 AUGUSTUS CDS 838778 840073 1 - 0 ID=LTnewLM_240029600.1:CDS:1;Parent=LTnewLM_240029600.1 ### LTnewLM_24 . polypeptide 838778 840073 . - . ID=LTnewLM_240029600.1:pep;Derives_from=LTnewLM_240029600.1;orthologous_to=LmjF.24.2250_mRNA;ortholog_cluster=OG0002749;product=term%3DFatty acid desaturase/Cytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487|Pfam:PF00173;Ontology_term=GO:0020037,GO:0006629 LTnewLM_24 Pfam protein_match 838799 838936 . - . Parent=LTnewLM_240029600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 LTnewLM_24 Pfam protein_match 839225 839908 . - . Parent=LTnewLM_240029600.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_24 AUGUSTUS gene 840648 842216 1 - . ID=LTnewLM_240029700 LTnewLM_24 AUGUSTUS mRNA 840648 842216 1 - . ID=LTnewLM_240029700.1;Parent=LTnewLM_240029700 LTnewLM_24 AUGUSTUS CDS 840648 842216 1 - 0 ID=LTnewLM_240029700.1:CDS:1;Parent=LTnewLM_240029700.1 ### LTnewLM_24 . polypeptide 840648 842216 . - . ID=LTnewLM_240029700.1:pep;Derives_from=LTnewLM_240029700.1;orthologous_to=LmjF.24.2260_mRNA;ortholog_cluster=OG0002750;product=term%3DNLE (NUC135) domain/WD domain%2C G-beta repeat/Anaphase-promoting complex subunit 4 WD40 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08154|Pfam:PF00400|Pfam:PF12894;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 840660 840755 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 840783 840893 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 840843 841013 . - . Parent=LTnewLM_240029700.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_24 Pfam protein_match 840909 841013 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 841278 841376 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 841398 841514 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 841560 841655 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 841674 841784 . - . Parent=LTnewLM_240029700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_24 Pfam protein_match 841947 842132 . - . Parent=LTnewLM_240029700.1:pep;Name=PF08154;signature_desc=NLE (NUC135) domain ### LTnewLM_24 AUGUSTUS gene 842879 843715 1 - . ID=LTnewLM_240029800 LTnewLM_24 AUGUSTUS mRNA 842879 843715 1 - . ID=LTnewLM_240029800.1;Parent=LTnewLM_240029800 LTnewLM_24 AUGUSTUS CDS 842879 843715 1 - 0 ID=LTnewLM_240029800.1:CDS:1;Parent=LTnewLM_240029800.1 ### LTnewLM_24 . polypeptide 842879 843715 . - . ID=LTnewLM_240029800.1:pep;Derives_from=LTnewLM_240029800.1;orthologous_to=LmjF.24.2270_mRNA;ortholog_cluster=OG0002751;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_24 Pfam protein_match 842942 843238 . - . Parent=LTnewLM_240029800.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_24 Liftoff gene 844637 847147 . - . ID=LTnewLM_240029900;coverage=1.0;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.2280_0 LTnewLM_24 Liftoff mRNA 844637 847147 . - . ID=LTnewLM_240029900.1;Parent=LTnewLM_240029900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 844637 847147 . - 0 ID=LTnewLM_240029900.1:CDS:1;Parent=LTnewLM_240029900.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 844637 847147 . - . ID=LTnewLM_240029900.1:pep;Derives_from=LTnewLM_240029900.1;orthologous_to=LmjF.24.2280_mRNA;ortholog_cluster=OG0002752;product=term%3DDEAD_2/Helical and beta-bridge domain/Helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06733|Pfam:PF06777|Pfam:PF13307;Ontology_term=GO:0006139,GO:0016818,GO:0008026,GO:0004003,GO:0005524,GO:0005634,GO:0003676,GO:0003677 LTnewLM_24 Pfam protein_match 844964 845482 . - . Parent=LTnewLM_240029900.1:pep;Name=PF13307;signature_desc=Helicase C-terminal domain;Ontology_term=GO:0003676,GO:0005524,GO:0008026,GO:0016818,GO:0006139 LTnewLM_24 Pfam protein_match 845864 846301 . - . Parent=LTnewLM_240029900.1:pep;Name=PF06777;signature_desc=Helical and beta-bridge domain;Ontology_term=GO:0005634 LTnewLM_24 Pfam protein_match 846350 846865 . - . Parent=LTnewLM_240029900.1:pep;Name=PF06733;signature_desc=DEAD_2;Ontology_term=GO:0003677,GO:0004003,GO:0005524 ### LTnewLM_24 AUGUSTUS gene 847790 850024 1 - . ID=LTnewLM_240030000 LTnewLM_24 AUGUSTUS mRNA 847790 850024 1 - . ID=LTnewLM_240030000.1;Parent=LTnewLM_240030000 LTnewLM_24 AUGUSTUS CDS 847790 850024 1 - 0 ID=LTnewLM_240030000.1:CDS:1;Parent=LTnewLM_240030000.1 ### LTnewLM_24 . polypeptide 847790 850024 . - . ID=LTnewLM_240030000.1:pep;Derives_from=LTnewLM_240030000.1;orthologous_to=LmjF.24.2290_mRNA;ortholog_cluster=OG0002753;product=term%3DCullin family/Cullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888|Pfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_24 Pfam protein_match 847823 848005 . - . Parent=LTnewLM_240030000.1:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 LTnewLM_24 Pfam protein_match 848099 849916 . - . Parent=LTnewLM_240030000.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_24 AUGUSTUS gene 850781 851491 1 - . ID=LTnewLM_240030100 LTnewLM_24 AUGUSTUS mRNA 850781 851491 1 - . ID=LTnewLM_240030100.1;Parent=LTnewLM_240030100 LTnewLM_24 AUGUSTUS CDS 850781 851491 1 - 0 ID=LTnewLM_240030100.1:CDS:1;Parent=LTnewLM_240030100.1 ### LTnewLM_24 . polypeptide 850781 851491 . - . ID=LTnewLM_240030100.1:pep;Derives_from=LTnewLM_240030100.1;orthologous_to=LmjF.24.2300_mRNA;ortholog_cluster=OG0002754;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 851903 852394 1 - . ID=LTnewLM_240030200 LTnewLM_24 AUGUSTUS mRNA 851903 852394 1 - . ID=LTnewLM_240030200.1;Parent=LTnewLM_240030200 LTnewLM_24 AUGUSTUS CDS 851903 852394 1 - 0 ID=LTnewLM_240030200.1:CDS:1;Parent=LTnewLM_240030200.1 ### LTnewLM_24 . polypeptide 851903 852394 . - . ID=LTnewLM_240030200.1:pep;Derives_from=LTnewLM_240030200.1;orthologous_to=LmjF.24.2310_mRNA;ortholog_cluster=OG0002755;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 AUGUSTUS gene 853096 854148 1 - . ID=LTnewLM_240030300 LTnewLM_24 AUGUSTUS mRNA 853096 854148 1 - . ID=LTnewLM_240030300.1;Parent=LTnewLM_240030300 LTnewLM_24 AUGUSTUS CDS 853096 854148 1 - 0 ID=LTnewLM_240030300.1:CDS:1;Parent=LTnewLM_240030300.1 ### LTnewLM_24 . polypeptide 853096 854148 . - . ID=LTnewLM_240030300.1:pep;Derives_from=LTnewLM_240030300.1;orthologous_to=LmjF.24.2320_mRNA;ortholog_cluster=OG0002756;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 853162 853923 . - . Parent=LTnewLM_240030300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_24 Pfam protein_match 853174 853932 . - . Parent=LTnewLM_240030300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_24 Liftoff gene 854988 855764 . - . ID=LTnewLM_240030400;coverage=0.998;sequence_ID=0.903;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.24.2330_0 LTnewLM_24 Liftoff mRNA 854988 855764 . - . ID=LTnewLM_240030400.1;Parent=LTnewLM_240030400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 854988 855764 . - 0 ID=LTnewLM_240030400.1:CDS:1;Parent=LTnewLM_240030400.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 854988 855764 . - . ID=LTnewLM_240030400.1:pep;Derives_from=LTnewLM_240030400.1;orthologous_to=LmjF.24.2330_mRNA;ortholog_cluster=OG0002757;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_24 Liftoff gene 857006 858421 . + . ID=LTnewLM_240030500;coverage=1.0;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.24.2340_0 LTnewLM_24 Liftoff mRNA 857006 858421 . + . ID=LTnewLM_240030500.1;Parent=LTnewLM_240030500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_24 Liftoff CDS 857006 858421 . + 0 ID=LTnewLM_240030500.1:CDS:1;Parent=LTnewLM_240030500.1;extra_copy_number=0 ### LTnewLM_24 . polypeptide 857006 858421 . + . ID=LTnewLM_240030500.1:pep;Derives_from=LTnewLM_240030500.1;orthologous_to=LmjF.24.2340_mRNA;ortholog_cluster=OG0002758;product=term%3DSpoU rRNA Methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00588;Ontology_term=GO:0003723,GO:0008173,GO:0006396 LTnewLM_24 Pfam protein_match 857120 857545 . + . Parent=LTnewLM_240030500.1:pep;Name=PF00588;signature_desc=SpoU rRNA Methylase family;Ontology_term=GO:0003723,GO:0008173,GO:0006396 ### LTnewLM_25 AUGUSTUS gene 1 1084 0.89 + . ID=LTnewLM_250005000;fiveEndPartial=true;Start_range=.,. LTnewLM_25 AUGUSTUS mRNA 1 1084 0.89 + . ID=LTnewLM_250005000.1;Parent=LTnewLM_250005000 LTnewLM_25 AUGUSTUS CDS 780 1084 0.89 + 2 ID=LTnewLM_250005000.1:CDS:1;Parent=LTnewLM_250005000.1 ### LTnewLM_25 . contig 1 900343 . + . Name=LTnewLM_CTG000025 LTnewLM_25 . polypeptide 780 1084 . + . ID=LTnewLM_250005000.1:pep;Derives_from=LTnewLM_250005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 3213 4517 1 - . ID=LTnewLM_250005100 LTnewLM_25 AUGUSTUS mRNA 3213 4517 1 - . ID=LTnewLM_250005100.1;Parent=LTnewLM_250005100 LTnewLM_25 AUGUSTUS CDS 3213 4517 1 - 0 ID=LTnewLM_250005100.1:CDS:1;Parent=LTnewLM_250005100.1 ### LTnewLM_25 . polypeptide 3213 4517 . - . ID=LTnewLM_250005100.1:pep;Derives_from=LTnewLM_250005100.1;orthologous_to=LmjF.25.0010_mRNA;ortholog_cluster=OG0002759;product=term%3DGlycosyl transferase family 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00535 LTnewLM_25 Pfam protein_match 3933 4133 . - . Parent=LTnewLM_250005100.1:pep;Name=PF00535;signature_desc=Glycosyl transferase family 2 ### LTnewLM_25 AUGUSTUS gene 5179 5862 1 - . ID=LTnewLM_250005200 LTnewLM_25 AUGUSTUS mRNA 5179 5862 1 - . ID=LTnewLM_250005200.1;Parent=LTnewLM_250005200 LTnewLM_25 AUGUSTUS CDS 5179 5862 1 - 0 ID=LTnewLM_250005200.1:CDS:1;Parent=LTnewLM_250005200.1 ### LTnewLM_25 . polypeptide 5179 5862 . - . ID=LTnewLM_250005200.1:pep;Derives_from=LTnewLM_250005200.1;orthologous_to=LmjF.25.0020_mRNA;ortholog_cluster=OG0002760;product=term%3DAcetyltransferase (GNAT) domain/Acetyltransferase (GNAT) family/FR47-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13673|Pfam:PF00583|Pfam:PF08445;Ontology_term=GO:0016747,GO:0008080 LTnewLM_25 Pfam protein_match 5347 5538 . - . Parent=LTnewLM_250005200.1:pep;Name=PF08445;signature_desc=FR47-like protein;Ontology_term=GO:0016747 LTnewLM_25 Pfam protein_match 5353 5655 . - . Parent=LTnewLM_250005200.1:pep;Name=PF13673;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_25 Pfam protein_match 5359 5604 . - . Parent=LTnewLM_250005200.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_25 . pseudogene 6082 7834 . - . ID=LTnewLM_250005300:pseudogene;coverage=1.0;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0030_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 6082 7834 . - . ID=LTnewLM_250005300.1;Parent=LTnewLM_250005300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 6082 7834 . - . ID=LTnewLM_250005300.1:pseudogenic_exon:1;Parent=LTnewLM_250005300.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 6082 7834 . - . ID=LTnewLM_250005300.1:pep;Derives_from=LTnewLM_250005300.1;orthologous_to=LmjF.25.0030_mRNA;ortholog_cluster=OG0007533;product=term%3DrRNA (uridine-N3-)-methyltransferase BTM5-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10354 LTnewLM_25 Pfam protein_match 7193 7756 . - . Parent=LTnewLM_250005300.1:pep;Name=PF10354;signature_desc=rRNA (uridine-N3-)-methyltransferase BTM5-like ### LTnewLM_25 AUGUSTUS gene 8601 12404 1 - . ID=LTnewLM_250005400 LTnewLM_25 AUGUSTUS mRNA 8601 12404 1 - . ID=LTnewLM_250005400.1;Parent=LTnewLM_250005400 LTnewLM_25 AUGUSTUS CDS 8601 12404 1 - 0 ID=LTnewLM_250005400.1:CDS:1;Parent=LTnewLM_250005400.1 ### LTnewLM_25 . polypeptide 8601 12404 . - . ID=LTnewLM_250005400.1:pep;Derives_from=LTnewLM_250005400.1;orthologous_to=LmjF.25.0040_mRNA;ortholog_cluster=OG0002761;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 13106 13621 1 - . ID=LTnewLM_250005500 LTnewLM_25 AUGUSTUS mRNA 13106 13621 1 - . ID=LTnewLM_250005500.1;Parent=LTnewLM_250005500 LTnewLM_25 AUGUSTUS CDS 13106 13621 1 - 0 ID=LTnewLM_250005500.1:CDS:1;Parent=LTnewLM_250005500.1 ### LTnewLM_25 . polypeptide 13106 13621 . - . ID=LTnewLM_250005500.1:pep;Derives_from=LTnewLM_250005500.1;orthologous_to=LmjF.25.0050_mRNA;ortholog_cluster=OG0002762;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 14234 14692 . - . ID=LTnewLM_250005600.1:pep;Derives_from=LTnewLM_250005600.1;orthologous_to=LmjF.25.0060.2_mRNA;ortholog_cluster=OG0007534;product=term%3DGot1/Sft2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04178;Ontology_term=GO:0016192 LTnewLM_25 Pfam protein_match 14279 14602 . - . Parent=LTnewLM_250005600.1:pep;Name=PF04178;signature_desc=Got1/Sft2-like family;Ontology_term=GO:0016192 ### LTnewLM_25 . polypeptide 14234 15109 . - . ID=LTnewLM_250005600.2:pep;Derives_from=LTnewLM_250005600.2;orthologous_to=LmjF.25.0060.1_mRNA;ortholog_cluster=OG0007535;product=term%3DGot1/Sft2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04178;Ontology_term=GO:0016192 LTnewLM_25 Pfam protein_match 14279 14602 . - . Parent=LTnewLM_250005600.2:pep;Name=PF04178;signature_desc=Got1/Sft2-like family;Ontology_term=GO:0016192 ### LTnewLM_25 . pseudogene 14234 15928 . - . ID=LTnewLM_250005600:pseudogene;coverage=0.986;sequence_ID=0.889;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.0060_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 14234 14860 . - . ID=LTnewLM_250005600.1;Parent=LTnewLM_250005600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 14234 14692 . - . ID=LTnewLM_250005600.1:pseudogenic_exon:1;Parent=LTnewLM_250005600.1;extra_copy_number=0 LTnewLM_25 . pseudogenic_transcript 14234 15928 . - . ID=LTnewLM_250005600.2;Parent=LTnewLM_250005600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 14234 15109 . - . ID=LTnewLM_250005600.2:pseudogenic_exon:1;Parent=LTnewLM_250005600.2;extra_copy_number=0 ### LTnewLM_25 AUGUSTUS gene 16570 17463 1 - . ID=LTnewLM_250005700 LTnewLM_25 AUGUSTUS mRNA 16570 17463 1 - . ID=LTnewLM_250005700.1;Parent=LTnewLM_250005700 LTnewLM_25 AUGUSTUS CDS 16570 17463 1 - 0 ID=LTnewLM_250005700.1:CDS:1;Parent=LTnewLM_250005700.1 ### LTnewLM_25 . polypeptide 16570 17463 . - . ID=LTnewLM_250005700.1:pep;Derives_from=LTnewLM_250005700.1;orthologous_to=LmjF.25.0070_mRNA;ortholog_cluster=OG0002763;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 19126 20760 1 - . ID=LTnewLM_250005800 LTnewLM_25 AUGUSTUS mRNA 19126 20760 1 - . ID=LTnewLM_250005800.1;Parent=LTnewLM_250005800 LTnewLM_25 AUGUSTUS CDS 19126 20760 1 - 0 ID=LTnewLM_250005800.1:CDS:1;Parent=LTnewLM_250005800.1 ### LTnewLM_25 . polypeptide 19126 20760 . - . ID=LTnewLM_250005800.1:pep;Derives_from=LTnewLM_250005800.1;orthologous_to=LmjF.25.0080_mRNA;ortholog_cluster=OG0002764;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)/Poly-adenylate binding protein%2C unique domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076|Pfam:PF00658;Ontology_term=GO:0003676,GO:0003723 LTnewLM_25 Pfam protein_match 19150 19341 . - . Parent=LTnewLM_250005800.1:pep;Name=PF00658;signature_desc=Poly-adenylate binding protein%2C unique domain;Ontology_term=GO:0003723 LTnewLM_25 Pfam protein_match 19696 19890 . - . Parent=LTnewLM_250005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 20011 20193 . - . Parent=LTnewLM_250005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 20260 20460 . - . Parent=LTnewLM_250005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 20542 20733 . - . Parent=LTnewLM_250005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_25 AUGUSTUS gene 21937 22197 1 - . ID=LTnewLM_250005900 LTnewLM_25 AUGUSTUS mRNA 21937 22197 1 - . ID=LTnewLM_250005900.1;Parent=LTnewLM_250005900 LTnewLM_25 AUGUSTUS CDS 21937 22197 1 - 0 ID=LTnewLM_250005900.1:CDS:1;Parent=LTnewLM_250005900.1 ### LTnewLM_25 . polypeptide 21937 22197 . - . ID=LTnewLM_250005900.1:pep;Derives_from=LTnewLM_250005900.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 23152 23514 1 - . ID=LTnewLM_250006000 LTnewLM_25 AUGUSTUS mRNA 23152 23514 1 - . ID=LTnewLM_250006000.1;Parent=LTnewLM_250006000 LTnewLM_25 AUGUSTUS CDS 23152 23514 1 - 0 ID=LTnewLM_250006000.1:CDS:1;Parent=LTnewLM_250006000.1 ### LTnewLM_25 . polypeptide 23152 23514 . - . ID=LTnewLM_250006000.1:pep;Derives_from=LTnewLM_250006000.1;orthologous_to=LmjF.25.0090_mRNA;ortholog_cluster=OG0002765;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 26451 26666 1 - . ID=LTnewLM_250006100 LTnewLM_25 AUGUSTUS mRNA 26451 26666 1 - . ID=LTnewLM_250006100.1;Parent=LTnewLM_250006100 LTnewLM_25 AUGUSTUS CDS 26451 26666 1 - 0 ID=LTnewLM_250006100.1:CDS:1;Parent=LTnewLM_250006100.1 ### LTnewLM_25 . polypeptide 26451 26666 . - . ID=LTnewLM_250006100.1:pep;Derives_from=LTnewLM_250006100.1;orthologous_to=LmjF.25.0100_mRNA;ortholog_cluster=OG0002766;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 27327 28751 1 - . ID=LTnewLM_250006200 LTnewLM_25 AUGUSTUS mRNA 27327 28751 1 - . ID=LTnewLM_250006200.1;Parent=LTnewLM_250006200 LTnewLM_25 AUGUSTUS CDS 27327 28751 1 - 0 ID=LTnewLM_250006200.1:CDS:1;Parent=LTnewLM_250006200.1 ### LTnewLM_25 . polypeptide 27327 28751 . - . ID=LTnewLM_250006200.1:pep;Derives_from=LTnewLM_250006200.1;orthologous_to=LmjF.25.0110_mRNA;ortholog_cluster=OG0002767;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 31499 32275 1 - . ID=LTnewLM_250006300 LTnewLM_25 AUGUSTUS mRNA 31499 32275 1 - . ID=LTnewLM_250006300.1;Parent=LTnewLM_250006300 LTnewLM_25 AUGUSTUS CDS 31499 32275 1 - 0 ID=LTnewLM_250006300.1:CDS:1;Parent=LTnewLM_250006300.1 ### LTnewLM_25 . polypeptide 31499 32275 . - . ID=LTnewLM_250006300.1:pep;Derives_from=LTnewLM_250006300.1;orthologous_to=LmjF.25.0120_mRNA;ortholog_cluster=OG0002768;product=term%3DElectron transfer flavoprotein domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01012 LTnewLM_25 Pfam protein_match 31631 32182 . - . Parent=LTnewLM_250006300.1:pep;Name=PF01012;signature_desc=Electron transfer flavoprotein domain ### LTnewLM_25 AUGUSTUS gene 33619 35523 1 - . ID=LTnewLM_250006400 LTnewLM_25 AUGUSTUS mRNA 33619 35523 1 - . ID=LTnewLM_250006400.1;Parent=LTnewLM_250006400 LTnewLM_25 AUGUSTUS CDS 33619 35523 1 - 0 ID=LTnewLM_250006400.1:CDS:1;Parent=LTnewLM_250006400.1 ### LTnewLM_25 . polypeptide 33619 35523 . - . ID=LTnewLM_250006400.1:pep;Derives_from=LTnewLM_250006400.1;orthologous_to=LmjF.25.0130_mRNA;ortholog_cluster=OG0002769;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_25 Pfam protein_match 34021 34260 . - . Parent=LTnewLM_250006400.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_25 Pfam protein_match 34888 35454 . - . Parent=LTnewLM_250006400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_25 Pfam protein_match 35083 35442 . - . Parent=LTnewLM_250006400.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_25 AUGUSTUS gene 36505 36894 1 - . ID=LTnewLM_250006500 LTnewLM_25 AUGUSTUS mRNA 36505 36894 1 - . ID=LTnewLM_250006500.1;Parent=LTnewLM_250006500 LTnewLM_25 AUGUSTUS CDS 36505 36894 1 - 0 ID=LTnewLM_250006500.1:CDS:1;Parent=LTnewLM_250006500.1 ### LTnewLM_25 . polypeptide 36505 36894 . - . ID=LTnewLM_250006500.1:pep;Derives_from=LTnewLM_250006500.1;orthologous_to=LmjF.25.0140_mRNA;ortholog_cluster=OG0002770;product=term%3DRNA polymerase Rpb6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01192;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_25 Pfam protein_match 36607 36798 . - . Parent=LTnewLM_250006500.1:pep;Name=PF01192;signature_desc=RNA polymerase Rpb6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_25 AUGUSTUS gene 37662 39803 1 - . ID=LTnewLM_250006600 LTnewLM_25 AUGUSTUS mRNA 37662 39803 1 - . ID=LTnewLM_250006600.1;Parent=LTnewLM_250006600 LTnewLM_25 AUGUSTUS CDS 37662 39803 1 - 0 ID=LTnewLM_250006600.1:CDS:1;Parent=LTnewLM_250006600.1 ### LTnewLM_25 . polypeptide 37662 39803 . - . ID=LTnewLM_250006600.1:pep;Derives_from=LTnewLM_250006600.1;orthologous_to=LmjF.25.0150_mRNA;ortholog_cluster=OG0002771;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 40547 41194 1 - . ID=LTnewLM_250006700 LTnewLM_25 AUGUSTUS mRNA 40547 41194 1 - . ID=LTnewLM_250006700.1;Parent=LTnewLM_250006700 LTnewLM_25 AUGUSTUS CDS 40547 41194 1 - 0 ID=LTnewLM_250006700.1:CDS:1;Parent=LTnewLM_250006700.1 ### LTnewLM_25 . polypeptide 40547 41194 . - . ID=LTnewLM_250006700.1:pep;Derives_from=LTnewLM_250006700.1;orthologous_to=LmjF.25.0160_mRNA;ortholog_cluster=OG0002772;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 42467 44923 1 - . ID=LTnewLM_250006800 LTnewLM_25 AUGUSTUS mRNA 42467 44923 1 - . ID=LTnewLM_250006800.1;Parent=LTnewLM_250006800 LTnewLM_25 AUGUSTUS CDS 42467 44923 1 - 0 ID=LTnewLM_250006800.1:CDS:1;Parent=LTnewLM_250006800.1 ### LTnewLM_25 . polypeptide 42467 44923 . - . ID=LTnewLM_250006800.1:pep;Derives_from=LTnewLM_250006800.1;orthologous_to=LmjF.25.0170_mRNA;ortholog_cluster=OG0002773;product=term%3DMetallo-beta-lactamase superfamily domain/Cleavage and polyadenylation factor 2 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16661|Pfam:PF13299 LTnewLM_25 Pfam protein_match 42485 42946 . - . Parent=LTnewLM_250006800.1:pep;Name=PF13299;signature_desc=Cleavage and polyadenylation factor 2 C-terminal LTnewLM_25 Pfam protein_match 44360 44845 . - . Parent=LTnewLM_250006800.1:pep;Name=PF16661;signature_desc=Metallo-beta-lactamase superfamily domain ### LTnewLM_25 AUGUSTUS gene 45899 49048 1 - . ID=LTnewLM_250006900 LTnewLM_25 AUGUSTUS mRNA 45899 49048 1 - . ID=LTnewLM_250006900.1;Parent=LTnewLM_250006900 LTnewLM_25 AUGUSTUS CDS 45899 49048 1 - 0 ID=LTnewLM_250006900.1:CDS:1;Parent=LTnewLM_250006900.1 ### LTnewLM_25 . polypeptide 45899 49048 . - . ID=LTnewLM_250006900.1:pep;Derives_from=LTnewLM_250006900.1;orthologous_to=LmjF.25.0180_mRNA;ortholog_cluster=OG0002774;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 50874 51577 0.94 - . ID=LTnewLM_250007000 LTnewLM_25 AUGUSTUS mRNA 50874 51577 0.94 - . ID=LTnewLM_250007000.1;Parent=LTnewLM_250007000 LTnewLM_25 AUGUSTUS CDS 50874 51311 0.94 - 0 ID=LTnewLM_250007000.1:CDS:1;Parent=LTnewLM_250007000.1 LTnewLM_25 AUGUSTUS CDS 51359 51577 0.94 - 0 ID=LTnewLM_250007000.1:CDS:2;Parent=LTnewLM_250007000.1 ### LTnewLM_25 . polypeptide 50874 51577 . - . ID=LTnewLM_250007000.1:pep;Derives_from=LTnewLM_250007000.1;orthologous_to=LmjF.25.0190_mRNA;ortholog_cluster=OG0002775;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C family 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01088;Ontology_term=GO:0004843,GO:0005622,GO:0006511 LTnewLM_25 Pfam protein_match 50978 51574 . - . Parent=LTnewLM_250007000.1:pep;Name=PF01088;signature_desc=Ubiquitin carboxyl-terminal hydrolase%2C family 1;Ontology_term=GO:0004843,GO:0006511,GO:0005622 ### LTnewLM_25 AUGUSTUS gene 52707 56837 1 - . ID=LTnewLM_250007100 LTnewLM_25 AUGUSTUS mRNA 52707 56837 1 - . ID=LTnewLM_250007100.1;Parent=LTnewLM_250007100 LTnewLM_25 AUGUSTUS CDS 52707 56837 1 - 0 ID=LTnewLM_250007100.1:CDS:1;Parent=LTnewLM_250007100.1 ### LTnewLM_25 . polypeptide 52707 56837 . - . ID=LTnewLM_250007100.1:pep;Derives_from=LTnewLM_250007100.1;orthologous_to=LmjF.25.0200_mRNA;ortholog_cluster=OG0002776;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15911 LTnewLM_25 Pfam protein_match 55113 55280 . - . Parent=LTnewLM_250007100.1:pep;Name=PF15911;signature_desc=WD domain%2C G-beta repeat ### LTnewLM_25 AUGUSTUS gene 59116 60027 1 - . ID=LTnewLM_250007200 LTnewLM_25 AUGUSTUS mRNA 59116 60027 1 - . ID=LTnewLM_250007200.1;Parent=LTnewLM_250007200 LTnewLM_25 AUGUSTUS CDS 59116 60027 1 - 0 ID=LTnewLM_250007200.1:CDS:1;Parent=LTnewLM_250007200.1 ### LTnewLM_25 . polypeptide 59116 60027 . - . ID=LTnewLM_250007200.1:pep;Derives_from=LTnewLM_250007200.1;orthologous_to=LmjF.25.0210_mRNA;ortholog_cluster=OG0002777;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_25 Pfam protein_match 59158 59418 . - . Parent=LTnewLM_250007200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_25 Pfam protein_match 59449 59721 . - . Parent=LTnewLM_250007200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_25 Pfam protein_match 59758 60009 . - . Parent=LTnewLM_250007200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_25 AUGUSTUS gene 62222 64363 1 - . ID=LTnewLM_250007300 LTnewLM_25 AUGUSTUS mRNA 62222 64363 1 - . ID=LTnewLM_250007300.1;Parent=LTnewLM_250007300 LTnewLM_25 AUGUSTUS CDS 62222 64363 1 - 0 ID=LTnewLM_250007300.1:CDS:1;Parent=LTnewLM_250007300.1 ### LTnewLM_25 . polypeptide 62222 64363 . - . ID=LTnewLM_250007300.1:pep;Derives_from=LTnewLM_250007300.1;orthologous_to=LmjF.25.0220_mRNA;ortholog_cluster=OG0002778;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 65800 66786 1 - . ID=LTnewLM_250007400 LTnewLM_25 AUGUSTUS mRNA 65800 66786 1 - . ID=LTnewLM_250007400.1;Parent=LTnewLM_250007400 LTnewLM_25 AUGUSTUS CDS 65800 66786 1 - 0 ID=LTnewLM_250007400.1:CDS:1;Parent=LTnewLM_250007400.1 ### LTnewLM_25 . polypeptide 65800 66786 . - . ID=LTnewLM_250007400.1:pep;Derives_from=LTnewLM_250007400.1;orthologous_to=LmjF.25.0230_mRNA;ortholog_cluster=OG0002779;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_25 Pfam protein_match 65950 66255 . - . Parent=LTnewLM_250007400.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_25 AUGUSTUS gene 67602 68162 1 - . ID=LTnewLM_250007500 LTnewLM_25 AUGUSTUS mRNA 67602 68162 1 - . ID=LTnewLM_250007500.1;Parent=LTnewLM_250007500 LTnewLM_25 AUGUSTUS CDS 67602 68162 1 - 0 ID=LTnewLM_250007500.1:CDS:1;Parent=LTnewLM_250007500.1 ### LTnewLM_25 . polypeptide 67602 68162 . - . ID=LTnewLM_250007500.1:pep;Derives_from=LTnewLM_250007500.1;orthologous_to=LmjF.25.0240_mRNA;ortholog_cluster=OG0002780;product=term%3DPre-mRNA-splicing factor of RES complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09736 LTnewLM_25 Pfam protein_match 67617 67691 . - . Parent=LTnewLM_250007500.1:pep;Name=PF09736;signature_desc=Pre-mRNA-splicing factor of RES complex ### LTnewLM_25 AUGUSTUS gene 68816 71449 1 - . ID=LTnewLM_250007600 LTnewLM_25 AUGUSTUS mRNA 68816 71449 1 - . ID=LTnewLM_250007600.1;Parent=LTnewLM_250007600 LTnewLM_25 AUGUSTUS CDS 68816 71449 1 - 0 ID=LTnewLM_250007600.1:CDS:1;Parent=LTnewLM_250007600.1 ### LTnewLM_25 . polypeptide 68816 71449 . - . ID=LTnewLM_250007600.1:pep;Derives_from=LTnewLM_250007600.1;orthologous_to=LmjF.25.0250_mRNA;ortholog_cluster=OG0002781;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 72319 72588 1 - . ID=LTnewLM_250007700 LTnewLM_25 AUGUSTUS mRNA 72319 72588 1 - . ID=LTnewLM_250007700.1;Parent=LTnewLM_250007700 LTnewLM_25 AUGUSTUS CDS 72319 72588 1 - 0 ID=LTnewLM_250007700.1:CDS:1;Parent=LTnewLM_250007700.1 ### LTnewLM_25 . polypeptide 72319 72588 . - . ID=LTnewLM_250007700.1:pep;Derives_from=LTnewLM_250007700.1;orthologous_to=LmjF.25.0260_mRNA;ortholog_cluster=OG0002782;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_25 Pfam protein_match 72328 72576 . - . Parent=LTnewLM_250007700.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_25 AUGUSTUS gene 73615 77085 1 - . ID=LTnewLM_250007800 LTnewLM_25 AUGUSTUS mRNA 73615 77085 1 - . ID=LTnewLM_250007800.1;Parent=LTnewLM_250007800 LTnewLM_25 AUGUSTUS CDS 73615 77085 1 - 0 ID=LTnewLM_250007800.1:CDS:1;Parent=LTnewLM_250007800.1 ### LTnewLM_25 . polypeptide 73615 77085 . - . ID=LTnewLM_250007800.1:pep;Derives_from=LTnewLM_250007800.1;orthologous_to=LmjF.25.0270_mRNA;ortholog_cluster=OG0002783;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 78409 80484 1 - . ID=LTnewLM_250007900 LTnewLM_25 AUGUSTUS mRNA 78409 80484 1 - . ID=LTnewLM_250007900.1;Parent=LTnewLM_250007900 LTnewLM_25 AUGUSTUS CDS 78409 80484 1 - 0 ID=LTnewLM_250007900.1:CDS:1;Parent=LTnewLM_250007900.1 ### LTnewLM_25 . polypeptide 78409 80484 . - . ID=LTnewLM_250007900.1:pep;Derives_from=LTnewLM_250007900.1;orthologous_to=LmjF.25.0280_mRNA;ortholog_cluster=OG0002784;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 84014 85768 1 - . ID=LTnewLM_250008000 LTnewLM_25 AUGUSTUS mRNA 84014 85768 1 - . ID=LTnewLM_250008000.1;Parent=LTnewLM_250008000 LTnewLM_25 AUGUSTUS CDS 84014 85768 1 - 0 ID=LTnewLM_250008000.1:CDS:1;Parent=LTnewLM_250008000.1 ### LTnewLM_25 . polypeptide 84014 85768 . - . ID=LTnewLM_250008000.1:pep;Derives_from=LTnewLM_250008000.1;orthologous_to=LmjF.25.0290_mRNA;ortholog_cluster=OG0002785;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 87385 89232 1 - . ID=LTnewLM_250008100 LTnewLM_25 AUGUSTUS mRNA 87385 89232 1 - . ID=LTnewLM_250008100.1;Parent=LTnewLM_250008100 LTnewLM_25 AUGUSTUS CDS 87385 89232 1 - 0 ID=LTnewLM_250008100.1:CDS:1;Parent=LTnewLM_250008100.1 ### LTnewLM_25 . polypeptide 87385 89232 . - . ID=LTnewLM_250008100.1:pep;Derives_from=LTnewLM_250008100.1;orthologous_to=LmjF.25.0300_mRNA;ortholog_cluster=OG0002786;product=term%3DDiphthamide synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01902 LTnewLM_25 Pfam protein_match 88498 89073 . - . Parent=LTnewLM_250008100.1:pep;Name=PF01902;signature_desc=Diphthamide synthase ### LTnewLM_25 AUGUSTUS gene 90008 90280 1 - . ID=LTnewLM_250008200 LTnewLM_25 AUGUSTUS mRNA 90008 90280 1 - . ID=LTnewLM_250008200.1;Parent=LTnewLM_250008200 LTnewLM_25 AUGUSTUS CDS 90008 90280 1 - 0 ID=LTnewLM_250008200.1:CDS:1;Parent=LTnewLM_250008200.1 ### LTnewLM_25 . polypeptide 90008 90280 . - . ID=LTnewLM_250008200.1:pep;Derives_from=LTnewLM_250008200.1;orthologous_to=LmjF.25.0305_mRNA;ortholog_cluster=OG0002787;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 90947 94195 1 - . ID=LTnewLM_250008300 LTnewLM_25 AUGUSTUS mRNA 90947 94195 1 - . ID=LTnewLM_250008300.1;Parent=LTnewLM_250008300 LTnewLM_25 AUGUSTUS CDS 90947 94195 1 - 0 ID=LTnewLM_250008300.1:CDS:1;Parent=LTnewLM_250008300.1 ### LTnewLM_25 . polypeptide 90947 94195 . - . ID=LTnewLM_250008300.1:pep;Derives_from=LTnewLM_250008300.1;orthologous_to=LmjF.25.0310_mRNA;ortholog_cluster=OG0002788;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 94853 95404 1 - . ID=LTnewLM_250008400 LTnewLM_25 AUGUSTUS mRNA 94853 95404 1 - . ID=LTnewLM_250008400.1;Parent=LTnewLM_250008400 LTnewLM_25 AUGUSTUS CDS 94853 95404 1 - 0 ID=LTnewLM_250008400.1:CDS:1;Parent=LTnewLM_250008400.1 ### LTnewLM_25 . polypeptide 94853 95404 . - . ID=LTnewLM_250008400.1:pep;Derives_from=LTnewLM_250008400.1;orthologous_to=LmjF.25.0320_mRNA;ortholog_cluster=OG0002789;product=term%3DCiliary basal body-associated%2C B9 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07162 LTnewLM_25 Pfam protein_match 94895 95395 . - . Parent=LTnewLM_250008400.1:pep;Name=PF07162;signature_desc=Ciliary basal body-associated%2C B9 protein ### LTnewLM_25 AUGUSTUS gene 96592 98649 1 - . ID=LTnewLM_250008500 LTnewLM_25 AUGUSTUS mRNA 96592 98649 1 - . ID=LTnewLM_250008500.1;Parent=LTnewLM_250008500 LTnewLM_25 AUGUSTUS CDS 96592 98649 1 - 0 ID=LTnewLM_250008500.1:CDS:1;Parent=LTnewLM_250008500.1 ### LTnewLM_25 . polypeptide 96592 98649 . - . ID=LTnewLM_250008500.1:pep;Derives_from=LTnewLM_250008500.1;orthologous_to=LmjF.25.0330_mRNA;ortholog_cluster=OG0002790;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 101522 101985 0.98 - . ID=LTnewLM_250008600 LTnewLM_25 AUGUSTUS mRNA 101522 101985 0.33 - . ID=LTnewLM_250008600.1;Parent=LTnewLM_250008600 LTnewLM_25 AUGUSTUS CDS 101522 101528 0.62 - 1 ID=LTnewLM_250008600.1:CDS:1;Parent=LTnewLM_250008600.1 LTnewLM_25 AUGUSTUS CDS 101708 101985 0.38 - 0 ID=LTnewLM_250008600.1:CDS:2;Parent=LTnewLM_250008600.1 LTnewLM_25 AUGUSTUS mRNA 101629 101985 0.65 - . ID=LTnewLM_250008600.2;Parent=LTnewLM_250008600 LTnewLM_25 AUGUSTUS CDS 101629 101985 0.65 - 0 ID=LTnewLM_250008600.2:CDS:1;Parent=LTnewLM_250008600.2 ### LTnewLM_25 . polypeptide 101522 101985 . - . ID=LTnewLM_250008600.1:pep;Derives_from=LTnewLM_250008600.1;orthologous_to=LTnewLM_250008600.2;ortholog_cluster=OG0002791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 101629 101985 . - . ID=LTnewLM_250008600.2:pep;Derives_from=LTnewLM_250008600.2;orthologous_to=LTnewLM_250008600.1;ortholog_cluster=OG0002791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 103698 105688 . - . ID=LTnewLM_250008700:pseudogene;coverage=1.0;sequence_ID=0.897;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0340_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 103698 105688 . - . ID=LTnewLM_250008700.1;Parent=LTnewLM_250008700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 103698 105688 . - . ID=LTnewLM_250008700.1:pseudogenic_exon:1;Parent=LTnewLM_250008700.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 103698 105688 . - . ID=LTnewLM_250008700.1:pep;Derives_from=LTnewLM_250008700.1;orthologous_to=LmjF.25.0340_mRNA;ortholog_cluster=OG0007536;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 107338 109599 1 - . ID=LTnewLM_250008800 LTnewLM_25 AUGUSTUS mRNA 107338 109599 1 - . ID=LTnewLM_250008800.1;Parent=LTnewLM_250008800 LTnewLM_25 AUGUSTUS CDS 107338 109599 1 - 0 ID=LTnewLM_250008800.1:CDS:1;Parent=LTnewLM_250008800.1 ### LTnewLM_25 . polypeptide 107338 109599 . - . ID=LTnewLM_250008800.1:pep;Derives_from=LTnewLM_250008800.1;orthologous_to=LmjF.25.0350_mRNA;ortholog_cluster=OG0002792;product=term%3DProtein of unknown function (DUF1308)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07000 LTnewLM_25 Pfam protein_match 107398 107568 . - . Parent=LTnewLM_250008800.1:pep;Name=PF07000;signature_desc=Protein of unknown function (DUF1308) ### LTnewLM_25 AUGUSTUS gene 110384 110758 1 - . ID=LTnewLM_250008900 LTnewLM_25 AUGUSTUS mRNA 110384 110758 1 - . ID=LTnewLM_250008900.1;Parent=LTnewLM_250008900 LTnewLM_25 AUGUSTUS CDS 110384 110758 1 - 0 ID=LTnewLM_250008900.1:CDS:1;Parent=LTnewLM_250008900.1 ### LTnewLM_25 . polypeptide 110384 110758 . - . ID=LTnewLM_250008900.1:pep;Derives_from=LTnewLM_250008900.1;orthologous_to=LmjF.25.0360_mRNA;ortholog_cluster=OG0002793;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 111958 112497 1 - . ID=LTnewLM_250009000 LTnewLM_25 AUGUSTUS mRNA 111958 112497 1 - . ID=LTnewLM_250009000.1;Parent=LTnewLM_250009000 LTnewLM_25 AUGUSTUS CDS 111958 112497 1 - 0 ID=LTnewLM_250009000.1:CDS:1;Parent=LTnewLM_250009000.1 ### LTnewLM_25 . polypeptide 111958 112497 . - . ID=LTnewLM_250009000.1:pep;Derives_from=LTnewLM_250009000.1;orthologous_to=LmjF.25.0370_mRNA;ortholog_cluster=OG0002794;product=term%3DFcf2 pre-rRNA processing%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08698 LTnewLM_25 Pfam protein_match 112093 112356 . - . Parent=LTnewLM_250009000.1:pep;Name=PF08698;signature_desc=Fcf2 pre-rRNA processing ### LTnewLM_25 AUGUSTUS gene 113397 115949 1 - . ID=LTnewLM_250009100 LTnewLM_25 AUGUSTUS mRNA 113397 115949 1 - . ID=LTnewLM_250009100.1;Parent=LTnewLM_250009100 LTnewLM_25 AUGUSTUS CDS 113397 115949 1 - 0 ID=LTnewLM_250009100.1:CDS:1;Parent=LTnewLM_250009100.1 ### LTnewLM_25 . polypeptide 113397 115949 . - . ID=LTnewLM_250009100.1:pep;Derives_from=LTnewLM_250009100.1;orthologous_to=LmjF.25.0380_mRNA;ortholog_cluster=OG0002795;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 Liftoff gene 117328 118044 . - . ID=LTnewLM_250009200;coverage=0.995;sequence_ID=0.938;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.0390_0 LTnewLM_25 Liftoff mRNA 117328 118044 . - . ID=LTnewLM_250009200.1;Parent=LTnewLM_250009200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 117328 118044 . - 0 ID=LTnewLM_250009200.1:CDS:1;Parent=LTnewLM_250009200.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 117328 118044 . - . ID=LTnewLM_250009200.1:pep;Derives_from=LTnewLM_250009200.1;orthologous_to=LmjF.25.0390_mRNA;ortholog_cluster=OG0002796;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 118819 119121 1 - . ID=LTnewLM_250009300 LTnewLM_25 AUGUSTUS mRNA 118819 119121 1 - . ID=LTnewLM_250009300.1;Parent=LTnewLM_250009300 LTnewLM_25 AUGUSTUS CDS 118819 119121 1 - 0 ID=LTnewLM_250009300.1:CDS:1;Parent=LTnewLM_250009300.1 ### LTnewLM_25 . polypeptide 118819 119121 . - . ID=LTnewLM_250009300.1:pep;Derives_from=LTnewLM_250009300.1;orthologous_to=LmjF.25.0400_mRNA;ortholog_cluster=OG0002797;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 120523 121410 1 - . ID=LTnewLM_250009400 LTnewLM_25 AUGUSTUS mRNA 120523 121410 1 - . ID=LTnewLM_250009400.1;Parent=LTnewLM_250009400 LTnewLM_25 AUGUSTUS CDS 120523 121410 1 - 0 ID=LTnewLM_250009400.1:CDS:1;Parent=LTnewLM_250009400.1 ### LTnewLM_25 . polypeptide 120523 121410 . - . ID=LTnewLM_250009400.1:pep;Derives_from=LTnewLM_250009400.1;orthologous_to=LmjF.25.0410_mRNA;ortholog_cluster=OG0002798;product=term%3DTranslation initiation factor SUI1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01253;Ontology_term=GO:0006413,GO:0003743 LTnewLM_25 Pfam protein_match 120580 120810 . - . Parent=LTnewLM_250009400.1:pep;Name=PF01253;signature_desc=Translation initiation factor SUI1;Ontology_term=GO:0003743,GO:0006413 ### LTnewLM_25 AUGUSTUS gene 122706 127646 1 - . ID=LTnewLM_250009500 LTnewLM_25 AUGUSTUS mRNA 122706 127646 1 - . ID=LTnewLM_250009500.1;Parent=LTnewLM_250009500 LTnewLM_25 AUGUSTUS CDS 122706 127646 1 - 0 ID=LTnewLM_250009500.1:CDS:1;Parent=LTnewLM_250009500.1 ### LTnewLM_25 . polypeptide 122706 127646 . - . ID=LTnewLM_250009500.1:pep;Derives_from=LTnewLM_250009500.1;orthologous_to=LmjF.25.0420_mRNA;ortholog_cluster=OG0002799;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 128980 132033 1 - . ID=LTnewLM_250009600 LTnewLM_25 AUGUSTUS mRNA 128980 132033 1 - . ID=LTnewLM_250009600.1;Parent=LTnewLM_250009600 LTnewLM_25 AUGUSTUS CDS 128980 132033 1 - 0 ID=LTnewLM_250009600.1:CDS:1;Parent=LTnewLM_250009600.1 ### LTnewLM_25 . polypeptide 128980 132033 . - . ID=LTnewLM_250009600.1:pep;Derives_from=LTnewLM_250009600.1;orthologous_to=LmjF.25.0430_mRNA;ortholog_cluster=OG0002800;product=term%3DWD domain%2C G-beta repeat/Anaphase-promoting complex subunit 4 WD40 domain/Utp13 specific WD40 associated domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF12894|Pfam:PF08625;Ontology_term=GO:0006364,GO:0005515,GO:0032040 LTnewLM_25 Pfam protein_match 129085 129489 . - . Parent=LTnewLM_250009600.1:pep;Name=PF08625;signature_desc=Utp13 specific WD40 associated domain;Ontology_term=GO:0006364,GO:0032040 LTnewLM_25 Pfam protein_match 129751 130002 . - . Parent=LTnewLM_250009600.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_25 Pfam protein_match 129817 129915 . - . Parent=LTnewLM_250009600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 129949 130038 . - . Parent=LTnewLM_250009600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 130270 130371 . - . Parent=LTnewLM_250009600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 131173 131253 . - . Parent=LTnewLM_250009600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 132950 135061 1 - . ID=LTnewLM_250009700 LTnewLM_25 AUGUSTUS mRNA 132950 135061 1 - . ID=LTnewLM_250009700.1;Parent=LTnewLM_250009700 LTnewLM_25 AUGUSTUS CDS 132950 135061 1 - 0 ID=LTnewLM_250009700.1:CDS:1;Parent=LTnewLM_250009700.1 ### LTnewLM_25 . polypeptide 132950 135061 . - . ID=LTnewLM_250009700.1:pep;Derives_from=LTnewLM_250009700.1;orthologous_to=LmjF.25.0440_mRNA;ortholog_cluster=OG0002801;product=term%3DTranscription factor TFIIB repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00382;Ontology_term=GO:0017025 LTnewLM_25 Pfam protein_match 134273 134548 . - . Parent=LTnewLM_250009700.1:pep;Name=PF00382;signature_desc=Transcription factor TFIIB repeat;Ontology_term=GO:0017025 LTnewLM_25 Pfam protein_match 134615 134818 . - . Parent=LTnewLM_250009700.1:pep;Name=PF00382;signature_desc=Transcription factor TFIIB repeat;Ontology_term=GO:0017025 ### LTnewLM_25 AUGUSTUS gene 136276 137418 1 - . ID=LTnewLM_250009800 LTnewLM_25 AUGUSTUS mRNA 136276 137418 1 - . ID=LTnewLM_250009800.1;Parent=LTnewLM_250009800 LTnewLM_25 AUGUSTUS CDS 136276 137418 1 - 0 ID=LTnewLM_250009800.1:CDS:1;Parent=LTnewLM_250009800.1 ### LTnewLM_25 . polypeptide 136276 137418 . - . ID=LTnewLM_250009800.1:pep;Derives_from=LTnewLM_250009800.1;orthologous_to=LmjF.25.0450_mRNA;ortholog_cluster=OG0002802;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_25 Pfam protein_match 136894 137148 . - . Parent=LTnewLM_250009800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_25 AUGUSTUS gene 139468 139869 1 - . ID=LTnewLM_250009900 LTnewLM_25 AUGUSTUS mRNA 139468 139869 1 - . ID=LTnewLM_250009900.1;Parent=LTnewLM_250009900 LTnewLM_25 AUGUSTUS CDS 139468 139869 1 - 0 ID=LTnewLM_250009900.1:CDS:1;Parent=LTnewLM_250009900.1 ### LTnewLM_25 . polypeptide 139468 139869 . - . ID=LTnewLM_250009900.1:pep;Derives_from=LTnewLM_250009900.1;orthologous_to=LmjF.25.0460_mRNA;ortholog_cluster=OG0002803;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 142693 146136 1 - . ID=LTnewLM_250010000 LTnewLM_25 AUGUSTUS mRNA 142693 146136 1 - . ID=LTnewLM_250010000.1;Parent=LTnewLM_250010000 LTnewLM_25 AUGUSTUS CDS 142693 146136 1 - 0 ID=LTnewLM_250010000.1:CDS:1;Parent=LTnewLM_250010000.1 ### LTnewLM_25 . polypeptide 142693 146136 . - . ID=LTnewLM_250010000.1:pep;Derives_from=LTnewLM_250010000.1;orthologous_to=LmjF.25.0470_mRNA;ortholog_cluster=OG0002804;product=term%3DKringle domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00051 LTnewLM_25 Pfam protein_match 145771 145980 . - . Parent=LTnewLM_250010000.1:pep;Name=PF00051;signature_desc=Kringle domain ### LTnewLM_25 Liftoff gene 148385 153460 . - . ID=LTnewLM_250010100;coverage=0.998;sequence_ID=0.919;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.0480_0 LTnewLM_25 Liftoff mRNA 148385 153460 . - . ID=LTnewLM_250010100.1;Parent=LTnewLM_250010100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 148385 153460 . - 0 ID=LTnewLM_250010100.1:CDS:1;Parent=LTnewLM_250010100.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 148385 153460 . - . ID=LTnewLM_250010100.1:pep;Derives_from=LTnewLM_250010100.1;orthologous_to=LmjF.25.0480_mRNA;ortholog_cluster=OG0002805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 160908 161426 1 - . ID=LTnewLM_250010200 LTnewLM_25 AUGUSTUS mRNA 160908 161426 1 - . ID=LTnewLM_250010200.1;Parent=LTnewLM_250010200 LTnewLM_25 AUGUSTUS CDS 160908 161426 1 - 0 ID=LTnewLM_250010200.1:CDS:1;Parent=LTnewLM_250010200.1 ### LTnewLM_25 . polypeptide 160908 161426 . - . ID=LTnewLM_250010200.1:pep;Derives_from=LTnewLM_250010200.1;orthologous_to=LTnewLM_250010300.1,LmjF.25.0490_mRNA,LmjF.25.0500_mRNA;ortholog_cluster=OG0000178;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 161112 161321 . - . Parent=LTnewLM_250010200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_25 AUGUSTUS gene 170555 171058 1 - . ID=LTnewLM_250010300 LTnewLM_25 AUGUSTUS mRNA 170555 171058 1 - . ID=LTnewLM_250010300.1;Parent=LTnewLM_250010300 LTnewLM_25 AUGUSTUS CDS 170555 171058 1 - 0 ID=LTnewLM_250010300.1:CDS:1;Parent=LTnewLM_250010300.1 ### LTnewLM_25 . polypeptide 170555 171058 . - . ID=LTnewLM_250010300.1:pep;Derives_from=LTnewLM_250010300.1;orthologous_to=LTnewLM_250010200.1,LmjF.25.0490_mRNA,LmjF.25.0500_mRNA;ortholog_cluster=OG0000178;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 170759 170968 . - . Parent=LTnewLM_250010300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_25 AUGUSTUS gene 172436 174121 1 - . ID=LTnewLM_250010400 LTnewLM_25 AUGUSTUS mRNA 172436 174121 1 - . ID=LTnewLM_250010400.1;Parent=LTnewLM_250010400 LTnewLM_25 AUGUSTUS CDS 172436 174121 1 - 0 ID=LTnewLM_250010400.1:CDS:1;Parent=LTnewLM_250010400.1 ### LTnewLM_25 . polypeptide 172436 174121 . - . ID=LTnewLM_250010400.1:pep;Derives_from=LTnewLM_250010400.1;orthologous_to=LmjF.25.0510_mRNA;ortholog_cluster=OG0002806;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 175662 176384 1 - . ID=LTnewLM_250010500 LTnewLM_25 AUGUSTUS mRNA 175662 176384 1 - . ID=LTnewLM_250010500.1;Parent=LTnewLM_250010500 LTnewLM_25 AUGUSTUS CDS 175662 176384 1 - 0 ID=LTnewLM_250010500.1:CDS:1;Parent=LTnewLM_250010500.1 ### LTnewLM_25 . polypeptide 175662 176384 . - . ID=LTnewLM_250010500.1:pep;Derives_from=LTnewLM_250010500.1;orthologous_to=LmjF.25.0520_mRNA;ortholog_cluster=OG0002807;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_25 Pfam protein_match 176040 176249 . - . Parent=LTnewLM_250010500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_25 AUGUSTUS gene 179911 181881 1 - . ID=LTnewLM_250010600 LTnewLM_25 AUGUSTUS mRNA 179911 181881 1 - . ID=LTnewLM_250010600.1;Parent=LTnewLM_250010600 LTnewLM_25 AUGUSTUS CDS 179911 181881 1 - 0 ID=LTnewLM_250010600.1:CDS:1;Parent=LTnewLM_250010600.1 ### LTnewLM_25 . polypeptide 179911 181881 . - . ID=LTnewLM_250010600.1:pep;Derives_from=LTnewLM_250010600.1;orthologous_to=LmjF.25.0530_mRNA;ortholog_cluster=OG0002808;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_25 Pfam protein_match 180175 180645 . - . Parent=LTnewLM_250010600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_25 Pfam protein_match 180871 181623 . - . Parent=LTnewLM_250010600.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_25 AUGUSTUS gene 189117 190004 1 - . ID=LTnewLM_250010700 LTnewLM_25 AUGUSTUS mRNA 189117 190004 1 - . ID=LTnewLM_250010700.1;Parent=LTnewLM_250010700 LTnewLM_25 AUGUSTUS CDS 189117 190004 1 - 0 ID=LTnewLM_250010700.1:CDS:1;Parent=LTnewLM_250010700.1 ### LTnewLM_25 . polypeptide 189117 190004 . - . ID=LTnewLM_250010700.1:pep;Derives_from=LTnewLM_250010700.1;orthologous_to=LmjF.25.0540_mRNA;ortholog_cluster=OG0002809;product=term%3DScd6-like Sm domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12701 LTnewLM_25 Pfam protein_match 189777 189992 . - . Parent=LTnewLM_250010700.1:pep;Name=PF12701;signature_desc=Scd6-like Sm domain ### LTnewLM_25 AUGUSTUS gene 191263 193293 1 - . ID=LTnewLM_250010800 LTnewLM_25 AUGUSTUS mRNA 191263 193293 1 - . ID=LTnewLM_250010800.1;Parent=LTnewLM_250010800 LTnewLM_25 AUGUSTUS CDS 191263 193293 1 - 0 ID=LTnewLM_250010800.1:CDS:1;Parent=LTnewLM_250010800.1 ### LTnewLM_25 . polypeptide 191263 193293 . - . ID=LTnewLM_250010800.1:pep;Derives_from=LTnewLM_250010800.1;orthologous_to=LmjF.25.0550_mRNA;ortholog_cluster=OG0002810;product=term%3DFamily of unknown function (DUF5578)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17741 LTnewLM_25 Pfam protein_match 192898 193083 . - . Parent=LTnewLM_250010800.1:pep;Name=PF17741;signature_desc=Family of unknown function (DUF5578) ### LTnewLM_25 AUGUSTUS gene 194367 194960 1 - . ID=LTnewLM_250010900 LTnewLM_25 AUGUSTUS mRNA 194367 194960 1 - . ID=LTnewLM_250010900.1;Parent=LTnewLM_250010900 LTnewLM_25 AUGUSTUS CDS 194367 194960 1 - 0 ID=LTnewLM_250010900.1:CDS:1;Parent=LTnewLM_250010900.1 ### LTnewLM_25 . polypeptide 194367 194960 . - . ID=LTnewLM_250010900.1:pep;Derives_from=LTnewLM_250010900.1;orthologous_to=LmjF.25.0560_mRNA;ortholog_cluster=OG0002811;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 195862 196842 1 - . ID=LTnewLM_250011000 LTnewLM_25 AUGUSTUS mRNA 195862 196842 1 - . ID=LTnewLM_250011000.1;Parent=LTnewLM_250011000 LTnewLM_25 AUGUSTUS CDS 195862 196842 1 - 0 ID=LTnewLM_250011000.1:CDS:1;Parent=LTnewLM_250011000.1 ### LTnewLM_25 . polypeptide 195862 196842 . - . ID=LTnewLM_250011000.1:pep;Derives_from=LTnewLM_250011000.1;orthologous_to=LmjF.25.0570_mRNA;ortholog_cluster=OG0002812;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13350|Pfam:PF03162 LTnewLM_25 Pfam protein_match 195913 196158 . - . Parent=LTnewLM_250011000.1:pep;Name=PF03162;signature_desc=Tyrosine phosphatase family LTnewLM_25 Pfam protein_match 195982 196164 . - . Parent=LTnewLM_250011000.1:pep;Name=PF13350;signature_desc=Tyrosine phosphatase family ### LTnewLM_25 AUGUSTUS gene 197653 198225 1 - . ID=LTnewLM_250011100 LTnewLM_25 AUGUSTUS mRNA 197653 198225 1 - . ID=LTnewLM_250011100.1;Parent=LTnewLM_250011100 LTnewLM_25 AUGUSTUS CDS 197653 198225 1 - 0 ID=LTnewLM_250011100.1:CDS:1;Parent=LTnewLM_250011100.1 ### LTnewLM_25 . polypeptide 197653 198225 . - . ID=LTnewLM_250011100.1:pep;Derives_from=LTnewLM_250011100.1;orthologous_to=LmjF.25.0580_mRNA;ortholog_cluster=OG0002813;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 199743 200042 . - . ID=LTnewLM_250011200.1:pep;Derives_from=LTnewLM_250011200.1;orthologous_to=LmjF.25.0590.1_mRNA;ortholog_cluster=OG0007537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 199743 200298 . - . ID=LTnewLM_250011200.2:pep;Derives_from=LTnewLM_250011200.2;product=term%3Dhypothetical protein ### LTnewLM_25 . pseudogene 199743 201450 . - . ID=LTnewLM_250011200:pseudogene;coverage=0.988;sequence_ID=0.909;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.0590_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 199743 200068 . - . ID=LTnewLM_250011200.1;Parent=LTnewLM_250011200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 199743 200042 . - . ID=LTnewLM_250011200.1:pseudogenic_exon:1;Parent=LTnewLM_250011200.1;extra_copy_number=0 LTnewLM_25 . pseudogenic_transcript 199743 201450 . - . ID=LTnewLM_250011200.2;Parent=LTnewLM_250011200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 199743 200298 . - . ID=LTnewLM_250011200.2:pseudogenic_exon:1;Parent=LTnewLM_250011200.2;extra_copy_number=0 ### LTnewLM_25 AUGUSTUS gene 202789 204036 1 - . ID=LTnewLM_250011300 LTnewLM_25 AUGUSTUS mRNA 202789 204036 1 - . ID=LTnewLM_250011300.1;Parent=LTnewLM_250011300 LTnewLM_25 AUGUSTUS CDS 202789 204036 1 - 0 ID=LTnewLM_250011300.1:CDS:1;Parent=LTnewLM_250011300.1 ### LTnewLM_25 . polypeptide 202789 204036 . - . ID=LTnewLM_250011300.1:pep;Derives_from=LTnewLM_250011300.1;orthologous_to=LmjF.25.0600_mRNA;ortholog_cluster=OG0002814;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 205077 209490 . - . ID=LTnewLM_250011400:pseudogene;coverage=0.999;sequence_ID=0.958;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0610_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 205077 209490 . - . ID=LTnewLM_250011400.1;Parent=LTnewLM_250011400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 205077 209490 . - . ID=LTnewLM_250011400.1:pseudogenic_exon:1;Parent=LTnewLM_250011400.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 205077 209490 . - . ID=LTnewLM_250011400.1:pep;Derives_from=LTnewLM_250011400.1;orthologous_to=LmjF.25.0610_mRNA;ortholog_cluster=OG0007538;product=term%3DRaptor N-terminal CASPase like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14538 LTnewLM_25 Pfam protein_match 208657 209148 . - . Parent=LTnewLM_250011400.1:pep;Name=PF14538;signature_desc=Raptor N-terminal CASPase like domain ### LTnewLM_25 AUGUSTUS gene 211372 216222 1 - . ID=LTnewLM_250011500 LTnewLM_25 AUGUSTUS mRNA 211372 216222 1 - . ID=LTnewLM_250011500.1;Parent=LTnewLM_250011500 LTnewLM_25 AUGUSTUS CDS 211372 216222 1 - 0 ID=LTnewLM_250011500.1:CDS:1;Parent=LTnewLM_250011500.1 ### LTnewLM_25 . polypeptide 211372 216222 . - . ID=LTnewLM_250011500.1:pep;Derives_from=LTnewLM_250011500.1;orthologous_to=LmjF.25.0620_mRNA;ortholog_cluster=OG0002815;product=term%3DRNA polymerase beta subunit/RNA polymerase Rpb2%2C domain 3/RNA polymerase I%2C Rpa2 specific domain/RNA polymerase Rpb2%2C domain 6/RNA polymerase Rpb2%2C domain 7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04563|Pfam:PF04565|Pfam:PF06883|Pfam:PF00562|Pfam:PF04560;Ontology_term=GO:0006351,GO:0003899,GO:0005634,GO:0003677 LTnewLM_25 Pfam protein_match 211399 211701 . - . Parent=LTnewLM_250011500.1:pep;Name=PF04560;signature_desc=RNA polymerase Rpb2%2C domain 7;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_25 Pfam protein_match 211708 212901 . - . Parent=LTnewLM_250011500.1:pep;Name=PF00562;signature_desc=RNA polymerase Rpb2%2C domain 6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_25 Pfam protein_match 213100 213309 . - . Parent=LTnewLM_250011500.1:pep;Name=PF06883;signature_desc=RNA polymerase I%2C Rpa2 specific domain;Ontology_term=GO:0003899,GO:0006351,GO:0005634 LTnewLM_25 Pfam protein_match 213466 213648 . - . Parent=LTnewLM_250011500.1:pep;Name=PF04565;signature_desc=RNA polymerase Rpb2%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_25 Pfam protein_match 213877 214821 . - . Parent=LTnewLM_250011500.1:pep;Name=PF04563;signature_desc=RNA polymerase beta subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_25 AUGUSTUS gene 217435 218340 1 - . ID=LTnewLM_250011600 LTnewLM_25 AUGUSTUS mRNA 217435 218340 1 - . ID=LTnewLM_250011600.1;Parent=LTnewLM_250011600 LTnewLM_25 AUGUSTUS CDS 217435 218340 1 - 0 ID=LTnewLM_250011600.1:CDS:1;Parent=LTnewLM_250011600.1 ### LTnewLM_25 . polypeptide 217435 218340 . - . ID=LTnewLM_250011600.1:pep;Derives_from=LTnewLM_250011600.1;orthologous_to=LmjF.25.0630_mRNA;ortholog_cluster=OG0002816;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 219086 219574 1 - . ID=LTnewLM_250011700 LTnewLM_25 AUGUSTUS mRNA 219086 219574 1 - . ID=LTnewLM_250011700.1;Parent=LTnewLM_250011700 LTnewLM_25 AUGUSTUS CDS 219086 219574 1 - 0 ID=LTnewLM_250011700.1:CDS:1;Parent=LTnewLM_250011700.1 ### LTnewLM_25 . polypeptide 219086 219574 . - . ID=LTnewLM_250011700.1:pep;Derives_from=LTnewLM_250011700.1;orthologous_to=LmjF.25.0640_mRNA;ortholog_cluster=OG0002817;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 220062 222059 1 - . ID=LTnewLM_250011800 LTnewLM_25 AUGUSTUS mRNA 220062 222059 1 - . ID=LTnewLM_250011800.1;Parent=LTnewLM_250011800 LTnewLM_25 AUGUSTUS CDS 220062 222059 1 - 0 ID=LTnewLM_250011800.1:CDS:1;Parent=LTnewLM_250011800.1 ### LTnewLM_25 . polypeptide 220062 222059 . - . ID=LTnewLM_250011800.1:pep;Derives_from=LTnewLM_250011800.1;orthologous_to=LmjF.25.0650_mRNA;ortholog_cluster=OG0002818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 222948 223235 1 - . ID=LTnewLM_250011900 LTnewLM_25 AUGUSTUS mRNA 222948 223235 1 - . ID=LTnewLM_250011900.1;Parent=LTnewLM_250011900 LTnewLM_25 AUGUSTUS CDS 222948 223235 1 - 0 ID=LTnewLM_250011900.1:CDS:1;Parent=LTnewLM_250011900.1 ### LTnewLM_25 . polypeptide 222948 223235 . - . ID=LTnewLM_250011900.1:pep;Derives_from=LTnewLM_250011900.1;orthologous_to=LmjF.25.0660_mRNA;ortholog_cluster=OG0002819;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 226165 227823 1 - . ID=LTnewLM_250012000 LTnewLM_25 AUGUSTUS mRNA 226165 227823 1 - . ID=LTnewLM_250012000.1;Parent=LTnewLM_250012000 LTnewLM_25 AUGUSTUS CDS 226165 227823 1 - 0 ID=LTnewLM_250012000.1:CDS:1;Parent=LTnewLM_250012000.1 ### LTnewLM_25 . polypeptide 226165 227823 . - . ID=LTnewLM_250012000.1:pep;Derives_from=LTnewLM_250012000.1;orthologous_to=LmjF.25.0670_mRNA;ortholog_cluster=OG0002820;product=term%3DENTH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01417 LTnewLM_25 Pfam protein_match 227410 227763 . - . Parent=LTnewLM_250012000.1:pep;Name=PF01417;signature_desc=ENTH domain ### LTnewLM_25 AUGUSTUS gene 231396 236573 1 - . ID=LTnewLM_250012100 LTnewLM_25 AUGUSTUS mRNA 231396 236573 1 - . ID=LTnewLM_250012100.1;Parent=LTnewLM_250012100 LTnewLM_25 AUGUSTUS CDS 231396 236573 1 - 0 ID=LTnewLM_250012100.1:CDS:1;Parent=LTnewLM_250012100.1 ### LTnewLM_25 . polypeptide 231396 236573 . - . ID=LTnewLM_250012100.1:pep;Derives_from=LTnewLM_250012100.1;orthologous_to=LmjF.25.0680_mRNA;ortholog_cluster=OG0002821;product=term%3DAlpha-kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02816;Ontology_term=GO:0004674,GO:0006468,GO:0005524 LTnewLM_25 Pfam protein_match 232530 233039 . - . Parent=LTnewLM_250012100.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 ### LTnewLM_25 AUGUSTUS gene 243219 246451 0.77 - . ID=LTnewLM_250012200 LTnewLM_25 AUGUSTUS mRNA 243219 246451 0.77 - . ID=LTnewLM_250012200.1;Parent=LTnewLM_250012200 LTnewLM_25 AUGUSTUS CDS 243219 246151 0.77 - 2 ID=LTnewLM_250012200.1:CDS:1;Parent=LTnewLM_250012200.1 LTnewLM_25 AUGUSTUS CDS 246391 246451 0.95 - 0 ID=LTnewLM_250012200.1:CDS:2;Parent=LTnewLM_250012200.1 ### LTnewLM_25 . polypeptide 243219 246451 . - . ID=LTnewLM_250012200.1:pep;Derives_from=LTnewLM_250012200.1;orthologous_to=LmjF.25.0690_mRNA;ortholog_cluster=OG0002822;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 247180 248805 1 - . ID=LTnewLM_250012300 LTnewLM_25 AUGUSTUS mRNA 247180 248805 1 - . ID=LTnewLM_250012300.1;Parent=LTnewLM_250012300 LTnewLM_25 AUGUSTUS CDS 247180 248805 1 - 0 ID=LTnewLM_250012300.1:CDS:1;Parent=LTnewLM_250012300.1 ### LTnewLM_25 . polypeptide 247180 248805 . - . ID=LTnewLM_250012300.1:pep;Derives_from=LTnewLM_250012300.1;orthologous_to=LmjF.25.0700_mRNA;ortholog_cluster=OG0002823;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 253186 254271 1 - . ID=LTnewLM_250012400 LTnewLM_25 AUGUSTUS mRNA 253186 254271 1 - . ID=LTnewLM_250012400.1;Parent=LTnewLM_250012400 LTnewLM_25 AUGUSTUS CDS 253186 254271 1 - 0 ID=LTnewLM_250012400.1:CDS:1;Parent=LTnewLM_250012400.1 ### LTnewLM_25 . polypeptide 253186 254271 . - . ID=LTnewLM_250012400.1:pep;Derives_from=LTnewLM_250012400.1;orthologous_to=LmjF.25.0710_mRNA;ortholog_cluster=OG0002824;product=term%3DSCAMP family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04144;Ontology_term=GO:0015031,GO:0016021 LTnewLM_25 Pfam protein_match 253243 253782 . - . Parent=LTnewLM_250012400.1:pep;Name=PF04144;signature_desc=SCAMP family;Ontology_term=GO:0015031,GO:0016021 ### LTnewLM_25 AUGUSTUS gene 254714 255178 1 - . ID=LTnewLM_250012500 LTnewLM_25 AUGUSTUS mRNA 254714 255178 1 - . ID=LTnewLM_250012500.1;Parent=LTnewLM_250012500 LTnewLM_25 AUGUSTUS CDS 254714 255178 1 - 0 ID=LTnewLM_250012500.1:CDS:1;Parent=LTnewLM_250012500.1 ### LTnewLM_25 . polypeptide 254714 255178 . - . ID=LTnewLM_250012500.1:pep;Derives_from=LTnewLM_250012500.1;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_25 Pfam protein_match 254903 255133 . - . Parent=LTnewLM_250012500.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_25 AUGUSTUS gene 255635 256474 1 - . ID=LTnewLM_250012600 LTnewLM_25 AUGUSTUS mRNA 255635 256474 1 - . ID=LTnewLM_250012600.1;Parent=LTnewLM_250012600 LTnewLM_25 AUGUSTUS CDS 255635 256474 1 - 0 ID=LTnewLM_250012600.1:CDS:1;Parent=LTnewLM_250012600.1 ### LTnewLM_25 . polypeptide 255635 256474 . - . ID=LTnewLM_250012600.1:pep;Derives_from=LTnewLM_250012600.1;orthologous_to=LmjF.25.0715_mRNA;ortholog_cluster=OG0002825;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 256987 257538 1 - . ID=LTnewLM_250012700 LTnewLM_25 AUGUSTUS mRNA 256987 257538 1 - . ID=LTnewLM_250012700.1;Parent=LTnewLM_250012700 LTnewLM_25 AUGUSTUS CDS 256987 257538 1 - 0 ID=LTnewLM_250012700.1:CDS:1;Parent=LTnewLM_250012700.1 ### LTnewLM_25 . polypeptide 256987 257538 . - . ID=LTnewLM_250012700.1:pep;Derives_from=LTnewLM_250012700.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 259017 259517 1 + . ID=LTnewLM_250012800 LTnewLM_25 AUGUSTUS mRNA 259017 259517 1 + . ID=LTnewLM_250012800.1;Parent=LTnewLM_250012800 LTnewLM_25 AUGUSTUS CDS 259017 259517 1 + 0 ID=LTnewLM_250012800.1:CDS:1;Parent=LTnewLM_250012800.1 ### LTnewLM_25 . polypeptide 259017 259517 . + . ID=LTnewLM_250012800.1:pep;Derives_from=LTnewLM_250012800.1;orthologous_to=LTnewLM_250012900.1,LTnewLM_250013000.1,LmjF.25.0720_mRNA,LmjF.25.0730_mRNA;ortholog_cluster=OG0000091;product=term%3DEukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01287;Ontology_term=GO:0003723,GO:0003746,GO:0006452,GO:0045905,GO:0045901,GO:0043022 LTnewLM_25 Pfam protein_match 259272 259496 . + . Parent=LTnewLM_250012800.1:pep;Name=PF01287;signature_desc=Eukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold;Ontology_term=GO:0003723,GO:0003746,GO:0043022,GO:0006452,GO:0045901,GO:0045905 ### LTnewLM_25 AUGUSTUS gene 259909 260409 1 + . ID=LTnewLM_250012900 LTnewLM_25 AUGUSTUS mRNA 259909 260409 1 + . ID=LTnewLM_250012900.1;Parent=LTnewLM_250012900 LTnewLM_25 AUGUSTUS CDS 259909 260409 1 + 0 ID=LTnewLM_250012900.1:CDS:1;Parent=LTnewLM_250012900.1 ### LTnewLM_25 . polypeptide 259909 260409 . + . ID=LTnewLM_250012900.1:pep;Derives_from=LTnewLM_250012900.1;orthologous_to=LTnewLM_250012800.1,LTnewLM_250013000.1,LmjF.25.0720_mRNA,LmjF.25.0730_mRNA;ortholog_cluster=OG0000091;product=term%3DEukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01287;Ontology_term=GO:0003723,GO:0003746,GO:0006452,GO:0045905,GO:0045901,GO:0043022 LTnewLM_25 Pfam protein_match 260164 260388 . + . Parent=LTnewLM_250012900.1:pep;Name=PF01287;signature_desc=Eukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold;Ontology_term=GO:0003723,GO:0003746,GO:0043022,GO:0006452,GO:0045901,GO:0045905 ### LTnewLM_25 AUGUSTUS gene 260802 261302 1 + . ID=LTnewLM_250013000 LTnewLM_25 AUGUSTUS mRNA 260802 261302 1 + . ID=LTnewLM_250013000.1;Parent=LTnewLM_250013000 LTnewLM_25 AUGUSTUS CDS 260802 261302 1 + 0 ID=LTnewLM_250013000.1:CDS:1;Parent=LTnewLM_250013000.1 ### LTnewLM_25 . polypeptide 260802 261302 . + . ID=LTnewLM_250013000.1:pep;Derives_from=LTnewLM_250013000.1;orthologous_to=LTnewLM_250012800.1,LTnewLM_250012900.1,LmjF.25.0720_mRNA,LmjF.25.0730_mRNA;ortholog_cluster=OG0000091;product=term%3DEukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01287;Ontology_term=GO:0003723,GO:0003746,GO:0006452,GO:0045905,GO:0045901,GO:0043022 LTnewLM_25 Pfam protein_match 261057 261281 . + . Parent=LTnewLM_250013000.1:pep;Name=PF01287;signature_desc=Eukaryotic elongation factor 5A hypusine%2C DNA-binding OB fold;Ontology_term=GO:0003723,GO:0003746,GO:0043022,GO:0006452,GO:0045901,GO:0045905 ### LTnewLM_25 AUGUSTUS gene 262813 266091 1 + . ID=LTnewLM_250013100 LTnewLM_25 AUGUSTUS mRNA 262813 266091 1 + . ID=LTnewLM_250013100.1;Parent=LTnewLM_250013100 LTnewLM_25 AUGUSTUS CDS 262813 266091 1 + 0 ID=LTnewLM_250013100.1:CDS:1;Parent=LTnewLM_250013100.1 ### LTnewLM_25 . polypeptide 262813 266091 . + . ID=LTnewLM_250013100.1:pep;Derives_from=LTnewLM_250013100.1;orthologous_to=LmjF.25.0740_mRNA;ortholog_cluster=OG0002826;product=term%3DPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/SNF2-related domain/Ring finger domain/Zinc finger%2C C3HC4 type (RING finger)/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00645|Pfam:PF00176|Pfam:PF13639|Pfam:PF00097|Pfam:PF00271;Ontology_term=GO:0008270,GO:0005524,GO:0005515,GO:0046872,GO:0003677 LTnewLM_25 Pfam protein_match 262915 263136 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00645;signature_desc=Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region;Ontology_term=GO:0003677,GO:0008270 LTnewLM_25 Pfam protein_match 263290 263577 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_25 Pfam protein_match 264484 264687 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_25 Pfam protein_match 264766 265128 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_25 Pfam protein_match 265183 265314 . + . Parent=LTnewLM_250013100.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_25 Pfam protein_match 265183 265314 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_25 Pfam protein_match 265585 265917 . + . Parent=LTnewLM_250013100.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_25 AUGUSTUS gene 268231 269451 1 + . ID=LTnewLM_250013200 LTnewLM_25 AUGUSTUS mRNA 268231 269451 1 + . ID=LTnewLM_250013200.1;Parent=LTnewLM_250013200 LTnewLM_25 AUGUSTUS CDS 268231 269451 1 + 0 ID=LTnewLM_250013200.1:CDS:1;Parent=LTnewLM_250013200.1 ### LTnewLM_25 . polypeptide 268231 269451 . + . ID=LTnewLM_250013200.1:pep;Derives_from=LTnewLM_250013200.1;orthologous_to=LmjF.25.0750_mRNA;ortholog_cluster=OG0002827;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_25 Pfam protein_match 268297 269028 . + . Parent=LTnewLM_250013200.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_25 AUGUSTUS gene 275721 276764 1 + . ID=LTnewLM_250013300 LTnewLM_25 AUGUSTUS mRNA 275721 276764 1 + . ID=LTnewLM_250013300.1;Parent=LTnewLM_250013300 LTnewLM_25 AUGUSTUS CDS 275721 276764 1 + 0 ID=LTnewLM_250013300.1:CDS:1;Parent=LTnewLM_250013300.1 ### LTnewLM_25 . polypeptide 275721 276764 . + . ID=LTnewLM_250013300.1:pep;Derives_from=LTnewLM_250013300.1;orthologous_to=LmjF.25.0760_mRNA;ortholog_cluster=OG0002828;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 277214 278737 . + . ID=LTnewLM_250013400:pseudogene;coverage=0.981;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0770_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 277214 278737 . + . ID=LTnewLM_250013400.1;Parent=LTnewLM_250013400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 277214 278737 . + . ID=LTnewLM_250013400.1:pseudogenic_exon:1;Parent=LTnewLM_250013400.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 277214 278737 . + . ID=LTnewLM_250013400.1:pep;Derives_from=LTnewLM_250013400.1;orthologous_to=LmjF.25.0770_mRNA;ortholog_cluster=OG0007539;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 281558 282478 1 + . ID=LTnewLM_250013500 LTnewLM_25 AUGUSTUS mRNA 281558 282478 1 + . ID=LTnewLM_250013500.1;Parent=LTnewLM_250013500 LTnewLM_25 AUGUSTUS CDS 281558 282478 1 + 0 ID=LTnewLM_250013500.1:CDS:1;Parent=LTnewLM_250013500.1 ### LTnewLM_25 . polypeptide 281558 282478 . + . ID=LTnewLM_250013500.1:pep;Derives_from=LTnewLM_250013500.1;orthologous_to=LmjF.25.0780_mRNA;ortholog_cluster=OG0002829;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 286621 290127 1 + . ID=LTnewLM_250013600 LTnewLM_25 AUGUSTUS mRNA 286621 290127 1 + . ID=LTnewLM_250013600.1;Parent=LTnewLM_250013600 LTnewLM_25 AUGUSTUS CDS 286621 290127 1 + 0 ID=LTnewLM_250013600.1:CDS:1;Parent=LTnewLM_250013600.1 ### LTnewLM_25 . polypeptide 286621 290127 . + . ID=LTnewLM_250013600.1:pep;Derives_from=LTnewLM_250013600.1;orthologous_to=LmjF.25.0790_mRNA;ortholog_cluster=OG0002830;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 290619 291350 1 + . ID=LTnewLM_250013700 LTnewLM_25 AUGUSTUS mRNA 290619 291350 1 + . ID=LTnewLM_250013700.1;Parent=LTnewLM_250013700 LTnewLM_25 AUGUSTUS CDS 290619 291350 1 + 0 ID=LTnewLM_250013700.1:CDS:1;Parent=LTnewLM_250013700.1 ### LTnewLM_25 . polypeptide 290619 291350 . + . ID=LTnewLM_250013700.1:pep;Derives_from=LTnewLM_250013700.1;orthologous_to=LmjF.25.0800_mRNA;ortholog_cluster=OG0002831;product=term%3DDNL zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05180;Ontology_term=GO:0008270 LTnewLM_25 Pfam protein_match 291066 291245 . + . Parent=LTnewLM_250013700.1:pep;Name=PF05180;signature_desc=DNL zinc finger;Ontology_term=GO:0008270 ### LTnewLM_25 AUGUSTUS gene 295294 298359 1 + . ID=LTnewLM_250013800 LTnewLM_25 AUGUSTUS mRNA 295294 298359 1 + . ID=LTnewLM_250013800.1;Parent=LTnewLM_250013800 LTnewLM_25 AUGUSTUS CDS 295294 298359 1 + 0 ID=LTnewLM_250013800.1:CDS:1;Parent=LTnewLM_250013800.1 ### LTnewLM_25 . polypeptide 295294 298359 . + . ID=LTnewLM_250013800.1:pep;Derives_from=LTnewLM_250013800.1;orthologous_to=LmjF.25.0810_mRNA;ortholog_cluster=OG0002832;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 300643 301026 1 + . ID=LTnewLM_250013900 LTnewLM_25 AUGUSTUS mRNA 300643 301026 1 + . ID=LTnewLM_250013900.1;Parent=LTnewLM_250013900 LTnewLM_25 AUGUSTUS CDS 300643 301026 1 + 0 ID=LTnewLM_250013900.1:CDS:1;Parent=LTnewLM_250013900.1 ### LTnewLM_25 . polypeptide 300643 301026 . + . ID=LTnewLM_250013900.1:pep;Derives_from=LTnewLM_250013900.1;orthologous_to=LmjF.25.0820_mRNA;ortholog_cluster=OG0002833;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01920;Ontology_term=GO:0051082,GO:0006457,GO:0016272 LTnewLM_25 Pfam protein_match 300697 301002 . + . Parent=LTnewLM_250013900.1:pep;Name=PF01920;signature_desc=Prefoldin subunit;Ontology_term=GO:0051082,GO:0006457,GO:0016272 ### LTnewLM_25 Liftoff gene 304071 307268 . + . ID=LTnewLM_250014000;coverage=1.0;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0830_0 LTnewLM_25 Liftoff mRNA 304071 307268 . + . ID=LTnewLM_250014000.1;Parent=LTnewLM_250014000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 304071 307268 . + 0 ID=LTnewLM_250014000.1:CDS:1;Parent=LTnewLM_250014000.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 304071 307268 . + . ID=LTnewLM_250014000.1:pep;Derives_from=LTnewLM_250014000.1;orthologous_to=LmjF.25.0830_mRNA;ortholog_cluster=OG0002834;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 309444 310691 1 + . ID=LTnewLM_250014100 LTnewLM_25 AUGUSTUS mRNA 309444 310691 1 + . ID=LTnewLM_250014100.1;Parent=LTnewLM_250014100 LTnewLM_25 AUGUSTUS CDS 309444 310691 1 + 0 ID=LTnewLM_250014100.1:CDS:1;Parent=LTnewLM_250014100.1 ### LTnewLM_25 . polypeptide 309444 310691 . + . ID=LTnewLM_250014100.1:pep;Derives_from=LTnewLM_250014100.1;orthologous_to=LmjF.25.0840_mRNA;ortholog_cluster=OG0002835;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 313359 316797 . + . ID=LTnewLM_250014200:pseudogene;coverage=0.996;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0850_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 313359 316797 . + . ID=LTnewLM_250014200.1;Parent=LTnewLM_250014200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 313359 316797 . + . ID=LTnewLM_250014200.1:pseudogenic_exon:1;Parent=LTnewLM_250014200.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 313359 316797 . + . ID=LTnewLM_250014200.1:pep;Derives_from=LTnewLM_250014200.1;orthologous_to=LmjF.25.0850_mRNA;ortholog_cluster=OG0007540;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 317581 320964 1 + . ID=LTnewLM_250014300 LTnewLM_25 AUGUSTUS mRNA 317581 320964 1 + . ID=LTnewLM_250014300.1;Parent=LTnewLM_250014300 LTnewLM_25 AUGUSTUS CDS 317581 320964 1 + 0 ID=LTnewLM_250014300.1:CDS:1;Parent=LTnewLM_250014300.1 ### LTnewLM_25 . polypeptide 317581 320964 . + . ID=LTnewLM_250014300.1:pep;Derives_from=LTnewLM_250014300.1;orthologous_to=LmjF.25.0860_mRNA;ortholog_cluster=OG0002836;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 325585 326463 1 + . ID=LTnewLM_250014400 LTnewLM_25 AUGUSTUS mRNA 325585 326463 1 + . ID=LTnewLM_250014400.1;Parent=LTnewLM_250014400 LTnewLM_25 AUGUSTUS CDS 325585 326463 1 + 0 ID=LTnewLM_250014400.1:CDS:1;Parent=LTnewLM_250014400.1 ### LTnewLM_25 . polypeptide 325585 326463 . + . ID=LTnewLM_250014400.1:pep;Derives_from=LTnewLM_250014400.1;orthologous_to=LmjF.25.0870_mRNA;ortholog_cluster=OG0002837;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 327454 327784 . + . ID=LTnewLM_250014500.1:pep;Derives_from=LTnewLM_250014500.1;orthologous_to=LTnewLM_250014500.2,LmjF.25.0880_mRNA;ortholog_cluster=OG0000394;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 327454 331866 1.24 + . ID=LTnewLM_250014500 LTnewLM_25 AUGUSTUS mRNA 327454 327784 0.33 + . ID=LTnewLM_250014500.1;Parent=LTnewLM_250014500 LTnewLM_25 AUGUSTUS CDS 327454 327661 0.35 + 0 ID=LTnewLM_250014500.1:CDS:1;Parent=LTnewLM_250014500.1 LTnewLM_25 AUGUSTUS CDS 327708 327784 0.61 + 2 ID=LTnewLM_250014500.1:CDS:2;Parent=LTnewLM_250014500.1 LTnewLM_25 AUGUSTUS mRNA 327454 331866 0.91 + . ID=LTnewLM_250014500.2;Parent=LTnewLM_250014500 LTnewLM_25 AUGUSTUS CDS 327454 331866 0.91 + 0 ID=LTnewLM_250014500.2:CDS:1;Parent=LTnewLM_250014500.2 ### LTnewLM_25 . polypeptide 327454 331866 . + . ID=LTnewLM_250014500.2:pep;Derives_from=LTnewLM_250014500.2;orthologous_to=LTnewLM_250014500.1,LmjF.25.0880_mRNA;ortholog_cluster=OG0000394;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 327898 328071 . + . Parent=LTnewLM_250014500.2:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 327964 328143 . + . Parent=LTnewLM_250014500.2:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 332624 333394 1 + . ID=LTnewLM_250014600 LTnewLM_25 AUGUSTUS mRNA 332624 333394 1 + . ID=LTnewLM_250014600.1;Parent=LTnewLM_250014600 LTnewLM_25 AUGUSTUS CDS 332624 333394 1 + 0 ID=LTnewLM_250014600.1:CDS:1;Parent=LTnewLM_250014600.1 ### LTnewLM_25 . polypeptide 332624 333394 . + . ID=LTnewLM_250014600.1:pep;Derives_from=LTnewLM_250014600.1;orthologous_to=LmjF.25.0890_mRNA;ortholog_cluster=OG0002838;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 334149 335171 1 + . ID=LTnewLM_250014700 LTnewLM_25 AUGUSTUS mRNA 334149 335171 1 + . ID=LTnewLM_250014700.1;Parent=LTnewLM_250014700 LTnewLM_25 AUGUSTUS CDS 334149 335171 1 + 0 ID=LTnewLM_250014700.1:CDS:1;Parent=LTnewLM_250014700.1 ### LTnewLM_25 . polypeptide 334149 335171 . + . ID=LTnewLM_250014700.1:pep;Derives_from=LTnewLM_250014700.1;orthologous_to=LmjF.25.0900_mRNA;ortholog_cluster=OG0002839;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 335839 336372 1 + . ID=LTnewLM_250014800 LTnewLM_25 AUGUSTUS mRNA 335839 336372 1 + . ID=LTnewLM_250014800.1;Parent=LTnewLM_250014800 LTnewLM_25 AUGUSTUS CDS 335839 336372 1 + 0 ID=LTnewLM_250014800.1:CDS:1;Parent=LTnewLM_250014800.1 ### LTnewLM_25 . polypeptide 335839 336372 . + . ID=LTnewLM_250014800.1:pep;Derives_from=LTnewLM_250014800.1;orthologous_to=LmjF.25.0910_mRNA;ortholog_cluster=OG0002840;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_25 Pfam protein_match 335890 336360 . + . Parent=LTnewLM_250014800.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_25 . pseudogene 338762 341347 . + . ID=LTnewLM_250014900:pseudogene;coverage=0.988;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0920_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 338762 341347 . + . ID=LTnewLM_250014900.1;Parent=LTnewLM_250014900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 338762 341347 . + . ID=LTnewLM_250014900.1:pseudogenic_exon:1;Parent=LTnewLM_250014900.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 338762 341347 . + . ID=LTnewLM_250014900.1:pep;Derives_from=LTnewLM_250014900.1;orthologous_to=LmjF.25.0920_mRNA;ortholog_cluster=OG0007541;product=term%3DHistone RNA hairpin-binding protein RNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15247;Ontology_term=GO:0003723 LTnewLM_25 Pfam protein_match 339248 339451 . + . Parent=LTnewLM_250014900.1:pep;Name=PF15247;signature_desc=Histone RNA hairpin-binding protein RNA-binding domain;Ontology_term=GO:0003723 ### LTnewLM_25 AUGUSTUS gene 343184 343972 1 + . ID=LTnewLM_250015000 LTnewLM_25 AUGUSTUS mRNA 343184 343972 1 + . ID=LTnewLM_250015000.1;Parent=LTnewLM_250015000 LTnewLM_25 AUGUSTUS CDS 343184 343972 1 + 0 ID=LTnewLM_250015000.1:CDS:1;Parent=LTnewLM_250015000.1 ### LTnewLM_25 . polypeptide 343184 343972 . + . ID=LTnewLM_250015000.1:pep;Derives_from=LTnewLM_250015000.1;orthologous_to=LmjF.25.0930_mRNA;ortholog_cluster=OG0002841;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637|Pfam:PF12796|Pfam:PF13606|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 343307 343456 . + . Parent=LTnewLM_250015000.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_25 Pfam protein_match 343610 343789 . + . Parent=LTnewLM_250015000.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_25 Pfam protein_match 343625 343705 . + . Parent=LTnewLM_250015000.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 343625 343711 . + . Parent=LTnewLM_250015000.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 343625 343786 . + . Parent=LTnewLM_250015000.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_25 AUGUSTUS gene 344579 346351 1 + . ID=LTnewLM_250015100 LTnewLM_25 AUGUSTUS mRNA 344579 346351 1 + . ID=LTnewLM_250015100.1;Parent=LTnewLM_250015100 LTnewLM_25 AUGUSTUS CDS 344579 346351 1 + 0 ID=LTnewLM_250015100.1:CDS:1;Parent=LTnewLM_250015100.1 ### LTnewLM_25 . polypeptide 344579 346351 . + . ID=LTnewLM_250015100.1:pep;Derives_from=LTnewLM_250015100.1;orthologous_to=LmjF.25.0940_mRNA;ortholog_cluster=OG0002842;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 346926 348386 . + . ID=LTnewLM_250015200:pseudogene;coverage=0.982;sequence_ID=0.902;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0950_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 346926 348386 . + . ID=LTnewLM_250015200.1;Parent=LTnewLM_250015200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 346926 348386 . + . ID=LTnewLM_250015200.1:pseudogenic_exon:1;Parent=LTnewLM_250015200.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 346926 348386 . + . ID=LTnewLM_250015200.1:pep;Derives_from=LTnewLM_250015200.1;orthologous_to=LmjF.25.0950_mRNA;ortholog_cluster=OG0007542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 349361 350704 1 + . ID=LTnewLM_250015300 LTnewLM_25 AUGUSTUS mRNA 349361 350704 1 + . ID=LTnewLM_250015300.1;Parent=LTnewLM_250015300 LTnewLM_25 AUGUSTUS CDS 349361 350704 1 + 0 ID=LTnewLM_250015300.1:CDS:1;Parent=LTnewLM_250015300.1 ### LTnewLM_25 . polypeptide 349361 350704 . + . ID=LTnewLM_250015300.1:pep;Derives_from=LTnewLM_250015300.1;orthologous_to=LmjF.25.0960_mRNA;ortholog_cluster=OG0002843;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_25 Pfam protein_match 349370 350005 . + . Parent=LTnewLM_250015300.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_25 Pfam protein_match 350156 350533 . + . Parent=LTnewLM_250015300.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_25 . pseudogene 351978 355688 . + . ID=LTnewLM_250015400:pseudogene;coverage=0.999;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.0970_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 351978 355688 . + . ID=LTnewLM_250015400.1;Parent=LTnewLM_250015400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 351978 355688 . + . ID=LTnewLM_250015400.1:pseudogenic_exon:1;Parent=LTnewLM_250015400.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 351978 355688 . + . ID=LTnewLM_250015400.1:pep;Derives_from=LTnewLM_250015400.1;orthologous_to=LmjF.25.0970_mRNA;ortholog_cluster=OG0007543;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 356774 370882 1 + . ID=LTnewLM_250015500 LTnewLM_25 AUGUSTUS mRNA 356774 370882 1 + . ID=LTnewLM_250015500.1;Parent=LTnewLM_250015500 LTnewLM_25 AUGUSTUS CDS 356774 370882 1 + 0 ID=LTnewLM_250015500.1:CDS:1;Parent=LTnewLM_250015500.1 ### LTnewLM_25 . polypeptide 356774 370882 . + . ID=LTnewLM_250015500.1:pep;Derives_from=LTnewLM_250015500.1;orthologous_to=LmjF.25.0980_mRNA;ortholog_cluster=OG0002844;product=term%3DDynein heavy chain%2C N-terminal region 1/Dynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08385|Pfam:PF08393|Pfam:PF12774|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0030286,GO:0007018,GO:0003777 LTnewLM_25 Pfam protein_match 357566 359290 . + . Parent=LTnewLM_250015500.1:pep;Name=PF08385;signature_desc=Dynein heavy chain%2C N-terminal region 1 LTnewLM_25 Pfam protein_match 360884 362113 . + . Parent=LTnewLM_250015500.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_25 Pfam protein_match 362549 363529 . + . Parent=LTnewLM_250015500.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_25 Pfam protein_match 364103 364420 . + . Parent=LTnewLM_250015500.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_25 Pfam protein_match 364454 364990 . + . Parent=LTnewLM_250015500.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_25 Pfam protein_match 365102 365377 . + . Parent=LTnewLM_250015500.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_25 Pfam protein_match 365627 366409 . + . Parent=LTnewLM_250015500.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_25 Pfam protein_match 366455 367513 . + . Parent=LTnewLM_250015500.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_25 Pfam protein_match 367595 368254 . + . Parent=LTnewLM_250015500.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_25 Pfam protein_match 368993 369346 . + . Parent=LTnewLM_250015500.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_25 Pfam protein_match 369440 369886 . + . Parent=LTnewLM_250015500.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_25 Pfam protein_match 369911 370864 . + . Parent=LTnewLM_250015500.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_25 AUGUSTUS gene 374215 374703 1 + . ID=LTnewLM_250015600 LTnewLM_25 AUGUSTUS mRNA 374215 374703 1 + . ID=LTnewLM_250015600.1;Parent=LTnewLM_250015600 LTnewLM_25 AUGUSTUS CDS 374215 374703 1 + 0 ID=LTnewLM_250015600.1:CDS:1;Parent=LTnewLM_250015600.1 ### LTnewLM_25 . polypeptide 374215 374703 . + . ID=LTnewLM_250015600.1:pep;Derives_from=LTnewLM_250015600.1;orthologous_to=LmjF.25.0990_mRNA;ortholog_cluster=OG0002845;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_25 Pfam protein_match 374347 374544 . + . Parent=LTnewLM_250015600.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_25 AUGUSTUS gene 375841 379890 1 + . ID=LTnewLM_250015700 LTnewLM_25 AUGUSTUS mRNA 375841 379890 1 + . ID=LTnewLM_250015700.1;Parent=LTnewLM_250015700 LTnewLM_25 AUGUSTUS CDS 375841 379890 1 + 0 ID=LTnewLM_250015700.1:CDS:1;Parent=LTnewLM_250015700.1 ### LTnewLM_25 . polypeptide 375841 379890 . + . ID=LTnewLM_250015700.1:pep;Derives_from=LTnewLM_250015700.1;orthologous_to=LmjF.25.1000_mRNA;ortholog_cluster=OG0002846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 382384 383679 1 + . ID=LTnewLM_250015800 LTnewLM_25 AUGUSTUS mRNA 382384 383679 1 + . ID=LTnewLM_250015800.1;Parent=LTnewLM_250015800 LTnewLM_25 AUGUSTUS CDS 382384 383679 1 + 0 ID=LTnewLM_250015800.1:CDS:1;Parent=LTnewLM_250015800.1 ### LTnewLM_25 . polypeptide 382384 383679 . + . ID=LTnewLM_250015800.1:pep;Derives_from=LTnewLM_250015800.1;orthologous_to=LmjF.25.1010_mRNA;ortholog_cluster=OG0002847;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03171;Ontology_term=GO:0016706,GO:0016491,GO:0055114 LTnewLM_25 Pfam protein_match 383308 383568 . + . Parent=LTnewLM_250015800.1:pep;Name=PF03171;signature_desc=2OG-Fe(II) oxygenase superfamily;Ontology_term=GO:0016491,GO:0016706,GO:0055114 ### LTnewLM_25 AUGUSTUS gene 384809 385018 1 + . ID=LTnewLM_250015900 LTnewLM_25 AUGUSTUS mRNA 384809 385018 1 + . ID=LTnewLM_250015900.1;Parent=LTnewLM_250015900 LTnewLM_25 AUGUSTUS CDS 384809 385018 1 + 0 ID=LTnewLM_250015900.1:CDS:1;Parent=LTnewLM_250015900.1 ### LTnewLM_25 . polypeptide 384809 385018 . + . ID=LTnewLM_250015900.1:pep;Derives_from=LTnewLM_250015900.1;orthologous_to=LmjF.25.1015_mRNA;ortholog_cluster=OG0002848;product=term%3DSecE/Sec61-gamma subunits of protein translocation complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00584;Ontology_term=GO:0016020,GO:0006886,GO:0006605 LTnewLM_25 Pfam protein_match 384848 385003 . + . Parent=LTnewLM_250015900.1:pep;Name=PF00584;signature_desc=SecE/Sec61-gamma subunits of protein translocation complex;Ontology_term=GO:0006605,GO:0006886,GO:0016020 ### LTnewLM_25 AUGUSTUS gene 386608 387900 1 + . ID=LTnewLM_250016000 LTnewLM_25 AUGUSTUS mRNA 386608 387900 1 + . ID=LTnewLM_250016000.1;Parent=LTnewLM_250016000 LTnewLM_25 AUGUSTUS CDS 386608 387900 1 + 0 ID=LTnewLM_250016000.1:CDS:1;Parent=LTnewLM_250016000.1 ### LTnewLM_25 . polypeptide 386608 387900 . + . ID=LTnewLM_250016000.1:pep;Derives_from=LTnewLM_250016000.1;orthologous_to=LmjF.25.1020_mRNA;ortholog_cluster=OG0002849;product=term%3DNAD binding domain of 6-phosphogluconate dehydrogenase/NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03446|Pfam:PF14833;Ontology_term=GO:0055114,GO:0051287,GO:0004616,GO:0006098 LTnewLM_25 Pfam protein_match 386632 387144 . + . Parent=LTnewLM_250016000.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 LTnewLM_25 Pfam protein_match 387154 387330 . + . Parent=LTnewLM_250016000.1:pep;Name=PF14833;signature_desc=NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase;Ontology_term=GO:0051287 ### LTnewLM_25 AUGUSTUS gene 388676 388987 1 + . ID=LTnewLM_250016100 LTnewLM_25 AUGUSTUS mRNA 388676 388987 1 + . ID=LTnewLM_250016100.1;Parent=LTnewLM_250016100 LTnewLM_25 AUGUSTUS CDS 388676 388987 1 + 0 ID=LTnewLM_250016100.1:CDS:1;Parent=LTnewLM_250016100.1 ### LTnewLM_25 . polypeptide 388676 388987 . + . ID=LTnewLM_250016100.1:pep;Derives_from=LTnewLM_250016100.1;product=term%3Dhypothetical protein ### LTnewLM_25 . pseudogene 390182 392698 . + . ID=LTnewLM_250016200:pseudogene;coverage=1.0;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.1030_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 390182 392698 . + . ID=LTnewLM_250016200.1;Parent=LTnewLM_250016200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 390182 392698 . + . ID=LTnewLM_250016200.1:pseudogenic_exon:1;Parent=LTnewLM_250016200.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 390182 392698 . + . ID=LTnewLM_250016200.1:pep;Derives_from=LTnewLM_250016200.1;orthologous_to=LmjF.25.1030_mRNA;ortholog_cluster=OG0007544;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 393998 396901 1 + . ID=LTnewLM_250016300 LTnewLM_25 AUGUSTUS mRNA 393998 396901 1 + . ID=LTnewLM_250016300.1;Parent=LTnewLM_250016300 LTnewLM_25 AUGUSTUS CDS 393998 396901 1 + 0 ID=LTnewLM_250016300.1:CDS:1;Parent=LTnewLM_250016300.1 ### LTnewLM_25 . polypeptide 393998 396901 . + . ID=LTnewLM_250016300.1:pep;Derives_from=LTnewLM_250016300.1;orthologous_to=LmjF.25.1040_mRNA;ortholog_cluster=OG0002850;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 397891 398460 1 + . ID=LTnewLM_250016400 LTnewLM_25 AUGUSTUS mRNA 397891 398460 1 + . ID=LTnewLM_250016400.1;Parent=LTnewLM_250016400 LTnewLM_25 AUGUSTUS CDS 397891 398460 1 + 0 ID=LTnewLM_250016400.1:CDS:1;Parent=LTnewLM_250016400.1 ### LTnewLM_25 . polypeptide 397891 398460 . + . ID=LTnewLM_250016400.1:pep;Derives_from=LTnewLM_250016400.1;orthologous_to=LmjF.25.1050_mRNA;ortholog_cluster=OG0002851;product=term%3DFrataxin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01491;Ontology_term=GO:0008199,GO:0016226 LTnewLM_25 Pfam protein_match 398119 398442 . + . Parent=LTnewLM_250016400.1:pep;Name=PF01491;signature_desc=Frataxin-like domain;Ontology_term=GO:0008199,GO:0016226 ### LTnewLM_25 . pseudogene 399930 402492 . + . ID=LTnewLM_250016500:pseudogene;coverage=0.991;sequence_ID=0.801;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.1060_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 399930 402492 . + . ID=LTnewLM_250016500.1;Parent=LTnewLM_250016500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 399930 402492 . + . ID=LTnewLM_250016500.1:pseudogenic_exon:1;Parent=LTnewLM_250016500.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 399930 402492 . + . ID=LTnewLM_250016500.1:pep;Derives_from=LTnewLM_250016500.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 406042 408618 1 + . ID=LTnewLM_250016600 LTnewLM_25 AUGUSTUS mRNA 406042 408618 1 + . ID=LTnewLM_250016600.1;Parent=LTnewLM_250016600 LTnewLM_25 AUGUSTUS CDS 406042 408618 1 + 0 ID=LTnewLM_250016600.1:CDS:1;Parent=LTnewLM_250016600.1 ### LTnewLM_25 . polypeptide 406042 408618 . + . ID=LTnewLM_250016600.1:pep;Derives_from=LTnewLM_250016600.1;orthologous_to=LmjF.25.1070_mRNA;ortholog_cluster=OG0002852;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 410649 411974 1 + . ID=LTnewLM_250016700 LTnewLM_25 AUGUSTUS mRNA 410649 411974 1 + . ID=LTnewLM_250016700.1;Parent=LTnewLM_250016700 LTnewLM_25 AUGUSTUS CDS 410649 411974 1 + 0 ID=LTnewLM_250016700.1:CDS:1;Parent=LTnewLM_250016700.1 ### LTnewLM_25 . polypeptide 410649 411974 . + . ID=LTnewLM_250016700.1:pep;Derives_from=LTnewLM_250016700.1;orthologous_to=LmjF.25.1080_mRNA;ortholog_cluster=OG0002853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 414482 415723 1 - . ID=LTnewLM_250016800 LTnewLM_25 AUGUSTUS mRNA 414482 415723 1 - . ID=LTnewLM_250016800.1;Parent=LTnewLM_250016800 LTnewLM_25 AUGUSTUS CDS 414482 415723 1 - 0 ID=LTnewLM_250016800.1:CDS:1;Parent=LTnewLM_250016800.1 ### LTnewLM_25 . polypeptide 414482 415723 . - . ID=LTnewLM_250016800.1:pep;Derives_from=LTnewLM_250016800.1;orthologous_to=LmjF.25.1090_mRNA;ortholog_cluster=OG0002854;product=term%3DCorA-like Mg2+ transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01544;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_25 Pfam protein_match 414557 415558 . - . Parent=LTnewLM_250016800.1:pep;Name=PF01544;signature_desc=CorA-like Mg2+ transporter protein;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_25 AUGUSTUS gene 417748 418938 1 - . ID=LTnewLM_250016900 LTnewLM_25 AUGUSTUS mRNA 417748 418938 1 - . ID=LTnewLM_250016900.1;Parent=LTnewLM_250016900 LTnewLM_25 AUGUSTUS CDS 417748 418938 1 - 0 ID=LTnewLM_250016900.1:CDS:1;Parent=LTnewLM_250016900.1 ### LTnewLM_25 . polypeptide 417748 418938 . - . ID=LTnewLM_250016900.1:pep;Derives_from=LTnewLM_250016900.1;orthologous_to=LmjF.25.1100_mRNA;ortholog_cluster=OG0002855;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_25 Pfam protein_match 417802 418446 . - . Parent=LTnewLM_250016900.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_25 Pfam protein_match 418186 418377 . - . Parent=LTnewLM_250016900.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 LTnewLM_25 Pfam protein_match 418582 418779 . - . Parent=LTnewLM_250016900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_25 Liftoff gene 420318 439955 . - . ID=LTnewLM_250017000;coverage=0.998;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.1110_0 LTnewLM_25 Liftoff mRNA 420318 439955 . - . ID=LTnewLM_250017000.1;Parent=LTnewLM_250017000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 420318 439955 . - 0 ID=LTnewLM_250017000.1:CDS:1;Parent=LTnewLM_250017000.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 420318 439955 . - . ID=LTnewLM_250017000.1:pep;Derives_from=LTnewLM_250017000.1;orthologous_to=LmjF.25.1110_mRNA;ortholog_cluster=OG0002856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 443314 444813 1 - . ID=LTnewLM_250017100 LTnewLM_25 AUGUSTUS mRNA 443314 444813 1 - . ID=LTnewLM_250017100.1;Parent=LTnewLM_250017100 LTnewLM_25 AUGUSTUS CDS 443314 444813 1 - 0 ID=LTnewLM_250017100.1:CDS:1;Parent=LTnewLM_250017100.1 ### LTnewLM_25 . polypeptide 443314 444813 . - . ID=LTnewLM_250017100.1:pep;Derives_from=LTnewLM_250017100.1;orthologous_to=LmjF.25.1120_mRNA;ortholog_cluster=OG0002857;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_25 Pfam protein_match 443353 444723 . - . Parent=LTnewLM_250017100.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_25 AUGUSTUS gene 447080 447577 1 - . ID=LTnewLM_250017200 LTnewLM_25 AUGUSTUS mRNA 447080 447577 1 - . ID=LTnewLM_250017200.1;Parent=LTnewLM_250017200 LTnewLM_25 AUGUSTUS CDS 447080 447577 1 - 0 ID=LTnewLM_250017200.1:CDS:1;Parent=LTnewLM_250017200.1 ### LTnewLM_25 . polypeptide 447080 447577 . - . ID=LTnewLM_250017200.1:pep;Derives_from=LTnewLM_250017200.1;orthologous_to=LmjF.25.1130_mRNA;ortholog_cluster=OG0002858;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 449082 450719 1 - . ID=LTnewLM_250017300 LTnewLM_25 AUGUSTUS mRNA 449082 450719 1 - . ID=LTnewLM_250017300.1;Parent=LTnewLM_250017300 LTnewLM_25 AUGUSTUS CDS 449082 450719 1 - 0 ID=LTnewLM_250017300.1:CDS:1;Parent=LTnewLM_250017300.1 ### LTnewLM_25 . polypeptide 449082 450719 . - . ID=LTnewLM_250017300.1:pep;Derives_from=LTnewLM_250017300.1;orthologous_to=LmjF.25.1140_mRNA;ortholog_cluster=OG0002859;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 451644 451954 0.98 - . ID=LTnewLM_250017400 LTnewLM_25 AUGUSTUS mRNA 451644 451954 0.98 - . ID=LTnewLM_250017400.1;Parent=LTnewLM_250017400 LTnewLM_25 AUGUSTUS CDS 451644 451899 0.98 - 1 ID=LTnewLM_250017400.1:CDS:1;Parent=LTnewLM_250017400.1 LTnewLM_25 AUGUSTUS CDS 451947 451954 0.98 - 0 ID=LTnewLM_250017400.1:CDS:2;Parent=LTnewLM_250017400.1 ### LTnewLM_25 . polypeptide 451644 451954 . - . ID=LTnewLM_250017400.1:pep;Derives_from=LTnewLM_250017400.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 453390 453911 0.99 - . ID=LTnewLM_250017500 LTnewLM_25 AUGUSTUS mRNA 453390 453911 0.99 - . ID=LTnewLM_250017500.1;Parent=LTnewLM_250017500 LTnewLM_25 AUGUSTUS CDS 453390 453911 0.99 - 0 ID=LTnewLM_250017500.1:CDS:1;Parent=LTnewLM_250017500.1 ### LTnewLM_25 . polypeptide 453390 453911 . - . ID=LTnewLM_250017500.1:pep;Derives_from=LTnewLM_250017500.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 454112 454852 1 - . ID=LTnewLM_250017600 LTnewLM_25 AUGUSTUS mRNA 454112 454852 1 - . ID=LTnewLM_250017600.1;Parent=LTnewLM_250017600 LTnewLM_25 AUGUSTUS CDS 454112 454852 1 - 0 ID=LTnewLM_250017600.1:CDS:1;Parent=LTnewLM_250017600.1 ### LTnewLM_25 . polypeptide 454112 454852 . - . ID=LTnewLM_250017600.1:pep;Derives_from=LTnewLM_250017600.1;orthologous_to=LmjF.25.1150_mRNA;ortholog_cluster=OG0002860;product=term%3DGNAT acetyltransferase%2C Mec-17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05301;Ontology_term=GO:0019799,GO:0071929 LTnewLM_25 Pfam protein_match 454250 454711 . - . Parent=LTnewLM_250017600.1:pep;Name=PF05301;signature_desc=GNAT acetyltransferase%2C Mec-17;Ontology_term=GO:0019799,GO:0071929 ### LTnewLM_25 AUGUSTUS gene 456056 457498 1 - . ID=LTnewLM_250017700 LTnewLM_25 AUGUSTUS mRNA 456056 457498 1 - . ID=LTnewLM_250017700.1;Parent=LTnewLM_250017700 LTnewLM_25 AUGUSTUS CDS 456056 457498 1 - 0 ID=LTnewLM_250017700.1:CDS:1;Parent=LTnewLM_250017700.1 ### LTnewLM_25 . polypeptide 456056 457498 . - . ID=LTnewLM_250017700.1:pep;Derives_from=LTnewLM_250017700.1;orthologous_to=LmjF.25.1160_mRNA;ortholog_cluster=OG0002861;product=term%3DLMBR1-like membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04791 LTnewLM_25 Pfam protein_match 456137 456595 . - . Parent=LTnewLM_250017700.1:pep;Name=PF04791;signature_desc=LMBR1-like membrane protein LTnewLM_25 Pfam protein_match 456749 457474 . - . Parent=LTnewLM_250017700.1:pep;Name=PF04791;signature_desc=LMBR1-like membrane protein ### LTnewLM_25 AUGUSTUS gene 459498 461074 1 - . ID=LTnewLM_250017800 LTnewLM_25 AUGUSTUS mRNA 459498 461074 1 - . ID=LTnewLM_250017800.1;Parent=LTnewLM_250017800 LTnewLM_25 AUGUSTUS CDS 459498 460048 1 - 2 ID=LTnewLM_250017800.1:CDS:1;Parent=LTnewLM_250017800.1 LTnewLM_25 AUGUSTUS CDS 460120 461074 1 - 0 ID=LTnewLM_250017800.1:CDS:2;Parent=LTnewLM_250017800.1 ### LTnewLM_25 . polypeptide 459498 461074 . - . ID=LTnewLM_250017800.1:pep;Derives_from=LTnewLM_250017800.1;orthologous_to=LTnewLM_250017900.1,LmjF.25.1170_mRNA,LmjF.25.1180_mRNA;ortholog_cluster=OG0000179;product=term%3DATP synthase alpha/beta family%2C beta-barrel domain/ATP synthase alpha/beta family%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02874|Pfam:PF00006;Ontology_term=GO:0046034,GO:0005524,GO:0015992 LTnewLM_25 Pfam protein_match 460121 460579 . - . Parent=LTnewLM_250017800.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 LTnewLM_25 Pfam protein_match 460751 460957 . - . Parent=LTnewLM_250017800.1:pep;Name=PF02874;signature_desc=ATP synthase alpha/beta family%2C beta-barrel domain;Ontology_term=GO:0015992,GO:0046034 ### LTnewLM_25 AUGUSTUS gene 462850 464428 0.99 - . ID=LTnewLM_250017900 LTnewLM_25 AUGUSTUS mRNA 462850 464428 0.99 - . ID=LTnewLM_250017900.1;Parent=LTnewLM_250017900 LTnewLM_25 AUGUSTUS CDS 462850 464070 0.99 - 0 ID=LTnewLM_250017900.1:CDS:1;Parent=LTnewLM_250017900.1 LTnewLM_25 AUGUSTUS CDS 464123 464428 1 - 0 ID=LTnewLM_250017900.1:CDS:2;Parent=LTnewLM_250017900.1 ### LTnewLM_25 . polypeptide 462850 464428 . - . ID=LTnewLM_250017900.1:pep;Derives_from=LTnewLM_250017900.1;orthologous_to=LTnewLM_250017800.1,LmjF.25.1170_mRNA,LmjF.25.1180_mRNA;ortholog_cluster=OG0000179;product=term%3DATP synthase alpha/beta family%2C beta-barrel domain/ATP synthase alpha/beta family%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02874|Pfam:PF00006;Ontology_term=GO:0046034,GO:0005524,GO:0015992 LTnewLM_25 Pfam protein_match 463331 463984 . - . Parent=LTnewLM_250017900.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 LTnewLM_25 Pfam protein_match 464168 464311 . - . Parent=LTnewLM_250017900.1:pep;Name=PF02874;signature_desc=ATP synthase alpha/beta family%2C beta-barrel domain;Ontology_term=GO:0015992,GO:0046034 ### LTnewLM_25 AUGUSTUS gene 465337 465699 1 - . ID=LTnewLM_250018000 LTnewLM_25 AUGUSTUS mRNA 465337 465699 1 - . ID=LTnewLM_250018000.1;Parent=LTnewLM_250018000 LTnewLM_25 AUGUSTUS CDS 465337 465699 1 - 0 ID=LTnewLM_250018000.1:CDS:1;Parent=LTnewLM_250018000.1 ### LTnewLM_25 . polypeptide 465337 465699 . - . ID=LTnewLM_250018000.1:pep;Derives_from=LTnewLM_250018000.1;orthologous_to=LTnewLM_340009700.1,LmjF.25.1190_mRNA;ortholog_cluster=OG0000395;product=term%3DS25 ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03297 LTnewLM_25 Pfam protein_match 465394 465684 . - . Parent=LTnewLM_250018000.1:pep;Name=PF03297;signature_desc=S25 ribosomal protein ### LTnewLM_25 AUGUSTUS gene 466379 468901 1 - . ID=LTnewLM_250018100 LTnewLM_25 AUGUSTUS mRNA 466379 468901 1 - . ID=LTnewLM_250018100.1;Parent=LTnewLM_250018100 LTnewLM_25 AUGUSTUS CDS 466379 468901 1 - 0 ID=LTnewLM_250018100.1:CDS:1;Parent=LTnewLM_250018100.1 ### LTnewLM_25 . polypeptide 466379 468901 . - . ID=LTnewLM_250018100.1:pep;Derives_from=LTnewLM_250018100.1;orthologous_to=LmjF.25.1200_mRNA;ortholog_cluster=OG0002862;product=term%3DC-5 cytosine-specific DNA methylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00145 LTnewLM_25 Pfam protein_match 466553 467614 . - . Parent=LTnewLM_250018100.1:pep;Name=PF00145;signature_desc=C-5 cytosine-specific DNA methylase LTnewLM_25 Pfam protein_match 467828 467953 . - . Parent=LTnewLM_250018100.1:pep;Name=PF00145;signature_desc=C-5 cytosine-specific DNA methylase ### LTnewLM_25 AUGUSTUS gene 470170 473376 1 - . ID=LTnewLM_250018200 LTnewLM_25 AUGUSTUS mRNA 470170 473376 1 - . ID=LTnewLM_250018200.1;Parent=LTnewLM_250018200 LTnewLM_25 AUGUSTUS CDS 470170 473376 1 - 0 ID=LTnewLM_250018200.1:CDS:1;Parent=LTnewLM_250018200.1 ### LTnewLM_25 . polypeptide 470170 473376 . - . ID=LTnewLM_250018200.1:pep;Derives_from=LTnewLM_250018200.1;orthologous_to=LmjF.25.1210_mRNA;ortholog_cluster=OG0002863;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 473943 475775 1 - . ID=LTnewLM_250018300 LTnewLM_25 AUGUSTUS mRNA 473943 475775 1 - . ID=LTnewLM_250018300.1;Parent=LTnewLM_250018300 LTnewLM_25 AUGUSTUS CDS 473943 475775 1 - 0 ID=LTnewLM_250018300.1:CDS:1;Parent=LTnewLM_250018300.1 ### LTnewLM_25 . polypeptide 473943 475775 . - . ID=LTnewLM_250018300.1:pep;Derives_from=LTnewLM_250018300.1;orthologous_to=LmjF.25.1220_mRNA;ortholog_cluster=OG0002864;product=term%3DNuclear cap binding complex subunit CBP66%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19043 LTnewLM_25 Pfam protein_match 473955 475772 . - . Parent=LTnewLM_250018300.1:pep;Name=PF19043;signature_desc=Nuclear cap binding complex subunit CBP66 ### LTnewLM_25 AUGUSTUS gene 476771 482995 1 - . ID=LTnewLM_250018400 LTnewLM_25 AUGUSTUS mRNA 476771 482995 1 - . ID=LTnewLM_250018400.1;Parent=LTnewLM_250018400 LTnewLM_25 AUGUSTUS CDS 476771 482995 1 - 0 ID=LTnewLM_250018400.1:CDS:1;Parent=LTnewLM_250018400.1 ### LTnewLM_25 . polypeptide 476771 482995 . - . ID=LTnewLM_250018400.1:pep;Derives_from=LTnewLM_250018400.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 483645 489305 1 - . ID=LTnewLM_250018500 LTnewLM_25 AUGUSTUS mRNA 483645 489305 1 - . ID=LTnewLM_250018500.1;Parent=LTnewLM_250018500 LTnewLM_25 AUGUSTUS CDS 483645 489305 1 - 0 ID=LTnewLM_250018500.1:CDS:1;Parent=LTnewLM_250018500.1 ### LTnewLM_25 . polypeptide 483645 489305 . - . ID=LTnewLM_250018500.1:pep;Derives_from=LTnewLM_250018500.1;orthologous_to=LmjF.25.1250_mRNA,LmjF.25.1260_mRNA;ortholog_cluster=OG0000396;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 490225 497345 . - . ID=LTnewLM_250018600:pseudogene;coverage=0.996;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.1260_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 490225 497345 . - . ID=LTnewLM_250018600.1;Parent=LTnewLM_250018600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 490225 497345 . - . ID=LTnewLM_250018600.1:pseudogenic_exon:1;Parent=LTnewLM_250018600.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 490225 497345 . - . ID=LTnewLM_250018600.1:pep;Derives_from=LTnewLM_250018600.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 499587 501116 1 - . ID=LTnewLM_250018700 LTnewLM_25 AUGUSTUS mRNA 499587 501116 1 - . ID=LTnewLM_250018700.1;Parent=LTnewLM_250018700 LTnewLM_25 AUGUSTUS CDS 499587 501116 1 - 0 ID=LTnewLM_250018700.1:CDS:1;Parent=LTnewLM_250018700.1 ### LTnewLM_25 . polypeptide 499587 501116 . - . ID=LTnewLM_250018700.1:pep;Derives_from=LTnewLM_250018700.1;orthologous_to=LmjF.25.1270_mRNA;ortholog_cluster=OG0002865;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 502235 505414 1 - . ID=LTnewLM_250018800 LTnewLM_25 AUGUSTUS mRNA 502235 505414 1 - . ID=LTnewLM_250018800.1;Parent=LTnewLM_250018800 LTnewLM_25 AUGUSTUS CDS 502235 505414 1 - 0 ID=LTnewLM_250018800.1:CDS:1;Parent=LTnewLM_250018800.1 ### LTnewLM_25 . polypeptide 502235 505414 . - . ID=LTnewLM_250018800.1:pep;Derives_from=LTnewLM_250018800.1;orthologous_to=LmjF.25.1280_mRNA;ortholog_cluster=OG0002866;product=term%3DCullin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_25 Pfam protein_match 502748 505204 . - . Parent=LTnewLM_250018800.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_25 AUGUSTUS gene 506345 507628 1 - . ID=LTnewLM_250018900 LTnewLM_25 AUGUSTUS mRNA 506345 507628 1 - . ID=LTnewLM_250018900.1;Parent=LTnewLM_250018900 LTnewLM_25 AUGUSTUS CDS 506345 507628 1 - 0 ID=LTnewLM_250018900.1:CDS:1;Parent=LTnewLM_250018900.1 ### LTnewLM_25 . polypeptide 506345 507628 . - . ID=LTnewLM_250018900.1:pep;Derives_from=LTnewLM_250018900.1;orthologous_to=LmjF.25.1290_mRNA;ortholog_cluster=OG0002867;product=term%3DNPL4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05021 LTnewLM_25 Pfam protein_match 507095 507277 . - . Parent=LTnewLM_250018900.1:pep;Name=PF05021;signature_desc=NPL4 family ### LTnewLM_25 AUGUSTUS gene 508660 510639 1 - . ID=LTnewLM_250019000 LTnewLM_25 AUGUSTUS mRNA 508660 510639 1 - . ID=LTnewLM_250019000.1;Parent=LTnewLM_250019000 LTnewLM_25 AUGUSTUS CDS 508660 510639 1 - 0 ID=LTnewLM_250019000.1:CDS:1;Parent=LTnewLM_250019000.1 ### LTnewLM_25 . polypeptide 508660 510639 . - . ID=LTnewLM_250019000.1:pep;Derives_from=LTnewLM_250019000.1;orthologous_to=LmjF.25.1300_mRNA;ortholog_cluster=OG0002868;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 512174 512941 1 - . ID=LTnewLM_250019100 LTnewLM_25 AUGUSTUS mRNA 512174 512941 1 - . ID=LTnewLM_250019100.1;Parent=LTnewLM_250019100 LTnewLM_25 AUGUSTUS CDS 512174 512941 1 - 0 ID=LTnewLM_250019100.1:CDS:1;Parent=LTnewLM_250019100.1 ### LTnewLM_25 . polypeptide 512174 512941 . - . ID=LTnewLM_250019100.1:pep;Derives_from=LTnewLM_250019100.1;orthologous_to=LmjF.25.1310_mRNA;ortholog_cluster=OG0002869;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 514008 514262 1 - . ID=LTnewLM_250019200 LTnewLM_25 AUGUSTUS mRNA 514008 514262 1 - . ID=LTnewLM_250019200.1;Parent=LTnewLM_250019200 LTnewLM_25 AUGUSTUS CDS 514008 514262 1 - 0 ID=LTnewLM_250019200.1:CDS:1;Parent=LTnewLM_250019200.1 ### LTnewLM_25 . polypeptide 514008 514262 . - . ID=LTnewLM_250019200.1:pep;Derives_from=LTnewLM_250019200.1;orthologous_to=LmjF.25.1315_mRNA;ortholog_cluster=OG0002870;product=term%3DRNA polymerases N / 8 kDa subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01194;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_25 Pfam protein_match 514089 514259 . - . Parent=LTnewLM_250019200.1:pep;Name=PF01194;signature_desc=RNA polymerases N / 8 kDa subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_25 AUGUSTUS gene 515450 516403 1 - . ID=LTnewLM_250019300 LTnewLM_25 AUGUSTUS mRNA 515450 516403 1 - . ID=LTnewLM_250019300.1;Parent=LTnewLM_250019300 LTnewLM_25 AUGUSTUS CDS 515450 516403 1 - 0 ID=LTnewLM_250019300.1:CDS:1;Parent=LTnewLM_250019300.1 ### LTnewLM_25 . polypeptide 515450 516403 . - . ID=LTnewLM_250019300.1:pep;Derives_from=LTnewLM_250019300.1;orthologous_to=LmjF.25.1320_mRNA;ortholog_cluster=OG0002871;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_25 Pfam protein_match 515657 516229 . - . Parent=LTnewLM_250019300.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_25 AUGUSTUS gene 518667 520784 1 - . ID=LTnewLM_250019400 LTnewLM_25 AUGUSTUS mRNA 518667 520784 1 - . ID=LTnewLM_250019400.1;Parent=LTnewLM_250019400 LTnewLM_25 AUGUSTUS CDS 518667 520784 1 - 0 ID=LTnewLM_250019400.1:CDS:1;Parent=LTnewLM_250019400.1 ### LTnewLM_25 . polypeptide 518667 520784 . - . ID=LTnewLM_250019400.1:pep;Derives_from=LTnewLM_250019400.1;orthologous_to=LmjF.25.1330_mRNA;ortholog_cluster=OG0002872;product=term%3DGIY-YIG catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01541 LTnewLM_25 Pfam protein_match 520539 520769 . - . Parent=LTnewLM_250019400.1:pep;Name=PF01541;signature_desc=GIY-YIG catalytic domain ### LTnewLM_25 AUGUSTUS gene 521938 524985 1 - . ID=LTnewLM_250019500 LTnewLM_25 AUGUSTUS mRNA 521938 524985 1 - . ID=LTnewLM_250019500.1;Parent=LTnewLM_250019500 LTnewLM_25 AUGUSTUS CDS 521938 524985 1 - 0 ID=LTnewLM_250019500.1:CDS:1;Parent=LTnewLM_250019500.1 ### LTnewLM_25 . polypeptide 521938 524985 . - . ID=LTnewLM_250019500.1:pep;Derives_from=LTnewLM_250019500.1;orthologous_to=LmjF.25.1340_mRNA;ortholog_cluster=OG0002873;product=term%3DSec23/Sec24 zinc finger/Sec23/Sec24 trunk domain/Sec23/Sec24 beta-sandwich domain/Sec23/Sec24 helical domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04810|Pfam:PF04811|Pfam:PF08033|Pfam:PF04815;Ontology_term=GO:0008270,GO:0030127,GO:0006886,GO:0006888 LTnewLM_25 Pfam protein_match 522421 522765 . - . Parent=LTnewLM_250019500.1:pep;Name=PF04815;signature_desc=Sec23/Sec24 helical domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_25 Pfam protein_match 522802 523050 . - . Parent=LTnewLM_250019500.1:pep;Name=PF08033;signature_desc=Sec23/Sec24 beta-sandwich domain LTnewLM_25 Pfam protein_match 523072 523773 . - . Parent=LTnewLM_250019500.1:pep;Name=PF04811;signature_desc=Sec23/Sec24 trunk domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_25 Pfam protein_match 523927 524028 . - . Parent=LTnewLM_250019500.1:pep;Name=PF04810;signature_desc=Sec23/Sec24 zinc finger;Ontology_term=GO:0008270,GO:0006886,GO:0006888,GO:0030127 ### LTnewLM_25 AUGUSTUS gene 525718 533493 1 - . ID=LTnewLM_250019600 LTnewLM_25 AUGUSTUS mRNA 525718 533493 1 - . ID=LTnewLM_250019600.1;Parent=LTnewLM_250019600 LTnewLM_25 AUGUSTUS CDS 525718 533493 1 - 0 ID=LTnewLM_250019600.1:CDS:1;Parent=LTnewLM_250019600.1 ### LTnewLM_25 . polypeptide 525718 533493 . - . ID=LTnewLM_250019600.1:pep;Derives_from=LTnewLM_250019600.1;orthologous_to=LmjF.25.1350_mRNA;ortholog_cluster=OG0002874;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 534295 537195 1 - . ID=LTnewLM_250019700 LTnewLM_25 AUGUSTUS mRNA 534295 537195 1 - . ID=LTnewLM_250019700.1;Parent=LTnewLM_250019700 LTnewLM_25 AUGUSTUS CDS 534295 537195 1 - 0 ID=LTnewLM_250019700.1:CDS:1;Parent=LTnewLM_250019700.1 ### LTnewLM_25 . polypeptide 534295 537195 . - . ID=LTnewLM_250019700.1:pep;Derives_from=LTnewLM_250019700.1;orthologous_to=LmjF.25.1360_mRNA;ortholog_cluster=OG0002875;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 538892 540313 1 - . ID=LTnewLM_250019800 LTnewLM_25 AUGUSTUS mRNA 538892 540313 1 - . ID=LTnewLM_250019800.1;Parent=LTnewLM_250019800 LTnewLM_25 AUGUSTUS CDS 538892 540313 1 - 0 ID=LTnewLM_250019800.1:CDS:1;Parent=LTnewLM_250019800.1 ### LTnewLM_25 . polypeptide 538892 540313 . - . ID=LTnewLM_250019800.1:pep;Derives_from=LTnewLM_250019800.1;orthologous_to=LmjF.25.1370_mRNA;ortholog_cluster=OG0002876;product=term%3DTAP42-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04177;Ontology_term=GO:0009966 LTnewLM_25 Pfam protein_match 538931 539815 . - . Parent=LTnewLM_250019800.1:pep;Name=PF04177;signature_desc=TAP42-like family;Ontology_term=GO:0009966 LTnewLM_25 Pfam protein_match 540008 540268 . - . Parent=LTnewLM_250019800.1:pep;Name=PF04177;signature_desc=TAP42-like family;Ontology_term=GO:0009966 ### LTnewLM_25 AUGUSTUS gene 541391 542101 1 - . ID=LTnewLM_250019900 LTnewLM_25 AUGUSTUS mRNA 541391 542101 1 - . ID=LTnewLM_250019900.1;Parent=LTnewLM_250019900 LTnewLM_25 AUGUSTUS CDS 541391 542101 1 - 0 ID=LTnewLM_250019900.1:CDS:1;Parent=LTnewLM_250019900.1 ### LTnewLM_25 . polypeptide 541391 542101 . - . ID=LTnewLM_250019900.1:pep;Derives_from=LTnewLM_250019900.1;orthologous_to=LmjF.25.1380_mRNA;ortholog_cluster=OG0002877;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 543068 543868 1 - . ID=LTnewLM_250020000 LTnewLM_25 AUGUSTUS mRNA 543068 543868 1 - . ID=LTnewLM_250020000.1;Parent=LTnewLM_250020000 LTnewLM_25 AUGUSTUS CDS 543068 543868 1 - 0 ID=LTnewLM_250020000.1:CDS:1;Parent=LTnewLM_250020000.1 ### LTnewLM_25 . polypeptide 543068 543868 . - . ID=LTnewLM_250020000.1:pep;Derives_from=LTnewLM_250020000.1;orthologous_to=LmjF.25.1390_mRNA;ortholog_cluster=OG0002878;product=term%3DConserved hypothetical ATP binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03029 LTnewLM_25 Pfam protein_match 543119 543847 . - . Parent=LTnewLM_250020000.1:pep;Name=PF03029;signature_desc=Conserved hypothetical ATP binding protein ### LTnewLM_25 AUGUSTUS gene 545330 546517 1 - . ID=LTnewLM_250020100 LTnewLM_25 AUGUSTUS mRNA 545330 546517 1 - . ID=LTnewLM_250020100.1;Parent=LTnewLM_250020100 LTnewLM_25 AUGUSTUS CDS 545330 546517 1 - 0 ID=LTnewLM_250020100.1:CDS:1;Parent=LTnewLM_250020100.1 ### LTnewLM_25 . polypeptide 545330 546517 . - . ID=LTnewLM_250020100.1:pep;Derives_from=LTnewLM_250020100.1;orthologous_to=LmjF.25.1400_mRNA;ortholog_cluster=OG0002879;product=term%3DSurp module%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01805;Ontology_term=GO:0003723,GO:0006396 LTnewLM_25 Pfam protein_match 545879 546028 . - . Parent=LTnewLM_250020100.1:pep;Name=PF01805;signature_desc=Surp module;Ontology_term=GO:0003723,GO:0006396 ### LTnewLM_25 AUGUSTUS gene 547780 549552 1 - . ID=LTnewLM_250020200 LTnewLM_25 AUGUSTUS mRNA 547780 549552 1 - . ID=LTnewLM_250020200.1;Parent=LTnewLM_250020200 LTnewLM_25 AUGUSTUS CDS 547780 549552 1 - 0 ID=LTnewLM_250020200.1:CDS:1;Parent=LTnewLM_250020200.1 ### LTnewLM_25 . polypeptide 547780 549552 . - . ID=LTnewLM_250020200.1:pep;Derives_from=LTnewLM_250020200.1;orthologous_to=LmjF.25.1410_mRNA;ortholog_cluster=OG0002880;product=term%3DDNA polymerase delta subunit OB-fold domain/DNA polymerase alpha/epsilon subunit B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18018|Pfam:PF04042;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_25 Pfam protein_match 548035 548256 . - . Parent=LTnewLM_250020200.1:pep;Name=PF04042;signature_desc=DNA polymerase alpha/epsilon subunit B;Ontology_term=GO:0003677,GO:0003887,GO:0006260 LTnewLM_25 Pfam protein_match 548353 548754 . - . Parent=LTnewLM_250020200.1:pep;Name=PF04042;signature_desc=DNA polymerase alpha/epsilon subunit B;Ontology_term=GO:0003677,GO:0003887,GO:0006260 LTnewLM_25 Pfam protein_match 548905 549447 . - . Parent=LTnewLM_250020200.1:pep;Name=PF18018;signature_desc=DNA polymerase delta subunit OB-fold domain ### LTnewLM_25 AUGUSTUS gene 551620 552270 1 - . ID=LTnewLM_250020300 LTnewLM_25 AUGUSTUS mRNA 551620 552270 1 - . ID=LTnewLM_250020300.1;Parent=LTnewLM_250020300 LTnewLM_25 AUGUSTUS CDS 551620 552270 1 - 0 ID=LTnewLM_250020300.1:CDS:1;Parent=LTnewLM_250020300.1 ### LTnewLM_25 . polypeptide 551620 552270 . - . ID=LTnewLM_250020300.1:pep;Derives_from=LTnewLM_250020300.1;orthologous_to=LmjF.25.1420_mRNA;ortholog_cluster=OG0002881;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_25 Pfam protein_match 551767 552234 . - . Parent=LTnewLM_250020300.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_25 Pfam protein_match 551860 552240 . - . Parent=LTnewLM_250020300.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_25 Pfam protein_match 551896 552234 . - . Parent=LTnewLM_250020300.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_25 AUGUSTUS gene 553742 555205 1 - . ID=LTnewLM_250020400 LTnewLM_25 AUGUSTUS mRNA 553742 555205 1 - . ID=LTnewLM_250020400.1;Parent=LTnewLM_250020400 LTnewLM_25 AUGUSTUS CDS 553742 555205 1 - 0 ID=LTnewLM_250020400.1:CDS:1;Parent=LTnewLM_250020400.1 ### LTnewLM_25 . polypeptide 553742 555205 . - . ID=LTnewLM_250020400.1:pep;Derives_from=LTnewLM_250020400.1;orthologous_to=LmjF.25.1430_mRNA;ortholog_cluster=OG0002882;product=term%3DClusterin-associated protein-1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10234 LTnewLM_25 Pfam protein_match 554378 555166 . - . Parent=LTnewLM_250020400.1:pep;Name=PF10234;signature_desc=Clusterin-associated protein-1 ### LTnewLM_25 AUGUSTUS gene 556001 557530 1 - . ID=LTnewLM_250020500 LTnewLM_25 AUGUSTUS mRNA 556001 557530 1 - . ID=LTnewLM_250020500.1;Parent=LTnewLM_250020500 LTnewLM_25 AUGUSTUS CDS 556001 557530 1 - 0 ID=LTnewLM_250020500.1:CDS:1;Parent=LTnewLM_250020500.1 ### LTnewLM_25 . polypeptide 556001 557530 . - . ID=LTnewLM_250020500.1:pep;Derives_from=LTnewLM_250020500.1;orthologous_to=LmjF.25.1440_mRNA;ortholog_cluster=OG0002883;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 563290 564078 1 - . ID=LTnewLM_250020600 LTnewLM_25 AUGUSTUS mRNA 563290 564078 1 - . ID=LTnewLM_250020600.1;Parent=LTnewLM_250020600 LTnewLM_25 AUGUSTUS CDS 563290 564078 1 - 0 ID=LTnewLM_250020600.1:CDS:1;Parent=LTnewLM_250020600.1 ### LTnewLM_25 . polypeptide 563290 564078 . - . ID=LTnewLM_250020600.1:pep;Derives_from=LTnewLM_250020600.1;orthologous_to=LmjF.25.1443_mRNA;ortholog_cluster=OG0002884;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 566799 567059 1 - . ID=LTnewLM_250020700 LTnewLM_25 AUGUSTUS mRNA 566799 567059 1 - . ID=LTnewLM_250020700.1;Parent=LTnewLM_250020700 LTnewLM_25 AUGUSTUS CDS 566799 567059 1 - 0 ID=LTnewLM_250020700.1:CDS:1;Parent=LTnewLM_250020700.1 ### LTnewLM_25 . polypeptide 566799 567059 . - . ID=LTnewLM_250020700.1:pep;Derives_from=LTnewLM_250020700.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 568335 569108 1 - . ID=LTnewLM_250020800 LTnewLM_25 AUGUSTUS mRNA 568335 569108 1 - . ID=LTnewLM_250020800.1;Parent=LTnewLM_250020800 LTnewLM_25 AUGUSTUS CDS 568335 569108 1 - 0 ID=LTnewLM_250020800.1:CDS:1;Parent=LTnewLM_250020800.1 ### LTnewLM_25 . polypeptide 568335 569108 . - . ID=LTnewLM_250020800.1:pep;Derives_from=LTnewLM_250020800.1;orthologous_to=LmjF.25.1445_mRNA;ortholog_cluster=OG0002885;product=term%3DProtein of unknown function (DUF1295)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06966 LTnewLM_25 Pfam protein_match 568422 568673 . - . Parent=LTnewLM_250020800.1:pep;Name=PF06966;signature_desc=Protein of unknown function (DUF1295) ### LTnewLM_25 AUGUSTUS gene 569688 571007 1 - . ID=LTnewLM_250020900 LTnewLM_25 AUGUSTUS mRNA 569688 571007 1 - . ID=LTnewLM_250020900.1;Parent=LTnewLM_250020900 LTnewLM_25 AUGUSTUS CDS 569688 571007 1 - 0 ID=LTnewLM_250020900.1:CDS:1;Parent=LTnewLM_250020900.1 ### LTnewLM_25 . polypeptide 569688 571007 . - . ID=LTnewLM_250020900.1:pep;Derives_from=LTnewLM_250020900.1;orthologous_to=LmjF.25.1450_mRNA;ortholog_cluster=OG0002886;product=term%3DPCRF domain/RF-1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03462|Pfam:PF00472;Ontology_term=GO:0005737,GO:0006415,GO:0016149,GO:0003747 LTnewLM_25 Pfam protein_match 569841 570164 . - . Parent=LTnewLM_250020900.1:pep;Name=PF00472;signature_desc=RF-1 domain;Ontology_term=GO:0003747,GO:0006415 LTnewLM_25 Pfam protein_match 570198 570701 . - . Parent=LTnewLM_250020900.1:pep;Name=PF03462;signature_desc=PCRF domain;Ontology_term=GO:0016149,GO:0006415,GO:0005737 ### LTnewLM_25 AUGUSTUS gene 571585 573906 1 - . ID=LTnewLM_250021000 LTnewLM_25 AUGUSTUS mRNA 571585 573906 1 - . ID=LTnewLM_250021000.1;Parent=LTnewLM_250021000 LTnewLM_25 AUGUSTUS CDS 571585 573906 1 - 0 ID=LTnewLM_250021000.1:CDS:1;Parent=LTnewLM_250021000.1 ### LTnewLM_25 . polypeptide 571585 573906 . - . ID=LTnewLM_250021000.1:pep;Derives_from=LTnewLM_250021000.1;orthologous_to=LmjF.25.1460_mRNA;ortholog_cluster=OG0002887;product=term%3DDM10 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06565 LTnewLM_25 Pfam protein_match 572260 572544 . - . Parent=LTnewLM_250021000.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_25 Pfam protein_match 572746 573099 . - . Parent=LTnewLM_250021000.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_25 Pfam protein_match 573316 573609 . - . Parent=LTnewLM_250021000.1:pep;Name=PF06565;signature_desc=DM10 domain ### LTnewLM_25 AUGUSTUS gene 575128 576057 1 - . ID=LTnewLM_250021100 LTnewLM_25 AUGUSTUS mRNA 575128 576057 1 - . ID=LTnewLM_250021100.1;Parent=LTnewLM_250021100 LTnewLM_25 AUGUSTUS CDS 575128 576057 1 - 0 ID=LTnewLM_250021100.1:CDS:1;Parent=LTnewLM_250021100.1 ### LTnewLM_25 . polypeptide 575128 576057 . - . ID=LTnewLM_250021100.1:pep;Derives_from=LTnewLM_250021100.1;orthologous_to=LmjF.25.1470_mRNA;ortholog_cluster=OG0002888;product=term%3DCyclin%2C N-terminal domain/Cyclin%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00134|Pfam:PF02984;Ontology_term=GO:0005634 LTnewLM_25 Pfam protein_match 575158 575535 . - . Parent=LTnewLM_250021100.1:pep;Name=PF02984;signature_desc=Cyclin%2C C-terminal domain;Ontology_term=GO:0005634 LTnewLM_25 Pfam protein_match 575551 575922 . - . Parent=LTnewLM_250021100.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_25 AUGUSTUS gene 582283 584403 1 - . ID=LTnewLM_250021200 LTnewLM_25 AUGUSTUS mRNA 582283 584403 1 - . ID=LTnewLM_250021200.1;Parent=LTnewLM_250021200 LTnewLM_25 AUGUSTUS CDS 582283 584403 1 - 0 ID=LTnewLM_250021200.1:CDS:1;Parent=LTnewLM_250021200.1 ### LTnewLM_25 . polypeptide 582283 584403 . - . ID=LTnewLM_250021200.1:pep;Derives_from=LTnewLM_250021200.1;orthologous_to=LmjF.25.1480_mRNA;ortholog_cluster=OG0002889;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_25 Pfam protein_match 582931 583908 . - . Parent=LTnewLM_250021200.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_25 Pfam protein_match 584068 584352 . - . Parent=LTnewLM_250021200.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_25 AUGUSTUS gene 585502 589254 1 - . ID=LTnewLM_250021300 LTnewLM_25 AUGUSTUS mRNA 585502 589254 1 - . ID=LTnewLM_250021300.1;Parent=LTnewLM_250021300 LTnewLM_25 AUGUSTUS CDS 585502 589254 1 - 0 ID=LTnewLM_250021300.1:CDS:1;Parent=LTnewLM_250021300.1 ### LTnewLM_25 . polypeptide 585502 589254 . - . ID=LTnewLM_250021300.1:pep;Derives_from=LTnewLM_250021300.1;orthologous_to=LmjF.25.1490_mRNA;ortholog_cluster=OG0002890;product=term%3DRab3 GTPase-activating protein catalytic subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13890;Ontology_term=GO:0005097 LTnewLM_25 Pfam protein_match 586279 586824 . - . Parent=LTnewLM_250021300.1:pep;Name=PF13890;signature_desc=Rab3 GTPase-activating protein catalytic subunit;Ontology_term=GO:0005097 ### LTnewLM_25 AUGUSTUS gene 590089 592215 1 - . ID=LTnewLM_250021400 LTnewLM_25 AUGUSTUS mRNA 590089 592215 1 - . ID=LTnewLM_250021400.1;Parent=LTnewLM_250021400 LTnewLM_25 AUGUSTUS CDS 590089 592215 1 - 0 ID=LTnewLM_250021400.1:CDS:1;Parent=LTnewLM_250021400.1 ### LTnewLM_25 . polypeptide 590089 592215 . - . ID=LTnewLM_250021400.1:pep;Derives_from=LTnewLM_250021400.1;orthologous_to=LmjF.25.1500_mRNA;ortholog_cluster=OG0002891;product=term%3DPUA domain/16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01472|Pfam:PF01189;Ontology_term=GO:0003723,GO:0008168 LTnewLM_25 Pfam protein_match 590314 590661 . - . Parent=LTnewLM_250021400.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 LTnewLM_25 Pfam protein_match 591604 591711 . - . Parent=LTnewLM_250021400.1:pep;Name=PF01472;signature_desc=PUA domain;Ontology_term=GO:0003723 ### LTnewLM_25 AUGUSTUS gene 592863 594509 1 - . ID=LTnewLM_250021500 LTnewLM_25 AUGUSTUS mRNA 592863 594509 1 - . ID=LTnewLM_250021500.1;Parent=LTnewLM_250021500 LTnewLM_25 AUGUSTUS CDS 592863 594509 1 - 0 ID=LTnewLM_250021500.1:CDS:1;Parent=LTnewLM_250021500.1 ### LTnewLM_25 . polypeptide 592863 594509 . - . ID=LTnewLM_250021500.1:pep;Derives_from=LTnewLM_250021500.1;orthologous_to=LmjF.25.1510_mRNA;ortholog_cluster=OG0002892;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 596687 599509 1 - . ID=LTnewLM_250021600 LTnewLM_25 AUGUSTUS mRNA 596687 599509 1 - . ID=LTnewLM_250021600.1;Parent=LTnewLM_250021600 LTnewLM_25 AUGUSTUS CDS 596687 599509 1 - 0 ID=LTnewLM_250021600.1:CDS:1;Parent=LTnewLM_250021600.1 ### LTnewLM_25 . polypeptide 596687 599509 . - . ID=LTnewLM_250021600.1:pep;Derives_from=LTnewLM_250021600.1;orthologous_to=LmjF.25.1520_mRNA;ortholog_cluster=OG0002893;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF17667;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_25 Pfam protein_match 597320 598150 . - . Parent=LTnewLM_250021600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 597335 598141 . - . Parent=LTnewLM_250021600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_25 Pfam protein_match 597500 597799 . - . Parent=LTnewLM_250021600.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_25 AUGUSTUS gene 600285 602075 1 - . ID=LTnewLM_250021700 LTnewLM_25 AUGUSTUS mRNA 600285 602075 1 - . ID=LTnewLM_250021700.1;Parent=LTnewLM_250021700 LTnewLM_25 AUGUSTUS CDS 600285 602075 1 - 0 ID=LTnewLM_250021700.1:CDS:1;Parent=LTnewLM_250021700.1 ### LTnewLM_25 . polypeptide 600285 602075 . - . ID=LTnewLM_250021700.1:pep;Derives_from=LTnewLM_250021700.1;orthologous_to=LmjF.25.1530_mRNA;ortholog_cluster=OG0002894;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 602995 605238 1 - . ID=LTnewLM_250021800 LTnewLM_25 AUGUSTUS mRNA 602995 605238 1 - . ID=LTnewLM_250021800.1;Parent=LTnewLM_250021800 LTnewLM_25 AUGUSTUS CDS 602995 605238 1 - 0 ID=LTnewLM_250021800.1:CDS:1;Parent=LTnewLM_250021800.1 ### LTnewLM_25 . polypeptide 602995 605238 . - . ID=LTnewLM_250021800.1:pep;Derives_from=LTnewLM_250021800.1;orthologous_to=LmjF.25.1540_mRNA;ortholog_cluster=OG0002895;product=term%3DATPase of the ABC class N-terminal/ATPase of the ABC class%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20446|Pfam:PF09818 LTnewLM_25 Pfam protein_match 603598 604395 . - . Parent=LTnewLM_250021800.1:pep;Name=PF09818;signature_desc=ATPase of the ABC class LTnewLM_25 Pfam protein_match 604402 604989 . - . Parent=LTnewLM_250021800.1:pep;Name=PF20446;signature_desc=ATPase of the ABC class N-terminal ### LTnewLM_25 AUGUSTUS gene 616805 617113 1 - . ID=LTnewLM_250021900 LTnewLM_25 AUGUSTUS mRNA 616805 617113 1 - . ID=LTnewLM_250021900.1;Parent=LTnewLM_250021900 LTnewLM_25 AUGUSTUS CDS 616805 617113 1 - 0 ID=LTnewLM_250021900.1:CDS:1;Parent=LTnewLM_250021900.1 ### LTnewLM_25 . polypeptide 616805 617113 . - . ID=LTnewLM_250021900.1:pep;Derives_from=LTnewLM_250021900.1;orthologous_to=LmjF.25.1550_mRNA;ortholog_cluster=OG0002896;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 619148 621730 1 - . ID=LTnewLM_250022000 LTnewLM_25 AUGUSTUS mRNA 619148 621730 1 - . ID=LTnewLM_250022000.1;Parent=LTnewLM_250022000 LTnewLM_25 AUGUSTUS CDS 619148 621730 1 - 0 ID=LTnewLM_250022000.1:CDS:1;Parent=LTnewLM_250022000.1 ### LTnewLM_25 . polypeptide 619148 621730 . - . ID=LTnewLM_250022000.1:pep;Derives_from=LTnewLM_250022000.1;orthologous_to=LmjF.25.1560_mRNA;ortholog_cluster=OG0002897;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_25 Pfam protein_match 619163 619822 . - . Parent=LTnewLM_250022000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 620222 620329 . - . Parent=LTnewLM_250022000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_25 AUGUSTUS gene 623669 630472 1 - . ID=LTnewLM_250022100 LTnewLM_25 AUGUSTUS mRNA 623669 630472 1 - . ID=LTnewLM_250022100.1;Parent=LTnewLM_250022100 LTnewLM_25 AUGUSTUS CDS 623669 630472 1 - 0 ID=LTnewLM_250022100.1:CDS:1;Parent=LTnewLM_250022100.1 ### LTnewLM_25 . polypeptide 623669 630472 . - . ID=LTnewLM_250022100.1:pep;Derives_from=LTnewLM_250022100.1;orthologous_to=LmjF.25.1570_mRNA;ortholog_cluster=OG0002898;product=term%3DER-Golgi trafficking TRAPP I complex 85 kDa subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12739 LTnewLM_25 Pfam protein_match 628391 629794 . - . Parent=LTnewLM_250022100.1:pep;Name=PF12739;signature_desc=ER-Golgi trafficking TRAPP I complex 85 kDa subunit ### LTnewLM_25 AUGUSTUS gene 634019 635575 1 - . ID=LTnewLM_250022200 LTnewLM_25 AUGUSTUS mRNA 634019 635575 1 - . ID=LTnewLM_250022200.1;Parent=LTnewLM_250022200 LTnewLM_25 AUGUSTUS CDS 634019 635575 1 - 0 ID=LTnewLM_250022200.1:CDS:1;Parent=LTnewLM_250022200.1 ### LTnewLM_25 . polypeptide 634019 635575 . - . ID=LTnewLM_250022200.1:pep;Derives_from=LTnewLM_250022200.1;orthologous_to=LmjF.25.1580_mRNA;ortholog_cluster=OG0002899;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_25 Pfam protein_match 634556 635152 . - . Parent=LTnewLM_250022200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_25 Pfam protein_match 634646 635170 . - . Parent=LTnewLM_250022200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_25 Liftoff gene 636810 640448 . - . ID=LTnewLM_250022300;coverage=0.991;sequence_ID=0.913;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.1590_0 LTnewLM_25 Liftoff mRNA 636810 640448 . - . ID=LTnewLM_250022300.1;Parent=LTnewLM_250022300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 636810 640448 . - 0 ID=LTnewLM_250022300.1:CDS:1;Parent=LTnewLM_250022300.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 636810 640448 . - . ID=LTnewLM_250022300.1:pep;Derives_from=LTnewLM_250022300.1;orthologous_to=LmjF.25.1590_mRNA;ortholog_cluster=OG0002900;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 641731 645238 1.37 - . ID=LTnewLM_250022400 LTnewLM_25 AUGUSTUS mRNA 641731 645238 0.45 - . ID=LTnewLM_250022400.1;Parent=LTnewLM_250022400 LTnewLM_25 AUGUSTUS CDS 641731 643435 0.45 - 1 ID=LTnewLM_250022400.1:CDS:1;Parent=LTnewLM_250022400.1 LTnewLM_25 AUGUSTUS CDS 643488 645238 0.45 - 0 ID=LTnewLM_250022400.1:CDS:2;Parent=LTnewLM_250022400.1 LTnewLM_25 AUGUSTUS mRNA 644671 645238 0.92 - . ID=LTnewLM_250022400.2;Parent=LTnewLM_250022400 LTnewLM_25 AUGUSTUS CDS 644671 644686 0.99 - 1 ID=LTnewLM_250022400.2:CDS:1;Parent=LTnewLM_250022400.2 LTnewLM_25 AUGUSTUS CDS 644736 645238 0.92 - 0 ID=LTnewLM_250022400.2:CDS:2;Parent=LTnewLM_250022400.2 ### LTnewLM_25 . polypeptide 641731 645238 . - . ID=LTnewLM_250022400.1:pep;Derives_from=LTnewLM_250022400.1;orthologous_to=LTnewLM_250022400.2,LmjF.25.1600_mRNA;ortholog_cluster=OG0000397;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 643574 643642 . - . Parent=LTnewLM_250022400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_25 . polypeptide 644671 645238 . - . ID=LTnewLM_250022400.2:pep;Derives_from=LTnewLM_250022400.2;orthologous_to=LTnewLM_250022400.1,LmjF.25.1600_mRNA;ortholog_cluster=OG0000397;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 646431 647411 1 - . ID=LTnewLM_250022500 LTnewLM_25 AUGUSTUS mRNA 646431 647411 1 - . ID=LTnewLM_250022500.1;Parent=LTnewLM_250022500 LTnewLM_25 AUGUSTUS CDS 646431 647411 1 - 0 ID=LTnewLM_250022500.1:CDS:1;Parent=LTnewLM_250022500.1 ### LTnewLM_25 . polypeptide 646431 647411 . - . ID=LTnewLM_250022500.1:pep;Derives_from=LTnewLM_250022500.1;orthologous_to=LmjF.25.1610_mRNA;ortholog_cluster=OG0002901;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 648745 649182 1 - . ID=LTnewLM_250022600 LTnewLM_25 AUGUSTUS mRNA 648745 649182 1 - . ID=LTnewLM_250022600.1;Parent=LTnewLM_250022600 LTnewLM_25 AUGUSTUS CDS 648745 649182 1 - 0 ID=LTnewLM_250022600.1:CDS:1;Parent=LTnewLM_250022600.1 ### LTnewLM_25 . polypeptide 648745 649182 . - . ID=LTnewLM_250022600.1:pep;Derives_from=LTnewLM_250022600.1;orthologous_to=LmjF.25.1620_mRNA;ortholog_cluster=OG0002902;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 650961 652793 1 - . ID=LTnewLM_250022700 LTnewLM_25 AUGUSTUS mRNA 650961 652793 1 - . ID=LTnewLM_250022700.1;Parent=LTnewLM_250022700 LTnewLM_25 AUGUSTUS CDS 650961 652793 1 - 0 ID=LTnewLM_250022700.1:CDS:1;Parent=LTnewLM_250022700.1 ### LTnewLM_25 . polypeptide 650961 652793 . - . ID=LTnewLM_250022700.1:pep;Derives_from=LTnewLM_250022700.1;orthologous_to=LmjF.25.1630_mRNA;ortholog_cluster=OG0002903;product=term%3DDiacylglycerol acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03982;Ontology_term=GO:0016747 LTnewLM_25 Pfam protein_match 650985 651833 . - . Parent=LTnewLM_250022700.1:pep;Name=PF03982;signature_desc=Diacylglycerol acyltransferase;Ontology_term=GO:0016747 ### LTnewLM_25 AUGUSTUS gene 654219 656460 1 - . ID=LTnewLM_250022800 LTnewLM_25 AUGUSTUS mRNA 654219 656460 1 - . ID=LTnewLM_250022800.1;Parent=LTnewLM_250022800 LTnewLM_25 AUGUSTUS CDS 654219 655481 1 - 0 ID=LTnewLM_250022800.1:CDS:1;Parent=LTnewLM_250022800.1 LTnewLM_25 AUGUSTUS CDS 656209 656460 1 - 0 ID=LTnewLM_250022800.1:CDS:2;Parent=LTnewLM_250022800.1 ### LTnewLM_25 . polypeptide 654219 656460 . - . ID=LTnewLM_250022800.1:pep;Derives_from=LTnewLM_250022800.1;orthologous_to=LmjF.25.1640_mRNA;ortholog_cluster=OG0002904;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 657177 657878 1 - . ID=LTnewLM_250022900 LTnewLM_25 AUGUSTUS mRNA 657177 657878 1 - . ID=LTnewLM_250022900.1;Parent=LTnewLM_250022900 LTnewLM_25 AUGUSTUS CDS 657177 657878 1 - 0 ID=LTnewLM_250022900.1:CDS:1;Parent=LTnewLM_250022900.1 ### LTnewLM_25 . polypeptide 657177 657878 . - . ID=LTnewLM_250022900.1:pep;Derives_from=LTnewLM_250022900.1;orthologous_to=LmjF.25.1650_mRNA;ortholog_cluster=OG0002905;product=term%3DElongation factor P (EF-P) KOW-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08207 LTnewLM_25 Pfam protein_match 657615 657758 . - . Parent=LTnewLM_250022900.1:pep;Name=PF08207;signature_desc=Elongation factor P (EF-P) KOW-like domain ### LTnewLM_25 AUGUSTUS gene 658915 661797 1 - . ID=LTnewLM_250023000 LTnewLM_25 AUGUSTUS mRNA 658915 661797 1 - . ID=LTnewLM_250023000.1;Parent=LTnewLM_250023000 LTnewLM_25 AUGUSTUS CDS 658915 661797 1 - 0 ID=LTnewLM_250023000.1:CDS:1;Parent=LTnewLM_250023000.1 ### LTnewLM_25 . polypeptide 658915 661797 . - . ID=LTnewLM_250023000.1:pep;Derives_from=LTnewLM_250023000.1;orthologous_to=LmjF.25.1660_mRNA;ortholog_cluster=OG0002906;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 662631 663236 1 - . ID=LTnewLM_250023100 LTnewLM_25 AUGUSTUS mRNA 662631 663236 1 - . ID=LTnewLM_250023100.1;Parent=LTnewLM_250023100 LTnewLM_25 AUGUSTUS CDS 662631 663236 1 - 0 ID=LTnewLM_250023100.1:CDS:1;Parent=LTnewLM_250023100.1 ### LTnewLM_25 . polypeptide 662631 663236 . - . ID=LTnewLM_250023100.1:pep;Derives_from=LTnewLM_250023100.1;orthologous_to=LmjF.25.1670_mRNA;ortholog_cluster=OG0002907;product=term%3DHORMA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02301 LTnewLM_25 Pfam protein_match 662667 663200 . - . Parent=LTnewLM_250023100.1:pep;Name=PF02301;signature_desc=HORMA domain ### LTnewLM_25 AUGUSTUS gene 664633 670383 1 - . ID=LTnewLM_250023200 LTnewLM_25 AUGUSTUS mRNA 664633 670383 1 - . ID=LTnewLM_250023200.1;Parent=LTnewLM_250023200 LTnewLM_25 AUGUSTUS CDS 664633 670383 1 - 0 ID=LTnewLM_250023200.1:CDS:1;Parent=LTnewLM_250023200.1 ### LTnewLM_25 . polypeptide 664633 670383 . - . ID=LTnewLM_250023200.1:pep;Derives_from=LTnewLM_250023200.1;orthologous_to=LmjF.25.1680_mRNA;ortholog_cluster=OG0002908;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 671407 672243 1 - . ID=LTnewLM_250023300 LTnewLM_25 AUGUSTUS mRNA 671407 672243 1 - . ID=LTnewLM_250023300.1;Parent=LTnewLM_250023300 LTnewLM_25 AUGUSTUS CDS 671407 672243 1 - 0 ID=LTnewLM_250023300.1:CDS:1;Parent=LTnewLM_250023300.1 ### LTnewLM_25 . polypeptide 671407 672243 . - . ID=LTnewLM_250023300.1:pep;Derives_from=LTnewLM_250023300.1;orthologous_to=LmjF.25.1690_mRNA;ortholog_cluster=OG0002909;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 673863 677303 1 - . ID=LTnewLM_250023400 LTnewLM_25 AUGUSTUS mRNA 673863 677303 1 - . ID=LTnewLM_250023400.1;Parent=LTnewLM_250023400 LTnewLM_25 AUGUSTUS CDS 673863 677303 1 - 0 ID=LTnewLM_250023400.1:CDS:1;Parent=LTnewLM_250023400.1 ### LTnewLM_25 . polypeptide 673863 677303 . - . ID=LTnewLM_250023400.1:pep;Derives_from=LTnewLM_250023400.1;orthologous_to=LmjF.25.1700_mRNA;ortholog_cluster=OG0002910;product=term%3DLeucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580 LTnewLM_25 Pfam protein_match 676614 676907 . - . Parent=LTnewLM_250023400.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_25 AUGUSTUS gene 678021 678416 1 - . ID=LTnewLM_250023500 LTnewLM_25 AUGUSTUS mRNA 678021 678416 1 - . ID=LTnewLM_250023500.1;Parent=LTnewLM_250023500 LTnewLM_25 AUGUSTUS CDS 678021 678416 1 - 0 ID=LTnewLM_250023500.1:CDS:1;Parent=LTnewLM_250023500.1 ### LTnewLM_25 . polypeptide 678021 678416 . - . ID=LTnewLM_250023500.1:pep;Derives_from=LTnewLM_250023500.1;orthologous_to=LmjF.25.1705_mRNA;ortholog_cluster=OG0002911;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_25 Pfam protein_match 678120 678413 . - . Parent=LTnewLM_250023500.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_25 AUGUSTUS gene 681080 682132 1 - . ID=LTnewLM_250023600 LTnewLM_25 AUGUSTUS mRNA 681080 682132 1 - . ID=LTnewLM_250023600.1;Parent=LTnewLM_250023600 LTnewLM_25 AUGUSTUS CDS 681080 682132 1 - 0 ID=LTnewLM_250023600.1:CDS:1;Parent=LTnewLM_250023600.1 ### LTnewLM_25 . polypeptide 681080 682132 . - . ID=LTnewLM_250023600.1:pep;Derives_from=LTnewLM_250023600.1;orthologous_to=LmjF.25.1710_mRNA;ortholog_cluster=OG0002912;product=term%3DTransketolase%2C pyrimidine binding domain/Transketolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02779|Pfam:PF02780;Ontology_term=GO:0003824,GO:0008152 LTnewLM_25 Pfam protein_match 681113 681481 . - . Parent=LTnewLM_250023600.1:pep;Name=PF02780;signature_desc=Transketolase%2C C-terminal domain;Ontology_term=GO:0003824,GO:0008152 LTnewLM_25 Pfam protein_match 681539 682060 . - . Parent=LTnewLM_250023600.1:pep;Name=PF02779;signature_desc=Transketolase%2C pyrimidine binding domain ### LTnewLM_25 AUGUSTUS gene 683183 687895 1 - . ID=LTnewLM_250023700 LTnewLM_25 AUGUSTUS mRNA 683183 687895 1 - . ID=LTnewLM_250023700.1;Parent=LTnewLM_250023700 LTnewLM_25 AUGUSTUS CDS 683183 687895 1 - 0 ID=LTnewLM_250023700.1:CDS:1;Parent=LTnewLM_250023700.1 ### LTnewLM_25 . polypeptide 683183 687895 . - . ID=LTnewLM_250023700.1:pep;Derives_from=LTnewLM_250023700.1;orthologous_to=LmjF.25.1720_mRNA;ortholog_cluster=OG0002913;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 689077 690039 1 - . ID=LTnewLM_250023800 LTnewLM_25 AUGUSTUS mRNA 689077 690039 1 - . ID=LTnewLM_250023800.1;Parent=LTnewLM_250023800 LTnewLM_25 AUGUSTUS CDS 689077 690039 1 - 0 ID=LTnewLM_250023800.1:CDS:1;Parent=LTnewLM_250023800.1 ### LTnewLM_25 . polypeptide 689077 690039 . - . ID=LTnewLM_250023800.1:pep;Derives_from=LTnewLM_250023800.1;orthologous_to=LmjF.25.1730_mRNA;ortholog_cluster=OG0002914;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 691126 692049 1 - . ID=LTnewLM_250023900 LTnewLM_25 AUGUSTUS mRNA 691126 692049 1 - . ID=LTnewLM_250023900.1;Parent=LTnewLM_250023900 LTnewLM_25 AUGUSTUS CDS 691126 692049 1 - 0 ID=LTnewLM_250023900.1:CDS:1;Parent=LTnewLM_250023900.1 ### LTnewLM_25 . polypeptide 691126 692049 . - . ID=LTnewLM_250023900.1:pep;Derives_from=LTnewLM_250023900.1;orthologous_to=LmjF.25.1740_mRNA;ortholog_cluster=OG0002915;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 694348 694776 1 - . ID=LTnewLM_250024000 LTnewLM_25 AUGUSTUS mRNA 694348 694776 1 - . ID=LTnewLM_250024000.1;Parent=LTnewLM_250024000 LTnewLM_25 AUGUSTUS CDS 694348 694776 1 - 0 ID=LTnewLM_250024000.1:CDS:1;Parent=LTnewLM_250024000.1 ### LTnewLM_25 . polypeptide 694348 694776 . - . ID=LTnewLM_250024000.1:pep;Derives_from=LTnewLM_250024000.1;orthologous_to=LmjF.25.1750_mRNA;ortholog_cluster=OG0002916;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_25 Pfam protein_match 694426 694713 . - . Parent=LTnewLM_250024000.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_25 AUGUSTUS gene 695469 696974 1 - . ID=LTnewLM_250024100 LTnewLM_25 AUGUSTUS mRNA 695469 696974 1 - . ID=LTnewLM_250024100.1;Parent=LTnewLM_250024100 LTnewLM_25 AUGUSTUS CDS 695469 696974 1 - 0 ID=LTnewLM_250024100.1:CDS:1;Parent=LTnewLM_250024100.1 ### LTnewLM_25 . polypeptide 695469 696974 . - . ID=LTnewLM_250024100.1:pep;Derives_from=LTnewLM_250024100.1;orthologous_to=LmjF.25.1760_mRNA;ortholog_cluster=OG0002917;product=term%3DRecQ mediated genome instability protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08585 LTnewLM_25 Pfam protein_match 696225 696734 . - . Parent=LTnewLM_250024100.1:pep;Name=PF08585;signature_desc=RecQ mediated genome instability protein ### LTnewLM_25 AUGUSTUS gene 699822 700742 1 - . ID=LTnewLM_250024200 LTnewLM_25 AUGUSTUS mRNA 699822 700742 1 - . ID=LTnewLM_250024200.1;Parent=LTnewLM_250024200 LTnewLM_25 AUGUSTUS CDS 699822 700742 1 - 0 ID=LTnewLM_250024200.1:CDS:1;Parent=LTnewLM_250024200.1 ### LTnewLM_25 . polypeptide 699822 700742 . - . ID=LTnewLM_250024200.1:pep;Derives_from=LTnewLM_250024200.1;orthologous_to=LmjF.25.1770_mRNA;ortholog_cluster=OG0002918;product=term%3D3-oxo-5-alpha-steroid 4-dehydrogenase/Protein of unknown function (DUF1295)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02544|Pfam:PF06966;Ontology_term=GO:0016021,GO:0005737,GO:0006629,GO:0016627 LTnewLM_25 Pfam protein_match 699831 700262 . - . Parent=LTnewLM_250024200.1:pep;Name=PF02544;signature_desc=3-oxo-5-alpha-steroid 4-dehydrogenase;Ontology_term=GO:0016627,GO:0006629,GO:0005737,GO:0016021 LTnewLM_25 Pfam protein_match 699927 700214 . - . Parent=LTnewLM_250024200.1:pep;Name=PF06966;signature_desc=Protein of unknown function (DUF1295) ### LTnewLM_25 AUGUSTUS gene 701542 704139 1 - . ID=LTnewLM_250024300 LTnewLM_25 AUGUSTUS mRNA 701542 704139 1 - . ID=LTnewLM_250024300.1;Parent=LTnewLM_250024300 LTnewLM_25 AUGUSTUS CDS 701542 704139 1 - 0 ID=LTnewLM_250024300.1:CDS:1;Parent=LTnewLM_250024300.1 ### LTnewLM_25 . polypeptide 701542 704139 . - . ID=LTnewLM_250024300.1:pep;Derives_from=LTnewLM_250024300.1;orthologous_to=LmjF.25.1780_mRNA,LmjF.26.2560_mRNA;ortholog_cluster=OG0000398;product=term%3DD-ala D-ala ligase C-terminus/SET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07478|Pfam:PF00856;Ontology_term=GO:0008716,GO:0005515 LTnewLM_25 Pfam protein_match 701908 702009 . - . Parent=LTnewLM_250024300.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 702340 702876 . - . Parent=LTnewLM_250024300.1:pep;Name=PF07478;signature_desc=D-ala D-ala ligase C-terminus;Ontology_term=GO:0008716 ### LTnewLM_25 AUGUSTUS gene 705243 706145 1 - . ID=LTnewLM_250024400 LTnewLM_25 AUGUSTUS mRNA 705243 706145 1 - . ID=LTnewLM_250024400.1;Parent=LTnewLM_250024400 LTnewLM_25 AUGUSTUS CDS 705243 706145 1 - 0 ID=LTnewLM_250024400.1:CDS:1;Parent=LTnewLM_250024400.1 ### LTnewLM_25 . polypeptide 705243 706145 . - . ID=LTnewLM_250024400.1:pep;Derives_from=LTnewLM_250024400.1;orthologous_to=LmjF.25.1790_mRNA;ortholog_cluster=OG0002919;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 706908 710006 1 - . ID=LTnewLM_250024500 LTnewLM_25 AUGUSTUS mRNA 706908 710006 1 - . ID=LTnewLM_250024500.1;Parent=LTnewLM_250024500 LTnewLM_25 AUGUSTUS CDS 706908 710006 1 - 0 ID=LTnewLM_250024500.1:CDS:1;Parent=LTnewLM_250024500.1 ### LTnewLM_25 . polypeptide 706908 710006 . - . ID=LTnewLM_250024500.1:pep;Derives_from=LTnewLM_250024500.1;orthologous_to=LmjF.25.1800_mRNA;ortholog_cluster=OG0002920;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 711596 712444 1 - . ID=LTnewLM_250024600 LTnewLM_25 AUGUSTUS mRNA 711596 712444 1 - . ID=LTnewLM_250024600.1;Parent=LTnewLM_250024600 LTnewLM_25 AUGUSTUS CDS 711596 712444 1 - 0 ID=LTnewLM_250024600.1:CDS:1;Parent=LTnewLM_250024600.1 ### LTnewLM_25 . polypeptide 711596 712444 . - . ID=LTnewLM_250024600.1:pep;Derives_from=LTnewLM_250024600.1;orthologous_to=LmjF.25.1810_mRNA;ortholog_cluster=OG0002921;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 714694 717191 0.86 - . ID=LTnewLM_250024700 LTnewLM_25 AUGUSTUS mRNA 714694 717191 0.86 - . ID=LTnewLM_250024700.1;Parent=LTnewLM_250024700 LTnewLM_25 AUGUSTUS CDS 714694 714993 0.86 - 0 ID=LTnewLM_250024700.1:CDS:1;Parent=LTnewLM_250024700.1 LTnewLM_25 AUGUSTUS CDS 715056 717191 0.98 - 0 ID=LTnewLM_250024700.1:CDS:2;Parent=LTnewLM_250024700.1 ### LTnewLM_25 . polypeptide 714694 717191 . - . ID=LTnewLM_250024700.1:pep;Derives_from=LTnewLM_250024700.1;orthologous_to=LmjF.25.1820_mRNA;ortholog_cluster=OG0002922;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 719070 722057 1 - . ID=LTnewLM_250024800 LTnewLM_25 AUGUSTUS mRNA 719070 722057 1 - . ID=LTnewLM_250024800.1;Parent=LTnewLM_250024800 LTnewLM_25 AUGUSTUS CDS 719070 722057 1 - 0 ID=LTnewLM_250024800.1:CDS:1;Parent=LTnewLM_250024800.1 ### LTnewLM_25 . polypeptide 719070 722057 . - . ID=LTnewLM_250024800.1:pep;Derives_from=LTnewLM_250024800.1;orthologous_to=LmjF.25.1830_mRNA;ortholog_cluster=OG0002923;product=term%3DHistone RNA hairpin-binding protein RNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15247;Ontology_term=GO:0003723 LTnewLM_25 Pfam protein_match 720390 720602 . - . Parent=LTnewLM_250024800.1:pep;Name=PF15247;signature_desc=Histone RNA hairpin-binding protein RNA-binding domain;Ontology_term=GO:0003723 ### LTnewLM_25 AUGUSTUS gene 724694 726592 1 - . ID=LTnewLM_250024900 LTnewLM_25 AUGUSTUS mRNA 724694 726592 1 - . ID=LTnewLM_250024900.1;Parent=LTnewLM_250024900 LTnewLM_25 AUGUSTUS CDS 724694 726592 1 - 0 ID=LTnewLM_250024900.1:CDS:1;Parent=LTnewLM_250024900.1 ### LTnewLM_25 . polypeptide 724694 726592 . - . ID=LTnewLM_250024900.1:pep;Derives_from=LTnewLM_250024900.1;orthologous_to=LmjF.25.1840_mRNA;ortholog_cluster=OG0002924;product=term%3DNot1 N-terminal domain%2C CCR4-Not complex component/NOT2 / NOT3 / NOT5 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04065|Pfam:PF04153;Ontology_term=GO:0005634,GO:0006355 LTnewLM_25 Pfam protein_match 724715 725095 . - . Parent=LTnewLM_250024900.1:pep;Name=PF04153;signature_desc=NOT2 / NOT3 / NOT5 family;Ontology_term=GO:0006355,GO:0005634 LTnewLM_25 Pfam protein_match 725930 726580 . - . Parent=LTnewLM_250024900.1:pep;Name=PF04065;signature_desc=Not1 N-terminal domain%2C CCR4-Not complex component;Ontology_term=GO:0006355,GO:0005634 ### LTnewLM_25 AUGUSTUS gene 727647 729212 1 - . ID=LTnewLM_250025000 LTnewLM_25 AUGUSTUS mRNA 727647 729212 1 - . ID=LTnewLM_250025000.1;Parent=LTnewLM_250025000 LTnewLM_25 AUGUSTUS CDS 727647 729212 1 - 0 ID=LTnewLM_250025000.1:CDS:1;Parent=LTnewLM_250025000.1 ### LTnewLM_25 . polypeptide 727647 729212 . - . ID=LTnewLM_250025000.1:pep;Derives_from=LTnewLM_250025000.1;orthologous_to=LmjF.25.1850_mRNA;ortholog_cluster=OG0002925;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 727782 727886 . - . Parent=LTnewLM_250025000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 728061 728171 . - . Parent=LTnewLM_250025000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 728325 728435 . - . Parent=LTnewLM_250025000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 729917 731224 1 - . ID=LTnewLM_250025100 LTnewLM_25 AUGUSTUS mRNA 729917 731224 1 - . ID=LTnewLM_250025100.1;Parent=LTnewLM_250025100 LTnewLM_25 AUGUSTUS CDS 729917 731224 1 - 0 ID=LTnewLM_250025100.1:CDS:1;Parent=LTnewLM_250025100.1 ### LTnewLM_25 . polypeptide 729917 731224 . - . ID=LTnewLM_250025100.1:pep;Derives_from=LTnewLM_250025100.1;orthologous_to=LmjF.25.1860_mRNA;ortholog_cluster=OG0002926;product=term%3DTPM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04536 LTnewLM_25 Pfam protein_match 730535 730900 . - . Parent=LTnewLM_250025100.1:pep;Name=PF04536;signature_desc=TPM domain ### LTnewLM_25 . polypeptide 731977 733116 . - . ID=LTnewLM_250025200.1:pep;Derives_from=LTnewLM_250025200.1;orthologous_to=LmjF.25.1870.1_mRNA,LmjF.25.1870.2_mRNA;ortholog_cluster=OG0000526;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . polypeptide 731977 733553 . - . ID=LTnewLM_250025200.2:pep;Derives_from=LTnewLM_250025200.2;product=term%3Dhypothetical protein ### LTnewLM_25 . pseudogene 731977 734604 . - . ID=LTnewLM_250025200:pseudogene;coverage=0.992;sequence_ID=0.919;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.1870_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 731977 733178 . - . ID=LTnewLM_250025200.1;Parent=LTnewLM_250025200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 731977 733116 . - . ID=LTnewLM_250025200.1:pseudogenic_exon:1;Parent=LTnewLM_250025200.1;extra_copy_number=0 LTnewLM_25 . pseudogenic_transcript 731977 734604 . - . ID=LTnewLM_250025200.2;Parent=LTnewLM_250025200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 731977 733553 . - . ID=LTnewLM_250025200.2:pseudogenic_exon:1;Parent=LTnewLM_250025200.2;extra_copy_number=0 ### LTnewLM_25 AUGUSTUS gene 735507 735926 1 - . ID=LTnewLM_250025300 LTnewLM_25 AUGUSTUS mRNA 735507 735926 1 - . ID=LTnewLM_250025300.1;Parent=LTnewLM_250025300 LTnewLM_25 AUGUSTUS CDS 735507 735926 1 - 0 ID=LTnewLM_250025300.1:CDS:1;Parent=LTnewLM_250025300.1 ### LTnewLM_25 . polypeptide 735507 735926 . - . ID=LTnewLM_250025300.1:pep;Derives_from=LTnewLM_250025300.1;orthologous_to=LmjF.25.1880_mRNA;ortholog_cluster=OG0002927;product=term%3DVacuolar protein sorting 55%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04133 LTnewLM_25 Pfam protein_match 735558 735908 . - . Parent=LTnewLM_250025300.1:pep;Name=PF04133;signature_desc=Vacuolar protein sorting 55 ### LTnewLM_25 AUGUSTUS gene 736893 737555 1 - . ID=LTnewLM_250025400 LTnewLM_25 AUGUSTUS mRNA 736893 737555 1 - . ID=LTnewLM_250025400.1;Parent=LTnewLM_250025400 LTnewLM_25 AUGUSTUS CDS 736893 737555 1 - 0 ID=LTnewLM_250025400.1:CDS:1;Parent=LTnewLM_250025400.1 ### LTnewLM_25 . polypeptide 736893 737555 . - . ID=LTnewLM_250025400.1:pep;Derives_from=LTnewLM_250025400.1;orthologous_to=LmjF.25.1890_mRNA;ortholog_cluster=OG0002928;product=term%3DProteasome assembly chaperone 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10178 LTnewLM_25 Pfam protein_match 736992 737138 . - . Parent=LTnewLM_250025400.1:pep;Name=PF10178;signature_desc=Proteasome assembly chaperone 3 ### LTnewLM_25 AUGUSTUS gene 738240 739412 1 - . ID=LTnewLM_250025500 LTnewLM_25 AUGUSTUS mRNA 738240 739412 1 - . ID=LTnewLM_250025500.1;Parent=LTnewLM_250025500 LTnewLM_25 AUGUSTUS CDS 738240 739412 1 - 0 ID=LTnewLM_250025500.1:CDS:1;Parent=LTnewLM_250025500.1 ### LTnewLM_25 . polypeptide 738240 739412 . - . ID=LTnewLM_250025500.1:pep;Derives_from=LTnewLM_250025500.1;orthologous_to=LmjF.25.1900_mRNA;ortholog_cluster=OG0002929;product=term%3DDNA / pantothenate metabolism flavoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04127 LTnewLM_25 Pfam protein_match 738372 738689 . - . Parent=LTnewLM_250025500.1:pep;Name=PF04127;signature_desc=DNA / pantothenate metabolism flavoprotein LTnewLM_25 Pfam protein_match 738894 739106 . - . Parent=LTnewLM_250025500.1:pep;Name=PF04127;signature_desc=DNA / pantothenate metabolism flavoprotein ### LTnewLM_25 AUGUSTUS gene 739749 740789 1 - . ID=LTnewLM_250025600 LTnewLM_25 AUGUSTUS mRNA 739749 740789 1 - . ID=LTnewLM_250025600.1;Parent=LTnewLM_250025600 LTnewLM_25 AUGUSTUS CDS 739749 740789 1 - 0 ID=LTnewLM_250025600.1:CDS:1;Parent=LTnewLM_250025600.1 ### LTnewLM_25 . polypeptide 739749 740789 . - . ID=LTnewLM_250025600.1:pep;Derives_from=LTnewLM_250025600.1;orthologous_to=LmjF.25.1910_mRNA;ortholog_cluster=OG0002930;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 741551 743035 1 - . ID=LTnewLM_250025700 LTnewLM_25 AUGUSTUS mRNA 741551 743035 1 - . ID=LTnewLM_250025700.1;Parent=LTnewLM_250025700 LTnewLM_25 AUGUSTUS CDS 741551 743035 1 - 0 ID=LTnewLM_250025700.1:CDS:1;Parent=LTnewLM_250025700.1 ### LTnewLM_25 . polypeptide 741551 743035 . - . ID=LTnewLM_250025700.1:pep;Derives_from=LTnewLM_250025700.1;orthologous_to=LmjF.25.1920_mRNA;ortholog_cluster=OG0002931;product=term%3DMalT-like TPR region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17874 LTnewLM_25 Pfam protein_match 741725 742114 . - . Parent=LTnewLM_250025700.1:pep;Name=PF17874;signature_desc=MalT-like TPR region ### LTnewLM_25 AUGUSTUS gene 743755 744450 1 - . ID=LTnewLM_250025800 LTnewLM_25 AUGUSTUS mRNA 743755 744450 1 - . ID=LTnewLM_250025800.1;Parent=LTnewLM_250025800 LTnewLM_25 AUGUSTUS CDS 743755 744450 1 - 0 ID=LTnewLM_250025800.1:CDS:1;Parent=LTnewLM_250025800.1 ### LTnewLM_25 . polypeptide 743755 744450 . - . ID=LTnewLM_250025800.1:pep;Derives_from=LTnewLM_250025800.1;orthologous_to=LmjF.25.1930_mRNA;ortholog_cluster=OG0002932;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 744953 746944 1 - . ID=LTnewLM_250025900 LTnewLM_25 AUGUSTUS mRNA 744953 746944 1 - . ID=LTnewLM_250025900.1;Parent=LTnewLM_250025900 LTnewLM_25 AUGUSTUS CDS 744953 746944 1 - 0 ID=LTnewLM_250025900.1:CDS:1;Parent=LTnewLM_250025900.1 ### LTnewLM_25 . polypeptide 744953 746944 . - . ID=LTnewLM_250025900.1:pep;Derives_from=LTnewLM_250025900.1;orthologous_to=LmjF.25.1940_mRNA;ortholog_cluster=OG0002933;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 747771 750971 1 - . ID=LTnewLM_250026000 LTnewLM_25 AUGUSTUS mRNA 747771 750971 1 - . ID=LTnewLM_250026000.1;Parent=LTnewLM_250026000 LTnewLM_25 AUGUSTUS CDS 747771 750971 1 - 0 ID=LTnewLM_250026000.1:CDS:1;Parent=LTnewLM_250026000.1 ### LTnewLM_25 . polypeptide 747771 750971 . - . ID=LTnewLM_250026000.1:pep;Derives_from=LTnewLM_250026000.1;orthologous_to=LmjF.25.1950_mRNA;ortholog_cluster=OG0002934;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_25 Pfam protein_match 750024 750869 . - . Parent=LTnewLM_250026000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_25 Pfam protein_match 750564 750878 . - . Parent=LTnewLM_250026000.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_25 AUGUSTUS gene 752110 752448 1 - . ID=LTnewLM_250026100 LTnewLM_25 AUGUSTUS mRNA 752110 752448 1 - . ID=LTnewLM_250026100.1;Parent=LTnewLM_250026100 LTnewLM_25 AUGUSTUS CDS 752110 752448 1 - 0 ID=LTnewLM_250026100.1:CDS:1;Parent=LTnewLM_250026100.1 ### LTnewLM_25 . polypeptide 752110 752448 . - . ID=LTnewLM_250026100.1:pep;Derives_from=LTnewLM_250026100.1;orthologous_to=LmjF.25.1960_mRNA;ortholog_cluster=OG0002935;product=term%3DAcylphosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00708 LTnewLM_25 Pfam protein_match 752197 752421 . - . Parent=LTnewLM_250026100.1:pep;Name=PF00708;signature_desc=Acylphosphatase ### LTnewLM_25 AUGUSTUS gene 753078 756266 1 - . ID=LTnewLM_250026200 LTnewLM_25 AUGUSTUS mRNA 753078 756266 1 - . ID=LTnewLM_250026200.1;Parent=LTnewLM_250026200 LTnewLM_25 AUGUSTUS CDS 753078 756266 1 - 0 ID=LTnewLM_250026200.1:CDS:1;Parent=LTnewLM_250026200.1 ### LTnewLM_25 . polypeptide 753078 756266 . - . ID=LTnewLM_250026200.1:pep;Derives_from=LTnewLM_250026200.1;orthologous_to=LmjF.25.1970_mRNA;ortholog_cluster=OG0002936;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_25 Pfam protein_match 754929 755882 . - . Parent=LTnewLM_250026200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_25 Pfam protein_match 755544 756020 . - . Parent=LTnewLM_250026200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_25 AUGUSTUS gene 757971 762407 1 - . ID=LTnewLM_250026300 LTnewLM_25 AUGUSTUS mRNA 757971 762407 1 - . ID=LTnewLM_250026300.1;Parent=LTnewLM_250026300 LTnewLM_25 AUGUSTUS CDS 757971 762407 1 - 0 ID=LTnewLM_250026300.1:CDS:1;Parent=LTnewLM_250026300.1 ### LTnewLM_25 . polypeptide 757971 762407 . - . ID=LTnewLM_250026300.1:pep;Derives_from=LTnewLM_250026300.1;orthologous_to=LmjF.25.1980_mRNA;ortholog_cluster=OG0002937;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 763899 765629 1 - . ID=LTnewLM_250026400 LTnewLM_25 AUGUSTUS mRNA 763899 765629 1 - . ID=LTnewLM_250026400.1;Parent=LTnewLM_250026400 LTnewLM_25 AUGUSTUS CDS 763899 765629 1 - 0 ID=LTnewLM_250026400.1:CDS:1;Parent=LTnewLM_250026400.1 ### LTnewLM_25 . polypeptide 763899 765629 . - . ID=LTnewLM_250026400.1:pep;Derives_from=LTnewLM_250026400.1;orthologous_to=LmjF.25.1990_mRNA;ortholog_cluster=OG0002938;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 764502 764762 . - . Parent=LTnewLM_250026400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 764517 764756 . - . Parent=LTnewLM_250026400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_25 Pfam protein_match 764994 765611 . - . Parent=LTnewLM_250026400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 765150 765617 . - . Parent=LTnewLM_250026400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_25 Liftoff gene 767223 771227 . - . ID=LTnewLM_250026500;coverage=0.998;sequence_ID=0.959;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.2000_0 LTnewLM_25 Liftoff mRNA 767223 771227 . - . ID=LTnewLM_250026500.1;Parent=LTnewLM_250026500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 767223 771227 . - 0 ID=LTnewLM_250026500.1:CDS:1;Parent=LTnewLM_250026500.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 767223 771227 . - . ID=LTnewLM_250026500.1:pep;Derives_from=LTnewLM_250026500.1;orthologous_to=LmjF.25.2000_mRNA;ortholog_cluster=OG0002939;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 773284 774123 1 - . ID=LTnewLM_250026600 LTnewLM_25 AUGUSTUS mRNA 773284 774123 1 - . ID=LTnewLM_250026600.1;Parent=LTnewLM_250026600 LTnewLM_25 AUGUSTUS CDS 773284 774123 1 - 0 ID=LTnewLM_250026600.1:CDS:1;Parent=LTnewLM_250026600.1 ### LTnewLM_25 . polypeptide 773284 774123 . - . ID=LTnewLM_250026600.1:pep;Derives_from=LTnewLM_250026600.1;orthologous_to=LmjF.25.2010_mRNA;ortholog_cluster=OG0002940;product=term%3DHpcH/HpaI aldolase/citrate lyase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03328;Ontology_term=GO:0003824 LTnewLM_25 Pfam protein_match 773380 774072 . - . Parent=LTnewLM_250026600.1:pep;Name=PF03328;signature_desc=HpcH/HpaI aldolase/citrate lyase family;Ontology_term=GO:0003824 ### LTnewLM_25 AUGUSTUS gene 775330 776247 1 - . ID=LTnewLM_250026700 LTnewLM_25 AUGUSTUS mRNA 775330 776247 1 - . ID=LTnewLM_250026700.1;Parent=LTnewLM_250026700 LTnewLM_25 AUGUSTUS CDS 775330 776247 1 - 0 ID=LTnewLM_250026700.1:CDS:1;Parent=LTnewLM_250026700.1 ### LTnewLM_25 . polypeptide 775330 776247 . - . ID=LTnewLM_250026700.1:pep;Derives_from=LTnewLM_250026700.1;orthologous_to=LmjF.25.2020_mRNA;ortholog_cluster=OG0002941;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 777366 778463 1 - . ID=LTnewLM_250026800 LTnewLM_25 AUGUSTUS mRNA 777366 778463 1 - . ID=LTnewLM_250026800.1;Parent=LTnewLM_250026800 LTnewLM_25 AUGUSTUS CDS 777366 778463 1 - 0 ID=LTnewLM_250026800.1:CDS:1;Parent=LTnewLM_250026800.1 ### LTnewLM_25 . polypeptide 777366 778463 . - . ID=LTnewLM_250026800.1:pep;Derives_from=LTnewLM_250026800.1;orthologous_to=LmjF.25.2030_mRNA;ortholog_cluster=OG0002942;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 777438 777920 . - . Parent=LTnewLM_250026800.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 780452 781603 1 - . ID=LTnewLM_250026900 LTnewLM_25 AUGUSTUS mRNA 780452 781603 1 - . ID=LTnewLM_250026900.1;Parent=LTnewLM_250026900 LTnewLM_25 AUGUSTUS CDS 780452 781603 1 - 0 ID=LTnewLM_250026900.1:CDS:1;Parent=LTnewLM_250026900.1 ### LTnewLM_25 . polypeptide 780452 781603 . - . ID=LTnewLM_250026900.1:pep;Derives_from=LTnewLM_250026900.1;orthologous_to=LmjF.25.2040_mRNA;ortholog_cluster=OG0002943;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 782902 786036 1 - . ID=LTnewLM_250027000 LTnewLM_25 AUGUSTUS mRNA 782902 786036 1 - . ID=LTnewLM_250027000.1;Parent=LTnewLM_250027000 LTnewLM_25 AUGUSTUS CDS 782902 786036 1 - 0 ID=LTnewLM_250027000.1:CDS:1;Parent=LTnewLM_250027000.1 ### LTnewLM_25 . polypeptide 782902 786036 . - . ID=LTnewLM_250027000.1:pep;Derives_from=LTnewLM_250027000.1;orthologous_to=LTnewLM_230017900.1,LmjF.25.2050_mRNA;ortholog_cluster=OG0000387;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_25 Pfam protein_match 783886 784224 . - . Parent=LTnewLM_250027000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_25 Pfam protein_match 784348 785097 . - . Parent=LTnewLM_250027000.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_25 Pfam protein_match 784672 785148 . - . Parent=LTnewLM_250027000.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_25 AUGUSTUS gene 787072 788181 1 - . ID=LTnewLM_250027100 LTnewLM_25 AUGUSTUS mRNA 787072 788181 1 - . ID=LTnewLM_250027100.1;Parent=LTnewLM_250027100 LTnewLM_25 AUGUSTUS CDS 787072 788181 1 - 0 ID=LTnewLM_250027100.1:CDS:1;Parent=LTnewLM_250027100.1 ### LTnewLM_25 . polypeptide 787072 788181 . - . ID=LTnewLM_250027100.1:pep;Derives_from=LTnewLM_250027100.1;orthologous_to=LmjF.25.2060_mRNA;ortholog_cluster=OG0002944;product=term%3DProtein phosphatase 2C/Stage II sporulation protein E (SpoIIE)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13672|Pfam:PF07228;Ontology_term=GO:0003824 LTnewLM_25 Pfam protein_match 787117 787869 . - . Parent=LTnewLM_250027100.1:pep;Name=PF07228;signature_desc=Stage II sporulation protein E (SpoIIE);Ontology_term=GO:0003824 LTnewLM_25 Pfam protein_match 787390 787902 . - . Parent=LTnewLM_250027100.1:pep;Name=PF13672;signature_desc=Protein phosphatase 2C ### LTnewLM_25 AUGUSTUS gene 788870 790498 1 - . ID=LTnewLM_250027200 LTnewLM_25 AUGUSTUS mRNA 788870 790498 1 - . ID=LTnewLM_250027200.1;Parent=LTnewLM_250027200 LTnewLM_25 AUGUSTUS CDS 788870 790498 1 - 0 ID=LTnewLM_250027200.1:CDS:1;Parent=LTnewLM_250027200.1 ### LTnewLM_25 . polypeptide 788870 790498 . - . ID=LTnewLM_250027200.1:pep;Derives_from=LTnewLM_250027200.1;orthologous_to=LmjF.25.2070_mRNA;ortholog_cluster=OG0002945;product=term%3DRieske [2Fe-2S] domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00355;Ontology_term=GO:0055114,GO:0016491,GO:0051537 LTnewLM_25 Pfam protein_match 790265 790471 . - . Parent=LTnewLM_250027200.1:pep;Name=PF00355;signature_desc=Rieske [2Fe-2S] domain;Ontology_term=GO:0016491,GO:0051537,GO:0055114 ### LTnewLM_25 AUGUSTUS gene 791954 794617 1 - . ID=LTnewLM_250027300 LTnewLM_25 AUGUSTUS mRNA 791954 794617 1 - . ID=LTnewLM_250027300.1;Parent=LTnewLM_250027300 LTnewLM_25 AUGUSTUS CDS 791954 794617 1 - 0 ID=LTnewLM_250027300.1:CDS:1;Parent=LTnewLM_250027300.1 ### LTnewLM_25 . polypeptide 791954 794617 . - . ID=LTnewLM_250027300.1:pep;Derives_from=LTnewLM_250027300.1;orthologous_to=LmjF.25.2080_mRNA;ortholog_cluster=OG0002946;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_25 Pfam protein_match 792125 792376 . - . Parent=LTnewLM_250027300.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_25 Pfam protein_match 792395 792580 . - . Parent=LTnewLM_250027300.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_25 Pfam protein_match 793202 793387 . - . Parent=LTnewLM_250027300.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_25 Pfam protein_match 793952 794569 . - . Parent=LTnewLM_250027300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_25 AUGUSTUS gene 795793 796263 1 - . ID=LTnewLM_250027400 LTnewLM_25 AUGUSTUS mRNA 795793 796263 1 - . ID=LTnewLM_250027400.1;Parent=LTnewLM_250027400 LTnewLM_25 AUGUSTUS CDS 795793 796263 1 - 0 ID=LTnewLM_250027400.1:CDS:1;Parent=LTnewLM_250027400.1 ### LTnewLM_25 . polypeptide 795793 796263 . - . ID=LTnewLM_250027400.1:pep;Derives_from=LTnewLM_250027400.1;orthologous_to=LmjF.25.2090_mRNA;ortholog_cluster=OG0002947;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 797101 797982 1 - . ID=LTnewLM_250027500 LTnewLM_25 AUGUSTUS mRNA 797101 797982 1 - . ID=LTnewLM_250027500.1;Parent=LTnewLM_250027500 LTnewLM_25 AUGUSTUS CDS 797101 797982 1 - 0 ID=LTnewLM_250027500.1:CDS:1;Parent=LTnewLM_250027500.1 ### LTnewLM_25 . polypeptide 797101 797982 . - . ID=LTnewLM_250027500.1:pep;Derives_from=LTnewLM_250027500.1;orthologous_to=LmjF.25.2095_mRNA;ortholog_cluster=OG0002948;product=term%3DmRNA capping enzyme%2C beta chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02940;Ontology_term=GO:0004651 LTnewLM_25 Pfam protein_match 797239 797643 . - . Parent=LTnewLM_250027500.1:pep;Name=PF02940;signature_desc=mRNA capping enzyme%2C beta chain;Ontology_term=GO:0004651 ### LTnewLM_25 AUGUSTUS gene 798682 799686 1 - . ID=LTnewLM_250027600 LTnewLM_25 AUGUSTUS mRNA 798682 799686 1 - . ID=LTnewLM_250027600.1;Parent=LTnewLM_250027600 LTnewLM_25 AUGUSTUS CDS 798682 799686 1 - 0 ID=LTnewLM_250027600.1:CDS:1;Parent=LTnewLM_250027600.1 ### LTnewLM_25 . polypeptide 798682 799686 . - . ID=LTnewLM_250027600.1:pep;Derives_from=LTnewLM_250027600.1;orthologous_to=LmjF.25.2100_mRNA;ortholog_cluster=OG0002949;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 798952 799050 . - . Parent=LTnewLM_250027600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 799471 799566 . - . Parent=LTnewLM_250027600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 800918 802723 1 - . ID=LTnewLM_250027700 LTnewLM_25 AUGUSTUS mRNA 800918 802723 1 - . ID=LTnewLM_250027700.1;Parent=LTnewLM_250027700 LTnewLM_25 AUGUSTUS CDS 800918 802723 1 - 0 ID=LTnewLM_250027700.1:CDS:1;Parent=LTnewLM_250027700.1 ### LTnewLM_25 . polypeptide 800918 802723 . - . ID=LTnewLM_250027700.1:pep;Derives_from=LTnewLM_250027700.1;orthologous_to=LmjF.25.2110_mRNA;ortholog_cluster=OG0002950;product=term%3DKIF-1 binding protein C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12309 LTnewLM_25 Pfam protein_match 800963 801946 . - . Parent=LTnewLM_250027700.1:pep;Name=PF12309;signature_desc=KIF-1 binding protein C terminal ### LTnewLM_25 AUGUSTUS gene 803971 804609 1 - . ID=LTnewLM_250027800 LTnewLM_25 AUGUSTUS mRNA 803971 804609 1 - . ID=LTnewLM_250027800.1;Parent=LTnewLM_250027800 LTnewLM_25 AUGUSTUS CDS 803971 804609 1 - 0 ID=LTnewLM_250027800.1:CDS:1;Parent=LTnewLM_250027800.1 ### LTnewLM_25 . polypeptide 803971 804609 . - . ID=LTnewLM_250027800.1:pep;Derives_from=LTnewLM_250027800.1;orthologous_to=LmjF.25.2120_mRNA;ortholog_cluster=OG0002951;product=term%3DTranslation initiation factor eIF3 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08597;Ontology_term=GO:0005737,GO:0005852,GO:0003743 LTnewLM_25 Pfam protein_match 804031 804567 . - . Parent=LTnewLM_250027800.1:pep;Name=PF08597;signature_desc=Translation initiation factor eIF3 subunit;Ontology_term=GO:0003743,GO:0005737,GO:0005852 ### LTnewLM_25 AUGUSTUS gene 805549 806448 1 - . ID=LTnewLM_250027900 LTnewLM_25 AUGUSTUS mRNA 805549 806448 1 - . ID=LTnewLM_250027900.1;Parent=LTnewLM_250027900 LTnewLM_25 AUGUSTUS CDS 805549 806448 1 - 0 ID=LTnewLM_250027900.1:CDS:1;Parent=LTnewLM_250027900.1 ### LTnewLM_25 . polypeptide 805549 806448 . - . ID=LTnewLM_250027900.1:pep;Derives_from=LTnewLM_250027900.1;orthologous_to=LTnewLM_250028000.1,LmjF.25.2130_mRNA,LmjF.25.2140_mRNA;ortholog_cluster=OG0000180;product=term%3DCoA binding domain/Succinyl-CoA ligase like flavodoxin domain/CoA-ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02629|Pfam:PF13607|Pfam:PF00549;Ontology_term=GO:0003824,GO:0008152,GO:0048037 LTnewLM_25 Pfam protein_match 805597 805995 . - . Parent=LTnewLM_250027900.1:pep;Name=PF13607;signature_desc=Succinyl-CoA ligase like flavodoxin domain LTnewLM_25 Pfam protein_match 805615 805977 . - . Parent=LTnewLM_250027900.1:pep;Name=PF00549;signature_desc=CoA-ligase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_25 Pfam protein_match 806137 806415 . - . Parent=LTnewLM_250027900.1:pep;Name=PF02629;signature_desc=CoA binding domain;Ontology_term=GO:0048037 ### LTnewLM_25 AUGUSTUS gene 809715 810614 1 - . ID=LTnewLM_250028000 LTnewLM_25 AUGUSTUS mRNA 809715 810614 1 - . ID=LTnewLM_250028000.1;Parent=LTnewLM_250028000 LTnewLM_25 AUGUSTUS CDS 809715 810614 1 - 0 ID=LTnewLM_250028000.1:CDS:1;Parent=LTnewLM_250028000.1 ### LTnewLM_25 . polypeptide 809715 810614 . - . ID=LTnewLM_250028000.1:pep;Derives_from=LTnewLM_250028000.1;orthologous_to=LTnewLM_250027900.1,LmjF.25.2130_mRNA,LmjF.25.2140_mRNA;ortholog_cluster=OG0000180;product=term%3DCoA binding domain/Succinyl-CoA ligase like flavodoxin domain/CoA-ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02629|Pfam:PF13607|Pfam:PF00549;Ontology_term=GO:0003824,GO:0008152,GO:0048037 LTnewLM_25 Pfam protein_match 809763 810161 . - . Parent=LTnewLM_250028000.1:pep;Name=PF13607;signature_desc=Succinyl-CoA ligase like flavodoxin domain LTnewLM_25 Pfam protein_match 809781 810143 . - . Parent=LTnewLM_250028000.1:pep;Name=PF00549;signature_desc=CoA-ligase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_25 Pfam protein_match 810303 810581 . - . Parent=LTnewLM_250028000.1:pep;Name=PF02629;signature_desc=CoA binding domain;Ontology_term=GO:0048037 ### LTnewLM_25 AUGUSTUS gene 811909 813123 1 - . ID=LTnewLM_250028100 LTnewLM_25 AUGUSTUS mRNA 811909 813123 1 - . ID=LTnewLM_250028100.1;Parent=LTnewLM_250028100 LTnewLM_25 AUGUSTUS CDS 811909 813123 1 - 0 ID=LTnewLM_250028100.1:CDS:1;Parent=LTnewLM_250028100.1 ### LTnewLM_25 . polypeptide 811909 813123 . - . ID=LTnewLM_250028100.1:pep;Derives_from=LTnewLM_250028100.1;orthologous_to=LmjF.25.2150_mRNA;ortholog_cluster=OG0002952;product=term%3DBRO1-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03097 LTnewLM_25 Pfam protein_match 811981 813084 . - . Parent=LTnewLM_250028100.1:pep;Name=PF03097;signature_desc=BRO1-like domain ### LTnewLM_25 Liftoff gene 813616 814371 . - . ID=LTnewLM_250028200;coverage=1.0;sequence_ID=0.915;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.25.2155_0 LTnewLM_25 Liftoff mRNA 813616 814371 . - . ID=LTnewLM_250028200.1;Parent=LTnewLM_250028200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_25 Liftoff CDS 813616 814371 . - 0 ID=LTnewLM_250028200.1:CDS:1;Parent=LTnewLM_250028200.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 813616 814371 . - . ID=LTnewLM_250028200.1:pep;Derives_from=LTnewLM_250028200.1;orthologous_to=LmjF.25.2155_mRNA;ortholog_cluster=OG0002953;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 814829 815539 1 - . ID=LTnewLM_250028300 LTnewLM_25 AUGUSTUS mRNA 814829 815539 1 - . ID=LTnewLM_250028300.1;Parent=LTnewLM_250028300 LTnewLM_25 AUGUSTUS CDS 814829 815539 1 - 0 ID=LTnewLM_250028300.1:CDS:1;Parent=LTnewLM_250028300.1 ### LTnewLM_25 . polypeptide 814829 815539 . - . ID=LTnewLM_250028300.1:pep;Derives_from=LTnewLM_250028300.1;orthologous_to=LmjF.25.2160_mRNA;ortholog_cluster=OG0002954;product=term%3DUbiquitin-2 like Rad60 SUMO-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976 LTnewLM_25 Pfam protein_match 815039 815221 . - . Parent=LTnewLM_250028300.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like ### LTnewLM_25 AUGUSTUS gene 816908 818245 1 + . ID=LTnewLM_250028400 LTnewLM_25 AUGUSTUS mRNA 816908 818245 1 + . ID=LTnewLM_250028400.1;Parent=LTnewLM_250028400 LTnewLM_25 AUGUSTUS CDS 816908 818245 1 + 0 ID=LTnewLM_250028400.1:CDS:1;Parent=LTnewLM_250028400.1 ### LTnewLM_25 . polypeptide 816908 818245 . + . ID=LTnewLM_250028400.1:pep;Derives_from=LTnewLM_250028400.1;orthologous_to=LmjF.25.2170_mRNA;ortholog_cluster=OG0002955;product=term%3DN-terminal beta-sandwich domain of polyadenylation factor/mRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16573|Pfam:PF16575 LTnewLM_25 Pfam protein_match 816965 817273 . + . Parent=LTnewLM_250028400.1:pep;Name=PF16573;signature_desc=N-terminal beta-sandwich domain of polyadenylation factor LTnewLM_25 Pfam protein_match 817316 817786 . + . Parent=LTnewLM_250028400.1:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop ### LTnewLM_25 AUGUSTUS gene 818642 820435 1 + . ID=LTnewLM_250028500 LTnewLM_25 AUGUSTUS mRNA 818642 820435 1 + . ID=LTnewLM_250028500.1;Parent=LTnewLM_250028500 LTnewLM_25 AUGUSTUS CDS 818642 820435 1 + 0 ID=LTnewLM_250028500.1:CDS:1;Parent=LTnewLM_250028500.1 ### LTnewLM_25 . polypeptide 818642 820435 . + . ID=LTnewLM_250028500.1:pep;Derives_from=LTnewLM_250028500.1;orthologous_to=LmjF.25.2180_mRNA;ortholog_cluster=OG0002956;product=term%3DSec1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00995;Ontology_term=GO:0016192,GO:0006904 LTnewLM_25 Pfam protein_match 818819 820405 . + . Parent=LTnewLM_250028500.1:pep;Name=PF00995;signature_desc=Sec1 family;Ontology_term=GO:0006904,GO:0016192 ### LTnewLM_25 AUGUSTUS gene 820774 821907 1 + . ID=LTnewLM_250028600 LTnewLM_25 AUGUSTUS mRNA 820774 821907 1 + . ID=LTnewLM_250028600.1;Parent=LTnewLM_250028600 LTnewLM_25 AUGUSTUS CDS 820774 821907 1 + 0 ID=LTnewLM_250028600.1:CDS:1;Parent=LTnewLM_250028600.1 ### LTnewLM_25 . polypeptide 820774 821907 . + . ID=LTnewLM_250028600.1:pep;Derives_from=LTnewLM_250028600.1;orthologous_to=LmjF.25.2190_mRNA;ortholog_cluster=OG0002957;product=term%3DDnaJ domain/Zinc-finger of C2H2 type/Zinc-finger double-stranded RNA-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF12874|Pfam:PF12171 LTnewLM_25 Pfam protein_match 820798 820983 . + . Parent=LTnewLM_250028600.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_25 Pfam protein_match 821737 821808 . + . Parent=LTnewLM_250028600.1:pep;Name=PF12874;signature_desc=Zinc-finger of C2H2 type LTnewLM_25 Pfam protein_match 821737 821811 . + . Parent=LTnewLM_250028600.1:pep;Name=PF12171;signature_desc=Zinc-finger double-stranded RNA-binding ### LTnewLM_25 AUGUSTUS gene 822743 823675 1 + . ID=LTnewLM_250028700 LTnewLM_25 AUGUSTUS mRNA 822743 823675 1 + . ID=LTnewLM_250028700.1;Parent=LTnewLM_250028700 LTnewLM_25 AUGUSTUS CDS 822743 823675 1 + 0 ID=LTnewLM_250028700.1:CDS:1;Parent=LTnewLM_250028700.1 ### LTnewLM_25 . polypeptide 822743 823675 . + . ID=LTnewLM_250028700.1:pep;Derives_from=LTnewLM_250028700.1;orthologous_to=LmjF.25.2200_mRNA;ortholog_cluster=OG0002958;product=term%3DParkin co-regulated protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10274 LTnewLM_25 Pfam protein_match 823103 823654 . + . Parent=LTnewLM_250028700.1:pep;Name=PF10274;signature_desc=Parkin co-regulated protein ### LTnewLM_25 AUGUSTUS gene 825318 826631 1 + . ID=LTnewLM_250028800 LTnewLM_25 AUGUSTUS mRNA 825318 826631 1 + . ID=LTnewLM_250028800.1;Parent=LTnewLM_250028800 LTnewLM_25 AUGUSTUS CDS 825318 826631 1 + 0 ID=LTnewLM_250028800.1:CDS:1;Parent=LTnewLM_250028800.1 ### LTnewLM_25 . polypeptide 825318 826631 . + . ID=LTnewLM_250028800.1:pep;Derives_from=LTnewLM_250028800.1;orthologous_to=LmjF.25.2210_mRNA;ortholog_cluster=OG0002959;product=term%3DPCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01399;Ontology_term=GO:0005515 LTnewLM_25 Pfam protein_match 826239 826547 . + . Parent=LTnewLM_250028800.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 ### LTnewLM_25 AUGUSTUS gene 827519 829432 1 + . ID=LTnewLM_250028900 LTnewLM_25 AUGUSTUS mRNA 827519 829432 1 + . ID=LTnewLM_250028900.1;Parent=LTnewLM_250028900 LTnewLM_25 AUGUSTUS CDS 827519 829432 1 + 0 ID=LTnewLM_250028900.1:CDS:1;Parent=LTnewLM_250028900.1 ### LTnewLM_25 . polypeptide 827519 829432 . + . ID=LTnewLM_250028900.1:pep;Derives_from=LTnewLM_250028900.1;orthologous_to=LmjF.25.2220_mRNA;ortholog_cluster=OG0002960;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 830425 831417 1 + . ID=LTnewLM_250029000 LTnewLM_25 AUGUSTUS mRNA 830425 831417 1 + . ID=LTnewLM_250029000.1;Parent=LTnewLM_250029000 LTnewLM_25 AUGUSTUS CDS 830425 831417 1 + 0 ID=LTnewLM_250029000.1:CDS:1;Parent=LTnewLM_250029000.1 ### LTnewLM_25 . polypeptide 830425 831417 . + . ID=LTnewLM_250029000.1:pep;Derives_from=LTnewLM_250029000.1;orthologous_to=LmjF.25.2230_mRNA;ortholog_cluster=OG0002961;product=term%3DPex2 / Pex12 amino terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04757 LTnewLM_25 Pfam protein_match 830572 831204 . + . Parent=LTnewLM_250029000.1:pep;Name=PF04757;signature_desc=Pex2 / Pex12 amino terminal region ### LTnewLM_25 AUGUSTUS gene 832234 832746 1 + . ID=LTnewLM_250029100 LTnewLM_25 AUGUSTUS mRNA 832234 832746 1 + . ID=LTnewLM_250029100.1;Parent=LTnewLM_250029100 LTnewLM_25 AUGUSTUS CDS 832234 832746 1 + 0 ID=LTnewLM_250029100.1:CDS:1;Parent=LTnewLM_250029100.1 ### LTnewLM_25 . polypeptide 832234 832746 . + . ID=LTnewLM_250029100.1:pep;Derives_from=LTnewLM_250029100.1;orthologous_to=LmjF.25.2235_mRNA;ortholog_cluster=OG0002962;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 833505 835103 1 + . ID=LTnewLM_250029200 LTnewLM_25 AUGUSTUS mRNA 833505 835103 1 + . ID=LTnewLM_250029200.1;Parent=LTnewLM_250029200 LTnewLM_25 AUGUSTUS CDS 833505 835103 1 + 0 ID=LTnewLM_250029200.1:CDS:1;Parent=LTnewLM_250029200.1 ### LTnewLM_25 . polypeptide 833505 835103 . + . ID=LTnewLM_250029200.1:pep;Derives_from=LTnewLM_250029200.1;orthologous_to=LmjF.25.2240_mRNA;ortholog_cluster=OG0002963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 835995 836396 1 + . ID=LTnewLM_250029300 LTnewLM_25 AUGUSTUS mRNA 835995 836396 1 + . ID=LTnewLM_250029300.1;Parent=LTnewLM_250029300 LTnewLM_25 AUGUSTUS CDS 835995 836396 1 + 0 ID=LTnewLM_250029300.1:CDS:1;Parent=LTnewLM_250029300.1 ### LTnewLM_25 . polypeptide 835995 836396 . + . ID=LTnewLM_250029300.1:pep;Derives_from=LTnewLM_250029300.1;orthologous_to=LmjF.25.2250_mRNA;ortholog_cluster=OG0002964;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 837691 838062 1 + . ID=LTnewLM_250029400 LTnewLM_25 AUGUSTUS mRNA 837691 838062 1 + . ID=LTnewLM_250029400.1;Parent=LTnewLM_250029400 LTnewLM_25 AUGUSTUS CDS 837691 838062 1 + 0 ID=LTnewLM_250029400.1:CDS:1;Parent=LTnewLM_250029400.1 ### LTnewLM_25 . polypeptide 837691 838062 . + . ID=LTnewLM_250029400.1:pep;Derives_from=LTnewLM_250029400.1;orthologous_to=LmjF.25.2260_mRNA;ortholog_cluster=OG0002965;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 839195 840559 1 + . ID=LTnewLM_250029500 LTnewLM_25 AUGUSTUS mRNA 839195 840559 1 + . ID=LTnewLM_250029500.1;Parent=LTnewLM_250029500 LTnewLM_25 AUGUSTUS CDS 839195 840559 1 + 0 ID=LTnewLM_250029500.1:CDS:1;Parent=LTnewLM_250029500.1 ### LTnewLM_25 . polypeptide 839195 840559 . + . ID=LTnewLM_250029500.1:pep;Derives_from=LTnewLM_250029500.1;orthologous_to=LmjF.25.2270_mRNA;ortholog_cluster=OG0002966;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 842567 843550 1 + . ID=LTnewLM_250029600 LTnewLM_25 AUGUSTUS mRNA 842567 843550 1 + . ID=LTnewLM_250029600.1;Parent=LTnewLM_250029600 LTnewLM_25 AUGUSTUS CDS 842567 843550 1 + 0 ID=LTnewLM_250029600.1:CDS:1;Parent=LTnewLM_250029600.1 ### LTnewLM_25 . polypeptide 842567 843550 . + . ID=LTnewLM_250029600.1:pep;Derives_from=LTnewLM_250029600.1;orthologous_to=LmjF.25.2280_mRNA;ortholog_cluster=OG0002967;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_25 Pfam protein_match 842909 843319 . + . Parent=LTnewLM_250029600.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_25 AUGUSTUS gene 845621 846511 1 + . ID=LTnewLM_250029700 LTnewLM_25 AUGUSTUS mRNA 845621 846511 1 + . ID=LTnewLM_250029700.1;Parent=LTnewLM_250029700 LTnewLM_25 AUGUSTUS CDS 845621 846511 1 + 0 ID=LTnewLM_250029700.1:CDS:1;Parent=LTnewLM_250029700.1 ### LTnewLM_25 . polypeptide 845621 846511 . + . ID=LTnewLM_250029700.1:pep;Derives_from=LTnewLM_250029700.1;orthologous_to=LmjF.25.2290_mRNA;ortholog_cluster=OG0002968;product=term%3DPex2 / Pex12 amino terminal region/Zinc finger%2C C3HC4 type (RING finger)/Ring finger domain/zinc-RING finger domain/Anaphase-promoting complex subunit 11 RING-H2 finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04757|Pfam:PF13920|Pfam:PF13639|Pfam:PF14634|Pfam:PF00097|Pfam:PF12861;Ontology_term=GO:0008270,GO:0005680,GO:0005515,GO:0046872,GO:0004842 LTnewLM_25 Pfam protein_match 845729 845953 . + . Parent=LTnewLM_250029700.1:pep;Name=PF04757;signature_desc=Pex2 / Pex12 amino terminal region LTnewLM_25 Pfam protein_match 846275 846415 . + . Parent=LTnewLM_250029700.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_25 Pfam protein_match 846278 846403 . + . Parent=LTnewLM_250029700.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_25 Pfam protein_match 846278 846406 . + . Parent=LTnewLM_250029700.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_25 Pfam protein_match 846281 846400 . + . Parent=LTnewLM_250029700.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_25 Pfam protein_match 846281 846421 . + . Parent=LTnewLM_250029700.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 ### LTnewLM_25 AUGUSTUS gene 847440 849431 1 + . ID=LTnewLM_250029800 LTnewLM_25 AUGUSTUS mRNA 847440 849431 1 + . ID=LTnewLM_250029800.1;Parent=LTnewLM_250029800 LTnewLM_25 AUGUSTUS CDS 847440 849431 1 + 0 ID=LTnewLM_250029800.1:CDS:1;Parent=LTnewLM_250029800.1 ### LTnewLM_25 . polypeptide 847440 849431 . + . ID=LTnewLM_250029800.1:pep;Derives_from=LTnewLM_250029800.1;orthologous_to=LmjF.25.2300_mRNA;ortholog_cluster=OG0002969;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 850427 852151 1 + . ID=LTnewLM_250029900 LTnewLM_25 AUGUSTUS mRNA 850427 852151 1 + . ID=LTnewLM_250029900.1;Parent=LTnewLM_250029900 LTnewLM_25 AUGUSTUS CDS 850427 852151 1 + 0 ID=LTnewLM_250029900.1:CDS:1;Parent=LTnewLM_250029900.1 ### LTnewLM_25 . polypeptide 850427 852151 . + . ID=LTnewLM_250029900.1:pep;Derives_from=LTnewLM_250029900.1;orthologous_to=LmjF.25.2310_mRNA;ortholog_cluster=OG0002970;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 853119 853556 1 + . ID=LTnewLM_250030000 LTnewLM_25 AUGUSTUS mRNA 853119 853556 1 + . ID=LTnewLM_250030000.1;Parent=LTnewLM_250030000 LTnewLM_25 AUGUSTUS CDS 853119 853556 1 + 0 ID=LTnewLM_250030000.1:CDS:1;Parent=LTnewLM_250030000.1 ### LTnewLM_25 . polypeptide 853119 853556 . + . ID=LTnewLM_250030000.1:pep;Derives_from=LTnewLM_250030000.1;orthologous_to=LmjF.25.2320_mRNA;ortholog_cluster=OG0002971;product=term%3DMicrosomal signal peptidase 12 kDa subunit (SPC12)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06645;Ontology_term=GO:0005787,GO:0006465,GO:0008233,GO:0016021 LTnewLM_25 Pfam protein_match 853227 853382 . + . Parent=LTnewLM_250030000.1:pep;Name=PF06645;signature_desc=Microsomal signal peptidase 12 kDa subunit (SPC12);Ontology_term=GO:0008233,GO:0006465,GO:0005787,GO:0016021 ### LTnewLM_25 AUGUSTUS gene 854517 857030 1 + . ID=LTnewLM_250030100 LTnewLM_25 AUGUSTUS mRNA 854517 857030 1 + . ID=LTnewLM_250030100.1;Parent=LTnewLM_250030100 LTnewLM_25 AUGUSTUS CDS 854517 857030 1 + 0 ID=LTnewLM_250030100.1:CDS:1;Parent=LTnewLM_250030100.1 ### LTnewLM_25 . polypeptide 854517 857030 . + . ID=LTnewLM_250030100.1:pep;Derives_from=LTnewLM_250030100.1;orthologous_to=LmjF.25.2330_mRNA;ortholog_cluster=OG0002972;product=term%3DMORN repeat/Vacuolar sorting protein 9 (VPS9) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493|Pfam:PF02204 LTnewLM_25 Pfam protein_match 854973 855038 . + . Parent=LTnewLM_250030100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_25 Pfam protein_match 855264 855314 . + . Parent=LTnewLM_250030100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_25 Pfam protein_match 856077 856421 . + . Parent=LTnewLM_250030100.1:pep;Name=PF02204;signature_desc=Vacuolar sorting protein 9 (VPS9) domain ### LTnewLM_25 AUGUSTUS gene 859186 860355 1 + . ID=LTnewLM_250030200 LTnewLM_25 AUGUSTUS mRNA 859186 860355 1 + . ID=LTnewLM_250030200.1;Parent=LTnewLM_250030200 LTnewLM_25 AUGUSTUS CDS 859186 860355 1 + 0 ID=LTnewLM_250030200.1:CDS:1;Parent=LTnewLM_250030200.1 ### LTnewLM_25 . polypeptide 859186 860355 . + . ID=LTnewLM_250030200.1:pep;Derives_from=LTnewLM_250030200.1;orthologous_to=LmjF.25.2340_mRNA;ortholog_cluster=OG0002973;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_25 Pfam protein_match 859321 860106 . + . Parent=LTnewLM_250030200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_25 Pfam protein_match 859327 860079 . + . Parent=LTnewLM_250030200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_25 AUGUSTUS gene 863337 864431 1 + . ID=LTnewLM_250030300 LTnewLM_25 AUGUSTUS mRNA 863337 864431 1 + . ID=LTnewLM_250030300.1;Parent=LTnewLM_250030300 LTnewLM_25 AUGUSTUS CDS 863337 864431 1 + 0 ID=LTnewLM_250030300.1:CDS:1;Parent=LTnewLM_250030300.1 ### LTnewLM_25 . polypeptide 863337 864431 . + . ID=LTnewLM_250030300.1:pep;Derives_from=LTnewLM_250030300.1;orthologous_to=LmjF.25.2350_mRNA;ortholog_cluster=OG0002974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 865709 867430 1 + . ID=LTnewLM_250030400 LTnewLM_25 AUGUSTUS mRNA 865709 867430 1 + . ID=LTnewLM_250030400.1;Parent=LTnewLM_250030400 LTnewLM_25 AUGUSTUS CDS 865709 867430 1 + 0 ID=LTnewLM_250030400.1:CDS:1;Parent=LTnewLM_250030400.1 ### LTnewLM_25 . polypeptide 865709 867430 . + . ID=LTnewLM_250030400.1:pep;Derives_from=LTnewLM_250030400.1;orthologous_to=LmjF.25.2360_mRNA;ortholog_cluster=OG0002975;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 868731 869435 1 + . ID=LTnewLM_250030500 LTnewLM_25 AUGUSTUS mRNA 868731 869435 1 + . ID=LTnewLM_250030500.1;Parent=LTnewLM_250030500 LTnewLM_25 AUGUSTUS CDS 868731 869435 1 + 0 ID=LTnewLM_250030500.1:CDS:1;Parent=LTnewLM_250030500.1 ### LTnewLM_25 . polypeptide 868731 869435 . + . ID=LTnewLM_250030500.1:pep;Derives_from=LTnewLM_250030500.1;orthologous_to=LmjF.25.2370_mRNA;ortholog_cluster=OG0002976;product=term%3DAAA domain/Adenylate kinase/Adenylate kinase%2C active site lid%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13207|Pfam:PF00406|Pfam:PF05191;Ontology_term=GO:0004017 LTnewLM_25 Pfam protein_match 868761 869129 . + . Parent=LTnewLM_250030500.1:pep;Name=PF13207;signature_desc=AAA domain LTnewLM_25 Pfam protein_match 868761 869351 . + . Parent=LTnewLM_250030500.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_25 Pfam protein_match 869127 869267 . + . Parent=LTnewLM_250030500.1:pep;Name=PF05191;signature_desc=Adenylate kinase%2C active site lid;Ontology_term=GO:0004017 ### LTnewLM_25 AUGUSTUS gene 870306 870695 1 + . ID=LTnewLM_250030600 LTnewLM_25 AUGUSTUS mRNA 870306 870695 1 + . ID=LTnewLM_250030600.1;Parent=LTnewLM_250030600 LTnewLM_25 AUGUSTUS CDS 870306 870695 1 + 0 ID=LTnewLM_250030600.1:CDS:1;Parent=LTnewLM_250030600.1 ### LTnewLM_25 . polypeptide 870306 870695 . + . ID=LTnewLM_250030600.1:pep;Derives_from=LTnewLM_250030600.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 872072 872278 1 + . ID=LTnewLM_250030700 LTnewLM_25 AUGUSTUS mRNA 872072 872278 1 + . ID=LTnewLM_250030700.1;Parent=LTnewLM_250030700 LTnewLM_25 AUGUSTUS CDS 872072 872278 1 + 0 ID=LTnewLM_250030700.1:CDS:1;Parent=LTnewLM_250030700.1 ### LTnewLM_25 . polypeptide 872072 872278 . + . ID=LTnewLM_250030700.1:pep;Derives_from=LTnewLM_250030700.1;orthologous_to=LmjF.25.2375_mRNA;ortholog_cluster=OG0002977;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 874235 876394 1 + . ID=LTnewLM_250030800 LTnewLM_25 AUGUSTUS mRNA 874235 876394 1 + . ID=LTnewLM_250030800.1;Parent=LTnewLM_250030800 LTnewLM_25 AUGUSTUS CDS 874235 876394 1 + 0 ID=LTnewLM_250030800.1:CDS:1;Parent=LTnewLM_250030800.1 ### LTnewLM_25 . polypeptide 874235 876394 . + . ID=LTnewLM_250030800.1:pep;Derives_from=LTnewLM_250030800.1;orthologous_to=LTnewLM_270025000.1,LmjF.27.1870_mRNA;ortholog_cluster=OG0000399;product=term%3DCHAP domain/Glutathionylspermidine synthase preATP-grasp%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257|Pfam:PF03738 LTnewLM_25 Pfam protein_match 874448 874741 . + . Parent=LTnewLM_250030800.1:pep;Name=PF05257;signature_desc=CHAP domain LTnewLM_25 Pfam protein_match 875114 876025 . + . Parent=LTnewLM_250030800.1:pep;Name=PF03738;signature_desc=Glutathionylspermidine synthase preATP-grasp ### LTnewLM_25 AUGUSTUS gene 879308 880060 1 + . ID=LTnewLM_250030900 LTnewLM_25 AUGUSTUS mRNA 879308 880060 1 + . ID=LTnewLM_250030900.1;Parent=LTnewLM_250030900 LTnewLM_25 AUGUSTUS CDS 879308 880060 1 + 0 ID=LTnewLM_250030900.1:CDS:1;Parent=LTnewLM_250030900.1 ### LTnewLM_25 . polypeptide 879308 880060 . + . ID=LTnewLM_250030900.1:pep;Derives_from=LTnewLM_250030900.1;orthologous_to=LmjF.25.2400_mRNA;ortholog_cluster=OG0002978;product=term%3DArv1-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04161 LTnewLM_25 Pfam protein_match 879314 879931 . + . Parent=LTnewLM_250030900.1:pep;Name=PF04161;signature_desc=Arv1-like family ### LTnewLM_25 AUGUSTUS gene 880728 883613 1 + . ID=LTnewLM_250031000 LTnewLM_25 AUGUSTUS mRNA 880728 883613 1 + . ID=LTnewLM_250031000.1;Parent=LTnewLM_250031000 LTnewLM_25 AUGUSTUS CDS 880728 883613 1 + 0 ID=LTnewLM_250031000.1:CDS:1;Parent=LTnewLM_250031000.1 ### LTnewLM_25 . polypeptide 880728 883613 . + . ID=LTnewLM_250031000.1:pep;Derives_from=LTnewLM_250031000.1;orthologous_to=LmjF.25.2410_mRNA;ortholog_cluster=OG0002979;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 AUGUSTUS gene 885295 886080 1 + . ID=LTnewLM_250031100 LTnewLM_25 AUGUSTUS mRNA 885295 886080 1 + . ID=LTnewLM_250031100.1;Parent=LTnewLM_250031100 LTnewLM_25 AUGUSTUS CDS 885295 886080 1 + 0 ID=LTnewLM_250031100.1:CDS:1;Parent=LTnewLM_250031100.1 ### LTnewLM_25 . polypeptide 885295 886080 . + . ID=LTnewLM_250031100.1:pep;Derives_from=LTnewLM_250031100.1;orthologous_to=LmjF.25.2420_mRNA;ortholog_cluster=OG0002980;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_25 . pseudogene 887068 888912 3.29e+03 + . ID=LTnewLM_250031200:pseudogene;has_internal_stop=true;has_frameshift=false;has_stop=true;Target=LmjF.02.0040:mRNA 6 620;original_prot_length=620 LTnewLM_25 . pseudogenic_transcript 887068 888912 . + . ID=LTnewLM_250031200.1;Parent=LTnewLM_250031200:pseudogene LTnewLM_25 . pseudogenic_exon 887068 888912 . + . ID=LTnewLM_250031200.1:pseudogenic_exon:1;Parent=LTnewLM_250031200.1 ### LTnewLM_25 . polypeptide 887068 888912 . + . ID=LTnewLM_250031200.1:pep;Derives_from=LTnewLM_250031200.1;orthologous_to=LTnewLM_020005400.1,LmjF.02.0040_mRNA,LmjF.25.2430_mRNA;ortholog_cluster=OG0000143;product=term%3DCreatinase/Prolidase N-terminal domain/Metallopeptidase family M24/C-terminal region of peptidase_M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01321|Pfam:PF16189|Pfam:PF00557|Pfam:PF16188;Ontology_term=GO:0016787 LTnewLM_25 Pfam protein_match 887086 887472 . + . Parent=LTnewLM_250031200.1:pep;Name=PF01321;signature_desc=Creatinase/Prolidase N-terminal domain;Ontology_term=GO:0016787 LTnewLM_25 Pfam protein_match 887491 887967 . + . Parent=LTnewLM_250031200.1:pep;Name=PF16189;signature_desc=Creatinase/Prolidase N-terminal domain LTnewLM_25 Pfam protein_match 887980 888618 . + . Parent=LTnewLM_250031200.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 LTnewLM_25 Pfam protein_match 888661 888852 . + . Parent=LTnewLM_250031200.1:pep;Name=PF16188;signature_desc=C-terminal region of peptidase_M24 ### LTnewLM_25 . pseudogene 889756 890740 . + . ID=LTnewLM_250031300:pseudogene;coverage=1.0;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.2440_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 889756 890740 . + . ID=LTnewLM_250031300.1;Parent=LTnewLM_250031300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 889756 890740 . + . ID=LTnewLM_250031300.1:pseudogenic_exon:1;Parent=LTnewLM_250031300.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 889756 890740 . + . ID=LTnewLM_250031300.1:pep;Derives_from=LTnewLM_250031300.1;product=term%3Dhypothetical protein ### LTnewLM_25 AUGUSTUS gene 891555 891857 1 + . ID=LTnewLM_250031400 LTnewLM_25 AUGUSTUS mRNA 891555 891857 1 + . ID=LTnewLM_250031400.1;Parent=LTnewLM_250031400 LTnewLM_25 AUGUSTUS CDS 891555 891857 1 + 0 ID=LTnewLM_250031400.1:CDS:1;Parent=LTnewLM_250031400.1 ### LTnewLM_25 . polypeptide 891555 891857 . + . ID=LTnewLM_250031400.1:pep;Derives_from=LTnewLM_250031400.1;orthologous_to=LTnewLM_350005200.1,LTnewLM_360005200.1,LmjF.02.0020_mRNA,LmjF.25.2450_mRNA,LmjF.31.3180_mRNA,LmjF.35.1310_mRNA,LmjF.36.0020_mRNA;ortholog_cluster=OG0000027;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_25 Pfam protein_match 891636 891821 . + . Parent=LTnewLM_250031400.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_25 Pfam protein_match 891651 891818 . + . Parent=LTnewLM_250031400.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_25 . pseudogene 893673 896121 . + . ID=LTnewLM_250031500:pseudogene;coverage=0.995;sequence_ID=0.893;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.25.2460_0;has_internal_stop=true LTnewLM_25 . pseudogenic_transcript 893673 896121 . + . ID=LTnewLM_250031500.1;Parent=LTnewLM_250031500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_25 . pseudogenic_exon 893673 896121 . + . ID=LTnewLM_250031500.1:pseudogenic_exon:1;Parent=LTnewLM_250031500.1;extra_copy_number=0 ### LTnewLM_25 . polypeptide 893673 896121 . + . ID=LTnewLM_250031500.1:pep;Derives_from=LTnewLM_250031500.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . contig 1 1070514 . + . Name=LTnewLM_CTG000026 LTnewLM_26 Liftoff gene 5427 5702 . - . ID=LTnewLM_260005000;coverage=1.0;sequence_ID=0.923;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.0005_0 LTnewLM_26 Liftoff mRNA 5427 5702 . - . ID=LTnewLM_260005000.1;Parent=LTnewLM_260005000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 5427 5702 . - 0 ID=LTnewLM_260005000.1:CDS:1;Parent=LTnewLM_260005000.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 5427 5702 . - . ID=LTnewLM_260005000.1:pep;Derives_from=LTnewLM_260005000.1;orthologous_to=LmjF.26.0005_mRNA;ortholog_cluster=OG0002981;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_26 Pfam protein_match 5472 5654 . - . Parent=LTnewLM_260005000.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_26 AUGUSTUS gene 6142 7230 1 - . ID=LTnewLM_260005100 LTnewLM_26 AUGUSTUS mRNA 6142 7230 1 - . ID=LTnewLM_260005100.1;Parent=LTnewLM_260005100 LTnewLM_26 AUGUSTUS CDS 6142 7230 1 - 0 ID=LTnewLM_260005100.1:CDS:1;Parent=LTnewLM_260005100.1 ### LTnewLM_26 . polypeptide 6142 7230 . - . ID=LTnewLM_260005100.1:pep;Derives_from=LTnewLM_260005100.1;orthologous_to=LmjF.26.0010_mRNA;ortholog_cluster=OG0002982;product=term%3DBrix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04427 LTnewLM_26 Pfam protein_match 6451 7107 . - . Parent=LTnewLM_260005100.1:pep;Name=PF04427;signature_desc=Brix domain ### LTnewLM_26 AUGUSTUS gene 8458 8913 1 - . ID=LTnewLM_260005200 LTnewLM_26 AUGUSTUS mRNA 8458 8913 1 - . ID=LTnewLM_260005200.1;Parent=LTnewLM_260005200 LTnewLM_26 AUGUSTUS CDS 8458 8913 1 - 0 ID=LTnewLM_260005200.1:CDS:1;Parent=LTnewLM_260005200.1 ### LTnewLM_26 . polypeptide 8458 8913 . - . ID=LTnewLM_260005200.1:pep;Derives_from=LTnewLM_260005200.1;orthologous_to=LmjF.26.0020_mRNA;ortholog_cluster=OG0002983;product=term%3DGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13669 LTnewLM_26 Pfam protein_match 8518 8859 . - . Parent=LTnewLM_260005200.1:pep;Name=PF13669;signature_desc=Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ### LTnewLM_26 AUGUSTUS gene 10126 13047 1 - . ID=LTnewLM_260005300 LTnewLM_26 AUGUSTUS mRNA 10126 13047 1 - . ID=LTnewLM_260005300.1;Parent=LTnewLM_260005300 LTnewLM_26 AUGUSTUS CDS 10126 13047 1 - 0 ID=LTnewLM_260005300.1:CDS:1;Parent=LTnewLM_260005300.1 ### LTnewLM_26 . polypeptide 10126 13047 . - . ID=LTnewLM_260005300.1:pep;Derives_from=LTnewLM_260005300.1;orthologous_to=LmjF.26.0030_mRNA;ortholog_cluster=OG0002984;product=term%3DGlycine cleavage system P-protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02347;Ontology_term=GO:0055114,GO:0006546,GO:0004375 LTnewLM_26 Pfam protein_match 10807 11622 . - . Parent=LTnewLM_260005300.1:pep;Name=PF02347;signature_desc=Glycine cleavage system P-protein;Ontology_term=GO:0004375,GO:0006546,GO:0055114 LTnewLM_26 Pfam protein_match 11689 12966 . - . Parent=LTnewLM_260005300.1:pep;Name=PF02347;signature_desc=Glycine cleavage system P-protein;Ontology_term=GO:0004375,GO:0006546,GO:0055114 ### LTnewLM_26 AUGUSTUS gene 14108 14998 1 - . ID=LTnewLM_260005400 LTnewLM_26 AUGUSTUS mRNA 14108 14998 1 - . ID=LTnewLM_260005400.1;Parent=LTnewLM_260005400 LTnewLM_26 AUGUSTUS CDS 14108 14998 1 - 0 ID=LTnewLM_260005400.1:CDS:1;Parent=LTnewLM_260005400.1 ### LTnewLM_26 . polypeptide 14108 14998 . - . ID=LTnewLM_260005400.1:pep;Derives_from=LTnewLM_260005400.1;orthologous_to=LmjF.26.0040_mRNA;ortholog_cluster=OG0002985;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 14141 14980 . - . Parent=LTnewLM_260005400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 14396 14980 . - . Parent=LTnewLM_260005400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_26 . polypeptide 15780 16565 . - . ID=LTnewLM_260005500.1:pep;Derives_from=LTnewLM_260005500.1;orthologous_to=LmjF.26.0050.1_mRNA,LmjF.26.0050.2_mRNA;ortholog_cluster=OG0000527;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . polypeptide 15780 16791 . - . ID=LTnewLM_260005500.2:pep;Derives_from=LTnewLM_260005500.2;product=term%3Dhypothetical protein ### LTnewLM_26 . pseudogene 15780 19588 . - . ID=LTnewLM_260005500:pseudogene;coverage=0.955;sequence_ID=0.833;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.0050_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 15780 16575 . - . ID=LTnewLM_260005500.1;Parent=LTnewLM_260005500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 15780 16565 . - . ID=LTnewLM_260005500.1:pseudogenic_exon:1;Parent=LTnewLM_260005500.1;extra_copy_number=0 LTnewLM_26 . pseudogenic_transcript 15780 19588 . - . ID=LTnewLM_260005500.2;Parent=LTnewLM_260005500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 15780 16791 . - . ID=LTnewLM_260005500.2:pseudogenic_exon:1;Parent=LTnewLM_260005500.2;extra_copy_number=0 ### LTnewLM_26 AUGUSTUS gene 20102 21010 1 - . ID=LTnewLM_260005600 LTnewLM_26 AUGUSTUS mRNA 20102 21010 1 - . ID=LTnewLM_260005600.1;Parent=LTnewLM_260005600 LTnewLM_26 AUGUSTUS CDS 20102 21010 1 - 0 ID=LTnewLM_260005600.1:CDS:1;Parent=LTnewLM_260005600.1 ### LTnewLM_26 . polypeptide 20102 21010 . - . ID=LTnewLM_260005600.1:pep;Derives_from=LTnewLM_260005600.1;orthologous_to=LmjF.26.0055_mRNA;ortholog_cluster=OG0002986;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 21397 22206 1 - . ID=LTnewLM_260005700 LTnewLM_26 AUGUSTUS mRNA 21397 22206 1 - . ID=LTnewLM_260005700.1;Parent=LTnewLM_260005700 LTnewLM_26 AUGUSTUS CDS 21397 22206 1 - 0 ID=LTnewLM_260005700.1:CDS:1;Parent=LTnewLM_260005700.1 ### LTnewLM_26 . polypeptide 21397 22206 . - . ID=LTnewLM_260005700.1:pep;Derives_from=LTnewLM_260005700.1;orthologous_to=LmjF.26.0058_mRNA;ortholog_cluster=OG0002987;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 22870 23103 1 - . ID=LTnewLM_260005800 LTnewLM_26 AUGUSTUS mRNA 22870 23103 1 - . ID=LTnewLM_260005800.1;Parent=LTnewLM_260005800 LTnewLM_26 AUGUSTUS CDS 22870 23103 1 - 0 ID=LTnewLM_260005800.1:CDS:1;Parent=LTnewLM_260005800.1 ### LTnewLM_26 . polypeptide 22870 23103 . - . ID=LTnewLM_260005800.1:pep;Derives_from=LTnewLM_260005800.1;orthologous_to=LmjF.26.0060_mRNA,LmjF.26.0100_mRNA;ortholog_cluster=OG0000400;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 23597 24667 1 - . ID=LTnewLM_260005900 LTnewLM_26 AUGUSTUS mRNA 23597 24667 1 - . ID=LTnewLM_260005900.1;Parent=LTnewLM_260005900 LTnewLM_26 AUGUSTUS CDS 23597 24667 1 - 0 ID=LTnewLM_260005900.1:CDS:1;Parent=LTnewLM_260005900.1 ### LTnewLM_26 . polypeptide 23597 24667 . - . ID=LTnewLM_260005900.1:pep;Derives_from=LTnewLM_260005900.1;orthologous_to=LTnewLM_260006200.1,LmjF.26.0070_mRNA,LmjF.26.0110_mRNA;ortholog_cluster=OG0000181;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 25446 26153 1 - . ID=LTnewLM_260006000 LTnewLM_26 AUGUSTUS mRNA 25446 26153 1 - . ID=LTnewLM_260006000.1;Parent=LTnewLM_260006000 LTnewLM_26 AUGUSTUS CDS 25446 26153 1 - 0 ID=LTnewLM_260006000.1:CDS:1;Parent=LTnewLM_260006000.1 ### LTnewLM_26 . polypeptide 25446 26153 . - . ID=LTnewLM_260006000.1:pep;Derives_from=LTnewLM_260006000.1;orthologous_to=LTnewLM_260006300.1,LmjF.26.0115_mRNA;ortholog_cluster=OG0000401;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 29088 29321 1 - . ID=LTnewLM_260006100 LTnewLM_26 AUGUSTUS mRNA 29088 29321 1 - . ID=LTnewLM_260006100.1;Parent=LTnewLM_260006100 LTnewLM_26 AUGUSTUS CDS 29088 29321 1 - 0 ID=LTnewLM_260006100.1:CDS:1;Parent=LTnewLM_260006100.1 ### LTnewLM_26 . polypeptide 29088 29321 . - . ID=LTnewLM_260006100.1:pep;Derives_from=LTnewLM_260006100.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 29814 30884 1 - . ID=LTnewLM_260006200 LTnewLM_26 AUGUSTUS mRNA 29814 30884 1 - . ID=LTnewLM_260006200.1;Parent=LTnewLM_260006200 LTnewLM_26 AUGUSTUS CDS 29814 30884 1 - 0 ID=LTnewLM_260006200.1:CDS:1;Parent=LTnewLM_260006200.1 ### LTnewLM_26 . polypeptide 29814 30884 . - . ID=LTnewLM_260006200.1:pep;Derives_from=LTnewLM_260006200.1;orthologous_to=LTnewLM_260005900.1,LmjF.26.0070_mRNA,LmjF.26.0110_mRNA;ortholog_cluster=OG0000181;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 31632 32339 1 - . ID=LTnewLM_260006300 LTnewLM_26 AUGUSTUS mRNA 31632 32339 1 - . ID=LTnewLM_260006300.1;Parent=LTnewLM_260006300 LTnewLM_26 AUGUSTUS CDS 31632 32339 1 - 0 ID=LTnewLM_260006300.1:CDS:1;Parent=LTnewLM_260006300.1 ### LTnewLM_26 . polypeptide 31632 32339 . - . ID=LTnewLM_260006300.1:pep;Derives_from=LTnewLM_260006300.1;orthologous_to=LTnewLM_260006000.1,LmjF.26.0115_mRNA;ortholog_cluster=OG0000401;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 34604 35317 1 - . ID=LTnewLM_260006400 LTnewLM_26 AUGUSTUS mRNA 34604 35317 1 - . ID=LTnewLM_260006400.1;Parent=LTnewLM_260006400 LTnewLM_26 AUGUSTUS CDS 34604 35317 1 - 0 ID=LTnewLM_260006400.1:CDS:1;Parent=LTnewLM_260006400.1 ### LTnewLM_26 . polypeptide 34604 35317 . - . ID=LTnewLM_260006400.1:pep;Derives_from=LTnewLM_260006400.1;orthologous_to=LmjF.26.0140_mRNA;ortholog_cluster=OG0002988;product=term%3DPhosphoribosyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00156;Ontology_term=GO:0009116 LTnewLM_26 Pfam protein_match 34715 35185 . - . Parent=LTnewLM_260006400.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 ### LTnewLM_26 AUGUSTUS gene 36082 37878 1 - . ID=LTnewLM_260006500 LTnewLM_26 AUGUSTUS mRNA 36082 37878 1 - . ID=LTnewLM_260006500.1;Parent=LTnewLM_260006500 LTnewLM_26 AUGUSTUS CDS 36082 37878 1 - 0 ID=LTnewLM_260006500.1:CDS:1;Parent=LTnewLM_260006500.1 ### LTnewLM_26 . polypeptide 36082 37878 . - . ID=LTnewLM_260006500.1:pep;Derives_from=LTnewLM_260006500.1;orthologous_to=LmjF.26.0150_mRNA;ortholog_cluster=OG0002989;product=term%3DMini-chromosome maintenance replisome factor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09739 LTnewLM_26 Pfam protein_match 36136 37608 . - . Parent=LTnewLM_260006500.1:pep;Name=PF09739;signature_desc=Mini-chromosome maintenance replisome factor ### LTnewLM_26 AUGUSTUS gene 41884 42756 1 - . ID=LTnewLM_260006600 LTnewLM_26 AUGUSTUS mRNA 41884 42756 1 - . ID=LTnewLM_260006600.1;Parent=LTnewLM_260006600 LTnewLM_26 AUGUSTUS CDS 41884 42756 1 - 0 ID=LTnewLM_260006600.1:CDS:1;Parent=LTnewLM_260006600.1 ### LTnewLM_26 . polypeptide 41884 42756 . - . ID=LTnewLM_260006600.1:pep;Derives_from=LTnewLM_260006600.1;orthologous_to=LmjF.26.0160_mRNA;ortholog_cluster=OG0002990;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 41935 42417 . - . Parent=LTnewLM_260006600.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 48213 48971 1 - . ID=LTnewLM_260006700 LTnewLM_26 AUGUSTUS mRNA 48213 48971 1 - . ID=LTnewLM_260006700.1;Parent=LTnewLM_260006700 LTnewLM_26 AUGUSTUS CDS 48213 48971 1 - 0 ID=LTnewLM_260006700.1:CDS:1;Parent=LTnewLM_260006700.1 ### LTnewLM_26 . polypeptide 48213 48971 . - . ID=LTnewLM_260006700.1:pep;Derives_from=LTnewLM_260006700.1;orthologous_to=LTnewLM_260006800.1,LmjF.26.0170_mRNA,LmjF.26.0180_mRNA;ortholog_cluster=OG0000182;product=term%3DRibosomal L30 N-terminal domain/Ribosomal protein L30p/L7e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08079|Pfam:PF00327 LTnewLM_26 Pfam protein_match 48543 48689 . - . Parent=LTnewLM_260006700.1:pep;Name=PF00327;signature_desc=Ribosomal protein L30p/L7e LTnewLM_26 Pfam protein_match 48708 48917 . - . Parent=LTnewLM_260006700.1:pep;Name=PF08079;signature_desc=Ribosomal L30 N-terminal domain ### LTnewLM_26 AUGUSTUS gene 49906 50664 1 - . ID=LTnewLM_260006800 LTnewLM_26 AUGUSTUS mRNA 49906 50664 1 - . ID=LTnewLM_260006800.1;Parent=LTnewLM_260006800 LTnewLM_26 AUGUSTUS CDS 49906 50664 1 - 0 ID=LTnewLM_260006800.1:CDS:1;Parent=LTnewLM_260006800.1 ### LTnewLM_26 . polypeptide 49906 50664 . - . ID=LTnewLM_260006800.1:pep;Derives_from=LTnewLM_260006800.1;orthologous_to=LTnewLM_260006700.1,LmjF.26.0170_mRNA,LmjF.26.0180_mRNA;ortholog_cluster=OG0000182;product=term%3DRibosomal L30 N-terminal domain/Ribosomal protein L30p/L7e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08079|Pfam:PF00327 LTnewLM_26 Pfam protein_match 50236 50382 . - . Parent=LTnewLM_260006800.1:pep;Name=PF00327;signature_desc=Ribosomal protein L30p/L7e LTnewLM_26 Pfam protein_match 50401 50610 . - . Parent=LTnewLM_260006800.1:pep;Name=PF08079;signature_desc=Ribosomal L30 N-terminal domain ### LTnewLM_26 AUGUSTUS gene 52147 52632 1 - . ID=LTnewLM_260006900 LTnewLM_26 AUGUSTUS mRNA 52147 52632 1 - . ID=LTnewLM_260006900.1;Parent=LTnewLM_260006900 LTnewLM_26 AUGUSTUS CDS 52147 52632 1 - 0 ID=LTnewLM_260006900.1:CDS:1;Parent=LTnewLM_260006900.1 ### LTnewLM_26 . polypeptide 52147 52632 . - . ID=LTnewLM_260006900.1:pep;Derives_from=LTnewLM_260006900.1;orthologous_to=LmjF.26.0185_mRNA;ortholog_cluster=OG0002991;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 53654 54508 1 - . ID=LTnewLM_260007000 LTnewLM_26 AUGUSTUS mRNA 53654 54508 1 - . ID=LTnewLM_260007000.1;Parent=LTnewLM_260007000 LTnewLM_26 AUGUSTUS CDS 53654 54508 1 - 0 ID=LTnewLM_260007000.1:CDS:1;Parent=LTnewLM_260007000.1 ### LTnewLM_26 . polypeptide 53654 54508 . - . ID=LTnewLM_260007000.1:pep;Derives_from=LTnewLM_260007000.1;orthologous_to=LmjF.26.0190_mRNA;ortholog_cluster=OG0002992;product=term%3DScaffold protein Nfu/NifU N terminal/NifU-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08712|Pfam:PF01106;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_26 Pfam protein_match 53756 53947 . - . Parent=LTnewLM_260007000.1:pep;Name=PF01106;signature_desc=NifU-like domain;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_26 Pfam protein_match 54047 54307 . - . Parent=LTnewLM_260007000.1:pep;Name=PF08712;signature_desc=Scaffold protein Nfu/NifU N terminal ### LTnewLM_26 AUGUSTUS gene 56402 57622 1 - . ID=LTnewLM_260007100 LTnewLM_26 AUGUSTUS mRNA 56402 57622 1 - . ID=LTnewLM_260007100.1;Parent=LTnewLM_260007100 LTnewLM_26 AUGUSTUS CDS 56402 57622 1 - 0 ID=LTnewLM_260007100.1:CDS:1;Parent=LTnewLM_260007100.1 ### LTnewLM_26 . polypeptide 56402 57622 . - . ID=LTnewLM_260007100.1:pep;Derives_from=LTnewLM_260007100.1;orthologous_to=LmjF.26.0200_mRNA;ortholog_cluster=OG0002993;product=term%3DeRF1 domain 1/eRF1 domain 2/eRF1 domain 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03463|Pfam:PF03464|Pfam:PF03465 LTnewLM_26 Pfam protein_match 56507 56797 . - . Parent=LTnewLM_260007100.1:pep;Name=PF03465;signature_desc=eRF1 domain 3 LTnewLM_26 Pfam protein_match 56819 57214 . - . Parent=LTnewLM_260007100.1:pep;Name=PF03464;signature_desc=eRF1 domain 2 LTnewLM_26 Pfam protein_match 57239 57622 . - . Parent=LTnewLM_260007100.1:pep;Name=PF03463;signature_desc=eRF1 domain 1 ### LTnewLM_26 AUGUSTUS gene 58706 59827 1 - . ID=LTnewLM_260007200 LTnewLM_26 AUGUSTUS mRNA 58706 59827 1 - . ID=LTnewLM_260007200.1;Parent=LTnewLM_260007200 LTnewLM_26 AUGUSTUS CDS 58706 59827 1 - 0 ID=LTnewLM_260007200.1:CDS:1;Parent=LTnewLM_260007200.1 ### LTnewLM_26 . polypeptide 58706 59827 . - . ID=LTnewLM_260007200.1:pep;Derives_from=LTnewLM_260007200.1;orthologous_to=LmjF.26.0210_mRNA;ortholog_cluster=OG0002994;product=term%3DSir2 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02146;Ontology_term=GO:0070403 LTnewLM_26 Pfam protein_match 59162 59713 . - . Parent=LTnewLM_260007200.1:pep;Name=PF02146;signature_desc=Sir2 family;Ontology_term=GO:0070403 ### LTnewLM_26 AUGUSTUS gene 60444 61388 1 - . ID=LTnewLM_260007300 LTnewLM_26 AUGUSTUS mRNA 60444 61388 1 - . ID=LTnewLM_260007300.1;Parent=LTnewLM_260007300 LTnewLM_26 AUGUSTUS CDS 60444 61388 1 - 0 ID=LTnewLM_260007300.1:CDS:1;Parent=LTnewLM_260007300.1 ### LTnewLM_26 . polypeptide 60444 61388 . - . ID=LTnewLM_260007300.1:pep;Derives_from=LTnewLM_260007300.1;orthologous_to=LmjF.26.0220_mRNA;ortholog_cluster=OG0002995;product=term%3DSerine aminopeptidase%2C S33/Lipid-droplet associated hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF10230 LTnewLM_26 Pfam protein_match 60498 61241 . - . Parent=LTnewLM_260007300.1:pep;Name=PF10230;signature_desc=Lipid-droplet associated hydrolase LTnewLM_26 Pfam protein_match 60825 61247 . - . Parent=LTnewLM_260007300.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 ### LTnewLM_26 AUGUSTUS gene 62901 64037 1 - . ID=LTnewLM_260007400 LTnewLM_26 AUGUSTUS mRNA 62901 64037 1 - . ID=LTnewLM_260007400.1;Parent=LTnewLM_260007400 LTnewLM_26 AUGUSTUS CDS 62901 64037 1 - 0 ID=LTnewLM_260007400.1:CDS:1;Parent=LTnewLM_260007400.1 ### LTnewLM_26 . polypeptide 62901 64037 . - . ID=LTnewLM_260007400.1:pep;Derives_from=LTnewLM_260007400.1;orthologous_to=LmjF.26.0230_mRNA;ortholog_cluster=OG0002996;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 65086 65708 . - . ID=LTnewLM_260007500:pseudogene;coverage=0.998;sequence_ID=0.958;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.0240_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 65086 65708 . - . ID=LTnewLM_260007500.1;Parent=LTnewLM_260007500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 65086 65708 . - . ID=LTnewLM_260007500.1:pseudogenic_exon:1;Parent=LTnewLM_260007500.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 65086 65708 . - . ID=LTnewLM_260007500.1:pep;Derives_from=LTnewLM_260007500.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 66437 69820 1 - . ID=LTnewLM_260007600 LTnewLM_26 AUGUSTUS mRNA 66437 69820 1 - . ID=LTnewLM_260007600.1;Parent=LTnewLM_260007600 LTnewLM_26 AUGUSTUS CDS 66437 69820 1 - 0 ID=LTnewLM_260007600.1:CDS:1;Parent=LTnewLM_260007600.1 ### LTnewLM_26 . polypeptide 66437 69820 . - . ID=LTnewLM_260007600.1:pep;Derives_from=LTnewLM_260007600.1;orthologous_to=LmjF.26.0250_mRNA;ortholog_cluster=OG0002997;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 70321 72345 1 - . ID=LTnewLM_260007700 LTnewLM_26 AUGUSTUS mRNA 70321 72345 1 - . ID=LTnewLM_260007700.1;Parent=LTnewLM_260007700 LTnewLM_26 AUGUSTUS CDS 70321 72345 1 - 0 ID=LTnewLM_260007700.1:CDS:1;Parent=LTnewLM_260007700.1 ### LTnewLM_26 . polypeptide 70321 72345 . - . ID=LTnewLM_260007700.1:pep;Derives_from=LTnewLM_260007700.1;orthologous_to=LmjF.26.0260_mRNA;ortholog_cluster=OG0002998;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 73232 75049 1 - . ID=LTnewLM_260007800 LTnewLM_26 AUGUSTUS mRNA 73232 75049 1 - . ID=LTnewLM_260007800.1;Parent=LTnewLM_260007800 LTnewLM_26 AUGUSTUS CDS 73232 75049 1 - 0 ID=LTnewLM_260007800.1:CDS:1;Parent=LTnewLM_260007800.1 ### LTnewLM_26 . polypeptide 73232 75049 . - . ID=LTnewLM_260007800.1:pep;Derives_from=LTnewLM_260007800.1;orthologous_to=LmjF.26.0270_mRNA;ortholog_cluster=OG0002999;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Ferrous iron transport protein B/AIG1 family/Ras family/KH-domain-like of EngA bacterial GTPase enzymes%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF02421|Pfam:PF04548|Pfam:PF00071|Pfam:PF14714;Ontology_term=GO:0005525,GO:0003924,GO:0015093,GO:0007264,GO:0016021,GO:0015684 LTnewLM_26 Pfam protein_match 73271 73504 . - . Parent=LTnewLM_260007800.1:pep;Name=PF14714;signature_desc=KH-domain-like of EngA bacterial GTPase enzymes%2C C-terminal LTnewLM_26 Pfam protein_match 73526 74044 . - . Parent=LTnewLM_260007800.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_26 Pfam protein_match 73532 74035 . - . Parent=LTnewLM_260007800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_26 Pfam protein_match 73640 74038 . - . Parent=LTnewLM_260007800.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_26 Pfam protein_match 73679 74038 . - . Parent=LTnewLM_260007800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_26 Pfam protein_match 73763 74038 . - . Parent=LTnewLM_260007800.1:pep;Name=PF04548;signature_desc=AIG1 family;Ontology_term=GO:0005525 LTnewLM_26 Pfam protein_match 74180 74638 . - . Parent=LTnewLM_260007800.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_26 Pfam protein_match 74240 74641 . - . Parent=LTnewLM_260007800.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_26 Pfam protein_match 74297 74638 . - . Parent=LTnewLM_260007800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_26 AUGUSTUS gene 75772 76380 1 - . ID=LTnewLM_260007900 LTnewLM_26 AUGUSTUS mRNA 75772 76380 1 - . ID=LTnewLM_260007900.1;Parent=LTnewLM_260007900 LTnewLM_26 AUGUSTUS CDS 75772 76380 1 - 0 ID=LTnewLM_260007900.1:CDS:1;Parent=LTnewLM_260007900.1 ### LTnewLM_26 . polypeptide 75772 76380 . - . ID=LTnewLM_260007900.1:pep;Derives_from=LTnewLM_260007900.1;orthologous_to=LmjF.26.0280_mRNA;ortholog_cluster=OG0003000;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 77629 78444 1 - . ID=LTnewLM_260008000 LTnewLM_26 AUGUSTUS mRNA 77629 78444 1 - . ID=LTnewLM_260008000.1;Parent=LTnewLM_260008000 LTnewLM_26 AUGUSTUS CDS 77629 78444 1 - 0 ID=LTnewLM_260008000.1:CDS:1;Parent=LTnewLM_260008000.1 ### LTnewLM_26 . polypeptide 77629 78444 . - . ID=LTnewLM_260008000.1:pep;Derives_from=LTnewLM_260008000.1;orthologous_to=LmjF.26.0290_mRNA;ortholog_cluster=OG0003001;product=term%3DNucleotide hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13869;Ontology_term=GO:0005849,GO:0003729,GO:0006378 LTnewLM_26 Pfam protein_match 77665 78306 . - . Parent=LTnewLM_260008000.1:pep;Name=PF13869;signature_desc=Nucleotide hydrolase;Ontology_term=GO:0003729,GO:0006378,GO:0005849 ### LTnewLM_26 . pseudogene 79220 81882 . - . ID=LTnewLM_260008100:pseudogene;coverage=0.999;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.0300_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 79220 81882 . - . ID=LTnewLM_260008100.1;Parent=LTnewLM_260008100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 79220 81882 . - . ID=LTnewLM_260008100.1:pseudogenic_exon:1;Parent=LTnewLM_260008100.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 79220 81882 . - . ID=LTnewLM_260008100.1:pep;Derives_from=LTnewLM_260008100.1;orthologous_to=LmjF.26.0300_mRNA;ortholog_cluster=OG0007545;product=term%3DPeptidase M1 N-terminal domain/Peptidase family M1 domain/ERAP1-like C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17900|Pfam:PF01433|Pfam:PF11838;Ontology_term=GO:0008237,GO:0008270 LTnewLM_26 Pfam protein_match 79315 80250 . - . Parent=LTnewLM_260008100.1:pep;Name=PF11838;signature_desc=ERAP1-like C-terminal domain LTnewLM_26 Pfam protein_match 80485 81132 . - . Parent=LTnewLM_260008100.1:pep;Name=PF01433;signature_desc=Peptidase family M1 domain;Ontology_term=GO:0008237,GO:0008270 LTnewLM_26 Pfam protein_match 81286 81843 . - . Parent=LTnewLM_260008100.1:pep;Name=PF17900;signature_desc=Peptidase M1 N-terminal domain ### LTnewLM_26 AUGUSTUS gene 82772 84775 1 - . ID=LTnewLM_260008200 LTnewLM_26 AUGUSTUS mRNA 82772 84775 1 - . ID=LTnewLM_260008200.1;Parent=LTnewLM_260008200 LTnewLM_26 AUGUSTUS CDS 82772 84775 1 - 0 ID=LTnewLM_260008200.1:CDS:1;Parent=LTnewLM_260008200.1 ### LTnewLM_26 . polypeptide 82772 84775 . - . ID=LTnewLM_260008200.1:pep;Derives_from=LTnewLM_260008200.1;orthologous_to=LmjF.26.0310_mRNA;ortholog_cluster=OG0003002;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat/6-phosphofructo-2-kinase/Histidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13637|Pfam:PF13857|Pfam:PF13606|Pfam:PF00023|Pfam:PF01591|Pfam:PF00300;Ontology_term=GO:0006000,GO:0005515,GO:0005524,GO:0003873 LTnewLM_26 Pfam protein_match 82943 83479 . - . Parent=LTnewLM_260008200.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) LTnewLM_26 Pfam protein_match 83489 84124 . - . Parent=LTnewLM_260008200.1:pep;Name=PF01591;signature_desc=6-phosphofructo-2-kinase;Ontology_term=GO:0003873,GO:0005524,GO:0006000 LTnewLM_26 Pfam protein_match 84233 84463 . - . Parent=LTnewLM_260008200.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_26 Pfam protein_match 84290 84451 . - . Parent=LTnewLM_260008200.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_26 Pfam protein_match 84320 84412 . - . Parent=LTnewLM_260008200.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 84332 84412 . - . Parent=LTnewLM_260008200.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 84350 84460 . - . Parent=LTnewLM_260008200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_26 AUGUSTUS gene 85597 86493 1 - . ID=LTnewLM_260008300 LTnewLM_26 AUGUSTUS mRNA 85597 86493 1 - . ID=LTnewLM_260008300.1;Parent=LTnewLM_260008300 LTnewLM_26 AUGUSTUS CDS 85597 86493 1 - 0 ID=LTnewLM_260008300.1:CDS:1;Parent=LTnewLM_260008300.1 ### LTnewLM_26 . polypeptide 85597 86493 . - . ID=LTnewLM_260008300.1:pep;Derives_from=LTnewLM_260008300.1;orthologous_to=LTnewLM_220008600.1,LmjF.26.0320_mRNA;ortholog_cluster=OG0000382;product=term%3DTetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain/Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00763|Pfam:PF02882;Ontology_term=GO:0004488,GO:0055114,GO:0009396,GO:0003824 LTnewLM_26 Pfam protein_match 85618 86115 . - . Parent=LTnewLM_260008300.1:pep;Name=PF02882;signature_desc=Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain;Ontology_term=GO:0003824,GO:0004488,GO:0009396,GO:0055114 LTnewLM_26 Pfam protein_match 86128 86475 . - . Parent=LTnewLM_260008300.1:pep;Name=PF00763;signature_desc=Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain;Ontology_term=GO:0003824,GO:0004488,GO:0009396,GO:0055114 ### LTnewLM_26 AUGUSTUS gene 88200 89708 0.99 - . ID=LTnewLM_260008400 LTnewLM_26 AUGUSTUS mRNA 88200 89708 0.99 - . ID=LTnewLM_260008400.1;Parent=LTnewLM_260008400 LTnewLM_26 AUGUSTUS CDS 88200 89708 0.99 - 0 ID=LTnewLM_260008400.1:CDS:1;Parent=LTnewLM_260008400.1 ### LTnewLM_26 . polypeptide 88200 89708 . - . ID=LTnewLM_260008400.1:pep;Derives_from=LTnewLM_260008400.1;orthologous_to=LmjF.26.0330_mRNA;ortholog_cluster=OG0003003;product=term%3DCyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00134 LTnewLM_26 Pfam protein_match 88596 88877 . - . Parent=LTnewLM_260008400.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_26 AUGUSTUS gene 90959 91987 1 - . ID=LTnewLM_260008500 LTnewLM_26 AUGUSTUS mRNA 90959 91987 1 - . ID=LTnewLM_260008500.1;Parent=LTnewLM_260008500 LTnewLM_26 AUGUSTUS CDS 90959 91987 1 - 0 ID=LTnewLM_260008500.1:CDS:1;Parent=LTnewLM_260008500.1 ### LTnewLM_26 . polypeptide 90959 91987 . - . ID=LTnewLM_260008500.1:pep;Derives_from=LTnewLM_260008500.1;orthologous_to=LmjF.26.0340_mRNA;ortholog_cluster=OG0003004;product=term%3DInosine-uridine preferring nucleoside hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01156 LTnewLM_26 Pfam protein_match 91001 91594 . - . Parent=LTnewLM_260008500.1:pep;Name=PF01156;signature_desc=Inosine-uridine preferring nucleoside hydrolase ### LTnewLM_26 AUGUSTUS gene 93180 95939 1 - . ID=LTnewLM_260008600 LTnewLM_26 AUGUSTUS mRNA 93180 95939 1 - . ID=LTnewLM_260008600.1;Parent=LTnewLM_260008600 LTnewLM_26 AUGUSTUS CDS 93180 95939 1 - 0 ID=LTnewLM_260008600.1:CDS:1;Parent=LTnewLM_260008600.1 ### LTnewLM_26 . polypeptide 93180 95939 . - . ID=LTnewLM_260008600.1:pep;Derives_from=LTnewLM_260008600.1;orthologous_to=LmjF.26.0350_mRNA;ortholog_cluster=OG0003005;product=term%3DVps52 / Sac2 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04129 LTnewLM_26 Pfam protein_match 94194 95069 . - . Parent=LTnewLM_260008600.1:pep;Name=PF04129;signature_desc=Vps52 / Sac2 family LTnewLM_26 Pfam protein_match 95154 95771 . - . Parent=LTnewLM_260008600.1:pep;Name=PF04129;signature_desc=Vps52 / Sac2 family ### LTnewLM_26 AUGUSTUS gene 96915 102491 1 - . ID=LTnewLM_260008700 LTnewLM_26 AUGUSTUS mRNA 96915 102491 1 - . ID=LTnewLM_260008700.1;Parent=LTnewLM_260008700 LTnewLM_26 AUGUSTUS CDS 96915 102491 1 - 0 ID=LTnewLM_260008700.1:CDS:1;Parent=LTnewLM_260008700.1 ### LTnewLM_26 . polypeptide 96915 102491 . - . ID=LTnewLM_260008700.1:pep;Derives_from=LTnewLM_260008700.1;orthologous_to=LmjF.26.0360_mRNA;ortholog_cluster=OG0003006;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 103330 105891 1 - . ID=LTnewLM_260008800 LTnewLM_26 AUGUSTUS mRNA 103330 105891 1 - . ID=LTnewLM_260008800.1;Parent=LTnewLM_260008800 LTnewLM_26 AUGUSTUS CDS 103330 105891 1 - 0 ID=LTnewLM_260008800.1:CDS:1;Parent=LTnewLM_260008800.1 ### LTnewLM_26 . polypeptide 103330 105891 . - . ID=LTnewLM_260008800.1:pep;Derives_from=LTnewLM_260008800.1;orthologous_to=LmjF.26.0370_mRNA;ortholog_cluster=OG0003007;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF13432;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 103777 103920 . - . Parent=LTnewLM_260008800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_26 Pfam protein_match 103879 103971 . - . Parent=LTnewLM_260008800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 105502 105624 . - . Parent=LTnewLM_260008800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_26 Pfam protein_match 105547 105642 . - . Parent=LTnewLM_260008800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 108337 109140 1 - . ID=LTnewLM_260008900 LTnewLM_26 AUGUSTUS mRNA 108337 109140 1 - . ID=LTnewLM_260008900.1;Parent=LTnewLM_260008900 LTnewLM_26 AUGUSTUS CDS 108337 109140 1 - 0 ID=LTnewLM_260008900.1:CDS:1;Parent=LTnewLM_260008900.1 ### LTnewLM_26 . polypeptide 108337 109140 . - . ID=LTnewLM_260008900.1:pep;Derives_from=LTnewLM_260008900.1;orthologous_to=LmjF.26.0380_mRNA;ortholog_cluster=OG0003008;product=term%3DRegulator of Vps4 activity in the MVB pathway%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03398 LTnewLM_26 Pfam protein_match 108556 109080 . - . Parent=LTnewLM_260008900.1:pep;Name=PF03398;signature_desc=Regulator of Vps4 activity in the MVB pathway ### LTnewLM_26 AUGUSTUS gene 109858 111390 1 - . ID=LTnewLM_260009000 LTnewLM_26 AUGUSTUS mRNA 109858 111390 1 - . ID=LTnewLM_260009000.1;Parent=LTnewLM_260009000 LTnewLM_26 AUGUSTUS CDS 109858 111390 1 - 0 ID=LTnewLM_260009000.1:CDS:1;Parent=LTnewLM_260009000.1 ### LTnewLM_26 . polypeptide 109858 111390 . - . ID=LTnewLM_260009000.1:pep;Derives_from=LTnewLM_260009000.1;orthologous_to=LmjF.26.0390_mRNA;ortholog_cluster=OG0003009;product=term%3DNucleotidyltransferase domain/RNA editing 3' terminal uridylyl transferase 2 middle domain/Cid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01909|Pfam:PF18528|Pfam:PF03828;Ontology_term=GO:0016779 LTnewLM_26 Pfam protein_match 110053 110229 . - . Parent=LTnewLM_260009000.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase LTnewLM_26 Pfam protein_match 110554 110829 . - . Parent=LTnewLM_260009000.1:pep;Name=PF18528;signature_desc=RNA editing 3' terminal uridylyl transferase 2 middle domain LTnewLM_26 Pfam protein_match 110968 111126 . - . Parent=LTnewLM_260009000.1:pep;Name=PF01909;signature_desc=Nucleotidyltransferase domain;Ontology_term=GO:0016779 ### LTnewLM_26 AUGUSTUS gene 111899 113590 1 - . ID=LTnewLM_260009100 LTnewLM_26 AUGUSTUS mRNA 111899 113590 1 - . ID=LTnewLM_260009100.1;Parent=LTnewLM_260009100 LTnewLM_26 AUGUSTUS CDS 111899 113590 1 - 0 ID=LTnewLM_260009100.1:CDS:1;Parent=LTnewLM_260009100.1 ### LTnewLM_26 . polypeptide 111899 113590 . - . ID=LTnewLM_260009100.1:pep;Derives_from=LTnewLM_260009100.1;orthologous_to=LmjF.26.0400_mRNA;ortholog_cluster=OG0003010;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13532 LTnewLM_26 Pfam protein_match 111968 112348 . - . Parent=LTnewLM_260009100.1:pep;Name=PF13532;signature_desc=2OG-Fe(II) oxygenase superfamily ### LTnewLM_26 AUGUSTUS gene 114460 114762 1 - . ID=LTnewLM_260009200 LTnewLM_26 AUGUSTUS mRNA 114460 114762 1 - . ID=LTnewLM_260009200.1;Parent=LTnewLM_260009200 LTnewLM_26 AUGUSTUS CDS 114460 114762 1 - 0 ID=LTnewLM_260009200.1:CDS:1;Parent=LTnewLM_260009200.1 ### LTnewLM_26 . polypeptide 114460 114762 . - . ID=LTnewLM_260009200.1:pep;Derives_from=LTnewLM_260009200.1;orthologous_to=LmjF.26.0410_mRNA;ortholog_cluster=OG0003011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 117219 119306 1 - . ID=LTnewLM_260009300 LTnewLM_26 AUGUSTUS mRNA 117219 119306 1 - . ID=LTnewLM_260009300.1;Parent=LTnewLM_260009300 LTnewLM_26 AUGUSTUS CDS 117219 119306 1 - 0 ID=LTnewLM_260009300.1:CDS:1;Parent=LTnewLM_260009300.1 ### LTnewLM_26 . polypeptide 117219 119306 . - . ID=LTnewLM_260009300.1:pep;Derives_from=LTnewLM_260009300.1;orthologous_to=LmjF.26.0420_mRNA;ortholog_cluster=OG0003012;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 120532 121458 1 - . ID=LTnewLM_260009400 LTnewLM_26 AUGUSTUS mRNA 120532 121458 1 - . ID=LTnewLM_260009400.1;Parent=LTnewLM_260009400 LTnewLM_26 AUGUSTUS CDS 120532 121458 1 - 0 ID=LTnewLM_260009400.1:CDS:1;Parent=LTnewLM_260009400.1 ### LTnewLM_26 . polypeptide 120532 121458 . - . ID=LTnewLM_260009400.1:pep;Derives_from=LTnewLM_260009400.1;orthologous_to=LmjF.26.0430_mRNA;ortholog_cluster=OG0003013;product=term%3DNUBPL iron-transfer P-loop NTPase/Anion-transporting ATPase/CobQ/CobB/MinD/ParA nucleotide binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10609|Pfam:PF02374|Pfam:PF01656 LTnewLM_26 Pfam protein_match 120565 121365 . - . Parent=LTnewLM_260009400.1:pep;Name=PF10609;signature_desc=NUBPL iron-transfer P-loop NTPase LTnewLM_26 Pfam protein_match 120643 121350 . - . Parent=LTnewLM_260009400.1:pep;Name=PF01656;signature_desc=CobQ/CobB/MinD/ParA nucleotide binding domain LTnewLM_26 Pfam protein_match 121264 121350 . - . Parent=LTnewLM_260009400.1:pep;Name=PF02374;signature_desc=Anion-transporting ATPase ### LTnewLM_26 AUGUSTUS gene 122719 123717 1 - . ID=LTnewLM_260009500 LTnewLM_26 AUGUSTUS mRNA 122719 123717 1 - . ID=LTnewLM_260009500.1;Parent=LTnewLM_260009500 LTnewLM_26 AUGUSTUS CDS 122719 123717 1 - 0 ID=LTnewLM_260009500.1:CDS:1;Parent=LTnewLM_260009500.1 ### LTnewLM_26 . polypeptide 122719 123717 . - . ID=LTnewLM_260009500.1:pep;Derives_from=LTnewLM_260009500.1;orthologous_to=LmjF.26.0440_mRNA;ortholog_cluster=OG0003014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 127496 127816 1 - . ID=LTnewLM_260009600 LTnewLM_26 AUGUSTUS mRNA 127496 127816 1 - . ID=LTnewLM_260009600.1;Parent=LTnewLM_260009600 LTnewLM_26 AUGUSTUS CDS 127496 127816 1 - 0 ID=LTnewLM_260009600.1:CDS:1;Parent=LTnewLM_260009600.1 ### LTnewLM_26 . polypeptide 127496 127816 . - . ID=LTnewLM_260009600.1:pep;Derives_from=LTnewLM_260009600.1;orthologous_to=LTnewLM_070018800.1,LTnewLM_240011600.1,LmjF.24.0630_mRNA,LmjF.26.0460_mRNA;ortholog_cluster=OG0000090;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_26 Pfam protein_match 127511 127693 . - . Parent=LTnewLM_260009600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_26 AUGUSTUS gene 128892 131849 1 - . ID=LTnewLM_260009700 LTnewLM_26 AUGUSTUS mRNA 128892 131849 1 - . ID=LTnewLM_260009700.1;Parent=LTnewLM_260009700 LTnewLM_26 AUGUSTUS CDS 128892 131849 1 - 0 ID=LTnewLM_260009700.1:CDS:1;Parent=LTnewLM_260009700.1 ### LTnewLM_26 . polypeptide 128892 131849 . - . ID=LTnewLM_260009700.1:pep;Derives_from=LTnewLM_260009700.1;orthologous_to=LmjF.26.0470_mRNA;ortholog_cluster=OG0003015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 133092 134072 1 - . ID=LTnewLM_260009800 LTnewLM_26 AUGUSTUS mRNA 133092 134072 1 - . ID=LTnewLM_260009800.1;Parent=LTnewLM_260009800 LTnewLM_26 AUGUSTUS CDS 133092 134072 1 - 0 ID=LTnewLM_260009800.1:CDS:1;Parent=LTnewLM_260009800.1 ### LTnewLM_26 . polypeptide 133092 134072 . - . ID=LTnewLM_260009800.1:pep;Derives_from=LTnewLM_260009800.1;orthologous_to=LmjF.26.0480_mRNA;ortholog_cluster=OG0003016;product=term%3DConserved hypothetical ATP binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03029 LTnewLM_26 Pfam protein_match 133458 134057 . - . Parent=LTnewLM_260009800.1:pep;Name=PF03029;signature_desc=Conserved hypothetical ATP binding protein ### LTnewLM_26 AUGUSTUS gene 135657 137456 1 - . ID=LTnewLM_260009900 LTnewLM_26 AUGUSTUS mRNA 135657 137456 1 - . ID=LTnewLM_260009900.1;Parent=LTnewLM_260009900 LTnewLM_26 AUGUSTUS CDS 135657 137456 1 - 0 ID=LTnewLM_260009900.1:CDS:1;Parent=LTnewLM_260009900.1 ### LTnewLM_26 . polypeptide 135657 137456 . - . ID=LTnewLM_260009900.1:pep;Derives_from=LTnewLM_260009900.1;orthologous_to=LTnewLM_360051100.1,LmjF.26.0490_mRNA;ortholog_cluster=OG0000402;product=term%3DCid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03828 LTnewLM_26 Pfam protein_match 135960 136064 . - . Parent=LTnewLM_260009900.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase ### LTnewLM_26 AUGUSTUS gene 139038 140474 1 - . ID=LTnewLM_260010000 LTnewLM_26 AUGUSTUS mRNA 139038 140474 1 - . ID=LTnewLM_260010000.1;Parent=LTnewLM_260010000 LTnewLM_26 AUGUSTUS CDS 139038 140474 1 - 0 ID=LTnewLM_260010000.1:CDS:1;Parent=LTnewLM_260010000.1 ### LTnewLM_26 . polypeptide 139038 140474 . - . ID=LTnewLM_260010000.1:pep;Derives_from=LTnewLM_260010000.1;orthologous_to=LmjF.26.0500_mRNA;ortholog_cluster=OG0003017;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_26 Pfam protein_match 139257 139307 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 139341 139403 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 139434 139478 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 139524 139580 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 139602 139664 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 139854 139919 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_26 Pfam protein_match 140187 140243 . - . Parent=LTnewLM_260010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_26 AUGUSTUS gene 142221 142451 1 - . ID=LTnewLM_260010100 LTnewLM_26 AUGUSTUS mRNA 142221 142451 1 - . ID=LTnewLM_260010100.1;Parent=LTnewLM_260010100 LTnewLM_26 AUGUSTUS CDS 142221 142451 1 - 0 ID=LTnewLM_260010100.1:CDS:1;Parent=LTnewLM_260010100.1 ### LTnewLM_26 . polypeptide 142221 142451 . - . ID=LTnewLM_260010100.1:pep;Derives_from=LTnewLM_260010100.1;product=term%3Dhypothetical protein ### LTnewLM_26 . polypeptide 142536 142871 . - . ID=LTnewLM_260010200.1:pep;Derives_from=LTnewLM_260010200.1;orthologous_to=LTnewLM_260010200.2,LTnewLM_260010200.3,LTnewLM_260010200.4;ortholog_cluster=OG0000183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . polypeptide 142536 143251 . - . ID=LTnewLM_260010200.2:pep;Derives_from=LTnewLM_260010200.2;orthologous_to=LTnewLM_260010200.1,LTnewLM_260010200.3,LTnewLM_260010200.4;ortholog_cluster=OG0000183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 142536 143350 2.97 - . ID=LTnewLM_260010200 LTnewLM_26 AUGUSTUS mRNA 142536 142871 1 - . ID=LTnewLM_260010200.1;Parent=LTnewLM_260010200 LTnewLM_26 AUGUSTUS CDS 142536 142871 1 - 0 ID=LTnewLM_260010200.1:CDS:1;Parent=LTnewLM_260010200.1 LTnewLM_26 AUGUSTUS mRNA 142536 143251 0.31 - . ID=LTnewLM_260010200.2;Parent=LTnewLM_260010200 LTnewLM_26 AUGUSTUS CDS 142536 142938 0.31 - 1 ID=LTnewLM_260010200.2:CDS:1;Parent=LTnewLM_260010200.2 LTnewLM_26 AUGUSTUS CDS 143091 143251 0.61 - 0 ID=LTnewLM_260010200.2:CDS:2;Parent=LTnewLM_260010200.2 LTnewLM_26 AUGUSTUS mRNA 143048 143251 1 - . ID=LTnewLM_260010200.3;Parent=LTnewLM_260010200 LTnewLM_26 AUGUSTUS CDS 143048 143251 1 - 0 ID=LTnewLM_260010200.3:CDS:1;Parent=LTnewLM_260010200.3 LTnewLM_26 AUGUSTUS mRNA 143048 143350 0.66 - . ID=LTnewLM_260010200.4;Parent=LTnewLM_260010200 LTnewLM_26 AUGUSTUS CDS 143048 143284 0.96 - 0 ID=LTnewLM_260010200.4:CDS:1;Parent=LTnewLM_260010200.4 LTnewLM_26 AUGUSTUS CDS 143330 143350 0.67 - 0 ID=LTnewLM_260010200.4:CDS:2;Parent=LTnewLM_260010200.4 ### LTnewLM_26 . polypeptide 143048 143251 . - . ID=LTnewLM_260010200.3:pep;Derives_from=LTnewLM_260010200.3;orthologous_to=LTnewLM_260010200.1,LTnewLM_260010200.2,LTnewLM_260010200.4;ortholog_cluster=OG0000183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . polypeptide 143048 143350 . - . ID=LTnewLM_260010200.4:pep;Derives_from=LTnewLM_260010200.4;orthologous_to=LTnewLM_260010200.1,LTnewLM_260010200.2,LTnewLM_260010200.3;ortholog_cluster=OG0000183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 143486 144795 0.58 - . ID=LTnewLM_260010300 LTnewLM_26 AUGUSTUS mRNA 143486 144795 0.58 - . ID=LTnewLM_260010300.1;Parent=LTnewLM_260010300 LTnewLM_26 AUGUSTUS CDS 143486 144008 0.73 - 1 ID=LTnewLM_260010300.1:CDS:1;Parent=LTnewLM_260010300.1 LTnewLM_26 AUGUSTUS CDS 144056 144795 0.58 - 0 ID=LTnewLM_260010300.1:CDS:2;Parent=LTnewLM_260010300.1 ### LTnewLM_26 . polypeptide 143486 144795 . - . ID=LTnewLM_260010300.1:pep;Derives_from=LTnewLM_260010300.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 144898 145296 0.95 - . ID=LTnewLM_260010400 LTnewLM_26 AUGUSTUS mRNA 144898 145296 0.95 - . ID=LTnewLM_260010400.1;Parent=LTnewLM_260010400 LTnewLM_26 AUGUSTUS CDS 144898 145296 0.95 - 0 ID=LTnewLM_260010400.1:CDS:1;Parent=LTnewLM_260010400.1 ### LTnewLM_26 . polypeptide 144898 145296 . - . ID=LTnewLM_260010400.1:pep;Derives_from=LTnewLM_260010400.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 145618 146397 0.69 - . ID=LTnewLM_260010500 LTnewLM_26 AUGUSTUS mRNA 145618 146397 0.32 - . ID=LTnewLM_260010500.1;Parent=LTnewLM_260010500 LTnewLM_26 AUGUSTUS CDS 145618 145767 0.58 - 0 ID=LTnewLM_260010500.1:CDS:1;Parent=LTnewLM_260010500.1 LTnewLM_26 AUGUSTUS CDS 146248 146397 0.59 - 0 ID=LTnewLM_260010500.1:CDS:2;Parent=LTnewLM_260010500.1 LTnewLM_26 AUGUSTUS mRNA 146127 146397 0.37 - . ID=LTnewLM_260010500.2;Parent=LTnewLM_260010500 LTnewLM_26 AUGUSTUS CDS 146127 146301 0.48 - 1 ID=LTnewLM_260010500.2:CDS:1;Parent=LTnewLM_260010500.2 LTnewLM_26 AUGUSTUS CDS 146345 146397 0.37 - 0 ID=LTnewLM_260010500.2:CDS:2;Parent=LTnewLM_260010500.2 ### LTnewLM_26 . polypeptide 145618 146397 . - . ID=LTnewLM_260010500.1:pep;Derives_from=LTnewLM_260010500.1;orthologous_to=LTnewLM_260010500.2;ortholog_cluster=OG0003018;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . polypeptide 146127 146397 . - . ID=LTnewLM_260010500.2:pep;Derives_from=LTnewLM_260010500.2;orthologous_to=LTnewLM_260010500.1;ortholog_cluster=OG0003018;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 147756 151223 1 - . ID=LTnewLM_260010600 LTnewLM_26 AUGUSTUS mRNA 147756 151223 1 - . ID=LTnewLM_260010600.1;Parent=LTnewLM_260010600 LTnewLM_26 AUGUSTUS CDS 147756 151223 1 - 0 ID=LTnewLM_260010600.1:CDS:1;Parent=LTnewLM_260010600.1 ### LTnewLM_26 . polypeptide 147756 151223 . - . ID=LTnewLM_260010600.1:pep;Derives_from=LTnewLM_260010600.1;orthologous_to=LmjF.26.0540_mRNA;ortholog_cluster=OG0003019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 152731 154509 1 - . ID=LTnewLM_260010700 LTnewLM_26 AUGUSTUS mRNA 152731 154509 1 - . ID=LTnewLM_260010700.1;Parent=LTnewLM_260010700 LTnewLM_26 AUGUSTUS CDS 152731 154509 1 - 0 ID=LTnewLM_260010700.1:CDS:1;Parent=LTnewLM_260010700.1 ### LTnewLM_26 . polypeptide 152731 154509 . - . ID=LTnewLM_260010700.1:pep;Derives_from=LTnewLM_260010700.1;orthologous_to=LmjF.26.0550_mRNA;ortholog_cluster=OG0003020;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 155608 157716 1 - . ID=LTnewLM_260010800 LTnewLM_26 AUGUSTUS mRNA 155608 157716 1 - . ID=LTnewLM_260010800.1;Parent=LTnewLM_260010800 LTnewLM_26 AUGUSTUS CDS 155608 157716 1 - 0 ID=LTnewLM_260010800.1:CDS:1;Parent=LTnewLM_260010800.1 ### LTnewLM_26 . polypeptide 155608 157716 . - . ID=LTnewLM_260010800.1:pep;Derives_from=LTnewLM_260010800.1;orthologous_to=LmjF.26.0560_mRNA;ortholog_cluster=OG0003021;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 158808 159260 1 - . ID=LTnewLM_260010900 LTnewLM_26 AUGUSTUS mRNA 158808 159260 1 - . ID=LTnewLM_260010900.1;Parent=LTnewLM_260010900 LTnewLM_26 AUGUSTUS CDS 158808 159260 1 - 0 ID=LTnewLM_260010900.1:CDS:1;Parent=LTnewLM_260010900.1 ### LTnewLM_26 . polypeptide 158808 159260 . - . ID=LTnewLM_260010900.1:pep;Derives_from=LTnewLM_260010900.1;orthologous_to=LmjF.26.0570_mRNA;ortholog_cluster=OG0003022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 160091 161824 1 - . ID=LTnewLM_260011000 LTnewLM_26 AUGUSTUS mRNA 160091 161824 1 - . ID=LTnewLM_260011000.1;Parent=LTnewLM_260011000 LTnewLM_26 AUGUSTUS CDS 160091 161824 1 - 0 ID=LTnewLM_260011000.1:CDS:1;Parent=LTnewLM_260011000.1 ### LTnewLM_26 . polypeptide 160091 161824 . - . ID=LTnewLM_260011000.1:pep;Derives_from=LTnewLM_260011000.1;orthologous_to=LmjF.26.0580_mRNA;ortholog_cluster=OG0003023;product=term%3DApaG domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04379 LTnewLM_26 Pfam protein_match 160379 160639 . - . Parent=LTnewLM_260011000.1:pep;Name=PF04379;signature_desc=ApaG domain ### LTnewLM_26 AUGUSTUS gene 165908 168017 1 - . ID=LTnewLM_260011100 LTnewLM_26 AUGUSTUS mRNA 165908 168017 1 - . ID=LTnewLM_260011100.1;Parent=LTnewLM_260011100 LTnewLM_26 AUGUSTUS CDS 165908 167890 1 - 0 ID=LTnewLM_260011100.1:CDS:1;Parent=LTnewLM_260011100.1 LTnewLM_26 AUGUSTUS CDS 168000 168017 1 - 0 ID=LTnewLM_260011100.1:CDS:2;Parent=LTnewLM_260011100.1 ### LTnewLM_26 . polypeptide 165908 168017 . - . ID=LTnewLM_260011100.1:pep;Derives_from=LTnewLM_260011100.1;orthologous_to=LmjF.26.0590_mRNA;ortholog_cluster=OG0003024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 168553 169551 1 - . ID=LTnewLM_260011200 LTnewLM_26 AUGUSTUS mRNA 168553 169551 1 - . ID=LTnewLM_260011200.1;Parent=LTnewLM_260011200 LTnewLM_26 AUGUSTUS CDS 168553 169551 1 - 0 ID=LTnewLM_260011200.1:CDS:1;Parent=LTnewLM_260011200.1 ### LTnewLM_26 . polypeptide 168553 169551 . - . ID=LTnewLM_260011200.1:pep;Derives_from=LTnewLM_260011200.1;orthologous_to=LmjF.26.0600_mRNA;ortholog_cluster=OG0003025;product=term%3DMyosin-like coiled-coil protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09728;Ontology_term=GO:0019905 LTnewLM_26 Pfam protein_match 168577 169422 . - . Parent=LTnewLM_260011200.1:pep;Name=PF09728;signature_desc=Myosin-like coiled-coil protein;Ontology_term=GO:0019905 ### LTnewLM_26 AUGUSTUS gene 171018 172205 1 - . ID=LTnewLM_260011300 LTnewLM_26 AUGUSTUS mRNA 171018 172205 1 - . ID=LTnewLM_260011300.1;Parent=LTnewLM_260011300 LTnewLM_26 AUGUSTUS CDS 171018 172205 1 - 0 ID=LTnewLM_260011300.1:CDS:1;Parent=LTnewLM_260011300.1 ### LTnewLM_26 . polypeptide 171018 172205 . - . ID=LTnewLM_260011300.1:pep;Derives_from=LTnewLM_260011300.1;orthologous_to=LmjF.26.0610_mRNA;ortholog_cluster=OG0003026;product=term%3DPentacotripeptide-repeat region of PRORP/Pentatricopeptide repeat domain/PPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17177|Pfam:PF13812|Pfam:PF01535 LTnewLM_26 Pfam protein_match 171342 171764 . - . Parent=LTnewLM_260011300.1:pep;Name=PF17177;signature_desc=Pentacotripeptide-repeat region of PRORP LTnewLM_26 Pfam protein_match 171504 171590 . - . Parent=LTnewLM_260011300.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_26 Pfam protein_match 171567 171728 . - . Parent=LTnewLM_260011300.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_26 Pfam protein_match 171618 171698 . - . Parent=LTnewLM_260011300.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_26 AUGUSTUS gene 174005 174307 1 - . ID=LTnewLM_260011400 LTnewLM_26 AUGUSTUS mRNA 174005 174307 1 - . ID=LTnewLM_260011400.1;Parent=LTnewLM_260011400 LTnewLM_26 AUGUSTUS CDS 174005 174307 1 - 0 ID=LTnewLM_260011400.1:CDS:1;Parent=LTnewLM_260011400.1 ### LTnewLM_26 . polypeptide 174005 174307 . - . ID=LTnewLM_260011400.1:pep;Derives_from=LTnewLM_260011400.1;orthologous_to=LmjF.26.0620_mRNA;ortholog_cluster=OG0003027;product=term%3DChaperonin 10 Kd subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00166;Ontology_term=GO:0006457,GO:0005737 LTnewLM_26 Pfam protein_match 174020 174277 . - . Parent=LTnewLM_260011400.1:pep;Name=PF00166;signature_desc=Chaperonin 10 Kd subunit;Ontology_term=GO:0006457,GO:0005737 ### LTnewLM_26 AUGUSTUS gene 175758 177002 1 - . ID=LTnewLM_260011500 LTnewLM_26 AUGUSTUS mRNA 175758 177002 1 - . ID=LTnewLM_260011500.1;Parent=LTnewLM_260011500 LTnewLM_26 AUGUSTUS CDS 175758 177002 1 - 0 ID=LTnewLM_260011500.1:CDS:1;Parent=LTnewLM_260011500.1 ### LTnewLM_26 . polypeptide 175758 177002 . - . ID=LTnewLM_260011500.1:pep;Derives_from=LTnewLM_260011500.1;orthologous_to=LmjF.26.0630_mRNA;ortholog_cluster=OG0003028;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 179128 179430 1 - . ID=LTnewLM_260011600 LTnewLM_26 AUGUSTUS mRNA 179128 179430 1 - . ID=LTnewLM_260011600.1;Parent=LTnewLM_260011600 LTnewLM_26 AUGUSTUS CDS 179128 179430 1 - 0 ID=LTnewLM_260011600.1:CDS:1;Parent=LTnewLM_260011600.1 ### LTnewLM_26 . polypeptide 179128 179430 . - . ID=LTnewLM_260011600.1:pep;Derives_from=LTnewLM_260011600.1;product=term%3DChaperonin 10 Kd subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00166;Ontology_term=GO:0006457,GO:0005737 LTnewLM_26 Pfam protein_match 179143 179400 . - . Parent=LTnewLM_260011600.1:pep;Name=PF00166;signature_desc=Chaperonin 10 Kd subunit;Ontology_term=GO:0006457,GO:0005737 ### LTnewLM_26 AUGUSTUS gene 180362 184735 1 - . ID=LTnewLM_260011700 LTnewLM_26 AUGUSTUS mRNA 180362 184735 1 - . ID=LTnewLM_260011700.1;Parent=LTnewLM_260011700 LTnewLM_26 AUGUSTUS CDS 180362 184735 1 - 0 ID=LTnewLM_260011700.1:CDS:1;Parent=LTnewLM_260011700.1 ### LTnewLM_26 . polypeptide 180362 184735 . - . ID=LTnewLM_260011700.1:pep;Derives_from=LTnewLM_260011700.1;orthologous_to=LmjF.26.0650_mRNA;ortholog_cluster=OG0003029;product=term%3DCilia- and flagella-associated protein 61%2C N-terminal domain/Pyridine nucleotide-disulphide oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16092|Pfam:PF07992;Ontology_term=GO:0055114,GO:0016491 LTnewLM_26 Pfam protein_match 181463 182422 . - . Parent=LTnewLM_260011700.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_26 Pfam protein_match 183794 184207 . - . Parent=LTnewLM_260011700.1:pep;Name=PF16092;signature_desc=Cilia- and flagella-associated protein 61%2C N-terminal domain ### LTnewLM_26 AUGUSTUS gene 186292 187425 1 - . ID=LTnewLM_260011800 LTnewLM_26 AUGUSTUS mRNA 186292 187425 1 - . ID=LTnewLM_260011800.1;Parent=LTnewLM_260011800 LTnewLM_26 AUGUSTUS CDS 186292 187425 1 - 0 ID=LTnewLM_260011800.1:CDS:1;Parent=LTnewLM_260011800.1 ### LTnewLM_26 . polypeptide 186292 187425 . - . ID=LTnewLM_260011800.1:pep;Derives_from=LTnewLM_260011800.1;orthologous_to=LmjF.26.0660_mRNA;ortholog_cluster=OG0003030;product=term%3DOST3 / OST6 family%2C transporter family/Thioredoxin/Thioredoxin-like domain/Endoplasmic reticulum protein ERp29%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04756|Pfam:PF00085|Pfam:PF13098|Pfam:PF07749;Ontology_term=GO:0005783,GO:0045454 LTnewLM_26 Pfam protein_match 186316 186585 . - . Parent=LTnewLM_260011800.1:pep;Name=PF07749;signature_desc=Endoplasmic reticulum protein ERp29%2C C-terminal domain;Ontology_term=GO:0005783 LTnewLM_26 Pfam protein_match 186640 186951 . - . Parent=LTnewLM_260011800.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_26 Pfam protein_match 186706 186909 . - . Parent=LTnewLM_260011800.1:pep;Name=PF13098;signature_desc=Thioredoxin-like domain LTnewLM_26 Pfam protein_match 186997 187329 . - . Parent=LTnewLM_260011800.1:pep;Name=PF04756;signature_desc=OST3 / OST6 family%2C transporter family LTnewLM_26 Pfam protein_match 187009 187326 . - . Parent=LTnewLM_260011800.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_26 Pfam protein_match 187012 187287 . - . Parent=LTnewLM_260011800.1:pep;Name=PF13098;signature_desc=Thioredoxin-like domain ### LTnewLM_26 . pseudogene 188366 188863 . - . ID=LTnewLM_260011900:pseudogene;coverage=0.978;sequence_ID=0.858;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.0670_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 188366 188863 . - . ID=LTnewLM_260011900.1;Parent=LTnewLM_260011900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 188366 188863 . - . ID=LTnewLM_260011900.1:pseudogenic_exon:1;Parent=LTnewLM_260011900.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 188366 188863 . - . ID=LTnewLM_260011900.1:pep;Derives_from=LTnewLM_260011900.1;orthologous_to=LmjF.26.0670_mRNA;ortholog_cluster=OG0007546;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_26 Pfam protein_match 188426 188725 . - . Parent=LTnewLM_260011900.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_26 AUGUSTUS gene 190030 190707 1 - . ID=LTnewLM_260012000 LTnewLM_26 AUGUSTUS mRNA 190030 190707 1 - . ID=LTnewLM_260012000.1;Parent=LTnewLM_260012000 LTnewLM_26 AUGUSTUS CDS 190030 190707 1 - 0 ID=LTnewLM_260012000.1:CDS:1;Parent=LTnewLM_260012000.1 ### LTnewLM_26 . polypeptide 190030 190707 . - . ID=LTnewLM_260012000.1:pep;Derives_from=LTnewLM_260012000.1;orthologous_to=LmjF.26.0680_mRNA;ortholog_cluster=OG0003031;product=term%3DER membrane protein complex subunit 7%2C beta-sandwich domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09430 LTnewLM_26 Pfam protein_match 190189 190554 . - . Parent=LTnewLM_260012000.1:pep;Name=PF09430;signature_desc=ER membrane protein complex subunit 7%2C beta-sandwich domain ### LTnewLM_26 AUGUSTUS gene 191802 192554 1 - . ID=LTnewLM_260012100 LTnewLM_26 AUGUSTUS mRNA 191802 192554 1 - . ID=LTnewLM_260012100.1;Parent=LTnewLM_260012100 LTnewLM_26 AUGUSTUS CDS 191802 192554 1 - 0 ID=LTnewLM_260012100.1:CDS:1;Parent=LTnewLM_260012100.1 ### LTnewLM_26 . polypeptide 191802 192554 . - . ID=LTnewLM_260012100.1:pep;Derives_from=LTnewLM_260012100.1;orthologous_to=LmjF.26.0690_mRNA;ortholog_cluster=OG0003032;product=term%3DSNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05739;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 191820 191969 . - . Parent=LTnewLM_260012100.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 193517 195049 1 - . ID=LTnewLM_260012200 LTnewLM_26 AUGUSTUS mRNA 193517 195049 1 - . ID=LTnewLM_260012200.1;Parent=LTnewLM_260012200 LTnewLM_26 AUGUSTUS CDS 193517 195049 1 - 0 ID=LTnewLM_260012200.1:CDS:1;Parent=LTnewLM_260012200.1 ### LTnewLM_26 . polypeptide 193517 195049 . - . ID=LTnewLM_260012200.1:pep;Derives_from=LTnewLM_260012200.1;orthologous_to=LmjF.26.0700_mRNA;ortholog_cluster=OG0003033;product=term%3DPentapeptide repeats (9 copies)/Pentapeptide repeats (8 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13599|Pfam:PF00805 LTnewLM_26 Pfam protein_match 193820 193993 . - . Parent=LTnewLM_260012200.1:pep;Name=PF13599;signature_desc=Pentapeptide repeats (9 copies) LTnewLM_26 Pfam protein_match 193826 193930 . - . Parent=LTnewLM_260012200.1:pep;Name=PF00805;signature_desc=Pentapeptide repeats (8 copies) ### LTnewLM_26 AUGUSTUS gene 197121 199928 1 - . ID=LTnewLM_260012300 LTnewLM_26 AUGUSTUS mRNA 197121 199928 1 - . ID=LTnewLM_260012300.1;Parent=LTnewLM_260012300 LTnewLM_26 AUGUSTUS CDS 197121 199928 1 - 0 ID=LTnewLM_260012300.1:CDS:1;Parent=LTnewLM_260012300.1 ### LTnewLM_26 . polypeptide 197121 199928 . - . ID=LTnewLM_260012300.1:pep;Derives_from=LTnewLM_260012300.1;orthologous_to=LmjF.26.0710_mRNA;ortholog_cluster=OG0003034;product=term%3DDiacylglycerol kinase catalytic domain/YegS C-terminal NAD kinase beta sandwich-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00781|Pfam:PF19279;Ontology_term=GO:0004143,GO:0007205 LTnewLM_26 Pfam protein_match 197139 197450 . - . Parent=LTnewLM_260012300.1:pep;Name=PF19279;signature_desc=YegS C-terminal NAD kinase beta sandwich-like domain LTnewLM_26 Pfam protein_match 198660 198893 . - . Parent=LTnewLM_260012300.1:pep;Name=PF00781;signature_desc=Diacylglycerol kinase catalytic domain;Ontology_term=GO:0004143,GO:0007205 ### LTnewLM_26 AUGUSTUS gene 201954 205226 1 - . ID=LTnewLM_260012400 LTnewLM_26 AUGUSTUS mRNA 201954 205226 1 - . ID=LTnewLM_260012400.1;Parent=LTnewLM_260012400 LTnewLM_26 AUGUSTUS CDS 201954 205226 1 - 0 ID=LTnewLM_260012400.1:CDS:1;Parent=LTnewLM_260012400.1 ### LTnewLM_26 . polypeptide 201954 205226 . - . ID=LTnewLM_260012400.1:pep;Derives_from=LTnewLM_260012400.1;orthologous_to=LmjF.26.0720_mRNA;ortholog_cluster=OG0003035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 206256 212372 1 - . ID=LTnewLM_260012500 LTnewLM_26 AUGUSTUS mRNA 206256 212372 1 - . ID=LTnewLM_260012500.1;Parent=LTnewLM_260012500 LTnewLM_26 AUGUSTUS CDS 206256 212372 1 - 0 ID=LTnewLM_260012500.1:CDS:1;Parent=LTnewLM_260012500.1 ### LTnewLM_26 . polypeptide 206256 212372 . - . ID=LTnewLM_260012500.1:pep;Derives_from=LTnewLM_260012500.1;orthologous_to=LmjF.26.0730_mRNA;ortholog_cluster=OG0003036;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 217182 219713 1 - . ID=LTnewLM_260012600 LTnewLM_26 AUGUSTUS mRNA 217182 219713 1 - . ID=LTnewLM_260012600.1;Parent=LTnewLM_260012600 LTnewLM_26 AUGUSTUS CDS 217182 219713 1 - 0 ID=LTnewLM_260012600.1:CDS:1;Parent=LTnewLM_260012600.1 ### LTnewLM_26 . polypeptide 217182 219713 . - . ID=LTnewLM_260012600.1:pep;Derives_from=LTnewLM_260012600.1;orthologous_to=LmjF.26.0740_mRNA;ortholog_cluster=OG0003037;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_26 Pfam protein_match 217617 217745 . - . Parent=LTnewLM_260012600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 217929 218000 . - . Parent=LTnewLM_260012600.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 217962 218114 . - . Parent=LTnewLM_260012600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 218082 218168 . - . Parent=LTnewLM_260012600.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 218130 218303 . - . Parent=LTnewLM_260012600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 218601 218744 . - . Parent=LTnewLM_260012600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 218706 218792 . - . Parent=LTnewLM_260012600.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 218754 218900 . - . Parent=LTnewLM_260012600.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_26 AUGUSTUS gene 220940 226207 1 - . ID=LTnewLM_260012700 LTnewLM_26 AUGUSTUS mRNA 220940 226207 1 - . ID=LTnewLM_260012700.1;Parent=LTnewLM_260012700 LTnewLM_26 AUGUSTUS CDS 220940 226207 1 - 0 ID=LTnewLM_260012700.1:CDS:1;Parent=LTnewLM_260012700.1 ### LTnewLM_26 . polypeptide 220940 226207 . - . ID=LTnewLM_260012700.1:pep;Derives_from=LTnewLM_260012700.1;orthologous_to=LmjF.26.0750_mRNA;ortholog_cluster=OG0003038;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_26 Pfam protein_match 222938 223087 . - . Parent=LTnewLM_260012700.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 223562 223699 . - . Parent=LTnewLM_260012700.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 223664 223750 . - . Parent=LTnewLM_260012700.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 223712 223858 . - . Parent=LTnewLM_260012700.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_26 Pfam protein_match 224213 224377 . - . Parent=LTnewLM_260012700.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_26 AUGUSTUS gene 227014 227490 1 - . ID=LTnewLM_260012800 LTnewLM_26 AUGUSTUS mRNA 227014 227490 1 - . ID=LTnewLM_260012800.1;Parent=LTnewLM_260012800 LTnewLM_26 AUGUSTUS CDS 227014 227490 1 - 0 ID=LTnewLM_260012800.1:CDS:1;Parent=LTnewLM_260012800.1 ### LTnewLM_26 . polypeptide 227014 227490 . - . ID=LTnewLM_260012800.1:pep;Derives_from=LTnewLM_260012800.1;orthologous_to=LmjF.26.0760_mRNA;ortholog_cluster=OG0003039;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_26 Pfam protein_match 227188 227355 . - . Parent=LTnewLM_260012800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_26 AUGUSTUS gene 228290 229924 1 - . ID=LTnewLM_260012900 LTnewLM_26 AUGUSTUS mRNA 228290 229924 1 - . ID=LTnewLM_260012900.1;Parent=LTnewLM_260012900 LTnewLM_26 AUGUSTUS CDS 228290 229924 1 - 0 ID=LTnewLM_260012900.1:CDS:1;Parent=LTnewLM_260012900.1 ### LTnewLM_26 . polypeptide 228290 229924 . - . ID=LTnewLM_260012900.1:pep;Derives_from=LTnewLM_260012900.1;orthologous_to=LmjF.26.0770_mRNA;ortholog_cluster=OG0003040;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 231116 231328 1 - . ID=LTnewLM_260013000 LTnewLM_26 AUGUSTUS mRNA 231116 231328 1 - . ID=LTnewLM_260013000.1;Parent=LTnewLM_260013000 LTnewLM_26 AUGUSTUS CDS 231116 231328 1 - 0 ID=LTnewLM_260013000.1:CDS:1;Parent=LTnewLM_260013000.1 ### LTnewLM_26 . polypeptide 231116 231328 . - . ID=LTnewLM_260013000.1:pep;Derives_from=LTnewLM_260013000.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 231926 232390 1 - . ID=LTnewLM_260013100 LTnewLM_26 AUGUSTUS mRNA 231926 232390 1 - . ID=LTnewLM_260013100.1;Parent=LTnewLM_260013100 LTnewLM_26 AUGUSTUS CDS 231926 232390 1 - 0 ID=LTnewLM_260013100.1:CDS:1;Parent=LTnewLM_260013100.1 ### LTnewLM_26 . polypeptide 231926 232390 . - . ID=LTnewLM_260013100.1:pep;Derives_from=LTnewLM_260013100.1;orthologous_to=LmjF.26.0780_mRNA;ortholog_cluster=OG0003041;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_26 Pfam protein_match 232037 232252 . - . Parent=LTnewLM_260013100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_26 AUGUSTUS gene 232995 233393 1 - . ID=LTnewLM_260013200 LTnewLM_26 AUGUSTUS mRNA 232995 233393 1 - . ID=LTnewLM_260013200.1;Parent=LTnewLM_260013200 LTnewLM_26 AUGUSTUS CDS 232995 233393 1 - 0 ID=LTnewLM_260013200.1:CDS:1;Parent=LTnewLM_260013200.1 ### LTnewLM_26 . polypeptide 232995 233393 . - . ID=LTnewLM_260013200.1:pep;Derives_from=LTnewLM_260013200.1;orthologous_to=LmjF.26.0790_mRNA;ortholog_cluster=OG0003042;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 235732 236283 1 - . ID=LTnewLM_260013300 LTnewLM_26 AUGUSTUS mRNA 235732 236283 1 - . ID=LTnewLM_260013300.1;Parent=LTnewLM_260013300 LTnewLM_26 AUGUSTUS CDS 235732 236283 1 - 0 ID=LTnewLM_260013300.1:CDS:1;Parent=LTnewLM_260013300.1 ### LTnewLM_26 . polypeptide 235732 236283 . - . ID=LTnewLM_260013300.1:pep;Derives_from=LTnewLM_260013300.1;orthologous_to=LmjF.26.0800_mRNA;ortholog_cluster=OG0003043;product=term%3DGlutathione peroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00255;Ontology_term=GO:0006979,GO:0004602,GO:0055114 LTnewLM_26 Pfam protein_match 235906 236229 . - . Parent=LTnewLM_260013300.1:pep;Name=PF00255;signature_desc=Glutathione peroxidase;Ontology_term=GO:0004602,GO:0006979,GO:0055114 ### LTnewLM_26 AUGUSTUS gene 237844 238368 1 - . ID=LTnewLM_260013400 LTnewLM_26 AUGUSTUS mRNA 237844 238368 1 - . ID=LTnewLM_260013400.1;Parent=LTnewLM_260013400 LTnewLM_26 AUGUSTUS CDS 237844 238368 1 - 0 ID=LTnewLM_260013400.1:CDS:1;Parent=LTnewLM_260013400.1 ### LTnewLM_26 . polypeptide 237844 238368 . - . ID=LTnewLM_260013400.1:pep;Derives_from=LTnewLM_260013400.1;orthologous_to=LmjF.26.0820_mRNA;ortholog_cluster=OG0003044;product=term%3DGlutathione peroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00255;Ontology_term=GO:0006979,GO:0004602,GO:0055114 LTnewLM_26 Pfam protein_match 238039 238362 . - . Parent=LTnewLM_260013400.1:pep;Name=PF00255;signature_desc=Glutathione peroxidase;Ontology_term=GO:0004602,GO:0006979,GO:0055114 ### LTnewLM_26 AUGUSTUS gene 241019 242080 1 - . ID=LTnewLM_260013500 LTnewLM_26 AUGUSTUS mRNA 241019 242080 1 - . ID=LTnewLM_260013500.1;Parent=LTnewLM_260013500 LTnewLM_26 AUGUSTUS CDS 241019 242080 1 - 0 ID=LTnewLM_260013500.1:CDS:1;Parent=LTnewLM_260013500.1 ### LTnewLM_26 . polypeptide 241019 242080 . - . ID=LTnewLM_260013500.1:pep;Derives_from=LTnewLM_260013500.1;orthologous_to=LmjF.26.0830_mRNA;ortholog_cluster=OG0003045;product=term%3DAspartate-ammonia ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03590;Ontology_term=GO:0004071,GO:0005737,GO:0006529 LTnewLM_26 Pfam protein_match 241280 242047 . - . Parent=LTnewLM_260013500.1:pep;Name=PF03590;signature_desc=Aspartate-ammonia ligase;Ontology_term=GO:0004071,GO:0006529,GO:0005737 ### LTnewLM_26 AUGUSTUS gene 242920 246174 1 - . ID=LTnewLM_260013600 LTnewLM_26 AUGUSTUS mRNA 242920 246174 1 - . ID=LTnewLM_260013600.1;Parent=LTnewLM_260013600 LTnewLM_26 AUGUSTUS CDS 242920 246174 1 - 0 ID=LTnewLM_260013600.1:CDS:1;Parent=LTnewLM_260013600.1 ### LTnewLM_26 . polypeptide 242920 246174 . - . ID=LTnewLM_260013600.1:pep;Derives_from=LTnewLM_260013600.1;orthologous_to=LmjF.26.0840_mRNA;ortholog_cluster=OG0003046;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 246698 247951 0.99 - . ID=LTnewLM_260013700 LTnewLM_26 AUGUSTUS mRNA 246698 247951 0.99 - . ID=LTnewLM_260013700.1;Parent=LTnewLM_260013700 LTnewLM_26 AUGUSTUS CDS 246698 247951 0.99 - 0 ID=LTnewLM_260013700.1:CDS:1;Parent=LTnewLM_260013700.1 ### LTnewLM_26 . polypeptide 246698 247951 . - . ID=LTnewLM_260013700.1:pep;Derives_from=LTnewLM_260013700.1;orthologous_to=LmjF.26.0850_mRNA;ortholog_cluster=OG0003047;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 248924 251905 1 - . ID=LTnewLM_260013800 LTnewLM_26 AUGUSTUS mRNA 248924 251905 1 - . ID=LTnewLM_260013800.1;Parent=LTnewLM_260013800 LTnewLM_26 AUGUSTUS CDS 248924 251905 1 - 0 ID=LTnewLM_260013800.1:CDS:1;Parent=LTnewLM_260013800.1 ### LTnewLM_26 . polypeptide 248924 251905 . - . ID=LTnewLM_260013800.1:pep;Derives_from=LTnewLM_260013800.1;orthologous_to=LmjF.26.0860_mRNA;ortholog_cluster=OG0003048;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_26 Pfam protein_match 249056 249856 . - . Parent=LTnewLM_260013800.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_26 AUGUSTUS gene 253654 256089 0.47 - . ID=LTnewLM_260013900 LTnewLM_26 AUGUSTUS mRNA 253654 256089 0.47 - . ID=LTnewLM_260013900.1;Parent=LTnewLM_260013900 LTnewLM_26 AUGUSTUS CDS 253654 253715 0.97 - 2 ID=LTnewLM_260013900.1:CDS:1;Parent=LTnewLM_260013900.1 LTnewLM_26 AUGUSTUS CDS 253764 256089 0.47 - 0 ID=LTnewLM_260013900.1:CDS:2;Parent=LTnewLM_260013900.1 ### LTnewLM_26 . polypeptide 253654 256089 . - . ID=LTnewLM_260013900.1:pep;Derives_from=LTnewLM_260013900.1;orthologous_to=LmjF.26.0870_mRNA;ortholog_cluster=OG0003049;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 257777 258226 1 - . ID=LTnewLM_260014000 LTnewLM_26 AUGUSTUS mRNA 257777 258226 1 - . ID=LTnewLM_260014000.1;Parent=LTnewLM_260014000 LTnewLM_26 AUGUSTUS CDS 257777 258226 1 - 0 ID=LTnewLM_260014000.1:CDS:1;Parent=LTnewLM_260014000.1 ### LTnewLM_26 . polypeptide 257777 258226 . - . ID=LTnewLM_260014000.1:pep;Derives_from=LTnewLM_260014000.1;orthologous_to=LTnewLM_260014100.1,LmjF.26.0880_mRNA,LmjF.26.0890_mRNA;ortholog_cluster=OG0000184;product=term%3DRibosomal protein S9/S16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00380;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_26 Pfam protein_match 257783 258181 . - . Parent=LTnewLM_260014000.1:pep;Name=PF00380;signature_desc=Ribosomal protein S9/S16;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 259310 259759 1 - . ID=LTnewLM_260014100 LTnewLM_26 AUGUSTUS mRNA 259310 259759 1 - . ID=LTnewLM_260014100.1;Parent=LTnewLM_260014100 LTnewLM_26 AUGUSTUS CDS 259310 259759 1 - 0 ID=LTnewLM_260014100.1:CDS:1;Parent=LTnewLM_260014100.1 ### LTnewLM_26 . polypeptide 259310 259759 . - . ID=LTnewLM_260014100.1:pep;Derives_from=LTnewLM_260014100.1;orthologous_to=LTnewLM_260014000.1,LmjF.26.0880_mRNA,LmjF.26.0890_mRNA;ortholog_cluster=OG0000184;product=term%3DRibosomal protein S9/S16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00380;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_26 Pfam protein_match 259316 259714 . - . Parent=LTnewLM_260014100.1:pep;Name=PF00380;signature_desc=Ribosomal protein S9/S16;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 260935 263769 1 - . ID=LTnewLM_260014200 LTnewLM_26 AUGUSTUS mRNA 260935 263769 1 - . ID=LTnewLM_260014200.1;Parent=LTnewLM_260014200 LTnewLM_26 AUGUSTUS CDS 260935 263769 1 - 0 ID=LTnewLM_260014200.1:CDS:1;Parent=LTnewLM_260014200.1 ### LTnewLM_26 . polypeptide 260935 263769 . - . ID=LTnewLM_260014200.1:pep;Derives_from=LTnewLM_260014200.1;orthologous_to=LmjF.26.0900_mRNA;ortholog_cluster=OG0003050;product=term%3DHsp70 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012 LTnewLM_26 Pfam protein_match 262144 262761 . - . Parent=LTnewLM_260014200.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_26 Pfam protein_match 262954 263493 . - . Parent=LTnewLM_260014200.1:pep;Name=PF00012;signature_desc=Hsp70 protein ### LTnewLM_26 AUGUSTUS gene 264986 266191 1 - . ID=LTnewLM_260014300 LTnewLM_26 AUGUSTUS mRNA 264986 266191 1 - . ID=LTnewLM_260014300.1;Parent=LTnewLM_260014300 LTnewLM_26 AUGUSTUS CDS 264986 266191 1 - 0 ID=LTnewLM_260014300.1:CDS:1;Parent=LTnewLM_260014300.1 ### LTnewLM_26 . polypeptide 264986 266191 . - . ID=LTnewLM_260014300.1:pep;Derives_from=LTnewLM_260014300.1;orthologous_to=LmjF.26.0910_mRNA;ortholog_cluster=OG0003051;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 266958 267473 1 - . ID=LTnewLM_260014400 LTnewLM_26 AUGUSTUS mRNA 266958 267473 1 - . ID=LTnewLM_260014400.1;Parent=LTnewLM_260014400 LTnewLM_26 AUGUSTUS CDS 266958 267473 1 - 0 ID=LTnewLM_260014400.1:CDS:1;Parent=LTnewLM_260014400.1 ### LTnewLM_26 . polypeptide 266958 267473 . - . ID=LTnewLM_260014400.1:pep;Derives_from=LTnewLM_260014400.1;orthologous_to=LmjF.26.0920_mRNA;ortholog_cluster=OG0003052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 268597 270666 1 - . ID=LTnewLM_260014500 LTnewLM_26 AUGUSTUS mRNA 268597 270666 1 - . ID=LTnewLM_260014500.1;Parent=LTnewLM_260014500 LTnewLM_26 AUGUSTUS CDS 268597 270666 1 - 0 ID=LTnewLM_260014500.1:CDS:1;Parent=LTnewLM_260014500.1 ### LTnewLM_26 . polypeptide 268597 270666 . - . ID=LTnewLM_260014500.1:pep;Derives_from=LTnewLM_260014500.1;orthologous_to=LmjF.26.0930_mRNA;ortholog_cluster=OG0003053;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 272368 274899 1 - . ID=LTnewLM_260014600 LTnewLM_26 AUGUSTUS mRNA 272368 274899 1 - . ID=LTnewLM_260014600.1;Parent=LTnewLM_260014600 LTnewLM_26 AUGUSTUS CDS 272368 274899 1 - 0 ID=LTnewLM_260014600.1:CDS:1;Parent=LTnewLM_260014600.1 ### LTnewLM_26 . polypeptide 272368 274899 . - . ID=LTnewLM_260014600.1:pep;Derives_from=LTnewLM_260014600.1;orthologous_to=LmjF.26.0940_mRNA;ortholog_cluster=OG0003054;product=term%3DDnaJ domain/DnaJ-like protein C11%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF11875 LTnewLM_26 Pfam protein_match 272398 272994 . - . Parent=LTnewLM_260014600.1:pep;Name=PF11875;signature_desc=DnaJ-like protein C11%2C C-terminal LTnewLM_26 Pfam protein_match 274594 274791 . - . Parent=LTnewLM_260014600.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_26 AUGUSTUS gene 276725 278564 0.54 - . ID=LTnewLM_260014700 LTnewLM_26 AUGUSTUS mRNA 276725 278564 0.54 - . ID=LTnewLM_260014700.1;Parent=LTnewLM_260014700 LTnewLM_26 AUGUSTUS CDS 276725 276952 0.56 - 0 ID=LTnewLM_260014700.1:CDS:1;Parent=LTnewLM_260014700.1 LTnewLM_26 AUGUSTUS CDS 277026 278564 0.63 - 0 ID=LTnewLM_260014700.1:CDS:2;Parent=LTnewLM_260014700.1 ### LTnewLM_26 . polypeptide 276725 278564 . - . ID=LTnewLM_260014700.1:pep;Derives_from=LTnewLM_260014700.1;orthologous_to=LmjF.26.0950_mRNA;ortholog_cluster=OG0003055;product=term%3DMeiotic cell cortex C-terminal pleckstrin homology%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12814;Ontology_term=GO:0005543,GO:0005515,GO:0032065,GO:0005938 LTnewLM_26 Pfam protein_match 277023 277235 . - . Parent=LTnewLM_260014700.1:pep;Name=PF12814;signature_desc=Meiotic cell cortex C-terminal pleckstrin homology;Ontology_term=GO:0005515,GO:0005543,GO:0032065,GO:0005938 ### LTnewLM_26 . pseudogene 279385 285100 . - . ID=LTnewLM_260014800:pseudogene;coverage=0.996;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.0960_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 279385 285100 . - . ID=LTnewLM_260014800.1;Parent=LTnewLM_260014800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 279385 285100 . - . ID=LTnewLM_260014800.1:pseudogenic_exon:1;Parent=LTnewLM_260014800.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 279385 285100 . - . ID=LTnewLM_260014800.1:pep;Derives_from=LTnewLM_260014800.1;orthologous_to=LmjF.26.0960_mRNA;ortholog_cluster=OG0007547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 286261 287952 1 - . ID=LTnewLM_260014900 LTnewLM_26 AUGUSTUS mRNA 286261 287952 1 - . ID=LTnewLM_260014900.1;Parent=LTnewLM_260014900 LTnewLM_26 AUGUSTUS CDS 286261 287952 1 - 0 ID=LTnewLM_260014900.1:CDS:1;Parent=LTnewLM_260014900.1 ### LTnewLM_26 . polypeptide 286261 287952 . - . ID=LTnewLM_260014900.1:pep;Derives_from=LTnewLM_260014900.1;orthologous_to=LmjF.26.0970_mRNA;ortholog_cluster=OG0003056;product=term%3DNMD3 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04981 LTnewLM_26 Pfam protein_match 287179 287895 . - . Parent=LTnewLM_260014900.1:pep;Name=PF04981;signature_desc=NMD3 family ### LTnewLM_26 AUGUSTUS gene 291198 295388 1 - . ID=LTnewLM_260015000 LTnewLM_26 AUGUSTUS mRNA 291198 295388 1 - . ID=LTnewLM_260015000.1;Parent=LTnewLM_260015000 LTnewLM_26 AUGUSTUS CDS 291198 295388 1 - 0 ID=LTnewLM_260015000.1:CDS:1;Parent=LTnewLM_260015000.1 ### LTnewLM_26 . polypeptide 291198 295388 . - . ID=LTnewLM_260015000.1:pep;Derives_from=LTnewLM_260015000.1;orthologous_to=LmjF.26.0980_mRNA;ortholog_cluster=OG0003057;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_26 Pfam protein_match 291246 292508 . - . Parent=LTnewLM_260015000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 291903 292502 . - . Parent=LTnewLM_260015000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 299695 301467 1 - . ID=LTnewLM_260015100 LTnewLM_26 AUGUSTUS mRNA 299695 301467 1 - . ID=LTnewLM_260015100.1;Parent=LTnewLM_260015100 LTnewLM_26 AUGUSTUS CDS 299695 301467 1 - 0 ID=LTnewLM_260015100.1:CDS:1;Parent=LTnewLM_260015100.1 ### LTnewLM_26 . polypeptide 299695 301467 . - . ID=LTnewLM_260015100.1:pep;Derives_from=LTnewLM_260015100.1;orthologous_to=LmjF.26.0990_mRNA;ortholog_cluster=OG0003058;product=term%3DPolycystin cation channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08016 LTnewLM_26 Pfam protein_match 300046 300462 . - . Parent=LTnewLM_260015100.1:pep;Name=PF08016;signature_desc=Polycystin cation channel ### LTnewLM_26 AUGUSTUS gene 302242 303744 1 - . ID=LTnewLM_260015200 LTnewLM_26 AUGUSTUS mRNA 302242 303744 1 - . ID=LTnewLM_260015200.1;Parent=LTnewLM_260015200 LTnewLM_26 AUGUSTUS CDS 302242 303744 1 - 0 ID=LTnewLM_260015200.1:CDS:1;Parent=LTnewLM_260015200.1 ### LTnewLM_26 . polypeptide 302242 303744 . - . ID=LTnewLM_260015200.1:pep;Derives_from=LTnewLM_260015200.1;orthologous_to=LmjF.26.1000_mRNA;ortholog_cluster=OG0003059;product=term%3DGlucosidase II beta subunit-like/Glucosidase II beta subunit-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12999|Pfam:PF13015 LTnewLM_26 Pfam protein_match 302251 302610 . - . Parent=LTnewLM_260015200.1:pep;Name=PF13015;signature_desc=Glucosidase II beta subunit-like protein LTnewLM_26 Pfam protein_match 303193 303690 . - . Parent=LTnewLM_260015200.1:pep;Name=PF12999;signature_desc=Glucosidase II beta subunit-like ### LTnewLM_26 AUGUSTUS gene 305089 306321 1 - . ID=LTnewLM_260015300 LTnewLM_26 AUGUSTUS mRNA 305089 306321 1 - . ID=LTnewLM_260015300.1;Parent=LTnewLM_260015300 LTnewLM_26 AUGUSTUS CDS 305089 306321 1 - 0 ID=LTnewLM_260015300.1:CDS:1;Parent=LTnewLM_260015300.1 ### LTnewLM_26 . polypeptide 305089 306321 . - . ID=LTnewLM_260015300.1:pep;Derives_from=LTnewLM_260015300.1;orthologous_to=LmjF.26.1010_mRNA;ortholog_cluster=OG0003060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 306741 306938 . - . ID=LTnewLM_260015400;coverage=1.0;sequence_ID=0.914;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.1015_0 LTnewLM_26 Liftoff mRNA 306741 306938 . - . ID=LTnewLM_260015400.1;Parent=LTnewLM_260015400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 306741 306938 . - 0 ID=LTnewLM_260015400.1:CDS:1;Parent=LTnewLM_260015400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 306741 306938 . - . ID=LTnewLM_260015400.1:pep;Derives_from=LTnewLM_260015400.1;orthologous_to=LmjF.26.1015_mRNA;ortholog_cluster=OG0003061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 308190 320540 . + . ID=LTnewLM_260015500;coverage=0.999;sequence_ID=0.963;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.1020_0 LTnewLM_26 Liftoff mRNA 308190 320540 . + . ID=LTnewLM_260015500.1;Parent=LTnewLM_260015500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 308190 320540 . + 0 ID=LTnewLM_260015500.1:CDS:1;Parent=LTnewLM_260015500.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 308190 320540 . + . ID=LTnewLM_260015500.1:pep;Derives_from=LTnewLM_260015500.1;orthologous_to=LTnewLM_280036800.1,LmjF.26.1020_mRNA,LmjF.28.2880_mRNA;ortholog_cluster=OG0000185;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_26 Pfam protein_match 310590 311795 . + . Parent=LTnewLM_260015500.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_26 Pfam protein_match 312210 313187 . + . Parent=LTnewLM_260015500.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_26 Pfam protein_match 312321 312683 . + . Parent=LTnewLM_260015500.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_26 Pfam protein_match 313722 314309 . + . Parent=LTnewLM_260015500.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_26 Pfam protein_match 314334 314879 . + . Parent=LTnewLM_260015500.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_26 Pfam protein_match 314430 314864 . + . Parent=LTnewLM_260015500.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_26 Pfam protein_match 314985 315209 . + . Parent=LTnewLM_260015500.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_26 Pfam protein_match 315414 316184 . + . Parent=LTnewLM_260015500.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_26 Pfam protein_match 316224 317216 . + . Parent=LTnewLM_260015500.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_26 Pfam protein_match 317304 317966 . + . Parent=LTnewLM_260015500.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_26 Pfam protein_match 318705 319046 . + . Parent=LTnewLM_260015500.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_26 Pfam protein_match 319149 319574 . + . Parent=LTnewLM_260015500.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_26 Pfam protein_match 319602 320522 . + . Parent=LTnewLM_260015500.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_26 AUGUSTUS gene 322016 324349 0.63 + . ID=LTnewLM_260015600 LTnewLM_26 AUGUSTUS mRNA 322016 324349 0.63 + . ID=LTnewLM_260015600.1;Parent=LTnewLM_260015600 LTnewLM_26 AUGUSTUS CDS 322016 324280 1 + 0 ID=LTnewLM_260015600.1:CDS:1;Parent=LTnewLM_260015600.1 LTnewLM_26 AUGUSTUS CDS 324332 324349 0.63 + 0 ID=LTnewLM_260015600.1:CDS:2;Parent=LTnewLM_260015600.1 ### LTnewLM_26 . polypeptide 322016 324349 . + . ID=LTnewLM_260015600.1:pep;Derives_from=LTnewLM_260015600.1;orthologous_to=LmjF.26.1030_mRNA;ortholog_cluster=OG0003062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 325966 327615 1 + . ID=LTnewLM_260015700 LTnewLM_26 AUGUSTUS mRNA 325966 327615 1 + . ID=LTnewLM_260015700.1;Parent=LTnewLM_260015700 LTnewLM_26 AUGUSTUS CDS 325966 327615 1 + 0 ID=LTnewLM_260015700.1:CDS:1;Parent=LTnewLM_260015700.1 ### LTnewLM_26 . polypeptide 325966 327615 . + . ID=LTnewLM_260015700.1:pep;Derives_from=LTnewLM_260015700.1;orthologous_to=LmjF.26.1040_mRNA;ortholog_cluster=OG0003063;product=term%3DPeptidase family M28%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04389 LTnewLM_26 Pfam protein_match 326578 327087 . + . Parent=LTnewLM_260015700.1:pep;Name=PF04389;signature_desc=Peptidase family M28 ### LTnewLM_26 AUGUSTUS gene 329951 330478 1 + . ID=LTnewLM_260015800 LTnewLM_26 AUGUSTUS mRNA 329951 330478 1 + . ID=LTnewLM_260015800.1;Parent=LTnewLM_260015800 LTnewLM_26 AUGUSTUS CDS 329951 330478 1 + 0 ID=LTnewLM_260015800.1:CDS:1;Parent=LTnewLM_260015800.1 ### LTnewLM_26 . polypeptide 329951 330478 . + . ID=LTnewLM_260015800.1:pep;Derives_from=LTnewLM_260015800.1;orthologous_to=LmjF.26.1050_mRNA;ortholog_cluster=OG0003064;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111;Ontology_term=GO:0051536,GO:0009055 LTnewLM_26 Pfam protein_match 330149 330379 . + . Parent=LTnewLM_260015800.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_26 AUGUSTUS gene 331996 332982 1 + . ID=LTnewLM_260015900 LTnewLM_26 AUGUSTUS mRNA 331996 332982 1 + . ID=LTnewLM_260015900.1;Parent=LTnewLM_260015900 LTnewLM_26 AUGUSTUS CDS 331996 332982 1 + 0 ID=LTnewLM_260015900.1:CDS:1;Parent=LTnewLM_260015900.1 ### LTnewLM_26 . polypeptide 331996 332982 . + . ID=LTnewLM_260015900.1:pep;Derives_from=LTnewLM_260015900.1;orthologous_to=LmjF.26.1060_mRNA;ortholog_cluster=OG0003065;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_26 Pfam protein_match 332140 332304 . + . Parent=LTnewLM_260015900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_26 AUGUSTUS gene 333627 335315 1 + . ID=LTnewLM_260016000 LTnewLM_26 AUGUSTUS mRNA 333627 335315 1 + . ID=LTnewLM_260016000.1;Parent=LTnewLM_260016000 LTnewLM_26 AUGUSTUS CDS 333627 335315 1 + 0 ID=LTnewLM_260016000.1:CDS:1;Parent=LTnewLM_260016000.1 ### LTnewLM_26 . polypeptide 333627 335315 . + . ID=LTnewLM_260016000.1:pep;Derives_from=LTnewLM_260016000.1;orthologous_to=LmjF.26.1070_mRNA;ortholog_cluster=OG0003066;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 336184 342225 . + . ID=LTnewLM_260016100;coverage=1.0;sequence_ID=0.929;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.1080_0 LTnewLM_26 Liftoff mRNA 336184 342225 . + . ID=LTnewLM_260016100.1;Parent=LTnewLM_260016100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 336184 342225 . + 0 ID=LTnewLM_260016100.1:CDS:1;Parent=LTnewLM_260016100.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 336184 342225 . + . ID=LTnewLM_260016100.1:pep;Derives_from=LTnewLM_260016100.1;orthologous_to=LmjF.26.1080_mRNA;ortholog_cluster=OG0003067;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 342933 344432 . + . ID=LTnewLM_260016200;coverage=1.0;sequence_ID=0.935;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.1090_0 LTnewLM_26 Liftoff mRNA 342933 344432 . + . ID=LTnewLM_260016200.1;Parent=LTnewLM_260016200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 342933 344432 . + 0 ID=LTnewLM_260016200.1:CDS:1;Parent=LTnewLM_260016200.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 342933 344432 . + . ID=LTnewLM_260016200.1:pep;Derives_from=LTnewLM_260016200.1;orthologous_to=LmjF.26.1090_mRNA;ortholog_cluster=OG0003068;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 345196 345576 1 + . ID=LTnewLM_260016300 LTnewLM_26 AUGUSTUS mRNA 345196 345576 1 + . ID=LTnewLM_260016300.1;Parent=LTnewLM_260016300 LTnewLM_26 AUGUSTUS CDS 345196 345576 1 + 0 ID=LTnewLM_260016300.1:CDS:1;Parent=LTnewLM_260016300.1 ### LTnewLM_26 . polypeptide 345196 345576 . + . ID=LTnewLM_260016300.1:pep;Derives_from=LTnewLM_260016300.1;orthologous_to=LmjF.26.1100_mRNA;ortholog_cluster=OG0003069;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 348210 360771 . + . ID=LTnewLM_260016400:pseudogene;coverage=0.998;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1110_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 348210 360771 . + . ID=LTnewLM_260016400.1;Parent=LTnewLM_260016400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 348210 360771 . + . ID=LTnewLM_260016400.1:pseudogenic_exon:1;Parent=LTnewLM_260016400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 348210 360771 . + . ID=LTnewLM_260016400.1:pep;Derives_from=LTnewLM_260016400.1;orthologous_to=LmjF.26.1110_mRNA;ortholog_cluster=OG0007548;product=term%3DTROVE domain/Domain of unknown function (DUF4062)/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05731|Pfam:PF13271|Pfam:PF00400;Ontology_term=GO:0003723,GO:0005515 LTnewLM_26 Pfam protein_match 348405 349277 . + . Parent=LTnewLM_260016400.1:pep;Name=PF05731;signature_desc=TROVE domain;Ontology_term=GO:0003723 LTnewLM_26 Pfam protein_match 349470 350057 . + . Parent=LTnewLM_260016400.1:pep;Name=PF05731;signature_desc=TROVE domain;Ontology_term=GO:0003723 LTnewLM_26 Pfam protein_match 351978 352337 . + . Parent=LTnewLM_260016400.1:pep;Name=PF13271;signature_desc=Domain of unknown function (DUF4062) LTnewLM_26 Pfam protein_match 356190 356288 . + . Parent=LTnewLM_260016400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 356943 357026 . + . Parent=LTnewLM_260016400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 361691 363091 1 + . ID=LTnewLM_260016500 LTnewLM_26 AUGUSTUS mRNA 361691 363091 1 + . ID=LTnewLM_260016500.1;Parent=LTnewLM_260016500 LTnewLM_26 AUGUSTUS CDS 361691 363091 1 + 0 ID=LTnewLM_260016500.1:CDS:1;Parent=LTnewLM_260016500.1 ### LTnewLM_26 . polypeptide 361691 363091 . + . ID=LTnewLM_260016500.1:pep;Derives_from=LTnewLM_260016500.1;orthologous_to=LmjF.26.1120_mRNA;ortholog_cluster=OG0003070;product=term%3DAxonemal dynein light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10211 LTnewLM_26 Pfam protein_match 362546 363049 . + . Parent=LTnewLM_260016500.1:pep;Name=PF10211;signature_desc=Axonemal dynein light chain ### LTnewLM_26 AUGUSTUS gene 364746 369932 1 + . ID=LTnewLM_260016600 LTnewLM_26 AUGUSTUS mRNA 364746 369932 1 + . ID=LTnewLM_260016600.1;Parent=LTnewLM_260016600 LTnewLM_26 AUGUSTUS CDS 364746 369932 1 + 0 ID=LTnewLM_260016600.1:CDS:1;Parent=LTnewLM_260016600.1 ### LTnewLM_26 . polypeptide 364746 369932 . + . ID=LTnewLM_260016600.1:pep;Derives_from=LTnewLM_260016600.1;orthologous_to=LmjF.26.1130_mRNA;ortholog_cluster=OG0003071;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 372301 373920 1 + . ID=LTnewLM_260016700 LTnewLM_26 AUGUSTUS mRNA 372301 373920 1 + . ID=LTnewLM_260016700.1;Parent=LTnewLM_260016700 LTnewLM_26 AUGUSTUS CDS 372301 373920 1 + 0 ID=LTnewLM_260016700.1:CDS:1;Parent=LTnewLM_260016700.1 ### LTnewLM_26 . polypeptide 372301 373920 . + . ID=LTnewLM_260016700.1:pep;Derives_from=LTnewLM_260016700.1;orthologous_to=LmjF.26.1140_mRNA;ortholog_cluster=OG0003072;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 375020 377404 1 + . ID=LTnewLM_260016800 LTnewLM_26 AUGUSTUS mRNA 375020 377404 1 + . ID=LTnewLM_260016800.1;Parent=LTnewLM_260016800 LTnewLM_26 AUGUSTUS CDS 375020 377404 1 + 0 ID=LTnewLM_260016800.1:CDS:1;Parent=LTnewLM_260016800.1 ### LTnewLM_26 . polypeptide 375020 377404 . + . ID=LTnewLM_260016800.1:pep;Derives_from=LTnewLM_260016800.1;orthologous_to=LmjF.26.1150_mRNA;ortholog_cluster=OG0003073;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 378099 381029 1 + . ID=LTnewLM_260016900 LTnewLM_26 AUGUSTUS mRNA 378099 381029 1 + . ID=LTnewLM_260016900.1;Parent=LTnewLM_260016900 LTnewLM_26 AUGUSTUS CDS 378099 381029 1 + 0 ID=LTnewLM_260016900.1:CDS:1;Parent=LTnewLM_260016900.1 ### LTnewLM_26 . polypeptide 378099 381029 . + . ID=LTnewLM_260016900.1:pep;Derives_from=LTnewLM_260016900.1;orthologous_to=LmjF.26.1160_mRNA;ortholog_cluster=OG0003074;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_26 Pfam protein_match 378810 379277 . + . Parent=LTnewLM_260016900.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_26 AUGUSTUS gene 381764 383347 1 + . ID=LTnewLM_260017000 LTnewLM_26 AUGUSTUS mRNA 381764 383347 1 + . ID=LTnewLM_260017000.1;Parent=LTnewLM_260017000 LTnewLM_26 AUGUSTUS CDS 381764 383347 1 + 0 ID=LTnewLM_260017000.1:CDS:1;Parent=LTnewLM_260017000.1 ### LTnewLM_26 . polypeptide 381764 383347 . + . ID=LTnewLM_260017000.1:pep;Derives_from=LTnewLM_260017000.1;orthologous_to=LmjF.26.1170_mRNA;ortholog_cluster=OG0003075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 384161 386212 1 + . ID=LTnewLM_260017100 LTnewLM_26 AUGUSTUS mRNA 384161 386212 1 + . ID=LTnewLM_260017100.1;Parent=LTnewLM_260017100 LTnewLM_26 AUGUSTUS CDS 384161 386212 1 + 0 ID=LTnewLM_260017100.1:CDS:1;Parent=LTnewLM_260017100.1 ### LTnewLM_26 . polypeptide 384161 386212 . + . ID=LTnewLM_260017100.1:pep;Derives_from=LTnewLM_260017100.1;orthologous_to=LmjF.26.1180_mRNA;ortholog_cluster=OG0003076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 387855 393116 1 + . ID=LTnewLM_260017200 LTnewLM_26 AUGUSTUS mRNA 387855 393116 1 + . ID=LTnewLM_260017200.1;Parent=LTnewLM_260017200 LTnewLM_26 AUGUSTUS CDS 387855 393116 1 + 0 ID=LTnewLM_260017200.1:CDS:1;Parent=LTnewLM_260017200.1 ### LTnewLM_26 . polypeptide 387855 393116 . + . ID=LTnewLM_260017200.1:pep;Derives_from=LTnewLM_260017200.1;orthologous_to=LmjF.26.1190_mRNA;ortholog_cluster=OG0003077;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 393925 395883 1 + . ID=LTnewLM_260017300 LTnewLM_26 AUGUSTUS mRNA 393925 395883 1 + . ID=LTnewLM_260017300.1;Parent=LTnewLM_260017300 LTnewLM_26 AUGUSTUS CDS 393925 395883 1 + 0 ID=LTnewLM_260017300.1:CDS:1;Parent=LTnewLM_260017300.1 ### LTnewLM_26 . polypeptide 393925 395883 . + . ID=LTnewLM_260017300.1:pep;Derives_from=LTnewLM_260017300.1;orthologous_to=LmjF.26.1200_mRNA;ortholog_cluster=OG0003078;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_26 Pfam protein_match 394768 394950 . + . Parent=LTnewLM_260017300.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_26 . pseudogene 396743 397991 . + . ID=LTnewLM_260017400:pseudogene;coverage=1.0;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1210_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 396743 397991 . + . ID=LTnewLM_260017400.1;Parent=LTnewLM_260017400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 396743 397991 . + . ID=LTnewLM_260017400.1:pseudogenic_exon:1;Parent=LTnewLM_260017400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 396743 397991 . + . ID=LTnewLM_260017400.1:pep;Derives_from=LTnewLM_260017400.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 398660 400666 1 + . ID=LTnewLM_260017500 LTnewLM_26 AUGUSTUS mRNA 398660 400666 1 + . ID=LTnewLM_260017500.1;Parent=LTnewLM_260017500 LTnewLM_26 AUGUSTUS CDS 398660 400666 1 + 0 ID=LTnewLM_260017500.1:CDS:1;Parent=LTnewLM_260017500.1 ### LTnewLM_26 . polypeptide 398660 400666 . + . ID=LTnewLM_260017500.1:pep;Derives_from=LTnewLM_260017500.1;orthologous_to=LmjF.26.1220_mRNA;ortholog_cluster=OG0003079;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 402171 411633 . + . ID=LTnewLM_260017600:pseudogene;coverage=0.991;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1230_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 402171 411633 . + . ID=LTnewLM_260017600.1;Parent=LTnewLM_260017600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 402171 411633 . + . ID=LTnewLM_260017600.1:pseudogenic_exon:1;Parent=LTnewLM_260017600.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 402171 411633 . + . ID=LTnewLM_260017600.1:pep;Derives_from=LTnewLM_260017600.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 412418 414343 1 + . ID=LTnewLM_260017700 LTnewLM_26 AUGUSTUS mRNA 412418 414343 1 + . ID=LTnewLM_260017700.1;Parent=LTnewLM_260017700 LTnewLM_26 AUGUSTUS CDS 412418 414343 1 + 0 ID=LTnewLM_260017700.1:CDS:1;Parent=LTnewLM_260017700.1 ### LTnewLM_26 . polypeptide 412418 414343 . + . ID=LTnewLM_260017700.1:pep;Derives_from=LTnewLM_260017700.1;orthologous_to=LmjF.26.1240_mRNA;ortholog_cluster=OG0003080;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_26 Pfam protein_match 412433 414250 . + . Parent=LTnewLM_260017700.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_26 Pfam protein_match 412787 413539 . + . Parent=LTnewLM_260017700.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_26 AUGUSTUS gene 416812 418908 1 + . ID=LTnewLM_260017800 LTnewLM_26 AUGUSTUS mRNA 416812 418908 1 + . ID=LTnewLM_260017800.1;Parent=LTnewLM_260017800 LTnewLM_26 AUGUSTUS CDS 416812 418908 1 + 0 ID=LTnewLM_260017800.1:CDS:1;Parent=LTnewLM_260017800.1 ### LTnewLM_26 . polypeptide 416812 418908 . + . ID=LTnewLM_260017800.1:pep;Derives_from=LTnewLM_260017800.1;orthologous_to=LmjF.26.1250_mRNA;ortholog_cluster=OG0003081;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 424505 429454 1 + . ID=LTnewLM_260017900 LTnewLM_26 AUGUSTUS mRNA 424505 429454 1 + . ID=LTnewLM_260017900.1;Parent=LTnewLM_260017900 LTnewLM_26 AUGUSTUS CDS 424505 429454 1 + 0 ID=LTnewLM_260017900.1:CDS:1;Parent=LTnewLM_260017900.1 ### LTnewLM_26 . polypeptide 424505 429454 . + . ID=LTnewLM_260017900.1:pep;Derives_from=LTnewLM_260017900.1;orthologous_to=LmjF.26.1260_mRNA;ortholog_cluster=OG0003082;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 424523 424648 . + . Parent=LTnewLM_260017900.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_26 AUGUSTUS gene 430321 433017 1 + . ID=LTnewLM_260018000 LTnewLM_26 AUGUSTUS mRNA 430321 433017 1 + . ID=LTnewLM_260018000.1;Parent=LTnewLM_260018000 LTnewLM_26 AUGUSTUS CDS 430321 433017 1 + 0 ID=LTnewLM_260018000.1:CDS:1;Parent=LTnewLM_260018000.1 ### LTnewLM_26 . polypeptide 430321 433017 . + . ID=LTnewLM_260018000.1:pep;Derives_from=LTnewLM_260018000.1;orthologous_to=LmjF.26.1270_mRNA;ortholog_cluster=OG0003083;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_26 Pfam protein_match 431650 431871 . + . Parent=LTnewLM_260018000.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_26 AUGUSTUS gene 434999 438289 1 + . ID=LTnewLM_260018100 LTnewLM_26 AUGUSTUS mRNA 434999 438289 1 + . ID=LTnewLM_260018100.1;Parent=LTnewLM_260018100 LTnewLM_26 AUGUSTUS CDS 434999 438289 1 + 0 ID=LTnewLM_260018100.1:CDS:1;Parent=LTnewLM_260018100.1 ### LTnewLM_26 . polypeptide 434999 438289 . + . ID=LTnewLM_260018100.1:pep;Derives_from=LTnewLM_260018100.1;orthologous_to=LmjF.26.1280_mRNA;ortholog_cluster=OG0003084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 438968 440740 1 + . ID=LTnewLM_260018200 LTnewLM_26 AUGUSTUS mRNA 438968 440740 1 + . ID=LTnewLM_260018200.1;Parent=LTnewLM_260018200 LTnewLM_26 AUGUSTUS CDS 438968 440740 1 + 0 ID=LTnewLM_260018200.1:CDS:1;Parent=LTnewLM_260018200.1 ### LTnewLM_26 . polypeptide 438968 440740 . + . ID=LTnewLM_260018200.1:pep;Derives_from=LTnewLM_260018200.1;orthologous_to=LmjF.26.1290_mRNA;ortholog_cluster=OG0003085;product=term%3DCupin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13621 LTnewLM_26 Pfam protein_match 439289 440695 . + . Parent=LTnewLM_260018200.1:pep;Name=PF13621;signature_desc=Cupin-like domain ### LTnewLM_26 AUGUSTUS gene 441505 445074 1 + . ID=LTnewLM_260018300 LTnewLM_26 AUGUSTUS mRNA 441505 445074 1 + . ID=LTnewLM_260018300.1;Parent=LTnewLM_260018300 LTnewLM_26 AUGUSTUS CDS 441505 445074 1 + 0 ID=LTnewLM_260018300.1:CDS:1;Parent=LTnewLM_260018300.1 ### LTnewLM_26 . polypeptide 441505 445074 . + . ID=LTnewLM_260018300.1:pep;Derives_from=LTnewLM_260018300.1;orthologous_to=LmjF.26.1300_mRNA;ortholog_cluster=OG0003086;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 446792 447820 1 + . ID=LTnewLM_260018400 LTnewLM_26 AUGUSTUS mRNA 446792 447820 1 + . ID=LTnewLM_260018400.1;Parent=LTnewLM_260018400 LTnewLM_26 AUGUSTUS CDS 446792 447820 1 + 0 ID=LTnewLM_260018400.1:CDS:1;Parent=LTnewLM_260018400.1 ### LTnewLM_26 . polypeptide 446792 447820 . + . ID=LTnewLM_260018400.1:pep;Derives_from=LTnewLM_260018400.1;orthologous_to=LmjF.26.1310_mRNA;ortholog_cluster=OG0003087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 449360 450196 1 + . ID=LTnewLM_260018500 LTnewLM_26 AUGUSTUS mRNA 449360 450196 1 + . ID=LTnewLM_260018500.1;Parent=LTnewLM_260018500 LTnewLM_26 AUGUSTUS CDS 449360 450196 1 + 0 ID=LTnewLM_260018500.1:CDS:1;Parent=LTnewLM_260018500.1 ### LTnewLM_26 . polypeptide 449360 450196 . + . ID=LTnewLM_260018500.1:pep;Derives_from=LTnewLM_260018500.1;orthologous_to=LmjF.26.1320_mRNA;ortholog_cluster=OG0003088;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 451155 452381 1 + . ID=LTnewLM_260018600 LTnewLM_26 AUGUSTUS mRNA 451155 452381 1 + . ID=LTnewLM_260018600.1;Parent=LTnewLM_260018600 LTnewLM_26 AUGUSTUS CDS 451155 452381 1 + 0 ID=LTnewLM_260018600.1:CDS:1;Parent=LTnewLM_260018600.1 ### LTnewLM_26 . polypeptide 451155 452381 . + . ID=LTnewLM_260018600.1:pep;Derives_from=LTnewLM_260018600.1;orthologous_to=LmjF.26.1330_mRNA;ortholog_cluster=OG0003089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 454005 455897 1 + . ID=LTnewLM_260018700 LTnewLM_26 AUGUSTUS mRNA 454005 455897 1 + . ID=LTnewLM_260018700.1;Parent=LTnewLM_260018700 LTnewLM_26 AUGUSTUS CDS 454005 455897 1 + 0 ID=LTnewLM_260018700.1:CDS:1;Parent=LTnewLM_260018700.1 ### LTnewLM_26 . polypeptide 454005 455897 . + . ID=LTnewLM_260018700.1:pep;Derives_from=LTnewLM_260018700.1;orthologous_to=LmjF.26.1340_mRNA;ortholog_cluster=OG0003090;product=term%3DProbable Zinc-ribbon domain/DNA ligase OB-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311|Pfam:PF14743 LTnewLM_26 Pfam protein_match 454203 454370 . + . Parent=LTnewLM_260018700.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_26 Pfam protein_match 455649 455864 . + . Parent=LTnewLM_260018700.1:pep;Name=PF14743;signature_desc=DNA ligase OB-like domain ### LTnewLM_26 AUGUSTUS gene 457905 459389 1 + . ID=LTnewLM_260018800 LTnewLM_26 AUGUSTUS mRNA 457905 459389 1 + . ID=LTnewLM_260018800.1;Parent=LTnewLM_260018800 LTnewLM_26 AUGUSTUS CDS 457905 459389 1 + 0 ID=LTnewLM_260018800.1:CDS:1;Parent=LTnewLM_260018800.1 ### LTnewLM_26 . polypeptide 457905 459389 . + . ID=LTnewLM_260018800.1:pep;Derives_from=LTnewLM_260018800.1;orthologous_to=LmjF.26.1350_mRNA;ortholog_cluster=OG0003091;product=term%3DATP dependent DNA ligase domain/DNA ligase OB-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01068|Pfam:PF14743;Ontology_term=GO:0006310,GO:0006281,GO:0003910,GO:0005524 LTnewLM_26 Pfam protein_match 458376 459104 . + . Parent=LTnewLM_260018800.1:pep;Name=PF01068;signature_desc=ATP dependent DNA ligase domain;Ontology_term=GO:0003910,GO:0005524,GO:0006281,GO:0006310 LTnewLM_26 Pfam protein_match 459147 459356 . + . Parent=LTnewLM_260018800.1:pep;Name=PF14743;signature_desc=DNA ligase OB-like domain ### LTnewLM_26 AUGUSTUS gene 460388 462205 1 + . ID=LTnewLM_260018900 LTnewLM_26 AUGUSTUS mRNA 460388 462205 1 + . ID=LTnewLM_260018900.1;Parent=LTnewLM_260018900 LTnewLM_26 AUGUSTUS CDS 460388 462205 1 + 0 ID=LTnewLM_260018900.1:CDS:1;Parent=LTnewLM_260018900.1 ### LTnewLM_26 . polypeptide 460388 462205 . + . ID=LTnewLM_260018900.1:pep;Derives_from=LTnewLM_260018900.1;orthologous_to=LmjF.26.1360_mRNA;ortholog_cluster=OG0003092;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 463258 465975 1 + . ID=LTnewLM_260019000 LTnewLM_26 AUGUSTUS mRNA 463258 465975 1 + . ID=LTnewLM_260019000.1;Parent=LTnewLM_260019000 LTnewLM_26 AUGUSTUS CDS 463258 465975 1 + 0 ID=LTnewLM_260019000.1:CDS:1;Parent=LTnewLM_260019000.1 ### LTnewLM_26 . polypeptide 463258 465975 . + . ID=LTnewLM_260019000.1:pep;Derives_from=LTnewLM_260019000.1;orthologous_to=LmjF.26.1370_mRNA;ortholog_cluster=OG0003093;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_26 Pfam protein_match 465400 465573 . + . Parent=LTnewLM_260019000.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_26 AUGUSTUS gene 466839 467423 1 + . ID=LTnewLM_260019100 LTnewLM_26 AUGUSTUS mRNA 466839 467423 1 + . ID=LTnewLM_260019100.1;Parent=LTnewLM_260019100 LTnewLM_26 AUGUSTUS CDS 466839 467423 1 + 0 ID=LTnewLM_260019100.1:CDS:1;Parent=LTnewLM_260019100.1 ### LTnewLM_26 . polypeptide 466839 467423 . + . ID=LTnewLM_260019100.1:pep;Derives_from=LTnewLM_260019100.1;orthologous_to=LmjF.26.1380_mRNA;ortholog_cluster=OG0003094;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02996 LTnewLM_26 Pfam protein_match 467004 467369 . + . Parent=LTnewLM_260019100.1:pep;Name=PF02996;signature_desc=Prefoldin subunit ### LTnewLM_26 AUGUSTUS gene 468733 472077 1 + . ID=LTnewLM_260019200 LTnewLM_26 AUGUSTUS mRNA 468733 472077 1 + . ID=LTnewLM_260019200.1;Parent=LTnewLM_260019200 LTnewLM_26 AUGUSTUS CDS 468733 472077 1 + 0 ID=LTnewLM_260019200.1:CDS:1;Parent=LTnewLM_260019200.1 ### LTnewLM_26 . polypeptide 468733 472077 . + . ID=LTnewLM_260019200.1:pep;Derives_from=LTnewLM_260019200.1;orthologous_to=LmjF.26.1390_mRNA;ortholog_cluster=OG0003095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 474196 475941 1 + . ID=LTnewLM_260019300 LTnewLM_26 AUGUSTUS mRNA 474196 475941 1 + . ID=LTnewLM_260019300.1;Parent=LTnewLM_260019300 LTnewLM_26 AUGUSTUS CDS 474196 475941 1 + 0 ID=LTnewLM_260019300.1:CDS:1;Parent=LTnewLM_260019300.1 ### LTnewLM_26 . polypeptide 474196 475941 . + . ID=LTnewLM_260019300.1:pep;Derives_from=LTnewLM_260019300.1;orthologous_to=LmjF.26.1400_mRNA;ortholog_cluster=OG0003096;product=term%3DWWE domain/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02825|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 474541 474768 . + . Parent=LTnewLM_260019300.1:pep;Name=PF02825;signature_desc=WWE domain LTnewLM_26 Pfam protein_match 475300 475401 . + . Parent=LTnewLM_260019300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 475561 475659 . + . Parent=LTnewLM_260019300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 477711 479321 1 + . ID=LTnewLM_260019400 LTnewLM_26 AUGUSTUS mRNA 477711 479321 1 + . ID=LTnewLM_260019400.1;Parent=LTnewLM_260019400 LTnewLM_26 AUGUSTUS CDS 477711 479321 1 + 0 ID=LTnewLM_260019400.1:CDS:1;Parent=LTnewLM_260019400.1 ### LTnewLM_26 . polypeptide 477711 479321 . + . ID=LTnewLM_260019400.1:pep;Derives_from=LTnewLM_260019400.1;orthologous_to=LmjF.26.1410_mRNA;ortholog_cluster=OG0003097;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_26 Pfam protein_match 478923 479120 . + . Parent=LTnewLM_260019400.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_26 AUGUSTUS gene 481971 489233 1 + . ID=LTnewLM_260019500 LTnewLM_26 AUGUSTUS mRNA 481971 489233 1 + . ID=LTnewLM_260019500.1;Parent=LTnewLM_260019500 LTnewLM_26 AUGUSTUS CDS 481971 489233 1 + 0 ID=LTnewLM_260019500.1:CDS:1;Parent=LTnewLM_260019500.1 ### LTnewLM_26 . polypeptide 481971 489233 . + . ID=LTnewLM_260019500.1:pep;Derives_from=LTnewLM_260019500.1;orthologous_to=LmjF.26.1420_mRNA;ortholog_cluster=OG0003098;product=term%3DMORN repeat/FYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493|Pfam:PF01363;Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 482388 482429 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482448 482498 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482646 482714 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482718 482777 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482787 482849 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482856 482918 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482928 482990 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 482994 483041 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 483072 483107 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 483420 483482 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 483561 483620 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 483669 483719 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 483960 484007 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 485520 485858 . + . Parent=LTnewLM_260019500.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 486579 486638 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 486648 486713 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 486843 486905 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 486915 486974 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 486981 487025 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_26 Pfam protein_match 487176 487424 . + . Parent=LTnewLM_260019500.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 487473 487532 . + . Parent=LTnewLM_260019500.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_26 AUGUSTUS gene 492161 495607 1 + . ID=LTnewLM_260019600 LTnewLM_26 AUGUSTUS mRNA 492161 495607 1 + . ID=LTnewLM_260019600.1;Parent=LTnewLM_260019600 LTnewLM_26 AUGUSTUS CDS 492161 495607 1 + 0 ID=LTnewLM_260019600.1:CDS:1;Parent=LTnewLM_260019600.1 ### LTnewLM_26 . polypeptide 492161 495607 . + . ID=LTnewLM_260019600.1:pep;Derives_from=LTnewLM_260019600.1;orthologous_to=LmjF.26.1430_mRNA;ortholog_cluster=OG0003099;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_26 Pfam protein_match 495371 495586 . + . Parent=LTnewLM_260019600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_26 . pseudogene 498162 500713 . + . ID=LTnewLM_260019700:pseudogene;coverage=0.985;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1440_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 498162 500713 . + . ID=LTnewLM_260019700.1;Parent=LTnewLM_260019700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 498162 500713 . + . ID=LTnewLM_260019700.1:pseudogenic_exon:1;Parent=LTnewLM_260019700.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 498162 500713 . + . ID=LTnewLM_260019700.1:pep;Derives_from=LTnewLM_260019700.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 505825 509949 1 + . ID=LTnewLM_260019800 LTnewLM_26 AUGUSTUS mRNA 505825 509949 1 + . ID=LTnewLM_260019800.1;Parent=LTnewLM_260019800 LTnewLM_26 AUGUSTUS CDS 505825 509949 1 + 0 ID=LTnewLM_260019800.1:CDS:1;Parent=LTnewLM_260019800.1 ### LTnewLM_26 . polypeptide 505825 509949 . + . ID=LTnewLM_260019800.1:pep;Derives_from=LTnewLM_260019800.1;orthologous_to=LmjF.26.1450_mRNA;ortholog_cluster=OG0003100;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 514258 515274 1 + . ID=LTnewLM_260019900 LTnewLM_26 AUGUSTUS mRNA 514258 515274 1 + . ID=LTnewLM_260019900.1;Parent=LTnewLM_260019900 LTnewLM_26 AUGUSTUS CDS 514258 515274 1 + 0 ID=LTnewLM_260019900.1:CDS:1;Parent=LTnewLM_260019900.1 ### LTnewLM_26 . polypeptide 514258 515274 . + . ID=LTnewLM_260019900.1:pep;Derives_from=LTnewLM_260019900.1;orthologous_to=LmjF.26.1460_mRNA;ortholog_cluster=OG0003101;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 517083 519222 . + . ID=LTnewLM_260020000:pseudogene;coverage=0.982;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1470_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 517083 519222 . + . ID=LTnewLM_260020000.1;Parent=LTnewLM_260020000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 517083 519222 . + . ID=LTnewLM_260020000.1:pseudogenic_exon:1;Parent=LTnewLM_260020000.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 517083 519222 . + . ID=LTnewLM_260020000.1:pep;Derives_from=LTnewLM_260020000.1;orthologous_to=LmjF.26.1470_mRNA;ortholog_cluster=OG0007549;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 520144 523203 1 + . ID=LTnewLM_260020100 LTnewLM_26 AUGUSTUS mRNA 520144 523203 1 + . ID=LTnewLM_260020100.1;Parent=LTnewLM_260020100 LTnewLM_26 AUGUSTUS CDS 520144 523203 1 + 0 ID=LTnewLM_260020100.1:CDS:1;Parent=LTnewLM_260020100.1 ### LTnewLM_26 . polypeptide 520144 523203 . + . ID=LTnewLM_260020100.1:pep;Derives_from=LTnewLM_260020100.1;orthologous_to=LmjF.26.1480_mRNA;ortholog_cluster=OG0003102;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 524853 526820 1 + . ID=LTnewLM_260020200 LTnewLM_26 AUGUSTUS mRNA 524853 526820 1 + . ID=LTnewLM_260020200.1;Parent=LTnewLM_260020200 LTnewLM_26 AUGUSTUS CDS 524853 526820 1 + 0 ID=LTnewLM_260020200.1:CDS:1;Parent=LTnewLM_260020200.1 ### LTnewLM_26 . polypeptide 524853 526820 . + . ID=LTnewLM_260020200.1:pep;Derives_from=LTnewLM_260020200.1;orthologous_to=LmjF.26.1490_mRNA;ortholog_cluster=OG0003103;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 528808 529107 1 + . ID=LTnewLM_260020300 LTnewLM_26 AUGUSTUS mRNA 528808 529107 1 + . ID=LTnewLM_260020300.1;Parent=LTnewLM_260020300 LTnewLM_26 AUGUSTUS CDS 528808 529107 1 + 0 ID=LTnewLM_260020300.1:CDS:1;Parent=LTnewLM_260020300.1 ### LTnewLM_26 . polypeptide 528808 529107 . + . ID=LTnewLM_260020300.1:pep;Derives_from=LTnewLM_260020300.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 531866 532276 1 + . ID=LTnewLM_260020400 LTnewLM_26 AUGUSTUS mRNA 531866 532276 1 + . ID=LTnewLM_260020400.1;Parent=LTnewLM_260020400 LTnewLM_26 AUGUSTUS CDS 531866 532276 1 + 0 ID=LTnewLM_260020400.1:CDS:1;Parent=LTnewLM_260020400.1 ### LTnewLM_26 . polypeptide 531866 532276 . + . ID=LTnewLM_260020400.1:pep;Derives_from=LTnewLM_260020400.1;orthologous_to=LmjF.26.1500_mRNA;ortholog_cluster=OG0003104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 538000 542703 1.63 + . ID=LTnewLM_260020500 LTnewLM_26 AUGUSTUS mRNA 538000 542703 1 + . ID=LTnewLM_260020500.1;Parent=LTnewLM_260020500 LTnewLM_26 AUGUSTUS CDS 538000 542703 1 + 0 ID=LTnewLM_260020500.1:CDS:1;Parent=LTnewLM_260020500.1 LTnewLM_26 AUGUSTUS mRNA 539512 542703 0.63 + . ID=LTnewLM_260020500.2;Parent=LTnewLM_260020500 LTnewLM_26 AUGUSTUS CDS 539512 542703 0.63 + 0 ID=LTnewLM_260020500.2:CDS:1;Parent=LTnewLM_260020500.2 ### LTnewLM_26 . polypeptide 538000 542703 . + . ID=LTnewLM_260020500.1:pep;Derives_from=LTnewLM_260020500.1;orthologous_to=LTnewLM_260020500.2,LmjF.26.1510_mRNA;ortholog_cluster=OG0000403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . polypeptide 539512 542703 . + . ID=LTnewLM_260020500.2:pep;Derives_from=LTnewLM_260020500.2;orthologous_to=LTnewLM_260020500.1,LmjF.26.1510_mRNA;ortholog_cluster=OG0000403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 544921 546126 1 + . ID=LTnewLM_260020600 LTnewLM_26 AUGUSTUS mRNA 544921 546126 1 + . ID=LTnewLM_260020600.1;Parent=LTnewLM_260020600 LTnewLM_26 AUGUSTUS CDS 544921 546126 1 + 0 ID=LTnewLM_260020600.1:CDS:1;Parent=LTnewLM_260020600.1 ### LTnewLM_26 . polypeptide 544921 546126 . + . ID=LTnewLM_260020600.1:pep;Derives_from=LTnewLM_260020600.1;orthologous_to=LmjF.26.1520_mRNA;ortholog_cluster=OG0003105;product=term%3DAlpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12697 LTnewLM_26 Pfam protein_match 545005 546075 . + . Parent=LTnewLM_260020600.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_26 AUGUSTUS gene 546905 547570 1 + . ID=LTnewLM_260020700 LTnewLM_26 AUGUSTUS mRNA 546905 547570 1 + . ID=LTnewLM_260020700.1;Parent=LTnewLM_260020700 LTnewLM_26 AUGUSTUS CDS 546905 547570 1 + 0 ID=LTnewLM_260020700.1:CDS:1;Parent=LTnewLM_260020700.1 ### LTnewLM_26 . polypeptide 546905 547570 . + . ID=LTnewLM_260020700.1:pep;Derives_from=LTnewLM_260020700.1;orthologous_to=LmjF.26.1530_mRNA;ortholog_cluster=OG0003106;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_26 Pfam protein_match 547220 547417 . + . Parent=LTnewLM_260020700.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_26 AUGUSTUS gene 549194 550387 1 + . ID=LTnewLM_260020800 LTnewLM_26 AUGUSTUS mRNA 549194 550387 1 + . ID=LTnewLM_260020800.1;Parent=LTnewLM_260020800 LTnewLM_26 AUGUSTUS CDS 549194 550387 1 + 0 ID=LTnewLM_260020800.1:CDS:1;Parent=LTnewLM_260020800.1 ### LTnewLM_26 . polypeptide 549194 550387 . + . ID=LTnewLM_260020800.1:pep;Derives_from=LTnewLM_260020800.1;orthologous_to=LmjF.26.1540_mRNA;ortholog_cluster=OG0003107;product=term%3DGlutaredoxin/Glutathione S-transferase%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462|Pfam:PF13417;Ontology_term=GO:0005515,GO:0009055,GO:0045454,GO:0015035 LTnewLM_26 Pfam protein_match 549536 549622 . + . Parent=LTnewLM_260020800.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 LTnewLM_26 Pfam protein_match 549536 549772 . + . Parent=LTnewLM_260020800.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 551609 554050 1 + . ID=LTnewLM_260020900 LTnewLM_26 AUGUSTUS mRNA 551609 554050 1 + . ID=LTnewLM_260020900.1;Parent=LTnewLM_260020900 LTnewLM_26 AUGUSTUS CDS 551609 554050 1 + 0 ID=LTnewLM_260020900.1:CDS:1;Parent=LTnewLM_260020900.1 ### LTnewLM_26 . polypeptide 551609 554050 . + . ID=LTnewLM_260020900.1:pep;Derives_from=LTnewLM_260020900.1;orthologous_to=LmjF.26.1550_mRNA;ortholog_cluster=OG0003108;product=term%3DEnoyl-CoA hydratase/isomerase/NAD binding domain of 6-phosphogluconate dehydrogenase/3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain/3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113|Pfam:PF03446|Pfam:PF02737|Pfam:PF00725;Ontology_term=GO:0003824,GO:0016491,GO:0008152,GO:0006631,GO:0055114,GO:0003857,GO:0004616,GO:0006098 LTnewLM_26 Pfam protein_match 551852 552385 . + . Parent=LTnewLM_260020900.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_26 Pfam protein_match 551858 552415 . + . Parent=LTnewLM_260020900.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_26 Pfam protein_match 552794 552991 . + . Parent=LTnewLM_260020900.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 LTnewLM_26 Pfam protein_match 552797 553333 . + . Parent=LTnewLM_260020900.1:pep;Name=PF02737;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 LTnewLM_26 Pfam protein_match 553343 553627 . + . Parent=LTnewLM_260020900.1:pep;Name=PF00725;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 LTnewLM_26 Pfam protein_match 553721 553978 . + . Parent=LTnewLM_260020900.1:pep;Name=PF00725;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 ### LTnewLM_26 AUGUSTUS gene 556737 562352 1 + . ID=LTnewLM_260021000 LTnewLM_26 AUGUSTUS mRNA 556737 562352 1 + . ID=LTnewLM_260021000.1;Parent=LTnewLM_260021000 LTnewLM_26 AUGUSTUS CDS 556737 562352 1 + 0 ID=LTnewLM_260021000.1:CDS:1;Parent=LTnewLM_260021000.1 ### LTnewLM_26 . polypeptide 556737 562352 . + . ID=LTnewLM_260021000.1:pep;Derives_from=LTnewLM_260021000.1;orthologous_to=LmjF.26.1560_mRNA;ortholog_cluster=OG0003109;product=term%3DSNF2-related domain/RING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger)/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF13445|Pfam:PF00097|Pfam:PF00271;Ontology_term=GO:0005524,GO:0046872,GO:0003677 LTnewLM_26 Pfam protein_match 559059 559568 . + . Parent=LTnewLM_260021000.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_26 Pfam protein_match 560391 561158 . + . Parent=LTnewLM_260021000.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_26 Pfam protein_match 561435 561563 . + . Parent=LTnewLM_260021000.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_26 Pfam protein_match 561435 561569 . + . Parent=LTnewLM_260021000.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 561780 562103 . + . Parent=LTnewLM_260021000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_26 AUGUSTUS gene 566941 568998 1 + . ID=LTnewLM_260021100 LTnewLM_26 AUGUSTUS mRNA 566941 568998 1 + . ID=LTnewLM_260021100.1;Parent=LTnewLM_260021100 LTnewLM_26 AUGUSTUS CDS 566941 568998 1 + 0 ID=LTnewLM_260021100.1:CDS:1;Parent=LTnewLM_260021100.1 ### LTnewLM_26 . polypeptide 566941 568998 . + . ID=LTnewLM_260021100.1:pep;Derives_from=LTnewLM_260021100.1;orthologous_to=LmjF.26.1570_mRNA;ortholog_cluster=OG0003110;product=term%3DPeptidase family M3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01432;Ontology_term=GO:0004222,GO:0006508 LTnewLM_26 Pfam protein_match 567622 568989 . + . Parent=LTnewLM_260021100.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 ### LTnewLM_26 AUGUSTUS gene 570576 572336 1 + . ID=LTnewLM_260021200 LTnewLM_26 AUGUSTUS mRNA 570576 572336 1 + . ID=LTnewLM_260021200.1;Parent=LTnewLM_260021200 LTnewLM_26 AUGUSTUS CDS 570576 572336 1 + 0 ID=LTnewLM_260021200.1:CDS:1;Parent=LTnewLM_260021200.1 ### LTnewLM_26 . polypeptide 570576 572336 . + . ID=LTnewLM_260021200.1:pep;Derives_from=LTnewLM_260021200.1;orthologous_to=LmjF.26.1580_mRNA;ortholog_cluster=OG0003111;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 573045 574835 . + . ID=LTnewLM_260021300:pseudogene;coverage=0.997;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1590_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 573045 574835 . + . ID=LTnewLM_260021300.1;Parent=LTnewLM_260021300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 573045 574835 . + . ID=LTnewLM_260021300.1:pseudogenic_exon:1;Parent=LTnewLM_260021300.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 573045 574835 . + . ID=LTnewLM_260021300.1:pep;Derives_from=LTnewLM_260021300.1;orthologous_to=LmjF.26.1590_mRNA;ortholog_cluster=OG0007550;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 577488 579494 1 + . ID=LTnewLM_260021400 LTnewLM_26 AUGUSTUS mRNA 577488 579494 1 + . ID=LTnewLM_260021400.1;Parent=LTnewLM_260021400 LTnewLM_26 AUGUSTUS CDS 577488 579494 1 + 0 ID=LTnewLM_260021400.1:CDS:1;Parent=LTnewLM_260021400.1 ### LTnewLM_26 . polypeptide 577488 579494 . + . ID=LTnewLM_260021400.1:pep;Derives_from=LTnewLM_260021400.1;orthologous_to=LmjF.26.1600_mRNA;ortholog_cluster=OG0003112;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 580669 582354 1 + . ID=LTnewLM_260021500 LTnewLM_26 AUGUSTUS mRNA 580669 582354 1 + . ID=LTnewLM_260021500.1;Parent=LTnewLM_260021500 LTnewLM_26 AUGUSTUS CDS 580669 582354 1 + 0 ID=LTnewLM_260021500.1:CDS:1;Parent=LTnewLM_260021500.1 ### LTnewLM_26 . polypeptide 580669 582354 . + . ID=LTnewLM_260021500.1:pep;Derives_from=LTnewLM_260021500.1;orthologous_to=LmjF.26.1610_mRNA;ortholog_cluster=OG0003113;product=term%3DProline dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01619 LTnewLM_26 Pfam protein_match 581467 582288 . + . Parent=LTnewLM_260021500.1:pep;Name=PF01619;signature_desc=Proline dehydrogenase ### LTnewLM_26 AUGUSTUS gene 586977 588272 1 + . ID=LTnewLM_260021600 LTnewLM_26 AUGUSTUS mRNA 586977 588272 1 + . ID=LTnewLM_260021600.1;Parent=LTnewLM_260021600 LTnewLM_26 AUGUSTUS CDS 586977 588272 1 + 0 ID=LTnewLM_260021600.1:CDS:1;Parent=LTnewLM_260021600.1 ### LTnewLM_26 . polypeptide 586977 588272 . + . ID=LTnewLM_260021600.1:pep;Derives_from=LTnewLM_260021600.1;orthologous_to=LmjF.26.1620_mRNA;ortholog_cluster=OG0003114;product=term%3DCytidylyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01148;Ontology_term=GO:0016020,GO:0016772 LTnewLM_26 Pfam protein_match 587175 588149 . + . Parent=LTnewLM_260021600.1:pep;Name=PF01148;signature_desc=Cytidylyltransferase family;Ontology_term=GO:0016772,GO:0016020 ### LTnewLM_26 AUGUSTUS gene 589446 589709 1 + . ID=LTnewLM_260021700 LTnewLM_26 AUGUSTUS mRNA 589446 589709 1 + . ID=LTnewLM_260021700.1;Parent=LTnewLM_260021700 LTnewLM_26 AUGUSTUS CDS 589446 589709 1 + 0 ID=LTnewLM_260021700.1:CDS:1;Parent=LTnewLM_260021700.1 ### LTnewLM_26 . polypeptide 589446 589709 . + . ID=LTnewLM_260021700.1:pep;Derives_from=LTnewLM_260021700.1;orthologous_to=LTnewLM_260021800.1,LmjF.26.1630_mRNA,LmjF.26.1640_mRNA;ortholog_cluster=OG0000186;product=term%3DRibosomal protein S28e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01200;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_26 Pfam protein_match 589503 589700 . + . Parent=LTnewLM_260021700.1:pep;Name=PF01200;signature_desc=Ribosomal protein S28e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 590380 590643 1 + . ID=LTnewLM_260021800 LTnewLM_26 AUGUSTUS mRNA 590380 590643 1 + . ID=LTnewLM_260021800.1;Parent=LTnewLM_260021800 LTnewLM_26 AUGUSTUS CDS 590380 590643 1 + 0 ID=LTnewLM_260021800.1:CDS:1;Parent=LTnewLM_260021800.1 ### LTnewLM_26 . polypeptide 590380 590643 . + . ID=LTnewLM_260021800.1:pep;Derives_from=LTnewLM_260021800.1;orthologous_to=LTnewLM_260021700.1,LmjF.26.1630_mRNA,LmjF.26.1640_mRNA;ortholog_cluster=OG0000186;product=term%3DRibosomal protein S28e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01200;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_26 Pfam protein_match 590437 590634 . + . Parent=LTnewLM_260021800.1:pep;Name=PF01200;signature_desc=Ribosomal protein S28e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 591477 592463 1 + . ID=LTnewLM_260021900 LTnewLM_26 AUGUSTUS mRNA 591477 592463 1 + . ID=LTnewLM_260021900.1;Parent=LTnewLM_260021900 LTnewLM_26 AUGUSTUS CDS 591477 592463 1 + 0 ID=LTnewLM_260021900.1:CDS:1;Parent=LTnewLM_260021900.1 ### LTnewLM_26 . polypeptide 591477 592463 . + . ID=LTnewLM_260021900.1:pep;Derives_from=LTnewLM_260021900.1;orthologous_to=LmjF.26.1650_mRNA;ortholog_cluster=OG0003115;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 593279 595090 1 + . ID=LTnewLM_260022000 LTnewLM_26 AUGUSTUS mRNA 593279 595090 1 + . ID=LTnewLM_260022000.1;Parent=LTnewLM_260022000 LTnewLM_26 AUGUSTUS CDS 593279 595090 1 + 0 ID=LTnewLM_260022000.1:CDS:1;Parent=LTnewLM_260022000.1 ### LTnewLM_26 . polypeptide 593279 595090 . + . ID=LTnewLM_260022000.1:pep;Derives_from=LTnewLM_260022000.1;orthologous_to=LmjF.26.1660_mRNA;ortholog_cluster=OG0003116;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 595291 596086 0.72 + . ID=LTnewLM_260022100 LTnewLM_26 AUGUSTUS mRNA 595291 596086 0.72 + . ID=LTnewLM_260022100.1;Parent=LTnewLM_260022100 LTnewLM_26 AUGUSTUS CDS 595291 595386 0.84 + 0 ID=LTnewLM_260022100.1:CDS:1;Parent=LTnewLM_260022100.1 LTnewLM_26 AUGUSTUS CDS 595706 596086 0.87 + 0 ID=LTnewLM_260022100.1:CDS:2;Parent=LTnewLM_260022100.1 ### LTnewLM_26 . polypeptide 595291 596086 . + . ID=LTnewLM_260022100.1:pep;Derives_from=LTnewLM_260022100.1;orthologous_to=LmjF.26.1665_mRNA;ortholog_cluster=OG0003117;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 601840 602898 1 + . ID=LTnewLM_260022200 LTnewLM_26 AUGUSTUS mRNA 601840 602898 1 + . ID=LTnewLM_260022200.1;Parent=LTnewLM_260022200 LTnewLM_26 AUGUSTUS CDS 601840 602898 1 + 0 ID=LTnewLM_260022200.1:CDS:1;Parent=LTnewLM_260022200.1 ### LTnewLM_26 . polypeptide 601840 602898 . + . ID=LTnewLM_260022200.1:pep;Derives_from=LTnewLM_260022200.1;orthologous_to=LTnewLM_260022300.1,LmjF.26.1670_mRNA;ortholog_cluster=OG0000404;product=term%3DSphingolipid Delta4-desaturase (DES)/Fatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08557|Pfam:PF00487;Ontology_term=GO:0006629 LTnewLM_26 Pfam protein_match 601867 601974 . + . Parent=LTnewLM_260022200.1:pep;Name=PF08557;signature_desc=Sphingolipid Delta4-desaturase (DES) LTnewLM_26 Pfam protein_match 602044 602697 . + . Parent=LTnewLM_260022200.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_26 AUGUSTUS gene 604336 605421 1 + . ID=LTnewLM_260022300 LTnewLM_26 AUGUSTUS mRNA 604336 605421 1 + . ID=LTnewLM_260022300.1;Parent=LTnewLM_260022300 LTnewLM_26 AUGUSTUS CDS 604336 605421 1 + 0 ID=LTnewLM_260022300.1:CDS:1;Parent=LTnewLM_260022300.1 ### LTnewLM_26 . polypeptide 604336 605421 . + . ID=LTnewLM_260022300.1:pep;Derives_from=LTnewLM_260022300.1;orthologous_to=LTnewLM_260022200.1,LmjF.26.1670_mRNA;ortholog_cluster=OG0000404;product=term%3DSphingolipid Delta4-desaturase (DES)/Fatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08557|Pfam:PF00487;Ontology_term=GO:0006629 LTnewLM_26 Pfam protein_match 604354 604461 . + . Parent=LTnewLM_260022300.1:pep;Name=PF08557;signature_desc=Sphingolipid Delta4-desaturase (DES) LTnewLM_26 Pfam protein_match 604531 605184 . + . Parent=LTnewLM_260022300.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_26 AUGUSTUS gene 606058 606648 1 + . ID=LTnewLM_260022400 LTnewLM_26 AUGUSTUS mRNA 606058 606648 1 + . ID=LTnewLM_260022400.1;Parent=LTnewLM_260022400 LTnewLM_26 AUGUSTUS CDS 606058 606648 1 + 0 ID=LTnewLM_260022400.1:CDS:1;Parent=LTnewLM_260022400.1 ### LTnewLM_26 . polypeptide 606058 606648 . + . ID=LTnewLM_260022400.1:pep;Derives_from=LTnewLM_260022400.1;orthologous_to=LmjF.26.1710_mRNA;ortholog_cluster=OG0003118;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 607478 607894 1 + . ID=LTnewLM_260022500 LTnewLM_26 AUGUSTUS mRNA 607478 607894 1 + . ID=LTnewLM_260022500.1;Parent=LTnewLM_260022500 LTnewLM_26 AUGUSTUS CDS 607478 607894 1 + 0 ID=LTnewLM_260022500.1:CDS:1;Parent=LTnewLM_260022500.1 ### LTnewLM_26 . polypeptide 607478 607894 . + . ID=LTnewLM_260022500.1:pep;Derives_from=LTnewLM_260022500.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 608584 610704 1 + . ID=LTnewLM_260022600 LTnewLM_26 AUGUSTUS mRNA 608584 610704 1 + . ID=LTnewLM_260022600.1;Parent=LTnewLM_260022600 LTnewLM_26 AUGUSTUS CDS 608584 610704 1 + 0 ID=LTnewLM_260022600.1:CDS:1;Parent=LTnewLM_260022600.1 ### LTnewLM_26 . polypeptide 608584 610704 . + . ID=LTnewLM_260022600.1:pep;Derives_from=LTnewLM_260022600.1;orthologous_to=LmjF.26.1720_mRNA;ortholog_cluster=OG0003119;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 611927 615004 1 + . ID=LTnewLM_260022700 LTnewLM_26 AUGUSTUS mRNA 611927 615004 1 + . ID=LTnewLM_260022700.1;Parent=LTnewLM_260022700 LTnewLM_26 AUGUSTUS CDS 611927 615004 1 + 0 ID=LTnewLM_260022700.1:CDS:1;Parent=LTnewLM_260022700.1 ### LTnewLM_26 . polypeptide 611927 615004 . + . ID=LTnewLM_260022700.1:pep;Derives_from=LTnewLM_260022700.1;orthologous_to=LmjF.26.1730_mRNA;ortholog_cluster=OG0003120;product=term%3DPAS fold/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00989|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524,GO:0006355 LTnewLM_26 Pfam protein_match 612797 612922 . + . Parent=LTnewLM_260022700.1:pep;Name=PF00989;signature_desc=PAS fold;Ontology_term=GO:0006355 LTnewLM_26 Pfam protein_match 614156 614884 . + . Parent=LTnewLM_260022700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 614162 614854 . + . Parent=LTnewLM_260022700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 617460 617759 1 + . ID=LTnewLM_260022800 LTnewLM_26 AUGUSTUS mRNA 617460 617759 1 + . ID=LTnewLM_260022800.1;Parent=LTnewLM_260022800 LTnewLM_26 AUGUSTUS CDS 617460 617759 1 + 0 ID=LTnewLM_260022800.1:CDS:1;Parent=LTnewLM_260022800.1 ### LTnewLM_26 . polypeptide 617460 617759 . + . ID=LTnewLM_260022800.1:pep;Derives_from=LTnewLM_260022800.1;orthologous_to=LTnewLM_360076100.1;ortholog_cluster=OG0003121;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 619642 621654 1 + . ID=LTnewLM_260022900 LTnewLM_26 AUGUSTUS mRNA 619642 621654 1 + . ID=LTnewLM_260022900.1;Parent=LTnewLM_260022900 LTnewLM_26 AUGUSTUS CDS 619642 621654 1 + 0 ID=LTnewLM_260022900.1:CDS:1;Parent=LTnewLM_260022900.1 ### LTnewLM_26 . polypeptide 619642 621654 . + . ID=LTnewLM_260022900.1:pep;Derives_from=LTnewLM_260022900.1;orthologous_to=LmjF.26.1740_mRNA;ortholog_cluster=OG0003122;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 622690 624267 . + . ID=LTnewLM_260023000;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1750_0 LTnewLM_26 Liftoff mRNA 622690 624267 . + . ID=LTnewLM_260023000.1;Parent=LTnewLM_260023000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 622690 624267 . + 0 ID=LTnewLM_260023000.1:CDS:1;Parent=LTnewLM_260023000.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 622690 624267 . + . ID=LTnewLM_260023000.1:pep;Derives_from=LTnewLM_260023000.1;orthologous_to=LmjF.26.1750_mRNA;ortholog_cluster=OG0003123;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 624953 626380 1 + . ID=LTnewLM_260023100 LTnewLM_26 AUGUSTUS mRNA 624953 626380 1 + . ID=LTnewLM_260023100.1;Parent=LTnewLM_260023100 LTnewLM_26 AUGUSTUS CDS 624953 626380 1 + 0 ID=LTnewLM_260023100.1:CDS:1;Parent=LTnewLM_260023100.1 ### LTnewLM_26 . polypeptide 624953 626380 . + . ID=LTnewLM_260023100.1:pep;Derives_from=LTnewLM_260023100.1;orthologous_to=LmjF.26.1760_mRNA;ortholog_cluster=OG0003124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 627361 627681 1 + . ID=LTnewLM_260023200 LTnewLM_26 AUGUSTUS mRNA 627361 627681 1 + . ID=LTnewLM_260023200.1;Parent=LTnewLM_260023200 LTnewLM_26 AUGUSTUS CDS 627361 627681 1 + 0 ID=LTnewLM_260023200.1:CDS:1;Parent=LTnewLM_260023200.1 ### LTnewLM_26 . polypeptide 627361 627681 . + . ID=LTnewLM_260023200.1:pep;Derives_from=LTnewLM_260023200.1;orthologous_to=LmjF.26.1770_mRNA;ortholog_cluster=OG0003125;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 628664 629809 1 + . ID=LTnewLM_260023300 LTnewLM_26 AUGUSTUS mRNA 628664 629809 1 + . ID=LTnewLM_260023300.1;Parent=LTnewLM_260023300 LTnewLM_26 AUGUSTUS CDS 628664 629809 1 + 0 ID=LTnewLM_260023300.1:CDS:1;Parent=LTnewLM_260023300.1 ### LTnewLM_26 . polypeptide 628664 629809 . + . ID=LTnewLM_260023300.1:pep;Derives_from=LTnewLM_260023300.1;orthologous_to=LmjF.26.1755_mRNA;ortholog_cluster=OG0003126;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 630536 631174 1 + . ID=LTnewLM_260023400 LTnewLM_26 AUGUSTUS mRNA 630536 631174 1 + . ID=LTnewLM_260023400.1;Parent=LTnewLM_260023400 LTnewLM_26 AUGUSTUS CDS 630536 631174 1 + 0 ID=LTnewLM_260023400.1:CDS:1;Parent=LTnewLM_260023400.1 ### LTnewLM_26 . polypeptide 630536 631174 . + . ID=LTnewLM_260023400.1:pep;Derives_from=LTnewLM_260023400.1;orthologous_to=LmjF.26.1780_mRNA;ortholog_cluster=OG0003127;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 656396 657385 1 + . ID=LTnewLM_260023500 LTnewLM_26 AUGUSTUS mRNA 656396 657385 1 + . ID=LTnewLM_260023500.1;Parent=LTnewLM_260023500 LTnewLM_26 AUGUSTUS CDS 656396 657385 1 + 0 ID=LTnewLM_260023500.1:CDS:1;Parent=LTnewLM_260023500.1 ### LTnewLM_26 . polypeptide 656396 657385 . + . ID=LTnewLM_260023500.1:pep;Derives_from=LTnewLM_260023500.1;orthologous_to=LmjF.26.1785_mRNA;ortholog_cluster=OG0003128;product=term%3DHistone acetyltransferase subunit NuA4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09340 LTnewLM_26 Pfam protein_match 656492 656623 . + . Parent=LTnewLM_260023500.1:pep;Name=PF09340;signature_desc=Histone acetyltransferase subunit NuA4 ### LTnewLM_26 AUGUSTUS gene 658493 666799 1 + . ID=LTnewLM_260023600 LTnewLM_26 AUGUSTUS mRNA 658493 666799 1 + . ID=LTnewLM_260023600.1;Parent=LTnewLM_260023600 LTnewLM_26 AUGUSTUS CDS 658493 666799 1 + 0 ID=LTnewLM_260023600.1:CDS:1;Parent=LTnewLM_260023600.1 ### LTnewLM_26 . polypeptide 658493 666799 . + . ID=LTnewLM_260023600.1:pep;Derives_from=LTnewLM_260023600.1;orthologous_to=LmjF.26.1790_mRNA;ortholog_cluster=OG0003129;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 667644 668498 1 + . ID=LTnewLM_260023700 LTnewLM_26 AUGUSTUS mRNA 667644 668498 1 + . ID=LTnewLM_260023700.1;Parent=LTnewLM_260023700 LTnewLM_26 AUGUSTUS CDS 667644 668498 1 + 0 ID=LTnewLM_260023700.1:CDS:1;Parent=LTnewLM_260023700.1 ### LTnewLM_26 . polypeptide 667644 668498 . + . ID=LTnewLM_260023700.1:pep;Derives_from=LTnewLM_260023700.1;orthologous_to=LmjF.26.1800_mRNA;ortholog_cluster=OG0003130;product=term%3D6-O-methylguanine DNA methyltransferase%2C DNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01035;Ontology_term=GO:0003824,GO:0006281 LTnewLM_26 Pfam protein_match 668160 668420 . + . Parent=LTnewLM_260023700.1:pep;Name=PF01035;signature_desc=6-O-methylguanine DNA methyltransferase%2C DNA binding domain;Ontology_term=GO:0003824,GO:0006281 ### LTnewLM_26 AUGUSTUS gene 670540 672372 1 + . ID=LTnewLM_260023800 LTnewLM_26 AUGUSTUS mRNA 670540 672372 1 + . ID=LTnewLM_260023800.1;Parent=LTnewLM_260023800 LTnewLM_26 AUGUSTUS CDS 670540 672372 1 + 0 ID=LTnewLM_260023800.1:CDS:1;Parent=LTnewLM_260023800.1 ### LTnewLM_26 . polypeptide 670540 672372 . + . ID=LTnewLM_260023800.1:pep;Derives_from=LTnewLM_260023800.1;orthologous_to=LmjF.26.1810_mRNA;ortholog_cluster=OG0003131;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 677751 684974 1 + . ID=LTnewLM_260023900 LTnewLM_26 AUGUSTUS mRNA 677751 684974 1 + . ID=LTnewLM_260023900.1;Parent=LTnewLM_260023900 LTnewLM_26 AUGUSTUS CDS 677751 684974 1 + 0 ID=LTnewLM_260023900.1:CDS:1;Parent=LTnewLM_260023900.1 ### LTnewLM_26 . polypeptide 677751 684974 . + . ID=LTnewLM_260023900.1:pep;Derives_from=LTnewLM_260023900.1;orthologous_to=LmjF.26.1820_mRNA;ortholog_cluster=OG0003132;product=term%3DProtein of unknown function (DUF789)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05623 LTnewLM_26 Pfam protein_match 682962 683540 . + . Parent=LTnewLM_260023900.1:pep;Name=PF05623;signature_desc=Protein of unknown function (DUF789) ### LTnewLM_26 AUGUSTUS gene 686417 689041 1 + . ID=LTnewLM_260024000 LTnewLM_26 AUGUSTUS mRNA 686417 689041 1 + . ID=LTnewLM_260024000.1;Parent=LTnewLM_260024000 LTnewLM_26 AUGUSTUS CDS 686417 689041 1 + 0 ID=LTnewLM_260024000.1:CDS:1;Parent=LTnewLM_260024000.1 ### LTnewLM_26 . polypeptide 686417 689041 . + . ID=LTnewLM_260024000.1:pep;Derives_from=LTnewLM_260024000.1;orthologous_to=LmjF.26.1830_mRNA;ortholog_cluster=OG0003133;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 690703 693666 1 + . ID=LTnewLM_260024100 LTnewLM_26 AUGUSTUS mRNA 690703 693666 1 + . ID=LTnewLM_260024100.1;Parent=LTnewLM_260024100 LTnewLM_26 AUGUSTUS CDS 690703 693666 1 + 0 ID=LTnewLM_260024100.1:CDS:1;Parent=LTnewLM_260024100.1 ### LTnewLM_26 . polypeptide 690703 693666 . + . ID=LTnewLM_260024100.1:pep;Derives_from=LTnewLM_260024100.1;orthologous_to=LmjF.26.1840_mRNA;ortholog_cluster=OG0003134;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 695116 696372 1 + . ID=LTnewLM_260024200 LTnewLM_26 AUGUSTUS mRNA 695116 696372 1 + . ID=LTnewLM_260024200.1;Parent=LTnewLM_260024200 LTnewLM_26 AUGUSTUS CDS 695116 696372 1 + 0 ID=LTnewLM_260024200.1:CDS:1;Parent=LTnewLM_260024200.1 ### LTnewLM_26 . polypeptide 695116 696372 . + . ID=LTnewLM_260024200.1:pep;Derives_from=LTnewLM_260024200.1;orthologous_to=LmjF.26.1850_mRNA;ortholog_cluster=OG0003135;product=term%3DELMO/CED-12 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04727;Ontology_term=GO:0006909,GO:0005856 LTnewLM_26 Pfam protein_match 695680 696303 . + . Parent=LTnewLM_260024200.1:pep;Name=PF04727;signature_desc=ELMO/CED-12 family;Ontology_term=GO:0006909,GO:0005856 ### LTnewLM_26 . pseudogene 697409 699213 . + . ID=LTnewLM_260024300:pseudogene;coverage=0.996;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1860_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 697409 699213 . + . ID=LTnewLM_260024300.1;Parent=LTnewLM_260024300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 697409 699213 . + . ID=LTnewLM_260024300.1:pseudogenic_exon:1;Parent=LTnewLM_260024300.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 697409 699213 . + . ID=LTnewLM_260024300.1:pep;Derives_from=LTnewLM_260024300.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 702074 710923 0.99 + . ID=LTnewLM_260024400 LTnewLM_26 AUGUSTUS mRNA 702074 710923 0.99 + . ID=LTnewLM_260024400.1;Parent=LTnewLM_260024400 LTnewLM_26 AUGUSTUS CDS 702074 710923 0.99 + 0 ID=LTnewLM_260024400.1:CDS:1;Parent=LTnewLM_260024400.1 ### LTnewLM_26 . polypeptide 702074 710923 . + . ID=LTnewLM_260024400.1:pep;Derives_from=LTnewLM_260024400.1;orthologous_to=LmjF.26.1870_mRNA;ortholog_cluster=OG0003136;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 711856 714060 1 + . ID=LTnewLM_260024500 LTnewLM_26 AUGUSTUS mRNA 711856 714060 1 + . ID=LTnewLM_260024500.1;Parent=LTnewLM_260024500 LTnewLM_26 AUGUSTUS CDS 711856 714060 1 + 0 ID=LTnewLM_260024500.1:CDS:1;Parent=LTnewLM_260024500.1 ### LTnewLM_26 . polypeptide 711856 714060 . + . ID=LTnewLM_260024500.1:pep;Derives_from=LTnewLM_260024500.1;orthologous_to=LmjF.26.1880_mRNA;ortholog_cluster=OG0003137;product=term%3DDomain of unknown function (DUF4460)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14687 LTnewLM_26 Pfam protein_match 711862 711990 . + . Parent=LTnewLM_260024500.1:pep;Name=PF14687;signature_desc=Domain of unknown function (DUF4460) ### LTnewLM_26 AUGUSTUS gene 718123 719076 1 + . ID=LTnewLM_260024600 LTnewLM_26 AUGUSTUS mRNA 718123 719076 1 + . ID=LTnewLM_260024600.1;Parent=LTnewLM_260024600 LTnewLM_26 AUGUSTUS CDS 718123 719076 1 + 0 ID=LTnewLM_260024600.1:CDS:1;Parent=LTnewLM_260024600.1 ### LTnewLM_26 . polypeptide 718123 719076 . + . ID=LTnewLM_260024600.1:pep;Derives_from=LTnewLM_260024600.1;orthologous_to=LmjF.26.1890_mRNA;ortholog_cluster=OG0003138;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 720259 723927 1 + . ID=LTnewLM_260024700 LTnewLM_26 AUGUSTUS mRNA 720259 723927 1 + . ID=LTnewLM_260024700.1;Parent=LTnewLM_260024700 LTnewLM_26 AUGUSTUS CDS 720259 723927 1 + 0 ID=LTnewLM_260024700.1:CDS:1;Parent=LTnewLM_260024700.1 ### LTnewLM_26 . polypeptide 720259 723927 . + . ID=LTnewLM_260024700.1:pep;Derives_from=LTnewLM_260024700.1;orthologous_to=LmjF.26.1900_mRNA;ortholog_cluster=OG0003139;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 725337 726317 1 + . ID=LTnewLM_260024800 LTnewLM_26 AUGUSTUS mRNA 725337 726317 1 + . ID=LTnewLM_260024800.1;Parent=LTnewLM_260024800 LTnewLM_26 AUGUSTUS CDS 725337 726317 1 + 0 ID=LTnewLM_260024800.1:CDS:1;Parent=LTnewLM_260024800.1 ### LTnewLM_26 . polypeptide 725337 726317 . + . ID=LTnewLM_260024800.1:pep;Derives_from=LTnewLM_260024800.1;orthologous_to=LmjF.26.1910_mRNA;ortholog_cluster=OG0003140;product=term%3DHEAT repeats/PBS lyase HEAT-like repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13646|Pfam:PF03130 LTnewLM_26 Pfam protein_match 725517 725744 . + . Parent=LTnewLM_260024800.1:pep;Name=PF13646;signature_desc=HEAT repeats LTnewLM_26 Pfam protein_match 725622 725687 . + . Parent=LTnewLM_260024800.1:pep;Name=PF03130;signature_desc=PBS lyase HEAT-like repeat LTnewLM_26 Pfam protein_match 725991 726251 . + . Parent=LTnewLM_260024800.1:pep;Name=PF13646;signature_desc=HEAT repeats LTnewLM_26 Pfam protein_match 726039 726113 . + . Parent=LTnewLM_260024800.1:pep;Name=PF03130;signature_desc=PBS lyase HEAT-like repeat LTnewLM_26 Pfam protein_match 726135 726197 . + . Parent=LTnewLM_260024800.1:pep;Name=PF03130;signature_desc=PBS lyase HEAT-like repeat ### LTnewLM_26 AUGUSTUS gene 728297 729214 1 + . ID=LTnewLM_260024900 LTnewLM_26 AUGUSTUS mRNA 728297 729214 1 + . ID=LTnewLM_260024900.1;Parent=LTnewLM_260024900 LTnewLM_26 AUGUSTUS CDS 728297 729214 1 + 0 ID=LTnewLM_260024900.1:CDS:1;Parent=LTnewLM_260024900.1 ### LTnewLM_26 . polypeptide 728297 729214 . + . ID=LTnewLM_260024900.1:pep;Derives_from=LTnewLM_260024900.1;orthologous_to=LmjF.26.1920_mRNA;ortholog_cluster=OG0003141;product=term%3DTLC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03798;Ontology_term=GO:0016021 LTnewLM_26 Pfam protein_match 728465 729106 . + . Parent=LTnewLM_260024900.1:pep;Name=PF03798;signature_desc=TLC domain;Ontology_term=GO:0016021 ### LTnewLM_26 AUGUSTUS gene 730519 735960 1 + . ID=LTnewLM_260025000 LTnewLM_26 AUGUSTUS mRNA 730519 735960 1 + . ID=LTnewLM_260025000.1;Parent=LTnewLM_260025000 LTnewLM_26 AUGUSTUS CDS 730519 735960 1 + 0 ID=LTnewLM_260025000.1:CDS:1;Parent=LTnewLM_260025000.1 ### LTnewLM_26 . polypeptide 730519 735960 . + . ID=LTnewLM_260025000.1:pep;Derives_from=LTnewLM_260025000.1;orthologous_to=LmjF.26.1930_mRNA;ortholog_cluster=OG0003142;product=term%3DDomain of unknown function (DUF4457)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14652 LTnewLM_26 Pfam protein_match 732421 732537 . + . Parent=LTnewLM_260025000.1:pep;Name=PF14652;signature_desc=Domain of unknown function (DUF4457) ### LTnewLM_26 . pseudogene 737636 738703 . + . ID=LTnewLM_260025100:pseudogene;coverage=0.997;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.1940_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 737636 738703 . + . ID=LTnewLM_260025100.1;Parent=LTnewLM_260025100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 737636 738703 . + . ID=LTnewLM_260025100.1:pseudogenic_exon:1;Parent=LTnewLM_260025100.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 737636 738703 . + . ID=LTnewLM_260025100.1:pep;Derives_from=LTnewLM_260025100.1;orthologous_to=LmjF.26.1940_mRNA;ortholog_cluster=OG0007551;product=term%3DThioesterase-like superfamily/Thioesterase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13279|Pfam:PF03061 LTnewLM_26 Pfam protein_match 737924 738256 . + . Parent=LTnewLM_260025100.1:pep;Name=PF13279;signature_desc=Thioesterase-like superfamily LTnewLM_26 Pfam protein_match 737939 738121 . + . Parent=LTnewLM_260025100.1:pep;Name=PF03061;signature_desc=Thioesterase superfamily ### LTnewLM_26 AUGUSTUS gene 742096 749694 1 + . ID=LTnewLM_260025200 LTnewLM_26 AUGUSTUS mRNA 742096 749694 1 + . ID=LTnewLM_260025200.1;Parent=LTnewLM_260025200 LTnewLM_26 AUGUSTUS CDS 742096 749694 1 + 0 ID=LTnewLM_260025200.1:CDS:1;Parent=LTnewLM_260025200.1 ### LTnewLM_26 . polypeptide 742096 749694 . + . ID=LTnewLM_260025200.1:pep;Derives_from=LTnewLM_260025200.1;orthologous_to=LmjF.25.1060_mRNA,LmjF.26.1950_mRNA;ortholog_cluster=OG0000405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 751696 754236 1 + . ID=LTnewLM_260025300 LTnewLM_26 AUGUSTUS mRNA 751696 754236 1 + . ID=LTnewLM_260025300.1;Parent=LTnewLM_260025300 LTnewLM_26 AUGUSTUS CDS 751696 754236 1 + 0 ID=LTnewLM_260025300.1:CDS:1;Parent=LTnewLM_260025300.1 ### LTnewLM_26 . polypeptide 751696 754236 . + . ID=LTnewLM_260025300.1:pep;Derives_from=LTnewLM_260025300.1;orthologous_to=LmjF.26.1960_mRNA;ortholog_cluster=OG0003143;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 759747 761045 1 + . ID=LTnewLM_260025400 LTnewLM_26 AUGUSTUS mRNA 759747 761045 1 + . ID=LTnewLM_260025400.1;Parent=LTnewLM_260025400 LTnewLM_26 AUGUSTUS CDS 759747 761045 1 + 0 ID=LTnewLM_260025400.1:CDS:1;Parent=LTnewLM_260025400.1 ### LTnewLM_26 . polypeptide 759747 761045 . + . ID=LTnewLM_260025400.1:pep;Derives_from=LTnewLM_260025400.1;orthologous_to=LmjF.26.1970_mRNA;ortholog_cluster=OG0003144;product=term%3DSCO1/SenC%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02630 LTnewLM_26 Pfam protein_match 760365 760781 . + . Parent=LTnewLM_260025400.1:pep;Name=PF02630;signature_desc=SCO1/SenC ### LTnewLM_26 AUGUSTUS gene 761812 762432 1 + . ID=LTnewLM_260025500 LTnewLM_26 AUGUSTUS mRNA 761812 762432 1 + . ID=LTnewLM_260025500.1;Parent=LTnewLM_260025500 LTnewLM_26 AUGUSTUS CDS 761812 762432 1 + 0 ID=LTnewLM_260025500.1:CDS:1;Parent=LTnewLM_260025500.1 ### LTnewLM_26 . polypeptide 761812 762432 . + . ID=LTnewLM_260025500.1:pep;Derives_from=LTnewLM_260025500.1;orthologous_to=LmjF.26.1980_mRNA;ortholog_cluster=OG0003145;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 767481 768161 1 + . ID=LTnewLM_260025600 LTnewLM_26 AUGUSTUS mRNA 767481 768161 1 + . ID=LTnewLM_260025600.1;Parent=LTnewLM_260025600 LTnewLM_26 AUGUSTUS CDS 767481 768161 1 + 0 ID=LTnewLM_260025600.1:CDS:1;Parent=LTnewLM_260025600.1 ### LTnewLM_26 . polypeptide 767481 768161 . + . ID=LTnewLM_260025600.1:pep;Derives_from=LTnewLM_260025600.1;orthologous_to=LmjF.26.1990_mRNA;ortholog_cluster=OG0003146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 770633 771682 1 + . ID=LTnewLM_260025700 LTnewLM_26 AUGUSTUS mRNA 770633 771682 1 + . ID=LTnewLM_260025700.1;Parent=LTnewLM_260025700 LTnewLM_26 AUGUSTUS CDS 770633 771682 1 + 0 ID=LTnewLM_260025700.1:CDS:1;Parent=LTnewLM_260025700.1 ### LTnewLM_26 . polypeptide 770633 771682 . + . ID=LTnewLM_260025700.1:pep;Derives_from=LTnewLM_260025700.1;orthologous_to=LmjF.26.2000_mRNA;ortholog_cluster=OG0003147;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489|Pfam:PF13847|Pfam:PF08242|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_26 Pfam protein_match 770972 771538 . + . Parent=LTnewLM_260025700.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_26 Pfam protein_match 771014 771487 . + . Parent=LTnewLM_260025700.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_26 Pfam protein_match 771023 771457 . + . Parent=LTnewLM_260025700.1:pep;Name=PF08242;signature_desc=Methyltransferase domain LTnewLM_26 Pfam protein_match 771023 771463 . + . Parent=LTnewLM_260025700.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_26 AUGUSTUS gene 772850 775033 1 + . ID=LTnewLM_260025800 LTnewLM_26 AUGUSTUS mRNA 772850 775033 1 + . ID=LTnewLM_260025800.1;Parent=LTnewLM_260025800 LTnewLM_26 AUGUSTUS CDS 772850 775033 1 + 0 ID=LTnewLM_260025800.1:CDS:1;Parent=LTnewLM_260025800.1 ### LTnewLM_26 . polypeptide 772850 775033 . + . ID=LTnewLM_260025800.1:pep;Derives_from=LTnewLM_260025800.1;orthologous_to=LmjF.26.2010_mRNA;ortholog_cluster=OG0003148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 775884 776168 1 + . ID=LTnewLM_260025900 LTnewLM_26 AUGUSTUS mRNA 775884 776168 1 + . ID=LTnewLM_260025900.1;Parent=LTnewLM_260025900 LTnewLM_26 AUGUSTUS CDS 775884 776168 1 + 0 ID=LTnewLM_260025900.1:CDS:1;Parent=LTnewLM_260025900.1 ### LTnewLM_26 . polypeptide 775884 776168 . + . ID=LTnewLM_260025900.1:pep;Derives_from=LTnewLM_260025900.1;orthologous_to=LmjF.26.2020_mRNA;ortholog_cluster=OG0003149;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 776821 779230 . + . ID=LTnewLM_260026000:pseudogene;coverage=0.987;sequence_ID=0.930;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.2030_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 776821 779230 . + . ID=LTnewLM_260026000.1;Parent=LTnewLM_260026000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 776881 779230 . + . ID=LTnewLM_260026000.1:pseudogenic_exon:1;Parent=LTnewLM_260026000.1;extra_copy_number=0 LTnewLM_26 . pseudogenic_transcript 776915 779230 . + . ID=LTnewLM_260026000.2;Parent=LTnewLM_260026000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 776990 779230 . + . ID=LTnewLM_260026000.2:pseudogenic_exon:1;Parent=LTnewLM_260026000.2;extra_copy_number=0 ### LTnewLM_26 . polypeptide 776881 779230 . + . ID=LTnewLM_260026000.1:pep;Derives_from=LTnewLM_260026000.1;product=term%3Dhypothetical protein ### LTnewLM_26 . polypeptide 776990 779230 . + . ID=LTnewLM_260026000.2:pep;Derives_from=LTnewLM_260026000.2;orthologous_to=LmjF.26.2030.1_mRNA,LmjF.26.2030.2_mRNA;ortholog_cluster=OG0000528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 780179 781285 1 + . ID=LTnewLM_260026100 LTnewLM_26 AUGUSTUS mRNA 780179 781285 1 + . ID=LTnewLM_260026100.1;Parent=LTnewLM_260026100 LTnewLM_26 AUGUSTUS CDS 780179 781285 1 + 0 ID=LTnewLM_260026100.1:CDS:1;Parent=LTnewLM_260026100.1 ### LTnewLM_26 . polypeptide 780179 781285 . + . ID=LTnewLM_260026100.1:pep;Derives_from=LTnewLM_260026100.1;orthologous_to=LmjF.26.2040_mRNA;ortholog_cluster=OG0003150;product=term%3DPQ loop repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04193 LTnewLM_26 Pfam protein_match 780908 781075 . + . Parent=LTnewLM_260026100.1:pep;Name=PF04193;signature_desc=PQ loop repeat ### LTnewLM_26 AUGUSTUS gene 782683 785343 0.99 + . ID=LTnewLM_260026200 LTnewLM_26 AUGUSTUS mRNA 782683 785343 0.99 + . ID=LTnewLM_260026200.1;Parent=LTnewLM_260026200 LTnewLM_26 AUGUSTUS CDS 782683 785343 0.99 + 0 ID=LTnewLM_260026200.1:CDS:1;Parent=LTnewLM_260026200.1 ### LTnewLM_26 . polypeptide 782683 785343 . + . ID=LTnewLM_260026200.1:pep;Derives_from=LTnewLM_260026200.1;orthologous_to=LmjF.26.2050_mRNA;ortholog_cluster=OG0003151;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 788070 791387 1 + . ID=LTnewLM_260026300 LTnewLM_26 AUGUSTUS mRNA 788070 791387 1 + . ID=LTnewLM_260026300.1;Parent=LTnewLM_260026300 LTnewLM_26 AUGUSTUS CDS 788070 791387 1 + 0 ID=LTnewLM_260026300.1:CDS:1;Parent=LTnewLM_260026300.1 ### LTnewLM_26 . polypeptide 788070 791387 . + . ID=LTnewLM_260026300.1:pep;Derives_from=LTnewLM_260026300.1;orthologous_to=LmjF.26.2060_mRNA;ortholog_cluster=OG0003152;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_26 Pfam protein_match 790803 791237 . + . Parent=LTnewLM_260026300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 790809 790985 . + . Parent=LTnewLM_260026300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 792657 796724 1 + . ID=LTnewLM_260026400 LTnewLM_26 AUGUSTUS mRNA 792657 796724 1 + . ID=LTnewLM_260026400.1;Parent=LTnewLM_260026400 LTnewLM_26 AUGUSTUS CDS 792657 796724 1 + 0 ID=LTnewLM_260026400.1:CDS:1;Parent=LTnewLM_260026400.1 ### LTnewLM_26 . polypeptide 792657 796724 . + . ID=LTnewLM_260026400.1:pep;Derives_from=LTnewLM_260026400.1;orthologous_to=LmjF.26.2070_mRNA;ortholog_cluster=OG0003153;product=term%3DUlp1 protease family%2C C-terminal catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02902;Ontology_term=GO:0008234,GO:0006508 LTnewLM_26 Pfam protein_match 795606 795998 . + . Parent=LTnewLM_260026400.1:pep;Name=PF02902;signature_desc=Ulp1 protease family%2C C-terminal catalytic domain;Ontology_term=GO:0008234,GO:0006508 LTnewLM_26 Pfam protein_match 796524 796640 . + . Parent=LTnewLM_260026400.1:pep;Name=PF02902;signature_desc=Ulp1 protease family%2C C-terminal catalytic domain;Ontology_term=GO:0008234,GO:0006508 ### LTnewLM_26 . pseudogene 799812 800870 . + . ID=LTnewLM_260026500:pseudogene;coverage=0.935;sequence_ID=0.856;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2080_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 799812 800870 . + . ID=LTnewLM_260026500.1;Parent=LTnewLM_260026500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 799812 800870 . + . ID=LTnewLM_260026500.1:pseudogenic_exon:1;Parent=LTnewLM_260026500.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 799812 800870 . + . ID=LTnewLM_260026500.1:pep;Derives_from=LTnewLM_260026500.1;orthologous_to=LmjF.26.2080_mRNA;ortholog_cluster=OG0007552;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 805702 806043 1 + . ID=LTnewLM_260026600 LTnewLM_26 AUGUSTUS mRNA 805702 806043 1 + . ID=LTnewLM_260026600.1;Parent=LTnewLM_260026600 LTnewLM_26 AUGUSTUS CDS 805702 806043 1 + 0 ID=LTnewLM_260026600.1:CDS:1;Parent=LTnewLM_260026600.1 ### LTnewLM_26 . polypeptide 805702 806043 . + . ID=LTnewLM_260026600.1:pep;Derives_from=LTnewLM_260026600.1;orthologous_to=LmjF.26.2090_mRNA;ortholog_cluster=OG0003154;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 Liftoff gene 809612 812617 . + . ID=LTnewLM_260026700;coverage=0.994;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2100_0 LTnewLM_26 Liftoff mRNA 809612 812617 . + . ID=LTnewLM_260026700.1;Parent=LTnewLM_260026700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 809612 812617 . + 0 ID=LTnewLM_260026700.1:CDS:1;Parent=LTnewLM_260026700.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 809612 812617 . + . ID=LTnewLM_260026700.1:pep;Derives_from=LTnewLM_260026700.1;orthologous_to=LmjF.26.2100_mRNA;ortholog_cluster=OG0003155;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_26 Pfam protein_match 810860 811210 . + . Parent=LTnewLM_260026700.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_26 AUGUSTUS gene 818763 824069 1 + . ID=LTnewLM_260026800 LTnewLM_26 AUGUSTUS mRNA 818763 824069 1 + . ID=LTnewLM_260026800.1;Parent=LTnewLM_260026800 LTnewLM_26 AUGUSTUS CDS 818763 824069 1 + 0 ID=LTnewLM_260026800.1:CDS:1;Parent=LTnewLM_260026800.1 ### LTnewLM_26 . polypeptide 818763 824069 . + . ID=LTnewLM_260026800.1:pep;Derives_from=LTnewLM_260026800.1;orthologous_to=LmjF.26.2110_mRNA;ortholog_cluster=OG0003156;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_26 Pfam protein_match 821160 821444 . + . Parent=LTnewLM_260026800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 822729 823064 . + . Parent=LTnewLM_260026800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_26 . pseudogene 826240 838670 . + . ID=LTnewLM_260026900:pseudogene;coverage=0.995;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2120_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 826240 838670 . + . ID=LTnewLM_260026900.1;Parent=LTnewLM_260026900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 826240 838670 . + . ID=LTnewLM_260026900.1:pseudogenic_exon:1;Parent=LTnewLM_260026900.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 826240 838670 . + . ID=LTnewLM_260026900.1:pep;Derives_from=LTnewLM_260026900.1;orthologous_to=LmjF.26.2120_mRNA;ortholog_cluster=OG0007553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 839281 840048 1 + . ID=LTnewLM_260027000 LTnewLM_26 AUGUSTUS mRNA 839281 840048 1 + . ID=LTnewLM_260027000.1;Parent=LTnewLM_260027000 LTnewLM_26 AUGUSTUS CDS 839281 840048 1 + 0 ID=LTnewLM_260027000.1:CDS:1;Parent=LTnewLM_260027000.1 ### LTnewLM_26 . polypeptide 839281 840048 . + . ID=LTnewLM_260027000.1:pep;Derives_from=LTnewLM_260027000.1;orthologous_to=LmjF.26.2130_mRNA;ortholog_cluster=OG0003157;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 841109 841450 1 + . ID=LTnewLM_260027100 LTnewLM_26 AUGUSTUS mRNA 841109 841450 1 + . ID=LTnewLM_260027100.1;Parent=LTnewLM_260027100 LTnewLM_26 AUGUSTUS CDS 841109 841450 1 + 0 ID=LTnewLM_260027100.1:CDS:1;Parent=LTnewLM_260027100.1 ### LTnewLM_26 . polypeptide 841109 841450 . + . ID=LTnewLM_260027100.1:pep;Derives_from=LTnewLM_260027100.1;orthologous_to=LmjF.26.2140_mRNA;ortholog_cluster=OG0003158;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 842498 844174 1 + . ID=LTnewLM_260027200 LTnewLM_26 AUGUSTUS mRNA 842498 844174 1 + . ID=LTnewLM_260027200.1;Parent=LTnewLM_260027200 LTnewLM_26 AUGUSTUS CDS 842498 844174 1 + 0 ID=LTnewLM_260027200.1:CDS:1;Parent=LTnewLM_260027200.1 ### LTnewLM_26 . polypeptide 842498 844174 . + . ID=LTnewLM_260027200.1:pep;Derives_from=LTnewLM_260027200.1;orthologous_to=LmjF.26.2150_mRNA;ortholog_cluster=OG0003159;product=term%3DFtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_26 Pfam protein_match 842963 843595 . + . Parent=LTnewLM_260027200.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_26 AUGUSTUS gene 846482 853264 1 + . ID=LTnewLM_260027300 LTnewLM_26 AUGUSTUS mRNA 846482 853264 1 + . ID=LTnewLM_260027300.1;Parent=LTnewLM_260027300 LTnewLM_26 AUGUSTUS CDS 846482 853264 1 + 0 ID=LTnewLM_260027300.1:CDS:1;Parent=LTnewLM_260027300.1 ### LTnewLM_26 . polypeptide 846482 853264 . + . ID=LTnewLM_260027300.1:pep;Derives_from=LTnewLM_260027300.1;orthologous_to=LmjF.26.2160_mRNA;ortholog_cluster=OG0003160;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 857720 863709 . + . ID=LTnewLM_260027400:pseudogene;coverage=0.717;sequence_ID=0.647;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2170_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 857720 863709 . + . ID=LTnewLM_260027400.1;Parent=LTnewLM_260027400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 857720 863709 . + . ID=LTnewLM_260027400.1:pseudogenic_exon:1;Parent=LTnewLM_260027400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 857720 863709 . + . ID=LTnewLM_260027400.1:pep;Derives_from=LTnewLM_260027400.1;orthologous_to=LmjF.26.2170_mRNA;ortholog_cluster=OG0007554;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 865876 870516 1 + . ID=LTnewLM_260027500 LTnewLM_26 AUGUSTUS mRNA 865876 870516 1 + . ID=LTnewLM_260027500.1;Parent=LTnewLM_260027500 LTnewLM_26 AUGUSTUS CDS 865876 870516 1 + 0 ID=LTnewLM_260027500.1:CDS:1;Parent=LTnewLM_260027500.1 ### LTnewLM_26 . polypeptide 865876 870516 . + . ID=LTnewLM_260027500.1:pep;Derives_from=LTnewLM_260027500.1;orthologous_to=LmjF.26.2180_mRNA;ortholog_cluster=OG0003161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 871214 872428 1 + . ID=LTnewLM_260027600 LTnewLM_26 AUGUSTUS mRNA 871214 872428 1 + . ID=LTnewLM_260027600.1;Parent=LTnewLM_260027600 LTnewLM_26 AUGUSTUS CDS 871214 872428 1 + 0 ID=LTnewLM_260027600.1:CDS:1;Parent=LTnewLM_260027600.1 ### LTnewLM_26 . polypeptide 871214 872428 . + . ID=LTnewLM_260027600.1:pep;Derives_from=LTnewLM_260027600.1;orthologous_to=LmjF.26.2190_mRNA;ortholog_cluster=OG0003162;product=term%3DADP-ribosylation factor family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025;Ontology_term=GO:0005525 LTnewLM_26 Pfam protein_match 871751 871864 . + . Parent=LTnewLM_260027600.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 ### LTnewLM_26 AUGUSTUS gene 873724 874098 1 + . ID=LTnewLM_260027700 LTnewLM_26 AUGUSTUS mRNA 873724 874098 1 + . ID=LTnewLM_260027700.1;Parent=LTnewLM_260027700 LTnewLM_26 AUGUSTUS CDS 873724 874098 1 + 0 ID=LTnewLM_260027700.1:CDS:1;Parent=LTnewLM_260027700.1 ### LTnewLM_26 . polypeptide 873724 874098 . + . ID=LTnewLM_260027700.1:pep;Derives_from=LTnewLM_260027700.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 875181 876776 1 + . ID=LTnewLM_260027800 LTnewLM_26 AUGUSTUS mRNA 875181 876776 1 + . ID=LTnewLM_260027800.1;Parent=LTnewLM_260027800 LTnewLM_26 AUGUSTUS CDS 875181 876776 1 + 0 ID=LTnewLM_260027800.1:CDS:1;Parent=LTnewLM_260027800.1 ### LTnewLM_26 . polypeptide 875181 876776 . + . ID=LTnewLM_260027800.1:pep;Derives_from=LTnewLM_260027800.1;orthologous_to=LmjF.26.2200_mRNA;ortholog_cluster=OG0003163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 878316 880925 1 + . ID=LTnewLM_260027900 LTnewLM_26 AUGUSTUS mRNA 878316 880925 1 + . ID=LTnewLM_260027900.1;Parent=LTnewLM_260027900 LTnewLM_26 AUGUSTUS CDS 878316 880925 1 + 0 ID=LTnewLM_260027900.1:CDS:1;Parent=LTnewLM_260027900.1 ### LTnewLM_26 . polypeptide 878316 880925 . + . ID=LTnewLM_260027900.1:pep;Derives_from=LTnewLM_260027900.1;orthologous_to=LmjF.26.2210_mRNA;ortholog_cluster=OG0003164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 881663 881914 1 + . ID=LTnewLM_260028000 LTnewLM_26 AUGUSTUS mRNA 881663 881914 1 + . ID=LTnewLM_260028000.1;Parent=LTnewLM_260028000 LTnewLM_26 AUGUSTUS CDS 881663 881914 1 + 0 ID=LTnewLM_260028000.1:CDS:1;Parent=LTnewLM_260028000.1 ### LTnewLM_26 . polypeptide 881663 881914 . + . ID=LTnewLM_260028000.1:pep;Derives_from=LTnewLM_260028000.1;orthologous_to=LTnewLM_030007400.1,LmjF.03.0250_mRNA,LmjF.26.2220_mRNA;ortholog_cluster=OG0000187;product=term%3DRibosomal L38e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01781;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_26 Pfam protein_match 881666 881863 . + . Parent=LTnewLM_260028000.1:pep;Name=PF01781;signature_desc=Ribosomal L38e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 882943 884292 1 + . ID=LTnewLM_260028100 LTnewLM_26 AUGUSTUS mRNA 882943 884292 1 + . ID=LTnewLM_260028100.1;Parent=LTnewLM_260028100 LTnewLM_26 AUGUSTUS CDS 882943 884292 1 + 0 ID=LTnewLM_260028100.1:CDS:1;Parent=LTnewLM_260028100.1 ### LTnewLM_26 . polypeptide 882943 884292 . + . ID=LTnewLM_260028100.1:pep;Derives_from=LTnewLM_260028100.1;orthologous_to=LmjF.26.2230_mRNA;ortholog_cluster=OG0003165;product=term%3DNAD dependent epimerase/dehydratase family/3-beta hydroxysteroid dehydrogenase/isomerase family/GDP-mannose 4%2C6 dehydratase/Polysaccharide biosynthesis protein/RmlD substrate binding domain/Male sterility protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01370|Pfam:PF01073|Pfam:PF16363|Pfam:PF02719|Pfam:PF04321|Pfam:PF07993;Ontology_term=GO:0003824,GO:0003854,GO:0009058,GO:0050662,GO:0055114,GO:0016616,GO:0006694 LTnewLM_26 Pfam protein_match 883120 883953 . + . Parent=LTnewLM_260028100.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_26 Pfam protein_match 883366 883902 . + . Parent=LTnewLM_260028100.1:pep;Name=PF01073;signature_desc=3-beta hydroxysteroid dehydrogenase/isomerase family;Ontology_term=GO:0003854,GO:0016616,GO:0006694,GO:0055114 LTnewLM_26 Pfam protein_match 883366 884184 . + . Parent=LTnewLM_260028100.1:pep;Name=PF16363;signature_desc=GDP-mannose 4%2C6 dehydratase LTnewLM_26 Pfam protein_match 883381 884010 . + . Parent=LTnewLM_260028100.1:pep;Name=PF02719;signature_desc=Polysaccharide biosynthesis protein;Ontology_term=GO:0009058 LTnewLM_26 Pfam protein_match 883393 884055 . + . Parent=LTnewLM_260028100.1:pep;Name=PF04321;signature_desc=RmlD substrate binding domain LTnewLM_26 Pfam protein_match 883435 883902 . + . Parent=LTnewLM_260028100.1:pep;Name=PF07993;signature_desc=Male sterility protein ### LTnewLM_26 AUGUSTUS gene 885171 886577 1 + . ID=LTnewLM_260028200 LTnewLM_26 AUGUSTUS mRNA 885171 886577 1 + . ID=LTnewLM_260028200.1;Parent=LTnewLM_260028200 LTnewLM_26 AUGUSTUS CDS 885171 886577 1 + 0 ID=LTnewLM_260028200.1:CDS:1;Parent=LTnewLM_260028200.1 ### LTnewLM_26 . polypeptide 885171 886577 . + . ID=LTnewLM_260028200.1:pep;Derives_from=LTnewLM_260028200.1;orthologous_to=LmjF.26.2240_mRNA;ortholog_cluster=OG0003166;product=term%3DAminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00266;Ontology_term=GO:0008152 LTnewLM_26 Pfam protein_match 885744 886271 . + . Parent=LTnewLM_260028200.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_26 AUGUSTUS gene 887666 890143 1 + . ID=LTnewLM_260028300 LTnewLM_26 AUGUSTUS mRNA 887666 890143 1 + . ID=LTnewLM_260028300.1;Parent=LTnewLM_260028300 LTnewLM_26 AUGUSTUS CDS 887666 890143 1 + 0 ID=LTnewLM_260028300.1:CDS:1;Parent=LTnewLM_260028300.1 ### LTnewLM_26 . polypeptide 887666 890143 . + . ID=LTnewLM_260028300.1:pep;Derives_from=LTnewLM_260028300.1;orthologous_to=LmjF.26.2250_mRNA;ortholog_cluster=OG0003167;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 891583 893802 1 + . ID=LTnewLM_260028400 LTnewLM_26 AUGUSTUS mRNA 891583 893802 1 + . ID=LTnewLM_260028400.1;Parent=LTnewLM_260028400 LTnewLM_26 AUGUSTUS CDS 891583 893802 1 + 0 ID=LTnewLM_260028400.1:CDS:1;Parent=LTnewLM_260028400.1 ### LTnewLM_26 . polypeptide 891583 893802 . + . ID=LTnewLM_260028400.1:pep;Derives_from=LTnewLM_260028400.1;orthologous_to=LmjF.26.2260_mRNA;ortholog_cluster=OG0003168;product=term%3DSec1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00995;Ontology_term=GO:0016192,GO:0006904 LTnewLM_26 Pfam protein_match 891844 893781 . + . Parent=LTnewLM_260028400.1:pep;Name=PF00995;signature_desc=Sec1 family;Ontology_term=GO:0006904,GO:0016192 ### LTnewLM_26 AUGUSTUS gene 894925 895728 1 + . ID=LTnewLM_260028500 LTnewLM_26 AUGUSTUS mRNA 894925 895728 1 + . ID=LTnewLM_260028500.1;Parent=LTnewLM_260028500 LTnewLM_26 AUGUSTUS CDS 894925 895728 1 + 0 ID=LTnewLM_260028500.1:CDS:1;Parent=LTnewLM_260028500.1 ### LTnewLM_26 . polypeptide 894925 895728 . + . ID=LTnewLM_260028500.1:pep;Derives_from=LTnewLM_260028500.1;orthologous_to=LmjF.26.2270_mRNA;ortholog_cluster=OG0003169;product=term%3DMitochondrial 28S ribosomal protein S34%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16053 LTnewLM_26 Pfam protein_match 895219 895440 . + . Parent=LTnewLM_260028500.1:pep;Name=PF16053;signature_desc=Mitochondrial 28S ribosomal protein S34 ### LTnewLM_26 . pseudogene 896807 898272 . + . ID=LTnewLM_260028600:pseudogene;coverage=0.994;sequence_ID=0.909;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.2280_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 896807 898272 . + . ID=LTnewLM_260028600.1;Parent=LTnewLM_260028600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 896850 898272 . + . ID=LTnewLM_260028600.1:pseudogenic_exon:1;Parent=LTnewLM_260028600.1;extra_copy_number=0 LTnewLM_26 . pseudogenic_transcript 897374 898272 . + . ID=LTnewLM_260028600.2;Parent=LTnewLM_260028600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 897433 898272 . + . ID=LTnewLM_260028600.2:pseudogenic_exon:1;Parent=LTnewLM_260028600.2;extra_copy_number=0 ### LTnewLM_26 . polypeptide 896850 898272 . + . ID=LTnewLM_260028600.1:pep;Derives_from=LTnewLM_260028600.1;product=term%3Dhypothetical protein ### LTnewLM_26 . polypeptide 897433 898272 . + . ID=LTnewLM_260028600.2:pep;Derives_from=LTnewLM_260028600.2;orthologous_to=LmjF.26.2280.1_mRNA,LmjF.26.2280.2_mRNA;ortholog_cluster=OG0000529;product=term%3DCarbon-nitrogen hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00795;Ontology_term=GO:0016810,GO:0006807 LTnewLM_26 Pfam protein_match 897451 898206 . + . Parent=LTnewLM_260028600.2:pep;Name=PF00795;signature_desc=Carbon-nitrogen hydrolase;Ontology_term=GO:0016810,GO:0006807 ### LTnewLM_26 AUGUSTUS gene 898794 900011 1 + . ID=LTnewLM_260028700 LTnewLM_26 AUGUSTUS mRNA 898794 900011 1 + . ID=LTnewLM_260028700.1;Parent=LTnewLM_260028700 LTnewLM_26 AUGUSTUS CDS 898794 900011 1 + 0 ID=LTnewLM_260028700.1:CDS:1;Parent=LTnewLM_260028700.1 ### LTnewLM_26 . polypeptide 898794 900011 . + . ID=LTnewLM_260028700.1:pep;Derives_from=LTnewLM_260028700.1;orthologous_to=LmjF.26.2290_mRNA;ortholog_cluster=OG0003170;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 900764 904489 1 + . ID=LTnewLM_260028800 LTnewLM_26 AUGUSTUS mRNA 900764 904489 1 + . ID=LTnewLM_260028800.1;Parent=LTnewLM_260028800 LTnewLM_26 AUGUSTUS CDS 900764 904489 1 + 0 ID=LTnewLM_260028800.1:CDS:1;Parent=LTnewLM_260028800.1 ### LTnewLM_26 . polypeptide 900764 904489 . + . ID=LTnewLM_260028800.1:pep;Derives_from=LTnewLM_260028800.1;orthologous_to=LmjF.26.2300_mRNA;ortholog_cluster=OG0003171;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 905726 906088 1 + . ID=LTnewLM_260028900 LTnewLM_26 AUGUSTUS mRNA 905726 906088 1 + . ID=LTnewLM_260028900.1;Parent=LTnewLM_260028900 LTnewLM_26 AUGUSTUS CDS 905726 906088 1 + 0 ID=LTnewLM_260028900.1:CDS:1;Parent=LTnewLM_260028900.1 ### LTnewLM_26 . polypeptide 905726 906088 . + . ID=LTnewLM_260028900.1:pep;Derives_from=LTnewLM_260028900.1;orthologous_to=LmjF.26.2305_mRNA;ortholog_cluster=OG0003172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 907889 908734 1 + . ID=LTnewLM_260029000 LTnewLM_26 AUGUSTUS mRNA 907889 908734 1 + . ID=LTnewLM_260029000.1;Parent=LTnewLM_260029000 LTnewLM_26 AUGUSTUS CDS 907889 908734 1 + 0 ID=LTnewLM_260029000.1:CDS:1;Parent=LTnewLM_260029000.1 ### LTnewLM_26 . polypeptide 907889 908734 . + . ID=LTnewLM_260029000.1:pep;Derives_from=LTnewLM_260029000.1;orthologous_to=LmjF.26.2310_mRNA;ortholog_cluster=OG0003173;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 909819 912014 1 + . ID=LTnewLM_260029100 LTnewLM_26 AUGUSTUS mRNA 909819 912014 1 + . ID=LTnewLM_260029100.1;Parent=LTnewLM_260029100 LTnewLM_26 AUGUSTUS CDS 909819 912014 1 + 0 ID=LTnewLM_260029100.1:CDS:1;Parent=LTnewLM_260029100.1 ### LTnewLM_26 . polypeptide 909819 912014 . + . ID=LTnewLM_260029100.1:pep;Derives_from=LTnewLM_260029100.1;orthologous_to=LmjF.26.2320_mRNA;ortholog_cluster=OG0003174;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 910278 910382 . + . Parent=LTnewLM_260029100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_26 AUGUSTUS gene 913251 913634 1 + . ID=LTnewLM_260029200 LTnewLM_26 AUGUSTUS mRNA 913251 913634 1 + . ID=LTnewLM_260029200.1;Parent=LTnewLM_260029200 LTnewLM_26 AUGUSTUS CDS 913251 913634 1 + 0 ID=LTnewLM_260029200.1:CDS:1;Parent=LTnewLM_260029200.1 ### LTnewLM_26 . polypeptide 913251 913634 . + . ID=LTnewLM_260029200.1:pep;Derives_from=LTnewLM_260029200.1;orthologous_to=LTnewLM_260029300.1,LmjF.26.2330_mRNA,LmjF.26.2340_mRNA;ortholog_cluster=OG0000188;product=term%3DRibosomal L29 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00831;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_26 Pfam protein_match 913272 913439 . + . Parent=LTnewLM_260029200.1:pep;Name=PF00831;signature_desc=Ribosomal L29 protein;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_26 AUGUSTUS gene 914886 915269 0.92 + . ID=LTnewLM_260029300 LTnewLM_26 AUGUSTUS mRNA 914886 915269 0.92 + . ID=LTnewLM_260029300.1;Parent=LTnewLM_260029300 LTnewLM_26 AUGUSTUS CDS 914886 915269 0.92 + 0 ID=LTnewLM_260029300.1:CDS:1;Parent=LTnewLM_260029300.1 ### LTnewLM_26 . polypeptide 914886 915269 . + . ID=LTnewLM_260029300.1:pep;Derives_from=LTnewLM_260029300.1;orthologous_to=LTnewLM_260029200.1,LmjF.26.2330_mRNA,LmjF.26.2340_mRNA;ortholog_cluster=OG0000188;product=term%3DRibosomal L29 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00831;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_26 Pfam protein_match 914907 915074 . + . Parent=LTnewLM_260029300.1:pep;Name=PF00831;signature_desc=Ribosomal L29 protein;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_26 Liftoff gene 916403 919057 . + . ID=LTnewLM_260029400;coverage=0.996;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2350_0 LTnewLM_26 Liftoff mRNA 916403 919057 . + . ID=LTnewLM_260029400.1;Parent=LTnewLM_260029400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 916403 919057 . + 0 ID=LTnewLM_260029400.1:CDS:1;Parent=LTnewLM_260029400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 916403 919057 . + . ID=LTnewLM_260029400.1:pep;Derives_from=LTnewLM_260029400.1;orthologous_to=LmjF.26.2350_mRNA;ortholog_cluster=OG0003175;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 920100 922172 1 + . ID=LTnewLM_260029500 LTnewLM_26 AUGUSTUS mRNA 920100 922172 1 + . ID=LTnewLM_260029500.1;Parent=LTnewLM_260029500 LTnewLM_26 AUGUSTUS CDS 920100 922172 1 + 0 ID=LTnewLM_260029500.1:CDS:1;Parent=LTnewLM_260029500.1 ### LTnewLM_26 . polypeptide 920100 922172 . + . ID=LTnewLM_260029500.1:pep;Derives_from=LTnewLM_260029500.1;orthologous_to=LmjF.26.2360_mRNA;ortholog_cluster=OG0003176;product=term%3DSec1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00995;Ontology_term=GO:0016192,GO:0006904 LTnewLM_26 Pfam protein_match 920361 922136 . + . Parent=LTnewLM_260029500.1:pep;Name=PF00995;signature_desc=Sec1 family;Ontology_term=GO:0006904,GO:0016192 ### LTnewLM_26 AUGUSTUS gene 924592 936543 1 + . ID=LTnewLM_260029600 LTnewLM_26 AUGUSTUS mRNA 924592 936543 1 + . ID=LTnewLM_260029600.1;Parent=LTnewLM_260029600 LTnewLM_26 AUGUSTUS CDS 924592 936543 1 + 0 ID=LTnewLM_260029600.1:CDS:1;Parent=LTnewLM_260029600.1 ### LTnewLM_26 . polypeptide 924592 936543 . + . ID=LTnewLM_260029600.1:pep;Derives_from=LTnewLM_260029600.1;orthologous_to=LmjF.26.2370_mRNA;ortholog_cluster=OG0003177;product=term%3DZn-finger in Ran binding protein and others/SPRY domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00641|Pfam:PF00622|Pfam:PF00632;Ontology_term=GO:0005515,GO:0008270,GO:0004842 LTnewLM_26 Pfam protein_match 932647 932724 . + . Parent=LTnewLM_260029600.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_26 Pfam protein_match 933955 934329 . + . Parent=LTnewLM_260029600.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 935602 936534 . + . Parent=LTnewLM_260029600.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_26 Liftoff gene 937647 952943 . + . ID=LTnewLM_260029700;coverage=0.999;sequence_ID=0.946;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.26.2380_0 LTnewLM_26 Liftoff mRNA 937647 952943 . + . ID=LTnewLM_260029700.1;Parent=LTnewLM_260029700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_26 Liftoff CDS 937647 952943 . + 0 ID=LTnewLM_260029700.1:CDS:1;Parent=LTnewLM_260029700.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 937647 952943 . + . ID=LTnewLM_260029700.1:pep;Derives_from=LTnewLM_260029700.1;orthologous_to=LmjF.26.2380_mRNA;ortholog_cluster=OG0003178;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 955363 958140 1 + . ID=LTnewLM_260029800 LTnewLM_26 AUGUSTUS mRNA 955363 958140 1 + . ID=LTnewLM_260029800.1;Parent=LTnewLM_260029800 LTnewLM_26 AUGUSTUS CDS 955363 958140 1 + 0 ID=LTnewLM_260029800.1:CDS:1;Parent=LTnewLM_260029800.1 ### LTnewLM_26 . polypeptide 955363 958140 . + . ID=LTnewLM_260029800.1:pep;Derives_from=LTnewLM_260029800.1;orthologous_to=LmjF.26.2390_mRNA;ortholog_cluster=OG0003179;product=term%3DPrimase zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09329;Ontology_term=GO:0005634,GO:0006260 LTnewLM_26 Pfam protein_match 956377 956484 . + . Parent=LTnewLM_260029800.1:pep;Name=PF09329;signature_desc=Primase zinc finger;Ontology_term=GO:0006260,GO:0005634 ### LTnewLM_26 AUGUSTUS gene 958626 959309 1 + . ID=LTnewLM_260029900 LTnewLM_26 AUGUSTUS mRNA 958626 959309 1 + . ID=LTnewLM_260029900.1;Parent=LTnewLM_260029900 LTnewLM_26 AUGUSTUS CDS 958626 959309 1 + 0 ID=LTnewLM_260029900.1:CDS:1;Parent=LTnewLM_260029900.1 ### LTnewLM_26 . polypeptide 958626 959309 . + . ID=LTnewLM_260029900.1:pep;Derives_from=LTnewLM_260029900.1;orthologous_to=LmjF.26.2400_mRNA;ortholog_cluster=OG0003180;product=term%3DTim17/Tim22/Tim23/Pmp24 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02466 LTnewLM_26 Pfam protein_match 958752 959063 . + . Parent=LTnewLM_260029900.1:pep;Name=PF02466;signature_desc=Tim17/Tim22/Tim23/Pmp24 family ### LTnewLM_26 AUGUSTUS gene 960049 961377 1 + . ID=LTnewLM_260030000 LTnewLM_26 AUGUSTUS mRNA 960049 961377 1 + . ID=LTnewLM_260030000.1;Parent=LTnewLM_260030000 LTnewLM_26 AUGUSTUS CDS 960049 961377 1 + 0 ID=LTnewLM_260030000.1:CDS:1;Parent=LTnewLM_260030000.1 ### LTnewLM_26 . polypeptide 960049 961377 . + . ID=LTnewLM_260030000.1:pep;Derives_from=LTnewLM_260030000.1;orthologous_to=LmjF.26.2410_mRNA;ortholog_cluster=OG0003181;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 962769 964703 1 + . ID=LTnewLM_260030100 LTnewLM_26 AUGUSTUS mRNA 962769 964703 1 + . ID=LTnewLM_260030100.1;Parent=LTnewLM_260030100 LTnewLM_26 AUGUSTUS CDS 962769 964703 1 + 0 ID=LTnewLM_260030100.1:CDS:1;Parent=LTnewLM_260030100.1 ### LTnewLM_26 . polypeptide 962769 964703 . + . ID=LTnewLM_260030100.1:pep;Derives_from=LTnewLM_260030100.1;orthologous_to=LmjF.26.2420_mRNA;ortholog_cluster=OG0003182;product=term%3DMATH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00917;Ontology_term=GO:0005515 LTnewLM_26 Pfam protein_match 962853 963119 . + . Parent=LTnewLM_260030100.1:pep;Name=PF00917;signature_desc=MATH domain;Ontology_term=GO:0005515 ### LTnewLM_26 . pseudogene 966153 967317 . + . ID=LTnewLM_260030200:pseudogene;coverage=0.987;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2430_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 966153 967317 . + . ID=LTnewLM_260030200.1;Parent=LTnewLM_260030200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 966153 967317 . + . ID=LTnewLM_260030200.1:pseudogenic_exon:1;Parent=LTnewLM_260030200.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 966153 967317 . + . ID=LTnewLM_260030200.1:pep;Derives_from=LTnewLM_260030200.1;orthologous_to=LmjF.26.2430_mRNA;ortholog_cluster=OG0007555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 968783 972676 1 + . ID=LTnewLM_260030300 LTnewLM_26 AUGUSTUS mRNA 968783 972676 1 + . ID=LTnewLM_260030300.1;Parent=LTnewLM_260030300 LTnewLM_26 AUGUSTUS CDS 968783 972676 1 + 0 ID=LTnewLM_260030300.1:CDS:1;Parent=LTnewLM_260030300.1 ### LTnewLM_26 . polypeptide 968783 972676 . + . ID=LTnewLM_260030300.1:pep;Derives_from=LTnewLM_260030300.1;orthologous_to=LmjF.26.2440_mRNA;ortholog_cluster=OG0003183;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 970433 971194 . + . Parent=LTnewLM_260030300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_26 Pfam protein_match 970433 971230 . + . Parent=LTnewLM_260030300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 973350 974015 1 + . ID=LTnewLM_260030400 LTnewLM_26 AUGUSTUS mRNA 973350 974015 1 + . ID=LTnewLM_260030400.1;Parent=LTnewLM_260030400 LTnewLM_26 AUGUSTUS CDS 973350 974015 1 + 0 ID=LTnewLM_260030400.1:CDS:1;Parent=LTnewLM_260030400.1 ### LTnewLM_26 . polypeptide 973350 974015 . + . ID=LTnewLM_260030400.1:pep;Derives_from=LTnewLM_260030400.1;orthologous_to=LmjF.26.2450_mRNA;ortholog_cluster=OG0003184;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 974688 976013 1 + . ID=LTnewLM_260030500 LTnewLM_26 AUGUSTUS mRNA 974688 976013 1 + . ID=LTnewLM_260030500.1;Parent=LTnewLM_260030500 LTnewLM_26 AUGUSTUS CDS 974688 976013 1 + 0 ID=LTnewLM_260030500.1:CDS:1;Parent=LTnewLM_260030500.1 ### LTnewLM_26 . polypeptide 974688 976013 . + . ID=LTnewLM_260030500.1:pep;Derives_from=LTnewLM_260030500.1;orthologous_to=LmjF.26.2460_mRNA;ortholog_cluster=OG0003185;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 976871 977233 1 + . ID=LTnewLM_260030600 LTnewLM_26 AUGUSTUS mRNA 976871 977233 1 + . ID=LTnewLM_260030600.1;Parent=LTnewLM_260030600 LTnewLM_26 AUGUSTUS CDS 976871 977233 1 + 0 ID=LTnewLM_260030600.1:CDS:1;Parent=LTnewLM_260030600.1 ### LTnewLM_26 . polypeptide 976871 977233 . + . ID=LTnewLM_260030600.1:pep;Derives_from=LTnewLM_260030600.1;orthologous_to=LmjF.26.2470_mRNA;ortholog_cluster=OG0003186;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 977847 978536 1 + . ID=LTnewLM_260030700 LTnewLM_26 AUGUSTUS mRNA 977847 978536 1 + . ID=LTnewLM_260030700.1;Parent=LTnewLM_260030700 LTnewLM_26 AUGUSTUS CDS 977847 978536 1 + 0 ID=LTnewLM_260030700.1:CDS:1;Parent=LTnewLM_260030700.1 ### LTnewLM_26 . polypeptide 977847 978536 . + . ID=LTnewLM_260030700.1:pep;Derives_from=LTnewLM_260030700.1;orthologous_to=LmjF.26.2480_mRNA;ortholog_cluster=OG0003187;product=term%3DCDP-alcohol phosphatidyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01066;Ontology_term=GO:0008654,GO:0016020,GO:0016780 LTnewLM_26 Pfam protein_match 977901 978224 . + . Parent=LTnewLM_260030700.1:pep;Name=PF01066;signature_desc=CDP-alcohol phosphatidyltransferase;Ontology_term=GO:0016780,GO:0008654,GO:0016020 ### LTnewLM_26 AUGUSTUS gene 981193 985923 1 + . ID=LTnewLM_260030800 LTnewLM_26 AUGUSTUS mRNA 981193 985923 1 + . ID=LTnewLM_260030800.1;Parent=LTnewLM_260030800 LTnewLM_26 AUGUSTUS CDS 981193 985923 1 + 0 ID=LTnewLM_260030800.1:CDS:1;Parent=LTnewLM_260030800.1 ### LTnewLM_26 . polypeptide 981193 985923 . + . ID=LTnewLM_260030800.1:pep;Derives_from=LTnewLM_260030800.1;orthologous_to=LmjF.26.2490_mRNA;ortholog_cluster=OG0003188;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 988456 989151 0.55 + . ID=LTnewLM_260030900 LTnewLM_26 AUGUSTUS mRNA 988456 989151 0.55 + . ID=LTnewLM_260030900.1;Parent=LTnewLM_260030900 LTnewLM_26 AUGUSTUS CDS 988456 988580 0.55 + 0 ID=LTnewLM_260030900.1:CDS:1;Parent=LTnewLM_260030900.1 LTnewLM_26 AUGUSTUS CDS 988707 989151 0.56 + 1 ID=LTnewLM_260030900.1:CDS:2;Parent=LTnewLM_260030900.1 ### LTnewLM_26 . polypeptide 988456 989151 . + . ID=LTnewLM_260030900.1:pep;Derives_from=LTnewLM_260030900.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 989376 989795 1 + . ID=LTnewLM_260031000 LTnewLM_26 AUGUSTUS mRNA 989376 989795 1 + . ID=LTnewLM_260031000.1;Parent=LTnewLM_260031000 LTnewLM_26 AUGUSTUS CDS 989376 989795 1 + 0 ID=LTnewLM_260031000.1:CDS:1;Parent=LTnewLM_260031000.1 ### LTnewLM_26 . polypeptide 989376 989795 . + . ID=LTnewLM_260031000.1:pep;Derives_from=LTnewLM_260031000.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 990663 991094 1 + . ID=LTnewLM_260031100 LTnewLM_26 AUGUSTUS mRNA 990663 991094 1 + . ID=LTnewLM_260031100.1;Parent=LTnewLM_260031100 LTnewLM_26 AUGUSTUS CDS 990663 991094 1 + 0 ID=LTnewLM_260031100.1:CDS:1;Parent=LTnewLM_260031100.1 ### LTnewLM_26 . polypeptide 990663 991094 . + . ID=LTnewLM_260031100.1:pep;Derives_from=LTnewLM_260031100.1;orthologous_to=LmjF.26.2500_mRNA;ortholog_cluster=OG0003189;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 992252 993709 1 + . ID=LTnewLM_260031200 LTnewLM_26 AUGUSTUS mRNA 992252 993709 1 + . ID=LTnewLM_260031200.1;Parent=LTnewLM_260031200 LTnewLM_26 AUGUSTUS CDS 992252 993709 1 + 0 ID=LTnewLM_260031200.1:CDS:1;Parent=LTnewLM_260031200.1 ### LTnewLM_26 . polypeptide 992252 993709 . + . ID=LTnewLM_260031200.1:pep;Derives_from=LTnewLM_260031200.1;orthologous_to=LmjF.26.2510_mRNA;ortholog_cluster=OG0003190;product=term%3DFYVE zinc finger/Protein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363|Pfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0046872,GO:0006468 LTnewLM_26 Pfam protein_match 992300 992470 . + . Parent=LTnewLM_260031200.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_26 Pfam protein_match 992681 993478 . + . Parent=LTnewLM_260031200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_26 Pfam protein_match 992681 993490 . + . Parent=LTnewLM_260031200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 995366 996832 1 + . ID=LTnewLM_260031300 LTnewLM_26 AUGUSTUS mRNA 995366 996832 1 + . ID=LTnewLM_260031300.1;Parent=LTnewLM_260031300 LTnewLM_26 AUGUSTUS CDS 995366 996832 1 + 0 ID=LTnewLM_260031300.1:CDS:1;Parent=LTnewLM_260031300.1 ### LTnewLM_26 . polypeptide 995366 996832 . + . ID=LTnewLM_260031300.1:pep;Derives_from=LTnewLM_260031300.1;orthologous_to=LmjF.26.2520_mRNA;ortholog_cluster=OG0003191;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 997915 999552 . + . ID=LTnewLM_260031400:pseudogene;coverage=0.999;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2530_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 997915 999552 . + . ID=LTnewLM_260031400.1;Parent=LTnewLM_260031400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 997915 999552 . + . ID=LTnewLM_260031400.1:pseudogenic_exon:1;Parent=LTnewLM_260031400.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 997915 999552 . + . ID=LTnewLM_260031400.1:pep;Derives_from=LTnewLM_260031400.1;orthologous_to=LmjF.26.2530_mRNA;ortholog_cluster=OG0007556;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_26 Pfam protein_match 998272 998874 . + . Parent=LTnewLM_260031400.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_26 AUGUSTUS gene 1003034 1005400 1 + . ID=LTnewLM_260031500 LTnewLM_26 AUGUSTUS mRNA 1003034 1005400 1 + . ID=LTnewLM_260031500.1;Parent=LTnewLM_260031500 LTnewLM_26 AUGUSTUS CDS 1003034 1005400 1 + 0 ID=LTnewLM_260031500.1:CDS:1;Parent=LTnewLM_260031500.1 ### LTnewLM_26 . polypeptide 1003034 1005400 . + . ID=LTnewLM_260031500.1:pep;Derives_from=LTnewLM_260031500.1;orthologous_to=LmjF.26.2540_mRNA;ortholog_cluster=OG0003192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1008006 1008290 1 + . ID=LTnewLM_260031600 LTnewLM_26 AUGUSTUS mRNA 1008006 1008290 1 + . ID=LTnewLM_260031600.1;Parent=LTnewLM_260031600 LTnewLM_26 AUGUSTUS CDS 1008006 1008290 1 + 0 ID=LTnewLM_260031600.1:CDS:1;Parent=LTnewLM_260031600.1 ### LTnewLM_26 . polypeptide 1008006 1008290 . + . ID=LTnewLM_260031600.1:pep;Derives_from=LTnewLM_260031600.1;orthologous_to=LmjF.26.2550_mRNA;ortholog_cluster=OG0003193;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 . pseudogene 1010666 1012797 . + . ID=LTnewLM_260031700:pseudogene;coverage=0.999;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.26.2560_0;has_internal_stop=true LTnewLM_26 . pseudogenic_transcript 1010666 1012797 . + . ID=LTnewLM_260031700.1;Parent=LTnewLM_260031700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_26 . pseudogenic_exon 1010666 1012797 . + . ID=LTnewLM_260031700.1:pseudogenic_exon:1;Parent=LTnewLM_260031700.1;extra_copy_number=0 ### LTnewLM_26 . polypeptide 1010666 1012797 . + . ID=LTnewLM_260031700.1:pep;Derives_from=LTnewLM_260031700.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 1013610 1014029 0.64 + . ID=LTnewLM_260031800 LTnewLM_26 AUGUSTUS mRNA 1013610 1014029 0.64 + . ID=LTnewLM_260031800.1;Parent=LTnewLM_260031800 LTnewLM_26 AUGUSTUS CDS 1013610 1014029 0.64 + 0 ID=LTnewLM_260031800.1:CDS:1;Parent=LTnewLM_260031800.1 ### LTnewLM_26 . polypeptide 1013610 1014029 . + . ID=LTnewLM_260031800.1:pep;Derives_from=LTnewLM_260031800.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_310009900.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1015582 1016880 1 + . ID=LTnewLM_260031900 LTnewLM_26 AUGUSTUS mRNA 1015582 1016880 1 + . ID=LTnewLM_260031900.1;Parent=LTnewLM_260031900 LTnewLM_26 AUGUSTUS CDS 1015582 1016880 1 + 0 ID=LTnewLM_260031900.1:CDS:1;Parent=LTnewLM_260031900.1 ### LTnewLM_26 . polypeptide 1015582 1016880 . + . ID=LTnewLM_260031900.1:pep;Derives_from=LTnewLM_260031900.1;orthologous_to=LmjF.26.2570_mRNA;ortholog_cluster=OG0003194;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_26 Pfam protein_match 1015627 1016451 . + . Parent=LTnewLM_260031900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_26 Pfam protein_match 1015630 1016463 . + . Parent=LTnewLM_260031900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_26 AUGUSTUS gene 1018317 1018772 1 + . ID=LTnewLM_260032000 LTnewLM_26 AUGUSTUS mRNA 1018317 1018772 1 + . ID=LTnewLM_260032000.1;Parent=LTnewLM_260032000 LTnewLM_26 AUGUSTUS CDS 1018317 1018772 1 + 0 ID=LTnewLM_260032000.1:CDS:1;Parent=LTnewLM_260032000.1 ### LTnewLM_26 . polypeptide 1018317 1018772 . + . ID=LTnewLM_260032000.1:pep;Derives_from=LTnewLM_260032000.1;orthologous_to=LmjF.26.2580_mRNA;ortholog_cluster=OG0003195;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1020614 1023082 1 + . ID=LTnewLM_260032100 LTnewLM_26 AUGUSTUS mRNA 1020614 1023082 1 + . ID=LTnewLM_260032100.1;Parent=LTnewLM_260032100 LTnewLM_26 AUGUSTUS CDS 1020614 1023082 1 + 0 ID=LTnewLM_260032100.1:CDS:1;Parent=LTnewLM_260032100.1 ### LTnewLM_26 . polypeptide 1020614 1023082 . + . ID=LTnewLM_260032100.1:pep;Derives_from=LTnewLM_260032100.1;orthologous_to=LmjF.26.2590_mRNA;ortholog_cluster=OG0003196;product=term%3DParaquat-inducible protein A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04403 LTnewLM_26 Pfam protein_match 1021949 1022344 . + . Parent=LTnewLM_260032100.1:pep;Name=PF04403;signature_desc=Paraquat-inducible protein A ### LTnewLM_26 AUGUSTUS gene 1024719 1025183 1 + . ID=LTnewLM_260032200 LTnewLM_26 AUGUSTUS mRNA 1024719 1025183 1 + . ID=LTnewLM_260032200.1;Parent=LTnewLM_260032200 LTnewLM_26 AUGUSTUS CDS 1024719 1025183 1 + 0 ID=LTnewLM_260032200.1:CDS:1;Parent=LTnewLM_260032200.1 ### LTnewLM_26 . polypeptide 1024719 1025183 . + . ID=LTnewLM_260032200.1:pep;Derives_from=LTnewLM_260032200.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 1026054 1028528 1 + . ID=LTnewLM_260032300 LTnewLM_26 AUGUSTUS mRNA 1026054 1028528 1 + . ID=LTnewLM_260032300.1;Parent=LTnewLM_260032300 LTnewLM_26 AUGUSTUS CDS 1026054 1028528 1 + 0 ID=LTnewLM_260032300.1:CDS:1;Parent=LTnewLM_260032300.1 ### LTnewLM_26 . polypeptide 1026054 1028528 . + . ID=LTnewLM_260032300.1:pep;Derives_from=LTnewLM_260032300.1;orthologous_to=LmjF.26.2600_mRNA;ortholog_cluster=OG0003197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1029498 1030862 1 + . ID=LTnewLM_260032400 LTnewLM_26 AUGUSTUS mRNA 1029498 1030862 1 + . ID=LTnewLM_260032400.1;Parent=LTnewLM_260032400 LTnewLM_26 AUGUSTUS CDS 1029498 1030862 1 + 0 ID=LTnewLM_260032400.1:CDS:1;Parent=LTnewLM_260032400.1 ### LTnewLM_26 . polypeptide 1029498 1030862 . + . ID=LTnewLM_260032400.1:pep;Derives_from=LTnewLM_260032400.1;orthologous_to=LmjF.26.2610_mRNA;ortholog_cluster=OG0003198;product=term%3DFAD binding domain/NAD(P)-binding Rossmann-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01494|Pfam:PF13450 LTnewLM_26 Pfam protein_match 1029501 1030151 . + . Parent=LTnewLM_260032400.1:pep;Name=PF01494;signature_desc=FAD binding domain LTnewLM_26 Pfam protein_match 1029510 1029593 . + . Parent=LTnewLM_260032400.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_26 AUGUSTUS gene 1031925 1032758 1 + . ID=LTnewLM_260032500 LTnewLM_26 AUGUSTUS mRNA 1031925 1032758 1 + . ID=LTnewLM_260032500.1;Parent=LTnewLM_260032500 LTnewLM_26 AUGUSTUS CDS 1031925 1032758 1 + 0 ID=LTnewLM_260032500.1:CDS:1;Parent=LTnewLM_260032500.1 ### LTnewLM_26 . polypeptide 1031925 1032758 . + . ID=LTnewLM_260032500.1:pep;Derives_from=LTnewLM_260032500.1;orthologous_to=LmjF.26.2620_mRNA;ortholog_cluster=OG0003199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1033440 1033682 1 + . ID=LTnewLM_260032600 LTnewLM_26 AUGUSTUS mRNA 1033440 1033682 1 + . ID=LTnewLM_260032600.1;Parent=LTnewLM_260032600 LTnewLM_26 AUGUSTUS CDS 1033440 1033682 1 + 0 ID=LTnewLM_260032600.1:CDS:1;Parent=LTnewLM_260032600.1 ### LTnewLM_26 . polypeptide 1033440 1033682 . + . ID=LTnewLM_260032600.1:pep;Derives_from=LTnewLM_260032600.1;orthologous_to=LmjF.26.2630_mRNA;ortholog_cluster=OG0003200;product=term%3DCSL zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05207 LTnewLM_26 Pfam protein_match 1033458 1033610 . + . Parent=LTnewLM_260032600.1:pep;Name=PF05207;signature_desc=CSL zinc finger ### LTnewLM_26 AUGUSTUS gene 1035116 1036270 1 + . ID=LTnewLM_260032700 LTnewLM_26 AUGUSTUS mRNA 1035116 1036270 1 + . ID=LTnewLM_260032700.1;Parent=LTnewLM_260032700 LTnewLM_26 AUGUSTUS CDS 1035116 1036270 1 + 0 ID=LTnewLM_260032700.1:CDS:1;Parent=LTnewLM_260032700.1 ### LTnewLM_26 . polypeptide 1035116 1036270 . + . ID=LTnewLM_260032700.1:pep;Derives_from=LTnewLM_260032700.1;orthologous_to=LmjF.26.2640_mRNA;ortholog_cluster=OG0003201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1038995 1039213 1 + . ID=LTnewLM_260032800 LTnewLM_26 AUGUSTUS mRNA 1038995 1039213 1 + . ID=LTnewLM_260032800.1;Parent=LTnewLM_260032800 LTnewLM_26 AUGUSTUS CDS 1038995 1039213 1 + 0 ID=LTnewLM_260032800.1:CDS:1;Parent=LTnewLM_260032800.1 ### LTnewLM_26 . polypeptide 1038995 1039213 . + . ID=LTnewLM_260032800.1:pep;Derives_from=LTnewLM_260032800.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 1040148 1041899 1 + . ID=LTnewLM_260032900 LTnewLM_26 AUGUSTUS mRNA 1040148 1041899 1 + . ID=LTnewLM_260032900.1;Parent=LTnewLM_260032900 LTnewLM_26 AUGUSTUS CDS 1040148 1041899 1 + 0 ID=LTnewLM_260032900.1:CDS:1;Parent=LTnewLM_260032900.1 ### LTnewLM_26 . polypeptide 1040148 1041899 . + . ID=LTnewLM_260032900.1:pep;Derives_from=LTnewLM_260032900.1;orthologous_to=LmjF.26.2650_mRNA;ortholog_cluster=OG0003202;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1043978 1046479 1 + . ID=LTnewLM_260033000 LTnewLM_26 AUGUSTUS mRNA 1043978 1046479 1 + . ID=LTnewLM_260033000.1;Parent=LTnewLM_260033000 LTnewLM_26 AUGUSTUS CDS 1043978 1046479 1 + 0 ID=LTnewLM_260033000.1:CDS:1;Parent=LTnewLM_260033000.1 ### LTnewLM_26 . polypeptide 1043978 1046479 . + . ID=LTnewLM_260033000.1:pep;Derives_from=LTnewLM_260033000.1;orthologous_to=LmjF.26.2660_mRNA;ortholog_cluster=OG0003203;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1047852 1051655 1 + . ID=LTnewLM_260033100 LTnewLM_26 AUGUSTUS mRNA 1047852 1051655 1 + . ID=LTnewLM_260033100.1;Parent=LTnewLM_260033100 LTnewLM_26 AUGUSTUS CDS 1047852 1051655 1 + 0 ID=LTnewLM_260033100.1:CDS:1;Parent=LTnewLM_260033100.1 ### LTnewLM_26 . polypeptide 1047852 1051655 . + . ID=LTnewLM_260033100.1:pep;Derives_from=LTnewLM_260033100.1;orthologous_to=LmjF.26.2670_mRNA;ortholog_cluster=OG0003204;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_26 Pfam protein_match 1047990 1048793 . + . Parent=LTnewLM_260033100.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_26 Pfam protein_match 1048995 1049435 . + . Parent=LTnewLM_260033100.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_26 Pfam protein_match 1049961 1050770 . + . Parent=LTnewLM_260033100.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_26 Pfam protein_match 1050981 1051427 . + . Parent=LTnewLM_260033100.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_26 AUGUSTUS gene 1055823 1056956 1 + . ID=LTnewLM_260033200 LTnewLM_26 AUGUSTUS mRNA 1055823 1056956 1 + . ID=LTnewLM_260033200.1;Parent=LTnewLM_260033200 LTnewLM_26 AUGUSTUS CDS 1055823 1056956 1 + 0 ID=LTnewLM_260033200.1:CDS:1;Parent=LTnewLM_260033200.1 ### LTnewLM_26 . polypeptide 1055823 1056956 . + . ID=LTnewLM_260033200.1:pep;Derives_from=LTnewLM_260033200.1;orthologous_to=LmjF.26.2680_mRNA;ortholog_cluster=OG0003205;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1059043 1059643 0.89 + . ID=LTnewLM_260033300 LTnewLM_26 AUGUSTUS mRNA 1059043 1059643 0.89 + . ID=LTnewLM_260033300.1;Parent=LTnewLM_260033300 LTnewLM_26 AUGUSTUS CDS 1059043 1059179 0.89 + 0 ID=LTnewLM_260033300.1:CDS:1;Parent=LTnewLM_260033300.1 LTnewLM_26 AUGUSTUS CDS 1059346 1059643 1 + 1 ID=LTnewLM_260033300.1:CDS:2;Parent=LTnewLM_260033300.1 ### LTnewLM_26 . polypeptide 1059043 1059643 . + . ID=LTnewLM_260033300.1:pep;Derives_from=LTnewLM_260033300.1;product=term%3Dhypothetical protein ### LTnewLM_26 AUGUSTUS gene 1062649 1063506 1 + . ID=LTnewLM_260033400 LTnewLM_26 AUGUSTUS mRNA 1062649 1063506 1 + . ID=LTnewLM_260033400.1;Parent=LTnewLM_260033400 LTnewLM_26 AUGUSTUS CDS 1062649 1063506 1 + 0 ID=LTnewLM_260033400.1:CDS:1;Parent=LTnewLM_260033400.1 ### LTnewLM_26 . polypeptide 1062649 1063506 . + . ID=LTnewLM_260033400.1:pep;Derives_from=LTnewLM_260033400.1;orthologous_to=LmjF.26.2690_mRNA;ortholog_cluster=OG0003206;product=term%3DType II CAAX prenyl endopeptidase Rce1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02517;Ontology_term=GO:0016020 LTnewLM_26 Pfam protein_match 1063006 1063380 . + . Parent=LTnewLM_260033400.1:pep;Name=PF02517;signature_desc=Type II CAAX prenyl endopeptidase Rce1-like;Ontology_term=GO:0016020 ### LTnewLM_26 AUGUSTUS gene 1063953 1064756 1 + . ID=LTnewLM_260033500 LTnewLM_26 AUGUSTUS mRNA 1063953 1064756 1 + . ID=LTnewLM_260033500.1;Parent=LTnewLM_260033500 LTnewLM_26 AUGUSTUS CDS 1063953 1064756 1 + 0 ID=LTnewLM_260033500.1:CDS:1;Parent=LTnewLM_260033500.1 ### LTnewLM_26 . polypeptide 1063953 1064756 . + . ID=LTnewLM_260033500.1:pep;Derives_from=LTnewLM_260033500.1;orthologous_to=LmjF.26.2700_mRNA;ortholog_cluster=OG0003207;product=term%3DGlucosamine-6-phosphate isomerases/6-phosphogluconolactonase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01182;Ontology_term=GO:0005975 LTnewLM_26 Pfam protein_match 1063995 1064690 . + . Parent=LTnewLM_260033500.1:pep;Name=PF01182;signature_desc=Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase;Ontology_term=GO:0005975 ### LTnewLM_26 AUGUSTUS gene 1065543 1066337 1 + . ID=LTnewLM_260033600 LTnewLM_26 AUGUSTUS mRNA 1065543 1066337 1 + . ID=LTnewLM_260033600.1;Parent=LTnewLM_260033600 LTnewLM_26 AUGUSTUS CDS 1065543 1066337 1 + 0 ID=LTnewLM_260033600.1:CDS:1;Parent=LTnewLM_260033600.1 ### LTnewLM_26 . polypeptide 1065543 1066337 . + . ID=LTnewLM_260033600.1:pep;Derives_from=LTnewLM_260033600.1;orthologous_to=LmjF.26.2710_mRNA;ortholog_cluster=OG0003208;product=term%3DAmino acid kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00696 LTnewLM_26 Pfam protein_match 1065567 1066229 . + . Parent=LTnewLM_260033600.1:pep;Name=PF00696;signature_desc=Amino acid kinase family ### LTnewLM_26 . polypeptide 1068809 1069104 . - . ID=LTnewLM_260033700.1:pep;Derives_from=LTnewLM_260033700.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_26 AUGUSTUS gene 1068809 1070514 0.8 - . ID=LTnewLM_260033700;fiveEndPartial=true;End_range=.,. LTnewLM_26 AUGUSTUS mRNA 1068809 1070514 0.8 - . ID=LTnewLM_260033700.1;Parent=LTnewLM_260033700 LTnewLM_26 AUGUSTUS CDS 1068809 1069104 0.8 - 2 ID=LTnewLM_260033700.1:CDS:1;Parent=LTnewLM_260033700.1 ### LTnewLM_27 . contig 1 1114889 . + . Name=LTnewLM_CTG000027 LTnewLM_27 AUGUSTUS gene 2426 3823 1 - . ID=LTnewLM_270005000 LTnewLM_27 AUGUSTUS mRNA 2426 3823 1 - . ID=LTnewLM_270005000.1;Parent=LTnewLM_270005000 LTnewLM_27 AUGUSTUS CDS 2426 3823 1 - 0 ID=LTnewLM_270005000.1:CDS:1;Parent=LTnewLM_270005000.1 ### LTnewLM_27 . polypeptide 2426 3823 . - . ID=LTnewLM_270005000.1:pep;Derives_from=LTnewLM_270005000.1;orthologous_to=LmjF.27.0010_mRNA;ortholog_cluster=OG0003209;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 4638 7727 1 - . ID=LTnewLM_270005100 LTnewLM_27 AUGUSTUS mRNA 4638 7727 1 - . ID=LTnewLM_270005100.1;Parent=LTnewLM_270005100 LTnewLM_27 AUGUSTUS CDS 4638 7727 1 - 0 ID=LTnewLM_270005100.1:CDS:1;Parent=LTnewLM_270005100.1 ### LTnewLM_27 . polypeptide 4638 7727 . - . ID=LTnewLM_270005100.1:pep;Derives_from=LTnewLM_270005100.1;orthologous_to=LmjF.27.0020_mRNA;ortholog_cluster=OG0003210;product=term%3DMeckelin (Transmembrane protein 67)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09773;Ontology_term=GO:0010826,GO:0036038,GO:0042384 LTnewLM_27 Pfam protein_match 4644 7205 . - . Parent=LTnewLM_270005100.1:pep;Name=PF09773;signature_desc=Meckelin (Transmembrane protein 67);Ontology_term=GO:0010826,GO:0042384,GO:0036038 ### LTnewLM_27 AUGUSTUS gene 8581 9591 1 - . ID=LTnewLM_270005200 LTnewLM_27 AUGUSTUS mRNA 8581 9591 1 - . ID=LTnewLM_270005200.1;Parent=LTnewLM_270005200 LTnewLM_27 AUGUSTUS CDS 8581 9591 1 - 0 ID=LTnewLM_270005200.1:CDS:1;Parent=LTnewLM_270005200.1 ### LTnewLM_27 . polypeptide 8581 9591 . - . ID=LTnewLM_270005200.1:pep;Derives_from=LTnewLM_270005200.1;orthologous_to=LmjF.27.0030_mRNA;ortholog_cluster=OG0003211;product=term%3DQueuine tRNA-ribosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01702;Ontology_term=GO:0006400,GO:0008479,GO:0008616 LTnewLM_27 Pfam protein_match 8641 9579 . - . Parent=LTnewLM_270005200.1:pep;Name=PF01702;signature_desc=Queuine tRNA-ribosyltransferase;Ontology_term=GO:0008479,GO:0006400,GO:0008616 ### LTnewLM_27 AUGUSTUS gene 10295 11578 1 - . ID=LTnewLM_270005300 LTnewLM_27 AUGUSTUS mRNA 10295 11578 1 - . ID=LTnewLM_270005300.1;Parent=LTnewLM_270005300 LTnewLM_27 AUGUSTUS CDS 10295 11578 1 - 0 ID=LTnewLM_270005300.1:CDS:1;Parent=LTnewLM_270005300.1 ### LTnewLM_27 . polypeptide 10295 11578 . - . ID=LTnewLM_270005300.1:pep;Derives_from=LTnewLM_270005300.1;orthologous_to=LmjF.27.0040_mRNA;ortholog_cluster=OG0003212;product=term%3DCAAX prenyl protease N-terminal%2C five membrane helices/Peptidase family M48%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16491|Pfam:PF01435;Ontology_term=GO:0004222,GO:0016020,GO:0006508 LTnewLM_27 Pfam protein_match 10319 10924 . - . Parent=LTnewLM_270005300.1:pep;Name=PF01435;signature_desc=Peptidase family M48;Ontology_term=GO:0004222,GO:0006508,GO:0016020 LTnewLM_27 Pfam protein_match 10952 11485 . - . Parent=LTnewLM_270005300.1:pep;Name=PF16491;signature_desc=CAAX prenyl protease N-terminal%2C five membrane helices ### LTnewLM_27 AUGUSTUS gene 12249 14612 1 - . ID=LTnewLM_270005400 LTnewLM_27 AUGUSTUS mRNA 12249 14612 1 - . ID=LTnewLM_270005400.1;Parent=LTnewLM_270005400 LTnewLM_27 AUGUSTUS CDS 12249 14612 1 - 0 ID=LTnewLM_270005400.1:CDS:1;Parent=LTnewLM_270005400.1 ### LTnewLM_27 . polypeptide 12249 14612 . - . ID=LTnewLM_270005400.1:pep;Derives_from=LTnewLM_270005400.1;orthologous_to=LmjF.27.0050_mRNA;ortholog_cluster=OG0003213;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain/Domain of unknown function (DUF4217)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271|Pfam:PF13959;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_27 Pfam protein_match 12513 12683 . - . Parent=LTnewLM_270005400.1:pep;Name=PF13959;signature_desc=Domain of unknown function (DUF4217) LTnewLM_27 Pfam protein_match 12924 13193 . - . Parent=LTnewLM_270005400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_27 Pfam protein_match 13605 14150 . - . Parent=LTnewLM_270005400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_27 Pfam protein_match 13623 14114 . - . Parent=LTnewLM_270005400.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_27 AUGUSTUS gene 15800 16012 1 - . ID=LTnewLM_270005500 LTnewLM_27 AUGUSTUS mRNA 15800 16012 1 - . ID=LTnewLM_270005500.1;Parent=LTnewLM_270005500 LTnewLM_27 AUGUSTUS CDS 15800 16012 1 - 0 ID=LTnewLM_270005500.1:CDS:1;Parent=LTnewLM_270005500.1 ### LTnewLM_27 . polypeptide 15800 16012 . - . ID=LTnewLM_270005500.1:pep;Derives_from=LTnewLM_270005500.1;orthologous_to=LmjF.27.0060_mRNA;ortholog_cluster=OG0003214;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 16464 17405 1 - . ID=LTnewLM_270005600 LTnewLM_27 AUGUSTUS mRNA 16464 17405 1 - . ID=LTnewLM_270005600.1;Parent=LTnewLM_270005600 LTnewLM_27 AUGUSTUS CDS 16464 17405 1 - 0 ID=LTnewLM_270005600.1:CDS:1;Parent=LTnewLM_270005600.1 ### LTnewLM_27 . polypeptide 16464 17405 . - . ID=LTnewLM_270005600.1:pep;Derives_from=LTnewLM_270005600.1;orthologous_to=LmjF.27.0070_mRNA;ortholog_cluster=OG0003215;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 17874 18923 1 - . ID=LTnewLM_270005700 LTnewLM_27 AUGUSTUS mRNA 17874 18923 1 - . ID=LTnewLM_270005700.1;Parent=LTnewLM_270005700 LTnewLM_27 AUGUSTUS CDS 17874 18923 1 - 0 ID=LTnewLM_270005700.1:CDS:1;Parent=LTnewLM_270005700.1 ### LTnewLM_27 . polypeptide 17874 18923 . - . ID=LTnewLM_270005700.1:pep;Derives_from=LTnewLM_270005700.1;orthologous_to=LmjF.27.0080_mRNA;ortholog_cluster=OG0003216;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 20107 21928 . - . ID=LTnewLM_270005800:pseudogene;coverage=0.999;sequence_ID=0.962;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.0090_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 20107 21928 . - . ID=LTnewLM_270005800.1;Parent=LTnewLM_270005800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 20107 21928 . - . ID=LTnewLM_270005800.1:pseudogenic_exon:1;Parent=LTnewLM_270005800.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 20107 21928 . - . ID=LTnewLM_270005800.1:pep;Derives_from=LTnewLM_270005800.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 23614 25596 1 - . ID=LTnewLM_270005900 LTnewLM_27 AUGUSTUS mRNA 23614 25596 1 - . ID=LTnewLM_270005900.1;Parent=LTnewLM_270005900 LTnewLM_27 AUGUSTUS CDS 23614 25596 1 - 0 ID=LTnewLM_270005900.1:CDS:1;Parent=LTnewLM_270005900.1 ### LTnewLM_27 . polypeptide 23614 25596 . - . ID=LTnewLM_270005900.1:pep;Derives_from=LTnewLM_270005900.1;orthologous_to=LmjF.27.0100_mRNA;ortholog_cluster=OG0003217;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_27 Pfam protein_match 24691 25587 . - . Parent=LTnewLM_270005900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 24958 25581 . - . Parent=LTnewLM_270005900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 26480 26737 1 - . ID=LTnewLM_270006000 LTnewLM_27 AUGUSTUS mRNA 26480 26737 1 - . ID=LTnewLM_270006000.1;Parent=LTnewLM_270006000 LTnewLM_27 AUGUSTUS CDS 26480 26737 1 - 0 ID=LTnewLM_270006000.1:CDS:1;Parent=LTnewLM_270006000.1 ### LTnewLM_27 . polypeptide 26480 26737 . - . ID=LTnewLM_270006000.1:pep;Derives_from=LTnewLM_270006000.1;orthologous_to=LmjF.27.0110_mRNA;ortholog_cluster=OG0003218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 28300 30201 1 - . ID=LTnewLM_270006100 LTnewLM_27 AUGUSTUS mRNA 28300 30201 1 - . ID=LTnewLM_270006100.1;Parent=LTnewLM_270006100 LTnewLM_27 AUGUSTUS CDS 28300 30201 1 - 0 ID=LTnewLM_270006100.1:CDS:1;Parent=LTnewLM_270006100.1 ### LTnewLM_27 . polypeptide 28300 30201 . - . ID=LTnewLM_270006100.1:pep;Derives_from=LTnewLM_270006100.1;orthologous_to=LmjF.27.0120_mRNA;ortholog_cluster=OG0003219;product=term%3DRING-variant domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12906;Ontology_term=GO:0008270 LTnewLM_27 Pfam protein_match 28870 29016 . - . Parent=LTnewLM_270006100.1:pep;Name=PF12906;signature_desc=RING-variant domain;Ontology_term=GO:0008270 ### LTnewLM_27 . polypeptide 31903 32250 . - . ID=LTnewLM_270006200.1:pep;Derives_from=LTnewLM_270006200.1;orthologous_to=LmjF.27.0130_mRNA;ortholog_cluster=OG0003220;product=term%3DWW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397|Pfam:PF00642;Ontology_term=GO:0046872,GO:0005515 LTnewLM_27 Pfam protein_match 31966 32025 . - . Parent=LTnewLM_270006200.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_27 Pfam protein_match 32131 32217 . - . Parent=LTnewLM_270006200.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_27 Liftoff gene 31903 32292 . - . ID=LTnewLM_270006200;coverage=1.0;sequence_ID=0.966;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.0130_0 LTnewLM_27 Liftoff mRNA 31903 32292 . - . ID=LTnewLM_270006200.1;Parent=LTnewLM_270006200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 31903 32250 . - 0 ID=LTnewLM_270006200.1:CDS:1;Parent=LTnewLM_270006200.1;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 32251 32292 . - . ID=LTnewLM_270006200:five_prime_UTR;Parent=LTnewLM_270006200.1;extra_copy_number=0 ### LTnewLM_27 AUGUSTUS gene 33145 33876 1 - . ID=LTnewLM_270006300 LTnewLM_27 AUGUSTUS mRNA 33145 33876 1 - . ID=LTnewLM_270006300.1;Parent=LTnewLM_270006300 LTnewLM_27 AUGUSTUS CDS 33145 33876 1 - 0 ID=LTnewLM_270006300.1:CDS:1;Parent=LTnewLM_270006300.1 ### LTnewLM_27 . polypeptide 33145 33876 . - . ID=LTnewLM_270006300.1:pep;Derives_from=LTnewLM_270006300.1;orthologous_to=LmjF.27.0140_mRNA;ortholog_cluster=OG0003221;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 35701 36357 1 - . ID=LTnewLM_270006400 LTnewLM_27 AUGUSTUS mRNA 35701 36357 1 - . ID=LTnewLM_270006400.1;Parent=LTnewLM_270006400 LTnewLM_27 AUGUSTUS CDS 35701 36357 1 - 0 ID=LTnewLM_270006400.1:CDS:1;Parent=LTnewLM_270006400.1 ### LTnewLM_27 . polypeptide 35701 36357 . - . ID=LTnewLM_270006400.1:pep;Derives_from=LTnewLM_270006400.1;orthologous_to=LmjF.27.0150_mRNA;ortholog_cluster=OG0003222;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 37731 38726 1 - . ID=LTnewLM_270006500 LTnewLM_27 AUGUSTUS mRNA 37731 38726 1 - . ID=LTnewLM_270006500.1;Parent=LTnewLM_270006500 LTnewLM_27 AUGUSTUS CDS 37731 38726 1 - 0 ID=LTnewLM_270006500.1:CDS:1;Parent=LTnewLM_270006500.1 ### LTnewLM_27 . polypeptide 37731 38726 . - . ID=LTnewLM_270006500.1:pep;Derives_from=LTnewLM_270006500.1;orthologous_to=LmjF.27.0160_mRNA;ortholog_cluster=OG0003223;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 37935 38486 . - . Parent=LTnewLM_270006500.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 40133 41545 1 - . ID=LTnewLM_270006600 LTnewLM_27 AUGUSTUS mRNA 40133 41545 1 - . ID=LTnewLM_270006600.1;Parent=LTnewLM_270006600 LTnewLM_27 AUGUSTUS CDS 40133 41545 1 - 0 ID=LTnewLM_270006600.1:CDS:1;Parent=LTnewLM_270006600.1 ### LTnewLM_27 . polypeptide 40133 41545 . - . ID=LTnewLM_270006600.1:pep;Derives_from=LTnewLM_270006600.1;orthologous_to=LmjF.27.0170_mRNA;ortholog_cluster=OG0003224;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 42387 42926 1 - . ID=LTnewLM_270006700 LTnewLM_27 AUGUSTUS mRNA 42387 42926 1 - . ID=LTnewLM_270006700.1;Parent=LTnewLM_270006700 LTnewLM_27 AUGUSTUS CDS 42387 42926 1 - 0 ID=LTnewLM_270006700.1:CDS:1;Parent=LTnewLM_270006700.1 ### LTnewLM_27 . polypeptide 42387 42926 . - . ID=LTnewLM_270006700.1:pep;Derives_from=LTnewLM_270006700.1;orthologous_to=LmjF.27.0180_mRNA;ortholog_cluster=OG0003225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 43976 44692 1 - . ID=LTnewLM_270006800 LTnewLM_27 AUGUSTUS mRNA 43976 44692 1 - . ID=LTnewLM_270006800.1;Parent=LTnewLM_270006800 LTnewLM_27 AUGUSTUS CDS 43976 44692 1 - 0 ID=LTnewLM_270006800.1:CDS:1;Parent=LTnewLM_270006800.1 ### LTnewLM_27 . polypeptide 43976 44692 . - . ID=LTnewLM_270006800.1:pep;Derives_from=LTnewLM_270006800.1;orthologous_to=LmjF.27.0190_mRNA;ortholog_cluster=OG0003226;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_27 Pfam protein_match 44048 44602 . - . Parent=LTnewLM_270006800.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 LTnewLM_27 Pfam protein_match 44606 44671 . - . Parent=LTnewLM_270006800.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 ### LTnewLM_27 AUGUSTUS gene 45555 46673 1 - . ID=LTnewLM_270006900 LTnewLM_27 AUGUSTUS mRNA 45555 46673 1 - . ID=LTnewLM_270006900.1;Parent=LTnewLM_270006900 LTnewLM_27 AUGUSTUS CDS 45555 46673 1 - 0 ID=LTnewLM_270006900.1:CDS:1;Parent=LTnewLM_270006900.1 ### LTnewLM_27 . polypeptide 45555 46673 . - . ID=LTnewLM_270006900.1:pep;Derives_from=LTnewLM_270006900.1;orthologous_to=LmjF.27.0200_mRNA;ortholog_cluster=OG0003227;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 47416 48285 1 - . ID=LTnewLM_270007000 LTnewLM_27 AUGUSTUS mRNA 47416 48285 1 - . ID=LTnewLM_270007000.1;Parent=LTnewLM_270007000 LTnewLM_27 AUGUSTUS CDS 47416 48285 1 - 0 ID=LTnewLM_270007000.1:CDS:1;Parent=LTnewLM_270007000.1 ### LTnewLM_27 . polypeptide 47416 48285 . - . ID=LTnewLM_270007000.1:pep;Derives_from=LTnewLM_270007000.1;orthologous_to=LmjF.27.0210_mRNA;ortholog_cluster=OG0003228;product=term%3DVIT family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01988 LTnewLM_27 Pfam protein_match 47479 48117 . - . Parent=LTnewLM_270007000.1:pep;Name=PF01988;signature_desc=VIT family ### LTnewLM_27 AUGUSTUS gene 49898 50842 1 - . ID=LTnewLM_270007100 LTnewLM_27 AUGUSTUS mRNA 49898 50842 1 - . ID=LTnewLM_270007100.1;Parent=LTnewLM_270007100 LTnewLM_27 AUGUSTUS CDS 49898 50842 1 - 0 ID=LTnewLM_270007100.1:CDS:1;Parent=LTnewLM_270007100.1 ### LTnewLM_27 . polypeptide 49898 50842 . - . ID=LTnewLM_270007100.1:pep;Derives_from=LTnewLM_270007100.1;orthologous_to=LmjF.27.0220_mRNA;ortholog_cluster=OG0003229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 51678 52241 1 - . ID=LTnewLM_270007200 LTnewLM_27 AUGUSTUS mRNA 51678 52241 1 - . ID=LTnewLM_270007200.1;Parent=LTnewLM_270007200 LTnewLM_27 AUGUSTUS CDS 51678 52241 1 - 0 ID=LTnewLM_270007200.1:CDS:1;Parent=LTnewLM_270007200.1 ### LTnewLM_27 . polypeptide 51678 52241 . - . ID=LTnewLM_270007200.1:pep;Derives_from=LTnewLM_270007200.1;orthologous_to=LmjF.27.0230_mRNA;ortholog_cluster=OG0003230;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 61089 62276 1 - . ID=LTnewLM_270007300 LTnewLM_27 AUGUSTUS mRNA 61089 62276 1 - . ID=LTnewLM_270007300.1;Parent=LTnewLM_270007300 LTnewLM_27 AUGUSTUS CDS 61089 62276 1 - 0 ID=LTnewLM_270007300.1:CDS:1;Parent=LTnewLM_270007300.1 ### LTnewLM_27 . polypeptide 61089 62276 . - . ID=LTnewLM_270007300.1:pep;Derives_from=LTnewLM_270007300.1;orthologous_to=LmjF.27.0250_mRNA;ortholog_cluster=OG0003231;product=term%3DXPG N-terminal domain/XPG I-region%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00752|Pfam:PF00867;Ontology_term=GO:0004518,GO:0006281 LTnewLM_27 Pfam protein_match 61569 61820 . - . Parent=LTnewLM_270007300.1:pep;Name=PF00867;signature_desc=XPG I-region;Ontology_term=GO:0004518 LTnewLM_27 Pfam protein_match 61950 62276 . - . Parent=LTnewLM_270007300.1:pep;Name=PF00752;signature_desc=XPG N-terminal domain;Ontology_term=GO:0004518,GO:0006281 ### LTnewLM_27 AUGUSTUS gene 62920 63906 1 - . ID=LTnewLM_270007400 LTnewLM_27 AUGUSTUS mRNA 62920 63906 1 - . ID=LTnewLM_270007400.1;Parent=LTnewLM_270007400 LTnewLM_27 AUGUSTUS CDS 62920 63906 1 - 0 ID=LTnewLM_270007400.1:CDS:1;Parent=LTnewLM_270007400.1 ### LTnewLM_27 . polypeptide 62920 63906 . - . ID=LTnewLM_270007400.1:pep;Derives_from=LTnewLM_270007400.1;orthologous_to=LmjF.27.0260_mRNA;ortholog_cluster=OG0003232;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 66108 69425 1 - . ID=LTnewLM_270007500 LTnewLM_27 AUGUSTUS mRNA 66108 69425 1 - . ID=LTnewLM_270007500.1;Parent=LTnewLM_270007500 LTnewLM_27 AUGUSTUS CDS 66108 69425 1 - 0 ID=LTnewLM_270007500.1:CDS:1;Parent=LTnewLM_270007500.1 ### LTnewLM_27 . polypeptide 66108 69425 . - . ID=LTnewLM_270007500.1:pep;Derives_from=LTnewLM_270007500.1;orthologous_to=LmjF.27.0270_mRNA;ortholog_cluster=OG0003233;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 70274 70726 1 - . ID=LTnewLM_270007600 LTnewLM_27 AUGUSTUS mRNA 70274 70726 1 - . ID=LTnewLM_270007600.1;Parent=LTnewLM_270007600 LTnewLM_27 AUGUSTUS CDS 70274 70726 1 - 0 ID=LTnewLM_270007600.1:CDS:1;Parent=LTnewLM_270007600.1 ### LTnewLM_27 . polypeptide 70274 70726 . - . ID=LTnewLM_270007600.1:pep;Derives_from=LTnewLM_270007600.1;orthologous_to=LmjF.27.0290_mRNA;ortholog_cluster=OG0003234;product=term%3DPhosphopantetheine attachment site%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00550 LTnewLM_27 Pfam protein_match 70301 70498 . - . Parent=LTnewLM_270007600.1:pep;Name=PF00550;signature_desc=Phosphopantetheine attachment site ### LTnewLM_27 AUGUSTUS gene 74338 76509 1 + . ID=LTnewLM_270007700 LTnewLM_27 AUGUSTUS mRNA 74338 76509 1 + . ID=LTnewLM_270007700.1;Parent=LTnewLM_270007700 LTnewLM_27 AUGUSTUS CDS 74338 76509 1 + 0 ID=LTnewLM_270007700.1:CDS:1;Parent=LTnewLM_270007700.1 ### LTnewLM_27 . polypeptide 74338 76509 . + . ID=LTnewLM_270007700.1:pep;Derives_from=LTnewLM_270007700.1;orthologous_to=LmjF.27.0300_mRNA;ortholog_cluster=OG0003235;product=term%3DMethylmalonyl-CoA mutase/B12 binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01642|Pfam:PF02310;Ontology_term=GO:0016866,GO:0046872,GO:0031419,GO:0008152 LTnewLM_27 Pfam protein_match 74452 75975 . + . Parent=LTnewLM_270007700.1:pep;Name=PF01642;signature_desc=Methylmalonyl-CoA mutase;Ontology_term=GO:0016866,GO:0031419,GO:0008152 LTnewLM_27 Pfam protein_match 76120 76449 . + . Parent=LTnewLM_270007700.1:pep;Name=PF02310;signature_desc=B12 binding domain;Ontology_term=GO:0031419,GO:0046872 ### LTnewLM_27 AUGUSTUS gene 78477 82163 1 + . ID=LTnewLM_270007800 LTnewLM_27 AUGUSTUS mRNA 78477 82163 1 + . ID=LTnewLM_270007800.1;Parent=LTnewLM_270007800 LTnewLM_27 AUGUSTUS CDS 78477 82163 1 + 0 ID=LTnewLM_270007800.1:CDS:1;Parent=LTnewLM_270007800.1 ### LTnewLM_27 . polypeptide 78477 82163 . + . ID=LTnewLM_270007800.1:pep;Derives_from=LTnewLM_270007800.1;orthologous_to=LmjF.27.0310_mRNA;ortholog_cluster=OG0003236;product=term%3DTATA-binding protein interacting (TIP20)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08623 LTnewLM_27 Pfam protein_match 81624 81983 . + . Parent=LTnewLM_270007800.1:pep;Name=PF08623;signature_desc=TATA-binding protein interacting (TIP20) ### LTnewLM_27 AUGUSTUS gene 83668 85152 1 + . ID=LTnewLM_270007900 LTnewLM_27 AUGUSTUS mRNA 83668 85152 1 + . ID=LTnewLM_270007900.1;Parent=LTnewLM_270007900 LTnewLM_27 AUGUSTUS CDS 83668 85152 1 + 0 ID=LTnewLM_270007900.1:CDS:1;Parent=LTnewLM_270007900.1 ### LTnewLM_27 . polypeptide 83668 85152 . + . ID=LTnewLM_270007900.1:pep;Derives_from=LTnewLM_270007900.1;orthologous_to=LmjF.27.0320_mRNA;ortholog_cluster=OG0003237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 86028 88238 1 + . ID=LTnewLM_270008000 LTnewLM_27 AUGUSTUS mRNA 86028 88238 1 + . ID=LTnewLM_270008000.1;Parent=LTnewLM_270008000 LTnewLM_27 AUGUSTUS CDS 86028 88238 1 + 0 ID=LTnewLM_270008000.1:CDS:1;Parent=LTnewLM_270008000.1 ### LTnewLM_27 . polypeptide 86028 88238 . + . ID=LTnewLM_270008000.1:pep;Derives_from=LTnewLM_270008000.1;orthologous_to=LmjF.27.0330_mRNA;ortholog_cluster=OG0003238;product=term%3DTranslin-associated factor X-interacting N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15739 LTnewLM_27 Pfam protein_match 86394 86714 . + . Parent=LTnewLM_270008000.1:pep;Name=PF15739;signature_desc=Translin-associated factor X-interacting N-terminus ### LTnewLM_27 Liftoff gene 89074 90363 . + . ID=LTnewLM_270008100;coverage=1.0;sequence_ID=0.953;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.0340_0 LTnewLM_27 Liftoff mRNA 89074 90363 . + . ID=LTnewLM_270008100.1;Parent=LTnewLM_270008100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 89074 90363 . + 0 ID=LTnewLM_270008100.1:CDS:1;Parent=LTnewLM_270008100.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 89074 90363 . + . ID=LTnewLM_270008100.1:pep;Derives_from=LTnewLM_270008100.1;orthologous_to=LmjF.27.0340_mRNA;ortholog_cluster=OG0003239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 93655 95142 1 + . ID=LTnewLM_270008200 LTnewLM_27 AUGUSTUS mRNA 93655 95142 1 + . ID=LTnewLM_270008200.1;Parent=LTnewLM_270008200 LTnewLM_27 AUGUSTUS CDS 93655 95142 1 + 0 ID=LTnewLM_270008200.1:CDS:1;Parent=LTnewLM_270008200.1 ### LTnewLM_27 . polypeptide 93655 95142 . + . ID=LTnewLM_270008200.1:pep;Derives_from=LTnewLM_270008200.1;orthologous_to=LmjF.27.0350_mRNA;ortholog_cluster=OG0003240;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_27 Pfam protein_match 94792 94992 . + . Parent=LTnewLM_270008200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_27 AUGUSTUS gene 98448 100418 1 + . ID=LTnewLM_270008300 LTnewLM_27 AUGUSTUS mRNA 98448 100418 1 + . ID=LTnewLM_270008300.1;Parent=LTnewLM_270008300 LTnewLM_27 AUGUSTUS CDS 98448 100418 1 + 0 ID=LTnewLM_270008300.1:CDS:1;Parent=LTnewLM_270008300.1 ### LTnewLM_27 . polypeptide 98448 100418 . + . ID=LTnewLM_270008300.1:pep;Derives_from=LTnewLM_270008300.1;orthologous_to=LmjF.27.0360_mRNA;ortholog_cluster=OG0003241;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 99735 100124 . + . Parent=LTnewLM_270008300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_27 AUGUSTUS gene 101271 101855 1 + . ID=LTnewLM_270008400 LTnewLM_27 AUGUSTUS mRNA 101271 101855 1 + . ID=LTnewLM_270008400.1;Parent=LTnewLM_270008400 LTnewLM_27 AUGUSTUS CDS 101271 101855 1 + 0 ID=LTnewLM_270008400.1:CDS:1;Parent=LTnewLM_270008400.1 ### LTnewLM_27 . polypeptide 101271 101855 . + . ID=LTnewLM_270008400.1:pep;Derives_from=LTnewLM_270008400.1;orthologous_to=LmjF.27.0370_mRNA;ortholog_cluster=OG0003242;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 103174 107844 1 + . ID=LTnewLM_270008500 LTnewLM_27 AUGUSTUS mRNA 103174 107844 1 + . ID=LTnewLM_270008500.1;Parent=LTnewLM_270008500 LTnewLM_27 AUGUSTUS CDS 103174 107844 1 + 0 ID=LTnewLM_270008500.1:CDS:1;Parent=LTnewLM_270008500.1 ### LTnewLM_27 . polypeptide 103174 107844 . + . ID=LTnewLM_270008500.1:pep;Derives_from=LTnewLM_270008500.1;orthologous_to=LmjF.27.0380_mRNA;ortholog_cluster=OG0003243;product=term%3DNucleoporin autopeptidase/Nuclear protein 96%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04096|Pfam:PF12110;Ontology_term=GO:0006810,GO:0005643 LTnewLM_27 Pfam protein_match 105391 105651 . + . Parent=LTnewLM_270008500.1:pep;Name=PF04096;signature_desc=Nucleoporin autopeptidase;Ontology_term=GO:0006810,GO:0005643 LTnewLM_27 Pfam protein_match 106834 107727 . + . Parent=LTnewLM_270008500.1:pep;Name=PF12110;signature_desc=Nuclear protein 96 ### LTnewLM_27 . pseudogene 108961 111588 . + . ID=LTnewLM_270008600:pseudogene;coverage=0.997;sequence_ID=0.958;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.0390_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 108961 111588 . + . ID=LTnewLM_270008600.1;Parent=LTnewLM_270008600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 108961 111588 . + . ID=LTnewLM_270008600.1:pseudogenic_exon:1;Parent=LTnewLM_270008600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 108961 111588 . + . ID=LTnewLM_270008600.1:pep;Derives_from=LTnewLM_270008600.1;orthologous_to=LmjF.27.0390_mRNA;ortholog_cluster=OG0007557;product=term%3DAutophagy protein ATG9%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04109 LTnewLM_27 Pfam protein_match 109948 110934 . + . Parent=LTnewLM_270008600.1:pep;Name=PF04109;signature_desc=Autophagy protein ATG9 ### LTnewLM_27 AUGUSTUS gene 112555 112977 1 + . ID=LTnewLM_270008700 LTnewLM_27 AUGUSTUS mRNA 112555 112977 1 + . ID=LTnewLM_270008700.1;Parent=LTnewLM_270008700 LTnewLM_27 AUGUSTUS CDS 112555 112977 1 + 0 ID=LTnewLM_270008700.1:CDS:1;Parent=LTnewLM_270008700.1 ### LTnewLM_27 . polypeptide 112555 112977 . + . ID=LTnewLM_270008700.1:pep;Derives_from=LTnewLM_270008700.1;orthologous_to=LmjF.27.0400_mRNA;ortholog_cluster=OG0003244;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 114175 115308 1 + . ID=LTnewLM_270008800 LTnewLM_27 AUGUSTUS mRNA 114175 115308 1 + . ID=LTnewLM_270008800.1;Parent=LTnewLM_270008800 LTnewLM_27 AUGUSTUS CDS 114175 115308 1 + 0 ID=LTnewLM_270008800.1:CDS:1;Parent=LTnewLM_270008800.1 ### LTnewLM_27 . polypeptide 114175 115308 . + . ID=LTnewLM_270008800.1:pep;Derives_from=LTnewLM_270008800.1;orthologous_to=LmjF.27.0410_mRNA;ortholog_cluster=OG0003245;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_27 Pfam protein_match 114388 114570 . + . Parent=LTnewLM_270008800.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_27 AUGUSTUS gene 116578 117567 1 + . ID=LTnewLM_270008900 LTnewLM_27 AUGUSTUS mRNA 116578 117567 1 + . ID=LTnewLM_270008900.1;Parent=LTnewLM_270008900 LTnewLM_27 AUGUSTUS CDS 116578 117567 1 + 0 ID=LTnewLM_270008900.1:CDS:1;Parent=LTnewLM_270008900.1 ### LTnewLM_27 . polypeptide 116578 117567 . + . ID=LTnewLM_270008900.1:pep;Derives_from=LTnewLM_270008900.1;orthologous_to=LmjF.27.0420_mRNA;ortholog_cluster=OG0003246;product=term%3DpfkB family carbohydrate kinase/Phosphomethylpyrimidine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294|Pfam:PF08543 LTnewLM_27 Pfam protein_match 116626 117534 . + . Parent=LTnewLM_270008900.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase LTnewLM_27 Pfam protein_match 117145 117492 . + . Parent=LTnewLM_270008900.1:pep;Name=PF08543;signature_desc=Phosphomethylpyrimidine kinase ### LTnewLM_27 AUGUSTUS gene 119598 121430 1 + . ID=LTnewLM_270009000 LTnewLM_27 AUGUSTUS mRNA 119598 121430 1 + . ID=LTnewLM_270009000.1;Parent=LTnewLM_270009000 LTnewLM_27 AUGUSTUS CDS 119598 121430 1 + 0 ID=LTnewLM_270009000.1:CDS:1;Parent=LTnewLM_270009000.1 ### LTnewLM_27 . polypeptide 119598 121430 . + . ID=LTnewLM_270009000.1:pep;Derives_from=LTnewLM_270009000.1;orthologous_to=LmjF.27.0430_mRNA;ortholog_cluster=OG0003247;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 122842 124512 1 + . ID=LTnewLM_270009100 LTnewLM_27 AUGUSTUS mRNA 122842 124512 1 + . ID=LTnewLM_270009100.1;Parent=LTnewLM_270009100 LTnewLM_27 AUGUSTUS CDS 122842 124512 1 + 0 ID=LTnewLM_270009100.1:CDS:1;Parent=LTnewLM_270009100.1 ### LTnewLM_27 . polypeptide 122842 124512 . + . ID=LTnewLM_270009100.1:pep;Derives_from=LTnewLM_270009100.1;orthologous_to=LmjF.27.0440_mRNA;ortholog_cluster=OG0003248;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 126148 127140 1 + . ID=LTnewLM_270009200 LTnewLM_27 AUGUSTUS mRNA 126148 127140 1 + . ID=LTnewLM_270009200.1;Parent=LTnewLM_270009200 LTnewLM_27 AUGUSTUS CDS 126148 127140 1 + 0 ID=LTnewLM_270009200.1:CDS:1;Parent=LTnewLM_270009200.1 ### LTnewLM_27 . polypeptide 126148 127140 . + . ID=LTnewLM_270009200.1:pep;Derives_from=LTnewLM_270009200.1;orthologous_to=LmjF.27.0450_mRNA;ortholog_cluster=OG0003249;product=term%3DBrix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04427 LTnewLM_27 Pfam protein_match 126556 127038 . + . Parent=LTnewLM_270009200.1:pep;Name=PF04427;signature_desc=Brix domain ### LTnewLM_27 AUGUSTUS gene 128127 129989 1 + . ID=LTnewLM_270009300 LTnewLM_27 AUGUSTUS mRNA 128127 129989 1 + . ID=LTnewLM_270009300.1;Parent=LTnewLM_270009300 LTnewLM_27 AUGUSTUS CDS 128127 129989 1 + 0 ID=LTnewLM_270009300.1:CDS:1;Parent=LTnewLM_270009300.1 ### LTnewLM_27 . polypeptide 128127 129989 . + . ID=LTnewLM_270009300.1:pep;Derives_from=LTnewLM_270009300.1;orthologous_to=LmjF.27.0460_mRNA;ortholog_cluster=OG0003250;product=term%3DVasohibin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14822;Ontology_term=GO:0045765,GO:0005737 LTnewLM_27 Pfam protein_match 128172 128801 . + . Parent=LTnewLM_270009300.1:pep;Name=PF14822;signature_desc=Vasohibin;Ontology_term=GO:0045765,GO:0005737 ### LTnewLM_27 AUGUSTUS gene 132421 134487 1 + . ID=LTnewLM_270009400 LTnewLM_27 AUGUSTUS mRNA 132421 134487 1 + . ID=LTnewLM_270009400.1;Parent=LTnewLM_270009400 LTnewLM_27 AUGUSTUS CDS 132421 134487 1 + 0 ID=LTnewLM_270009400.1:CDS:1;Parent=LTnewLM_270009400.1 ### LTnewLM_27 . polypeptide 132421 134487 . + . ID=LTnewLM_270009400.1:pep;Derives_from=LTnewLM_270009400.1;orthologous_to=LmjF.27.0470_mRNA;ortholog_cluster=OG0003251;product=term%3DABC transporter transmembrane region 2/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06472|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_27 Pfam protein_match 132646 133431 . + . Parent=LTnewLM_270009400.1:pep;Name=PF06472;signature_desc=ABC transporter transmembrane region 2;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_27 Pfam protein_match 133801 134277 . + . Parent=LTnewLM_270009400.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_27 AUGUSTUS gene 136714 137097 0.99 + . ID=LTnewLM_270009500 LTnewLM_27 AUGUSTUS mRNA 136714 137097 0.99 + . ID=LTnewLM_270009500.1;Parent=LTnewLM_270009500 LTnewLM_27 AUGUSTUS CDS 136714 137097 0.99 + 0 ID=LTnewLM_270009500.1:CDS:1;Parent=LTnewLM_270009500.1 ### LTnewLM_27 . polypeptide 136714 137097 . + . ID=LTnewLM_270009500.1:pep;Derives_from=LTnewLM_270009500.1;product=term%3Dhypothetical protein ### LTnewLM_27 . pseudogene 138955 140740 3.06e+03 + . ID=LTnewLM_270009600:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;Target=LmjF.27.0480:mRNA 1 595;original_prot_length=596 LTnewLM_27 . pseudogenic_transcript 138955 140740 . + . ID=LTnewLM_270009600.1;Parent=LTnewLM_270009600:pseudogene LTnewLM_27 . pseudogenic_exon 138955 139353 . + . ID=LTnewLM_270009600.1:pseudogenic_exon:1;Parent=LTnewLM_270009600.1 LTnewLM_27 . pseudogenic_exon 139355 140740 . + . ID=LTnewLM_270009600.1:pseudogenic_exon:2;Parent=LTnewLM_270009600.1 ### LTnewLM_27 . polypeptide 138955 140740 . + . ID=LTnewLM_270009600.1:pep;Derives_from=LTnewLM_270009600.1;orthologous_to=LmjF.27.0480_mRNA;ortholog_cluster=OG0007558;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 143273 160608 0.84 + . ID=LTnewLM_270009700 LTnewLM_27 AUGUSTUS mRNA 143273 160608 0.84 + . ID=LTnewLM_270009700.1;Parent=LTnewLM_270009700 LTnewLM_27 AUGUSTUS CDS 143273 149967 1 + 0 ID=LTnewLM_270009700.1:CDS:1;Parent=LTnewLM_270009700.1 LTnewLM_27 AUGUSTUS CDS 150030 160608 0.84 + 1 ID=LTnewLM_270009700.1:CDS:2;Parent=LTnewLM_270009700.1 ### LTnewLM_27 . polypeptide 143273 160608 . + . ID=LTnewLM_270009700.1:pep;Derives_from=LTnewLM_270009700.1;orthologous_to=LmjF.27.0490_mRNA;ortholog_cluster=OG0003252;product=term%3DCalpain family cysteine protease/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648|Pfam:PF01067;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_27 Pfam protein_match 143402 144172 . + . Parent=LTnewLM_270009700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 144212 144589 . + . Parent=LTnewLM_270009700.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III LTnewLM_27 Pfam protein_match 145223 146008 . + . Parent=LTnewLM_270009700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 158699 159523 . + . Parent=LTnewLM_270009700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_27 Liftoff gene 167460 185966 . + . ID=LTnewLM_270009800;coverage=1.0;sequence_ID=0.964;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.0500_0 LTnewLM_27 Liftoff mRNA 167460 185966 . + . ID=LTnewLM_270009800.1;Parent=LTnewLM_270009800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 167460 185966 . + 0 ID=LTnewLM_270009800.1:CDS:1;Parent=LTnewLM_270009800.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 167460 185966 . + . ID=LTnewLM_270009800.1:pep;Derives_from=LTnewLM_270009800.1;orthologous_to=LTnewLM_270009900.1,LmjF.27.0500_mRNA,LmjF.27.0510_mRNA;ortholog_cluster=OG0000189;product=term%3DCalpain family cysteine protease/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648|Pfam:PF01067;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_27 Pfam protein_match 167517 168350 . + . Parent=LTnewLM_270009800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 168390 168773 . + . Parent=LTnewLM_270009800.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III LTnewLM_27 Pfam protein_match 169434 170192 . + . Parent=LTnewLM_270009800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 184074 184907 . + . Parent=LTnewLM_270009800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 184941 185318 . + . Parent=LTnewLM_270009800.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III ### LTnewLM_27 . pseudogene 196738 214853 . + . ID=LTnewLM_270009900:pseudogene;coverage=0.986;sequence_ID=0.819;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.0510_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 196738 214853 . + . ID=LTnewLM_270009900.1;Parent=LTnewLM_270009900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 196738 214853 . + . ID=LTnewLM_270009900.1:pseudogenic_exon:1;Parent=LTnewLM_270009900.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 196738 214853 . + . ID=LTnewLM_270009900.1:pep;Derives_from=LTnewLM_270009900.1;orthologous_to=LTnewLM_270009800.1,LmjF.27.0500_mRNA,LmjF.27.0510_mRNA;ortholog_cluster=OG0000189;product=term%3DCalpain family cysteine protease/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648|Pfam:PF01067;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_27 Pfam protein_match 196822 197634 . + . Parent=LTnewLM_270009900.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_27 Pfam protein_match 197677 198057 . + . Parent=LTnewLM_270009900.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III LTnewLM_27 Pfam protein_match 198718 199476 . + . Parent=LTnewLM_270009900.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_27 AUGUSTUS gene 217981 219057 1 + . ID=LTnewLM_270010000 LTnewLM_27 AUGUSTUS mRNA 217981 219057 1 + . ID=LTnewLM_270010000.1;Parent=LTnewLM_270010000 LTnewLM_27 AUGUSTUS CDS 217981 219057 1 + 0 ID=LTnewLM_270010000.1:CDS:1;Parent=LTnewLM_270010000.1 ### LTnewLM_27 . polypeptide 217981 219057 . + . ID=LTnewLM_270010000.1:pep;Derives_from=LTnewLM_270010000.1;orthologous_to=LmjF.27.0520_mRNA;ortholog_cluster=OG0003253;product=term%3DRadial spoke protein 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06098 LTnewLM_27 Pfam protein_match 218125 218991 . + . Parent=LTnewLM_270010000.1:pep;Name=PF06098;signature_desc=Radial spoke protein 3 ### LTnewLM_27 AUGUSTUS gene 220361 222145 1 + . ID=LTnewLM_270010100 LTnewLM_27 AUGUSTUS mRNA 220361 222145 1 + . ID=LTnewLM_270010100.1;Parent=LTnewLM_270010100 LTnewLM_27 AUGUSTUS CDS 220361 222145 1 + 0 ID=LTnewLM_270010100.1:CDS:1;Parent=LTnewLM_270010100.1 ### LTnewLM_27 . polypeptide 220361 222145 . + . ID=LTnewLM_270010100.1:pep;Derives_from=LTnewLM_270010100.1;orthologous_to=LmjF.27.0530_mRNA;ortholog_cluster=OG0003254;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 223002 223631 1 + . ID=LTnewLM_270010200 LTnewLM_27 AUGUSTUS mRNA 223002 223631 1 + . ID=LTnewLM_270010200.1;Parent=LTnewLM_270010200 LTnewLM_27 AUGUSTUS CDS 223002 223631 1 + 0 ID=LTnewLM_270010200.1:CDS:1;Parent=LTnewLM_270010200.1 ### LTnewLM_27 . polypeptide 223002 223631 . + . ID=LTnewLM_270010200.1:pep;Derives_from=LTnewLM_270010200.1;orthologous_to=LmjF.27.0540_mRNA;ortholog_cluster=OG0003255;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_27 Pfam protein_match 223224 223607 . + . Parent=LTnewLM_270010200.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_27 AUGUSTUS gene 225176 226258 1 + . ID=LTnewLM_270010300 LTnewLM_27 AUGUSTUS mRNA 225176 226258 1 + . ID=LTnewLM_270010300.1;Parent=LTnewLM_270010300 LTnewLM_27 AUGUSTUS CDS 225176 226258 1 + 0 ID=LTnewLM_270010300.1:CDS:1;Parent=LTnewLM_270010300.1 ### LTnewLM_27 . polypeptide 225176 226258 . + . ID=LTnewLM_270010300.1:pep;Derives_from=LTnewLM_270010300.1;orthologous_to=LmjF.27.0550_mRNA;ortholog_cluster=OG0003256;product=term%3DRad17 P-loop domain/DNA polymerase III%2C delta subunit/AAA domain/ATPase family associated with various cellular activities (AAA)/Replication factor C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03215|Pfam:PF13177|Pfam:PF13401|Pfam:PF00004|Pfam:PF08542;Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 225188 225370 . + . Parent=LTnewLM_270010300.1:pep;Name=PF03215;signature_desc=Rad17 P-loop domain LTnewLM_27 Pfam protein_match 225242 225760 . + . Parent=LTnewLM_270010300.1:pep;Name=PF13177;signature_desc=DNA polymerase III%2C delta subunit LTnewLM_27 Pfam protein_match 225299 225679 . + . Parent=LTnewLM_270010300.1:pep;Name=PF13401;signature_desc=AAA domain LTnewLM_27 Pfam protein_match 225299 225751 . + . Parent=LTnewLM_270010300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 225956 226222 . + . Parent=LTnewLM_270010300.1:pep;Name=PF08542;signature_desc=Replication factor C C-terminal domain ### LTnewLM_27 AUGUSTUS gene 227452 228435 1 + . ID=LTnewLM_270010400 LTnewLM_27 AUGUSTUS mRNA 227452 228435 1 + . ID=LTnewLM_270010400.1;Parent=LTnewLM_270010400 LTnewLM_27 AUGUSTUS CDS 227452 228435 1 + 0 ID=LTnewLM_270010400.1:CDS:1;Parent=LTnewLM_270010400.1 ### LTnewLM_27 . polypeptide 227452 228435 . + . ID=LTnewLM_270010400.1:pep;Derives_from=LTnewLM_270010400.1;orthologous_to=LmjF.27.0560_mRNA;ortholog_cluster=OG0003257;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_27 Pfam protein_match 227521 228420 . + . Parent=LTnewLM_270010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 227530 228156 . + . Parent=LTnewLM_270010400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 229808 231457 1 + . ID=LTnewLM_270010500 LTnewLM_27 AUGUSTUS mRNA 229808 231457 1 + . ID=LTnewLM_270010500.1;Parent=LTnewLM_270010500 LTnewLM_27 AUGUSTUS CDS 229808 231457 1 + 0 ID=LTnewLM_270010500.1:CDS:1;Parent=LTnewLM_270010500.1 ### LTnewLM_27 . polypeptide 229808 231457 . + . ID=LTnewLM_270010500.1:pep;Derives_from=LTnewLM_270010500.1;orthologous_to=LmjF.27.0570_mRNA;ortholog_cluster=OG0003258;product=term%3DRing finger domain/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF00097;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_27 Pfam protein_match 229940 230071 . + . Parent=LTnewLM_270010500.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_27 Pfam protein_match 229943 230068 . + . Parent=LTnewLM_270010500.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_27 AUGUSTUS gene 232244 234334 1 + . ID=LTnewLM_270010600 LTnewLM_27 AUGUSTUS mRNA 232244 234334 1 + . ID=LTnewLM_270010600.1;Parent=LTnewLM_270010600 LTnewLM_27 AUGUSTUS CDS 232244 234334 1 + 0 ID=LTnewLM_270010600.1:CDS:1;Parent=LTnewLM_270010600.1 ### LTnewLM_27 . polypeptide 232244 234334 . + . ID=LTnewLM_270010600.1:pep;Derives_from=LTnewLM_270010600.1;orthologous_to=LmjF.27.0580_mRNA;ortholog_cluster=OG0003259;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 235320 237101 1 + . ID=LTnewLM_270010700 LTnewLM_27 AUGUSTUS mRNA 235320 237101 1 + . ID=LTnewLM_270010700.1;Parent=LTnewLM_270010700 LTnewLM_27 AUGUSTUS CDS 235320 237101 1 + 0 ID=LTnewLM_270010700.1:CDS:1;Parent=LTnewLM_270010700.1 ### LTnewLM_27 . polypeptide 235320 237101 . + . ID=LTnewLM_270010700.1:pep;Derives_from=LTnewLM_270010700.1;orthologous_to=LmjF.27.0590_mRNA;ortholog_cluster=OG0003260;product=term%3DDomain of unknown function (DUF4470)/Domain of unknown function (DUF4471)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14737|Pfam:PF14740 LTnewLM_27 Pfam protein_match 235719 235985 . + . Parent=LTnewLM_270010700.1:pep;Name=PF14737;signature_desc=Domain of unknown function (DUF4470) LTnewLM_27 Pfam protein_match 236079 236954 . + . Parent=LTnewLM_270010700.1:pep;Name=PF14740;signature_desc=Domain of unknown function (DUF4471) ### LTnewLM_27 AUGUSTUS gene 239121 242090 1 + . ID=LTnewLM_270010800 LTnewLM_27 AUGUSTUS mRNA 239121 242090 1 + . ID=LTnewLM_270010800.1;Parent=LTnewLM_270010800 LTnewLM_27 AUGUSTUS CDS 239121 242090 1 + 0 ID=LTnewLM_270010800.1:CDS:1;Parent=LTnewLM_270010800.1 ### LTnewLM_27 . polypeptide 239121 242090 . + . ID=LTnewLM_270010800.1:pep;Derives_from=LTnewLM_270010800.1;orthologous_to=LmjF.27.0600_mRNA;ortholog_cluster=OG0003261;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 242995 244383 1 + . ID=LTnewLM_270010900 LTnewLM_27 AUGUSTUS mRNA 242995 244383 1 + . ID=LTnewLM_270010900.1;Parent=LTnewLM_270010900 LTnewLM_27 AUGUSTUS CDS 242995 244383 1 + 0 ID=LTnewLM_270010900.1:CDS:1;Parent=LTnewLM_270010900.1 ### LTnewLM_27 . polypeptide 242995 244383 . + . ID=LTnewLM_270010900.1:pep;Derives_from=LTnewLM_270010900.1;orthologous_to=LmjF.27.0610_mRNA;ortholog_cluster=OG0003262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 246123 247562 1 + . ID=LTnewLM_270011000 LTnewLM_27 AUGUSTUS mRNA 246123 247562 1 + . ID=LTnewLM_270011000.1;Parent=LTnewLM_270011000 LTnewLM_27 AUGUSTUS CDS 246123 247562 1 + 0 ID=LTnewLM_270011000.1:CDS:1;Parent=LTnewLM_270011000.1 ### LTnewLM_27 . polypeptide 246123 247562 . + . ID=LTnewLM_270011000.1:pep;Derives_from=LTnewLM_270011000.1;orthologous_to=LmjF.27.0620_mRNA;ortholog_cluster=OG0003263;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 248195 250867 1 + . ID=LTnewLM_270011100 LTnewLM_27 AUGUSTUS mRNA 248195 250867 1 + . ID=LTnewLM_270011100.1;Parent=LTnewLM_270011100 LTnewLM_27 AUGUSTUS CDS 248195 250867 1 + 0 ID=LTnewLM_270011100.1:CDS:1;Parent=LTnewLM_270011100.1 ### LTnewLM_27 . polypeptide 248195 250867 . + . ID=LTnewLM_270011100.1:pep;Derives_from=LTnewLM_270011100.1;orthologous_to=LmjF.27.0630_mRNA;ortholog_cluster=OG0003264;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 252326 253270 1 + . ID=LTnewLM_270011200 LTnewLM_27 AUGUSTUS mRNA 252326 253270 1 + . ID=LTnewLM_270011200.1;Parent=LTnewLM_270011200 LTnewLM_27 AUGUSTUS CDS 252326 253270 1 + 0 ID=LTnewLM_270011200.1:CDS:1;Parent=LTnewLM_270011200.1 ### LTnewLM_27 . polypeptide 252326 253270 . + . ID=LTnewLM_270011200.1:pep;Derives_from=LTnewLM_270011200.1;orthologous_to=LmjF.27.0640_mRNA;ortholog_cluster=OG0003265;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 253976 254479 1 + . ID=LTnewLM_270011300 LTnewLM_27 AUGUSTUS mRNA 253976 254479 1 + . ID=LTnewLM_270011300.1;Parent=LTnewLM_270011300 LTnewLM_27 AUGUSTUS CDS 253976 254479 1 + 0 ID=LTnewLM_270011300.1:CDS:1;Parent=LTnewLM_270011300.1 ### LTnewLM_27 . polypeptide 253976 254479 . + . ID=LTnewLM_270011300.1:pep;Derives_from=LTnewLM_270011300.1;orthologous_to=LmjF.27.0650_mRNA;ortholog_cluster=OG0003266;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 258871 260397 1 + . ID=LTnewLM_270011400 LTnewLM_27 AUGUSTUS mRNA 258871 260397 1 + . ID=LTnewLM_270011400.1;Parent=LTnewLM_270011400 LTnewLM_27 AUGUSTUS CDS 258871 260397 1 + 0 ID=LTnewLM_270011400.1:CDS:1;Parent=LTnewLM_270011400.1 ### LTnewLM_27 . polypeptide 258871 260397 . + . ID=LTnewLM_270011400.1:pep;Derives_from=LTnewLM_270011400.1;orthologous_to=LmjF.27.0660_mRNA;ortholog_cluster=OG0003267;product=term%3DIGP family C-type lectin domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16825 LTnewLM_27 Pfam protein_match 259081 259518 . + . Parent=LTnewLM_270011400.1:pep;Name=PF16825;signature_desc=IGP family C-type lectin domain ### LTnewLM_27 AUGUSTUS gene 264877 266379 1 + . ID=LTnewLM_270011500 LTnewLM_27 AUGUSTUS mRNA 264877 266379 1 + . ID=LTnewLM_270011500.1;Parent=LTnewLM_270011500 LTnewLM_27 AUGUSTUS CDS 264877 266379 1 + 0 ID=LTnewLM_270011500.1:CDS:1;Parent=LTnewLM_270011500.1 ### LTnewLM_27 . polypeptide 264877 266379 . + . ID=LTnewLM_270011500.1:pep;Derives_from=LTnewLM_270011500.1;orthologous_to=LTnewLM_020009800.1,LTnewLM_020009800.2,LTnewLM_310008700.1,LTnewLM_310008800.1,LmjF.27.0670_mRNA,LmjF.31.0330_mRNA,LmjF.31.0340_mRNA;ortholog_cluster=OG0000025;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_27 Pfam protein_match 265192 266361 . + . Parent=LTnewLM_270011500.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_27 AUGUSTUS gene 270939 272546 1 + . ID=LTnewLM_270011600 LTnewLM_27 AUGUSTUS mRNA 270939 272546 1 + . ID=LTnewLM_270011600.1;Parent=LTnewLM_270011600 LTnewLM_27 AUGUSTUS CDS 270939 272546 1 + 0 ID=LTnewLM_270011600.1:CDS:1;Parent=LTnewLM_270011600.1 ### LTnewLM_27 . polypeptide 270939 272546 . + . ID=LTnewLM_270011600.1:pep;Derives_from=LTnewLM_270011600.1;orthologous_to=LTnewLM_310008600.1,LmjF.27.0680_mRNA,LmjF.31.0320_mRNA;ortholog_cluster=OG0000190;product=term%3DTryptophan/tyrosine permease family/Transmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03222|Pfam:PF01490;Ontology_term=GO:0003333 LTnewLM_27 Pfam protein_match 271344 272051 . + . Parent=LTnewLM_270011600.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 LTnewLM_27 Pfam protein_match 271344 272516 . + . Parent=LTnewLM_270011600.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_27 AUGUSTUS gene 275434 276036 0.75 + . ID=LTnewLM_270011700 LTnewLM_27 AUGUSTUS mRNA 275434 276036 0.75 + . ID=LTnewLM_270011700.1;Parent=LTnewLM_270011700 LTnewLM_27 AUGUSTUS CDS 275434 276036 0.75 + 0 ID=LTnewLM_270011700.1:CDS:1;Parent=LTnewLM_270011700.1 ### LTnewLM_27 . polypeptide 275434 276036 . + . ID=LTnewLM_270011700.1:pep;Derives_from=LTnewLM_270011700.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 277244 279997 1 + . ID=LTnewLM_270011800 LTnewLM_27 AUGUSTUS mRNA 277244 279997 1 + . ID=LTnewLM_270011800.1;Parent=LTnewLM_270011800 LTnewLM_27 AUGUSTUS CDS 277244 279997 1 + 0 ID=LTnewLM_270011800.1:CDS:1;Parent=LTnewLM_270011800.1 ### LTnewLM_27 . polypeptide 277244 279997 . + . ID=LTnewLM_270011800.1:pep;Derives_from=LTnewLM_270011800.1;orthologous_to=LmjF.27.0690_mRNA;ortholog_cluster=OG0003268;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 284589 285944 1 + . ID=LTnewLM_270011900 LTnewLM_27 AUGUSTUS mRNA 284589 285944 1 + . ID=LTnewLM_270011900.1;Parent=LTnewLM_270011900 LTnewLM_27 AUGUSTUS CDS 284589 285944 1 + 0 ID=LTnewLM_270011900.1:CDS:1;Parent=LTnewLM_270011900.1 ### LTnewLM_27 . polypeptide 284589 285944 . + . ID=LTnewLM_270011900.1:pep;Derives_from=LTnewLM_270011900.1;orthologous_to=LmjF.27.0700_mRNA;ortholog_cluster=OG0003269;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 289221 290573 0.99 + . ID=LTnewLM_270012000 LTnewLM_27 AUGUSTUS mRNA 289221 290573 0.99 + . ID=LTnewLM_270012000.1;Parent=LTnewLM_270012000 LTnewLM_27 AUGUSTUS CDS 289221 290573 0.99 + 0 ID=LTnewLM_270012000.1:CDS:1;Parent=LTnewLM_270012000.1 ### LTnewLM_27 . polypeptide 289221 290573 . + . ID=LTnewLM_270012000.1:pep;Derives_from=LTnewLM_270012000.1;orthologous_to=LmjF.27.0710_mRNA;ortholog_cluster=OG0003270;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 292229 293464 1 + . ID=LTnewLM_270012100 LTnewLM_27 AUGUSTUS mRNA 292229 293464 1 + . ID=LTnewLM_270012100.1;Parent=LTnewLM_270012100 LTnewLM_27 AUGUSTUS CDS 292229 293464 1 + 0 ID=LTnewLM_270012100.1:CDS:1;Parent=LTnewLM_270012100.1 ### LTnewLM_27 . polypeptide 292229 293464 . + . ID=LTnewLM_270012100.1:pep;Derives_from=LTnewLM_270012100.1;orthologous_to=LmjF.27.0720_mRNA;ortholog_cluster=OG0003271;product=term%3DUBA/TS-N domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00627;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 293351 293440 . + . Parent=LTnewLM_270012100.1:pep;Name=PF00627;signature_desc=UBA/TS-N domain;Ontology_term=GO:0005515 ### LTnewLM_27 Liftoff gene 294835 295934 . + . ID=LTnewLM_270012200;coverage=0.998;sequence_ID=0.947;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.27.0730_0 LTnewLM_27 Liftoff mRNA 294835 295934 . + . ID=LTnewLM_270012200.1;Parent=LTnewLM_270012200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 294835 294944 . + . ID=LTnewLM_270012200:five_prime_UTR;Parent=LTnewLM_270012200.1;extra_copy_number=0 LTnewLM_27 Liftoff CDS 294945 295934 . + 0 ID=LTnewLM_270012200.1:CDS:1;Parent=LTnewLM_270012200.1;extra_copy_number=0 LTnewLM_27 Liftoff mRNA 295172 295934 . + . ID=LTnewLM_270012200.2;Parent=LTnewLM_270012200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 295172 295331 . + . ID=LTnewLM_270012200:five_prime_UTR.1;Parent=LTnewLM_270012200.2;extra_copy_number=0 LTnewLM_27 Liftoff CDS 295332 295934 . + 0 ID=LTnewLM_270012200.2:CDS:1;Parent=LTnewLM_270012200.2;extra_copy_number=0 ### LTnewLM_27 . polypeptide 294945 295934 . + . ID=LTnewLM_270012200.1:pep;Derives_from=LTnewLM_270012200.1;orthologous_to=LmjF.27.0730.2_mRNA;ortholog_cluster=OG0003272;product=term%3DOxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_27 Pfam protein_match 295110 295400 . + . Parent=LTnewLM_270012200.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain LTnewLM_27 Pfam protein_match 295434 295787 . + . Parent=LTnewLM_270012200.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_27 . polypeptide 295332 295934 . + . ID=LTnewLM_270012200.2:pep;Derives_from=LTnewLM_270012200.2;orthologous_to=LmjF.27.0730.1_mRNA;ortholog_cluster=OG0003273;product=term%3DOxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_27 Pfam protein_match 295434 295787 . + . Parent=LTnewLM_270012200.2:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_27 AUGUSTUS gene 296856 297436 0.92 + . ID=LTnewLM_270012300 LTnewLM_27 AUGUSTUS mRNA 296856 297436 0.92 + . ID=LTnewLM_270012300.1;Parent=LTnewLM_270012300 LTnewLM_27 AUGUSTUS CDS 296856 297294 0.93 + 0 ID=LTnewLM_270012300.1:CDS:1;Parent=LTnewLM_270012300.1 LTnewLM_27 AUGUSTUS CDS 297372 297436 0.98 + 2 ID=LTnewLM_270012300.1:CDS:2;Parent=LTnewLM_270012300.1 ### LTnewLM_27 . polypeptide 296856 297436 . + . ID=LTnewLM_270012300.1:pep;Derives_from=LTnewLM_270012300.1;orthologous_to=LTnewLM_270028000.1;ortholog_cluster=OG0003274;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 298591 299196 1 + . ID=LTnewLM_270012400 LTnewLM_27 AUGUSTUS mRNA 298591 299196 1 + . ID=LTnewLM_270012400.1;Parent=LTnewLM_270012400 LTnewLM_27 AUGUSTUS CDS 298591 299196 1 + 0 ID=LTnewLM_270012400.1:CDS:1;Parent=LTnewLM_270012400.1 ### LTnewLM_27 . polypeptide 298591 299196 . + . ID=LTnewLM_270012400.1:pep;Derives_from=LTnewLM_270012400.1;orthologous_to=LmjF.27.0740_mRNA;ortholog_cluster=OG0003275;product=term%3DNADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01058;Ontology_term=GO:0055114,GO:0051536 LTnewLM_27 Pfam protein_match 298819 299139 . + . Parent=LTnewLM_270012400.1:pep;Name=PF01058;signature_desc=NADH ubiquinone oxidoreductase%2C 20 Kd subunit;Ontology_term=GO:0051536,GO:0055114 ### LTnewLM_27 AUGUSTUS gene 301930 302262 1 + . ID=LTnewLM_270012500 LTnewLM_27 AUGUSTUS mRNA 301930 302262 1 + . ID=LTnewLM_270012500.1;Parent=LTnewLM_270012500 LTnewLM_27 AUGUSTUS CDS 301930 302262 1 + 0 ID=LTnewLM_270012500.1:CDS:1;Parent=LTnewLM_270012500.1 ### LTnewLM_27 . polypeptide 301930 302262 . + . ID=LTnewLM_270012500.1:pep;Derives_from=LTnewLM_270012500.1;product=term%3DStress responsive A/B Barrel Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07876 LTnewLM_27 Pfam protein_match 301936 302205 . + . Parent=LTnewLM_270012500.1:pep;Name=PF07876;signature_desc=Stress responsive A/B Barrel Domain ### LTnewLM_27 AUGUSTUS gene 303093 303476 1 + . ID=LTnewLM_270012600 LTnewLM_27 AUGUSTUS mRNA 303093 303476 1 + . ID=LTnewLM_270012600.1;Parent=LTnewLM_270012600 LTnewLM_27 AUGUSTUS CDS 303093 303476 1 + 0 ID=LTnewLM_270012600.1:CDS:1;Parent=LTnewLM_270012600.1 ### LTnewLM_27 . polypeptide 303093 303476 . + . ID=LTnewLM_270012600.1:pep;Derives_from=LTnewLM_270012600.1;orthologous_to=LmjF.27.0750_mRNA;ortholog_cluster=OG0003276;product=term%3DStress responsive A/B Barrel Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07876 LTnewLM_27 Pfam protein_match 303177 303452 . + . Parent=LTnewLM_270012600.1:pep;Name=PF07876;signature_desc=Stress responsive A/B Barrel Domain ### LTnewLM_27 AUGUSTUS gene 305458 306060 1 + . ID=LTnewLM_270012700 LTnewLM_27 AUGUSTUS mRNA 305458 306060 1 + . ID=LTnewLM_270012700.1;Parent=LTnewLM_270012700 LTnewLM_27 AUGUSTUS CDS 305458 306060 1 + 0 ID=LTnewLM_270012700.1:CDS:1;Parent=LTnewLM_270012700.1 ### LTnewLM_27 . polypeptide 305458 306060 . + . ID=LTnewLM_270012700.1:pep;Derives_from=LTnewLM_270012700.1;orthologous_to=LmjF.27.0760_mRNA;ortholog_cluster=OG0003277;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_27 Pfam protein_match 305482 305850 . + . Parent=LTnewLM_270012700.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_27 Pfam protein_match 305485 305826 . + . Parent=LTnewLM_270012700.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_27 Pfam protein_match 305485 305850 . + . Parent=LTnewLM_270012700.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_27 Pfam protein_match 305485 305961 . + . Parent=LTnewLM_270012700.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_27 AUGUSTUS gene 309050 313051 1 + . ID=LTnewLM_270012800 LTnewLM_27 AUGUSTUS mRNA 309050 313051 1 + . ID=LTnewLM_270012800.1;Parent=LTnewLM_270012800 LTnewLM_27 AUGUSTUS CDS 309050 313051 1 + 0 ID=LTnewLM_270012800.1:CDS:1;Parent=LTnewLM_270012800.1 ### LTnewLM_27 . polypeptide 309050 313051 . + . ID=LTnewLM_270012800.1:pep;Derives_from=LTnewLM_270012800.1;orthologous_to=LmjF.27.0770_mRNA;ortholog_cluster=OG0003278;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 315551 316510 1 + . ID=LTnewLM_270012900 LTnewLM_27 AUGUSTUS mRNA 315551 316510 1 + . ID=LTnewLM_270012900.1;Parent=LTnewLM_270012900 LTnewLM_27 AUGUSTUS CDS 315551 316510 1 + 0 ID=LTnewLM_270012900.1:CDS:1;Parent=LTnewLM_270012900.1 ### LTnewLM_27 . polypeptide 315551 316510 . + . ID=LTnewLM_270012900.1:pep;Derives_from=LTnewLM_270012900.1;orthologous_to=LmjF.27.0780_mRNA;ortholog_cluster=OG0003279;product=term%3DMitochondrial calcium uniporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04678 LTnewLM_27 Pfam protein_match 315884 316438 . + . Parent=LTnewLM_270012900.1:pep;Name=PF04678;signature_desc=Mitochondrial calcium uniporter ### LTnewLM_27 AUGUSTUS gene 318723 321377 1 + . ID=LTnewLM_270013000 LTnewLM_27 AUGUSTUS mRNA 318723 321377 1 + . ID=LTnewLM_270013000.1;Parent=LTnewLM_270013000 LTnewLM_27 AUGUSTUS CDS 318723 321377 1 + 0 ID=LTnewLM_270013000.1:CDS:1;Parent=LTnewLM_270013000.1 ### LTnewLM_27 . polypeptide 318723 321377 . + . ID=LTnewLM_270013000.1:pep;Derives_from=LTnewLM_270013000.1;orthologous_to=LmjF.27.0790_mRNA;ortholog_cluster=OG0003280;product=term%3DMatE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01554;Ontology_term=GO:0006855,GO:0016020,GO:0055085,GO:0015297,GO:0015238 LTnewLM_27 Pfam protein_match 319884 320348 . + . Parent=LTnewLM_270013000.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 LTnewLM_27 Pfam protein_match 320550 321032 . + . Parent=LTnewLM_270013000.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 ### LTnewLM_27 AUGUSTUS gene 322569 323885 1.74 + . ID=LTnewLM_270013100 LTnewLM_27 AUGUSTUS mRNA 322569 323885 0.75 + . ID=LTnewLM_270013100.1;Parent=LTnewLM_270013100 LTnewLM_27 AUGUSTUS CDS 322569 322578 0.78 + 0 ID=LTnewLM_270013100.1:CDS:1;Parent=LTnewLM_270013100.1 LTnewLM_27 AUGUSTUS CDS 322849 323885 0.92 + 2 ID=LTnewLM_270013100.1:CDS:2;Parent=LTnewLM_270013100.1 LTnewLM_27 AUGUSTUS mRNA 322827 323885 0.99 + . ID=LTnewLM_270013100.2;Parent=LTnewLM_270013100 LTnewLM_27 AUGUSTUS CDS 322827 323885 0.99 + 0 ID=LTnewLM_270013100.2:CDS:1;Parent=LTnewLM_270013100.2 ### LTnewLM_27 . polypeptide 322569 323885 . + . ID=LTnewLM_270013100.1:pep;Derives_from=LTnewLM_270013100.1;orthologous_to=LTnewLM_270013100.2,LmjF.27.0800_mRNA;ortholog_cluster=OG0000406;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 322827 323885 . + . ID=LTnewLM_270013100.2:pep;Derives_from=LTnewLM_270013100.2;orthologous_to=LTnewLM_270013100.1,LmjF.27.0800_mRNA;ortholog_cluster=OG0000406;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 324597 324923 1 + . ID=LTnewLM_270013200 LTnewLM_27 AUGUSTUS mRNA 324597 324923 1 + . ID=LTnewLM_270013200.1;Parent=LTnewLM_270013200 LTnewLM_27 AUGUSTUS CDS 324597 324923 1 + 0 ID=LTnewLM_270013200.1:CDS:1;Parent=LTnewLM_270013200.1 ### LTnewLM_27 . polypeptide 324597 324923 . + . ID=LTnewLM_270013200.1:pep;Derives_from=LTnewLM_270013200.1;orthologous_to=LmjF.27.0810_mRNA;ortholog_cluster=OG0003281;product=term%3DGlutaredoxin/Glutathione S-transferase%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462|Pfam:PF13417;Ontology_term=GO:0005515,GO:0009055,GO:0045454,GO:0015035 LTnewLM_27 Pfam protein_match 324672 324857 . + . Parent=LTnewLM_270013200.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 LTnewLM_27 Pfam protein_match 324681 324866 . + . Parent=LTnewLM_270013200.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 328343 338215 1 + . ID=LTnewLM_270013300 LTnewLM_27 AUGUSTUS mRNA 328343 338215 1 + . ID=LTnewLM_270013300.1;Parent=LTnewLM_270013300 LTnewLM_27 AUGUSTUS CDS 328343 338215 1 + 0 ID=LTnewLM_270013300.1:CDS:1;Parent=LTnewLM_270013300.1 ### LTnewLM_27 . polypeptide 328343 338215 . + . ID=LTnewLM_270013300.1:pep;Derives_from=LTnewLM_270013300.1;orthologous_to=LmjF.27.0820_mRNA;ortholog_cluster=OG0003282;product=term%3DPeriplasmic copper-binding protein (NosD)/Right handed beta helix region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05048|Pfam:PF13229 LTnewLM_27 Pfam protein_match 329879 330286 . + . Parent=LTnewLM_270013300.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_27 Pfam protein_match 329882 330328 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_27 Pfam protein_match 330182 330601 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_27 Pfam protein_match 330377 330817 . + . Parent=LTnewLM_270013300.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_27 Pfam protein_match 330587 330958 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_27 Pfam protein_match 330809 331201 . + . Parent=LTnewLM_270013300.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_27 Pfam protein_match 330911 331525 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_27 Pfam protein_match 331685 332128 . + . Parent=LTnewLM_270013300.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_27 Pfam protein_match 331733 332203 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_27 Pfam protein_match 336284 336649 . + . Parent=LTnewLM_270013300.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_27 Pfam protein_match 336284 336673 . + . Parent=LTnewLM_270013300.1:pep;Name=PF13229;signature_desc=Right handed beta helix region ### LTnewLM_27 Liftoff gene 339161 340825 . + . ID=LTnewLM_270013400;coverage=1.0;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.0830_0 LTnewLM_27 Liftoff mRNA 339161 340825 . + . ID=LTnewLM_270013400.1;Parent=LTnewLM_270013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 339161 340825 . + 0 ID=LTnewLM_270013400.1:CDS:1;Parent=LTnewLM_270013400.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 339161 340825 . + . ID=LTnewLM_270013400.1:pep;Derives_from=LTnewLM_270013400.1;orthologous_to=LmjF.27.0830_mRNA;ortholog_cluster=OG0003283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 341810 344416 1 + . ID=LTnewLM_270013500 LTnewLM_27 AUGUSTUS mRNA 341810 344416 1 + . ID=LTnewLM_270013500.1;Parent=LTnewLM_270013500 LTnewLM_27 AUGUSTUS CDS 341810 344416 1 + 0 ID=LTnewLM_270013500.1:CDS:1;Parent=LTnewLM_270013500.1 ### LTnewLM_27 . polypeptide 341810 344416 . + . ID=LTnewLM_270013500.1:pep;Derives_from=LTnewLM_270013500.1;orthologous_to=LmjF.27.0840_mRNA;ortholog_cluster=OG0003284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 345259 347040 1 + . ID=LTnewLM_270013600 LTnewLM_27 AUGUSTUS mRNA 345259 347040 1 + . ID=LTnewLM_270013600.1;Parent=LTnewLM_270013600 LTnewLM_27 AUGUSTUS CDS 345259 347040 1 + 0 ID=LTnewLM_270013600.1:CDS:1;Parent=LTnewLM_270013600.1 ### LTnewLM_27 . polypeptide 345259 347040 . + . ID=LTnewLM_270013600.1:pep;Derives_from=LTnewLM_270013600.1;orthologous_to=LmjF.27.0850_mRNA;ortholog_cluster=OG0003285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 347835 350942 1 + . ID=LTnewLM_270013700 LTnewLM_27 AUGUSTUS mRNA 347835 350942 1 + . ID=LTnewLM_270013700.1;Parent=LTnewLM_270013700 LTnewLM_27 AUGUSTUS CDS 347835 350942 1 + 0 ID=LTnewLM_270013700.1:CDS:1;Parent=LTnewLM_270013700.1 ### LTnewLM_27 . polypeptide 347835 350942 . + . ID=LTnewLM_270013700.1:pep;Derives_from=LTnewLM_270013700.1;orthologous_to=LmjF.27.0860_mRNA;ortholog_cluster=OG0003286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 352926 355196 1 + . ID=LTnewLM_270013800 LTnewLM_27 AUGUSTUS mRNA 352926 355196 1 + . ID=LTnewLM_270013800.1;Parent=LTnewLM_270013800 LTnewLM_27 AUGUSTUS CDS 352926 355196 1 + 0 ID=LTnewLM_270013800.1:CDS:1;Parent=LTnewLM_270013800.1 ### LTnewLM_27 . polypeptide 352926 355196 . + . ID=LTnewLM_270013800.1:pep;Derives_from=LTnewLM_270013800.1;orthologous_to=LmjF.27.0870_mRNA;ortholog_cluster=OG0003287;product=term%3DDM10 domain/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06565|Pfam:PF13499|Pfam:PF13833 LTnewLM_27 Pfam protein_match 353199 353483 . + . Parent=LTnewLM_270013800.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_27 Pfam protein_match 353658 354017 . + . Parent=LTnewLM_270013800.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_27 Pfam protein_match 354183 354455 . + . Parent=LTnewLM_270013800.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_27 Pfam protein_match 354561 354728 . + . Parent=LTnewLM_270013800.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_27 Pfam protein_match 354597 354728 . + . Parent=LTnewLM_270013800.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_27 AUGUSTUS gene 356514 357017 1 + . ID=LTnewLM_270013900 LTnewLM_27 AUGUSTUS mRNA 356514 357017 1 + . ID=LTnewLM_270013900.1;Parent=LTnewLM_270013900 LTnewLM_27 AUGUSTUS CDS 356514 357017 1 + 0 ID=LTnewLM_270013900.1:CDS:1;Parent=LTnewLM_270013900.1 ### LTnewLM_27 . polypeptide 356514 357017 . + . ID=LTnewLM_270013900.1:pep;Derives_from=LTnewLM_270013900.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 358633 361653 1 + . ID=LTnewLM_270014000 LTnewLM_27 AUGUSTUS mRNA 358633 361653 1 + . ID=LTnewLM_270014000.1;Parent=LTnewLM_270014000 LTnewLM_27 AUGUSTUS CDS 358633 361653 1 + 0 ID=LTnewLM_270014000.1:CDS:1;Parent=LTnewLM_270014000.1 ### LTnewLM_27 . polypeptide 358633 361653 . + . ID=LTnewLM_270014000.1:pep;Derives_from=LTnewLM_270014000.1;orthologous_to=LmjF.27.0880_mRNA;ortholog_cluster=OG0003288;product=term%3DDehydrogenase E1 component/Transketolase%2C pyrimidine binding domain/2-oxoglutarate dehydrogenase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00676|Pfam:PF02779|Pfam:PF16870;Ontology_term=GO:0016624,GO:0008152 LTnewLM_27 Pfam protein_match 359332 360267 . + . Parent=LTnewLM_270014000.1:pep;Name=PF00676;signature_desc=Dehydrogenase E1 component;Ontology_term=GO:0016624,GO:0008152 LTnewLM_27 Pfam protein_match 360520 361167 . + . Parent=LTnewLM_270014000.1:pep;Name=PF02779;signature_desc=Transketolase%2C pyrimidine binding domain LTnewLM_27 Pfam protein_match 361183 361644 . + . Parent=LTnewLM_270014000.1:pep;Name=PF16870;signature_desc=2-oxoglutarate dehydrogenase C-terminal ### LTnewLM_27 . pseudogene 363723 369082 . + . ID=LTnewLM_270014100:pseudogene;coverage=0.993;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.0890_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 363723 369082 . + . ID=LTnewLM_270014100.1;Parent=LTnewLM_270014100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 363723 369082 . + . ID=LTnewLM_270014100.1:pseudogenic_exon:1;Parent=LTnewLM_270014100.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 363723 369082 . + . ID=LTnewLM_270014100.1:pep;Derives_from=LTnewLM_270014100.1;orthologous_to=LmjF.27.0890_mRNA;ortholog_cluster=OG0007559;product=term%3DPhosphatidylinositol-4-phosphate 5-Kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01504;Ontology_term=GO:0046488,GO:0016307 LTnewLM_27 Pfam protein_match 368133 368273 . + . Parent=LTnewLM_270014100.1:pep;Name=PF01504;signature_desc=Phosphatidylinositol-4-phosphate 5-Kinase;Ontology_term=GO:0016307,GO:0046488 LTnewLM_27 Pfam protein_match 368337 368744 . + . Parent=LTnewLM_270014100.1:pep;Name=PF01504;signature_desc=Phosphatidylinositol-4-phosphate 5-Kinase;Ontology_term=GO:0016307,GO:0046488 ### LTnewLM_27 AUGUSTUS gene 371112 371702 1 + . ID=LTnewLM_270014200 LTnewLM_27 AUGUSTUS mRNA 371112 371702 1 + . ID=LTnewLM_270014200.1;Parent=LTnewLM_270014200 LTnewLM_27 AUGUSTUS CDS 371112 371702 1 + 0 ID=LTnewLM_270014200.1:CDS:1;Parent=LTnewLM_270014200.1 ### LTnewLM_27 . polypeptide 371112 371702 . + . ID=LTnewLM_270014200.1:pep;Derives_from=LTnewLM_270014200.1;orthologous_to=LmjF.27.0900_mRNA;ortholog_cluster=OG0003289;product=term%3DProtein of unknown function (DUF778)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05608 LTnewLM_27 Pfam protein_match 371214 371360 . + . Parent=LTnewLM_270014200.1:pep;Name=PF05608;signature_desc=Protein of unknown function (DUF778) LTnewLM_27 Pfam protein_match 371388 371615 . + . Parent=LTnewLM_270014200.1:pep;Name=PF05608;signature_desc=Protein of unknown function (DUF778) ### LTnewLM_27 AUGUSTUS gene 374173 377448 1 - . ID=LTnewLM_270014300 LTnewLM_27 AUGUSTUS mRNA 374173 377448 1 - . ID=LTnewLM_270014300.1;Parent=LTnewLM_270014300 LTnewLM_27 AUGUSTUS CDS 374173 377448 1 - 0 ID=LTnewLM_270014300.1:CDS:1;Parent=LTnewLM_270014300.1 ### LTnewLM_27 . polypeptide 374173 377448 . - . ID=LTnewLM_270014300.1:pep;Derives_from=LTnewLM_270014300.1;orthologous_to=LmjF.27.0910_mRNA;ortholog_cluster=OG0003290;product=term%3DPep3/Vps18/deep orange family/Region in Clathrin and VPS/Vacuolar sorting protein 39 domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05131|Pfam:PF00637|Pfam:PF10367;Ontology_term=GO:0006886,GO:0016192 LTnewLM_27 Pfam protein_match 374365 374676 . - . Parent=LTnewLM_270014300.1:pep;Name=PF10367;signature_desc=Vacuolar sorting protein 39 domain 2 LTnewLM_27 Pfam protein_match 374911 375144 . - . Parent=LTnewLM_270014300.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_27 Pfam protein_match 375928 376317 . - . Parent=LTnewLM_270014300.1:pep;Name=PF05131;signature_desc=Pep3/Vps18/deep orange family ### LTnewLM_27 AUGUSTUS gene 389397 390323 1 - . ID=LTnewLM_270014400 LTnewLM_27 AUGUSTUS mRNA 389397 390323 1 - . ID=LTnewLM_270014400.1;Parent=LTnewLM_270014400 LTnewLM_27 AUGUSTUS CDS 389397 390323 1 - 0 ID=LTnewLM_270014400.1:CDS:1;Parent=LTnewLM_270014400.1 ### LTnewLM_27 . polypeptide 389397 390323 . - . ID=LTnewLM_270014400.1:pep;Derives_from=LTnewLM_270014400.1;orthologous_to=LmjF.27.0920_mRNA;ortholog_cluster=OG0003291;product=term%3DProtein of unknown function (DUF1295)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06966 LTnewLM_27 Pfam protein_match 389475 390233 . - . Parent=LTnewLM_270014400.1:pep;Name=PF06966;signature_desc=Protein of unknown function (DUF1295) ### LTnewLM_27 AUGUSTUS gene 392431 393663 1 - . ID=LTnewLM_270014500 LTnewLM_27 AUGUSTUS mRNA 392431 393663 1 - . ID=LTnewLM_270014500.1;Parent=LTnewLM_270014500 LTnewLM_27 AUGUSTUS CDS 392431 393663 1 - 0 ID=LTnewLM_270014500.1:CDS:1;Parent=LTnewLM_270014500.1 ### LTnewLM_27 . polypeptide 392431 393663 . - . ID=LTnewLM_270014500.1:pep;Derives_from=LTnewLM_270014500.1;orthologous_to=LmjF.27.0930_mRNA;ortholog_cluster=OG0003292;product=term%3DAcyl-CoA dehydrogenase%2C N-terminal domain/Acyl-CoA dehydrogenase%2C middle domain/Acyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02771|Pfam:PF02770|Pfam:PF00441|Pfam:PF08028;Ontology_term=GO:0008152,GO:0055114,GO:0003995,GO:0050660,GO:0016627 LTnewLM_27 Pfam protein_match 392452 392895 . - . Parent=LTnewLM_270014500.1:pep;Name=PF00441;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016627,GO:0055114 LTnewLM_27 Pfam protein_match 392506 392847 . - . Parent=LTnewLM_270014500.1:pep;Name=PF08028;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain LTnewLM_27 Pfam protein_match 392932 393204 . - . Parent=LTnewLM_270014500.1:pep;Name=PF02770;signature_desc=Acyl-CoA dehydrogenase%2C middle domain;Ontology_term=GO:0003995,GO:0055114 LTnewLM_27 Pfam protein_match 393217 393552 . - . Parent=LTnewLM_270014500.1:pep;Name=PF02771;signature_desc=Acyl-CoA dehydrogenase%2C N-terminal domain;Ontology_term=GO:0016627,GO:0050660,GO:0008152,GO:0055114 ### LTnewLM_27 . pseudogene 394594 396354 . - . ID=LTnewLM_270014600:pseudogene;coverage=0.999;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.0940_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 394594 396354 . - . ID=LTnewLM_270014600.1;Parent=LTnewLM_270014600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 394594 396354 . - . ID=LTnewLM_270014600.1:pseudogenic_exon:1;Parent=LTnewLM_270014600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 394594 396354 . - . ID=LTnewLM_270014600.1:pep;Derives_from=LTnewLM_270014600.1;orthologous_to=LmjF.27.0940_mRNA;ortholog_cluster=OG0007560;product=term%3DXRN 5'-3' exonuclease N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159;Ontology_term=GO:0003676,GO:0004527 LTnewLM_27 Pfam protein_match 395668 396354 . - . Parent=LTnewLM_270014600.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 ### LTnewLM_27 AUGUSTUS gene 399300 402038 1 - . ID=LTnewLM_270014700 LTnewLM_27 AUGUSTUS mRNA 399300 402038 1 - . ID=LTnewLM_270014700.1;Parent=LTnewLM_270014700 LTnewLM_27 AUGUSTUS CDS 399300 402038 1 - 0 ID=LTnewLM_270014700.1:CDS:1;Parent=LTnewLM_270014700.1 ### LTnewLM_27 . polypeptide 399300 402038 . - . ID=LTnewLM_270014700.1:pep;Derives_from=LTnewLM_270014700.1;orthologous_to=LmjF.27.0950_mRNA;ortholog_cluster=OG0003293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 403475 407776 1 - . ID=LTnewLM_270014800 LTnewLM_27 AUGUSTUS mRNA 403475 407776 1 - . ID=LTnewLM_270014800.1;Parent=LTnewLM_270014800 LTnewLM_27 AUGUSTUS CDS 403475 407776 1 - 0 ID=LTnewLM_270014800.1:CDS:1;Parent=LTnewLM_270014800.1 ### LTnewLM_27 . polypeptide 403475 407776 . - . ID=LTnewLM_270014800.1:pep;Derives_from=LTnewLM_270014800.1;orthologous_to=LmjF.27.0960_mRNA;ortholog_cluster=OG0003294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 414749 420262 1 - . ID=LTnewLM_270014900 LTnewLM_27 AUGUSTUS mRNA 414749 420262 1 - . ID=LTnewLM_270014900.1;Parent=LTnewLM_270014900 LTnewLM_27 AUGUSTUS CDS 414749 420262 1 - 0 ID=LTnewLM_270014900.1:CDS:1;Parent=LTnewLM_270014900.1 ### LTnewLM_27 . polypeptide 414749 420262 . - . ID=LTnewLM_270014900.1:pep;Derives_from=LTnewLM_270014900.1;orthologous_to=LTnewLM_270015000.1,LmjF.27.0970_mRNA,LmjF.27.0980_mRNA;ortholog_cluster=OG0000191;product=term%3DABC-2 family transporter protein/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_27 Pfam protein_match 415271 415699 . - . Parent=LTnewLM_270014900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 415901 417010 . - . Parent=LTnewLM_270014900.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_27 Pfam protein_match 417623 418051 . - . Parent=LTnewLM_270014900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 418310 419758 . - . Parent=LTnewLM_270014900.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_27 AUGUSTUS gene 425656 431297 1 - . ID=LTnewLM_270015000 LTnewLM_27 AUGUSTUS mRNA 425656 431297 1 - . ID=LTnewLM_270015000.1;Parent=LTnewLM_270015000 LTnewLM_27 AUGUSTUS CDS 425656 428973 1 - 0 ID=LTnewLM_270015000.1:CDS:1;Parent=LTnewLM_270015000.1 LTnewLM_27 AUGUSTUS CDS 429021 431297 1 - 0 ID=LTnewLM_270015000.1:CDS:2;Parent=LTnewLM_270015000.1 ### LTnewLM_27 . polypeptide 425656 431297 . - . ID=LTnewLM_270015000.1:pep;Derives_from=LTnewLM_270015000.1;orthologous_to=LTnewLM_270014900.1,LmjF.27.0970_mRNA,LmjF.27.0980_mRNA;ortholog_cluster=OG0000191;product=term%3DABC-2 family transporter protein/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_27 Pfam protein_match 426225 426653 . - . Parent=LTnewLM_270015000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 426855 427964 . - . Parent=LTnewLM_270015000.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_27 Pfam protein_match 428577 429005 . - . Parent=LTnewLM_270015000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 429219 430667 . - . Parent=LTnewLM_270015000.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_27 AUGUSTUS gene 434316 435158 1 - . ID=LTnewLM_270015100 LTnewLM_27 AUGUSTUS mRNA 434316 435158 1 - . ID=LTnewLM_270015100.1;Parent=LTnewLM_270015100 LTnewLM_27 AUGUSTUS CDS 434316 435158 1 - 0 ID=LTnewLM_270015100.1:CDS:1;Parent=LTnewLM_270015100.1 ### LTnewLM_27 . polypeptide 434316 435158 . - . ID=LTnewLM_270015100.1:pep;Derives_from=LTnewLM_270015100.1;orthologous_to=LmjF.27.0990_mRNA;ortholog_cluster=OG0003295;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 435943 437082 1 - . ID=LTnewLM_270015200 LTnewLM_27 AUGUSTUS mRNA 435943 437082 1 - . ID=LTnewLM_270015200.1;Parent=LTnewLM_270015200 LTnewLM_27 AUGUSTUS CDS 435943 437082 1 - 0 ID=LTnewLM_270015200.1:CDS:1;Parent=LTnewLM_270015200.1 ### LTnewLM_27 . polypeptide 435943 437082 . - . ID=LTnewLM_270015200.1:pep;Derives_from=LTnewLM_270015200.1;orthologous_to=LmjF.27.1000_mRNA;ortholog_cluster=OG0003296;product=term%3DTatD related DNase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01026;Ontology_term=GO:0016888 LTnewLM_27 Pfam protein_match 435952 437010 . - . Parent=LTnewLM_270015200.1:pep;Name=PF01026;signature_desc=TatD related DNase;Ontology_term=GO:0016888 ### LTnewLM_27 AUGUSTUS gene 438456 441260 1 - . ID=LTnewLM_270015300 LTnewLM_27 AUGUSTUS mRNA 438456 441260 1 - . ID=LTnewLM_270015300.1;Parent=LTnewLM_270015300 LTnewLM_27 AUGUSTUS CDS 438456 441260 1 - 0 ID=LTnewLM_270015300.1:CDS:1;Parent=LTnewLM_270015300.1 ### LTnewLM_27 . polypeptide 438456 441260 . - . ID=LTnewLM_270015300.1:pep;Derives_from=LTnewLM_270015300.1;orthologous_to=LmjF.27.1010_mRNA;ortholog_cluster=OG0003297;product=term%3DExocyst complex component Sec6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06046;Ontology_term=GO:0006887,GO:0000145 LTnewLM_27 Pfam protein_match 438738 440114 . - . Parent=LTnewLM_270015300.1:pep;Name=PF06046;signature_desc=Exocyst complex component Sec6;Ontology_term=GO:0006887,GO:0000145 ### LTnewLM_27 AUGUSTUS gene 442214 442834 1 - . ID=LTnewLM_270015400 LTnewLM_27 AUGUSTUS mRNA 442214 442834 1 - . ID=LTnewLM_270015400.1;Parent=LTnewLM_270015400 LTnewLM_27 AUGUSTUS CDS 442214 442834 1 - 0 ID=LTnewLM_270015400.1:CDS:1;Parent=LTnewLM_270015400.1 ### LTnewLM_27 . polypeptide 442214 442834 . - . ID=LTnewLM_270015400.1:pep;Derives_from=LTnewLM_270015400.1;orthologous_to=LmjF.27.1020_mRNA;ortholog_cluster=OG0003298;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 443885 446653 1 - . ID=LTnewLM_270015500 LTnewLM_27 AUGUSTUS mRNA 443885 446653 1 - . ID=LTnewLM_270015500.1;Parent=LTnewLM_270015500 LTnewLM_27 AUGUSTUS CDS 443885 446653 1 - 0 ID=LTnewLM_270015500.1:CDS:1;Parent=LTnewLM_270015500.1 ### LTnewLM_27 . polypeptide 443885 446653 . - . ID=LTnewLM_270015500.1:pep;Derives_from=LTnewLM_270015500.1;orthologous_to=LmjF.27.1030_mRNA;ortholog_cluster=OG0003299;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 448075 449331 1 - . ID=LTnewLM_270015600 LTnewLM_27 AUGUSTUS mRNA 448075 449331 1 - . ID=LTnewLM_270015600.1;Parent=LTnewLM_270015600 LTnewLM_27 AUGUSTUS CDS 448075 449331 1 - 0 ID=LTnewLM_270015600.1:CDS:1;Parent=LTnewLM_270015600.1 ### LTnewLM_27 . polypeptide 448075 449331 . - . ID=LTnewLM_270015600.1:pep;Derives_from=LTnewLM_270015600.1;orthologous_to=LmjF.27.1040_mRNA;ortholog_cluster=OG0003300;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 450262 450702 1 - . ID=LTnewLM_270015700 LTnewLM_27 AUGUSTUS mRNA 450262 450702 1 - . ID=LTnewLM_270015700.1;Parent=LTnewLM_270015700 LTnewLM_27 AUGUSTUS CDS 450262 450702 1 - 0 ID=LTnewLM_270015700.1:CDS:1;Parent=LTnewLM_270015700.1 ### LTnewLM_27 . polypeptide 450262 450702 . - . ID=LTnewLM_270015700.1:pep;Derives_from=LTnewLM_270015700.1;orthologous_to=LmjF.27.1045_mRNA;ortholog_cluster=OG0003301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 451448 453448 1 - . ID=LTnewLM_270015800 LTnewLM_27 AUGUSTUS mRNA 451448 453448 1 - . ID=LTnewLM_270015800.1;Parent=LTnewLM_270015800 LTnewLM_27 AUGUSTUS CDS 451448 453448 1 - 0 ID=LTnewLM_270015800.1:CDS:1;Parent=LTnewLM_270015800.1 ### LTnewLM_27 . polypeptide 451448 453448 . - . ID=LTnewLM_270015800.1:pep;Derives_from=LTnewLM_270015800.1;orthologous_to=LmjF.27.1050_mRNA;ortholog_cluster=OG0003302;product=term%3DHolliday junction DNA helicase RuvB P-loop domain/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05496|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0006310,GO:0009378,GO:0006281,GO:0005524 LTnewLM_27 Pfam protein_match 451625 451759 . - . Parent=LTnewLM_270015800.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_27 Pfam protein_match 451832 452221 . - . Parent=LTnewLM_270015800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 452477 452587 . - . Parent=LTnewLM_270015800.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_27 Pfam protein_match 452663 453061 . - . Parent=LTnewLM_270015800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 452693 453061 . - . Parent=LTnewLM_270015800.1:pep;Name=PF05496;signature_desc=Holliday junction DNA helicase RuvB P-loop domain;Ontology_term=GO:0009378,GO:0006281,GO:0006310 ### LTnewLM_27 AUGUSTUS gene 455615 456937 1 - . ID=LTnewLM_270015900 LTnewLM_27 AUGUSTUS mRNA 455615 456937 1 - . ID=LTnewLM_270015900.1;Parent=LTnewLM_270015900 LTnewLM_27 AUGUSTUS CDS 455615 456937 1 - 0 ID=LTnewLM_270015900.1:CDS:1;Parent=LTnewLM_270015900.1 ### LTnewLM_27 . polypeptide 455615 456937 . - . ID=LTnewLM_270015900.1:pep;Derives_from=LTnewLM_270015900.1;orthologous_to=LmjF.27.1060_mRNA;ortholog_cluster=OG0003303;product=term%3DAminotransferase class-V/Beta-eliminating lyase/DegT/DnrJ/EryC1/StrS aminotransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00266|Pfam:PF01212|Pfam:PF01041;Ontology_term=GO:0016829,GO:0008152,GO:0006520 LTnewLM_27 Pfam protein_match 455723 456808 . - . Parent=LTnewLM_270015900.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 LTnewLM_27 Pfam protein_match 456002 456685 . - . Parent=LTnewLM_270015900.1:pep;Name=PF01212;signature_desc=Beta-eliminating lyase;Ontology_term=GO:0016829,GO:0006520 LTnewLM_27 Pfam protein_match 456269 456664 . - . Parent=LTnewLM_270015900.1:pep;Name=PF01041;signature_desc=DegT/DnrJ/EryC1/StrS aminotransferase family ### LTnewLM_27 AUGUSTUS gene 458433 461426 1 - . ID=LTnewLM_270016000 LTnewLM_27 AUGUSTUS mRNA 458433 461426 1 - . ID=LTnewLM_270016000.1;Parent=LTnewLM_270016000 LTnewLM_27 AUGUSTUS CDS 458433 461426 1 - 0 ID=LTnewLM_270016000.1:CDS:1;Parent=LTnewLM_270016000.1 ### LTnewLM_27 . polypeptide 458433 461426 . - . ID=LTnewLM_270016000.1:pep;Derives_from=LTnewLM_270016000.1;orthologous_to=LmjF.27.1070_mRNA;ortholog_cluster=OG0003304;product=term%3DAAA domain/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13401|Pfam:PF00004;Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 459156 459398 . - . Parent=LTnewLM_270016000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 459969 460463 . - . Parent=LTnewLM_270016000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 460077 460463 . - . Parent=LTnewLM_270016000.1:pep;Name=PF13401;signature_desc=AAA domain ### LTnewLM_27 AUGUSTUS gene 463577 468286 1 - . ID=LTnewLM_270016100 LTnewLM_27 AUGUSTUS mRNA 463577 468286 1 - . ID=LTnewLM_270016100.1;Parent=LTnewLM_270016100 LTnewLM_27 AUGUSTUS CDS 463577 468286 1 - 0 ID=LTnewLM_270016100.1:CDS:1;Parent=LTnewLM_270016100.1 ### LTnewLM_27 . polypeptide 463577 468286 . - . ID=LTnewLM_270016100.1:pep;Derives_from=LTnewLM_270016100.1;orthologous_to=LmjF.27.1080_mRNA;ortholog_cluster=OG0003305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 470906 471499 1 - . ID=LTnewLM_270016200 LTnewLM_27 AUGUSTUS mRNA 470906 471499 1 - . ID=LTnewLM_270016200.1;Parent=LTnewLM_270016200 LTnewLM_27 AUGUSTUS CDS 470906 471499 1 - 0 ID=LTnewLM_270016200.1:CDS:1;Parent=LTnewLM_270016200.1 ### LTnewLM_27 . polypeptide 470906 471499 . - . ID=LTnewLM_270016200.1:pep;Derives_from=LTnewLM_270016200.1;orthologous_to=LmjF.27.1090_mRNA;ortholog_cluster=OG0003306;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 472340 474280 1 - . ID=LTnewLM_270016300 LTnewLM_27 AUGUSTUS mRNA 472340 474280 1 - . ID=LTnewLM_270016300.1;Parent=LTnewLM_270016300 LTnewLM_27 AUGUSTUS CDS 472340 474280 1 - 0 ID=LTnewLM_270016300.1:CDS:1;Parent=LTnewLM_270016300.1 ### LTnewLM_27 . polypeptide 472340 474280 . - . ID=LTnewLM_270016300.1:pep;Derives_from=LTnewLM_270016300.1;orthologous_to=LmjF.27.1100_mRNA;ortholog_cluster=OG0003307;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 475900 476604 1 - . ID=LTnewLM_270016400 LTnewLM_27 AUGUSTUS mRNA 475900 476604 1 - . ID=LTnewLM_270016400.1;Parent=LTnewLM_270016400 LTnewLM_27 AUGUSTUS CDS 475900 476604 1 - 0 ID=LTnewLM_270016400.1:CDS:1;Parent=LTnewLM_270016400.1 ### LTnewLM_27 . polypeptide 475900 476604 . - . ID=LTnewLM_270016400.1:pep;Derives_from=LTnewLM_270016400.1;orthologous_to=LmjF.27.1110_mRNA;ortholog_cluster=OG0003308;product=term%3DMitochondrial RNA binding protein MRP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09387 LTnewLM_27 Pfam protein_match 476050 476550 . - . Parent=LTnewLM_270016400.1:pep;Name=PF09387;signature_desc=Mitochondrial RNA binding protein MRP ### LTnewLM_27 AUGUSTUS gene 477872 478537 1 - . ID=LTnewLM_270016500 LTnewLM_27 AUGUSTUS mRNA 477872 478537 1 - . ID=LTnewLM_270016500.1;Parent=LTnewLM_270016500 LTnewLM_27 AUGUSTUS CDS 477872 478537 1 - 0 ID=LTnewLM_270016500.1:CDS:1;Parent=LTnewLM_270016500.1 ### LTnewLM_27 . polypeptide 477872 478537 . - . ID=LTnewLM_270016500.1:pep;Derives_from=LTnewLM_270016500.1;orthologous_to=LmjF.27.1120_mRNA;ortholog_cluster=OG0003309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 482079 484514 1 - . ID=LTnewLM_270016600 LTnewLM_27 AUGUSTUS mRNA 482079 484514 1 - . ID=LTnewLM_270016600.1;Parent=LTnewLM_270016600 LTnewLM_27 AUGUSTUS CDS 482079 484514 1 - 0 ID=LTnewLM_270016600.1:CDS:1;Parent=LTnewLM_270016600.1 ### LTnewLM_27 . polypeptide 482079 484514 . - . ID=LTnewLM_270016600.1:pep;Derives_from=LTnewLM_270016600.1;orthologous_to=LmjF.27.1130_mRNA;ortholog_cluster=OG0003310;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF13432|Pfam:PF14559|Pfam:PF13174;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 482484 482573 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 482901 483044 . - . Parent=LTnewLM_270016600.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat LTnewLM_27 Pfam protein_match 482907 482981 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 482907 482981 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 482907 483044 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_27 Pfam protein_match 482991 483086 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 483573 483704 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_27 Pfam protein_match 483753 483833 . - . Parent=LTnewLM_270016600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 487475 489226 1 - . ID=LTnewLM_270016700 LTnewLM_27 AUGUSTUS mRNA 487475 489226 1 - . ID=LTnewLM_270016700.1;Parent=LTnewLM_270016700 LTnewLM_27 AUGUSTUS CDS 487475 489226 1 - 0 ID=LTnewLM_270016700.1:CDS:1;Parent=LTnewLM_270016700.1 ### LTnewLM_27 . polypeptide 487475 489226 . - . ID=LTnewLM_270016700.1:pep;Derives_from=LTnewLM_270016700.1;orthologous_to=LmjF.27.1140_mRNA;ortholog_cluster=OG0003311;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 491162 492622 1 - . ID=LTnewLM_270016800 LTnewLM_27 AUGUSTUS mRNA 491162 492622 1 - . ID=LTnewLM_270016800.1;Parent=LTnewLM_270016800 LTnewLM_27 AUGUSTUS CDS 491162 492622 1 - 0 ID=LTnewLM_270016800.1:CDS:1;Parent=LTnewLM_270016800.1 ### LTnewLM_27 . polypeptide 491162 492622 . - . ID=LTnewLM_270016800.1:pep;Derives_from=LTnewLM_270016800.1;orthologous_to=LmjF.27.1150_mRNA;ortholog_cluster=OG0003312;product=term%3DJmjC domain%2C hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02373 LTnewLM_27 Pfam protein_match 491648 491911 . - . Parent=LTnewLM_270016800.1:pep;Name=PF02373;signature_desc=JmjC domain%2C hydroxylase ### LTnewLM_27 AUGUSTUS gene 493453 496413 1 - . ID=LTnewLM_270016900 LTnewLM_27 AUGUSTUS mRNA 493453 496413 1 - . ID=LTnewLM_270016900.1;Parent=LTnewLM_270016900 LTnewLM_27 AUGUSTUS CDS 493453 496413 1 - 0 ID=LTnewLM_270016900.1:CDS:1;Parent=LTnewLM_270016900.1 ### LTnewLM_27 . polypeptide 493453 496413 . - . ID=LTnewLM_270016900.1:pep;Derives_from=LTnewLM_270016900.1;orthologous_to=LmjF.27.1160_mRNA;ortholog_cluster=OG0003313;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 497160 497885 1 - . ID=LTnewLM_270017000 LTnewLM_27 AUGUSTUS mRNA 497160 497885 1 - . ID=LTnewLM_270017000.1;Parent=LTnewLM_270017000 LTnewLM_27 AUGUSTUS CDS 497160 497885 1 - 0 ID=LTnewLM_270017000.1:CDS:1;Parent=LTnewLM_270017000.1 ### LTnewLM_27 . polypeptide 497160 497885 . - . ID=LTnewLM_270017000.1:pep;Derives_from=LTnewLM_270017000.1;orthologous_to=LmjF.27.1170_mRNA;ortholog_cluster=OG0003314;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 500976 502244 1 - . ID=LTnewLM_270017100 LTnewLM_27 AUGUSTUS mRNA 500976 502244 1 - . ID=LTnewLM_270017100.1;Parent=LTnewLM_270017100 LTnewLM_27 AUGUSTUS CDS 500976 502244 1 - 0 ID=LTnewLM_270017100.1:CDS:1;Parent=LTnewLM_270017100.1 ### LTnewLM_27 . polypeptide 500976 502244 . - . ID=LTnewLM_270017100.1:pep;Derives_from=LTnewLM_270017100.1;orthologous_to=LmjF.27.1180_mRNA;ortholog_cluster=OG0003315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 505479 505802 0.57 - . ID=LTnewLM_270017200 LTnewLM_27 AUGUSTUS mRNA 505479 505802 0.57 - . ID=LTnewLM_270017200.1;Parent=LTnewLM_270017200 LTnewLM_27 AUGUSTUS CDS 505479 505802 0.57 - 0 ID=LTnewLM_270017200.1:CDS:1;Parent=LTnewLM_270017200.1 ### LTnewLM_27 . polypeptide 505479 505802 . - . ID=LTnewLM_270017200.1:pep;Derives_from=LTnewLM_270017200.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 509797 511044 1 - . ID=LTnewLM_270017300 LTnewLM_27 AUGUSTUS mRNA 509797 511044 1 - . ID=LTnewLM_270017300.1;Parent=LTnewLM_270017300 LTnewLM_27 AUGUSTUS CDS 509797 511044 1 - 0 ID=LTnewLM_270017300.1:CDS:1;Parent=LTnewLM_270017300.1 ### LTnewLM_27 . polypeptide 509797 511044 . - . ID=LTnewLM_270017300.1:pep;Derives_from=LTnewLM_270017300.1;orthologous_to=LmjF.27.1200_mRNA;ortholog_cluster=OG0003316;product=term%3DRING-H2 zinc finger domain/Anaphase-promoting complex subunit 11 RING-H2 finger/Ring finger domain/RING-like zinc finger/RING-type zinc-finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12678|Pfam:PF12861|Pfam:PF13639|Pfam:PF17123|Pfam:PF13445;Ontology_term=GO:0005680,GO:0005515,GO:0004842,GO:0008270 LTnewLM_27 Pfam protein_match 510280 510411 . - . Parent=LTnewLM_270017300.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_27 Pfam protein_match 510283 510408 . - . Parent=LTnewLM_270017300.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_27 Pfam protein_match 510283 510420 . - . Parent=LTnewLM_270017300.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 LTnewLM_27 Pfam protein_match 510289 510402 . - . Parent=LTnewLM_270017300.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_27 Pfam protein_match 510322 510405 . - . Parent=LTnewLM_270017300.1:pep;Name=PF17123;signature_desc=RING-like zinc finger ### LTnewLM_27 AUGUSTUS gene 514751 516418 1 - . ID=LTnewLM_270017400 LTnewLM_27 AUGUSTUS mRNA 514751 516418 1 - . ID=LTnewLM_270017400.1;Parent=LTnewLM_270017400 LTnewLM_27 AUGUSTUS CDS 514751 516418 1 - 0 ID=LTnewLM_270017400.1:CDS:1;Parent=LTnewLM_270017400.1 ### LTnewLM_27 . polypeptide 514751 516418 . - . ID=LTnewLM_270017400.1:pep;Derives_from=LTnewLM_270017400.1;orthologous_to=LmjF.27.1210_mRNA;ortholog_cluster=OG0003317;product=term%3DInitiation factor 2 subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01008;Ontology_term=GO:0044237 LTnewLM_27 Pfam protein_match 514832 515515 . - . Parent=LTnewLM_270017400.1:pep;Name=PF01008;signature_desc=Initiation factor 2 subunit family;Ontology_term=GO:0044237 ### LTnewLM_27 AUGUSTUS gene 519140 520375 1 - . ID=LTnewLM_270017500 LTnewLM_27 AUGUSTUS mRNA 519140 520375 1 - . ID=LTnewLM_270017500.1;Parent=LTnewLM_270017500 LTnewLM_27 AUGUSTUS CDS 519140 520375 1 - 0 ID=LTnewLM_270017500.1:CDS:1;Parent=LTnewLM_270017500.1 ### LTnewLM_27 . polypeptide 519140 520375 . - . ID=LTnewLM_270017500.1:pep;Derives_from=LTnewLM_270017500.1;orthologous_to=LmjF.27.1220_mRNA;ortholog_cluster=OG0003318;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 521662 523218 1 - . ID=LTnewLM_270017600 LTnewLM_27 AUGUSTUS mRNA 521662 523218 1 - . ID=LTnewLM_270017600.1;Parent=LTnewLM_270017600 LTnewLM_27 AUGUSTUS CDS 521662 523218 1 - 0 ID=LTnewLM_270017600.1:CDS:1;Parent=LTnewLM_270017600.1 ### LTnewLM_27 . polypeptide 521662 523218 . - . ID=LTnewLM_270017600.1:pep;Derives_from=LTnewLM_270017600.1;orthologous_to=LmjF.27.1230_mRNA;ortholog_cluster=OG0003319;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 524564 524860 0.72 - . ID=LTnewLM_270017700 LTnewLM_27 AUGUSTUS mRNA 524564 524860 0.72 - . ID=LTnewLM_270017700.1;Parent=LTnewLM_270017700 LTnewLM_27 AUGUSTUS CDS 524564 524860 0.72 - 0 ID=LTnewLM_270017700.1:CDS:1;Parent=LTnewLM_270017700.1 ### LTnewLM_27 . polypeptide 524564 524860 . - . ID=LTnewLM_270017700.1:pep;Derives_from=LTnewLM_270017700.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 526127 526468 0.53 - . ID=LTnewLM_270017800 LTnewLM_27 AUGUSTUS mRNA 526127 526468 0.53 - . ID=LTnewLM_270017800.1;Parent=LTnewLM_270017800 LTnewLM_27 AUGUSTUS CDS 526127 526468 0.53 - 0 ID=LTnewLM_270017800.1:CDS:1;Parent=LTnewLM_270017800.1 ### LTnewLM_27 . polypeptide 526127 526468 . - . ID=LTnewLM_270017800.1:pep;Derives_from=LTnewLM_270017800.1;orthologous_to=LTnewLM_130005800.1,LmjF.13.0090_mRNA;ortholog_cluster=OG0000324;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 529297 530262 1 - . ID=LTnewLM_270017900 LTnewLM_27 AUGUSTUS mRNA 529297 530262 1 - . ID=LTnewLM_270017900.1;Parent=LTnewLM_270017900 LTnewLM_27 AUGUSTUS CDS 529297 530262 1 - 0 ID=LTnewLM_270017900.1:CDS:1;Parent=LTnewLM_270017900.1 ### LTnewLM_27 . polypeptide 529297 530262 . - . ID=LTnewLM_270017900.1:pep;Derives_from=LTnewLM_270017900.1;orthologous_to=LmjF.27.1250_mRNA;ortholog_cluster=OG0003320;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 529342 529437 . - . Parent=LTnewLM_270017900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 529825 529929 . - . Parent=LTnewLM_270017900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 529942 530046 . - . Parent=LTnewLM_270017900.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 531507 533096 1 - . ID=LTnewLM_270018000 LTnewLM_27 AUGUSTUS mRNA 531507 533096 1 - . ID=LTnewLM_270018000.1;Parent=LTnewLM_270018000 LTnewLM_27 AUGUSTUS CDS 531507 533096 1 - 0 ID=LTnewLM_270018000.1:CDS:1;Parent=LTnewLM_270018000.1 ### LTnewLM_27 . polypeptide 531507 533096 . - . ID=LTnewLM_270018000.1:pep;Derives_from=LTnewLM_270018000.1;orthologous_to=LmjF.27.1260_mRNA;ortholog_cluster=OG0003321;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 531531 532997 . - . Parent=LTnewLM_270018000.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_27 Liftoff gene 533852 535684 . - . ID=LTnewLM_270018100;coverage=0.998;sequence_ID=0.922;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1265_0 LTnewLM_27 Liftoff mRNA 533852 535684 . - . ID=LTnewLM_270018100.1;Parent=LTnewLM_270018100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 533852 535684 . - 0 ID=LTnewLM_270018100.1:CDS:1;Parent=LTnewLM_270018100.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 533852 535684 . - . ID=LTnewLM_270018100.1:pep;Derives_from=LTnewLM_270018100.1;orthologous_to=LmjF.27.1265_mRNA;ortholog_cluster=OG0003322;product=term%3DCation efflux family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01545;Ontology_term=GO:0006812,GO:0008324,GO:0055085,GO:0016021 LTnewLM_27 Pfam protein_match 534122 534739 . - . Parent=LTnewLM_270018100.1:pep;Name=PF01545;signature_desc=Cation efflux family;Ontology_term=GO:0008324,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_27 Liftoff gene 537457 539207 . + . ID=LTnewLM_270018200;coverage=0.999;sequence_ID=0.944;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.27.1270_0 LTnewLM_27 Liftoff mRNA 537457 539207 . + . ID=LTnewLM_270018200.1;Parent=LTnewLM_270018200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 537457 537479 . + . ID=LTnewLM_270018200:five_prime_UTR;Parent=LTnewLM_270018200.1;extra_copy_number=0 LTnewLM_27 Liftoff CDS 537480 539207 . + 0 ID=LTnewLM_270018200.1:CDS:1;Parent=LTnewLM_270018200.1;extra_copy_number=0 LTnewLM_27 Liftoff mRNA 537489 539207 . + . ID=LTnewLM_270018200.2;Parent=LTnewLM_270018200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 537489 537806 . + . ID=LTnewLM_270018200:five_prime_UTR.1;Parent=LTnewLM_270018200.2;extra_copy_number=0 LTnewLM_27 Liftoff CDS 537807 539207 . + 0 ID=LTnewLM_270018200.2:CDS:1;Parent=LTnewLM_270018200.2;extra_copy_number=0 ### LTnewLM_27 . polypeptide 537480 539207 . + . ID=LTnewLM_270018200.1:pep;Derives_from=LTnewLM_270018200.1;orthologous_to=LTnewLM_270018200.2,LmjF.27.1270.1_mRNA,LmjF.27.1270.2_mRNA;ortholog_cluster=OG0000192;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443|Pfam:PF13423;Ontology_term=GO:0006511,GO:0036459 LTnewLM_27 Pfam protein_match 538221 539195 . + . Parent=LTnewLM_270018200.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_27 Pfam protein_match 538236 538928 . + . Parent=LTnewLM_270018200.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_27 . polypeptide 537807 539207 . + . ID=LTnewLM_270018200.2:pep;Derives_from=LTnewLM_270018200.2;orthologous_to=LTnewLM_270018200.1,LmjF.27.1270.1_mRNA,LmjF.27.1270.2_mRNA;ortholog_cluster=OG0000192;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443|Pfam:PF13423;Ontology_term=GO:0006511,GO:0036459 LTnewLM_27 Pfam protein_match 538221 539195 . + . Parent=LTnewLM_270018200.2:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_27 Pfam protein_match 538236 538928 . + . Parent=LTnewLM_270018200.2:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_27 Liftoff gene 539778 541106 . + . ID=LTnewLM_270018300;coverage=0.997;sequence_ID=0.915;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1275_0 LTnewLM_27 Liftoff mRNA 539778 541106 . + . ID=LTnewLM_270018300.1;Parent=LTnewLM_270018300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 539778 541106 . + 0 ID=LTnewLM_270018300.1:CDS:1;Parent=LTnewLM_270018300.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 539778 541106 . + . ID=LTnewLM_270018300.1:pep;Derives_from=LTnewLM_270018300.1;orthologous_to=LmjF.27.1275_mRNA;ortholog_cluster=OG0003323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 541809 542486 1 + . ID=LTnewLM_270018400 LTnewLM_27 AUGUSTUS mRNA 541809 542486 1 + . ID=LTnewLM_270018400.1;Parent=LTnewLM_270018400 LTnewLM_27 AUGUSTUS CDS 541809 542486 1 + 0 ID=LTnewLM_270018400.1:CDS:1;Parent=LTnewLM_270018400.1 ### LTnewLM_27 . polypeptide 541809 542486 . + . ID=LTnewLM_270018400.1:pep;Derives_from=LTnewLM_270018400.1;orthologous_to=LmjF.27.1280_mRNA;ortholog_cluster=OG0003324;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 543104 544294 1 + . ID=LTnewLM_270018500 LTnewLM_27 AUGUSTUS mRNA 543104 544294 1 + . ID=LTnewLM_270018500.1;Parent=LTnewLM_270018500 LTnewLM_27 AUGUSTUS CDS 543104 544294 1 + 0 ID=LTnewLM_270018500.1:CDS:1;Parent=LTnewLM_270018500.1 ### LTnewLM_27 . polypeptide 543104 544294 . + . ID=LTnewLM_270018500.1:pep;Derives_from=LTnewLM_270018500.1;orthologous_to=LmjF.27.1290_mRNA;ortholog_cluster=OG0003325;product=term%3DLeucine Rich repeat/Leucine Rich Repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516|Pfam:PF00560;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 543668 543730 . + . Parent=LTnewLM_270018500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_27 Pfam protein_match 543749 543814 . + . Parent=LTnewLM_270018500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_27 Pfam protein_match 543833 543895 . + . Parent=LTnewLM_270018500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_27 Pfam protein_match 543842 543931 . + . Parent=LTnewLM_270018500.1:pep;Name=PF00560;signature_desc=Leucine Rich Repeat;Ontology_term=GO:0005515 ### LTnewLM_27 Liftoff gene 545509 545937 . + . ID=LTnewLM_270018600;coverage=1.0;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1295_0 LTnewLM_27 Liftoff mRNA 545509 545937 . + . ID=LTnewLM_270018600.1;Parent=LTnewLM_270018600;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 545509 545937 . + 0 ID=LTnewLM_270018600.1:CDS:1;Parent=LTnewLM_270018600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 545509 545937 . + . ID=LTnewLM_270018600.1:pep;Derives_from=LTnewLM_270018600.1;orthologous_to=LmjF.27.1295_mRNA;ortholog_cluster=OG0003326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 547862 549451 1 + . ID=LTnewLM_270018700 LTnewLM_27 AUGUSTUS mRNA 547862 549451 1 + . ID=LTnewLM_270018700.1;Parent=LTnewLM_270018700 LTnewLM_27 AUGUSTUS CDS 547862 549451 1 + 0 ID=LTnewLM_270018700.1:CDS:1;Parent=LTnewLM_270018700.1 ### LTnewLM_27 . polypeptide 547862 549451 . + . ID=LTnewLM_270018700.1:pep;Derives_from=LTnewLM_270018700.1;orthologous_to=LmjF.27.1300_mRNA;ortholog_cluster=OG0003327;product=term%3DCCCH-type zinc finger/KH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18044|Pfam:PF00013;Ontology_term=GO:0003723 LTnewLM_27 Pfam protein_match 548249 548314 . + . Parent=LTnewLM_270018700.1:pep;Name=PF18044;signature_desc=CCCH-type zinc finger LTnewLM_27 Pfam protein_match 548411 548602 . + . Parent=LTnewLM_270018700.1:pep;Name=PF00013;signature_desc=KH domain;Ontology_term=GO:0003723 ### LTnewLM_27 AUGUSTUS gene 552672 554750 1 + . ID=LTnewLM_270018800 LTnewLM_27 AUGUSTUS mRNA 552672 554750 1 + . ID=LTnewLM_270018800.1;Parent=LTnewLM_270018800 LTnewLM_27 AUGUSTUS CDS 552672 554750 1 + 0 ID=LTnewLM_270018800.1:CDS:1;Parent=LTnewLM_270018800.1 ### LTnewLM_27 . polypeptide 552672 554750 . + . ID=LTnewLM_270018800.1:pep;Derives_from=LTnewLM_270018800.1;orthologous_to=LmjF.27.1310_mRNA;ortholog_cluster=OG0003328;product=term%3DArginyl tRNA synthetase N terminal domain/tRNA synthetases class I (R)/DALR anticodon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03485|Pfam:PF00750|Pfam:PF05746;Ontology_term=GO:0000166,GO:0005737,GO:0005524,GO:0004814,GO:0006420 LTnewLM_27 Pfam protein_match 552711 552962 . + . Parent=LTnewLM_270018800.1:pep;Name=PF03485;signature_desc=Arginyl tRNA synthetase N terminal domain;Ontology_term=GO:0000166,GO:0004814,GO:0005524,GO:0006420,GO:0005737 LTnewLM_27 Pfam protein_match 553011 553565 . + . Parent=LTnewLM_270018800.1:pep;Name=PF00750;signature_desc=tRNA synthetases class I (R);Ontology_term=GO:0004814,GO:0005524,GO:0006420 LTnewLM_27 Pfam protein_match 553815 554357 . + . Parent=LTnewLM_270018800.1:pep;Name=PF00750;signature_desc=tRNA synthetases class I (R);Ontology_term=GO:0004814,GO:0005524,GO:0006420 LTnewLM_27 Pfam protein_match 554400 554744 . + . Parent=LTnewLM_270018800.1:pep;Name=PF05746;signature_desc=DALR anticodon binding domain;Ontology_term=GO:0004814,GO:0005524,GO:0006420 ### LTnewLM_27 AUGUSTUS gene 556123 557916 1 + . ID=LTnewLM_270018900 LTnewLM_27 AUGUSTUS mRNA 556123 557916 1 + . ID=LTnewLM_270018900.1;Parent=LTnewLM_270018900 LTnewLM_27 AUGUSTUS CDS 556123 557916 1 + 0 ID=LTnewLM_270018900.1:CDS:1;Parent=LTnewLM_270018900.1 ### LTnewLM_27 . polypeptide 556123 557916 . + . ID=LTnewLM_270018900.1:pep;Derives_from=LTnewLM_270018900.1;orthologous_to=LmjF.27.1320_mRNA;ortholog_cluster=OG0003329;product=term%3DCupin-like domain/JmjC domain%2C hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13621|Pfam:PF02373 LTnewLM_27 Pfam protein_match 556939 557628 . + . Parent=LTnewLM_270018900.1:pep;Name=PF13621;signature_desc=Cupin-like domain LTnewLM_27 Pfam protein_match 557293 557625 . + . Parent=LTnewLM_270018900.1:pep;Name=PF02373;signature_desc=JmjC domain%2C hydroxylase ### LTnewLM_27 AUGUSTUS gene 559088 560389 1 + . ID=LTnewLM_270019000 LTnewLM_27 AUGUSTUS mRNA 559088 560389 1 + . ID=LTnewLM_270019000.1;Parent=LTnewLM_270019000 LTnewLM_27 AUGUSTUS CDS 559088 560389 1 + 0 ID=LTnewLM_270019000.1:CDS:1;Parent=LTnewLM_270019000.1 ### LTnewLM_27 . polypeptide 559088 560389 . + . ID=LTnewLM_270019000.1:pep;Derives_from=LTnewLM_270019000.1;orthologous_to=LmjF.27.1330_mRNA;ortholog_cluster=OG0003330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 Liftoff gene 563044 564231 . + . ID=LTnewLM_270019100;coverage=1.0;sequence_ID=0.920;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1340_0 LTnewLM_27 Liftoff mRNA 563044 564231 . + . ID=LTnewLM_270019100.1;Parent=LTnewLM_270019100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 563044 564231 . + 0 ID=LTnewLM_270019100.1:CDS:1;Parent=LTnewLM_270019100.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 563044 564231 . + . ID=LTnewLM_270019100.1:pep;Derives_from=LTnewLM_270019100.1;orthologous_to=LmjF.27.1340_mRNA;ortholog_cluster=OG0003331;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 567814 568761 1 + . ID=LTnewLM_270019200 LTnewLM_27 AUGUSTUS mRNA 567814 568761 1 + . ID=LTnewLM_270019200.1;Parent=LTnewLM_270019200 LTnewLM_27 AUGUSTUS CDS 567814 568761 1 + 0 ID=LTnewLM_270019200.1:CDS:1;Parent=LTnewLM_270019200.1 ### LTnewLM_27 . polypeptide 567814 568761 . + . ID=LTnewLM_270019200.1:pep;Derives_from=LTnewLM_270019200.1;orthologous_to=LmjF.27.1350_mRNA;ortholog_cluster=OG0003332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 570528 572588 1 + . ID=LTnewLM_270019300 LTnewLM_27 AUGUSTUS mRNA 570528 572588 1 + . ID=LTnewLM_270019300.1;Parent=LTnewLM_270019300 LTnewLM_27 AUGUSTUS CDS 570528 572588 1 + 0 ID=LTnewLM_270019300.1:CDS:1;Parent=LTnewLM_270019300.1 ### LTnewLM_27 . polypeptide 570528 572588 . + . ID=LTnewLM_270019300.1:pep;Derives_from=LTnewLM_270019300.1;orthologous_to=LmjF.27.1360_mRNA;ortholog_cluster=OG0003333;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 575293 579864 1 + . ID=LTnewLM_270019400 LTnewLM_27 AUGUSTUS mRNA 575293 579864 1 + . ID=LTnewLM_270019400.1;Parent=LTnewLM_270019400 LTnewLM_27 AUGUSTUS CDS 575293 579864 1 + 0 ID=LTnewLM_270019400.1:CDS:1;Parent=LTnewLM_270019400.1 ### LTnewLM_27 . polypeptide 575293 579864 . + . ID=LTnewLM_270019400.1:pep;Derives_from=LTnewLM_270019400.1;orthologous_to=LmjF.27.1370_mRNA;ortholog_cluster=OG0003334;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_27 Pfam protein_match 576907 577665 . + . Parent=LTnewLM_270019400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 576913 577653 . + . Parent=LTnewLM_270019400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 581794 582765 1 + . ID=LTnewLM_270019500 LTnewLM_27 AUGUSTUS mRNA 581794 582765 1 + . ID=LTnewLM_270019500.1;Parent=LTnewLM_270019500 LTnewLM_27 AUGUSTUS CDS 581794 582765 1 + 0 ID=LTnewLM_270019500.1:CDS:1;Parent=LTnewLM_270019500.1 ### LTnewLM_27 . polypeptide 581794 582765 . + . ID=LTnewLM_270019500.1:pep;Derives_from=LTnewLM_270019500.1;orthologous_to=LTnewLM_270019600.1,LmjF.27.1380_mRNA,LmjF.27.1390_mRNA;ortholog_cluster=OG0000193;product=term%3DRibosomal protein L10/Insertion domain in 60S ribosomal protein L10P/60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00466|Pfam:PF17777|Pfam:PF00428;Ontology_term=GO:0003735,GO:0006414,GO:0042254,GO:0005622,GO:0005840 LTnewLM_27 Pfam protein_match 581812 582123 . + . Parent=LTnewLM_270019500.1:pep;Name=PF00466;signature_desc=Ribosomal protein L10;Ontology_term=GO:0042254,GO:0005622 LTnewLM_27 Pfam protein_match 582145 582351 . + . Parent=LTnewLM_270019500.1:pep;Name=PF17777;signature_desc=Insertion domain in 60S ribosomal protein L10P LTnewLM_27 Pfam protein_match 582508 582759 . + . Parent=LTnewLM_270019500.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_27 AUGUSTUS gene 584168 585139 1 + . ID=LTnewLM_270019600 LTnewLM_27 AUGUSTUS mRNA 584168 585139 1 + . ID=LTnewLM_270019600.1;Parent=LTnewLM_270019600 LTnewLM_27 AUGUSTUS CDS 584168 585139 1 + 0 ID=LTnewLM_270019600.1:CDS:1;Parent=LTnewLM_270019600.1 ### LTnewLM_27 . polypeptide 584168 585139 . + . ID=LTnewLM_270019600.1:pep;Derives_from=LTnewLM_270019600.1;orthologous_to=LTnewLM_270019500.1,LmjF.27.1380_mRNA,LmjF.27.1390_mRNA;ortholog_cluster=OG0000193;product=term%3DRibosomal protein L10/Insertion domain in 60S ribosomal protein L10P/60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00466|Pfam:PF17777|Pfam:PF00428;Ontology_term=GO:0003735,GO:0006414,GO:0042254,GO:0005622,GO:0005840 LTnewLM_27 Pfam protein_match 584186 584497 . + . Parent=LTnewLM_270019600.1:pep;Name=PF00466;signature_desc=Ribosomal protein L10;Ontology_term=GO:0042254,GO:0005622 LTnewLM_27 Pfam protein_match 584519 584725 . + . Parent=LTnewLM_270019600.1:pep;Name=PF17777;signature_desc=Insertion domain in 60S ribosomal protein L10P LTnewLM_27 Pfam protein_match 584882 585133 . + . Parent=LTnewLM_270019600.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_27 AUGUSTUS gene 586466 586900 1 + . ID=LTnewLM_270019700 LTnewLM_27 AUGUSTUS mRNA 586466 586900 1 + . ID=LTnewLM_270019700.1;Parent=LTnewLM_270019700 LTnewLM_27 AUGUSTUS CDS 586466 586900 1 + 0 ID=LTnewLM_270019700.1:CDS:1;Parent=LTnewLM_270019700.1 ### LTnewLM_27 . polypeptide 586466 586900 . + . ID=LTnewLM_270019700.1:pep;Derives_from=LTnewLM_270019700.1;orthologous_to=LmjF.27.1400_mRNA;ortholog_cluster=OG0003335;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 588129 589256 1 + . ID=LTnewLM_270019800 LTnewLM_27 AUGUSTUS mRNA 588129 589256 1 + . ID=LTnewLM_270019800.1;Parent=LTnewLM_270019800 LTnewLM_27 AUGUSTUS CDS 588129 589256 1 + 0 ID=LTnewLM_270019800.1:CDS:1;Parent=LTnewLM_270019800.1 ### LTnewLM_27 . polypeptide 588129 589256 . + . ID=LTnewLM_270019800.1:pep;Derives_from=LTnewLM_270019800.1;orthologous_to=LmjF.27.1410_mRNA;ortholog_cluster=OG0003336;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 593399 595318 1 + . ID=LTnewLM_270019900 LTnewLM_27 AUGUSTUS mRNA 593399 595318 1 + . ID=LTnewLM_270019900.1;Parent=LTnewLM_270019900 LTnewLM_27 AUGUSTUS CDS 593399 595318 1 + 0 ID=LTnewLM_270019900.1:CDS:1;Parent=LTnewLM_270019900.1 ### LTnewLM_27 . polypeptide 593399 595318 . + . ID=LTnewLM_270019900.1:pep;Derives_from=LTnewLM_270019900.1;orthologous_to=LmjF.27.1420_mRNA;ortholog_cluster=OG0003337;product=term%3DPhosphotransferase enzyme family/Choline/ethanolamine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01636|Pfam:PF01633 LTnewLM_27 Pfam protein_match 594179 594919 . + . Parent=LTnewLM_270019900.1:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family LTnewLM_27 Pfam protein_match 594245 594955 . + . Parent=LTnewLM_270019900.1:pep;Name=PF01633;signature_desc=Choline/ethanolamine kinase ### LTnewLM_27 AUGUSTUS gene 597537 600254 1 + . ID=LTnewLM_270020000 LTnewLM_27 AUGUSTUS mRNA 597537 600254 1 + . ID=LTnewLM_270020000.1;Parent=LTnewLM_270020000 LTnewLM_27 AUGUSTUS CDS 597537 600254 1 + 0 ID=LTnewLM_270020000.1:CDS:1;Parent=LTnewLM_270020000.1 ### LTnewLM_27 . polypeptide 597537 600254 . + . ID=LTnewLM_270020000.1:pep;Derives_from=LTnewLM_270020000.1;orthologous_to=LmjF.27.1430_mRNA;ortholog_cluster=OG0003338;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 601689 602336 1 + . ID=LTnewLM_270020100 LTnewLM_27 AUGUSTUS mRNA 601689 602336 1 + . ID=LTnewLM_270020100.1;Parent=LTnewLM_270020100 LTnewLM_27 AUGUSTUS CDS 601689 602336 1 + 0 ID=LTnewLM_270020100.1:CDS:1;Parent=LTnewLM_270020100.1 ### LTnewLM_27 . polypeptide 601689 602336 . + . ID=LTnewLM_270020100.1:pep;Derives_from=LTnewLM_270020100.1;orthologous_to=LmjF.27.1440_mRNA;ortholog_cluster=OG0003339;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_27 Pfam protein_match 601746 602216 . + . Parent=LTnewLM_270020100.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_27 AUGUSTUS gene 605283 607841 1 + . ID=LTnewLM_270020200 LTnewLM_27 AUGUSTUS mRNA 605283 607841 1 + . ID=LTnewLM_270020200.1;Parent=LTnewLM_270020200 LTnewLM_27 AUGUSTUS CDS 605283 607841 1 + 0 ID=LTnewLM_270020200.1:CDS:1;Parent=LTnewLM_270020200.1 ### LTnewLM_27 . polypeptide 605283 607841 . + . ID=LTnewLM_270020200.1:pep;Derives_from=LTnewLM_270020200.1;orthologous_to=LmjF.27.1450_mRNA;ortholog_cluster=OG0003340;product=term%3DCBF/Mak21 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03914 LTnewLM_27 Pfam protein_match 606324 606839 . + . Parent=LTnewLM_270020200.1:pep;Name=PF03914;signature_desc=CBF/Mak21 family ### LTnewLM_27 AUGUSTUS gene 609483 610487 1 + . ID=LTnewLM_270020300 LTnewLM_27 AUGUSTUS mRNA 609483 610487 1 + . ID=LTnewLM_270020300.1;Parent=LTnewLM_270020300 LTnewLM_27 AUGUSTUS CDS 609483 610487 1 + 0 ID=LTnewLM_270020300.1:CDS:1;Parent=LTnewLM_270020300.1 ### LTnewLM_27 . polypeptide 609483 610487 . + . ID=LTnewLM_270020300.1:pep;Derives_from=LTnewLM_270020300.1;orthologous_to=LmjF.27.1460_mRNA;ortholog_cluster=OG0003341;product=term%3DPCI domain/Proteasome regulatory subunit C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01399|Pfam:PF08375;Ontology_term=GO:0030234,GO:0005515,GO:0042176,GO:0000502 LTnewLM_27 Pfam protein_match 609945 610247 . + . Parent=LTnewLM_270020300.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 610263 610445 . + . Parent=LTnewLM_270020300.1:pep;Name=PF08375;signature_desc=Proteasome regulatory subunit C-terminal;Ontology_term=GO:0030234,GO:0042176,GO:0000502 ### LTnewLM_27 AUGUSTUS gene 611862 615905 1 + . ID=LTnewLM_270020400 LTnewLM_27 AUGUSTUS mRNA 611862 615905 1 + . ID=LTnewLM_270020400.1;Parent=LTnewLM_270020400 LTnewLM_27 AUGUSTUS CDS 611862 615905 1 + 0 ID=LTnewLM_270020400.1:CDS:1;Parent=LTnewLM_270020400.1 ### LTnewLM_27 . polypeptide 611862 615905 . + . ID=LTnewLM_270020400.1:pep;Derives_from=LTnewLM_270020400.1;orthologous_to=LmjF.27.1480_mRNA;ortholog_cluster=OG0003342;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_27 Pfam protein_match 612939 613286 . + . Parent=LTnewLM_270020400.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_27 AUGUSTUS gene 618207 620300 1 + . ID=LTnewLM_270020500 LTnewLM_27 AUGUSTUS mRNA 618207 620300 1 + . ID=LTnewLM_270020500.1;Parent=LTnewLM_270020500 LTnewLM_27 AUGUSTUS CDS 618207 620300 1 + 0 ID=LTnewLM_270020500.1:CDS:1;Parent=LTnewLM_270020500.1 ### LTnewLM_27 . polypeptide 618207 620300 . + . ID=LTnewLM_270020500.1:pep;Derives_from=LTnewLM_270020500.1;orthologous_to=LmjF.27.1490_mRNA;ortholog_cluster=OG0003343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 622072 622545 1 + . ID=LTnewLM_270020600 LTnewLM_27 AUGUSTUS mRNA 622072 622545 1 + . ID=LTnewLM_270020600.1;Parent=LTnewLM_270020600 LTnewLM_27 AUGUSTUS CDS 622072 622545 1 + 0 ID=LTnewLM_270020600.1:CDS:1;Parent=LTnewLM_270020600.1 ### LTnewLM_27 . polypeptide 622072 622545 . + . ID=LTnewLM_270020600.1:pep;Derives_from=LTnewLM_270020600.1;orthologous_to=LmjF.27.1500_mRNA;ortholog_cluster=OG0003344;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 623759 625318 . + . ID=LTnewLM_270020700:pseudogene;coverage=1.0;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1510_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 623759 625318 . + . ID=LTnewLM_270020700.1;Parent=LTnewLM_270020700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 623759 625318 . + . ID=LTnewLM_270020700.1:pseudogenic_exon:1;Parent=LTnewLM_270020700.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 623759 625318 . + . ID=LTnewLM_270020700.1:pep;Derives_from=LTnewLM_270020700.1;orthologous_to=LmjF.27.1510_mRNA;ortholog_cluster=OG0007561;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 625979 628210 1 + . ID=LTnewLM_270020800 LTnewLM_27 AUGUSTUS mRNA 625979 628210 1 + . ID=LTnewLM_270020800.1;Parent=LTnewLM_270020800 LTnewLM_27 AUGUSTUS CDS 625979 628210 1 + 0 ID=LTnewLM_270020800.1:CDS:1;Parent=LTnewLM_270020800.1 ### LTnewLM_27 . polypeptide 625979 628210 . + . ID=LTnewLM_270020800.1:pep;Derives_from=LTnewLM_270020800.1;orthologous_to=LmjF.27.1520_mRNA;ortholog_cluster=OG0003345;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 629934 630263 1 + . ID=LTnewLM_270020900 LTnewLM_27 AUGUSTUS mRNA 629934 630263 1 + . ID=LTnewLM_270020900.1;Parent=LTnewLM_270020900 LTnewLM_27 AUGUSTUS CDS 629934 630263 1 + 0 ID=LTnewLM_270020900.1:CDS:1;Parent=LTnewLM_270020900.1 ### LTnewLM_27 . polypeptide 629934 630263 . + . ID=LTnewLM_270020900.1:pep;Derives_from=LTnewLM_270020900.1;orthologous_to=LmjF.27.1530_mRNA;ortholog_cluster=OG0003346;product=term%3DDomain of unknown function (DUF543)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04418 LTnewLM_27 Pfam protein_match 629952 630164 . + . Parent=LTnewLM_270020900.1:pep;Name=PF04418;signature_desc=Domain of unknown function (DUF543) ### LTnewLM_27 . polypeptide 631524 631803 . + . ID=LTnewLM_270021000.1:pep;Derives_from=LTnewLM_270021000.1;orthologous_to=LTnewLM_270021000.2,LmjF.27.1540_mRNA;ortholog_cluster=OG0000407;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 631524 632288 2 + . ID=LTnewLM_270021000 LTnewLM_27 AUGUSTUS mRNA 631524 631803 1 + . ID=LTnewLM_270021000.1;Parent=LTnewLM_270021000 LTnewLM_27 AUGUSTUS CDS 631524 631721 1 + 0 ID=LTnewLM_270021000.1:CDS:1;Parent=LTnewLM_270021000.1 LTnewLM_27 AUGUSTUS CDS 631786 631803 1 + 0 ID=LTnewLM_270021000.1:CDS:2;Parent=LTnewLM_270021000.1 LTnewLM_27 AUGUSTUS mRNA 631524 632288 1 + . ID=LTnewLM_270021000.2;Parent=LTnewLM_270021000 LTnewLM_27 AUGUSTUS CDS 631524 632288 1 + 0 ID=LTnewLM_270021000.2:CDS:1;Parent=LTnewLM_270021000.2 ### LTnewLM_27 . polypeptide 631524 632288 . + . ID=LTnewLM_270021000.2:pep;Derives_from=LTnewLM_270021000.2;orthologous_to=LTnewLM_270021000.1,LmjF.27.1540_mRNA;ortholog_cluster=OG0000407;product=term%3DGNAT acetyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12746 LTnewLM_27 Pfam protein_match 631560 632264 . + . Parent=LTnewLM_270021000.2:pep;Name=PF12746;signature_desc=GNAT acetyltransferase ### LTnewLM_27 . pseudogene 632571 633674 . + . ID=LTnewLM_270021100:pseudogene;coverage=0.968;sequence_ID=0.905;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1550_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 632571 633674 . + . ID=LTnewLM_270021100.1;Parent=LTnewLM_270021100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 632961 633674 . + . ID=LTnewLM_270021100.1:pseudogenic_exon:1;Parent=LTnewLM_270021100.1;extra_copy_number=0 LTnewLM_27 . pseudogenic_transcript 633103 633674 . + . ID=LTnewLM_270021100.2;Parent=LTnewLM_270021100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 633270 633674 . + . ID=LTnewLM_270021100.2:pseudogenic_exon:1;Parent=LTnewLM_270021100.2;extra_copy_number=0 ### LTnewLM_27 . polypeptide 632961 633674 . + . ID=LTnewLM_270021100.1:pep;Derives_from=LTnewLM_270021100.1;orthologous_to=LmjF.27.1550.1_mRNA;ortholog_cluster=OG0007562;product=term%3DRNA polymerase Rpb3/Rpb11 dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13656|Pfam:PF01193;Ontology_term=GO:0006351,GO:0046983 LTnewLM_27 Pfam protein_match 633390 633623 . + . Parent=LTnewLM_270021100.1:pep;Name=PF13656;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain LTnewLM_27 Pfam protein_match 633393 633584 . + . Parent=LTnewLM_270021100.1:pep;Name=PF01193;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain;Ontology_term=GO:0046983,GO:0006351 ### LTnewLM_27 . polypeptide 633270 633674 . + . ID=LTnewLM_270021100.2:pep;Derives_from=LTnewLM_270021100.2;orthologous_to=LmjF.27.1550.2_mRNA;ortholog_cluster=OG0007563;product=term%3DRNA polymerase Rpb3/Rpb11 dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13656|Pfam:PF01193;Ontology_term=GO:0006351,GO:0046983 LTnewLM_27 Pfam protein_match 633390 633623 . + . Parent=LTnewLM_270021100.2:pep;Name=PF13656;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain LTnewLM_27 Pfam protein_match 633393 633584 . + . Parent=LTnewLM_270021100.2:pep;Name=PF01193;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain;Ontology_term=GO:0046983,GO:0006351 ### LTnewLM_27 Liftoff gene 636295 641175 . + . ID=LTnewLM_270021200;coverage=0.999;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1560_0 LTnewLM_27 Liftoff mRNA 636295 641175 . + . ID=LTnewLM_270021200.1;Parent=LTnewLM_270021200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 636295 641175 . + 0 ID=LTnewLM_270021200.1:CDS:1;Parent=LTnewLM_270021200.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 636295 641175 . + . ID=LTnewLM_270021200.1:pep;Derives_from=LTnewLM_270021200.1;orthologous_to=LmjF.27.1560_mRNA;ortholog_cluster=OG0003347;product=term%3DDiacylglycerol acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03982;Ontology_term=GO:0016747 LTnewLM_27 Pfam protein_match 640315 641070 . + . Parent=LTnewLM_270021200.1:pep;Name=PF03982;signature_desc=Diacylglycerol acyltransferase;Ontology_term=GO:0016747 ### LTnewLM_27 AUGUSTUS gene 642437 643743 0.92 + . ID=LTnewLM_270021300 LTnewLM_27 AUGUSTUS mRNA 642437 643743 0.92 + . ID=LTnewLM_270021300.1;Parent=LTnewLM_270021300 LTnewLM_27 AUGUSTUS CDS 642437 643456 1 + 0 ID=LTnewLM_270021300.1:CDS:1;Parent=LTnewLM_270021300.1 LTnewLM_27 AUGUSTUS CDS 643525 643743 0.92 + 0 ID=LTnewLM_270021300.1:CDS:2;Parent=LTnewLM_270021300.1 ### LTnewLM_27 . polypeptide 642437 643743 . + . ID=LTnewLM_270021300.1:pep;Derives_from=LTnewLM_270021300.1;orthologous_to=LTnewLM_270021600.1,LmjF.27.1570_mRNA;ortholog_cluster=OG0000408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 644496 645941 1 + . ID=LTnewLM_270021400 LTnewLM_27 AUGUSTUS mRNA 644496 645941 1 + . ID=LTnewLM_270021400.1;Parent=LTnewLM_270021400 LTnewLM_27 AUGUSTUS CDS 644496 645941 1 + 0 ID=LTnewLM_270021400.1:CDS:1;Parent=LTnewLM_270021400.1 ### LTnewLM_27 . polypeptide 644496 645941 . + . ID=LTnewLM_270021400.1:pep;Derives_from=LTnewLM_270021400.1;orthologous_to=LTnewLM_270021700.1,LmjF.27.1580_mRNA;ortholog_cluster=OG0000409;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_27 Pfam protein_match 644724 645920 . + . Parent=LTnewLM_270021400.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_27 Pfam protein_match 644745 645218 . + . Parent=LTnewLM_270021400.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_27 AUGUSTUS gene 650197 651276 0.73 + . ID=LTnewLM_270021500 LTnewLM_27 AUGUSTUS mRNA 650197 651276 0.73 + . ID=LTnewLM_270021500.1;Parent=LTnewLM_270021500 LTnewLM_27 AUGUSTUS CDS 650197 651276 0.73 + 0 ID=LTnewLM_270021500.1:CDS:1;Parent=LTnewLM_270021500.1 ### LTnewLM_27 . polypeptide 650197 651276 . + . ID=LTnewLM_270021500.1:pep;Derives_from=LTnewLM_270021500.1;orthologous_to=LmjF.27.1590_mRNA;ortholog_cluster=OG0003348;product=term%3DDiacylglycerol acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03982;Ontology_term=GO:0016747 LTnewLM_27 Pfam protein_match 650413 651171 . + . Parent=LTnewLM_270021500.1:pep;Name=PF03982;signature_desc=Diacylglycerol acyltransferase;Ontology_term=GO:0016747 ### LTnewLM_27 AUGUSTUS gene 652540 653849 0.73 + . ID=LTnewLM_270021600 LTnewLM_27 AUGUSTUS mRNA 652540 653849 0.73 + . ID=LTnewLM_270021600.1;Parent=LTnewLM_270021600 LTnewLM_27 AUGUSTUS CDS 652540 653562 1 + 0 ID=LTnewLM_270021600.1:CDS:1;Parent=LTnewLM_270021600.1 LTnewLM_27 AUGUSTUS CDS 653631 653849 0.73 + 0 ID=LTnewLM_270021600.1:CDS:2;Parent=LTnewLM_270021600.1 ### LTnewLM_27 . polypeptide 652540 653849 . + . ID=LTnewLM_270021600.1:pep;Derives_from=LTnewLM_270021600.1;orthologous_to=LTnewLM_270021300.1,LmjF.27.1570_mRNA;ortholog_cluster=OG0000408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 654590 656035 1 + . ID=LTnewLM_270021700 LTnewLM_27 AUGUSTUS mRNA 654590 656035 1 + . ID=LTnewLM_270021700.1;Parent=LTnewLM_270021700 LTnewLM_27 AUGUSTUS CDS 654590 656035 1 + 0 ID=LTnewLM_270021700.1:CDS:1;Parent=LTnewLM_270021700.1 ### LTnewLM_27 . polypeptide 654590 656035 . + . ID=LTnewLM_270021700.1:pep;Derives_from=LTnewLM_270021700.1;orthologous_to=LTnewLM_270021400.1,LmjF.27.1580_mRNA;ortholog_cluster=OG0000409;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_27 Pfam protein_match 654818 656014 . + . Parent=LTnewLM_270021700.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_27 Pfam protein_match 654839 655312 . + . Parent=LTnewLM_270021700.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_27 . pseudogene 661685 662480 . + . ID=LTnewLM_270021800:pseudogene;coverage=1.0;sequence_ID=0.910;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1600_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 661685 662480 . + . ID=LTnewLM_270021800.1;Parent=LTnewLM_270021800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 661685 662480 . + . ID=LTnewLM_270021800.1:pseudogenic_exon:1;Parent=LTnewLM_270021800.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 661685 662480 . + . ID=LTnewLM_270021800.1:pep;Derives_from=LTnewLM_270021800.1;orthologous_to=LmjF.27.1600_mRNA;ortholog_cluster=OG0007564;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 663025 664829 . + . ID=LTnewLM_270021900:pseudogene;coverage=0.917;sequence_ID=0.816;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.1605_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 663025 664829 . + . ID=LTnewLM_270021900.1;Parent=LTnewLM_270021900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 663956 664829 . + . ID=LTnewLM_270021900.1:pseudogenic_exon:1;Parent=LTnewLM_270021900.1;extra_copy_number=0 LTnewLM_27 . pseudogenic_transcript 664525 664829 . + . ID=LTnewLM_270021900.2;Parent=LTnewLM_270021900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 664656 664829 . + . ID=LTnewLM_270021900.2:pseudogenic_exon:1;Parent=LTnewLM_270021900.2;extra_copy_number=0 ### LTnewLM_27 . polypeptide 663956 664829 . + . ID=LTnewLM_270021900.1:pep;Derives_from=LTnewLM_270021900.1;orthologous_to=LmjF.27.1605.1_mRNA,LmjF.27.1605.2_mRNA;ortholog_cluster=OG0000530;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 664656 664829 . + . ID=LTnewLM_270021900.2:pep;Derives_from=LTnewLM_270021900.2;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 671034 671675 1 + . ID=LTnewLM_270022000 LTnewLM_27 AUGUSTUS mRNA 671034 671675 1 + . ID=LTnewLM_270022000.1;Parent=LTnewLM_270022000 LTnewLM_27 AUGUSTUS CDS 671034 671675 1 + 0 ID=LTnewLM_270022000.1:CDS:1;Parent=LTnewLM_270022000.1 ### LTnewLM_27 . polypeptide 671034 671675 . + . ID=LTnewLM_270022000.1:pep;Derives_from=LTnewLM_270022000.1;orthologous_to=LmjF.27.1620_mRNA;ortholog_cluster=OG0003349;product=term%3DEukaryotic initiation factor 4E%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01652;Ontology_term=GO:0003723,GO:0005737,GO:0006413,GO:0003743 LTnewLM_27 Pfam protein_match 671082 671630 . + . Parent=LTnewLM_270022000.1:pep;Name=PF01652;signature_desc=Eukaryotic initiation factor 4E;Ontology_term=GO:0003723,GO:0003743,GO:0006413,GO:0005737 ### LTnewLM_27 AUGUSTUS gene 672537 672872 1 + . ID=LTnewLM_270022100 LTnewLM_27 AUGUSTUS mRNA 672537 672872 1 + . ID=LTnewLM_270022100.1;Parent=LTnewLM_270022100 LTnewLM_27 AUGUSTUS CDS 672537 672872 1 + 0 ID=LTnewLM_270022100.1:CDS:1;Parent=LTnewLM_270022100.1 ### LTnewLM_27 . polypeptide 672537 672872 . + . ID=LTnewLM_270022100.1:pep;Derives_from=LTnewLM_270022100.1;orthologous_to=LTnewLM_190019200.1,LTnewLM_230013500.1,LTnewLM_230013500.2,LTnewLM_350016500.1,LTnewLM_360029300.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 676054 678579 1 + . ID=LTnewLM_270022200 LTnewLM_27 AUGUSTUS mRNA 676054 678579 1 + . ID=LTnewLM_270022200.1;Parent=LTnewLM_270022200 LTnewLM_27 AUGUSTUS CDS 676054 678579 1 + 0 ID=LTnewLM_270022200.1:CDS:1;Parent=LTnewLM_270022200.1 ### LTnewLM_27 . polypeptide 676054 678579 . + . ID=LTnewLM_270022200.1:pep;Derives_from=LTnewLM_270022200.1;orthologous_to=LmjF.27.1630_mRNA;ortholog_cluster=OG0003350;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 680304 683051 1 + . ID=LTnewLM_270022300 LTnewLM_27 AUGUSTUS mRNA 680304 683051 1 + . ID=LTnewLM_270022300.1;Parent=LTnewLM_270022300 LTnewLM_27 AUGUSTUS CDS 680304 683051 1 + 0 ID=LTnewLM_270022300.1:CDS:1;Parent=LTnewLM_270022300.1 ### LTnewLM_27 . polypeptide 680304 683051 . + . ID=LTnewLM_270022300.1:pep;Derives_from=LTnewLM_270022300.1;orthologous_to=LmjF.27.1640_mRNA;ortholog_cluster=OG0003351;product=term%3DBRO1-like domain/ALIX V-shaped domain binding to HIV%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03097|Pfam:PF13949;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 680346 681512 . + . Parent=LTnewLM_270022300.1:pep;Name=PF03097;signature_desc=BRO1-like domain LTnewLM_27 Pfam protein_match 681633 682541 . + . Parent=LTnewLM_270022300.1:pep;Name=PF13949;signature_desc=ALIX V-shaped domain binding to HIV;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 685591 689463 1 + . ID=LTnewLM_270022400 LTnewLM_27 AUGUSTUS mRNA 685591 689463 1 + . ID=LTnewLM_270022400.1;Parent=LTnewLM_270022400 LTnewLM_27 AUGUSTUS CDS 685591 689463 1 + 0 ID=LTnewLM_270022400.1:CDS:1;Parent=LTnewLM_270022400.1 ### LTnewLM_27 . polypeptide 685591 689463 . + . ID=LTnewLM_270022400.1:pep;Derives_from=LTnewLM_270022400.1;orthologous_to=LmjF.27.1650_mRNA;ortholog_cluster=OG0003352;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 690194 694072 1 + . ID=LTnewLM_270022500 LTnewLM_27 AUGUSTUS mRNA 690194 694072 1 + . ID=LTnewLM_270022500.1;Parent=LTnewLM_270022500 LTnewLM_27 AUGUSTUS CDS 690194 694072 1 + 0 ID=LTnewLM_270022500.1:CDS:1;Parent=LTnewLM_270022500.1 ### LTnewLM_27 . polypeptide 690194 694072 . + . ID=LTnewLM_270022500.1:pep;Derives_from=LTnewLM_270022500.1;orthologous_to=LmjF.27.1660_mRNA;ortholog_cluster=OG0003353;product=term%3DHereditary spastic paraplegia protein strumpellin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10266;Ontology_term=GO:0071203 LTnewLM_27 Pfam protein_match 690305 693871 . + . Parent=LTnewLM_270022500.1:pep;Name=PF10266;signature_desc=Hereditary spastic paraplegia protein strumpellin;Ontology_term=GO:0071203 ### LTnewLM_27 AUGUSTUS gene 695252 696643 1 + . ID=LTnewLM_270022600 LTnewLM_27 AUGUSTUS mRNA 695252 696643 1 + . ID=LTnewLM_270022600.1;Parent=LTnewLM_270022600 LTnewLM_27 AUGUSTUS CDS 695252 696643 1 + 0 ID=LTnewLM_270022600.1:CDS:1;Parent=LTnewLM_270022600.1 ### LTnewLM_27 . polypeptide 695252 696643 . + . ID=LTnewLM_270022600.1:pep;Derives_from=LTnewLM_270022600.1;orthologous_to=LmjF.27.1670_mRNA;ortholog_cluster=OG0003354;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_27 Pfam protein_match 695342 696040 . + . Parent=LTnewLM_270022600.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_27 AUGUSTUS gene 698452 698652 1 + . ID=LTnewLM_270022700 LTnewLM_27 AUGUSTUS mRNA 698452 698652 1 + . ID=LTnewLM_270022700.1;Parent=LTnewLM_270022700 LTnewLM_27 AUGUSTUS CDS 698452 698652 1 + 0 ID=LTnewLM_270022700.1:CDS:1;Parent=LTnewLM_270022700.1 ### LTnewLM_27 . polypeptide 698452 698652 . + . ID=LTnewLM_270022700.1:pep;Derives_from=LTnewLM_270022700.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 699060 699350 1 + . ID=LTnewLM_270022800 LTnewLM_27 AUGUSTUS mRNA 699060 699350 1 + . ID=LTnewLM_270022800.1;Parent=LTnewLM_270022800 LTnewLM_27 AUGUSTUS CDS 699060 699350 1 + 0 ID=LTnewLM_270022800.1:CDS:1;Parent=LTnewLM_270022800.1 ### LTnewLM_27 . polypeptide 699060 699350 . + . ID=LTnewLM_270022800.1:pep;Derives_from=LTnewLM_270022800.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 701070 702683 1 + . ID=LTnewLM_270022900 LTnewLM_27 AUGUSTUS mRNA 701070 702683 1 + . ID=LTnewLM_270022900.1;Parent=LTnewLM_270022900 LTnewLM_27 AUGUSTUS CDS 701070 702683 1 + 0 ID=LTnewLM_270022900.1:CDS:1;Parent=LTnewLM_270022900.1 ### LTnewLM_27 . polypeptide 701070 702683 . + . ID=LTnewLM_270022900.1:pep;Derives_from=LTnewLM_270022900.1;orthologous_to=LmjF.27.1680_mRNA;ortholog_cluster=OG0003355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 709423 711273 1 + . ID=LTnewLM_270023000 LTnewLM_27 AUGUSTUS mRNA 709423 711273 1 + . ID=LTnewLM_270023000.1;Parent=LTnewLM_270023000 LTnewLM_27 AUGUSTUS CDS 709423 711273 1 + 0 ID=LTnewLM_270023000.1:CDS:1;Parent=LTnewLM_270023000.1 ### LTnewLM_27 . polypeptide 709423 711273 . + . ID=LTnewLM_270023000.1:pep;Derives_from=LTnewLM_270023000.1;orthologous_to=LmjF.27.1690_mRNA;ortholog_cluster=OG0003356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 713776 716103 1.9 + . ID=LTnewLM_270023100 LTnewLM_27 AUGUSTUS mRNA 713776 716103 0.91 + . ID=LTnewLM_270023100.1;Parent=LTnewLM_270023100 LTnewLM_27 AUGUSTUS CDS 713776 716103 0.91 + 0 ID=LTnewLM_270023100.1:CDS:1;Parent=LTnewLM_270023100.1 LTnewLM_27 AUGUSTUS mRNA 714757 716103 0.99 + . ID=LTnewLM_270023100.2;Parent=LTnewLM_270023100 LTnewLM_27 AUGUSTUS CDS 714757 716103 0.99 + 0 ID=LTnewLM_270023100.2:CDS:1;Parent=LTnewLM_270023100.2 ### LTnewLM_27 . polypeptide 713776 716103 . + . ID=LTnewLM_270023100.1:pep;Derives_from=LTnewLM_270023100.1;orthologous_to=LTnewLM_270023100.2,LmjF.27.1700_mRNA;ortholog_cluster=OG0000410;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 714757 716103 . + . ID=LTnewLM_270023100.2:pep;Derives_from=LTnewLM_270023100.2;orthologous_to=LTnewLM_270023100.1,LmjF.27.1700_mRNA;ortholog_cluster=OG0000410;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 717151 718512 1 + . ID=LTnewLM_270023200 LTnewLM_27 AUGUSTUS mRNA 717151 718512 1 + . ID=LTnewLM_270023200.1;Parent=LTnewLM_270023200 LTnewLM_27 AUGUSTUS CDS 717151 718512 1 + 0 ID=LTnewLM_270023200.1:CDS:1;Parent=LTnewLM_270023200.1 ### LTnewLM_27 . polypeptide 717151 718512 . + . ID=LTnewLM_270023200.1:pep;Derives_from=LTnewLM_270023200.1;product=term%3DeRF1 domain 1/Bacterial archaeo-eukaryotic release factor family 10/eRF1 domain 2/Actinobacteria/chloroflexi VLRF1 release factor/eRF1 domain 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03463|Pfam:PF18854|Pfam:PF03464|Pfam:PF18859|Pfam:PF03465 LTnewLM_27 Pfam protein_match 717214 717570 . + . Parent=LTnewLM_270023200.1:pep;Name=PF03463;signature_desc=eRF1 domain 1 LTnewLM_27 Pfam protein_match 717553 717927 . + . Parent=LTnewLM_270023200.1:pep;Name=PF18854;signature_desc=Bacterial archaeo-eukaryotic release factor family 10 LTnewLM_27 Pfam protein_match 717589 717981 . + . Parent=LTnewLM_270023200.1:pep;Name=PF03464;signature_desc=eRF1 domain 2 LTnewLM_27 Pfam protein_match 717673 717960 . + . Parent=LTnewLM_270023200.1:pep;Name=PF18859;signature_desc=Actinobacteria/chloroflexi VLRF1 release factor LTnewLM_27 Pfam protein_match 717994 718410 . + . Parent=LTnewLM_270023200.1:pep;Name=PF03465;signature_desc=eRF1 domain 3 ### LTnewLM_27 AUGUSTUS gene 719305 720875 0.68 + . ID=LTnewLM_270023300 LTnewLM_27 AUGUSTUS mRNA 719305 720875 0.68 + . ID=LTnewLM_270023300.1;Parent=LTnewLM_270023300 LTnewLM_27 AUGUSTUS CDS 719305 719317 0.7 + 0 ID=LTnewLM_270023300.1:CDS:1;Parent=LTnewLM_270023300.1 LTnewLM_27 AUGUSTUS CDS 720343 720875 0.74 + 2 ID=LTnewLM_270023300.1:CDS:2;Parent=LTnewLM_270023300.1 ### LTnewLM_27 . polypeptide 719305 720875 . + . ID=LTnewLM_270023300.1:pep;Derives_from=LTnewLM_270023300.1;orthologous_to=LTnewLM_200006000.1,LTnewLM_200006100.1,LTnewLM_200006100.2,LmjF.20.0100_mRNA,LmjF.20.0110.1_mRNA,LmjF.20.0110.2_mRNA;ortholog_cluster=OG0000040;product=term%3DPhosphoglycerate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00162;Ontology_term=GO:0006096,GO:0004618 LTnewLM_27 Pfam protein_match 719362 719544 . + . Parent=LTnewLM_270023300.1:pep;Name=PF00162;signature_desc=Phosphoglycerate kinase;Ontology_term=GO:0004618,GO:0006096 ### LTnewLM_27 AUGUSTUS gene 720997 721331 0.47 + . ID=LTnewLM_270023400 LTnewLM_27 AUGUSTUS mRNA 720997 721331 0.47 + . ID=LTnewLM_270023400.1;Parent=LTnewLM_270023400 LTnewLM_27 AUGUSTUS CDS 720997 721142 0.54 + 0 ID=LTnewLM_270023400.1:CDS:1;Parent=LTnewLM_270023400.1 LTnewLM_27 AUGUSTUS CDS 721214 721331 0.47 + 1 ID=LTnewLM_270023400.1:CDS:2;Parent=LTnewLM_270023400.1 ### LTnewLM_27 . polypeptide 720997 721331 . + . ID=LTnewLM_270023400.1:pep;Derives_from=LTnewLM_270023400.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 722524 723543 1 + . ID=LTnewLM_270023500 LTnewLM_27 AUGUSTUS mRNA 722524 723543 1 + . ID=LTnewLM_270023500.1;Parent=LTnewLM_270023500 LTnewLM_27 AUGUSTUS CDS 722524 723543 1 + 0 ID=LTnewLM_270023500.1:CDS:1;Parent=LTnewLM_270023500.1 ### LTnewLM_27 . polypeptide 722524 723543 . + . ID=LTnewLM_270023500.1:pep;Derives_from=LTnewLM_270023500.1;orthologous_to=LmjF.27.1730_mRNA;ortholog_cluster=OG0003357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 727074 727370 . - . ID=LTnewLM_270023600:pseudogene;coverage=0.99;sequence_ID=0.91;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1740_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 727074 727370 . - . ID=LTnewLM_270023600.1;Parent=LTnewLM_270023600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 727074 727370 . - . ID=LTnewLM_270023600.1:pseudogenic_exon:1;Parent=LTnewLM_270023600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 727074 727370 . - . ID=LTnewLM_270023600.1:pep;Derives_from=LTnewLM_270023600.1;orthologous_to=LTnewLM_170007200.1,LmjF.27.1740_mRNA;ortholog_cluster=OG0000516;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 728977 742346 . - . ID=LTnewLM_270023700:pseudogene;coverage=0.999;sequence_ID=0.961;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1750_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 728977 742346 . - . ID=LTnewLM_270023700.1;Parent=LTnewLM_270023700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 728977 742346 . - . ID=LTnewLM_270023700.1:pseudogenic_exon:1;Parent=LTnewLM_270023700.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 728977 742346 . - . ID=LTnewLM_270023700.1:pep;Derives_from=LTnewLM_270023700.1;orthologous_to=LTnewLM_340048700.1,LmjF.27.1750_mRNA,LmjF.34.4160_mRNA;ortholog_cluster=OG0000243;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/P-loop containing dynein motor region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF12775;Ontology_term=GO:0016887,GO:0005524 LTnewLM_27 Pfam protein_match 734619 735125 . - . Parent=LTnewLM_270023700.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_27 Pfam protein_match 735579 735986 . - . Parent=LTnewLM_270023700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 735951 736964 . - . Parent=LTnewLM_270023700.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_27 Pfam protein_match 737346 738647 . - . Parent=LTnewLM_270023700.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 ### LTnewLM_27 AUGUSTUS gene 745572 747287 1 - . ID=LTnewLM_270023800 LTnewLM_27 AUGUSTUS mRNA 745572 747287 1 - . ID=LTnewLM_270023800.1;Parent=LTnewLM_270023800 LTnewLM_27 AUGUSTUS CDS 745572 747287 1 - 0 ID=LTnewLM_270023800.1:CDS:1;Parent=LTnewLM_270023800.1 ### LTnewLM_27 . polypeptide 745572 747287 . - . ID=LTnewLM_270023800.1:pep;Derives_from=LTnewLM_270023800.1;orthologous_to=LmjF.27.1760_mRNA;ortholog_cluster=OG0003358;product=term%3DTubulin binding cofactor C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07986 LTnewLM_27 Pfam protein_match 746094 746336 . - . Parent=LTnewLM_270023800.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C ### LTnewLM_27 . pseudogene 750478 754977 . - . ID=LTnewLM_270023900:pseudogene;coverage=0.998;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1770_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 750478 754977 . - . ID=LTnewLM_270023900.1;Parent=LTnewLM_270023900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 750478 754977 . - . ID=LTnewLM_270023900.1:pseudogenic_exon:1;Parent=LTnewLM_270023900.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 750478 754977 . - . ID=LTnewLM_270023900.1:pep;Derives_from=LTnewLM_270023900.1;orthologous_to=LmjF.27.1770_mRNA;ortholog_cluster=OG0007565;product=term%3DFrag1/DRAM/Sfk1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10277 LTnewLM_27 Pfam protein_match 753901 754623 . - . Parent=LTnewLM_270023900.1:pep;Name=PF10277;signature_desc=Frag1/DRAM/Sfk1 family ### LTnewLM_27 AUGUSTUS gene 760455 762161 1 - . ID=LTnewLM_270024000 LTnewLM_27 AUGUSTUS mRNA 760455 762161 1 - . ID=LTnewLM_270024000.1;Parent=LTnewLM_270024000 LTnewLM_27 AUGUSTUS CDS 760455 762161 1 - 0 ID=LTnewLM_270024000.1:CDS:1;Parent=LTnewLM_270024000.1 ### LTnewLM_27 . polypeptide 760455 762161 . - . ID=LTnewLM_270024000.1:pep;Derives_from=LTnewLM_270024000.1;orthologous_to=LmjF.27.1780_mRNA;ortholog_cluster=OG0003359;product=term%3DProtein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain/Fungal protein kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF03109|Pfam:PF17667|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 761076 761531 . - . Parent=LTnewLM_270024000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 761118 761666 . - . Parent=LTnewLM_270024000.1:pep;Name=PF17667;signature_desc=Fungal protein kinase LTnewLM_27 Pfam protein_match 761256 761828 . - . Parent=LTnewLM_270024000.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain LTnewLM_27 Pfam protein_match 761256 761843 . - . Parent=LTnewLM_270024000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 765319 768456 1.59 - . ID=LTnewLM_270024100 LTnewLM_27 AUGUSTUS mRNA 765319 768456 1 - . ID=LTnewLM_270024100.1;Parent=LTnewLM_270024100 LTnewLM_27 AUGUSTUS CDS 765319 768456 1 - 0 ID=LTnewLM_270024100.1:CDS:1;Parent=LTnewLM_270024100.1 LTnewLM_27 AUGUSTUS mRNA 765888 768456 0.59 - . ID=LTnewLM_270024100.2;Parent=LTnewLM_270024100 LTnewLM_27 AUGUSTUS CDS 765888 765899 0.59 - 0 ID=LTnewLM_270024100.2:CDS:1;Parent=LTnewLM_270024100.2 LTnewLM_27 AUGUSTUS CDS 766000 768456 0.59 - 0 ID=LTnewLM_270024100.2:CDS:2;Parent=LTnewLM_270024100.2 ### LTnewLM_27 . polypeptide 765319 768456 . - . ID=LTnewLM_270024100.1:pep;Derives_from=LTnewLM_270024100.1;orthologous_to=LTnewLM_270024100.2,LmjF.27.1790_mRNA;ortholog_cluster=OG0000411;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 765888 768456 . - . ID=LTnewLM_270024100.2:pep;Derives_from=LTnewLM_270024100.2;orthologous_to=LTnewLM_270024100.1,LmjF.27.1790_mRNA;ortholog_cluster=OG0000411;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 772315 777531 1 - . ID=LTnewLM_270024200 LTnewLM_27 AUGUSTUS mRNA 772315 777531 1 - . ID=LTnewLM_270024200.1;Parent=LTnewLM_270024200 LTnewLM_27 AUGUSTUS CDS 772315 777531 1 - 0 ID=LTnewLM_270024200.1:CDS:1;Parent=LTnewLM_270024200.1 ### LTnewLM_27 . polypeptide 772315 777531 . - . ID=LTnewLM_270024200.1:pep;Derives_from=LTnewLM_270024200.1;orthologous_to=LmjF.27.1800_mRNA;ortholog_cluster=OG0003360;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_27 Pfam protein_match 776554 777474 . - . Parent=LTnewLM_270024200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 776806 777465 . - . Parent=LTnewLM_270024200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 780396 781973 1 - . ID=LTnewLM_270024300 LTnewLM_27 AUGUSTUS mRNA 780396 781973 1 - . ID=LTnewLM_270024300.1;Parent=LTnewLM_270024300 LTnewLM_27 AUGUSTUS CDS 780396 781973 1 - 0 ID=LTnewLM_270024300.1:CDS:1;Parent=LTnewLM_270024300.1 ### LTnewLM_27 . polypeptide 780396 781973 . - . ID=LTnewLM_270024300.1:pep;Derives_from=LTnewLM_270024300.1;orthologous_to=LTnewLM_270024400.1,LmjF.27.1805_mRNA,LmjF.27.1810_mRNA;ortholog_cluster=OG0000194;product=term%3DPhosphoenolpyruvate carboxykinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01293;Ontology_term=GO:0004612,GO:0006094,GO:0005524 LTnewLM_27 Pfam protein_match 780567 781961 . - . Parent=LTnewLM_270024300.1:pep;Name=PF01293;signature_desc=Phosphoenolpyruvate carboxykinase;Ontology_term=GO:0004612,GO:0005524,GO:0006094 ### LTnewLM_27 AUGUSTUS gene 784638 786215 1 - . ID=LTnewLM_270024400 LTnewLM_27 AUGUSTUS mRNA 784638 786215 1 - . ID=LTnewLM_270024400.1;Parent=LTnewLM_270024400 LTnewLM_27 AUGUSTUS CDS 784638 786215 1 - 0 ID=LTnewLM_270024400.1:CDS:1;Parent=LTnewLM_270024400.1 ### LTnewLM_27 . polypeptide 784638 786215 . - . ID=LTnewLM_270024400.1:pep;Derives_from=LTnewLM_270024400.1;orthologous_to=LTnewLM_270024300.1,LmjF.27.1805_mRNA,LmjF.27.1810_mRNA;ortholog_cluster=OG0000194;product=term%3DPhosphoenolpyruvate carboxykinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01293;Ontology_term=GO:0004612,GO:0006094,GO:0005524 LTnewLM_27 Pfam protein_match 784809 786203 . - . Parent=LTnewLM_270024400.1:pep;Name=PF01293;signature_desc=Phosphoenolpyruvate carboxykinase;Ontology_term=GO:0004612,GO:0005524,GO:0006094 ### LTnewLM_27 AUGUSTUS gene 788516 796930 1 - . ID=LTnewLM_270024500 LTnewLM_27 AUGUSTUS mRNA 788516 796930 1 - . ID=LTnewLM_270024500.1;Parent=LTnewLM_270024500 LTnewLM_27 AUGUSTUS CDS 788516 796930 1 - 0 ID=LTnewLM_270024500.1:CDS:1;Parent=LTnewLM_270024500.1 ### LTnewLM_27 . polypeptide 788516 796930 . - . ID=LTnewLM_270024500.1:pep;Derives_from=LTnewLM_270024500.1;orthologous_to=LmjF.27.1820_mRNA;ortholog_cluster=OG0003361;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 797926 799044 1 - . ID=LTnewLM_270024600 LTnewLM_27 AUGUSTUS mRNA 797926 799044 1 - . ID=LTnewLM_270024600.1;Parent=LTnewLM_270024600 LTnewLM_27 AUGUSTUS CDS 797926 799044 1 - 0 ID=LTnewLM_270024600.1:CDS:1;Parent=LTnewLM_270024600.1 ### LTnewLM_27 . polypeptide 797926 799044 . - . ID=LTnewLM_270024600.1:pep;Derives_from=LTnewLM_270024600.1;orthologous_to=LmjF.27.1830_mRNA;ortholog_cluster=OG0003362;product=term%3D50S ribosome-binding GTPase/Ferrous iron transport protein B/Protein of unknown function (DUF933)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926|Pfam:PF02421|Pfam:PF06071;Ontology_term=GO:0005525,GO:0016021,GO:0015684,GO:0015093 LTnewLM_27 Pfam protein_match 797944 798186 . - . Parent=LTnewLM_270024600.1:pep;Name=PF06071;signature_desc=Protein of unknown function (DUF933) LTnewLM_27 Pfam protein_match 798685 799005 . - . Parent=LTnewLM_270024600.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_27 Pfam protein_match 798883 798999 . - . Parent=LTnewLM_270024600.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 ### LTnewLM_27 AUGUSTUS gene 799811 804985 1 - . ID=LTnewLM_270024700 LTnewLM_27 AUGUSTUS mRNA 799811 804985 1 - . ID=LTnewLM_270024700.1;Parent=LTnewLM_270024700 LTnewLM_27 AUGUSTUS CDS 799811 804985 1 - 0 ID=LTnewLM_270024700.1:CDS:1;Parent=LTnewLM_270024700.1 ### LTnewLM_27 . polypeptide 799811 804985 . - . ID=LTnewLM_270024700.1:pep;Derives_from=LTnewLM_270024700.1;orthologous_to=LmjF.27.1840_mRNA;ortholog_cluster=OG0003363;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_27 Pfam protein_match 801668 802060 . - . Parent=LTnewLM_270024700.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_27 AUGUSTUS gene 807145 809484 1 - . ID=LTnewLM_270024800 LTnewLM_27 AUGUSTUS mRNA 807145 809484 1 - . ID=LTnewLM_270024800.1;Parent=LTnewLM_270024800 LTnewLM_27 AUGUSTUS CDS 807145 809484 1 - 0 ID=LTnewLM_270024800.1:CDS:1;Parent=LTnewLM_270024800.1 ### LTnewLM_27 . polypeptide 807145 809484 . - . ID=LTnewLM_270024800.1:pep;Derives_from=LTnewLM_270024800.1;orthologous_to=LmjF.27.1850_mRNA;ortholog_cluster=OG0003364;product=term%3DParaflagellar rod protein/Variant SH3 domain/SH3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149|Pfam:PF07653|Pfam:PF00018|Pfam:PF14604;Ontology_term=GO:0005516,GO:0031514,GO:0005515 LTnewLM_27 Pfam protein_match 807178 807324 . - . Parent=LTnewLM_270024800.1:pep;Name=PF14604;signature_desc=Variant SH3 domain;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 807178 807330 . - . Parent=LTnewLM_270024800.1:pep;Name=PF07653;signature_desc=Variant SH3 domain LTnewLM_27 Pfam protein_match 807193 807327 . - . Parent=LTnewLM_270024800.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 807844 808719 . - . Parent=LTnewLM_270024800.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_27 AUGUSTUS gene 810703 813297 1 - . ID=LTnewLM_270024900 LTnewLM_27 AUGUSTUS mRNA 810703 813297 1 - . ID=LTnewLM_270024900.1;Parent=LTnewLM_270024900 LTnewLM_27 AUGUSTUS CDS 810703 813297 1 - 0 ID=LTnewLM_270024900.1:CDS:1;Parent=LTnewLM_270024900.1 ### LTnewLM_27 . polypeptide 810703 813297 . - . ID=LTnewLM_270024900.1:pep;Derives_from=LTnewLM_270024900.1;orthologous_to=LmjF.27.1860_mRNA;ortholog_cluster=OG0003365;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 815804 817762 1 - . ID=LTnewLM_270025000 LTnewLM_27 AUGUSTUS mRNA 815804 817762 1 - . ID=LTnewLM_270025000.1;Parent=LTnewLM_270025000 LTnewLM_27 AUGUSTUS CDS 815804 817762 1 - 0 ID=LTnewLM_270025000.1:CDS:1;Parent=LTnewLM_270025000.1 ### LTnewLM_27 . polypeptide 815804 817762 . - . ID=LTnewLM_270025000.1:pep;Derives_from=LTnewLM_270025000.1;orthologous_to=LTnewLM_250030800.1,LmjF.27.1870_mRNA;ortholog_cluster=OG0000399;product=term%3DCHAP domain/Glutathionylspermidine synthase preATP-grasp%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257|Pfam:PF03738 LTnewLM_27 Pfam protein_match 815879 816931 . - . Parent=LTnewLM_270025000.1:pep;Name=PF03738;signature_desc=Glutathionylspermidine synthase preATP-grasp LTnewLM_27 Pfam protein_match 817322 817606 . - . Parent=LTnewLM_270025000.1:pep;Name=PF05257;signature_desc=CHAP domain ### LTnewLM_27 AUGUSTUS gene 818447 820465 0.95 - . ID=LTnewLM_270025100 LTnewLM_27 AUGUSTUS mRNA 818447 820465 0.95 - . ID=LTnewLM_270025100.1;Parent=LTnewLM_270025100 LTnewLM_27 AUGUSTUS CDS 818447 820465 0.95 - 0 ID=LTnewLM_270025100.1:CDS:1;Parent=LTnewLM_270025100.1 ### LTnewLM_27 . polypeptide 818447 820465 . - . ID=LTnewLM_270025100.1:pep;Derives_from=LTnewLM_270025100.1;orthologous_to=LmjF.27.1880_mRNA;ortholog_cluster=OG0003366;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 821203 823779 1 - . ID=LTnewLM_270025200 LTnewLM_27 AUGUSTUS mRNA 821203 823779 1 - . ID=LTnewLM_270025200.1;Parent=LTnewLM_270025200 LTnewLM_27 AUGUSTUS CDS 821203 823779 1 - 0 ID=LTnewLM_270025200.1:CDS:1;Parent=LTnewLM_270025200.1 ### LTnewLM_27 . polypeptide 821203 823779 . - . ID=LTnewLM_270025200.1:pep;Derives_from=LTnewLM_270025200.1;orthologous_to=LmjF.27.1890_mRNA;ortholog_cluster=OG0003367;product=term%3DCalcineurin-like phosphoesterase/Mre11 DNA-binding presumed domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149|Pfam:PF04152;Ontology_term=GO:0004519,GO:0030145,GO:0005634,GO:0006302,GO:0016787 LTnewLM_27 Pfam protein_match 822373 822918 . - . Parent=LTnewLM_270025200.1:pep;Name=PF04152;signature_desc=Mre11 DNA-binding presumed domain;Ontology_term=GO:0004519,GO:0030145,GO:0006302,GO:0005634 LTnewLM_27 Pfam protein_match 823051 823764 . - . Parent=LTnewLM_270025200.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_27 AUGUSTUS gene 825101 828913 1.4 - . ID=LTnewLM_270025300 LTnewLM_27 AUGUSTUS mRNA 825101 828913 1 - . ID=LTnewLM_270025300.1;Parent=LTnewLM_270025300 LTnewLM_27 AUGUSTUS CDS 825101 828913 1 - 0 ID=LTnewLM_270025300.1:CDS:1;Parent=LTnewLM_270025300.1 LTnewLM_27 AUGUSTUS mRNA 827511 828913 0.4 - . ID=LTnewLM_270025300.2;Parent=LTnewLM_270025300 LTnewLM_27 AUGUSTUS CDS 827511 827521 0.62 - 2 ID=LTnewLM_270025300.2:CDS:1;Parent=LTnewLM_270025300.2 LTnewLM_27 AUGUSTUS CDS 827593 828913 0.68 - 0 ID=LTnewLM_270025300.2:CDS:2;Parent=LTnewLM_270025300.2 ### LTnewLM_27 . polypeptide 825101 828913 . - . ID=LTnewLM_270025300.1:pep;Derives_from=LTnewLM_270025300.1;orthologous_to=LTnewLM_270025300.2,LmjF.27.1895_mRNA;ortholog_cluster=OG0000412;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 827511 828913 . - . ID=LTnewLM_270025300.2:pep;Derives_from=LTnewLM_270025300.2;orthologous_to=LTnewLM_270025300.1,LmjF.27.1895_mRNA;ortholog_cluster=OG0000412;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 830698 831435 1 - . ID=LTnewLM_270025400 LTnewLM_27 AUGUSTUS mRNA 830698 831435 1 - . ID=LTnewLM_270025400.1;Parent=LTnewLM_270025400 LTnewLM_27 AUGUSTUS CDS 830698 831435 1 - 0 ID=LTnewLM_270025400.1:CDS:1;Parent=LTnewLM_270025400.1 ### LTnewLM_27 . polypeptide 830698 831435 . - . ID=LTnewLM_270025400.1:pep;Derives_from=LTnewLM_270025400.1;orthologous_to=LmjF.27.1900_mRNA;ortholog_cluster=OG0003368;product=term%3DEukaryotic protein of unknown function (DUF846)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05832;Ontology_term=GO:0016021 LTnewLM_27 Pfam protein_match 830854 831261 . - . Parent=LTnewLM_270025400.1:pep;Name=PF05832;signature_desc=Eukaryotic protein of unknown function (DUF846);Ontology_term=GO:0016021 ### LTnewLM_27 AUGUSTUS gene 832500 832922 1 - . ID=LTnewLM_270025500 LTnewLM_27 AUGUSTUS mRNA 832500 832922 1 - . ID=LTnewLM_270025500.1;Parent=LTnewLM_270025500 LTnewLM_27 AUGUSTUS CDS 832500 832922 1 - 0 ID=LTnewLM_270025500.1:CDS:1;Parent=LTnewLM_270025500.1 ### LTnewLM_27 . polypeptide 832500 832922 . - . ID=LTnewLM_270025500.1:pep;Derives_from=LTnewLM_270025500.1;orthologous_to=LmjF.27.1910_mRNA;ortholog_cluster=OG0003369;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 Liftoff gene 833884 837717 . - . ID=LTnewLM_270025600;coverage=0.997;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.1920_0 LTnewLM_27 Liftoff mRNA 833884 837717 . - . ID=LTnewLM_270025600.1;Parent=LTnewLM_270025600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 833884 837717 . - 0 ID=LTnewLM_270025600.1:CDS:1;Parent=LTnewLM_270025600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 833884 837717 . - . ID=LTnewLM_270025600.1:pep;Derives_from=LTnewLM_270025600.1;orthologous_to=LmjF.27.1920_mRNA;ortholog_cluster=OG0003370;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 842246 843310 1 - . ID=LTnewLM_270025700 LTnewLM_27 AUGUSTUS mRNA 842246 843310 1 - . ID=LTnewLM_270025700.1;Parent=LTnewLM_270025700 LTnewLM_27 AUGUSTUS CDS 842246 843310 1 - 0 ID=LTnewLM_270025700.1:CDS:1;Parent=LTnewLM_270025700.1 ### LTnewLM_27 . polypeptide 842246 843310 . - . ID=LTnewLM_270025700.1:pep;Derives_from=LTnewLM_270025700.1;orthologous_to=LmjF.27.1930_mRNA;ortholog_cluster=OG0003371;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 844255 845034 1 - . ID=LTnewLM_270025800 LTnewLM_27 AUGUSTUS mRNA 844255 845034 1 - . ID=LTnewLM_270025800.1;Parent=LTnewLM_270025800 LTnewLM_27 AUGUSTUS CDS 844255 845034 1 - 0 ID=LTnewLM_270025800.1:CDS:1;Parent=LTnewLM_270025800.1 ### LTnewLM_27 . polypeptide 844255 845034 . - . ID=LTnewLM_270025800.1:pep;Derives_from=LTnewLM_270025800.1;orthologous_to=LmjF.27.1945_mRNA;ortholog_cluster=OG0003372;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 846702 849569 1 - . ID=LTnewLM_270025900 LTnewLM_27 AUGUSTUS mRNA 846702 849569 1 - . ID=LTnewLM_270025900.1;Parent=LTnewLM_270025900 LTnewLM_27 AUGUSTUS CDS 846702 849569 1 - 0 ID=LTnewLM_270025900.1:CDS:1;Parent=LTnewLM_270025900.1 ### LTnewLM_27 . polypeptide 846702 849569 . - . ID=LTnewLM_270025900.1:pep;Derives_from=LTnewLM_270025900.1;orthologous_to=LmjF.27.1940_mRNA;ortholog_cluster=OG0003373;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 847293 847913 . - . Parent=LTnewLM_270025900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 847629 848126 . - . Parent=LTnewLM_270025900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_27 Pfam protein_match 847650 847901 . - . Parent=LTnewLM_270025900.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_27 AUGUSTUS gene 850725 855263 1 - . ID=LTnewLM_270026000 LTnewLM_27 AUGUSTUS mRNA 850725 855263 1 - . ID=LTnewLM_270026000.1;Parent=LTnewLM_270026000 LTnewLM_27 AUGUSTUS CDS 850725 855263 1 - 0 ID=LTnewLM_270026000.1:CDS:1;Parent=LTnewLM_270026000.1 ### LTnewLM_27 . polypeptide 850725 855263 . - . ID=LTnewLM_270026000.1:pep;Derives_from=LTnewLM_270026000.1;orthologous_to=LmjF.27.1950_mRNA;ortholog_cluster=OG0003374;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_27 Pfam protein_match 850749 850859 . - . Parent=LTnewLM_270026000.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_27 AUGUSTUS gene 856636 857928 1 - . ID=LTnewLM_270026100 LTnewLM_27 AUGUSTUS mRNA 856636 857928 1 - . ID=LTnewLM_270026100.1;Parent=LTnewLM_270026100 LTnewLM_27 AUGUSTUS CDS 856636 857928 1 - 0 ID=LTnewLM_270026100.1:CDS:1;Parent=LTnewLM_270026100.1 ### LTnewLM_27 . polypeptide 856636 857928 . - . ID=LTnewLM_270026100.1:pep;Derives_from=LTnewLM_270026100.1;orthologous_to=LmjF.27.1960_mRNA;ortholog_cluster=OG0003375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 859122 859457 1 - . ID=LTnewLM_270026200 LTnewLM_27 AUGUSTUS mRNA 859122 859457 1 - . ID=LTnewLM_270026200.1;Parent=LTnewLM_270026200 LTnewLM_27 AUGUSTUS CDS 859122 859457 1 - 0 ID=LTnewLM_270026200.1:CDS:1;Parent=LTnewLM_270026200.1 ### LTnewLM_27 . polypeptide 859122 859457 . - . ID=LTnewLM_270026200.1:pep;Derives_from=LTnewLM_270026200.1;orthologous_to=LmjF.27.1970_mRNA;ortholog_cluster=OG0003376;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_27 Pfam protein_match 859230 859430 . - . Parent=LTnewLM_270026200.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_27 AUGUSTUS gene 860705 863479 1 - . ID=LTnewLM_270026300 LTnewLM_27 AUGUSTUS mRNA 860705 863479 1 - . ID=LTnewLM_270026300.1;Parent=LTnewLM_270026300 LTnewLM_27 AUGUSTUS CDS 860705 863479 1 - 0 ID=LTnewLM_270026300.1:CDS:1;Parent=LTnewLM_270026300.1 ### LTnewLM_27 . polypeptide 860705 863479 . - . ID=LTnewLM_270026300.1:pep;Derives_from=LTnewLM_270026300.1;orthologous_to=LmjF.27.1980_mRNA;ortholog_cluster=OG0003377;product=term%3DFtsJ-like methyltransferase/Domain of unknown function (DUF3381)/Spb1 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728|Pfam:PF11861|Pfam:PF07780;Ontology_term=GO:0006364,GO:0005634,GO:0032259,GO:0008168 LTnewLM_27 Pfam protein_match 860744 861289 . - . Parent=LTnewLM_270026300.1:pep;Name=PF07780;signature_desc=Spb1 C-terminal domain;Ontology_term=GO:0008168,GO:0006364,GO:0005634 LTnewLM_27 Pfam protein_match 862256 862771 . - . Parent=LTnewLM_270026300.1:pep;Name=PF11861;signature_desc=Domain of unknown function (DUF3381) LTnewLM_27 Pfam protein_match 862880 863407 . - . Parent=LTnewLM_270026300.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_27 . pseudogene 864584 867808 5.26e+03 - . ID=LTnewLM_270026400:pseudogene;has_internal_stop=false;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.27.1990:mRNA 1 1088;original_prot_length=1088 LTnewLM_27 . pseudogenic_transcript 864584 867808 . - . ID=LTnewLM_270026400.1;Parent=LTnewLM_270026400:pseudogene LTnewLM_27 . pseudogenic_exon 864584 867808 . - . ID=LTnewLM_270026400.1:pseudogenic_exon:1;Parent=LTnewLM_270026400.1 ### LTnewLM_27 . polypeptide 864584 867808 . - . ID=LTnewLM_270026400.1:pep;Derives_from=LTnewLM_270026400.1;orthologous_to=LmjF.27.1990_mRNA;ortholog_cluster=OG0007566;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_27 Pfam protein_match 865178 865435 . - . Parent=LTnewLM_270026400.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 LTnewLM_27 Pfam protein_match 865889 866080 . - . Parent=LTnewLM_270026400.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_27 AUGUSTUS gene 870857 871450 1 - . ID=LTnewLM_270026500 LTnewLM_27 AUGUSTUS mRNA 870857 871450 1 - . ID=LTnewLM_270026500.1;Parent=LTnewLM_270026500 LTnewLM_27 AUGUSTUS CDS 870857 871450 1 - 0 ID=LTnewLM_270026500.1:CDS:1;Parent=LTnewLM_270026500.1 ### LTnewLM_27 . polypeptide 870857 871450 . - . ID=LTnewLM_270026500.1:pep;Derives_from=LTnewLM_270026500.1;orthologous_to=LmjF.27.2000_mRNA;ortholog_cluster=OG0003378;product=term%3DGMP-PDE%2C delta subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05351 LTnewLM_27 Pfam protein_match 870878 871372 . - . Parent=LTnewLM_270026500.1:pep;Name=PF05351;signature_desc=GMP-PDE%2C delta subunit ### LTnewLM_27 AUGUSTUS gene 872340 874028 1 - . ID=LTnewLM_270026600 LTnewLM_27 AUGUSTUS mRNA 872340 874028 1 - . ID=LTnewLM_270026600.1;Parent=LTnewLM_270026600 LTnewLM_27 AUGUSTUS CDS 872340 874028 1 - 0 ID=LTnewLM_270026600.1:CDS:1;Parent=LTnewLM_270026600.1 ### LTnewLM_27 . polypeptide 872340 874028 . - . ID=LTnewLM_270026600.1:pep;Derives_from=LTnewLM_270026600.1;orthologous_to=LmjF.27.2010_mRNA;ortholog_cluster=OG0003379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 877092 878573 1 - . ID=LTnewLM_270026700 LTnewLM_27 AUGUSTUS mRNA 877092 878573 1 - . ID=LTnewLM_270026700.1;Parent=LTnewLM_270026700 LTnewLM_27 AUGUSTUS CDS 877092 878573 1 - 0 ID=LTnewLM_270026700.1:CDS:1;Parent=LTnewLM_270026700.1 ### LTnewLM_27 . polypeptide 877092 878573 . - . ID=LTnewLM_270026700.1:pep;Derives_from=LTnewLM_270026700.1;orthologous_to=LmjF.27.2020_mRNA;ortholog_cluster=OG0003380;product=term%3DFAD binding domain/FAD linked oxidases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565|Pfam:PF02913;Ontology_term=GO:0003824,GO:0016491,GO:0055114,GO:0008762,GO:0050660 LTnewLM_27 Pfam protein_match 877143 877856 . - . Parent=LTnewLM_270026700.1:pep;Name=PF02913;signature_desc=FAD linked oxidases%2C C-terminal domain;Ontology_term=GO:0003824,GO:0050660 LTnewLM_27 Pfam protein_match 877986 878390 . - . Parent=LTnewLM_270026700.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_27 AUGUSTUS gene 880011 881216 1 - . ID=LTnewLM_270026800 LTnewLM_27 AUGUSTUS mRNA 880011 881216 1 - . ID=LTnewLM_270026800.1;Parent=LTnewLM_270026800 LTnewLM_27 AUGUSTUS CDS 880011 881216 1 - 0 ID=LTnewLM_270026800.1:CDS:1;Parent=LTnewLM_270026800.1 ### LTnewLM_27 . polypeptide 880011 881216 . - . ID=LTnewLM_270026800.1:pep;Derives_from=LTnewLM_270026800.1;orthologous_to=LTnewLM_270026900.1,LmjF.27.2030_mRNA;ortholog_cluster=OG0000413;product=term%3DAmino-transferase class IV%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01063;Ontology_term=GO:0003824,GO:0008152 LTnewLM_27 Pfam protein_match 880149 880946 . - . Parent=LTnewLM_270026800.1:pep;Name=PF01063;signature_desc=Amino-transferase class IV;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_27 AUGUSTUS gene 883858 885069 1 - . ID=LTnewLM_270026900 LTnewLM_27 AUGUSTUS mRNA 883858 885069 1 - . ID=LTnewLM_270026900.1;Parent=LTnewLM_270026900 LTnewLM_27 AUGUSTUS CDS 883858 885069 1 - 0 ID=LTnewLM_270026900.1:CDS:1;Parent=LTnewLM_270026900.1 ### LTnewLM_27 . polypeptide 883858 885069 . - . ID=LTnewLM_270026900.1:pep;Derives_from=LTnewLM_270026900.1;orthologous_to=LTnewLM_270026800.1,LmjF.27.2030_mRNA;ortholog_cluster=OG0000413;product=term%3DAmino-transferase class IV%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01063;Ontology_term=GO:0003824,GO:0008152 LTnewLM_27 Pfam protein_match 884002 884799 . - . Parent=LTnewLM_270026900.1:pep;Name=PF01063;signature_desc=Amino-transferase class IV;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_27 AUGUSTUS gene 886238 886921 1 - . ID=LTnewLM_270027000 LTnewLM_27 AUGUSTUS mRNA 886238 886921 1 - . ID=LTnewLM_270027000.1;Parent=LTnewLM_270027000 LTnewLM_27 AUGUSTUS CDS 886238 886921 1 - 0 ID=LTnewLM_270027000.1:CDS:1;Parent=LTnewLM_270027000.1 ### LTnewLM_27 . polypeptide 886238 886921 . - . ID=LTnewLM_270027000.1:pep;Derives_from=LTnewLM_270027000.1;orthologous_to=LmjF.27.2040_mRNA;ortholog_cluster=OG0003381;product=term%3DTransmembrane adaptor Erv26%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04148 LTnewLM_27 Pfam protein_match 886382 886828 . - . Parent=LTnewLM_270027000.1:pep;Name=PF04148;signature_desc=Transmembrane adaptor Erv26 ### LTnewLM_27 Liftoff gene 890340 891530 . - . ID=LTnewLM_270027100;coverage=1.0;sequence_ID=0.971;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.2050_0 LTnewLM_27 Liftoff mRNA 890340 891530 . - . ID=LTnewLM_270027100.1;Parent=LTnewLM_270027100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 890340 891530 . - 0 ID=LTnewLM_270027100.1:CDS:1;Parent=LTnewLM_270027100.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 890340 891530 . - . ID=LTnewLM_270027100.1:pep;Derives_from=LTnewLM_270027100.1;orthologous_to=LTnewLM_220018700.1,LmjF.22.1290_mRNA,LmjF.27.2050_mRNA;ortholog_cluster=OG0000167;product=term%3DRibonucleotide reductase%2C small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00268;Ontology_term=GO:0009186,GO:0055114 LTnewLM_27 Pfam protein_match 890478 891278 . - . Parent=LTnewLM_270027100.1:pep;Name=PF00268;signature_desc=Ribonucleotide reductase%2C small chain;Ontology_term=GO:0009186,GO:0055114 ### LTnewLM_27 AUGUSTUS gene 892457 893605 1 - . ID=LTnewLM_270027200 LTnewLM_27 AUGUSTUS mRNA 892457 893605 1 - . ID=LTnewLM_270027200.1;Parent=LTnewLM_270027200 LTnewLM_27 AUGUSTUS CDS 892457 893605 1 - 0 ID=LTnewLM_270027200.1:CDS:1;Parent=LTnewLM_270027200.1 ### LTnewLM_27 . polypeptide 892457 893605 . - . ID=LTnewLM_270027200.1:pep;Derives_from=LTnewLM_270027200.1;orthologous_to=LmjF.27.2060_mRNA;ortholog_cluster=OG0003382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 894842 897400 1 - . ID=LTnewLM_270027300 LTnewLM_27 AUGUSTUS mRNA 894842 897400 1 - . ID=LTnewLM_270027300.1;Parent=LTnewLM_270027300 LTnewLM_27 AUGUSTUS CDS 894842 897400 1 - 0 ID=LTnewLM_270027300.1:CDS:1;Parent=LTnewLM_270027300.1 ### LTnewLM_27 . polypeptide 894842 897400 . - . ID=LTnewLM_270027300.1:pep;Derives_from=LTnewLM_270027300.1;orthologous_to=LmjF.27.2070_mRNA;ortholog_cluster=OG0003383;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 899618 899866 1 - . ID=LTnewLM_270027400 LTnewLM_27 AUGUSTUS mRNA 899618 899866 1 - . ID=LTnewLM_270027400.1;Parent=LTnewLM_270027400 LTnewLM_27 AUGUSTUS CDS 899618 899866 1 - 0 ID=LTnewLM_270027400.1:CDS:1;Parent=LTnewLM_270027400.1 ### LTnewLM_27 . polypeptide 899618 899866 . - . ID=LTnewLM_270027400.1:pep;Derives_from=LTnewLM_270027400.1;orthologous_to=LmjF.27.2080_mRNA;ortholog_cluster=OG0003384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 901671 902117 1 - . ID=LTnewLM_270027500 LTnewLM_27 AUGUSTUS mRNA 901671 902117 1 - . ID=LTnewLM_270027500.1;Parent=LTnewLM_270027500 LTnewLM_27 AUGUSTUS CDS 901671 902117 1 - 0 ID=LTnewLM_270027500.1:CDS:1;Parent=LTnewLM_270027500.1 ### LTnewLM_27 . polypeptide 901671 902117 . - . ID=LTnewLM_270027500.1:pep;Derives_from=LTnewLM_270027500.1;orthologous_to=LmjF.27.2090_mRNA;ortholog_cluster=OG0003385;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 903583 904902 1 - . ID=LTnewLM_270027600 LTnewLM_27 AUGUSTUS mRNA 903583 904902 1 - . ID=LTnewLM_270027600.1;Parent=LTnewLM_270027600 LTnewLM_27 AUGUSTUS CDS 903583 904902 1 - 0 ID=LTnewLM_270027600.1:CDS:1;Parent=LTnewLM_270027600.1 ### LTnewLM_27 . polypeptide 903583 904902 . - . ID=LTnewLM_270027600.1:pep;Derives_from=LTnewLM_270027600.1;orthologous_to=LmjF.27.2100_mRNA;ortholog_cluster=OG0003386;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_27 Pfam protein_match 903985 904173 . - . Parent=LTnewLM_270027600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_27 Pfam protein_match 904300 904485 . - . Parent=LTnewLM_270027600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_27 Pfam protein_match 904708 904887 . - . Parent=LTnewLM_270027600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_27 AUGUSTUS gene 907530 910808 1 - . ID=LTnewLM_270027700 LTnewLM_27 AUGUSTUS mRNA 907530 910808 1 - . ID=LTnewLM_270027700.1;Parent=LTnewLM_270027700 LTnewLM_27 AUGUSTUS CDS 907530 910808 1 - 0 ID=LTnewLM_270027700.1:CDS:1;Parent=LTnewLM_270027700.1 ### LTnewLM_27 . polypeptide 907530 910808 . - . ID=LTnewLM_270027700.1:pep;Derives_from=LTnewLM_270027700.1;orthologous_to=LmjF.27.2110_mRNA;ortholog_cluster=OG0003387;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_27 Pfam protein_match 908172 908936 . - . Parent=LTnewLM_270027700.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_27 AUGUSTUS gene 913966 914979 1 - . ID=LTnewLM_270027800 LTnewLM_27 AUGUSTUS mRNA 913966 914979 1 - . ID=LTnewLM_270027800.1;Parent=LTnewLM_270027800 LTnewLM_27 AUGUSTUS CDS 913966 914979 1 - 0 ID=LTnewLM_270027800.1:CDS:1;Parent=LTnewLM_270027800.1 ### LTnewLM_27 . polypeptide 913966 914979 . - . ID=LTnewLM_270027800.1:pep;Derives_from=LTnewLM_270027800.1;orthologous_to=LmjF.27.2120_mRNA;ortholog_cluster=OG0003388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 916895 922459 1.48 - . ID=LTnewLM_270027900 LTnewLM_27 AUGUSTUS mRNA 916895 922459 1 - . ID=LTnewLM_270027900.1;Parent=LTnewLM_270027900 LTnewLM_27 AUGUSTUS CDS 916895 922459 1 - 0 ID=LTnewLM_270027900.1:CDS:1;Parent=LTnewLM_270027900.1 LTnewLM_27 AUGUSTUS mRNA 921151 922459 0.48 - . ID=LTnewLM_270027900.2;Parent=LTnewLM_270027900 LTnewLM_27 AUGUSTUS CDS 921151 921217 0.5 - 1 ID=LTnewLM_270027900.2:CDS:1;Parent=LTnewLM_270027900.2 LTnewLM_27 AUGUSTUS CDS 921324 922459 0.69 - 0 ID=LTnewLM_270027900.2:CDS:2;Parent=LTnewLM_270027900.2 ### LTnewLM_27 . polypeptide 916895 922459 . - . ID=LTnewLM_270027900.1:pep;Derives_from=LTnewLM_270027900.1;orthologous_to=LTnewLM_270027900.2,LmjF.27.2130_mRNA;ortholog_cluster=OG0000414;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 921151 922459 . - . ID=LTnewLM_270027900.2:pep;Derives_from=LTnewLM_270027900.2;orthologous_to=LTnewLM_270027900.1,LmjF.27.2130_mRNA;ortholog_cluster=OG0000414;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 923807 924415 0.83 - . ID=LTnewLM_270028000 LTnewLM_27 AUGUSTUS mRNA 923807 924415 0.83 - . ID=LTnewLM_270028000.1;Parent=LTnewLM_270028000 LTnewLM_27 AUGUSTUS CDS 923807 923823 0.86 - 2 ID=LTnewLM_270028000.1:CDS:1;Parent=LTnewLM_270028000.1 LTnewLM_27 AUGUSTUS CDS 923941 924415 0.83 - 0 ID=LTnewLM_270028000.1:CDS:2;Parent=LTnewLM_270028000.1 ### LTnewLM_27 . polypeptide 923807 924415 . - . ID=LTnewLM_270028000.1:pep;Derives_from=LTnewLM_270028000.1;orthologous_to=LTnewLM_270012300.1;ortholog_cluster=OG0003274;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 927375 930407 1 - . ID=LTnewLM_270028100 LTnewLM_27 AUGUSTUS mRNA 927375 930407 1 - . ID=LTnewLM_270028100.1;Parent=LTnewLM_270028100 LTnewLM_27 AUGUSTUS CDS 927375 930407 1 - 0 ID=LTnewLM_270028100.1:CDS:1;Parent=LTnewLM_270028100.1 ### LTnewLM_27 . polypeptide 927375 930407 . - . ID=LTnewLM_270028100.1:pep;Derives_from=LTnewLM_270028100.1;orthologous_to=LmjF.27.2140_mRNA;ortholog_cluster=OG0003389;product=term%3DPhosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00454;Ontology_term=GO:0016773 LTnewLM_27 Pfam protein_match 928245 929174 . - . Parent=LTnewLM_270028100.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_27 Liftoff gene 933854 934015 . - . ID=LTnewLM_270028200;coverage=1.0;sequence_ID=0.969;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.2150_0 LTnewLM_27 Liftoff mRNA 933854 934015 . - . ID=LTnewLM_270028200.1;Parent=LTnewLM_270028200;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 933854 934015 . - 0 ID=LTnewLM_270028200.1:CDS:1;Parent=LTnewLM_270028200.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 933854 934015 . - . ID=LTnewLM_270028200.1:pep;Derives_from=LTnewLM_270028200.1;orthologous_to=LmjF.27.2150_mRNA;ortholog_cluster=OG0003390;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 934837 935967 1 - . ID=LTnewLM_270028300 LTnewLM_27 AUGUSTUS mRNA 934837 935967 1 - . ID=LTnewLM_270028300.1;Parent=LTnewLM_270028300 LTnewLM_27 AUGUSTUS CDS 934837 935967 1 - 0 ID=LTnewLM_270028300.1:CDS:1;Parent=LTnewLM_270028300.1 ### LTnewLM_27 . polypeptide 934837 935967 . - . ID=LTnewLM_270028300.1:pep;Derives_from=LTnewLM_270028300.1;orthologous_to=LmjF.27.2160_mRNA;ortholog_cluster=OG0003391;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 937543 942318 1 - . ID=LTnewLM_270028400 LTnewLM_27 AUGUSTUS mRNA 937543 942318 1 - . ID=LTnewLM_270028400.1;Parent=LTnewLM_270028400 LTnewLM_27 AUGUSTUS CDS 937543 942318 1 - 0 ID=LTnewLM_270028400.1:CDS:1;Parent=LTnewLM_270028400.1 ### LTnewLM_27 . polypeptide 937543 942318 . - . ID=LTnewLM_270028400.1:pep;Derives_from=LTnewLM_270028400.1;orthologous_to=LmjF.27.2170_mRNA;ortholog_cluster=OG0003392;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 940420 940521 . - . Parent=LTnewLM_270028400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 943437 944615 1 - . ID=LTnewLM_270028500 LTnewLM_27 AUGUSTUS mRNA 943437 944615 1 - . ID=LTnewLM_270028500.1;Parent=LTnewLM_270028500 LTnewLM_27 AUGUSTUS CDS 943437 944615 1 - 0 ID=LTnewLM_270028500.1:CDS:1;Parent=LTnewLM_270028500.1 ### LTnewLM_27 . polypeptide 943437 944615 . - . ID=LTnewLM_270028500.1:pep;Derives_from=LTnewLM_270028500.1;orthologous_to=LmjF.27.2180_mRNA;ortholog_cluster=OG0003393;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 943608 944066 . - . Parent=LTnewLM_270028500.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_27 AUGUSTUS gene 945824 946312 1 - . ID=LTnewLM_270028600 LTnewLM_27 AUGUSTUS mRNA 945824 946312 1 - . ID=LTnewLM_270028600.1;Parent=LTnewLM_270028600 LTnewLM_27 AUGUSTUS CDS 945824 946312 1 - 0 ID=LTnewLM_270028600.1:CDS:1;Parent=LTnewLM_270028600.1 ### LTnewLM_27 . polypeptide 945824 946312 . - . ID=LTnewLM_270028600.1:pep;Derives_from=LTnewLM_270028600.1;orthologous_to=LmjF.27.2190_mRNA;ortholog_cluster=OG0003394;product=term%3DVitamin K epoxide reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07884 LTnewLM_27 Pfam protein_match 945908 946291 . - . Parent=LTnewLM_270028600.1:pep;Name=PF07884;signature_desc=Vitamin K epoxide reductase family ### LTnewLM_27 AUGUSTUS gene 947310 948029 1 - . ID=LTnewLM_270028700 LTnewLM_27 AUGUSTUS mRNA 947310 948029 1 - . ID=LTnewLM_270028700.1;Parent=LTnewLM_270028700 LTnewLM_27 AUGUSTUS CDS 947310 948029 1 - 0 ID=LTnewLM_270028700.1:CDS:1;Parent=LTnewLM_270028700.1 ### LTnewLM_27 . polypeptide 947310 948029 . - . ID=LTnewLM_270028700.1:pep;Derives_from=LTnewLM_270028700.1;orthologous_to=LmjF.27.2200_mRNA;ortholog_cluster=OG0003395;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_27 Pfam protein_match 947406 947663 . - . Parent=LTnewLM_270028700.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_27 AUGUSTUS gene 950941 951999 1 - . ID=LTnewLM_270028800 LTnewLM_27 AUGUSTUS mRNA 950941 951999 1 - . ID=LTnewLM_270028800.1;Parent=LTnewLM_270028800 LTnewLM_27 AUGUSTUS CDS 950941 951999 1 - 0 ID=LTnewLM_270028800.1:CDS:1;Parent=LTnewLM_270028800.1 ### LTnewLM_27 . polypeptide 950941 951999 . - . ID=LTnewLM_270028800.1:pep;Derives_from=LTnewLM_270028800.1;orthologous_to=LmjF.27.2210_mRNA;ortholog_cluster=OG0003396;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_27 Pfam protein_match 951040 951420 . - . Parent=LTnewLM_270028800.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_27 AUGUSTUS gene 953211 954248 1 - . ID=LTnewLM_270028900 LTnewLM_27 AUGUSTUS mRNA 953211 954248 1 - . ID=LTnewLM_270028900.1;Parent=LTnewLM_270028900 LTnewLM_27 AUGUSTUS CDS 953211 954248 1 - 0 ID=LTnewLM_270028900.1:CDS:1;Parent=LTnewLM_270028900.1 ### LTnewLM_27 . polypeptide 953211 954248 . - . ID=LTnewLM_270028900.1:pep;Derives_from=LTnewLM_270028900.1;orthologous_to=LmjF.27.2220_mRNA;ortholog_cluster=OG0003397;product=term%3DRibosomal protein L11%2C N-terminal domain/Ribosomal protein L11%2C RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03946|Pfam:PF00298;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_27 Pfam protein_match 953679 953897 . - . Parent=LTnewLM_270028900.1:pep;Name=PF00298;signature_desc=Ribosomal protein L11%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_27 Pfam protein_match 953916 954086 . - . Parent=LTnewLM_270028900.1:pep;Name=PF03946;signature_desc=Ribosomal protein L11%2C N-terminal domain ### LTnewLM_27 Liftoff gene 955375 962187 . - . ID=LTnewLM_270029000;coverage=0.998;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.2230_0 LTnewLM_27 Liftoff mRNA 955375 962187 . - . ID=LTnewLM_270029000.1;Parent=LTnewLM_270029000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 955375 962187 . - 0 ID=LTnewLM_270029000.1:CDS:1;Parent=LTnewLM_270029000.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 955375 962187 . - . ID=LTnewLM_270029000.1:pep;Derives_from=LTnewLM_270029000.1;orthologous_to=LmjF.27.2230_mRNA;ortholog_cluster=OG0003398;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 963423 963695 1 - . ID=LTnewLM_270029100 LTnewLM_27 AUGUSTUS mRNA 963423 963695 1 - . ID=LTnewLM_270029100.1;Parent=LTnewLM_270029100 LTnewLM_27 AUGUSTUS CDS 963423 963695 1 - 0 ID=LTnewLM_270029100.1:CDS:1;Parent=LTnewLM_270029100.1 ### LTnewLM_27 . polypeptide 963423 963695 . - . ID=LTnewLM_270029100.1:pep;Derives_from=LTnewLM_270029100.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 964723 967017 1 - . ID=LTnewLM_270029200 LTnewLM_27 AUGUSTUS mRNA 964723 967017 1 - . ID=LTnewLM_270029200.1;Parent=LTnewLM_270029200 LTnewLM_27 AUGUSTUS CDS 964723 967017 1 - 0 ID=LTnewLM_270029200.1:CDS:1;Parent=LTnewLM_270029200.1 ### LTnewLM_27 . polypeptide 964723 967017 . - . ID=LTnewLM_270029200.1:pep;Derives_from=LTnewLM_270029200.1;orthologous_to=LmjF.27.2240_mRNA;ortholog_cluster=OG0003399;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . polypeptide 967995 969071 . - . ID=LTnewLM_270029300.1:pep;Derives_from=LTnewLM_270029300.1;orthologous_to=LTnewLM_270029300.2,LmjF.27.2250.1_mRNA,LmjF.27.2250.2_mRNA;ortholog_cluster=OG0000195;product=term%3DEMG1/NEP1 methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03587;Ontology_term=GO:0008168 LTnewLM_27 Pfam protein_match 968160 968732 . - . Parent=LTnewLM_270029300.1:pep;Name=PF03587;signature_desc=EMG1/NEP1 methyltransferase;Ontology_term=GO:0008168 ### LTnewLM_27 . polypeptide 967995 969194 . - . ID=LTnewLM_270029300.2:pep;Derives_from=LTnewLM_270029300.2;orthologous_to=LTnewLM_270029300.1,LmjF.27.2250.1_mRNA,LmjF.27.2250.2_mRNA;ortholog_cluster=OG0000195;product=term%3DEMG1/NEP1 methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03587;Ontology_term=GO:0008168 LTnewLM_27 Pfam protein_match 968160 968732 . - . Parent=LTnewLM_270029300.2:pep;Name=PF03587;signature_desc=EMG1/NEP1 methyltransferase;Ontology_term=GO:0008168 ### LTnewLM_27 Liftoff gene 967995 969199 . - . ID=LTnewLM_270029300;coverage=0.995;sequence_ID=0.957;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.27.2250_0 LTnewLM_27 Liftoff mRNA 967995 969196 . - . ID=LTnewLM_270029300.1;Parent=LTnewLM_270029300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 967995 969071 . - 0 ID=LTnewLM_270029300.1:CDS:1;Parent=LTnewLM_270029300.1;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 969072 969196 . - . ID=LTnewLM_270029300:five_prime_UTR;Parent=LTnewLM_270029300.1;extra_copy_number=0 LTnewLM_27 Liftoff mRNA 967995 969199 . - . ID=LTnewLM_270029300.2;Parent=LTnewLM_270029300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 967995 969194 . - 0 ID=LTnewLM_270029300.2:CDS:1;Parent=LTnewLM_270029300.2;extra_copy_number=0 LTnewLM_27 Liftoff five_prime_UTR 969195 969199 . - . ID=LTnewLM_270029300:five_prime_UTR.1;Parent=LTnewLM_270029300.2;extra_copy_number=0 ### LTnewLM_27 AUGUSTUS gene 969817 973245 1 - . ID=LTnewLM_270029400 LTnewLM_27 AUGUSTUS mRNA 969817 973245 1 - . ID=LTnewLM_270029400.1;Parent=LTnewLM_270029400 LTnewLM_27 AUGUSTUS CDS 969817 973245 1 - 0 ID=LTnewLM_270029400.1:CDS:1;Parent=LTnewLM_270029400.1 ### LTnewLM_27 . polypeptide 969817 973245 . - . ID=LTnewLM_270029400.1:pep;Derives_from=LTnewLM_270029400.1;orthologous_to=LmjF.27.2260_mRNA;ortholog_cluster=OG0003400;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 975165 977346 . - . ID=LTnewLM_270029500:pseudogene;coverage=0.989;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.2270_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 975165 977346 . - . ID=LTnewLM_270029500.1;Parent=LTnewLM_270029500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 975165 977346 . - . ID=LTnewLM_270029500.1:pseudogenic_exon:1;Parent=LTnewLM_270029500.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 975165 977346 . - . ID=LTnewLM_270029500.1:pep;Derives_from=LTnewLM_270029500.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 978889 980604 1 - . ID=LTnewLM_270029600 LTnewLM_27 AUGUSTUS mRNA 978889 980604 1 - . ID=LTnewLM_270029600.1;Parent=LTnewLM_270029600 LTnewLM_27 AUGUSTUS CDS 978889 980604 1 - 0 ID=LTnewLM_270029600.1:CDS:1;Parent=LTnewLM_270029600.1 ### LTnewLM_27 . polypeptide 978889 980604 . - . ID=LTnewLM_270029600.1:pep;Derives_from=LTnewLM_270029600.1;orthologous_to=LmjF.27.2280_mRNA;ortholog_cluster=OG0003401;product=term%3DMeiotic cell cortex C-terminal pleckstrin homology/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12814|Pfam:PF00169;Ontology_term=GO:0005543,GO:0005515,GO:0032065,GO:0005938 LTnewLM_27 Pfam protein_match 978943 979242 . - . Parent=LTnewLM_270029600.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_27 Pfam protein_match 978946 979263 . - . Parent=LTnewLM_270029600.1:pep;Name=PF12814;signature_desc=Meiotic cell cortex C-terminal pleckstrin homology;Ontology_term=GO:0005515,GO:0005543,GO:0032065,GO:0005938 ### LTnewLM_27 Liftoff gene 982755 985052 . - . ID=LTnewLM_270029700;coverage=1.0;sequence_ID=0.966;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.2290_0 LTnewLM_27 Liftoff mRNA 982755 985052 . - . ID=LTnewLM_270029700.1;Parent=LTnewLM_270029700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 982755 985052 . - 0 ID=LTnewLM_270029700.1:CDS:1;Parent=LTnewLM_270029700.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 982755 985052 . - . ID=LTnewLM_270029700.1:pep;Derives_from=LTnewLM_270029700.1;orthologous_to=LmjF.27.2290_mRNA;ortholog_cluster=OG0003402;product=term%3DAcyl-CoA oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01756;Ontology_term=GO:0006635,GO:0003997,GO:0055114,GO:0005777 LTnewLM_27 Pfam protein_match 983007 983354 . - . Parent=LTnewLM_270029700.1:pep;Name=PF01756;signature_desc=Acyl-CoA oxidase;Ontology_term=GO:0003997,GO:0006635,GO:0055114,GO:0005777 ### LTnewLM_27 AUGUSTUS gene 986202 988295 1 - . ID=LTnewLM_270029800 LTnewLM_27 AUGUSTUS mRNA 986202 988295 1 - . ID=LTnewLM_270029800.1;Parent=LTnewLM_270029800 LTnewLM_27 AUGUSTUS CDS 986202 988295 1 - 0 ID=LTnewLM_270029800.1:CDS:1;Parent=LTnewLM_270029800.1 ### LTnewLM_27 . polypeptide 986202 988295 . - . ID=LTnewLM_270029800.1:pep;Derives_from=LTnewLM_270029800.1;orthologous_to=LmjF.27.2300_mRNA;ortholog_cluster=OG0003403;product=term%3DEarly transcription elongation factor of RNA pol II%2C NGN section%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03439 LTnewLM_27 Pfam protein_match 987522 987788 . - . Parent=LTnewLM_270029800.1:pep;Name=PF03439;signature_desc=Early transcription elongation factor of RNA pol II%2C NGN section ### LTnewLM_27 AUGUSTUS gene 989125 989673 1 - . ID=LTnewLM_270029900 LTnewLM_27 AUGUSTUS mRNA 989125 989673 1 - . ID=LTnewLM_270029900.1;Parent=LTnewLM_270029900 LTnewLM_27 AUGUSTUS CDS 989125 989673 1 - 0 ID=LTnewLM_270029900.1:CDS:1;Parent=LTnewLM_270029900.1 ### LTnewLM_27 . polypeptide 989125 989673 . - . ID=LTnewLM_270029900.1:pep;Derives_from=LTnewLM_270029900.1;orthologous_to=LmjF.27.2305_mRNA;ortholog_cluster=OG0003404;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_27 Pfam protein_match 989191 989253 . - . Parent=LTnewLM_270029900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_27 Pfam protein_match 989260 989322 . - . Parent=LTnewLM_270029900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_27 Pfam protein_match 989326 989391 . - . Parent=LTnewLM_270029900.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_27 AUGUSTUS gene 990256 990999 1 - . ID=LTnewLM_270030000 LTnewLM_27 AUGUSTUS mRNA 990256 990999 1 - . ID=LTnewLM_270030000.1;Parent=LTnewLM_270030000 LTnewLM_27 AUGUSTUS CDS 990256 990999 1 - 0 ID=LTnewLM_270030000.1:CDS:1;Parent=LTnewLM_270030000.1 ### LTnewLM_27 . polypeptide 990256 990999 . - . ID=LTnewLM_270030000.1:pep;Derives_from=LTnewLM_270030000.1;orthologous_to=LmjF.27.2310_mRNA;ortholog_cluster=OG0003405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 991873 992817 1 - . ID=LTnewLM_270030100 LTnewLM_27 AUGUSTUS mRNA 991873 992817 1 - . ID=LTnewLM_270030100.1;Parent=LTnewLM_270030100 LTnewLM_27 AUGUSTUS CDS 991873 992817 1 - 0 ID=LTnewLM_270030100.1:CDS:1;Parent=LTnewLM_270030100.1 ### LTnewLM_27 . polypeptide 991873 992817 . - . ID=LTnewLM_270030100.1:pep;Derives_from=LTnewLM_270030100.1;orthologous_to=LmjF.27.2320_mRNA;ortholog_cluster=OG0003406;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_27 Pfam protein_match 991972 992712 . - . Parent=LTnewLM_270030100.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_27 AUGUSTUS gene 993391 994569 1 - . ID=LTnewLM_270030200 LTnewLM_27 AUGUSTUS mRNA 993391 994569 1 - . ID=LTnewLM_270030200.1;Parent=LTnewLM_270030200 LTnewLM_27 AUGUSTUS CDS 993391 994569 1 - 0 ID=LTnewLM_270030200.1:CDS:1;Parent=LTnewLM_270030200.1 ### LTnewLM_27 . polypeptide 993391 994569 . - . ID=LTnewLM_270030200.1:pep;Derives_from=LTnewLM_270030200.1;orthologous_to=LmjF.27.2330_mRNA;ortholog_cluster=OG0003407;product=term%3D50S ribosome-binding GTPase/Protein of unknown function (DUF933)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926|Pfam:PF06071;Ontology_term=GO:0005525 LTnewLM_27 Pfam protein_match 993418 993666 . - . Parent=LTnewLM_270030200.1:pep;Name=PF06071;signature_desc=Protein of unknown function (DUF933) LTnewLM_27 Pfam protein_match 994162 994500 . - . Parent=LTnewLM_270030200.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_27 AUGUSTUS gene 994949 995431 1 - . ID=LTnewLM_270030300 LTnewLM_27 AUGUSTUS mRNA 994949 995431 1 - . ID=LTnewLM_270030300.1;Parent=LTnewLM_270030300 LTnewLM_27 AUGUSTUS CDS 994949 995431 1 - 0 ID=LTnewLM_270030300.1:CDS:1;Parent=LTnewLM_270030300.1 ### LTnewLM_27 . polypeptide 994949 995431 . - . ID=LTnewLM_270030300.1:pep;Derives_from=LTnewLM_270030300.1;orthologous_to=LmjF.27.2335_mRNA;ortholog_cluster=OG0003408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 Liftoff gene 995744 996994 . - . ID=LTnewLM_270030400;coverage=1.0;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.2337_0 LTnewLM_27 Liftoff mRNA 995744 996994 . - . ID=LTnewLM_270030400.1;Parent=LTnewLM_270030400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 995744 996994 . - 0 ID=LTnewLM_270030400.1:CDS:1;Parent=LTnewLM_270030400.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 995744 996994 . - . ID=LTnewLM_270030400.1:pep;Derives_from=LTnewLM_270030400.1;orthologous_to=LmjF.27.2337_mRNA;ortholog_cluster=OG0003409;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 GenomeTools gene 1011502 1013707 982 + . ID=LTnewLM_270030500 LTnewLM_27 INFERNAL rRNA 1011502 1013707 982 + . ID=LTnewLM_270030500:rRNA;Parent=LTnewLM_270030500;gc=0.50;evalue=0;score=982.2;model_name=SSU_rRNA_eukarya;model_acc=RF01960;model_range=1-1806 ### LTnewLM_27 Liftoff gene 1011502 1013708 . + . ID=LTnewLM_270030600;coverage=1.0;sequence_ID=0.997;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.02_0 LTnewLM_27 Liftoff rRNA 1011502 1013708 . + . ID=LTnewLM_270030600:rRNA;Parent=LTnewLM_270030600;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1013844 1014107 . + . ID=LTnewLM_270030700;coverage=0.932;sequence_ID=0.925;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.07_0 LTnewLM_27 Liftoff rRNA 1013844 1014107 . + . ID=LTnewLM_270030700:rRNA;Parent=LTnewLM_270030700;extra_copy_number=0 ### LTnewLM_27 GenomeTools gene 1013937 1014104 108 + . ID=LTnewLM_270030800 LTnewLM_27 INFERNAL rRNA 1013937 1014104 108 + . ID=LTnewLM_270030800:rRNA;Parent=LTnewLM_270030800;gc=0.46;evalue=3.5e-28;score=107.5;model_name=5_8S_rRNA;model_acc=RF00002;model_range=1-154 ### LTnewLM_27 Liftoff gene 1014738 1016518 . + . ID=LTnewLM_270030900;coverage=1.0;sequence_ID=0.996;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.13_0 LTnewLM_27 Liftoff rRNA 1014738 1016518 . + . ID=LTnewLM_270030900:rRNA;Parent=LTnewLM_270030900;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1016611 1016823 . + . ID=LTnewLM_270031000;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.22_0 LTnewLM_27 Liftoff rRNA 1016611 1016823 . + . ID=LTnewLM_270031000:rRNA;Parent=LTnewLM_270031000;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1017086 1018609 . + . ID=LTnewLM_270031100;coverage=0.999;sequence_ID=0.999;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.28_0 LTnewLM_27 Liftoff rRNA 1017086 1018609 . + . ID=LTnewLM_270031100:rRNA;Parent=LTnewLM_270031100;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1018638 1018820 . + . ID=LTnewLM_270031200;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.34_0 LTnewLM_27 Liftoff rRNA 1018638 1018820 . + . ID=LTnewLM_270031200:rRNA;Parent=LTnewLM_270031200;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1019309 1019381 . + . ID=LTnewLM_270031300;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.40_0 LTnewLM_27 Liftoff rRNA 1019309 1019381 . + . ID=LTnewLM_270031300:rRNA;Parent=LTnewLM_270031300;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1019566 1019694 . + . ID=LTnewLM_270031400;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.46_0 LTnewLM_27 Liftoff rRNA 1019566 1019694 . + . ID=LTnewLM_270031400:rRNA;Parent=LTnewLM_270031400;extra_copy_number=0 ### LTnewLM_27 GenomeTools gene 1022780 1024982 990 + . ID=LTnewLM_270031500 LTnewLM_27 INFERNAL rRNA 1022780 1024982 990 + . ID=LTnewLM_270031500:rRNA;Parent=LTnewLM_270031500;gc=0.50;evalue=0;score=989.8;model_name=SSU_rRNA_eukarya;model_acc=RF01960;model_range=1-1806 ### LTnewLM_27 Liftoff gene 1022780 1024983 . + . ID=LTnewLM_270031600;coverage=1.0;sequence_ID=0.999;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.01_0 LTnewLM_27 Liftoff rRNA 1022780 1024983 . + . ID=LTnewLM_270031600:rRNA;Parent=LTnewLM_270031600;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1025130 1025394 . + . ID=LTnewLM_270031700;coverage=0.929;sequence_ID=0.908;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.09_0 LTnewLM_27 Liftoff rRNA 1025130 1025394 . + . ID=LTnewLM_270031700:rRNA;Parent=LTnewLM_270031700;extra_copy_number=0 ### LTnewLM_27 GenomeTools gene 1025224 1025391 108 + . ID=LTnewLM_270031800 LTnewLM_27 INFERNAL rRNA 1025224 1025391 108 + . ID=LTnewLM_270031800:rRNA;Parent=LTnewLM_270031800;gc=0.46;evalue=3.5e-28;score=107.5;model_name=5_8S_rRNA;model_acc=RF00002;model_range=1-154 ### LTnewLM_27 Liftoff gene 1026026 1027805 . + . ID=LTnewLM_270031900;coverage=1.0;sequence_ID=0.997;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.18_0 LTnewLM_27 Liftoff rRNA 1026026 1027805 . + . ID=LTnewLM_270031900:rRNA;Parent=LTnewLM_270031900;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1027898 1028110 . + . ID=LTnewLM_270032000;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.24_0 LTnewLM_27 Liftoff rRNA 1027898 1028110 . + . ID=LTnewLM_270032000:rRNA;Parent=LTnewLM_270032000;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1028371 1029895 . + . ID=LTnewLM_270032100;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.30_0 LTnewLM_27 Liftoff rRNA 1028371 1029895 . + . ID=LTnewLM_270032100:rRNA;Parent=LTnewLM_270032100;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1029928 1030110 . + . ID=LTnewLM_270032200;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.36_0 LTnewLM_27 Liftoff rRNA 1029928 1030110 . + . ID=LTnewLM_270032200:rRNA;Parent=LTnewLM_270032200;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1030571 1030643 . + . ID=LTnewLM_270032300;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.42_0 LTnewLM_27 Liftoff rRNA 1030571 1030643 . + . ID=LTnewLM_270032300:rRNA;Parent=LTnewLM_270032300;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1030893 1031021 . + . ID=LTnewLM_270032400;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.49_0 LTnewLM_27 Liftoff rRNA 1030893 1031021 . + . ID=LTnewLM_270032400:rRNA;Parent=LTnewLM_270032400;extra_copy_number=0 ### LTnewLM_27 GenomeTools gene 1033397 1035599 990 + . ID=LTnewLM_270032500 LTnewLM_27 INFERNAL rRNA 1033397 1035599 990 + . ID=LTnewLM_270032500:rRNA;Parent=LTnewLM_270032500;gc=0.50;evalue=0;score=989.8;model_name=SSU_rRNA_eukarya;model_acc=RF01960;model_range=1-1806 ### LTnewLM_27 Liftoff gene 1033397 1035600 . + . ID=LTnewLM_270032600;coverage=1.0;sequence_ID=0.999;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.06_0 LTnewLM_27 Liftoff rRNA 1033397 1035600 . + . ID=LTnewLM_270032600:rRNA;Parent=LTnewLM_270032600;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1035746 1036012 . + . ID=LTnewLM_270032700;coverage=0.936;sequence_ID=0.919;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.12_0 LTnewLM_27 Liftoff rRNA 1035746 1036012 . + . ID=LTnewLM_270032700:rRNA;Parent=LTnewLM_270032700;extra_copy_number=0 ### LTnewLM_27 GenomeTools gene 1035842 1036009 108 + . ID=LTnewLM_270032800 LTnewLM_27 INFERNAL rRNA 1035842 1036009 108 + . ID=LTnewLM_270032800:rRNA;Parent=LTnewLM_270032800;gc=0.46;evalue=3.5e-28;score=107.5;model_name=5_8S_rRNA;model_acc=RF00002;model_range=1-154 ### LTnewLM_27 Liftoff gene 1036636 1038415 . + . ID=LTnewLM_270032900;coverage=1.0;sequence_ID=0.997;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.17_0 LTnewLM_27 Liftoff rRNA 1036636 1038415 . + . ID=LTnewLM_270032900:rRNA;Parent=LTnewLM_270032900;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1038508 1038720 . + . ID=LTnewLM_270033000;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.23_0 LTnewLM_27 Liftoff rRNA 1038508 1038720 . + . ID=LTnewLM_270033000:rRNA;Parent=LTnewLM_270033000;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1038986 1040510 . + . ID=LTnewLM_270033100;coverage=1.0;sequence_ID=0.999;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.29_0 LTnewLM_27 Liftoff rRNA 1038986 1040510 . + . ID=LTnewLM_270033100:rRNA;Parent=LTnewLM_270033100;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1040541 1040723 . + . ID=LTnewLM_270033200;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.35_0 LTnewLM_27 Liftoff rRNA 1040541 1040723 . + . ID=LTnewLM_270033200:rRNA;Parent=LTnewLM_270033200;extra_copy_number=0 ### LTnewLM_27 Liftoff gene 1041210 1041282 . + . ID=LTnewLM_270033300;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.27.rRNA.41_0 LTnewLM_27 Liftoff rRNA 1041210 1041282 . + . ID=LTnewLM_270033300:rRNA;Parent=LTnewLM_270033300;extra_copy_number=0 ### LTnewLM_27 AUGUSTUS gene 1042388 1043857 1 + . ID=LTnewLM_270033400 LTnewLM_27 AUGUSTUS mRNA 1042388 1043857 1 + . ID=LTnewLM_270033400.1;Parent=LTnewLM_270033400 LTnewLM_27 AUGUSTUS CDS 1042388 1043857 1 + 0 ID=LTnewLM_270033400.1:CDS:1;Parent=LTnewLM_270033400.1 ### LTnewLM_27 . polypeptide 1042388 1043857 . + . ID=LTnewLM_270033400.1:pep;Derives_from=LTnewLM_270033400.1;orthologous_to=LmjF.27.2340_mRNA;ortholog_cluster=OG0003410;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_27 Pfam protein_match 1042475 1043377 . + . Parent=LTnewLM_270033400.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain LTnewLM_27 Pfam protein_match 1043399 1043827 . + . Parent=LTnewLM_270033400.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal ### LTnewLM_27 AUGUSTUS gene 1044661 1045323 1 + . ID=LTnewLM_270033500 LTnewLM_27 AUGUSTUS mRNA 1044661 1045323 1 + . ID=LTnewLM_270033500.1;Parent=LTnewLM_270033500 LTnewLM_27 AUGUSTUS CDS 1044661 1045323 1 + 0 ID=LTnewLM_270033500.1:CDS:1;Parent=LTnewLM_270033500.1 ### LTnewLM_27 . polypeptide 1044661 1045323 . + . ID=LTnewLM_270033500.1:pep;Derives_from=LTnewLM_270033500.1;orthologous_to=LmjF.27.2350_mRNA;ortholog_cluster=OG0003411;product=term%3DRegulated-SNARE-like domain/Synaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13774|Pfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_27 Pfam protein_match 1044763 1044978 . + . Parent=LTnewLM_270033500.1:pep;Name=PF13774;signature_desc=Regulated-SNARE-like domain LTnewLM_27 Pfam protein_match 1045036 1045299 . + . Parent=LTnewLM_270033500.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_27 AUGUSTUS gene 1045727 1046881 1 + . ID=LTnewLM_270033600 LTnewLM_27 AUGUSTUS mRNA 1045727 1046881 1 + . ID=LTnewLM_270033600.1;Parent=LTnewLM_270033600 LTnewLM_27 AUGUSTUS CDS 1045727 1046881 1 + 0 ID=LTnewLM_270033600.1:CDS:1;Parent=LTnewLM_270033600.1 ### LTnewLM_27 . polypeptide 1045727 1046881 . + . ID=LTnewLM_270033600.1:pep;Derives_from=LTnewLM_270033600.1;orthologous_to=LmjF.27.2360_mRNA;ortholog_cluster=OG0003412;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1047347 1047808 1 + . ID=LTnewLM_270033700 LTnewLM_27 AUGUSTUS mRNA 1047347 1047808 1 + . ID=LTnewLM_270033700.1;Parent=LTnewLM_270033700 LTnewLM_27 AUGUSTUS CDS 1047347 1047808 1 + 0 ID=LTnewLM_270033700.1:CDS:1;Parent=LTnewLM_270033700.1 ### LTnewLM_27 . polypeptide 1047347 1047808 . + . ID=LTnewLM_270033700.1:pep;Derives_from=LTnewLM_270033700.1;orthologous_to=LmjF.27.2370_mRNA;ortholog_cluster=OG0003413;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1048146 1048487 1 + . ID=LTnewLM_270033800 LTnewLM_27 AUGUSTUS mRNA 1048146 1048487 1 + . ID=LTnewLM_270033800.1;Parent=LTnewLM_270033800 LTnewLM_27 AUGUSTUS CDS 1048146 1048487 1 + 0 ID=LTnewLM_270033800.1:CDS:1;Parent=LTnewLM_270033800.1 ### LTnewLM_27 . polypeptide 1048146 1048487 . + . ID=LTnewLM_270033800.1:pep;Derives_from=LTnewLM_270033800.1;orthologous_to=LmjF.27.2380_mRNA;ortholog_cluster=OG0003414;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1049080 1050549 1 + . ID=LTnewLM_270033900 LTnewLM_27 AUGUSTUS mRNA 1049080 1050549 1 + . ID=LTnewLM_270033900.1;Parent=LTnewLM_270033900 LTnewLM_27 AUGUSTUS CDS 1049080 1050549 1 + 0 ID=LTnewLM_270033900.1:CDS:1;Parent=LTnewLM_270033900.1 ### LTnewLM_27 . polypeptide 1049080 1050549 . + . ID=LTnewLM_270033900.1:pep;Derives_from=LTnewLM_270033900.1;orthologous_to=LmjF.27.2390_mRNA;ortholog_cluster=OG0003415;product=term%3DTetratricopeptide repeat/Potential Monad-binding region of RPAP3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF13877;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 1049563 1049661 . + . Parent=LTnewLM_270033900.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 1050196 1050450 . + . Parent=LTnewLM_270033900.1:pep;Name=PF13877;signature_desc=Potential Monad-binding region of RPAP3 ### LTnewLM_27 AUGUSTUS gene 1051531 1052721 1 + . ID=LTnewLM_270034000 LTnewLM_27 AUGUSTUS mRNA 1051531 1052721 1 + . ID=LTnewLM_270034000.1;Parent=LTnewLM_270034000 LTnewLM_27 AUGUSTUS CDS 1051531 1052721 1 + 0 ID=LTnewLM_270034000.1:CDS:1;Parent=LTnewLM_270034000.1 ### LTnewLM_27 . polypeptide 1051531 1052721 . + . ID=LTnewLM_270034000.1:pep;Derives_from=LTnewLM_270034000.1;orthologous_to=LmjF.27.2400_mRNA;ortholog_cluster=OG0003416;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_27 Pfam protein_match 1051549 1051728 . + . Parent=LTnewLM_270034000.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_27 Pfam protein_match 1051846 1052520 . + . Parent=LTnewLM_270034000.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_27 Pfam protein_match 1051927 1052124 . + . Parent=LTnewLM_270034000.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 ### LTnewLM_27 AUGUSTUS gene 1054812 1055930 1 + . ID=LTnewLM_270034100 LTnewLM_27 AUGUSTUS mRNA 1054812 1055930 1 + . ID=LTnewLM_270034100.1;Parent=LTnewLM_270034100 LTnewLM_27 AUGUSTUS CDS 1054812 1055930 1 + 0 ID=LTnewLM_270034100.1:CDS:1;Parent=LTnewLM_270034100.1 ### LTnewLM_27 . polypeptide 1054812 1055930 . + . ID=LTnewLM_270034100.1:pep;Derives_from=LTnewLM_270034100.1;orthologous_to=LmjF.27.2410_mRNA;ortholog_cluster=OG0003417;product=term%3DAldo/keto reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00248 LTnewLM_27 Pfam protein_match 1054908 1055735 . + . Parent=LTnewLM_270034100.1:pep;Name=PF00248;signature_desc=Aldo/keto reductase family ### LTnewLM_27 AUGUSTUS gene 1056413 1057255 1 + . ID=LTnewLM_270034200 LTnewLM_27 AUGUSTUS mRNA 1056413 1057255 1 + . ID=LTnewLM_270034200.1;Parent=LTnewLM_270034200 LTnewLM_27 AUGUSTUS CDS 1056413 1057255 1 + 0 ID=LTnewLM_270034200.1:CDS:1;Parent=LTnewLM_270034200.1 ### LTnewLM_27 . polypeptide 1056413 1057255 . + . ID=LTnewLM_270034200.1:pep;Derives_from=LTnewLM_270034200.1;orthologous_to=LmjF.27.2420_mRNA;ortholog_cluster=OG0003418;product=term%3DTBPIP/Hop2 winged helix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07106 LTnewLM_27 Pfam protein_match 1056458 1056634 . + . Parent=LTnewLM_270034200.1:pep;Name=PF07106;signature_desc=TBPIP/Hop2 winged helix domain ### LTnewLM_27 AUGUSTUS gene 1057867 1059519 1 + . ID=LTnewLM_270034300 LTnewLM_27 AUGUSTUS mRNA 1057867 1059519 1 + . ID=LTnewLM_270034300.1;Parent=LTnewLM_270034300 LTnewLM_27 AUGUSTUS CDS 1057867 1059519 1 + 0 ID=LTnewLM_270034300.1:CDS:1;Parent=LTnewLM_270034300.1 ### LTnewLM_27 . polypeptide 1057867 1059519 . + . ID=LTnewLM_270034300.1:pep;Derives_from=LTnewLM_270034300.1;orthologous_to=LmjF.27.2430_mRNA;ortholog_cluster=OG0003419;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1059949 1060674 1 + . ID=LTnewLM_270034400 LTnewLM_27 AUGUSTUS mRNA 1059949 1060674 1 + . ID=LTnewLM_270034400.1;Parent=LTnewLM_270034400 LTnewLM_27 AUGUSTUS CDS 1059949 1060674 1 + 0 ID=LTnewLM_270034400.1:CDS:1;Parent=LTnewLM_270034400.1 ### LTnewLM_27 . polypeptide 1059949 1060674 . + . ID=LTnewLM_270034400.1:pep;Derives_from=LTnewLM_270034400.1;orthologous_to=LmjF.27.2440_mRNA;ortholog_cluster=OG0003420;product=term%3Dshort chain dehydrogenase/KR domain/NAD dependent epimerase/dehydratase family/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF08659|Pfam:PF01370|Pfam:PF13561;Ontology_term=GO:0003824,GO:0016491,GO:0008152,GO:0050662 LTnewLM_27 Pfam protein_match 1059970 1060530 . + . Parent=LTnewLM_270034400.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_27 Pfam protein_match 1059979 1060440 . + . Parent=LTnewLM_270034400.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_27 Pfam protein_match 1059979 1060485 . + . Parent=LTnewLM_270034400.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_27 Pfam protein_match 1060072 1060668 . + . Parent=LTnewLM_270034400.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_27 AUGUSTUS gene 1061197 1062540 1 + . ID=LTnewLM_270034500 LTnewLM_27 AUGUSTUS mRNA 1061197 1062540 1 + . ID=LTnewLM_270034500.1;Parent=LTnewLM_270034500 LTnewLM_27 AUGUSTUS CDS 1061197 1062540 1 + 0 ID=LTnewLM_270034500.1:CDS:1;Parent=LTnewLM_270034500.1 ### LTnewLM_27 . polypeptide 1061197 1062540 . + . ID=LTnewLM_270034500.1:pep;Derives_from=LTnewLM_270034500.1;orthologous_to=LmjF.27.2450_mRNA;ortholog_cluster=OG0003421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1063276 1064175 1 + . ID=LTnewLM_270034600 LTnewLM_27 AUGUSTUS mRNA 1063276 1064175 1 + . ID=LTnewLM_270034600.1;Parent=LTnewLM_270034600 LTnewLM_27 AUGUSTUS CDS 1063276 1064175 1 + 0 ID=LTnewLM_270034600.1:CDS:1;Parent=LTnewLM_270034600.1 ### LTnewLM_27 . polypeptide 1063276 1064175 . + . ID=LTnewLM_270034600.1:pep;Derives_from=LTnewLM_270034600.1;orthologous_to=LmjF.27.2460_mRNA;ortholog_cluster=OG0003422;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 1063330 1064142 . + . Parent=LTnewLM_270034600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_27 Pfam protein_match 1063336 1064163 . + . Parent=LTnewLM_270034600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 1064864 1066546 1 + . ID=LTnewLM_270034700 LTnewLM_27 AUGUSTUS mRNA 1064864 1066546 1 + . ID=LTnewLM_270034700.1;Parent=LTnewLM_270034700 LTnewLM_27 AUGUSTUS CDS 1064864 1066546 1 + 0 ID=LTnewLM_270034700.1:CDS:1;Parent=LTnewLM_270034700.1 ### LTnewLM_27 . polypeptide 1064864 1066546 . + . ID=LTnewLM_270034700.1:pep;Derives_from=LTnewLM_270034700.1;orthologous_to=LmjF.27.2470_mRNA;ortholog_cluster=OG0003423;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_27 Pfam protein_match 1064918 1065724 . + . Parent=LTnewLM_270034700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_27 Pfam protein_match 1064924 1065712 . + . Parent=LTnewLM_270034700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_27 AUGUSTUS gene 1068235 1069776 1 + . ID=LTnewLM_270034800 LTnewLM_27 AUGUSTUS mRNA 1068235 1069776 1 + . ID=LTnewLM_270034800.1;Parent=LTnewLM_270034800 LTnewLM_27 AUGUSTUS CDS 1068235 1069776 1 + 0 ID=LTnewLM_270034800.1:CDS:1;Parent=LTnewLM_270034800.1 ### LTnewLM_27 . polypeptide 1068235 1069776 . + . ID=LTnewLM_270034800.1:pep;Derives_from=LTnewLM_270034800.1;orthologous_to=LmjF.27.2480_mRNA;ortholog_cluster=OG0003424;product=term%3DPrp19/Pso4-like/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08606|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_27 Pfam protein_match 1068445 1068624 . + . Parent=LTnewLM_270034800.1:pep;Name=PF08606;signature_desc=Prp19/Pso4-like LTnewLM_27 Pfam protein_match 1069399 1069479 . + . Parent=LTnewLM_270034800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_27 . pseudogene 1070375 1071806 . + . ID=LTnewLM_270034900:pseudogene;coverage=0.994;sequence_ID=0.957;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.2490_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 1070375 1071806 . + . ID=LTnewLM_270034900.1;Parent=LTnewLM_270034900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 1070375 1071806 . + . ID=LTnewLM_270034900.1:pseudogenic_exon:1;Parent=LTnewLM_270034900.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 1070375 1071806 . + . ID=LTnewLM_270034900.1:pep;Derives_from=LTnewLM_270034900.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 1072433 1072846 1 + . ID=LTnewLM_270035000 LTnewLM_27 AUGUSTUS mRNA 1072433 1072846 1 + . ID=LTnewLM_270035000.1;Parent=LTnewLM_270035000 LTnewLM_27 AUGUSTUS CDS 1072433 1072846 1 + 0 ID=LTnewLM_270035000.1:CDS:1;Parent=LTnewLM_270035000.1 ### LTnewLM_27 . polypeptide 1072433 1072846 . + . ID=LTnewLM_270035000.1:pep;Derives_from=LTnewLM_270035000.1;orthologous_to=LmjF.27.2500_mRNA;ortholog_cluster=OG0003425;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1073642 1086658 1 + . ID=LTnewLM_270035100 LTnewLM_27 AUGUSTUS mRNA 1073642 1086658 1 + . ID=LTnewLM_270035100.1;Parent=LTnewLM_270035100 LTnewLM_27 AUGUSTUS CDS 1073642 1086658 1 + 0 ID=LTnewLM_270035100.1:CDS:1;Parent=LTnewLM_270035100.1 ### LTnewLM_27 . polypeptide 1073642 1086658 . + . ID=LTnewLM_270035100.1:pep;Derives_from=LTnewLM_270035100.1;orthologous_to=LmjF.27.2590_mRNA;ortholog_cluster=OG0003426;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA domain (dynein-related subfamily)/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF17852|Pfam:PF12775|Pfam:PF07728|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_27 Pfam protein_match 1076816 1078060 . + . Parent=LTnewLM_270035100.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_27 Pfam protein_match 1078463 1079440 . + . Parent=LTnewLM_270035100.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_27 Pfam protein_match 1079939 1080364 . + . Parent=LTnewLM_270035100.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_27 Pfam protein_match 1080386 1080925 . + . Parent=LTnewLM_270035100.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_27 Pfam protein_match 1080491 1080898 . + . Parent=LTnewLM_270035100.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 1081025 1081267 . + . Parent=LTnewLM_270035100.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_27 Pfam protein_match 1081457 1082242 . + . Parent=LTnewLM_270035100.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_27 Pfam protein_match 1082285 1083328 . + . Parent=LTnewLM_270035100.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_27 Pfam protein_match 1083416 1084072 . + . Parent=LTnewLM_270035100.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_27 Pfam protein_match 1084808 1085161 . + . Parent=LTnewLM_270035100.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_27 Pfam protein_match 1085267 1085683 . + . Parent=LTnewLM_270035100.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_27 Pfam protein_match 1085708 1086637 . + . Parent=LTnewLM_270035100.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_27 AUGUSTUS gene 1089902 1091716 1 + . ID=LTnewLM_270035200 LTnewLM_27 AUGUSTUS mRNA 1089902 1091716 1 + . ID=LTnewLM_270035200.1;Parent=LTnewLM_270035200 LTnewLM_27 AUGUSTUS CDS 1089902 1091716 1 + 0 ID=LTnewLM_270035200.1:CDS:1;Parent=LTnewLM_270035200.1 ### LTnewLM_27 . polypeptide 1089902 1091716 . + . ID=LTnewLM_270035200.1:pep;Derives_from=LTnewLM_270035200.1;orthologous_to=LmjF.27.2600_mRNA;ortholog_cluster=OG0003427;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1092530 1093893 0.55 + . ID=LTnewLM_270035300 LTnewLM_27 AUGUSTUS mRNA 1092530 1093893 0.55 + . ID=LTnewLM_270035300.1;Parent=LTnewLM_270035300 LTnewLM_27 AUGUSTUS CDS 1092530 1093500 0.55 + 0 ID=LTnewLM_270035300.1:CDS:1;Parent=LTnewLM_270035300.1 LTnewLM_27 AUGUSTUS CDS 1093563 1093893 0.55 + 1 ID=LTnewLM_270035300.1:CDS:2;Parent=LTnewLM_270035300.1 ### LTnewLM_27 . polypeptide 1092530 1093893 . + . ID=LTnewLM_270035300.1:pep;Derives_from=LTnewLM_270035300.1;orthologous_to=LTnewLM_020012500.1,LmjF.02.0690_mRNA,LmjF.27.2610_mRNA;ortholog_cluster=OG0000145;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1094681 1097485 1 + . ID=LTnewLM_270035400 LTnewLM_27 AUGUSTUS mRNA 1094681 1097485 1 + . ID=LTnewLM_270035400.1;Parent=LTnewLM_270035400 LTnewLM_27 AUGUSTUS CDS 1094681 1097485 1 + 0 ID=LTnewLM_270035400.1:CDS:1;Parent=LTnewLM_270035400.1 ### LTnewLM_27 . polypeptide 1094681 1097485 . + . ID=LTnewLM_270035400.1:pep;Derives_from=LTnewLM_270035400.1;orthologous_to=LTnewLM_020012600.1,LmjF.02.0700_mRNA,LmjF.27.2620_mRNA;ortholog_cluster=OG0000146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1099182 1101636 0.55 + . ID=LTnewLM_270035500 LTnewLM_27 AUGUSTUS mRNA 1099182 1101636 0.55 + . ID=LTnewLM_270035500.1;Parent=LTnewLM_270035500 LTnewLM_27 AUGUSTUS CDS 1099182 1100074 0.94 + 0 ID=LTnewLM_270035500.1:CDS:1;Parent=LTnewLM_270035500.1 LTnewLM_27 AUGUSTUS CDS 1100205 1101636 0.55 + 1 ID=LTnewLM_270035500.1:CDS:2;Parent=LTnewLM_270035500.1 ### LTnewLM_27 . polypeptide 1099182 1101636 . + . ID=LTnewLM_270035500.1:pep;Derives_from=LTnewLM_270035500.1;orthologous_to=LTnewLM_020012700.1,LmjF.02.0710_mRNA,LmjF.27.2630_mRNA;ortholog_cluster=OG0000147;product=term%3DATPase family associated with various cellular activities (AAA)/AAA domain (Cdc48 subfamily)/AAA domain (dynein-related subfamily)/C-terminal%2C D2-small domain%2C of ClpB protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF07724|Pfam:PF07728|Pfam:PF10431;Ontology_term=GO:0016887,GO:0005524 LTnewLM_27 Pfam protein_match 1099611 1100015 . + . Parent=LTnewLM_270035500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 1100664 1101155 . + . Parent=LTnewLM_270035500.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 1100679 1101032 . + . Parent=LTnewLM_270035500.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_27 Pfam protein_match 1100682 1101035 . + . Parent=LTnewLM_270035500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_27 Pfam protein_match 1101174 1101410 . + . Parent=LTnewLM_270035500.1:pep;Name=PF10431;signature_desc=C-terminal%2C D2-small domain%2C of ClpB protein ### LTnewLM_27 Liftoff gene 1102734 1102976 . + . ID=LTnewLM_270035600;coverage=1.0;sequence_ID=0.938;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.27.2640_0 LTnewLM_27 Liftoff mRNA 1102734 1102976 . + . ID=LTnewLM_270035600.1;Parent=LTnewLM_270035600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_27 Liftoff CDS 1102734 1102976 . + 0 ID=LTnewLM_270035600.1:CDS:1;Parent=LTnewLM_270035600.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 1102734 1102976 . + . ID=LTnewLM_270035600.1:pep;Derives_from=LTnewLM_270035600.1;orthologous_to=LmjF.02.0720_mRNA,LmjF.27.2640_mRNA;ortholog_cluster=OG0000415;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1104149 1104694 1 + . ID=LTnewLM_270035700 LTnewLM_27 AUGUSTUS mRNA 1104149 1104694 1 + . ID=LTnewLM_270035700.1;Parent=LTnewLM_270035700 LTnewLM_27 AUGUSTUS CDS 1104149 1104694 1 + 0 ID=LTnewLM_270035700.1:CDS:1;Parent=LTnewLM_270035700.1 ### LTnewLM_27 . polypeptide 1104149 1104694 . + . ID=LTnewLM_270035700.1:pep;Derives_from=LTnewLM_270035700.1;orthologous_to=LTnewLM_020012900.1,LmjF.27.2650_mRNA;ortholog_cluster=OG0000376;product=term%3DEnoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13561 LTnewLM_27 Pfam protein_match 1104161 1104457 . + . Parent=LTnewLM_270035700.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_27 AUGUSTUS gene 1105104 1105598 1 + . ID=LTnewLM_270035800 LTnewLM_27 AUGUSTUS mRNA 1105104 1105598 1 + . ID=LTnewLM_270035800.1;Parent=LTnewLM_270035800 LTnewLM_27 AUGUSTUS CDS 1105104 1105598 1 + 0 ID=LTnewLM_270035800.1:CDS:1;Parent=LTnewLM_270035800.1 ### LTnewLM_27 . polypeptide 1105104 1105598 . + . ID=LTnewLM_270035800.1:pep;Derives_from=LTnewLM_270035800.1;orthologous_to=LTnewLM_020013000.1;ortholog_cluster=OG0001905;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 AUGUSTUS gene 1105819 1106241 0.99 + . ID=LTnewLM_270035900 LTnewLM_27 AUGUSTUS mRNA 1105819 1106241 0.99 + . ID=LTnewLM_270035900.1;Parent=LTnewLM_270035900 LTnewLM_27 AUGUSTUS CDS 1105819 1106241 0.99 + 0 ID=LTnewLM_270035900.1:CDS:1;Parent=LTnewLM_270035900.1 ### LTnewLM_27 . polypeptide 1105819 1106241 . + . ID=LTnewLM_270035900.1:pep;Derives_from=LTnewLM_270035900.1;orthologous_to=LTnewLM_310028600.1,LmjF.31.1870_mRNA,LmjF.31.1880_mRNA;ortholog_cluster=OG0000196;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_27 . pseudogene 1107505 1109544 . + . ID=LTnewLM_270036000:pseudogene;coverage=1.0;sequence_ID=0.963;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.27.2660_0;has_internal_stop=true LTnewLM_27 . pseudogenic_transcript 1107505 1109544 . + . ID=LTnewLM_270036000.1;Parent=LTnewLM_270036000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_27 . pseudogenic_exon 1107505 1109544 . + . ID=LTnewLM_270036000.1:pseudogenic_exon:1;Parent=LTnewLM_270036000.1;extra_copy_number=0 ### LTnewLM_27 . polypeptide 1107505 1109544 . + . ID=LTnewLM_270036000.1:pep;Derives_from=LTnewLM_270036000.1;orthologous_to=LTnewLM_010013600.1,LTnewLM_020013100.1,LmjF.01.0830_mRNA,LmjF.02.0740_mRNA,LmjF.27.2660_mRNA;ortholog_cluster=OG0000077;product=term%3DPeptidase family M3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01432;Ontology_term=GO:0004222,GO:0006508 LTnewLM_27 Pfam protein_match 1108183 1108866 . + . Parent=LTnewLM_270036000.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 LTnewLM_27 Pfam protein_match 1109140 1109526 . + . Parent=LTnewLM_270036000.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 ### LTnewLM_27 . polypeptide 1114048 1114241 . - . ID=LTnewLM_270036100.1:pep;Derives_from=LTnewLM_270036100.1;product=term%3Dhypothetical protein ### LTnewLM_27 AUGUSTUS gene 1114048 1114889 0.82 - . ID=LTnewLM_270036100;fiveEndPartial=true;End_range=.,. LTnewLM_27 AUGUSTUS mRNA 1114048 1114889 0.82 - . ID=LTnewLM_270036100.1;Parent=LTnewLM_270036100 LTnewLM_27 AUGUSTUS CDS 1114048 1114241 0.82 - 2 ID=LTnewLM_270036100.1:CDS:1;Parent=LTnewLM_270036100.1 ### LTnewLM_28 AUGUSTUS gene 1 1425 0.96 + . ID=LTnewLM_280005000;fiveEndPartial=true;Start_range=.,. LTnewLM_28 AUGUSTUS mRNA 1 1425 0.96 + . ID=LTnewLM_280005000.1;Parent=LTnewLM_280005000 LTnewLM_28 AUGUSTUS CDS 1167 1425 0.96 + 1 ID=LTnewLM_280005000.1:CDS:1;Parent=LTnewLM_280005000.1 ### LTnewLM_28 . contig 1 1170176 . + . Name=LTnewLM_CTG000028 LTnewLM_28 . polypeptide 1167 1425 . + . ID=LTnewLM_280005000.1:pep;Derives_from=LTnewLM_280005000.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 5713 7365 1 + . ID=LTnewLM_280005100 LTnewLM_28 AUGUSTUS mRNA 5713 7365 1 + . ID=LTnewLM_280005100.1;Parent=LTnewLM_280005100 LTnewLM_28 AUGUSTUS CDS 5713 7365 1 + 0 ID=LTnewLM_280005100.1:CDS:1;Parent=LTnewLM_280005100.1 ### LTnewLM_28 . polypeptide 5713 7365 . + . ID=LTnewLM_280005100.1:pep;Derives_from=LTnewLM_280005100.1;orthologous_to=LmjF.28.0010_mRNA;ortholog_cluster=OG0003428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 7987 8388 1 + . ID=LTnewLM_280005200 LTnewLM_28 AUGUSTUS mRNA 7987 8388 1 + . ID=LTnewLM_280005200.1;Parent=LTnewLM_280005200 LTnewLM_28 AUGUSTUS CDS 7987 8388 1 + 0 ID=LTnewLM_280005200.1:CDS:1;Parent=LTnewLM_280005200.1 ### LTnewLM_28 . polypeptide 7987 8388 . + . ID=LTnewLM_280005200.1:pep;Derives_from=LTnewLM_280005200.1;orthologous_to=LmjF.28.0020_mRNA;ortholog_cluster=OG0003429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 8932 10227 1 + . ID=LTnewLM_280005300 LTnewLM_28 AUGUSTUS mRNA 8932 10227 1 + . ID=LTnewLM_280005300.1;Parent=LTnewLM_280005300 LTnewLM_28 AUGUSTUS CDS 8932 10227 1 + 0 ID=LTnewLM_280005300.1:CDS:1;Parent=LTnewLM_280005300.1 ### LTnewLM_28 . polypeptide 8932 10227 . + . ID=LTnewLM_280005300.1:pep;Derives_from=LTnewLM_280005300.1;orthologous_to=LmjF.28.0030_mRNA;ortholog_cluster=OG0003430;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_28 Pfam protein_match 9106 9531 . + . Parent=LTnewLM_280005300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_28 AUGUSTUS gene 10656 13364 1 + . ID=LTnewLM_280005400 LTnewLM_28 AUGUSTUS mRNA 10656 13364 1 + . ID=LTnewLM_280005400.1;Parent=LTnewLM_280005400 LTnewLM_28 AUGUSTUS CDS 10656 13364 1 + 0 ID=LTnewLM_280005400.1:CDS:1;Parent=LTnewLM_280005400.1 ### LTnewLM_28 . polypeptide 10656 13364 . + . ID=LTnewLM_280005400.1:pep;Derives_from=LTnewLM_280005400.1;orthologous_to=LmjF.28.0040_mRNA;ortholog_cluster=OG0003431;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 14108 15646 1 + . ID=LTnewLM_280005500 LTnewLM_28 AUGUSTUS mRNA 14108 15646 1 + . ID=LTnewLM_280005500.1;Parent=LTnewLM_280005500 LTnewLM_28 AUGUSTUS CDS 14108 15646 1 + 0 ID=LTnewLM_280005500.1:CDS:1;Parent=LTnewLM_280005500.1 ### LTnewLM_28 . polypeptide 14108 15646 . + . ID=LTnewLM_280005500.1:pep;Derives_from=LTnewLM_280005500.1;orthologous_to=LmjF.28.0050_mRNA;ortholog_cluster=OG0003432;product=term%3DSperm tail%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14772 LTnewLM_28 Pfam protein_match 14186 14479 . + . Parent=LTnewLM_280005500.1:pep;Name=PF14772;signature_desc=Sperm tail ### LTnewLM_28 AUGUSTUS gene 16427 17884 1 + . ID=LTnewLM_280005600 LTnewLM_28 AUGUSTUS mRNA 16427 17884 1 + . ID=LTnewLM_280005600.1;Parent=LTnewLM_280005600 LTnewLM_28 AUGUSTUS CDS 16427 17884 1 + 0 ID=LTnewLM_280005600.1:CDS:1;Parent=LTnewLM_280005600.1 ### LTnewLM_28 . polypeptide 16427 17884 . + . ID=LTnewLM_280005600.1:pep;Derives_from=LTnewLM_280005600.1;orthologous_to=LmjF.28.0060_mRNA;ortholog_cluster=OG0003433;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 18449 20023 1 + . ID=LTnewLM_280005700 LTnewLM_28 AUGUSTUS mRNA 18449 20023 1 + . ID=LTnewLM_280005700.1;Parent=LTnewLM_280005700 LTnewLM_28 AUGUSTUS CDS 18449 20023 1 + 0 ID=LTnewLM_280005700.1:CDS:1;Parent=LTnewLM_280005700.1 ### LTnewLM_28 . polypeptide 18449 20023 . + . ID=LTnewLM_280005700.1:pep;Derives_from=LTnewLM_280005700.1;orthologous_to=LmjF.28.0070_mRNA;ortholog_cluster=OG0003434;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 20643 26831 1 + . ID=LTnewLM_280005800 LTnewLM_28 AUGUSTUS mRNA 20643 26831 1 + . ID=LTnewLM_280005800.1;Parent=LTnewLM_280005800 LTnewLM_28 AUGUSTUS CDS 20643 26831 1 + 0 ID=LTnewLM_280005800.1:CDS:1;Parent=LTnewLM_280005800.1 ### LTnewLM_28 . polypeptide 20643 26831 . + . ID=LTnewLM_280005800.1:pep;Derives_from=LTnewLM_280005800.1;orthologous_to=LmjF.28.0080_mRNA;ortholog_cluster=OG0003435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 29735 31768 1 + . ID=LTnewLM_280005900 LTnewLM_28 AUGUSTUS mRNA 29735 31768 1 + . ID=LTnewLM_280005900.1;Parent=LTnewLM_280005900 LTnewLM_28 AUGUSTUS CDS 29735 31768 1 + 0 ID=LTnewLM_280005900.1:CDS:1;Parent=LTnewLM_280005900.1 ### LTnewLM_28 . polypeptide 29735 31768 . + . ID=LTnewLM_280005900.1:pep;Derives_from=LTnewLM_280005900.1;orthologous_to=LmjF.28.0090_mRNA;ortholog_cluster=OG0003436;product=term%3DGlobin/Adenylate and Guanylate cyclase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00042|Pfam:PF00211;Ontology_term=GO:0020037,GO:0005506,GO:0009190,GO:0016849,GO:0035556 LTnewLM_28 Pfam protein_match 30230 30532 . + . Parent=LTnewLM_280005900.1:pep;Name=PF00042;signature_desc=Globin;Ontology_term=GO:0005506,GO:0020037 LTnewLM_28 Pfam protein_match 30755 30943 . + . Parent=LTnewLM_280005900.1:pep;Name=PF00042;signature_desc=Globin;Ontology_term=GO:0005506,GO:0020037 LTnewLM_28 Pfam protein_match 31061 31534 . + . Parent=LTnewLM_280005900.1:pep;Name=PF00211;signature_desc=Adenylate and Guanylate cyclase catalytic domain;Ontology_term=GO:0016849,GO:0009190,GO:0035556 ### LTnewLM_28 Liftoff gene 32873 33106 . + . ID=LTnewLM_280006000;coverage=1.0;sequence_ID=0.974;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.0100_0 LTnewLM_28 Liftoff mRNA 32873 33106 . + . ID=LTnewLM_280006000.1;Parent=LTnewLM_280006000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 32873 33106 . + 0 ID=LTnewLM_280006000.1:CDS:1;Parent=LTnewLM_280006000.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 32873 33106 . + . ID=LTnewLM_280006000.1:pep;Derives_from=LTnewLM_280006000.1;orthologous_to=LmjF.28.0100_mRNA;ortholog_cluster=OG0003437;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 34021 34638 1 + . ID=LTnewLM_280006100 LTnewLM_28 AUGUSTUS mRNA 34021 34638 1 + . ID=LTnewLM_280006100.1;Parent=LTnewLM_280006100 LTnewLM_28 AUGUSTUS CDS 34021 34638 1 + 0 ID=LTnewLM_280006100.1:CDS:1;Parent=LTnewLM_280006100.1 ### LTnewLM_28 . polypeptide 34021 34638 . + . ID=LTnewLM_280006100.1:pep;Derives_from=LTnewLM_280006100.1;orthologous_to=LmjF.28.0110_mRNA;ortholog_cluster=OG0003438;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_28 Pfam protein_match 34039 34578 . + . Parent=LTnewLM_280006100.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_28 AUGUSTUS gene 35697 36119 1 + . ID=LTnewLM_280006200 LTnewLM_28 AUGUSTUS mRNA 35697 36119 1 + . ID=LTnewLM_280006200.1;Parent=LTnewLM_280006200 LTnewLM_28 AUGUSTUS CDS 35697 36119 1 + 0 ID=LTnewLM_280006200.1:CDS:1;Parent=LTnewLM_280006200.1 ### LTnewLM_28 . polypeptide 35697 36119 . + . ID=LTnewLM_280006200.1:pep;Derives_from=LTnewLM_280006200.1;orthologous_to=LmjF.28.0120_mRNA;ortholog_cluster=OG0003439;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 36863 37411 1 + . ID=LTnewLM_280006300 LTnewLM_28 AUGUSTUS mRNA 36863 37411 1 + . ID=LTnewLM_280006300.1;Parent=LTnewLM_280006300 LTnewLM_28 AUGUSTUS CDS 36863 37411 1 + 0 ID=LTnewLM_280006300.1:CDS:1;Parent=LTnewLM_280006300.1 ### LTnewLM_28 . polypeptide 36863 37411 . + . ID=LTnewLM_280006300.1:pep;Derives_from=LTnewLM_280006300.1;orthologous_to=LmjF.28.0130_mRNA;ortholog_cluster=OG0003440;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 38225 42610 1 + . ID=LTnewLM_280006400 LTnewLM_28 AUGUSTUS mRNA 38225 42610 1 + . ID=LTnewLM_280006400.1;Parent=LTnewLM_280006400 LTnewLM_28 AUGUSTUS CDS 38225 42610 1 + 0 ID=LTnewLM_280006400.1:CDS:1;Parent=LTnewLM_280006400.1 ### LTnewLM_28 . polypeptide 38225 42610 . + . ID=LTnewLM_280006400.1:pep;Derives_from=LTnewLM_280006400.1;orthologous_to=LmjF.28.0140_mRNA;ortholog_cluster=OG0003441;product=term%3DEndonuclease/Exonuclease/phosphatase family/AMP-binding enzyme/Fumble%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372|Pfam:PF00501|Pfam:PF03630;Ontology_term=GO:0003824,GO:0008152,GO:0005524,GO:0015937,GO:0004594 LTnewLM_28 Pfam protein_match 38306 39163 . + . Parent=LTnewLM_280006400.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family LTnewLM_28 Pfam protein_match 39602 39919 . + . Parent=LTnewLM_280006400.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_28 Pfam protein_match 41366 42568 . + . Parent=LTnewLM_280006400.1:pep;Name=PF03630;signature_desc=Fumble;Ontology_term=GO:0004594,GO:0005524,GO:0015937 ### LTnewLM_28 AUGUSTUS gene 44637 46223 1 + . ID=LTnewLM_280006500 LTnewLM_28 AUGUSTUS mRNA 44637 46223 1 + . ID=LTnewLM_280006500.1;Parent=LTnewLM_280006500 LTnewLM_28 AUGUSTUS CDS 44637 46223 1 + 0 ID=LTnewLM_280006500.1:CDS:1;Parent=LTnewLM_280006500.1 ### LTnewLM_28 . polypeptide 44637 46223 . + . ID=LTnewLM_280006500.1:pep;Derives_from=LTnewLM_280006500.1;orthologous_to=LmjF.28.0150_mRNA;ortholog_cluster=OG0003442;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_28 Pfam protein_match 44832 45830 . + . Parent=LTnewLM_280006500.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_28 Pfam protein_match 45498 46031 . + . Parent=LTnewLM_280006500.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 47232 48140 1 + . ID=LTnewLM_280006600 LTnewLM_28 AUGUSTUS mRNA 47232 48140 1 + . ID=LTnewLM_280006600.1;Parent=LTnewLM_280006600 LTnewLM_28 AUGUSTUS CDS 47232 48140 1 + 0 ID=LTnewLM_280006600.1:CDS:1;Parent=LTnewLM_280006600.1 ### LTnewLM_28 . polypeptide 47232 48140 . + . ID=LTnewLM_280006600.1:pep;Derives_from=LTnewLM_280006600.1;orthologous_to=LmjF.28.0160_mRNA;ortholog_cluster=OG0003443;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 50376 51650 1 + . ID=LTnewLM_280006700 LTnewLM_28 AUGUSTUS mRNA 50376 51650 1 + . ID=LTnewLM_280006700.1;Parent=LTnewLM_280006700 LTnewLM_28 AUGUSTUS CDS 50376 51650 1 + 0 ID=LTnewLM_280006700.1:CDS:1;Parent=LTnewLM_280006700.1 ### LTnewLM_28 . polypeptide 50376 51650 . + . ID=LTnewLM_280006700.1:pep;Derives_from=LTnewLM_280006700.1;orthologous_to=LmjF.28.0170_mRNA;ortholog_cluster=OG0003444;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_28 Pfam protein_match 51228 51614 . + . Parent=LTnewLM_280006700.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_28 AUGUSTUS gene 52943 53563 1 + . ID=LTnewLM_280006800 LTnewLM_28 AUGUSTUS mRNA 52943 53563 1 + . ID=LTnewLM_280006800.1;Parent=LTnewLM_280006800 LTnewLM_28 AUGUSTUS CDS 52943 53563 1 + 0 ID=LTnewLM_280006800.1:CDS:1;Parent=LTnewLM_280006800.1 ### LTnewLM_28 . polypeptide 52943 53563 . + . ID=LTnewLM_280006800.1:pep;Derives_from=LTnewLM_280006800.1;orthologous_to=LmjF.28.0180_mRNA;ortholog_cluster=OG0003445;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 55700 57475 0.99 + . ID=LTnewLM_280006900 LTnewLM_28 AUGUSTUS mRNA 55700 57475 0.99 + . ID=LTnewLM_280006900.1;Parent=LTnewLM_280006900 LTnewLM_28 AUGUSTUS CDS 55700 57475 0.99 + 0 ID=LTnewLM_280006900.1:CDS:1;Parent=LTnewLM_280006900.1 ### LTnewLM_28 . polypeptide 55700 57475 . + . ID=LTnewLM_280006900.1:pep;Derives_from=LTnewLM_280006900.1;orthologous_to=LmjF.28.0190_mRNA;ortholog_cluster=OG0003446;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 63026 64885 1 + . ID=LTnewLM_280007000 LTnewLM_28 AUGUSTUS mRNA 63026 64885 1 + . ID=LTnewLM_280007000.1;Parent=LTnewLM_280007000 LTnewLM_28 AUGUSTUS CDS 63026 64885 1 + 0 ID=LTnewLM_280007000.1:CDS:1;Parent=LTnewLM_280007000.1 ### LTnewLM_28 . polypeptide 63026 64885 . + . ID=LTnewLM_280007000.1:pep;Derives_from=LTnewLM_280007000.1;orthologous_to=LmjF.28.0200_mRNA;ortholog_cluster=OG0003447;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 67404 67832 1 + . ID=LTnewLM_280007100 LTnewLM_28 AUGUSTUS mRNA 67404 67832 1 + . ID=LTnewLM_280007100.1;Parent=LTnewLM_280007100 LTnewLM_28 AUGUSTUS CDS 67404 67832 1 + 0 ID=LTnewLM_280007100.1:CDS:1;Parent=LTnewLM_280007100.1 ### LTnewLM_28 . polypeptide 67404 67832 . + . ID=LTnewLM_280007100.1:pep;Derives_from=LTnewLM_280007100.1;orthologous_to=LmjF.28.0210_mRNA;ortholog_cluster=OG0003448;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_28 Pfam protein_match 67449 67724 . + . Parent=LTnewLM_280007100.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_28 AUGUSTUS gene 70944 72011 1 + . ID=LTnewLM_280007200 LTnewLM_28 AUGUSTUS mRNA 70944 72011 1 + . ID=LTnewLM_280007200.1;Parent=LTnewLM_280007200 LTnewLM_28 AUGUSTUS CDS 70944 72011 1 + 0 ID=LTnewLM_280007200.1:CDS:1;Parent=LTnewLM_280007200.1 ### LTnewLM_28 . polypeptide 70944 72011 . + . ID=LTnewLM_280007200.1:pep;Derives_from=LTnewLM_280007200.1;orthologous_to=LmjF.28.0220_mRNA;ortholog_cluster=OG0003449;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_28 Pfam protein_match 71427 71879 . + . Parent=LTnewLM_280007200.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_28 AUGUSTUS gene 73131 74165 1 + . ID=LTnewLM_280007300 LTnewLM_28 AUGUSTUS mRNA 73131 74165 1 + . ID=LTnewLM_280007300.1;Parent=LTnewLM_280007300 LTnewLM_28 AUGUSTUS CDS 73131 74165 1 + 0 ID=LTnewLM_280007300.1:CDS:1;Parent=LTnewLM_280007300.1 ### LTnewLM_28 . polypeptide 73131 74165 . + . ID=LTnewLM_280007300.1:pep;Derives_from=LTnewLM_280007300.1;orthologous_to=LmjF.28.0230_mRNA;ortholog_cluster=OG0003450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 76966 78792 1 + . ID=LTnewLM_280007400 LTnewLM_28 AUGUSTUS mRNA 76966 78792 1 + . ID=LTnewLM_280007400.1;Parent=LTnewLM_280007400 LTnewLM_28 AUGUSTUS CDS 76966 78792 1 + 0 ID=LTnewLM_280007400.1:CDS:1;Parent=LTnewLM_280007400.1 ### LTnewLM_28 . polypeptide 76966 78792 . + . ID=LTnewLM_280007400.1:pep;Derives_from=LTnewLM_280007400.1;orthologous_to=LmjF.28.0240_mRNA;ortholog_cluster=OG0003451;product=term%3DFAD dependent oxidoreductase/C-terminal domain of alpha-glycerophosphate oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01266|Pfam:PF16901;Ontology_term=GO:0055114,GO:0016491 LTnewLM_28 Pfam protein_match 77170 78291 . + . Parent=LTnewLM_280007400.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_28 Pfam protein_match 78376 78732 . + . Parent=LTnewLM_280007400.1:pep;Name=PF16901;signature_desc=C-terminal domain of alpha-glycerophosphate oxidase ### LTnewLM_28 AUGUSTUS gene 83106 83999 1 + . ID=LTnewLM_280007500 LTnewLM_28 AUGUSTUS mRNA 83106 83999 1 + . ID=LTnewLM_280007500.1;Parent=LTnewLM_280007500 LTnewLM_28 AUGUSTUS CDS 83106 83999 1 + 0 ID=LTnewLM_280007500.1:CDS:1;Parent=LTnewLM_280007500.1 ### LTnewLM_28 . polypeptide 83106 83999 . + . ID=LTnewLM_280007500.1:pep;Derives_from=LTnewLM_280007500.1;orthologous_to=LmjF.28.0250_mRNA;ortholog_cluster=OG0003452;product=term%3DNADH-ubiquinone oxidoreductase complex I%2C 21 kDa subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10785 LTnewLM_28 Pfam protein_match 83352 83591 . + . Parent=LTnewLM_280007500.1:pep;Name=PF10785;signature_desc=NADH-ubiquinone oxidoreductase complex I%2C 21 kDa subunit ### LTnewLM_28 AUGUSTUS gene 85362 88802 1 + . ID=LTnewLM_280007600 LTnewLM_28 AUGUSTUS mRNA 85362 88802 1 + . ID=LTnewLM_280007600.1;Parent=LTnewLM_280007600 LTnewLM_28 AUGUSTUS CDS 85362 88802 1 + 0 ID=LTnewLM_280007600.1:CDS:1;Parent=LTnewLM_280007600.1 ### LTnewLM_28 . polypeptide 85362 88802 . + . ID=LTnewLM_280007600.1:pep;Derives_from=LTnewLM_280007600.1;orthologous_to=LmjF.28.0260_mRNA;ortholog_cluster=OG0003453;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 90143 90892 1 + . ID=LTnewLM_280007700 LTnewLM_28 AUGUSTUS mRNA 90143 90892 1 + . ID=LTnewLM_280007700.1;Parent=LTnewLM_280007700 LTnewLM_28 AUGUSTUS CDS 90143 90892 1 + 0 ID=LTnewLM_280007700.1:CDS:1;Parent=LTnewLM_280007700.1 ### LTnewLM_28 . polypeptide 90143 90892 . + . ID=LTnewLM_280007700.1:pep;Derives_from=LTnewLM_280007700.1;orthologous_to=LmjF.28.0270_mRNA;ortholog_cluster=OG0003454;product=term%3DPhosphoadenosine phosphosulfate reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01507;Ontology_term=GO:0003824,GO:0008152 LTnewLM_28 Pfam protein_match 90329 90784 . + . Parent=LTnewLM_280007700.1:pep;Name=PF01507;signature_desc=Phosphoadenosine phosphosulfate reductase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_28 AUGUSTUS gene 92491 93159 1 + . ID=LTnewLM_280007800 LTnewLM_28 AUGUSTUS mRNA 92491 93159 1 + . ID=LTnewLM_280007800.1;Parent=LTnewLM_280007800 LTnewLM_28 AUGUSTUS CDS 92491 93159 1 + 0 ID=LTnewLM_280007800.1:CDS:1;Parent=LTnewLM_280007800.1 ### LTnewLM_28 . polypeptide 92491 93159 . + . ID=LTnewLM_280007800.1:pep;Derives_from=LTnewLM_280007800.1;orthologous_to=LmjF.28.0280_mRNA;ortholog_cluster=OG0003455;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 93806 94564 1 + . ID=LTnewLM_280007900 LTnewLM_28 AUGUSTUS mRNA 93806 94564 1 + . ID=LTnewLM_280007900.1;Parent=LTnewLM_280007900 LTnewLM_28 AUGUSTUS CDS 93806 94564 1 + 0 ID=LTnewLM_280007900.1:CDS:1;Parent=LTnewLM_280007900.1 ### LTnewLM_28 . polypeptide 93806 94564 . + . ID=LTnewLM_280007900.1:pep;Derives_from=LTnewLM_280007900.1;orthologous_to=LmjF.28.0290_mRNA;ortholog_cluster=OG0003456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 95441 97432 1 + . ID=LTnewLM_280008000 LTnewLM_28 AUGUSTUS mRNA 95441 97432 1 + . ID=LTnewLM_280008000.1;Parent=LTnewLM_280008000 LTnewLM_28 AUGUSTUS CDS 95441 97432 1 + 0 ID=LTnewLM_280008000.1:CDS:1;Parent=LTnewLM_280008000.1 ### LTnewLM_28 . polypeptide 95441 97432 . + . ID=LTnewLM_280008000.1:pep;Derives_from=LTnewLM_280008000.1;orthologous_to=LmjF.28.0300_mRNA;ortholog_cluster=OG0003457;product=term%3DHIT zinc finger/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04438|Pfam:PF00642;Ontology_term=GO:0046872 LTnewLM_28 Pfam protein_match 95852 95926 . + . Parent=LTnewLM_280008000.1:pep;Name=PF04438;signature_desc=HIT zinc finger LTnewLM_28 Pfam protein_match 97187 97249 . + . Parent=LTnewLM_280008000.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_28 AUGUSTUS gene 98588 99619 1 + . ID=LTnewLM_280008100 LTnewLM_28 AUGUSTUS mRNA 98588 99619 1 + . ID=LTnewLM_280008100.1;Parent=LTnewLM_280008100 LTnewLM_28 AUGUSTUS CDS 98588 99619 1 + 0 ID=LTnewLM_280008100.1:CDS:1;Parent=LTnewLM_280008100.1 ### LTnewLM_28 . polypeptide 98588 99619 . + . ID=LTnewLM_280008100.1:pep;Derives_from=LTnewLM_280008100.1;orthologous_to=LmjF.28.0310_mRNA;ortholog_cluster=OG0003458;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 100553 101581 1 + . ID=LTnewLM_280008200 LTnewLM_28 AUGUSTUS mRNA 100553 101581 1 + . ID=LTnewLM_280008200.1;Parent=LTnewLM_280008200 LTnewLM_28 AUGUSTUS CDS 100553 101581 1 + 0 ID=LTnewLM_280008200.1:CDS:1;Parent=LTnewLM_280008200.1 ### LTnewLM_28 . polypeptide 100553 101581 . + . ID=LTnewLM_280008200.1:pep;Derives_from=LTnewLM_280008200.1;orthologous_to=LmjF.28.0320_mRNA;ortholog_cluster=OG0003459;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 102638 105607 1 + . ID=LTnewLM_280008300 LTnewLM_28 AUGUSTUS mRNA 102638 105607 1 + . ID=LTnewLM_280008300.1;Parent=LTnewLM_280008300 LTnewLM_28 AUGUSTUS CDS 102638 105607 1 + 0 ID=LTnewLM_280008300.1:CDS:1;Parent=LTnewLM_280008300.1 ### LTnewLM_28 . polypeptide 102638 105607 . + . ID=LTnewLM_280008300.1:pep;Derives_from=LTnewLM_280008300.1;orthologous_to=LmjF.28.0330_mRNA;ortholog_cluster=OG0003460;product=term%3DPIN domain/Rrp44-like cold shock domain/Dis3-like cold-shock domain 2 (CSD2)/RNB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13638|Pfam:PF17216|Pfam:PF17849|Pfam:PF00773;Ontology_term=GO:0003723,GO:0004540 LTnewLM_28 Pfam protein_match 102815 103168 . + . Parent=LTnewLM_280008300.1:pep;Name=PF13638;signature_desc=PIN domain LTnewLM_28 Pfam protein_match 103355 103573 . + . Parent=LTnewLM_280008300.1:pep;Name=PF17216;signature_desc=Rrp44-like cold shock domain LTnewLM_28 Pfam protein_match 103745 103945 . + . Parent=LTnewLM_280008300.1:pep;Name=PF17849;signature_desc=Dis3-like cold-shock domain 2 (CSD2) LTnewLM_28 Pfam protein_match 104033 105025 . + . Parent=LTnewLM_280008300.1:pep;Name=PF00773;signature_desc=RNB domain;Ontology_term=GO:0003723,GO:0004540 ### LTnewLM_28 AUGUSTUS gene 106900 110361 1 + . ID=LTnewLM_280008400 LTnewLM_28 AUGUSTUS mRNA 106900 110361 1 + . ID=LTnewLM_280008400.1;Parent=LTnewLM_280008400 LTnewLM_28 AUGUSTUS CDS 106900 110361 1 + 0 ID=LTnewLM_280008400.1:CDS:1;Parent=LTnewLM_280008400.1 ### LTnewLM_28 . polypeptide 106900 110361 . + . ID=LTnewLM_280008400.1:pep;Derives_from=LTnewLM_280008400.1;orthologous_to=LmjF.28.0340_mRNA;ortholog_cluster=OG0003461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 111974 112702 1 + . ID=LTnewLM_280008500 LTnewLM_28 AUGUSTUS mRNA 111974 112702 1 + . ID=LTnewLM_280008500.1;Parent=LTnewLM_280008500 LTnewLM_28 AUGUSTUS CDS 111974 112702 1 + 0 ID=LTnewLM_280008500.1:CDS:1;Parent=LTnewLM_280008500.1 ### LTnewLM_28 . polypeptide 111974 112702 . + . ID=LTnewLM_280008500.1:pep;Derives_from=LTnewLM_280008500.1;orthologous_to=LmjF.28.0350_mRNA;ortholog_cluster=OG0003462;product=term%3DSugar efflux transporter for intercellular exchange%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03083 LTnewLM_28 Pfam protein_match 112001 112252 . + . Parent=LTnewLM_280008500.1:pep;Name=PF03083;signature_desc=Sugar efflux transporter for intercellular exchange LTnewLM_28 Pfam protein_match 112412 112645 . + . Parent=LTnewLM_280008500.1:pep;Name=PF03083;signature_desc=Sugar efflux transporter for intercellular exchange ### LTnewLM_28 AUGUSTUS gene 113332 114195 1 - . ID=LTnewLM_280008600 LTnewLM_28 AUGUSTUS mRNA 113332 114195 1 - . ID=LTnewLM_280008600.1;Parent=LTnewLM_280008600 LTnewLM_28 AUGUSTUS CDS 113332 114195 1 - 0 ID=LTnewLM_280008600.1:CDS:1;Parent=LTnewLM_280008600.1 ### LTnewLM_28 . polypeptide 113332 114195 . - . ID=LTnewLM_280008600.1:pep;Derives_from=LTnewLM_280008600.1;orthologous_to=LmjF.28.0360_mRNA;ortholog_cluster=OG0003463;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_28 Pfam protein_match 113881 114171 . - . Parent=LTnewLM_280008600.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_28 AUGUSTUS gene 115183 115797 0.95 - . ID=LTnewLM_280008700 LTnewLM_28 AUGUSTUS mRNA 115183 115797 0.95 - . ID=LTnewLM_280008700.1;Parent=LTnewLM_280008700 LTnewLM_28 AUGUSTUS CDS 115183 115797 0.95 - 0 ID=LTnewLM_280008700.1:CDS:1;Parent=LTnewLM_280008700.1 ### LTnewLM_28 . polypeptide 115183 115797 . - . ID=LTnewLM_280008700.1:pep;Derives_from=LTnewLM_280008700.1;orthologous_to=LmjF.28.0370_mRNA;ortholog_cluster=OG0003464;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 116461 117639 1 - . ID=LTnewLM_280008800 LTnewLM_28 AUGUSTUS mRNA 116461 117639 1 - . ID=LTnewLM_280008800.1;Parent=LTnewLM_280008800 LTnewLM_28 AUGUSTUS CDS 116461 117639 1 - 0 ID=LTnewLM_280008800.1:CDS:1;Parent=LTnewLM_280008800.1 ### LTnewLM_28 . polypeptide 116461 117639 . - . ID=LTnewLM_280008800.1:pep;Derives_from=LTnewLM_280008800.1;orthologous_to=LmjF.28.0380_mRNA;ortholog_cluster=OG0003465;product=term%3DSaccharopine dehydrogenase NADP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03435;Ontology_term=GO:0055114,GO:0016491 LTnewLM_28 Pfam protein_match 117247 117621 . - . Parent=LTnewLM_280008800.1:pep;Name=PF03435;signature_desc=Saccharopine dehydrogenase NADP binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 120277 123066 1 - . ID=LTnewLM_280008900 LTnewLM_28 AUGUSTUS mRNA 120277 123066 1 - . ID=LTnewLM_280008900.1;Parent=LTnewLM_280008900 LTnewLM_28 AUGUSTUS CDS 120277 123066 1 - 0 ID=LTnewLM_280008900.1:CDS:1;Parent=LTnewLM_280008900.1 ### LTnewLM_28 . polypeptide 120277 123066 . - . ID=LTnewLM_280008900.1:pep;Derives_from=LTnewLM_280008900.1;orthologous_to=LmjF.28.0390_mRNA;ortholog_cluster=OG0003466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 124186 125778 1 - . ID=LTnewLM_280009000 LTnewLM_28 AUGUSTUS mRNA 124186 125778 1 - . ID=LTnewLM_280009000.1;Parent=LTnewLM_280009000 LTnewLM_28 AUGUSTUS CDS 124186 125778 1 - 0 ID=LTnewLM_280009000.1:CDS:1;Parent=LTnewLM_280009000.1 ### LTnewLM_28 . polypeptide 124186 125778 . - . ID=LTnewLM_280009000.1:pep;Derives_from=LTnewLM_280009000.1;orthologous_to=LmjF.28.0400_mRNA;ortholog_cluster=OG0003467;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Vps4 C terminal oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862|Pfam:PF09336;Ontology_term=GO:0005524 LTnewLM_28 Pfam protein_match 124204 124350 . - . Parent=LTnewLM_280009000.1:pep;Name=PF09336;signature_desc=Vps4 C terminal oligomerisation domain LTnewLM_28 Pfam protein_match 124354 124476 . - . Parent=LTnewLM_280009000.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_28 Pfam protein_match 124543 124935 . - . Parent=LTnewLM_280009000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_28 AUGUSTUS gene 135245 137305 1 - . ID=LTnewLM_280009100 LTnewLM_28 AUGUSTUS mRNA 135245 137305 1 - . ID=LTnewLM_280009100.1;Parent=LTnewLM_280009100 LTnewLM_28 AUGUSTUS CDS 135245 137305 1 - 0 ID=LTnewLM_280009100.1:CDS:1;Parent=LTnewLM_280009100.1 ### LTnewLM_28 . polypeptide 135245 137305 . - . ID=LTnewLM_280009100.1:pep;Derives_from=LTnewLM_280009100.1;orthologous_to=LmjF.28.0410_mRNA;ortholog_cluster=OG0003468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 141183 142556 1 - . ID=LTnewLM_280009200 LTnewLM_28 AUGUSTUS mRNA 141183 142556 1 - . ID=LTnewLM_280009200.1;Parent=LTnewLM_280009200 LTnewLM_28 AUGUSTUS CDS 141183 142556 1 - 0 ID=LTnewLM_280009200.1:CDS:1;Parent=LTnewLM_280009200.1 ### LTnewLM_28 . polypeptide 141183 142556 . - . ID=LTnewLM_280009200.1:pep;Derives_from=LTnewLM_280009200.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 143432 144712 1 - . ID=LTnewLM_280009300 LTnewLM_28 AUGUSTUS mRNA 143432 144712 1 - . ID=LTnewLM_280009300.1;Parent=LTnewLM_280009300 LTnewLM_28 AUGUSTUS CDS 143432 144712 1 - 0 ID=LTnewLM_280009300.1:CDS:1;Parent=LTnewLM_280009300.1 ### LTnewLM_28 . polypeptide 143432 144712 . - . ID=LTnewLM_280009300.1:pep;Derives_from=LTnewLM_280009300.1;orthologous_to=LmjF.28.0430_mRNA;ortholog_cluster=OG0003469;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 145488 147812 1 - . ID=LTnewLM_280009400 LTnewLM_28 AUGUSTUS mRNA 145488 147812 1 - . ID=LTnewLM_280009400.1;Parent=LTnewLM_280009400 LTnewLM_28 AUGUSTUS CDS 145488 147812 1 - 0 ID=LTnewLM_280009400.1:CDS:1;Parent=LTnewLM_280009400.1 ### LTnewLM_28 . polypeptide 145488 147812 . - . ID=LTnewLM_280009400.1:pep;Derives_from=LTnewLM_280009400.1;orthologous_to=LmjF.28.0440_mRNA;ortholog_cluster=OG0003470;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 Liftoff gene 148433 151324 . - . ID=LTnewLM_280009500;coverage=1.0;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.0450_0 LTnewLM_28 Liftoff mRNA 148433 151324 . - . ID=LTnewLM_280009500.1;Parent=LTnewLM_280009500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 148433 151324 . - 0 ID=LTnewLM_280009500.1:CDS:1;Parent=LTnewLM_280009500.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 148433 151324 . - . ID=LTnewLM_280009500.1:pep;Derives_from=LTnewLM_280009500.1;orthologous_to=LmjF.28.0450_mRNA;ortholog_cluster=OG0003471;product=term%3DRNB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00773;Ontology_term=GO:0003723,GO:0004540 LTnewLM_28 Pfam protein_match 149267 150343 . - . Parent=LTnewLM_280009500.1:pep;Name=PF00773;signature_desc=RNB domain;Ontology_term=GO:0003723,GO:0004540 ### LTnewLM_28 AUGUSTUS gene 151991 152926 1 - . ID=LTnewLM_280009600 LTnewLM_28 AUGUSTUS mRNA 151991 152926 1 - . ID=LTnewLM_280009600.1;Parent=LTnewLM_280009600 LTnewLM_28 AUGUSTUS CDS 151991 152926 1 - 0 ID=LTnewLM_280009600.1:CDS:1;Parent=LTnewLM_280009600.1 ### LTnewLM_28 . polypeptide 151991 152926 . - . ID=LTnewLM_280009600.1:pep;Derives_from=LTnewLM_280009600.1;orthologous_to=LmjF.28.0460_mRNA;ortholog_cluster=OG0003472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 154306 156696 1 - . ID=LTnewLM_280009700 LTnewLM_28 AUGUSTUS mRNA 154306 156696 1 - . ID=LTnewLM_280009700.1;Parent=LTnewLM_280009700 LTnewLM_28 AUGUSTUS CDS 154306 156696 1 - 0 ID=LTnewLM_280009700.1:CDS:1;Parent=LTnewLM_280009700.1 ### LTnewLM_28 . polypeptide 154306 156696 . - . ID=LTnewLM_280009700.1:pep;Derives_from=LTnewLM_280009700.1;orthologous_to=LmjF.28.0470_mRNA;ortholog_cluster=OG0003473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 158344 160230 1 - . ID=LTnewLM_280009800 LTnewLM_28 AUGUSTUS mRNA 158344 160230 1 - . ID=LTnewLM_280009800.1;Parent=LTnewLM_280009800 LTnewLM_28 AUGUSTUS CDS 158344 160230 1 - 0 ID=LTnewLM_280009800.1:CDS:1;Parent=LTnewLM_280009800.1 ### LTnewLM_28 . polypeptide 158344 160230 . - . ID=LTnewLM_280009800.1:pep;Derives_from=LTnewLM_280009800.1;orthologous_to=LmjF.28.0480_mRNA;ortholog_cluster=OG0003474;product=term%3DEukaryotic-type carbonic anhydrase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00194 LTnewLM_28 Pfam protein_match 159301 160047 . - . Parent=LTnewLM_280009800.1:pep;Name=PF00194;signature_desc=Eukaryotic-type carbonic anhydrase ### LTnewLM_28 AUGUSTUS gene 161843 162526 1 - . ID=LTnewLM_280009900 LTnewLM_28 AUGUSTUS mRNA 161843 162526 1 - . ID=LTnewLM_280009900.1;Parent=LTnewLM_280009900 LTnewLM_28 AUGUSTUS CDS 161843 162526 1 - 0 ID=LTnewLM_280009900.1:CDS:1;Parent=LTnewLM_280009900.1 ### LTnewLM_28 . polypeptide 161843 162526 . - . ID=LTnewLM_280009900.1:pep;Derives_from=LTnewLM_280009900.1;orthologous_to=LmjF.28.0485_mRNA;ortholog_cluster=OG0003475;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 164547 166115 1 - . ID=LTnewLM_280010000 LTnewLM_28 AUGUSTUS mRNA 164547 166115 1 - . ID=LTnewLM_280010000.1;Parent=LTnewLM_280010000 LTnewLM_28 AUGUSTUS CDS 164547 166115 1 - 0 ID=LTnewLM_280010000.1:CDS:1;Parent=LTnewLM_280010000.1 ### LTnewLM_28 . polypeptide 164547 166115 . - . ID=LTnewLM_280010000.1:pep;Derives_from=LTnewLM_280010000.1;orthologous_to=LmjF.11.0590_mRNA,LmjF.28.0490_mRNA;ortholog_cluster=OG0000416;product=term%3DCarboxyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01039;Ontology_term=GO:0016874 LTnewLM_28 Pfam protein_match 164559 165995 . - . Parent=LTnewLM_280010000.1:pep;Name=PF01039;signature_desc=Carboxyl transferase domain;Ontology_term=GO:0016874 ### LTnewLM_28 AUGUSTUS gene 173970 176108 1 - . ID=LTnewLM_280010100 LTnewLM_28 AUGUSTUS mRNA 173970 176108 1 - . ID=LTnewLM_280010100.1;Parent=LTnewLM_280010100 LTnewLM_28 AUGUSTUS CDS 173970 176108 1 - 0 ID=LTnewLM_280010100.1:CDS:1;Parent=LTnewLM_280010100.1 ### LTnewLM_28 . polypeptide 173970 176108 . - . ID=LTnewLM_280010100.1:pep;Derives_from=LTnewLM_280010100.1;orthologous_to=LmjF.28.0500_mRNA;ortholog_cluster=OG0003476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 180192 181349 1 - . ID=LTnewLM_280010200 LTnewLM_28 AUGUSTUS mRNA 180192 181349 1 - . ID=LTnewLM_280010200.1;Parent=LTnewLM_280010200 LTnewLM_28 AUGUSTUS CDS 180192 181349 1 - 0 ID=LTnewLM_280010200.1:CDS:1;Parent=LTnewLM_280010200.1 ### LTnewLM_28 . polypeptide 180192 181349 . - . ID=LTnewLM_280010200.1:pep;Derives_from=LTnewLM_280010200.1;orthologous_to=LmjF.28.0510_mRNA;ortholog_cluster=OG0003477;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 182942 183847 1 - . ID=LTnewLM_280010300 LTnewLM_28 AUGUSTUS mRNA 182942 183847 1 - . ID=LTnewLM_280010300.1;Parent=LTnewLM_280010300 LTnewLM_28 AUGUSTUS CDS 182942 183847 1 - 0 ID=LTnewLM_280010300.1:CDS:1;Parent=LTnewLM_280010300.1 ### LTnewLM_28 . polypeptide 182942 183847 . - . ID=LTnewLM_280010300.1:pep;Derives_from=LTnewLM_280010300.1;orthologous_to=LmjF.28.0520_mRNA;ortholog_cluster=OG0003478;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 183008 183757 . - . Parent=LTnewLM_280010300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 183023 183754 . - . Parent=LTnewLM_280010300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_28 Pfam protein_match 183056 183442 . - . Parent=LTnewLM_280010300.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_28 AUGUSTUS gene 184868 188950 1 - . ID=LTnewLM_280010400 LTnewLM_28 AUGUSTUS mRNA 184868 188950 1 - . ID=LTnewLM_280010400.1;Parent=LTnewLM_280010400 LTnewLM_28 AUGUSTUS CDS 184868 188950 1 - 0 ID=LTnewLM_280010400.1:CDS:1;Parent=LTnewLM_280010400.1 ### LTnewLM_28 . polypeptide 184868 188950 . - . ID=LTnewLM_280010400.1:pep;Derives_from=LTnewLM_280010400.1;orthologous_to=LmjF.28.0530_mRNA;ortholog_cluster=OG0003479;product=term%3DAAA domain/SbcC/RAD50-like%2C Walker B motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13476|Pfam:PF13558 LTnewLM_28 Pfam protein_match 185051 185269 . - . Parent=LTnewLM_280010400.1:pep;Name=PF13558;signature_desc=SbcC/RAD50-like%2C Walker B motif LTnewLM_28 Pfam protein_match 188138 188935 . - . Parent=LTnewLM_280010400.1:pep;Name=PF13476;signature_desc=AAA domain ### LTnewLM_28 AUGUSTUS gene 189950 190288 1 - . ID=LTnewLM_280010500 LTnewLM_28 AUGUSTUS mRNA 189950 190288 1 - . ID=LTnewLM_280010500.1;Parent=LTnewLM_280010500 LTnewLM_28 AUGUSTUS CDS 189950 190288 1 - 0 ID=LTnewLM_280010500.1:CDS:1;Parent=LTnewLM_280010500.1 ### LTnewLM_28 . polypeptide 189950 190288 . - . ID=LTnewLM_280010500.1:pep;Derives_from=LTnewLM_280010500.1;orthologous_to=LTnewLM_300039600.1,LmjF.28.0540_mRNA;ortholog_cluster=OG0000417;product=term%3DRibosomal protein S26e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01283;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_28 Pfam protein_match 189983 190288 . - . Parent=LTnewLM_280010500.1:pep;Name=PF01283;signature_desc=Ribosomal protein S26e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_28 AUGUSTUS gene 191856 192986 1 - . ID=LTnewLM_280010600 LTnewLM_28 AUGUSTUS mRNA 191856 192986 1 - . ID=LTnewLM_280010600.1;Parent=LTnewLM_280010600 LTnewLM_28 AUGUSTUS CDS 191856 192986 1 - 0 ID=LTnewLM_280010600.1:CDS:1;Parent=LTnewLM_280010600.1 ### LTnewLM_28 . polypeptide 191856 192986 . - . ID=LTnewLM_280010600.1:pep;Derives_from=LTnewLM_280010600.1;orthologous_to=LmjF.28.0550_mRNA;ortholog_cluster=OG0003480;product=term%3DRad51/recA bacterial DNA recombination protein/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08423|Pfam:PF00154|Pfam:PF13481;Ontology_term=GO:0003697,GO:0006281,GO:0009432,GO:0005524 LTnewLM_28 Pfam protein_match 191871 192629 . - . Parent=LTnewLM_280010600.1:pep;Name=PF08423;signature_desc=Rad51 LTnewLM_28 Pfam protein_match 191964 192602 . - . Parent=LTnewLM_280010600.1:pep;Name=PF00154;signature_desc=recA bacterial DNA recombination protein;Ontology_term=GO:0003697,GO:0005524,GO:0006281,GO:0009432 LTnewLM_28 Pfam protein_match 192078 192563 . - . Parent=LTnewLM_280010600.1:pep;Name=PF13481;signature_desc=AAA domain ### LTnewLM_28 AUGUSTUS gene 200648 201508 1 - . ID=LTnewLM_280010700 LTnewLM_28 AUGUSTUS mRNA 200648 201508 1 - . ID=LTnewLM_280010700.1;Parent=LTnewLM_280010700 LTnewLM_28 AUGUSTUS CDS 200648 201508 1 - 0 ID=LTnewLM_280010700.1:CDS:1;Parent=LTnewLM_280010700.1 ### LTnewLM_28 . polypeptide 200648 201508 . - . ID=LTnewLM_280010700.1:pep;Derives_from=LTnewLM_280010700.1;orthologous_to=LmjF.28.0560_mRNA;ortholog_cluster=OG0003481;product=term%3DModifier of rudimentary (Mod(r)) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07200 LTnewLM_28 Pfam protein_match 200687 201106 . - . Parent=LTnewLM_280010700.1:pep;Name=PF07200;signature_desc=Modifier of rudimentary (Mod(r)) protein ### LTnewLM_28 AUGUSTUS gene 203651 205351 1 - . ID=LTnewLM_280010800 LTnewLM_28 AUGUSTUS mRNA 203651 205351 1 - . ID=LTnewLM_280010800.1;Parent=LTnewLM_280010800 LTnewLM_28 AUGUSTUS CDS 203651 205351 1 - 0 ID=LTnewLM_280010800.1:CDS:1;Parent=LTnewLM_280010800.1 ### LTnewLM_28 . polypeptide 203651 205351 . - . ID=LTnewLM_280010800.1:pep;Derives_from=LTnewLM_280010800.1;orthologous_to=LmjF.28.0570_mRNA;ortholog_cluster=OG0003482;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_28 Pfam protein_match 203768 205144 . - . Parent=LTnewLM_280010800.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_28 AUGUSTUS gene 207215 211936 1 - . ID=LTnewLM_280010900 LTnewLM_28 AUGUSTUS mRNA 207215 211936 1 - . ID=LTnewLM_280010900.1;Parent=LTnewLM_280010900 LTnewLM_28 AUGUSTUS CDS 207215 211936 1 - 0 ID=LTnewLM_280010900.1:CDS:1;Parent=LTnewLM_280010900.1 ### LTnewLM_28 . polypeptide 207215 211936 . - . ID=LTnewLM_280010900.1:pep;Derives_from=LTnewLM_280010900.1;orthologous_to=LmjF.28.0580_mRNA;ortholog_cluster=OG0003483;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 210773 211279 . - . Parent=LTnewLM_280010900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 211463 211708 . - . Parent=LTnewLM_280010900.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain LTnewLM_28 Pfam protein_match 211469 211927 . - . Parent=LTnewLM_280010900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 211484 211918 . - . Parent=LTnewLM_280010900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_28 AUGUSTUS gene 216267 217838 1 - . ID=LTnewLM_280011000 LTnewLM_28 AUGUSTUS mRNA 216267 217838 1 - . ID=LTnewLM_280011000.1;Parent=LTnewLM_280011000 LTnewLM_28 AUGUSTUS CDS 216267 217838 1 - 0 ID=LTnewLM_280011000.1:CDS:1;Parent=LTnewLM_280011000.1 ### LTnewLM_28 . polypeptide 216267 217838 . - . ID=LTnewLM_280011000.1:pep;Derives_from=LTnewLM_280011000.1;orthologous_to=LmjF.28.0590_mRNA;ortholog_cluster=OG0003484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 218722 219009 1 - . ID=LTnewLM_280011100 LTnewLM_28 AUGUSTUS mRNA 218722 219009 1 - . ID=LTnewLM_280011100.1;Parent=LTnewLM_280011100 LTnewLM_28 AUGUSTUS CDS 218722 219009 1 - 0 ID=LTnewLM_280011100.1:CDS:1;Parent=LTnewLM_280011100.1 ### LTnewLM_28 . polypeptide 218722 219009 . - . ID=LTnewLM_280011100.1:pep;Derives_from=LTnewLM_280011100.1;orthologous_to=LmjF.28.0600_mRNA;ortholog_cluster=OG0003485;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 220954 233769 1 - . ID=LTnewLM_280011200 LTnewLM_28 AUGUSTUS mRNA 220954 233769 1 - . ID=LTnewLM_280011200.1;Parent=LTnewLM_280011200 LTnewLM_28 AUGUSTUS CDS 220954 233769 1 - 0 ID=LTnewLM_280011200.1:CDS:1;Parent=LTnewLM_280011200.1 ### LTnewLM_28 . polypeptide 220954 233769 . - . ID=LTnewLM_280011200.1:pep;Derives_from=LTnewLM_280011200.1;orthologous_to=LmjF.28.0610_mRNA;ortholog_cluster=OG0003486;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0030286,GO:0007018,GO:0003777 LTnewLM_28 Pfam protein_match 220975 221880 . - . Parent=LTnewLM_280011200.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain LTnewLM_28 Pfam protein_match 221899 222312 . - . Parent=LTnewLM_280011200.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_28 Pfam protein_match 222409 222747 . - . Parent=LTnewLM_280011200.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_28 Pfam protein_match 223537 224199 . - . Parent=LTnewLM_280011200.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_28 Pfam protein_match 224284 225345 . - . Parent=LTnewLM_280011200.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_28 Pfam protein_match 225388 226176 . - . Parent=LTnewLM_280011200.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_28 Pfam protein_match 226375 226602 . - . Parent=LTnewLM_280011200.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_28 Pfam protein_match 226708 227247 . - . Parent=LTnewLM_280011200.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_28 Pfam protein_match 227383 227787 . - . Parent=LTnewLM_280011200.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_28 Pfam protein_match 228316 229293 . - . Parent=LTnewLM_280011200.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_28 Pfam protein_match 229681 230952 . - . Parent=LTnewLM_280011200.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 ### LTnewLM_28 AUGUSTUS gene 235270 239217 1 - . ID=LTnewLM_280011300 LTnewLM_28 AUGUSTUS mRNA 235270 239217 1 - . ID=LTnewLM_280011300.1;Parent=LTnewLM_280011300 LTnewLM_28 AUGUSTUS CDS 235270 239217 1 - 0 ID=LTnewLM_280011300.1:CDS:1;Parent=LTnewLM_280011300.1 ### LTnewLM_28 . polypeptide 235270 239217 . - . ID=LTnewLM_280011300.1:pep;Derives_from=LTnewLM_280011300.1;orthologous_to=LmjF.28.0620_mRNA;ortholog_cluster=OG0003487;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 238474 239208 . - . Parent=LTnewLM_280011300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 238483 239202 . - . Parent=LTnewLM_280011300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_28 AUGUSTUS gene 242319 242978 1 - . ID=LTnewLM_280011400 LTnewLM_28 AUGUSTUS mRNA 242319 242978 1 - . ID=LTnewLM_280011400.1;Parent=LTnewLM_280011400 LTnewLM_28 AUGUSTUS CDS 242319 242978 1 - 0 ID=LTnewLM_280011400.1:CDS:1;Parent=LTnewLM_280011400.1 ### LTnewLM_28 . polypeptide 242319 242978 . - . ID=LTnewLM_280011400.1:pep;Derives_from=LTnewLM_280011400.1;orthologous_to=LmjF.28.0630_mRNA;ortholog_cluster=OG0003488;product=term%3DER lumen protein retaining receptor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00810;Ontology_term=GO:0046923,GO:0006621,GO:0016021 LTnewLM_28 Pfam protein_match 242460 242897 . - . Parent=LTnewLM_280011400.1:pep;Name=PF00810;signature_desc=ER lumen protein retaining receptor;Ontology_term=GO:0046923,GO:0006621,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 244410 244616 1 - . ID=LTnewLM_280011500 LTnewLM_28 AUGUSTUS mRNA 244410 244616 1 - . ID=LTnewLM_280011500.1;Parent=LTnewLM_280011500 LTnewLM_28 AUGUSTUS CDS 244410 244616 1 - 0 ID=LTnewLM_280011500.1:CDS:1;Parent=LTnewLM_280011500.1 ### LTnewLM_28 . polypeptide 244410 244616 . - . ID=LTnewLM_280011500.1:pep;Derives_from=LTnewLM_280011500.1;orthologous_to=LmjF.28.0640_mRNA;ortholog_cluster=OG0003489;product=term%3DATP synthase subunit H%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05493;Ontology_term=GO:0033179,GO:0015991,GO:0015078 LTnewLM_28 Pfam protein_match 244428 244610 . - . Parent=LTnewLM_280011500.1:pep;Name=PF05493;signature_desc=ATP synthase subunit H;Ontology_term=GO:0015078,GO:0015991,GO:0033179 ### LTnewLM_28 AUGUSTUS gene 245798 246877 1 - . ID=LTnewLM_280011600 LTnewLM_28 AUGUSTUS mRNA 245798 246877 1 - . ID=LTnewLM_280011600.1;Parent=LTnewLM_280011600 LTnewLM_28 AUGUSTUS CDS 245798 246877 1 - 0 ID=LTnewLM_280011600.1:CDS:1;Parent=LTnewLM_280011600.1 ### LTnewLM_28 . polypeptide 245798 246877 . - . ID=LTnewLM_280011600.1:pep;Derives_from=LTnewLM_280011600.1;orthologous_to=LmjF.28.0650_mRNA;ortholog_cluster=OG0003490;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 246767 246856 . - . Parent=LTnewLM_280011600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 247986 249008 1 - . ID=LTnewLM_280011700 LTnewLM_28 AUGUSTUS mRNA 247986 249008 1 - . ID=LTnewLM_280011700.1;Parent=LTnewLM_280011700 LTnewLM_28 AUGUSTUS CDS 247986 249008 1 - 0 ID=LTnewLM_280011700.1:CDS:1;Parent=LTnewLM_280011700.1 ### LTnewLM_28 . polypeptide 247986 249008 . - . ID=LTnewLM_280011700.1:pep;Derives_from=LTnewLM_280011700.1;orthologous_to=LmjF.28.0660_mRNA;ortholog_cluster=OG0003491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 250901 252424 1 - . ID=LTnewLM_280011800 LTnewLM_28 AUGUSTUS mRNA 250901 252424 1 - . ID=LTnewLM_280011800.1;Parent=LTnewLM_280011800 LTnewLM_28 AUGUSTUS CDS 250901 252424 1 - 0 ID=LTnewLM_280011800.1:CDS:1;Parent=LTnewLM_280011800.1 ### LTnewLM_28 . polypeptide 250901 252424 . - . ID=LTnewLM_280011800.1:pep;Derives_from=LTnewLM_280011800.1;orthologous_to=LmjF.28.0670_mRNA;ortholog_cluster=OG0003492;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 253460 254245 1 - . ID=LTnewLM_280011900 LTnewLM_28 AUGUSTUS mRNA 253460 254245 1 - . ID=LTnewLM_280011900.1;Parent=LTnewLM_280011900 LTnewLM_28 AUGUSTUS CDS 253460 254245 1 - 0 ID=LTnewLM_280011900.1:CDS:1;Parent=LTnewLM_280011900.1 ### LTnewLM_28 . polypeptide 253460 254245 . - . ID=LTnewLM_280011900.1:pep;Derives_from=LTnewLM_280011900.1;orthologous_to=LmjF.28.0680_mRNA;ortholog_cluster=OG0003493;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637|Pfam:PF12796|Pfam:PF13857|Pfam:PF13606|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 253787 253933 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_28 Pfam protein_match 253823 253903 . - . Parent=LTnewLM_280011900.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 253835 253906 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 253835 254071 . - . Parent=LTnewLM_280011900.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_28 Pfam protein_match 253844 253969 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_28 Pfam protein_match 253895 254044 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_28 Pfam protein_match 253922 254002 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 253946 254098 . - . Parent=LTnewLM_280011900.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_28 AUGUSTUS gene 256595 257500 1 - . ID=LTnewLM_280012000 LTnewLM_28 AUGUSTUS mRNA 256595 257500 1 - . ID=LTnewLM_280012000.1;Parent=LTnewLM_280012000 LTnewLM_28 AUGUSTUS CDS 256595 257500 1 - 0 ID=LTnewLM_280012000.1:CDS:1;Parent=LTnewLM_280012000.1 ### LTnewLM_28 . polypeptide 256595 257500 . - . ID=LTnewLM_280012000.1:pep;Derives_from=LTnewLM_280012000.1;orthologous_to=LmjF.28.0690_mRNA;ortholog_cluster=OG0003494;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_28 Pfam protein_match 256772 257347 . - . Parent=LTnewLM_280012000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 LTnewLM_28 Pfam protein_match 257354 257494 . - . Parent=LTnewLM_280012000.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain ### LTnewLM_28 AUGUSTUS gene 259730 261157 1 - . ID=LTnewLM_280012100 LTnewLM_28 AUGUSTUS mRNA 259730 261157 1 - . ID=LTnewLM_280012100.1;Parent=LTnewLM_280012100 LTnewLM_28 AUGUSTUS CDS 259730 261157 1 - 0 ID=LTnewLM_280012100.1:CDS:1;Parent=LTnewLM_280012100.1 ### LTnewLM_28 . polypeptide 259730 261157 . - . ID=LTnewLM_280012100.1:pep;Derives_from=LTnewLM_280012100.1;orthologous_to=LmjF.28.0700_mRNA;ortholog_cluster=OG0003495;product=term%3DBTB/POZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02214;Ontology_term=GO:0051260 LTnewLM_28 Pfam protein_match 260774 261028 . - . Parent=LTnewLM_280012100.1:pep;Name=PF02214;signature_desc=BTB/POZ domain;Ontology_term=GO:0051260 ### LTnewLM_28 AUGUSTUS gene 262545 263297 1 - . ID=LTnewLM_280012200 LTnewLM_28 AUGUSTUS mRNA 262545 263297 1 - . ID=LTnewLM_280012200.1;Parent=LTnewLM_280012200 LTnewLM_28 AUGUSTUS CDS 262545 263297 1 - 0 ID=LTnewLM_280012200.1:CDS:1;Parent=LTnewLM_280012200.1 ### LTnewLM_28 . polypeptide 262545 263297 . - . ID=LTnewLM_280012200.1:pep;Derives_from=LTnewLM_280012200.1;orthologous_to=LmjF.28.0705_mRNA;ortholog_cluster=OG0003496;product=term%3DHomologous recombination OB-fold protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15072 LTnewLM_28 Pfam protein_match 262956 263204 . - . Parent=LTnewLM_280012200.1:pep;Name=PF15072;signature_desc=Homologous recombination OB-fold protein ### LTnewLM_28 AUGUSTUS gene 264484 266241 1 - . ID=LTnewLM_280012300 LTnewLM_28 AUGUSTUS mRNA 264484 266241 1 - . ID=LTnewLM_280012300.1;Parent=LTnewLM_280012300 LTnewLM_28 AUGUSTUS CDS 264484 266241 1 - 0 ID=LTnewLM_280012300.1:CDS:1;Parent=LTnewLM_280012300.1 ### LTnewLM_28 . polypeptide 264484 266241 . - . ID=LTnewLM_280012300.1:pep;Derives_from=LTnewLM_280012300.1;orthologous_to=LmjF.28.0710_mRNA;ortholog_cluster=OG0003497;product=term%3DSNARE associated Golgi protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09335 LTnewLM_28 Pfam protein_match 265183 265479 . - . Parent=LTnewLM_280012300.1:pep;Name=PF09335;signature_desc=SNARE associated Golgi protein ### LTnewLM_28 AUGUSTUS gene 267559 269241 1 - . ID=LTnewLM_280012400 LTnewLM_28 AUGUSTUS mRNA 267559 269241 1 - . ID=LTnewLM_280012400.1;Parent=LTnewLM_280012400 LTnewLM_28 AUGUSTUS CDS 267559 269241 1 - 0 ID=LTnewLM_280012400.1:CDS:1;Parent=LTnewLM_280012400.1 ### LTnewLM_28 . polypeptide 267559 269241 . - . ID=LTnewLM_280012400.1:pep;Derives_from=LTnewLM_280012400.1;orthologous_to=LmjF.28.0720_mRNA;ortholog_cluster=OG0003498;product=term%3DSas10/Utp3/C1D family/Sas10 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04000|Pfam:PF09368 LTnewLM_28 Pfam protein_match 267565 267780 . - . Parent=LTnewLM_280012400.1:pep;Name=PF09368;signature_desc=Sas10 C-terminal domain LTnewLM_28 Pfam protein_match 268498 268737 . - . Parent=LTnewLM_280012400.1:pep;Name=PF04000;signature_desc=Sas10/Utp3/C1D family ### LTnewLM_28 Liftoff gene 270370 270930 . - . ID=LTnewLM_280012500;coverage=1.0;sequence_ID=0.978;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.0730_0 LTnewLM_28 Liftoff mRNA 270370 270930 . - . ID=LTnewLM_280012500.1;Parent=LTnewLM_280012500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 270370 270930 . - 0 ID=LTnewLM_280012500.1:CDS:1;Parent=LTnewLM_280012500.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 270370 270930 . - . ID=LTnewLM_280012500.1:pep;Derives_from=LTnewLM_280012500.1;orthologous_to=LmjF.28.0730_mRNA;ortholog_cluster=OG0003499;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 272269 273570 . - . ID=LTnewLM_280012600.1:pep;Derives_from=LTnewLM_280012600.1;orthologous_to=LTnewLM_280012600.2,LmjF.28.0740.1_mRNA,LmjF.28.0740.2_mRNA;ortholog_cluster=OG0000289;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 272269 273675 . - . ID=LTnewLM_280012600.2:pep;Derives_from=LTnewLM_280012600.2;orthologous_to=LTnewLM_280012600.1,LmjF.28.0740.1_mRNA,LmjF.28.0740.2_mRNA;ortholog_cluster=OG0000289;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 272269 273718 . - . ID=LTnewLM_280012600:pseudogene;coverage=0.981;sequence_ID=0.933;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.0740_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 272269 273660 . - . ID=LTnewLM_280012600.1;Parent=LTnewLM_280012600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 272269 273570 . - . ID=LTnewLM_280012600.1:pseudogenic_exon:1;Parent=LTnewLM_280012600.1;extra_copy_number=0 LTnewLM_28 . pseudogenic_transcript 272269 273718 . - . ID=LTnewLM_280012600.2;Parent=LTnewLM_280012600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 272269 273675 . - . ID=LTnewLM_280012600.2:pseudogenic_exon:1;Parent=LTnewLM_280012600.2;extra_copy_number=0 ### LTnewLM_28 AUGUSTUS gene 275414 276082 1 - . ID=LTnewLM_280012700 LTnewLM_28 AUGUSTUS mRNA 275414 276082 1 - . ID=LTnewLM_280012700.1;Parent=LTnewLM_280012700 LTnewLM_28 AUGUSTUS CDS 275414 276082 1 - 0 ID=LTnewLM_280012700.1:CDS:1;Parent=LTnewLM_280012700.1 ### LTnewLM_28 . polypeptide 275414 276082 . - . ID=LTnewLM_280012700.1:pep;Derives_from=LTnewLM_280012700.1;orthologous_to=LmjF.28.0750_mRNA;ortholog_cluster=OG0003500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 277675 280041 1 - . ID=LTnewLM_280012800 LTnewLM_28 AUGUSTUS mRNA 277675 280041 1 - . ID=LTnewLM_280012800.1;Parent=LTnewLM_280012800 LTnewLM_28 AUGUSTUS CDS 277675 280041 1 - 0 ID=LTnewLM_280012800.1:CDS:1;Parent=LTnewLM_280012800.1 ### LTnewLM_28 . polypeptide 277675 280041 . - . ID=LTnewLM_280012800.1:pep;Derives_from=LTnewLM_280012800.1;orthologous_to=LmjF.28.0760_mRNA;ortholog_cluster=OG0003501;product=term%3DSNF2-related domain/Type III restriction enzyme%2C res subunit/RING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger)/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF04851|Pfam:PF13445|Pfam:PF00097|Pfam:PF00271;Ontology_term=GO:0046872,GO:0005524,GO:0016787,GO:0003677 LTnewLM_28 Pfam protein_match 278032 278361 . - . Parent=LTnewLM_280012800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_28 Pfam protein_match 278476 278613 . - . Parent=LTnewLM_280012800.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_28 Pfam protein_match 278506 278613 . - . Parent=LTnewLM_280012800.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_28 Pfam protein_match 278650 279864 . - . Parent=LTnewLM_280012800.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_28 Pfam protein_match 279028 279420 . - . Parent=LTnewLM_280012800.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_28 AUGUSTUS gene 280596 282035 0.98 - . ID=LTnewLM_280012900 LTnewLM_28 AUGUSTUS mRNA 280596 282035 0.98 - . ID=LTnewLM_280012900.1;Parent=LTnewLM_280012900 LTnewLM_28 AUGUSTUS CDS 280596 282035 0.98 - 0 ID=LTnewLM_280012900.1:CDS:1;Parent=LTnewLM_280012900.1 ### LTnewLM_28 . polypeptide 280596 282035 . - . ID=LTnewLM_280012900.1:pep;Derives_from=LTnewLM_280012900.1;orthologous_to=LmjF.28.0770_mRNA;ortholog_cluster=OG0003502;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 283055 283671 . + . ID=LTnewLM_280013000:pseudogene;coverage=0.988;sequence_ID=0.900;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.0785_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 283055 283671 . + . ID=LTnewLM_280013000.1;Parent=LTnewLM_280013000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 283055 283671 . + . ID=LTnewLM_280013000.1:pseudogenic_exon:1;Parent=LTnewLM_280013000.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 283055 283671 . + . ID=LTnewLM_280013000.1:pep;Derives_from=LTnewLM_280013000.1;product=term%3Dhypothetical protein ### LTnewLM_28 Liftoff gene 284032 285606 . + . ID=LTnewLM_280013100;coverage=1.0;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.0780_0 LTnewLM_28 Liftoff mRNA 284032 285606 . + . ID=LTnewLM_280013100.1;Parent=LTnewLM_280013100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 284032 285606 . + 0 ID=LTnewLM_280013100.1:CDS:1;Parent=LTnewLM_280013100.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 284032 285606 . + . ID=LTnewLM_280013100.1:pep;Derives_from=LTnewLM_280013100.1;orthologous_to=LmjF.28.0780_mRNA;ortholog_cluster=OG0003503;product=term%3DCid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03828 LTnewLM_28 Pfam protein_match 285061 285243 . + . Parent=LTnewLM_280013100.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase ### LTnewLM_28 AUGUSTUS gene 286046 287935 1 + . ID=LTnewLM_280013200 LTnewLM_28 AUGUSTUS mRNA 286046 287935 1 + . ID=LTnewLM_280013200.1;Parent=LTnewLM_280013200 LTnewLM_28 AUGUSTUS CDS 286046 287935 1 + 0 ID=LTnewLM_280013200.1:CDS:1;Parent=LTnewLM_280013200.1 ### LTnewLM_28 . polypeptide 286046 287935 . + . ID=LTnewLM_280013200.1:pep;Derives_from=LTnewLM_280013200.1;orthologous_to=LmjF.28.0790_mRNA;ortholog_cluster=OG0003504;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_28 Pfam protein_match 286547 286711 . + . Parent=LTnewLM_280013200.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_28 AUGUSTUS gene 288595 289059 1 + . ID=LTnewLM_280013300 LTnewLM_28 AUGUSTUS mRNA 288595 289059 1 + . ID=LTnewLM_280013300.1;Parent=LTnewLM_280013300 LTnewLM_28 AUGUSTUS CDS 288595 289059 1 + 0 ID=LTnewLM_280013300.1:CDS:1;Parent=LTnewLM_280013300.1 ### LTnewLM_28 . polypeptide 288595 289059 . + . ID=LTnewLM_280013300.1:pep;Derives_from=LTnewLM_280013300.1;orthologous_to=LmjF.28.0800_mRNA;ortholog_cluster=OG0003505;product=term%3DEF-hand domain/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14658|Pfam:PF13833|Pfam:PF13405;Ontology_term=GO:0005509 LTnewLM_28 Pfam protein_match 288640 288822 . + . Parent=LTnewLM_280013300.1:pep;Name=PF14658;signature_desc=EF-hand domain LTnewLM_28 Pfam protein_match 288772 288897 . + . Parent=LTnewLM_280013300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_28 Pfam protein_match 288847 288933 . + . Parent=LTnewLM_280013300.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 ### LTnewLM_28 AUGUSTUS gene 290024 290473 1 + . ID=LTnewLM_280013400 LTnewLM_28 AUGUSTUS mRNA 290024 290473 1 + . ID=LTnewLM_280013400.1;Parent=LTnewLM_280013400 LTnewLM_28 AUGUSTUS CDS 290024 290473 1 + 0 ID=LTnewLM_280013400.1:CDS:1;Parent=LTnewLM_280013400.1 ### LTnewLM_28 . polypeptide 290024 290473 . + . ID=LTnewLM_280013400.1:pep;Derives_from=LTnewLM_280013400.1;orthologous_to=LmjF.28.0810_mRNA;ortholog_cluster=OG0003506;product=term%3DRNA polymerase Rpb8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03870;Ontology_term=GO:0006351 LTnewLM_28 Pfam protein_match 290048 290458 . + . Parent=LTnewLM_280013400.1:pep;Name=PF03870;signature_desc=RNA polymerase Rpb8;Ontology_term=GO:0006351 ### LTnewLM_28 . pseudogene 291285 292796 2.69e+03 + . ID=LTnewLM_280013500:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.28.0820:mRNA 2 505;original_prot_length=505 LTnewLM_28 . pseudogenic_transcript 291285 292796 . + . ID=LTnewLM_280013500.1;Parent=LTnewLM_280013500:pseudogene LTnewLM_28 . pseudogenic_exon 291285 292796 . + . ID=LTnewLM_280013500.1:pseudogenic_exon:1;Parent=LTnewLM_280013500.1 ### LTnewLM_28 . polypeptide 291285 292796 . + . ID=LTnewLM_280013500.1:pep;Derives_from=LTnewLM_280013500.1;orthologous_to=LmjF.28.0820_mRNA;ortholog_cluster=OG0007567;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 293872 294630 1 + . ID=LTnewLM_280013600 LTnewLM_28 AUGUSTUS mRNA 293872 294630 1 + . ID=LTnewLM_280013600.1;Parent=LTnewLM_280013600 LTnewLM_28 AUGUSTUS CDS 293872 294630 1 + 0 ID=LTnewLM_280013600.1:CDS:1;Parent=LTnewLM_280013600.1 ### LTnewLM_28 . polypeptide 293872 294630 . + . ID=LTnewLM_280013600.1:pep;Derives_from=LTnewLM_280013600.1;orthologous_to=LmjF.28.0822_mRNA;ortholog_cluster=OG0003507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 295854 296285 1 + . ID=LTnewLM_280013700 LTnewLM_28 AUGUSTUS mRNA 295854 296285 1 + . ID=LTnewLM_280013700.1;Parent=LTnewLM_280013700 LTnewLM_28 AUGUSTUS CDS 295854 296285 1 + 0 ID=LTnewLM_280013700.1:CDS:1;Parent=LTnewLM_280013700.1 ### LTnewLM_28 . polypeptide 295854 296285 . + . ID=LTnewLM_280013700.1:pep;Derives_from=LTnewLM_280013700.1;orthologous_to=LmjF.28.0825_mRNA;ortholog_cluster=OG0003508;product=term%3D'Cold-shock' DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00313;Ontology_term=GO:0006355,GO:0003677 LTnewLM_28 Pfam protein_match 295917 296102 . + . Parent=LTnewLM_280013700.1:pep;Name=PF00313;signature_desc='Cold-shock' DNA-binding domain;Ontology_term=GO:0003677,GO:0006355 ### LTnewLM_28 AUGUSTUS gene 299608 301206 1 + . ID=LTnewLM_280013800 LTnewLM_28 AUGUSTUS mRNA 299608 301206 1 + . ID=LTnewLM_280013800.1;Parent=LTnewLM_280013800 LTnewLM_28 AUGUSTUS CDS 299608 301206 1 + 0 ID=LTnewLM_280013800.1:CDS:1;Parent=LTnewLM_280013800.1 ### LTnewLM_28 . polypeptide 299608 301206 . + . ID=LTnewLM_280013800.1:pep;Derives_from=LTnewLM_280013800.1;orthologous_to=LmjF.28.0830_mRNA;ortholog_cluster=OG0003509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 306621 307151 1 + . ID=LTnewLM_280013900 LTnewLM_28 AUGUSTUS mRNA 306621 307151 1 + . ID=LTnewLM_280013900.1;Parent=LTnewLM_280013900 LTnewLM_28 AUGUSTUS CDS 306621 307151 1 + 0 ID=LTnewLM_280013900.1:CDS:1;Parent=LTnewLM_280013900.1 ### LTnewLM_28 . polypeptide 306621 307151 . + . ID=LTnewLM_280013900.1:pep;Derives_from=LTnewLM_280013900.1;orthologous_to=LmjF.28.0835_mRNA;ortholog_cluster=OG0003510;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 307851 310463 1 + . ID=LTnewLM_280014000 LTnewLM_28 AUGUSTUS mRNA 307851 310463 1 + . ID=LTnewLM_280014000.1;Parent=LTnewLM_280014000 LTnewLM_28 AUGUSTUS CDS 307851 310463 1 + 0 ID=LTnewLM_280014000.1:CDS:1;Parent=LTnewLM_280014000.1 ### LTnewLM_28 . polypeptide 307851 310463 . + . ID=LTnewLM_280014000.1:pep;Derives_from=LTnewLM_280014000.1;orthologous_to=LmjF.28.0840_mRNA;ortholog_cluster=OG0003511;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_28 Pfam protein_match 308043 308291 . + . Parent=LTnewLM_280014000.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_28 AUGUSTUS gene 312039 314957 1 + . ID=LTnewLM_280014100 LTnewLM_28 AUGUSTUS mRNA 312039 314957 1 + . ID=LTnewLM_280014100.1;Parent=LTnewLM_280014100 LTnewLM_28 AUGUSTUS CDS 312039 314957 1 + 0 ID=LTnewLM_280014100.1:CDS:1;Parent=LTnewLM_280014100.1 ### LTnewLM_28 . polypeptide 312039 314957 . + . ID=LTnewLM_280014100.1:pep;Derives_from=LTnewLM_280014100.1;orthologous_to=LmjF.28.0850_mRNA;ortholog_cluster=OG0003512;product=term%3DMini-chromosome maintenance protein 2/MCM N-terminal domain/MCM OB domain/MCM P-loop domain/AAA domain (dynein-related subfamily)/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12619|Pfam:PF14551|Pfam:PF17207|Pfam:PF00493|Pfam:PF07728|Pfam:PF01078|Pfam:PF17855;Ontology_term=GO:0003678,GO:0015995,GO:0006260,GO:0015979,GO:0006270,GO:0016851,GO:0005524,GO:0016887,GO:0005634,GO:0042555,GO:0003677 LTnewLM_28 Pfam protein_match 312135 312467 . + . Parent=LTnewLM_280014100.1:pep;Name=PF12619;signature_desc=Mini-chromosome maintenance protein 2;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0006270,GO:0005634,GO:0042555 LTnewLM_28 Pfam protein_match 312699 312953 . + . Parent=LTnewLM_280014100.1:pep;Name=PF14551;signature_desc=MCM N-terminal domain LTnewLM_28 Pfam protein_match 312990 313367 . + . Parent=LTnewLM_280014100.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_28 Pfam protein_match 313491 314162 . + . Parent=LTnewLM_280014100.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_28 Pfam protein_match 313668 314015 . + . Parent=LTnewLM_280014100.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_28 Pfam protein_match 313812 314096 . + . Parent=LTnewLM_280014100.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_28 Pfam protein_match 314382 314624 . + . Parent=LTnewLM_280014100.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_28 AUGUSTUS gene 315627 317141 0.82 + . ID=LTnewLM_280014200 LTnewLM_28 AUGUSTUS mRNA 315627 317141 0.82 + . ID=LTnewLM_280014200.1;Parent=LTnewLM_280014200 LTnewLM_28 AUGUSTUS CDS 315627 317141 0.82 + 0 ID=LTnewLM_280014200.1:CDS:1;Parent=LTnewLM_280014200.1 ### LTnewLM_28 . polypeptide 315627 317141 . + . ID=LTnewLM_280014200.1:pep;Derives_from=LTnewLM_280014200.1;orthologous_to=LmjF.28.0860_mRNA;ortholog_cluster=OG0003513;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 318162 319898 1 + . ID=LTnewLM_280014300 LTnewLM_28 AUGUSTUS mRNA 318162 319898 1 + . ID=LTnewLM_280014300.1;Parent=LTnewLM_280014300 LTnewLM_28 AUGUSTUS CDS 318162 319898 1 + 0 ID=LTnewLM_280014300.1:CDS:1;Parent=LTnewLM_280014300.1 ### LTnewLM_28 . polypeptide 318162 319898 . + . ID=LTnewLM_280014300.1:pep;Derives_from=LTnewLM_280014300.1;orthologous_to=LmjF.28.0870_mRNA;ortholog_cluster=OG0003514;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 321454 321984 1 + . ID=LTnewLM_280014400 LTnewLM_28 AUGUSTUS mRNA 321454 321984 1 + . ID=LTnewLM_280014400.1;Parent=LTnewLM_280014400 LTnewLM_28 AUGUSTUS CDS 321454 321984 1 + 0 ID=LTnewLM_280014400.1:CDS:1;Parent=LTnewLM_280014400.1 ### LTnewLM_28 . polypeptide 321454 321984 . + . ID=LTnewLM_280014400.1:pep;Derives_from=LTnewLM_280014400.1;orthologous_to=LmjF.28.0880_mRNA;ortholog_cluster=OG0003515;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 323523 325922 1 + . ID=LTnewLM_280014500 LTnewLM_28 AUGUSTUS mRNA 323523 325922 1 + . ID=LTnewLM_280014500.1;Parent=LTnewLM_280014500 LTnewLM_28 AUGUSTUS CDS 323523 325922 1 + 0 ID=LTnewLM_280014500.1:CDS:1;Parent=LTnewLM_280014500.1 ### LTnewLM_28 . polypeptide 323523 325922 . + . ID=LTnewLM_280014500.1:pep;Derives_from=LTnewLM_280014500.1;orthologous_to=LmjF.28.0890_mRNA;ortholog_cluster=OG0003516;product=term%3DATP cone domain/Ribonucleotide reductase%2C all-alpha domain/Ribonucleotide reductase%2C barrel domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03477|Pfam:PF00317|Pfam:PF02867;Ontology_term=GO:0055114,GO:0006260,GO:0005524,GO:0004748 LTnewLM_28 Pfam protein_match 323541 323798 . + . Parent=LTnewLM_280014500.1:pep;Name=PF03477;signature_desc=ATP cone domain LTnewLM_28 Pfam protein_match 323961 324185 . + . Parent=LTnewLM_280014500.1:pep;Name=PF00317;signature_desc=Ribonucleotide reductase%2C all-alpha domain;Ontology_term=GO:0004748,GO:0005524,GO:0006260,GO:0055114 LTnewLM_28 Pfam protein_match 324198 325772 . + . Parent=LTnewLM_280014500.1:pep;Name=PF02867;signature_desc=Ribonucleotide reductase%2C barrel domain;Ontology_term=GO:0006260,GO:0055114 ### LTnewLM_28 Liftoff gene 326591 328728 . + . ID=LTnewLM_280014600;coverage=0.991;sequence_ID=0.912;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.0900_0 LTnewLM_28 Liftoff mRNA 326591 328728 . + . ID=LTnewLM_280014600.1;Parent=LTnewLM_280014600;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff five_prime_UTR 326591 327786 . + . ID=LTnewLM_280014600:five_prime_UTR;Parent=LTnewLM_280014600.1;extra_copy_number=0 LTnewLM_28 Liftoff CDS 327787 328728 . + 0 ID=LTnewLM_280014600.1:CDS:1;Parent=LTnewLM_280014600.1;extra_copy_number=0 LTnewLM_28 Liftoff mRNA 327828 328728 . + . ID=LTnewLM_280014600.2;Parent=LTnewLM_280014600;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff five_prime_UTR 327828 327854 . + . ID=LTnewLM_280014600:five_prime_UTR.1;Parent=LTnewLM_280014600.2;extra_copy_number=0 LTnewLM_28 Liftoff CDS 327856 328728 . + 0 ID=LTnewLM_280014600.2:CDS:1;Parent=LTnewLM_280014600.2;extra_copy_number=0 ### LTnewLM_28 . polypeptide 327787 328728 . + . ID=LTnewLM_280014600.1:pep;Derives_from=LTnewLM_280014600.1;orthologous_to=LTnewLM_280014600.2,LmjF.28.0900.1_mRNA,LmjF.28.0900.2_mRNA;ortholog_cluster=OG0000197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 327856 328728 . + . ID=LTnewLM_280014600.2:pep;Derives_from=LTnewLM_280014600.2;orthologous_to=LTnewLM_280014600.1,LmjF.28.0900.1_mRNA,LmjF.28.0900.2_mRNA;ortholog_cluster=OG0000197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 331022 335437 1 + . ID=LTnewLM_280014700 LTnewLM_28 AUGUSTUS mRNA 331022 335437 1 + . ID=LTnewLM_280014700.1;Parent=LTnewLM_280014700 LTnewLM_28 AUGUSTUS CDS 331022 335437 1 + 0 ID=LTnewLM_280014700.1:CDS:1;Parent=LTnewLM_280014700.1 ### LTnewLM_28 . polypeptide 331022 335437 . + . ID=LTnewLM_280014700.1:pep;Derives_from=LTnewLM_280014700.1;orthologous_to=LmjF.28.0910_mRNA;ortholog_cluster=OG0003517;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 340835 341404 1 + . ID=LTnewLM_280014800 LTnewLM_28 AUGUSTUS mRNA 340835 341404 1 + . ID=LTnewLM_280014800.1;Parent=LTnewLM_280014800 LTnewLM_28 AUGUSTUS CDS 340835 341404 1 + 0 ID=LTnewLM_280014800.1:CDS:1;Parent=LTnewLM_280014800.1 ### LTnewLM_28 . polypeptide 340835 341404 . + . ID=LTnewLM_280014800.1:pep;Derives_from=LTnewLM_280014800.1;orthologous_to=LmjF.28.0920_mRNA;ortholog_cluster=OG0003518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 342589 343824 1 + . ID=LTnewLM_280014900 LTnewLM_28 AUGUSTUS mRNA 342589 343824 1 + . ID=LTnewLM_280014900.1;Parent=LTnewLM_280014900 LTnewLM_28 AUGUSTUS CDS 342589 343824 1 + 0 ID=LTnewLM_280014900.1:CDS:1;Parent=LTnewLM_280014900.1 ### LTnewLM_28 . polypeptide 342589 343824 . + . ID=LTnewLM_280014900.1:pep;Derives_from=LTnewLM_280014900.1;orthologous_to=LmjF.28.0930_mRNA;ortholog_cluster=OG0003519;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 345575 348496 1 + . ID=LTnewLM_280015000 LTnewLM_28 AUGUSTUS mRNA 345575 348496 1 + . ID=LTnewLM_280015000.1;Parent=LTnewLM_280015000 LTnewLM_28 AUGUSTUS CDS 345575 348496 1 + 0 ID=LTnewLM_280015000.1:CDS:1;Parent=LTnewLM_280015000.1 ### LTnewLM_28 . polypeptide 345575 348496 . + . ID=LTnewLM_280015000.1:pep;Derives_from=LTnewLM_280015000.1;orthologous_to=LmjF.28.0940_mRNA;ortholog_cluster=OG0003520;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_28 Pfam protein_match 347354 347626 . + . Parent=LTnewLM_280015000.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_28 Pfam protein_match 348032 348349 . + . Parent=LTnewLM_280015000.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_28 AUGUSTUS gene 349487 349867 1 + . ID=LTnewLM_280015100 LTnewLM_28 AUGUSTUS mRNA 349487 349867 1 + . ID=LTnewLM_280015100.1;Parent=LTnewLM_280015100 LTnewLM_28 AUGUSTUS CDS 349487 349867 1 + 0 ID=LTnewLM_280015100.1:CDS:1;Parent=LTnewLM_280015100.1 ### LTnewLM_28 . polypeptide 349487 349867 . + . ID=LTnewLM_280015100.1:pep;Derives_from=LTnewLM_280015100.1;orthologous_to=LmjF.28.0950_mRNA;ortholog_cluster=OG0003521;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_28 Pfam protein_match 349565 349846 . + . Parent=LTnewLM_280015100.1:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_28 AUGUSTUS gene 350885 351319 1 + . ID=LTnewLM_280015200 LTnewLM_28 AUGUSTUS mRNA 350885 351319 1 + . ID=LTnewLM_280015200.1;Parent=LTnewLM_280015200 LTnewLM_28 AUGUSTUS CDS 350885 351319 1 + 0 ID=LTnewLM_280015200.1:CDS:1;Parent=LTnewLM_280015200.1 ### LTnewLM_28 . polypeptide 350885 351319 . + . ID=LTnewLM_280015200.1:pep;Derives_from=LTnewLM_280015200.1;orthologous_to=LmjF.28.0960_mRNA;ortholog_cluster=OG0003522;product=term%3DRibosomal protein S11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00411;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_28 Pfam protein_match 350948 351301 . + . Parent=LTnewLM_280015200.1:pep;Name=PF00411;signature_desc=Ribosomal protein S11;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_28 AUGUSTUS gene 352642 353139 1 + . ID=LTnewLM_280015300 LTnewLM_28 AUGUSTUS mRNA 352642 353139 1 + . ID=LTnewLM_280015300.1;Parent=LTnewLM_280015300 LTnewLM_28 AUGUSTUS CDS 352642 353139 1 + 0 ID=LTnewLM_280015300.1:CDS:1;Parent=LTnewLM_280015300.1 ### LTnewLM_28 . polypeptide 352642 353139 . + . ID=LTnewLM_280015300.1:pep;Derives_from=LTnewLM_280015300.1;orthologous_to=LmjF.28.0970_mRNA;ortholog_cluster=OG0003523;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 353930 354652 1 + . ID=LTnewLM_280015400 LTnewLM_28 AUGUSTUS mRNA 353930 354652 1 + . ID=LTnewLM_280015400.1;Parent=LTnewLM_280015400 LTnewLM_28 AUGUSTUS CDS 353930 354652 1 + 0 ID=LTnewLM_280015400.1:CDS:1;Parent=LTnewLM_280015400.1 ### LTnewLM_28 . polypeptide 353930 354652 . + . ID=LTnewLM_280015400.1:pep;Derives_from=LTnewLM_280015400.1;orthologous_to=LmjF.28.0980_mRNA;ortholog_cluster=OG0003524;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 357612 358058 1 + . ID=LTnewLM_280015500 LTnewLM_28 AUGUSTUS mRNA 357612 358058 1 + . ID=LTnewLM_280015500.1;Parent=LTnewLM_280015500 LTnewLM_28 AUGUSTUS CDS 357612 358058 1 + 0 ID=LTnewLM_280015500.1:CDS:1;Parent=LTnewLM_280015500.1 ### LTnewLM_28 . polypeptide 357612 358058 . + . ID=LTnewLM_280015500.1:pep;Derives_from=LTnewLM_280015500.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 359079 359624 1 + . ID=LTnewLM_280015600 LTnewLM_28 AUGUSTUS mRNA 359079 359624 1 + . ID=LTnewLM_280015600.1;Parent=LTnewLM_280015600 LTnewLM_28 AUGUSTUS CDS 359079 359624 1 + 0 ID=LTnewLM_280015600.1:CDS:1;Parent=LTnewLM_280015600.1 ### LTnewLM_28 . polypeptide 359079 359624 . + . ID=LTnewLM_280015600.1:pep;Derives_from=LTnewLM_280015600.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 360721 361971 1 + . ID=LTnewLM_280015700 LTnewLM_28 AUGUSTUS mRNA 360721 361971 1 + . ID=LTnewLM_280015700.1;Parent=LTnewLM_280015700 LTnewLM_28 AUGUSTUS CDS 360721 361971 1 + 0 ID=LTnewLM_280015700.1:CDS:1;Parent=LTnewLM_280015700.1 ### LTnewLM_28 . polypeptide 360721 361971 . + . ID=LTnewLM_280015700.1:pep;Derives_from=LTnewLM_280015700.1;orthologous_to=LmjF.28.0990_mRNA;ortholog_cluster=OG0003525;product=term%3DSerine incorporator (Serinc)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03348;Ontology_term=GO:0016020 LTnewLM_28 Pfam protein_match 360805 361680 . + . Parent=LTnewLM_280015700.1:pep;Name=PF03348;signature_desc=Serine incorporator (Serinc);Ontology_term=GO:0016020 LTnewLM_28 Pfam protein_match 361687 361920 . + . Parent=LTnewLM_280015700.1:pep;Name=PF03348;signature_desc=Serine incorporator (Serinc);Ontology_term=GO:0016020 ### LTnewLM_28 Liftoff gene 365691 368873 . + . ID=LTnewLM_280015800;coverage=1.0;sequence_ID=0.947;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.1000_0 LTnewLM_28 Liftoff mRNA 365691 368873 . + . ID=LTnewLM_280015800.1;Parent=LTnewLM_280015800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 365691 368873 . + 0 ID=LTnewLM_280015800.1:CDS:1;Parent=LTnewLM_280015800.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 365691 368873 . + . ID=LTnewLM_280015800.1:pep;Derives_from=LTnewLM_280015800.1;orthologous_to=LmjF.28.1000_mRNA;ortholog_cluster=OG0003526;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 369990 370340 1 + . ID=LTnewLM_280015900 LTnewLM_28 AUGUSTUS mRNA 369990 370340 1 + . ID=LTnewLM_280015900.1;Parent=LTnewLM_280015900 LTnewLM_28 AUGUSTUS CDS 369990 370340 1 + 0 ID=LTnewLM_280015900.1:CDS:1;Parent=LTnewLM_280015900.1 ### LTnewLM_28 . polypeptide 369990 370340 . + . ID=LTnewLM_280015900.1:pep;Derives_from=LTnewLM_280015900.1;orthologous_to=LTnewLM_280016100.1,LmjF.28.1010_mRNA,LmjF.28.1030_mRNA;ortholog_cluster=OG0000198;product=term%3DRibosomal protein S10p/S20e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00338 LTnewLM_28 Pfam protein_match 370041 370322 . + . Parent=LTnewLM_280015900.1:pep;Name=PF00338;signature_desc=Ribosomal protein S10p/S20e ### LTnewLM_28 AUGUSTUS gene 371541 373424 1 + . ID=LTnewLM_280016000 LTnewLM_28 AUGUSTUS mRNA 371541 373424 1 + . ID=LTnewLM_280016000.1;Parent=LTnewLM_280016000 LTnewLM_28 AUGUSTUS CDS 371541 373424 1 + 0 ID=LTnewLM_280016000.1:CDS:1;Parent=LTnewLM_280016000.1 ### LTnewLM_28 . polypeptide 371541 373424 . + . ID=LTnewLM_280016000.1:pep;Derives_from=LTnewLM_280016000.1;orthologous_to=LmjF.28.1020_mRNA;ortholog_cluster=OG0003527;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 374530 374880 1 + . ID=LTnewLM_280016100 LTnewLM_28 AUGUSTUS mRNA 374530 374880 1 + . ID=LTnewLM_280016100.1;Parent=LTnewLM_280016100 LTnewLM_28 AUGUSTUS CDS 374530 374880 1 + 0 ID=LTnewLM_280016100.1:CDS:1;Parent=LTnewLM_280016100.1 ### LTnewLM_28 . polypeptide 374530 374880 . + . ID=LTnewLM_280016100.1:pep;Derives_from=LTnewLM_280016100.1;orthologous_to=LTnewLM_280015900.1,LmjF.28.1010_mRNA,LmjF.28.1030_mRNA;ortholog_cluster=OG0000198;product=term%3DRibosomal protein S10p/S20e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00338 LTnewLM_28 Pfam protein_match 374581 374862 . + . Parent=LTnewLM_280016100.1:pep;Name=PF00338;signature_desc=Ribosomal protein S10p/S20e ### LTnewLM_28 AUGUSTUS gene 375858 378392 1 + . ID=LTnewLM_280016200 LTnewLM_28 AUGUSTUS mRNA 375858 378392 1 + . ID=LTnewLM_280016200.1;Parent=LTnewLM_280016200 LTnewLM_28 AUGUSTUS CDS 375858 378392 1 + 0 ID=LTnewLM_280016200.1:CDS:1;Parent=LTnewLM_280016200.1 ### LTnewLM_28 . polypeptide 375858 378392 . + . ID=LTnewLM_280016200.1:pep;Derives_from=LTnewLM_280016200.1;orthologous_to=LmjF.28.1040_mRNA;ortholog_cluster=OG0003528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 379436 381466 0.94 + . ID=LTnewLM_280016300 LTnewLM_28 AUGUSTUS mRNA 379436 381466 0.94 + . ID=LTnewLM_280016300.1;Parent=LTnewLM_280016300 LTnewLM_28 AUGUSTUS CDS 379436 381466 0.94 + 0 ID=LTnewLM_280016300.1:CDS:1;Parent=LTnewLM_280016300.1 ### LTnewLM_28 . polypeptide 379436 381466 . + . ID=LTnewLM_280016300.1:pep;Derives_from=LTnewLM_280016300.1;orthologous_to=LmjF.28.1050_mRNA;ortholog_cluster=OG0003529;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 382688 382966 0.6 + . ID=LTnewLM_280016400 LTnewLM_28 AUGUSTUS mRNA 382688 382966 0.6 + . ID=LTnewLM_280016400.1;Parent=LTnewLM_280016400 LTnewLM_28 AUGUSTUS CDS 382688 382966 0.6 + 0 ID=LTnewLM_280016400.1:CDS:1;Parent=LTnewLM_280016400.1 ### LTnewLM_28 . polypeptide 382688 382966 . + . ID=LTnewLM_280016400.1:pep;Derives_from=LTnewLM_280016400.1;orthologous_to=LTnewLM_240009600.1;ortholog_cluster=OG0002587;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 386696 387913 1 + . ID=LTnewLM_280016500 LTnewLM_28 AUGUSTUS mRNA 386696 387913 1 + . ID=LTnewLM_280016500.1;Parent=LTnewLM_280016500 LTnewLM_28 AUGUSTUS CDS 386696 387913 1 + 0 ID=LTnewLM_280016500.1:CDS:1;Parent=LTnewLM_280016500.1 ### LTnewLM_28 . polypeptide 386696 387913 . + . ID=LTnewLM_280016500.1:pep;Derives_from=LTnewLM_280016500.1;orthologous_to=LmjF.28.1060_mRNA;ortholog_cluster=OG0003530;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 390263 394906 1 + . ID=LTnewLM_280016600 LTnewLM_28 AUGUSTUS mRNA 390263 394906 1 + . ID=LTnewLM_280016600.1;Parent=LTnewLM_280016600 LTnewLM_28 AUGUSTUS CDS 390263 394906 1 + 0 ID=LTnewLM_280016600.1:CDS:1;Parent=LTnewLM_280016600.1 ### LTnewLM_28 . polypeptide 390263 394906 . + . ID=LTnewLM_280016600.1:pep;Derives_from=LTnewLM_280016600.1;orthologous_to=LmjF.28.1070_mRNA;ortholog_cluster=OG0003531;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 396712 398880 1 + . ID=LTnewLM_280016700 LTnewLM_28 AUGUSTUS mRNA 396712 398880 1 + . ID=LTnewLM_280016700.1;Parent=LTnewLM_280016700 LTnewLM_28 AUGUSTUS CDS 396712 398880 1 + 0 ID=LTnewLM_280016700.1:CDS:1;Parent=LTnewLM_280016700.1 ### LTnewLM_28 . polypeptide 396712 398880 . + . ID=LTnewLM_280016700.1:pep;Derives_from=LTnewLM_280016700.1;orthologous_to=LmjF.28.1080_mRNA;ortholog_cluster=OG0003532;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 401820 404468 . + . ID=LTnewLM_280016800:pseudogene;coverage=1.0;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1090_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 401820 404468 . + . ID=LTnewLM_280016800.1;Parent=LTnewLM_280016800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 401820 404468 . + . ID=LTnewLM_280016800.1:pseudogenic_exon:1;Parent=LTnewLM_280016800.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 401820 404468 . + . ID=LTnewLM_280016800.1:pep;Derives_from=LTnewLM_280016800.1;orthologous_to=LmjF.28.1090_mRNA;ortholog_cluster=OG0007568;product=term%3DATP-grasp domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13535 LTnewLM_28 Pfam protein_match 402948 403184 . + . Parent=LTnewLM_280016800.1:pep;Name=PF13535;signature_desc=ATP-grasp domain ### LTnewLM_28 AUGUSTUS gene 406782 407426 1 + . ID=LTnewLM_280016900 LTnewLM_28 AUGUSTUS mRNA 406782 407426 1 + . ID=LTnewLM_280016900.1;Parent=LTnewLM_280016900 LTnewLM_28 AUGUSTUS CDS 406782 407426 1 + 0 ID=LTnewLM_280016900.1:CDS:1;Parent=LTnewLM_280016900.1 ### LTnewLM_28 . polypeptide 406782 407426 . + . ID=LTnewLM_280016900.1:pep;Derives_from=LTnewLM_280016900.1;orthologous_to=LmjF.28.1095_mRNA;ortholog_cluster=OG0003533;product=term%3DShikimate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01202 LTnewLM_28 Pfam protein_match 406821 406964 . + . Parent=LTnewLM_280016900.1:pep;Name=PF01202;signature_desc=Shikimate kinase ### LTnewLM_28 AUGUSTUS gene 409285 411840 1 + . ID=LTnewLM_280017000 LTnewLM_28 AUGUSTUS mRNA 409285 411840 1 + . ID=LTnewLM_280017000.1;Parent=LTnewLM_280017000 LTnewLM_28 AUGUSTUS CDS 409285 411840 1 + 0 ID=LTnewLM_280017000.1:CDS:1;Parent=LTnewLM_280017000.1 ### LTnewLM_28 . polypeptide 409285 411840 . + . ID=LTnewLM_280017000.1:pep;Derives_from=LTnewLM_280017000.1;orthologous_to=LmjF.28.1100_mRNA;ortholog_cluster=OG0003534;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 412955 414844 1 + . ID=LTnewLM_280017100 LTnewLM_28 AUGUSTUS mRNA 412955 414844 1 + . ID=LTnewLM_280017100.1;Parent=LTnewLM_280017100 LTnewLM_28 AUGUSTUS CDS 412955 414844 1 + 0 ID=LTnewLM_280017100.1:CDS:1;Parent=LTnewLM_280017100.1 ### LTnewLM_28 . polypeptide 412955 414844 . + . ID=LTnewLM_280017100.1:pep;Derives_from=LTnewLM_280017100.1;orthologous_to=LmjF.28.1110_mRNA;ortholog_cluster=OG0003535;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 413282 413365 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 414062 414124 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 414203 414298 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 414335 414433 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 414611 414685 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 414698 414811 . + . Parent=LTnewLM_280017100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 417679 418443 1 + . ID=LTnewLM_280017200 LTnewLM_28 AUGUSTUS mRNA 417679 418443 1 + . ID=LTnewLM_280017200.1;Parent=LTnewLM_280017200 LTnewLM_28 AUGUSTUS CDS 417679 418443 1 + 0 ID=LTnewLM_280017200.1:CDS:1;Parent=LTnewLM_280017200.1 ### LTnewLM_28 . polypeptide 417679 418443 . + . ID=LTnewLM_280017200.1:pep;Derives_from=LTnewLM_280017200.1;orthologous_to=LmjF.28.1120_mRNA;ortholog_cluster=OG0003536;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 421466 423025 1 + . ID=LTnewLM_280017300 LTnewLM_28 AUGUSTUS mRNA 421466 423025 1 + . ID=LTnewLM_280017300.1;Parent=LTnewLM_280017300 LTnewLM_28 AUGUSTUS CDS 421466 423025 1 + 0 ID=LTnewLM_280017300.1:CDS:1;Parent=LTnewLM_280017300.1 ### LTnewLM_28 . polypeptide 421466 423025 . + . ID=LTnewLM_280017300.1:pep;Derives_from=LTnewLM_280017300.1;orthologous_to=LmjF.28.1130_mRNA;ortholog_cluster=OG0003537;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_28 Pfam protein_match 421943 422392 . + . Parent=LTnewLM_280017300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein LTnewLM_28 Pfam protein_match 422483 422992 . + . Parent=LTnewLM_280017300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_28 AUGUSTUS gene 428726 429703 1 + . ID=LTnewLM_280017400 LTnewLM_28 AUGUSTUS mRNA 428726 429703 1 + . ID=LTnewLM_280017400.1;Parent=LTnewLM_280017400 LTnewLM_28 AUGUSTUS CDS 428726 429703 1 + 0 ID=LTnewLM_280017400.1:CDS:1;Parent=LTnewLM_280017400.1 ### LTnewLM_28 . polypeptide 428726 429703 . + . ID=LTnewLM_280017400.1:pep;Derives_from=LTnewLM_280017400.1;orthologous_to=LmjF.28.1140_mRNA;ortholog_cluster=OG0003538;product=term%3DElectron transfer flavoprotein domain/Electron transfer flavoprotein FAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01012|Pfam:PF00766 LTnewLM_28 Pfam protein_match 428762 429262 . + . Parent=LTnewLM_280017400.1:pep;Name=PF01012;signature_desc=Electron transfer flavoprotein domain LTnewLM_28 Pfam protein_match 429323 429562 . + . Parent=LTnewLM_280017400.1:pep;Name=PF00766;signature_desc=Electron transfer flavoprotein FAD-binding domain ### LTnewLM_28 AUGUSTUS gene 432356 434581 1 + . ID=LTnewLM_280017500 LTnewLM_28 AUGUSTUS mRNA 432356 434581 1 + . ID=LTnewLM_280017500.1;Parent=LTnewLM_280017500 LTnewLM_28 AUGUSTUS CDS 432356 434581 1 + 0 ID=LTnewLM_280017500.1:CDS:1;Parent=LTnewLM_280017500.1 ### LTnewLM_28 . polypeptide 432356 434581 . + . ID=LTnewLM_280017500.1:pep;Derives_from=LTnewLM_280017500.1;orthologous_to=LmjF.28.1150_mRNA;ortholog_cluster=OG0003539;product=term%3DAMP-binding enzyme/AMP-binding enzyme C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501|Pfam:PF13193;Ontology_term=GO:0003824,GO:0008152 LTnewLM_28 Pfam protein_match 433295 434224 . + . Parent=LTnewLM_280017500.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_28 Pfam protein_match 434258 434536 . + . Parent=LTnewLM_280017500.1:pep;Name=PF13193;signature_desc=AMP-binding enzyme C-terminal domain ### LTnewLM_28 AUGUSTUS gene 436341 436811 1 + . ID=LTnewLM_280017600 LTnewLM_28 AUGUSTUS mRNA 436341 436811 1 + . ID=LTnewLM_280017600.1;Parent=LTnewLM_280017600 LTnewLM_28 AUGUSTUS CDS 436341 436811 1 + 0 ID=LTnewLM_280017600.1:CDS:1;Parent=LTnewLM_280017600.1 ### LTnewLM_28 . polypeptide 436341 436811 . + . ID=LTnewLM_280017600.1:pep;Derives_from=LTnewLM_280017600.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 438236 438841 1 + . ID=LTnewLM_280017700 LTnewLM_28 AUGUSTUS mRNA 438236 438841 1 + . ID=LTnewLM_280017700.1;Parent=LTnewLM_280017700 LTnewLM_28 AUGUSTUS CDS 438236 438841 1 + 0 ID=LTnewLM_280017700.1:CDS:1;Parent=LTnewLM_280017700.1 ### LTnewLM_28 . polypeptide 438236 438841 . + . ID=LTnewLM_280017700.1:pep;Derives_from=LTnewLM_280017700.1;orthologous_to=LmjF.28.1160_mRNA;ortholog_cluster=OG0003540;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_28 Pfam protein_match 438380 438556 . + . Parent=LTnewLM_280017700.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 LTnewLM_28 Pfam protein_match 438617 438793 . + . Parent=LTnewLM_280017700.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_28 AUGUSTUS gene 440650 443562 1 + . ID=LTnewLM_280017800 LTnewLM_28 AUGUSTUS mRNA 440650 443562 1 + . ID=LTnewLM_280017800.1;Parent=LTnewLM_280017800 LTnewLM_28 AUGUSTUS CDS 440650 443562 1 + 0 ID=LTnewLM_280017800.1:CDS:1;Parent=LTnewLM_280017800.1 ### LTnewLM_28 . polypeptide 440650 443562 . + . ID=LTnewLM_280017800.1:pep;Derives_from=LTnewLM_280017800.1;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_28 Pfam protein_match 441868 441924 . + . Parent=LTnewLM_280017800.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_28 AUGUSTUS gene 444267 444569 1 + . ID=LTnewLM_280017900 LTnewLM_28 AUGUSTUS mRNA 444267 444569 1 + . ID=LTnewLM_280017900.1;Parent=LTnewLM_280017900 LTnewLM_28 AUGUSTUS CDS 444267 444569 1 + 0 ID=LTnewLM_280017900.1:CDS:1;Parent=LTnewLM_280017900.1 ### LTnewLM_28 . polypeptide 444267 444569 . + . ID=LTnewLM_280017900.1:pep;Derives_from=LTnewLM_280017900.1;orthologous_to=LmjF.28.1170_mRNA;ortholog_cluster=OG0003541;product=term%3DAN1-like Zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01428;Ontology_term=GO:0008270 LTnewLM_28 Pfam protein_match 444279 444392 . + . Parent=LTnewLM_280017900.1:pep;Name=PF01428;signature_desc=AN1-like Zinc finger;Ontology_term=GO:0008270 ### LTnewLM_28 AUGUSTUS gene 445376 446056 1 + . ID=LTnewLM_280018000 LTnewLM_28 AUGUSTUS mRNA 445376 446056 1 + . ID=LTnewLM_280018000.1;Parent=LTnewLM_280018000 LTnewLM_28 AUGUSTUS CDS 445376 446056 1 + 0 ID=LTnewLM_280018000.1:CDS:1;Parent=LTnewLM_280018000.1 ### LTnewLM_28 . polypeptide 445376 446056 . + . ID=LTnewLM_280018000.1:pep;Derives_from=LTnewLM_280018000.1;orthologous_to=LmjF.28.1180_mRNA;ortholog_cluster=OG0003542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 448478 450004 1 + . ID=LTnewLM_280018100 LTnewLM_28 AUGUSTUS mRNA 448478 450004 1 + . ID=LTnewLM_280018100.1;Parent=LTnewLM_280018100 LTnewLM_28 AUGUSTUS CDS 448478 450004 1 + 0 ID=LTnewLM_280018100.1:CDS:1;Parent=LTnewLM_280018100.1 ### LTnewLM_28 . polypeptide 448478 450004 . + . ID=LTnewLM_280018100.1:pep;Derives_from=LTnewLM_280018100.1;orthologous_to=LmjF.28.1190_mRNA;ortholog_cluster=OG0003543;product=term%3DC2 domain/Copine%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168|Pfam:PF07002;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 448511 448798 . + . Parent=LTnewLM_280018100.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 448883 449146 . + . Parent=LTnewLM_280018100.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 449357 449980 . + . Parent=LTnewLM_280018100.1:pep;Name=PF07002;signature_desc=Copine ### LTnewLM_28 AUGUSTUS gene 451297 453273 1 + . ID=LTnewLM_280018200 LTnewLM_28 AUGUSTUS mRNA 451297 453273 1 + . ID=LTnewLM_280018200.1;Parent=LTnewLM_280018200 LTnewLM_28 AUGUSTUS CDS 451297 453273 1 + 0 ID=LTnewLM_280018200.1:CDS:1;Parent=LTnewLM_280018200.1 ### LTnewLM_28 . polypeptide 451297 453273 . + . ID=LTnewLM_280018200.1:pep;Derives_from=LTnewLM_280018200.1;orthologous_to=LmjF.28.1200_mRNA;ortholog_cluster=OG0003544;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 451408 453219 . + . Parent=LTnewLM_280018200.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 451753 452505 . + . Parent=LTnewLM_280018200.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 458181 460538 1 + . ID=LTnewLM_280018300 LTnewLM_28 AUGUSTUS mRNA 458181 460538 1 + . ID=LTnewLM_280018300.1;Parent=LTnewLM_280018300 LTnewLM_28 AUGUSTUS CDS 458181 460538 1 + 0 ID=LTnewLM_280018300.1:CDS:1;Parent=LTnewLM_280018300.1 ### LTnewLM_28 . polypeptide 458181 460538 . + . ID=LTnewLM_280018300.1:pep;Derives_from=LTnewLM_280018300.1;orthologous_to=LmjF.28.1210_mRNA;ortholog_cluster=OG0003545;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 461266 462669 1 + . ID=LTnewLM_280018400 LTnewLM_28 AUGUSTUS mRNA 461266 462669 1 + . ID=LTnewLM_280018400.1;Parent=LTnewLM_280018400 LTnewLM_28 AUGUSTUS CDS 461266 462669 1 + 0 ID=LTnewLM_280018400.1:CDS:1;Parent=LTnewLM_280018400.1 ### LTnewLM_28 . polypeptide 461266 462669 . + . ID=LTnewLM_280018400.1:pep;Derives_from=LTnewLM_280018400.1;orthologous_to=LmjF.28.1220_mRNA;ortholog_cluster=OG0003546;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 463809 465050 1 + . ID=LTnewLM_280018500 LTnewLM_28 AUGUSTUS mRNA 463809 465050 1 + . ID=LTnewLM_280018500.1;Parent=LTnewLM_280018500 LTnewLM_28 AUGUSTUS CDS 463809 465050 1 + 0 ID=LTnewLM_280018500.1:CDS:1;Parent=LTnewLM_280018500.1 ### LTnewLM_28 . polypeptide 463809 465050 . + . ID=LTnewLM_280018500.1:pep;Derives_from=LTnewLM_280018500.1;orthologous_to=LmjF.28.1230_mRNA;ortholog_cluster=OG0003547;product=term%3DSMP-30/Gluconolactonase/LRE-like region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08450 LTnewLM_28 Pfam protein_match 463875 464894 . + . Parent=LTnewLM_280018500.1:pep;Name=PF08450;signature_desc=SMP-30/Gluconolactonase/LRE-like region ### LTnewLM_28 AUGUSTUS gene 466668 468605 1 + . ID=LTnewLM_280018600 LTnewLM_28 AUGUSTUS mRNA 466668 468605 1 + . ID=LTnewLM_280018600.1;Parent=LTnewLM_280018600 LTnewLM_28 AUGUSTUS CDS 466668 468605 1 + 0 ID=LTnewLM_280018600.1:CDS:1;Parent=LTnewLM_280018600.1 ### LTnewLM_28 . polypeptide 466668 468605 . + . ID=LTnewLM_280018600.1:pep;Derives_from=LTnewLM_280018600.1;orthologous_to=LmjF.28.1240_mRNA;ortholog_cluster=OG0003548;product=term%3DFlavodoxin/FAD binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00258|Pfam:PF00667|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_28 Pfam protein_match 466866 467276 . + . Parent=LTnewLM_280018600.1:pep;Name=PF00258;signature_desc=Flavodoxin;Ontology_term=GO:0010181,GO:0016491 LTnewLM_28 Pfam protein_match 467445 468032 . + . Parent=LTnewLM_280018600.1:pep;Name=PF00667;signature_desc=FAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_28 Pfam protein_match 468150 468479 . + . Parent=LTnewLM_280018600.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 470054 471370 1 + . ID=LTnewLM_280018700 LTnewLM_28 AUGUSTUS mRNA 470054 471370 1 + . ID=LTnewLM_280018700.1;Parent=LTnewLM_280018700 LTnewLM_28 AUGUSTUS CDS 470054 471370 1 + 0 ID=LTnewLM_280018700.1:CDS:1;Parent=LTnewLM_280018700.1 ### LTnewLM_28 . polypeptide 470054 471370 . + . ID=LTnewLM_280018700.1:pep;Derives_from=LTnewLM_280018700.1;orthologous_to=LmjF.28.1250_mRNA;ortholog_cluster=OG0003549;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 472438 475893 1 + . ID=LTnewLM_280018800 LTnewLM_28 AUGUSTUS mRNA 472438 475893 1 + . ID=LTnewLM_280018800.1;Parent=LTnewLM_280018800 LTnewLM_28 AUGUSTUS CDS 472438 475893 1 + 0 ID=LTnewLM_280018800.1:CDS:1;Parent=LTnewLM_280018800.1 ### LTnewLM_28 . polypeptide 472438 475893 . + . ID=LTnewLM_280018800.1:pep;Derives_from=LTnewLM_280018800.1;orthologous_to=LmjF.28.1260_mRNA;ortholog_cluster=OG0003550;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 477036 478448 1 + . ID=LTnewLM_280018900 LTnewLM_28 AUGUSTUS mRNA 477036 478448 1 + . ID=LTnewLM_280018900.1;Parent=LTnewLM_280018900 LTnewLM_28 AUGUSTUS CDS 477036 478448 1 + 0 ID=LTnewLM_280018900.1:CDS:1;Parent=LTnewLM_280018900.1 ### LTnewLM_28 . polypeptide 477036 478448 . + . ID=LTnewLM_280018900.1:pep;Derives_from=LTnewLM_280018900.1;orthologous_to=LmjF.28.1270_mRNA;ortholog_cluster=OG0003551;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_28 Pfam protein_match 477063 477263 . + . Parent=LTnewLM_280018900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_28 AUGUSTUS gene 479068 480426 1 + . ID=LTnewLM_280019000 LTnewLM_28 AUGUSTUS mRNA 479068 480426 1 + . ID=LTnewLM_280019000.1;Parent=LTnewLM_280019000 LTnewLM_28 AUGUSTUS CDS 479068 480426 1 + 0 ID=LTnewLM_280019000.1:CDS:1;Parent=LTnewLM_280019000.1 ### LTnewLM_28 . polypeptide 479068 480426 . + . ID=LTnewLM_280019000.1:pep;Derives_from=LTnewLM_280019000.1;orthologous_to=LmjF.28.1280_mRNA;ortholog_cluster=OG0003552;product=term%3DBiopterin-dependent aromatic amino acid hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00351;Ontology_term=GO:0055114,GO:0016714 LTnewLM_28 Pfam protein_match 479437 480369 . + . Parent=LTnewLM_280019000.1:pep;Name=PF00351;signature_desc=Biopterin-dependent aromatic amino acid hydroxylase;Ontology_term=GO:0016714,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 483170 484489 1 + . ID=LTnewLM_280019100 LTnewLM_28 AUGUSTUS mRNA 483170 484489 1 + . ID=LTnewLM_280019100.1;Parent=LTnewLM_280019100 LTnewLM_28 AUGUSTUS CDS 483170 484489 1 + 0 ID=LTnewLM_280019100.1:CDS:1;Parent=LTnewLM_280019100.1 ### LTnewLM_28 . polypeptide 483170 484489 . + . ID=LTnewLM_280019100.1:pep;Derives_from=LTnewLM_280019100.1;orthologous_to=LmjF.28.1290_mRNA;ortholog_cluster=OG0003553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 485080 486276 1 + . ID=LTnewLM_280019200 LTnewLM_28 AUGUSTUS mRNA 485080 486276 1 + . ID=LTnewLM_280019200.1;Parent=LTnewLM_280019200 LTnewLM_28 AUGUSTUS CDS 485080 486276 1 + 0 ID=LTnewLM_280019200.1:CDS:1;Parent=LTnewLM_280019200.1 ### LTnewLM_28 . polypeptide 485080 486276 . + . ID=LTnewLM_280019200.1:pep;Derives_from=LTnewLM_280019200.1;orthologous_to=LmjF.28.1300_mRNA;ortholog_cluster=OG0003554;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00097;Ontology_term=GO:0046872 LTnewLM_28 Pfam protein_match 485887 486006 . + . Parent=LTnewLM_280019200.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_28 AUGUSTUS gene 487241 489952 1 + . ID=LTnewLM_280019300 LTnewLM_28 AUGUSTUS mRNA 487241 489952 1 + . ID=LTnewLM_280019300.1;Parent=LTnewLM_280019300 LTnewLM_28 AUGUSTUS CDS 487241 489952 1 + 0 ID=LTnewLM_280019300.1:CDS:1;Parent=LTnewLM_280019300.1 ### LTnewLM_28 . polypeptide 487241 489952 . + . ID=LTnewLM_280019300.1:pep;Derives_from=LTnewLM_280019300.1;orthologous_to=LmjF.28.1310_mRNA;ortholog_cluster=OG0003555;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain/Domain of unknown function (DUF4217)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271|Pfam:PF13959;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_28 Pfam protein_match 487535 488041 . + . Parent=LTnewLM_280019300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_28 Pfam protein_match 487595 488020 . + . Parent=LTnewLM_280019300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_28 Pfam protein_match 488156 488491 . + . Parent=LTnewLM_280019300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_28 Pfam protein_match 488648 488785 . + . Parent=LTnewLM_280019300.1:pep;Name=PF13959;signature_desc=Domain of unknown function (DUF4217) ### LTnewLM_28 AUGUSTUS gene 491423 492892 1 + . ID=LTnewLM_280019400 LTnewLM_28 AUGUSTUS mRNA 491423 492892 1 + . ID=LTnewLM_280019400.1;Parent=LTnewLM_280019400 LTnewLM_28 AUGUSTUS CDS 491423 492892 1 + 0 ID=LTnewLM_280019400.1:CDS:1;Parent=LTnewLM_280019400.1 ### LTnewLM_28 . polypeptide 491423 492892 . + . ID=LTnewLM_280019400.1:pep;Derives_from=LTnewLM_280019400.1;orthologous_to=LmjF.28.1320_mRNA;ortholog_cluster=OG0003556;product=term%3DUbiA prenyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01040;Ontology_term=GO:0004659,GO:0016021 LTnewLM_28 Pfam protein_match 491699 492457 . + . Parent=LTnewLM_280019400.1:pep;Name=PF01040;signature_desc=UbiA prenyltransferase family;Ontology_term=GO:0004659,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 494016 495068 1 + . ID=LTnewLM_280019500 LTnewLM_28 AUGUSTUS mRNA 494016 495068 1 + . ID=LTnewLM_280019500.1;Parent=LTnewLM_280019500 LTnewLM_28 AUGUSTUS CDS 494016 495068 1 + 0 ID=LTnewLM_280019500.1:CDS:1;Parent=LTnewLM_280019500.1 ### LTnewLM_28 . polypeptide 494016 495068 . + . ID=LTnewLM_280019500.1:pep;Derives_from=LTnewLM_280019500.1;orthologous_to=LmjF.28.1330_mRNA;ortholog_cluster=OG0003557;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 499068 500120 1 + . ID=LTnewLM_280019600 LTnewLM_28 AUGUSTUS mRNA 499068 500120 1 + . ID=LTnewLM_280019600.1;Parent=LTnewLM_280019600 LTnewLM_28 AUGUSTUS CDS 499068 500120 1 + 0 ID=LTnewLM_280019600.1:CDS:1;Parent=LTnewLM_280019600.1 ### LTnewLM_28 . polypeptide 499068 500120 . + . ID=LTnewLM_280019600.1:pep;Derives_from=LTnewLM_280019600.1;orthologous_to=LmjF.28.1340_mRNA;ortholog_cluster=OG0003558;product=term%3Dhaloacid dehalogenase-like hydrolase/Sucrose-6F-phosphate phosphohydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08282|Pfam:PF05116 LTnewLM_28 Pfam protein_match 499155 500093 . + . Parent=LTnewLM_280019600.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 499737 500033 . + . Parent=LTnewLM_280019600.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase ### LTnewLM_28 AUGUSTUS gene 501332 502333 1 + . ID=LTnewLM_280019700 LTnewLM_28 AUGUSTUS mRNA 501332 502333 1 + . ID=LTnewLM_280019700.1;Parent=LTnewLM_280019700 LTnewLM_28 AUGUSTUS CDS 501332 502333 1 + 0 ID=LTnewLM_280019700.1:CDS:1;Parent=LTnewLM_280019700.1 ### LTnewLM_28 . polypeptide 501332 502333 . + . ID=LTnewLM_280019700.1:pep;Derives_from=LTnewLM_280019700.1;orthologous_to=LmjF.28.1350_mRNA;ortholog_cluster=OG0003559;product=term%3Dhaloacid dehalogenase-like hydrolase/Sucrose-6F-phosphate phosphohydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08282|Pfam:PF05116 LTnewLM_28 Pfam protein_match 501353 502303 . + . Parent=LTnewLM_280019700.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 501944 502252 . + . Parent=LTnewLM_280019700.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase ### LTnewLM_28 AUGUSTUS gene 505014 505883 1 + . ID=LTnewLM_280019800 LTnewLM_28 AUGUSTUS mRNA 505014 505883 1 + . ID=LTnewLM_280019800.1;Parent=LTnewLM_280019800 LTnewLM_28 AUGUSTUS CDS 505014 505883 1 + 0 ID=LTnewLM_280019800.1:CDS:1;Parent=LTnewLM_280019800.1 ### LTnewLM_28 . polypeptide 505014 505883 . + . ID=LTnewLM_280019800.1:pep;Derives_from=LTnewLM_280019800.1;orthologous_to=LmjF.28.1360_mRNA;ortholog_cluster=OG0003560;product=term%3DSucrose-6F-phosphate phosphohydrolase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05116|Pfam:PF08282 LTnewLM_28 Pfam protein_match 505038 505250 . + . Parent=LTnewLM_280019800.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase LTnewLM_28 Pfam protein_match 505038 505844 . + . Parent=LTnewLM_280019800.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 505590 505790 . + . Parent=LTnewLM_280019800.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase ### LTnewLM_28 AUGUSTUS gene 507818 508672 1 + . ID=LTnewLM_280019900 LTnewLM_28 AUGUSTUS mRNA 507818 508672 1 + . ID=LTnewLM_280019900.1;Parent=LTnewLM_280019900 LTnewLM_28 AUGUSTUS CDS 507818 508672 1 + 0 ID=LTnewLM_280019900.1:CDS:1;Parent=LTnewLM_280019900.1 ### LTnewLM_28 . polypeptide 507818 508672 . + . ID=LTnewLM_280019900.1:pep;Derives_from=LTnewLM_280019900.1;orthologous_to=LmjF.28.1370_mRNA;ortholog_cluster=OG0003561;product=term%3DSucrose-6F-phosphate phosphohydrolase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05116|Pfam:PF08282 LTnewLM_28 Pfam protein_match 507839 508096 . + . Parent=LTnewLM_280019900.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase LTnewLM_28 Pfam protein_match 507842 508645 . + . Parent=LTnewLM_280019900.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 508382 508588 . + . Parent=LTnewLM_280019900.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase ### LTnewLM_28 AUGUSTUS gene 510369 511577 1 + . ID=LTnewLM_280020000 LTnewLM_28 AUGUSTUS mRNA 510369 511577 1 + . ID=LTnewLM_280020000.1;Parent=LTnewLM_280020000 LTnewLM_28 AUGUSTUS CDS 510369 511577 1 + 0 ID=LTnewLM_280020000.1:CDS:1;Parent=LTnewLM_280020000.1 ### LTnewLM_28 . polypeptide 510369 511577 . + . ID=LTnewLM_280020000.1:pep;Derives_from=LTnewLM_280020000.1;orthologous_to=LmjF.28.1380_mRNA;ortholog_cluster=OG0003562;product=term%3Dhaloacid dehalogenase-like hydrolase/Sucrose-6F-phosphate phosphohydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08282|Pfam:PF05116 LTnewLM_28 Pfam protein_match 510462 510620 . + . Parent=LTnewLM_280020000.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 510804 511508 . + . Parent=LTnewLM_280020000.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_28 Pfam protein_match 511182 511442 . + . Parent=LTnewLM_280020000.1:pep;Name=PF05116;signature_desc=Sucrose-6F-phosphate phosphohydrolase ### LTnewLM_28 AUGUSTUS gene 514927 515955 1 + . ID=LTnewLM_280020100 LTnewLM_28 AUGUSTUS mRNA 514927 515955 1 + . ID=LTnewLM_280020100.1;Parent=LTnewLM_280020100 LTnewLM_28 AUGUSTUS CDS 514927 515955 1 + 0 ID=LTnewLM_280020100.1:CDS:1;Parent=LTnewLM_280020100.1 ### LTnewLM_28 . polypeptide 514927 515955 . + . ID=LTnewLM_280020100.1:pep;Derives_from=LTnewLM_280020100.1;orthologous_to=LmjF.28.1390_mRNA;ortholog_cluster=OG0003563;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_28 Pfam protein_match 515359 515937 . + . Parent=LTnewLM_280020100.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_28 AUGUSTUS gene 519506 521128 1 + . ID=LTnewLM_280020200 LTnewLM_28 AUGUSTUS mRNA 519506 521128 1 + . ID=LTnewLM_280020200.1;Parent=LTnewLM_280020200 LTnewLM_28 AUGUSTUS CDS 519506 521128 1 + 0 ID=LTnewLM_280020200.1:CDS:1;Parent=LTnewLM_280020200.1 ### LTnewLM_28 . polypeptide 519506 521128 . + . ID=LTnewLM_280020200.1:pep;Derives_from=LTnewLM_280020200.1;orthologous_to=LmjF.28.1400_mRNA;ortholog_cluster=OG0003564;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_28 Pfam protein_match 520625 521074 . + . Parent=LTnewLM_280020200.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_28 AUGUSTUS gene 527956 529152 1 + . ID=LTnewLM_280020300 LTnewLM_28 AUGUSTUS mRNA 527956 529152 1 + . ID=LTnewLM_280020300.1;Parent=LTnewLM_280020300 LTnewLM_28 AUGUSTUS CDS 527956 529152 1 + 0 ID=LTnewLM_280020300.1:CDS:1;Parent=LTnewLM_280020300.1 ### LTnewLM_28 . polypeptide 527956 529152 . + . ID=LTnewLM_280020300.1:pep;Derives_from=LTnewLM_280020300.1;orthologous_to=LmjF.28.1405_mRNA;ortholog_cluster=OG0003565;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 532671 534935 1 + . ID=LTnewLM_280020400 LTnewLM_28 AUGUSTUS mRNA 532671 534935 1 + . ID=LTnewLM_280020400.1;Parent=LTnewLM_280020400 LTnewLM_28 AUGUSTUS CDS 532671 534935 1 + 0 ID=LTnewLM_280020400.1:CDS:1;Parent=LTnewLM_280020400.1 ### LTnewLM_28 . polypeptide 532671 534935 . + . ID=LTnewLM_280020400.1:pep;Derives_from=LTnewLM_280020400.1;orthologous_to=LmjF.28.1410_mRNA;ortholog_cluster=OG0003566;product=term%3DimpB/mucB/samB family/impB/mucB/samB family C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817|Pfam:PF11799;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_28 Pfam protein_match 533379 533837 . + . Parent=LTnewLM_280020400.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 LTnewLM_28 Pfam protein_match 534183 534488 . + . Parent=LTnewLM_280020400.1:pep;Name=PF11799;signature_desc=impB/mucB/samB family C-terminal domain;Ontology_term=GO:0003684,GO:0006281 ### LTnewLM_28 Liftoff gene 537465 539432 . + . ID=LTnewLM_280020500;coverage=1.0;sequence_ID=0.965;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.1420_0 LTnewLM_28 Liftoff mRNA 537465 539432 . + . ID=LTnewLM_280020500.1;Parent=LTnewLM_280020500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 537465 539432 . + 0 ID=LTnewLM_280020500.1:CDS:1;Parent=LTnewLM_280020500.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 537465 539432 . + . ID=LTnewLM_280020500.1:pep;Derives_from=LTnewLM_280020500.1;orthologous_to=LTnewLM_280020600.1,LmjF.28.1420_mRNA;ortholog_cluster=OG0000418;product=term%3DimpB/mucB/samB family/impB/mucB/samB family C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817|Pfam:PF11799;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_28 Pfam protein_match 538077 538511 . + . Parent=LTnewLM_280020500.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 LTnewLM_28 Pfam protein_match 538782 539093 . + . Parent=LTnewLM_280020500.1:pep;Name=PF11799;signature_desc=impB/mucB/samB family C-terminal domain;Ontology_term=GO:0003684,GO:0006281 ### LTnewLM_28 AUGUSTUS gene 541627 541920 1 + . ID=LTnewLM_280020600 LTnewLM_28 AUGUSTUS mRNA 541627 541920 1 + . ID=LTnewLM_280020600.1;Parent=LTnewLM_280020600 LTnewLM_28 AUGUSTUS CDS 541627 541920 1 + 0 ID=LTnewLM_280020600.1:CDS:1;Parent=LTnewLM_280020600.1 ### LTnewLM_28 . polypeptide 541627 541920 . + . ID=LTnewLM_280020600.1:pep;Derives_from=LTnewLM_280020600.1;orthologous_to=LTnewLM_280020500.1,LmjF.28.1420_mRNA;ortholog_cluster=OG0000418;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 542287 543431 0.95 + . ID=LTnewLM_280020700 LTnewLM_28 AUGUSTUS mRNA 542287 543431 0.95 + . ID=LTnewLM_280020700.1;Parent=LTnewLM_280020700 LTnewLM_28 AUGUSTUS CDS 542287 543330 1 + 0 ID=LTnewLM_280020700.1:CDS:1;Parent=LTnewLM_280020700.1 LTnewLM_28 AUGUSTUS CDS 543399 543431 0.95 + 0 ID=LTnewLM_280020700.1:CDS:2;Parent=LTnewLM_280020700.1 ### LTnewLM_28 . polypeptide 542287 543431 . + . ID=LTnewLM_280020700.1:pep;Derives_from=LTnewLM_280020700.1;orthologous_to=LmjF.28.1430_mRNA;ortholog_cluster=OG0003567;product=term%3DimpB/mucB/samB family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_28 Pfam protein_match 542326 542430 . + . Parent=LTnewLM_280020700.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 ### LTnewLM_28 AUGUSTUS gene 545053 547230 1 + . ID=LTnewLM_280020800 LTnewLM_28 AUGUSTUS mRNA 545053 547230 1 + . ID=LTnewLM_280020800.1;Parent=LTnewLM_280020800 LTnewLM_28 AUGUSTUS CDS 545053 547230 1 + 0 ID=LTnewLM_280020800.1:CDS:1;Parent=LTnewLM_280020800.1 ### LTnewLM_28 . polypeptide 545053 547230 . + . ID=LTnewLM_280020800.1:pep;Derives_from=LTnewLM_280020800.1;orthologous_to=LmjF.28.1440_mRNA;ortholog_cluster=OG0003568;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 548768 551002 0.99 + . ID=LTnewLM_280020900 LTnewLM_28 AUGUSTUS mRNA 548768 551002 0.99 + . ID=LTnewLM_280020900.1;Parent=LTnewLM_280020900 LTnewLM_28 AUGUSTUS CDS 548768 551002 0.99 + 0 ID=LTnewLM_280020900.1:CDS:1;Parent=LTnewLM_280020900.1 ### LTnewLM_28 . polypeptide 548768 551002 . + . ID=LTnewLM_280020900.1:pep;Derives_from=LTnewLM_280020900.1;orthologous_to=LmjF.28.1450_mRNA;ortholog_cluster=OG0003569;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 551683 553995 1 + . ID=LTnewLM_280021000 LTnewLM_28 AUGUSTUS mRNA 551683 553995 1 + . ID=LTnewLM_280021000.1;Parent=LTnewLM_280021000 LTnewLM_28 AUGUSTUS CDS 551683 553995 1 + 0 ID=LTnewLM_280021000.1:CDS:1;Parent=LTnewLM_280021000.1 ### LTnewLM_28 . polypeptide 551683 553995 . + . ID=LTnewLM_280021000.1:pep;Derives_from=LTnewLM_280021000.1;orthologous_to=LmjF.28.1460_mRNA;ortholog_cluster=OG0003570;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004;Ontology_term=GO:0016887,GO:0005524 LTnewLM_28 Pfam protein_match 553030 553143 . + . Parent=LTnewLM_280021000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_28 Pfam protein_match 553033 553275 . + . Parent=LTnewLM_280021000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_28 Pfam protein_match 553339 553509 . + . Parent=LTnewLM_280021000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_28 . pseudogene 554782 555887 . + . ID=LTnewLM_280021100:pseudogene;coverage=0.999;sequence_ID=0.962;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1470_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 554782 555887 . + . ID=LTnewLM_280021100.1;Parent=LTnewLM_280021100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 554782 555887 . + . ID=LTnewLM_280021100.1:pseudogenic_exon:1;Parent=LTnewLM_280021100.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 554782 555887 . + . ID=LTnewLM_280021100.1:pep;Derives_from=LTnewLM_280021100.1;orthologous_to=LmjF.28.1470_mRNA;ortholog_cluster=OG0007569;product=term%3DSyntaxin/SNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00804|Pfam:PF05739;Ontology_term=GO:0016020,GO:0005515 LTnewLM_28 Pfam protein_match 554971 555576 . + . Parent=LTnewLM_280021100.1:pep;Name=PF00804;signature_desc=Syntaxin;Ontology_term=GO:0016020 LTnewLM_28 Pfam protein_match 555580 555735 . + . Parent=LTnewLM_280021100.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_28 . pseudogene 558026 558772 . + . ID=LTnewLM_280021200:pseudogene;coverage=0.932;sequence_ID=0.905;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1480_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 558026 558772 . + . ID=LTnewLM_280021200.1;Parent=LTnewLM_280021200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 558026 558772 . + . ID=LTnewLM_280021200.1:pseudogenic_exon:1;Parent=LTnewLM_280021200.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 558026 558772 . + . ID=LTnewLM_280021200.1:pep;Derives_from=LTnewLM_280021200.1;orthologous_to=LmjF.28.1480_mRNA;ortholog_cluster=OG0007570;product=term%3DSyntaxin/SNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00804|Pfam:PF05739;Ontology_term=GO:0016020,GO:0005515 LTnewLM_28 Pfam protein_match 558026 558523 . + . Parent=LTnewLM_280021200.1:pep;Name=PF00804;signature_desc=Syntaxin;Ontology_term=GO:0016020 LTnewLM_28 Pfam protein_match 558527 558637 . + . Parent=LTnewLM_280021200.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 559667 560083 1 + . ID=LTnewLM_280021300 LTnewLM_28 AUGUSTUS mRNA 559667 560083 1 + . ID=LTnewLM_280021300.1;Parent=LTnewLM_280021300 LTnewLM_28 AUGUSTUS CDS 559667 560083 1 + 0 ID=LTnewLM_280021300.1:CDS:1;Parent=LTnewLM_280021300.1 ### LTnewLM_28 . polypeptide 559667 560083 . + . ID=LTnewLM_280021300.1:pep;Derives_from=LTnewLM_280021300.1;orthologous_to=LmjF.28.1490_mRNA;ortholog_cluster=OG0003571;product=term%3DProtein of unknown function (DUF423)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04241 LTnewLM_28 Pfam protein_match 559751 560020 . + . Parent=LTnewLM_280021300.1:pep;Name=PF04241;signature_desc=Protein of unknown function (DUF423) ### LTnewLM_28 AUGUSTUS gene 562270 562668 1 + . ID=LTnewLM_280021400 LTnewLM_28 AUGUSTUS mRNA 562270 562668 1 + . ID=LTnewLM_280021400.1;Parent=LTnewLM_280021400 LTnewLM_28 AUGUSTUS CDS 562270 562668 1 + 0 ID=LTnewLM_280021400.1:CDS:1;Parent=LTnewLM_280021400.1 ### LTnewLM_28 . polypeptide 562270 562668 . + . ID=LTnewLM_280021400.1:pep;Derives_from=LTnewLM_280021400.1;orthologous_to=LmjF.28.1500_mRNA;ortholog_cluster=OG0003572;product=term%3DProtein of unknown function (DUF423)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04241 LTnewLM_28 Pfam protein_match 562342 562611 . + . Parent=LTnewLM_280021400.1:pep;Name=PF04241;signature_desc=Protein of unknown function (DUF423) ### LTnewLM_28 AUGUSTUS gene 564836 565219 1 + . ID=LTnewLM_280021500 LTnewLM_28 AUGUSTUS mRNA 564836 565219 1 + . ID=LTnewLM_280021500.1;Parent=LTnewLM_280021500 LTnewLM_28 AUGUSTUS CDS 564836 565219 1 + 0 ID=LTnewLM_280021500.1:CDS:1;Parent=LTnewLM_280021500.1 ### LTnewLM_28 . polypeptide 564836 565219 . + . ID=LTnewLM_280021500.1:pep;Derives_from=LTnewLM_280021500.1;orthologous_to=LmjF.28.1510_mRNA;ortholog_cluster=OG0003573;product=term%3DProtein of unknown function (DUF423)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04241 LTnewLM_28 Pfam protein_match 564890 565162 . + . Parent=LTnewLM_280021500.1:pep;Name=PF04241;signature_desc=Protein of unknown function (DUF423) ### LTnewLM_28 AUGUSTUS gene 565804 566301 1 + . ID=LTnewLM_280021600 LTnewLM_28 AUGUSTUS mRNA 565804 566301 1 + . ID=LTnewLM_280021600.1;Parent=LTnewLM_280021600 LTnewLM_28 AUGUSTUS CDS 565804 566301 1 + 0 ID=LTnewLM_280021600.1:CDS:1;Parent=LTnewLM_280021600.1 ### LTnewLM_28 . polypeptide 565804 566301 . + . ID=LTnewLM_280021600.1:pep;Derives_from=LTnewLM_280021600.1;orthologous_to=LmjF.28.1515_mRNA;ortholog_cluster=OG0003574;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 567357 569282 1 + . ID=LTnewLM_280021700 LTnewLM_28 AUGUSTUS mRNA 567357 569282 1 + . ID=LTnewLM_280021700.1;Parent=LTnewLM_280021700 LTnewLM_28 AUGUSTUS CDS 567357 569282 1 + 0 ID=LTnewLM_280021700.1:CDS:1;Parent=LTnewLM_280021700.1 ### LTnewLM_28 . polypeptide 567357 569282 . + . ID=LTnewLM_280021700.1:pep;Derives_from=LTnewLM_280021700.1;orthologous_to=LmjF.28.1520_mRNA;ortholog_cluster=OG0003575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 570007 571176 1 + . ID=LTnewLM_280021800 LTnewLM_28 AUGUSTUS mRNA 570007 571176 1 + . ID=LTnewLM_280021800.1;Parent=LTnewLM_280021800 LTnewLM_28 AUGUSTUS CDS 570007 571176 1 + 0 ID=LTnewLM_280021800.1:CDS:1;Parent=LTnewLM_280021800.1 ### LTnewLM_28 . polypeptide 570007 571176 . + . ID=LTnewLM_280021800.1:pep;Derives_from=LTnewLM_280021800.1;orthologous_to=LmjF.28.1530_mRNA;ortholog_cluster=OG0003576;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_28 Pfam protein_match 570127 570615 . + . Parent=LTnewLM_280021800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_28 Pfam protein_match 570730 571053 . + . Parent=LTnewLM_280021800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_28 AUGUSTUS gene 573926 576496 1 + . ID=LTnewLM_280021900 LTnewLM_28 AUGUSTUS mRNA 573926 576496 1 + . ID=LTnewLM_280021900.1;Parent=LTnewLM_280021900 LTnewLM_28 AUGUSTUS CDS 573926 576496 1 + 0 ID=LTnewLM_280021900.1:CDS:1;Parent=LTnewLM_280021900.1 ### LTnewLM_28 . polypeptide 573926 576496 . + . ID=LTnewLM_280021900.1:pep;Derives_from=LTnewLM_280021900.1;orthologous_to=LmjF.28.1540_mRNA;ortholog_cluster=OG0003577;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 579837 580709 1 + . ID=LTnewLM_280022000 LTnewLM_28 AUGUSTUS mRNA 579837 580709 1 + . ID=LTnewLM_280022000.1;Parent=LTnewLM_280022000 LTnewLM_28 AUGUSTUS CDS 579837 580709 1 + 0 ID=LTnewLM_280022000.1:CDS:1;Parent=LTnewLM_280022000.1 ### LTnewLM_28 . polypeptide 579837 580709 . + . ID=LTnewLM_280022000.1:pep;Derives_from=LTnewLM_280022000.1;orthologous_to=LmjF.28.1550_mRNA;ortholog_cluster=OG0003578;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 582223 583908 1 + . ID=LTnewLM_280022100 LTnewLM_28 AUGUSTUS mRNA 582223 583908 1 + . ID=LTnewLM_280022100.1;Parent=LTnewLM_280022100 LTnewLM_28 AUGUSTUS CDS 582223 583908 1 + 0 ID=LTnewLM_280022100.1:CDS:1;Parent=LTnewLM_280022100.1 ### LTnewLM_28 . polypeptide 582223 583908 . + . ID=LTnewLM_280022100.1:pep;Derives_from=LTnewLM_280022100.1;orthologous_to=LmjF.28.1560_mRNA;ortholog_cluster=OG0003579;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 584515 585011 0.56 + . ID=LTnewLM_280022200 LTnewLM_28 AUGUSTUS mRNA 584515 585011 0.56 + . ID=LTnewLM_280022200.1;Parent=LTnewLM_280022200 LTnewLM_28 AUGUSTUS CDS 584515 584657 0.61 + 0 ID=LTnewLM_280022200.1:CDS:1;Parent=LTnewLM_280022200.1 LTnewLM_28 AUGUSTUS CDS 584708 585011 0.56 + 1 ID=LTnewLM_280022200.1:CDS:2;Parent=LTnewLM_280022200.1 ### LTnewLM_28 . polypeptide 584515 585011 . + . ID=LTnewLM_280022200.1:pep;Derives_from=LTnewLM_280022200.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 585941 586981 1 + . ID=LTnewLM_280022300 LTnewLM_28 AUGUSTUS mRNA 585941 586981 1 + . ID=LTnewLM_280022300.1;Parent=LTnewLM_280022300 LTnewLM_28 AUGUSTUS CDS 585941 586981 1 + 0 ID=LTnewLM_280022300.1:CDS:1;Parent=LTnewLM_280022300.1 ### LTnewLM_28 . polypeptide 585941 586981 . + . ID=LTnewLM_280022300.1:pep;Derives_from=LTnewLM_280022300.1;orthologous_to=LmjF.28.1570_mRNA;ortholog_cluster=OG0003580;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561|Pfam:PF12697 LTnewLM_28 Pfam protein_match 586148 586918 . + . Parent=LTnewLM_280022300.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_28 Pfam protein_match 586151 586909 . + . Parent=LTnewLM_280022300.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_28 Pfam protein_match 586151 586918 . + . Parent=LTnewLM_280022300.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_28 AUGUSTUS gene 590862 591095 1 + . ID=LTnewLM_280022400 LTnewLM_28 AUGUSTUS mRNA 590862 591095 1 + . ID=LTnewLM_280022400.1;Parent=LTnewLM_280022400 LTnewLM_28 AUGUSTUS CDS 590862 591095 1 + 0 ID=LTnewLM_280022400.1:CDS:1;Parent=LTnewLM_280022400.1 ### LTnewLM_28 . polypeptide 590862 591095 . + . ID=LTnewLM_280022400.1:pep;Derives_from=LTnewLM_280022400.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 592582 593112 1 + . ID=LTnewLM_280022500 LTnewLM_28 AUGUSTUS mRNA 592582 593112 1 + . ID=LTnewLM_280022500.1;Parent=LTnewLM_280022500 LTnewLM_28 AUGUSTUS CDS 592582 593112 1 + 0 ID=LTnewLM_280022500.1:CDS:1;Parent=LTnewLM_280022500.1 ### LTnewLM_28 . polypeptide 592582 593112 . + . ID=LTnewLM_280022500.1:pep;Derives_from=LTnewLM_280022500.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 594683 595930 1 - . ID=LTnewLM_280022600 LTnewLM_28 AUGUSTUS mRNA 594683 595930 1 - . ID=LTnewLM_280022600.1;Parent=LTnewLM_280022600 LTnewLM_28 AUGUSTUS CDS 594683 595930 1 - 0 ID=LTnewLM_280022600.1:CDS:1;Parent=LTnewLM_280022600.1 ### LTnewLM_28 . polypeptide 594683 595930 . - . ID=LTnewLM_280022600.1:pep;Derives_from=LTnewLM_280022600.1;orthologous_to=LmjF.28.1580_mRNA;ortholog_cluster=OG0003581;product=term%3DThiamine pyrophosphate enzyme%2C N-terminal TPP binding domain/Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02776|Pfam:PF02775;Ontology_term=GO:0030976,GO:0003824 LTnewLM_28 Pfam protein_match 594791 595156 . - . Parent=LTnewLM_280022600.1:pep;Name=PF02775;signature_desc=Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain;Ontology_term=GO:0003824,GO:0030976 LTnewLM_28 Pfam protein_match 595529 595879 . - . Parent=LTnewLM_280022600.1:pep;Name=PF02776;signature_desc=Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain;Ontology_term=GO:0030976 ### LTnewLM_28 AUGUSTUS gene 597447 598727 1 - . ID=LTnewLM_280022700 LTnewLM_28 AUGUSTUS mRNA 597447 598727 1 - . ID=LTnewLM_280022700.1;Parent=LTnewLM_280022700 LTnewLM_28 AUGUSTUS CDS 597447 598727 1 - 0 ID=LTnewLM_280022700.1:CDS:1;Parent=LTnewLM_280022700.1 ### LTnewLM_28 . polypeptide 597447 598727 . - . ID=LTnewLM_280022700.1:pep;Derives_from=LTnewLM_280022700.1;orthologous_to=LmjF.28.1590_mRNA;ortholog_cluster=OG0003582;product=term%3DKelch motif/Galactose oxidase%2C central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13854|Pfam:PF01344|Pfam:PF13418|Pfam:PF13415;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 597996 598124 . - . Parent=LTnewLM_280022700.1:pep;Name=PF13415;signature_desc=Galactose oxidase%2C central domain LTnewLM_28 Pfam protein_match 598011 598157 . - . Parent=LTnewLM_280022700.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_28 Pfam protein_match 598023 598157 . - . Parent=LTnewLM_280022700.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 598056 598163 . - . Parent=LTnewLM_280022700.1:pep;Name=PF13854;signature_desc=Kelch motif ### LTnewLM_28 AUGUSTUS gene 599348 603178 1 - . ID=LTnewLM_280022800 LTnewLM_28 AUGUSTUS mRNA 599348 603178 1 - . ID=LTnewLM_280022800.1;Parent=LTnewLM_280022800 LTnewLM_28 AUGUSTUS CDS 599348 603178 1 - 0 ID=LTnewLM_280022800.1:CDS:1;Parent=LTnewLM_280022800.1 ### LTnewLM_28 . polypeptide 599348 603178 . - . ID=LTnewLM_280022800.1:pep;Derives_from=LTnewLM_280022800.1;orthologous_to=LmjF.28.1600_mRNA;ortholog_cluster=OG0003583;product=term%3DDEAD_2/Helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06733|Pfam:PF13307;Ontology_term=GO:0006139,GO:0016818,GO:0005524,GO:0008026,GO:0004003,GO:0003676,GO:0003677 LTnewLM_28 Pfam protein_match 599918 600445 . - . Parent=LTnewLM_280022800.1:pep;Name=PF13307;signature_desc=Helicase C-terminal domain;Ontology_term=GO:0003676,GO:0005524,GO:0008026,GO:0016818,GO:0006139 LTnewLM_28 Pfam protein_match 601565 602092 . - . Parent=LTnewLM_280022800.1:pep;Name=PF06733;signature_desc=DEAD_2;Ontology_term=GO:0003677,GO:0004003,GO:0005524 ### LTnewLM_28 AUGUSTUS gene 604336 605334 1 - . ID=LTnewLM_280022900 LTnewLM_28 AUGUSTUS mRNA 604336 605334 1 - . ID=LTnewLM_280022900.1;Parent=LTnewLM_280022900 LTnewLM_28 AUGUSTUS CDS 604336 605334 1 - 0 ID=LTnewLM_280022900.1:CDS:1;Parent=LTnewLM_280022900.1 ### LTnewLM_28 . polypeptide 604336 605334 . - . ID=LTnewLM_280022900.1:pep;Derives_from=LTnewLM_280022900.1;orthologous_to=LmjF.28.1610_mRNA;ortholog_cluster=OG0003584;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 606005 609382 1 - . ID=LTnewLM_280023000 LTnewLM_28 AUGUSTUS mRNA 606005 609382 1 - . ID=LTnewLM_280023000.1;Parent=LTnewLM_280023000 LTnewLM_28 AUGUSTUS CDS 606005 609382 1 - 0 ID=LTnewLM_280023000.1:CDS:1;Parent=LTnewLM_280023000.1 ### LTnewLM_28 . polypeptide 606005 609382 . - . ID=LTnewLM_280023000.1:pep;Derives_from=LTnewLM_280023000.1;orthologous_to=LmjF.28.1620_mRNA;ortholog_cluster=OG0003585;product=term%3DtRNA pseudouridine synthase D (TruD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01142;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_28 Pfam protein_match 606614 607846 . - . Parent=LTnewLM_280023000.1:pep;Name=PF01142;signature_desc=tRNA pseudouridine synthase D (TruD);Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_28 AUGUSTUS gene 610706 612574 1 - . ID=LTnewLM_280023100 LTnewLM_28 AUGUSTUS mRNA 610706 612574 1 - . ID=LTnewLM_280023100.1;Parent=LTnewLM_280023100 LTnewLM_28 AUGUSTUS CDS 610706 612574 1 - 0 ID=LTnewLM_280023100.1:CDS:1;Parent=LTnewLM_280023100.1 ### LTnewLM_28 . polypeptide 610706 612574 . - . ID=LTnewLM_280023100.1:pep;Derives_from=LTnewLM_280023100.1;orthologous_to=LmjF.28.1630_mRNA;ortholog_cluster=OG0003586;product=term%3DSANT and BTB domain regulator of CSR%2C BTB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11822 LTnewLM_28 Pfam protein_match 612200 612517 . - . Parent=LTnewLM_280023100.1:pep;Name=PF11822;signature_desc=SANT and BTB domain regulator of CSR%2C BTB domain ### LTnewLM_28 AUGUSTUS gene 613320 613643 1 - . ID=LTnewLM_280023200 LTnewLM_28 AUGUSTUS mRNA 613320 613643 1 - . ID=LTnewLM_280023200.1;Parent=LTnewLM_280023200 LTnewLM_28 AUGUSTUS CDS 613320 613643 1 - 0 ID=LTnewLM_280023200.1:CDS:1;Parent=LTnewLM_280023200.1 ### LTnewLM_28 . polypeptide 613320 613643 . - . ID=LTnewLM_280023200.1:pep;Derives_from=LTnewLM_280023200.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 617885 622006 1 - . ID=LTnewLM_280023300 LTnewLM_28 AUGUSTUS mRNA 617885 622006 1 - . ID=LTnewLM_280023300.1;Parent=LTnewLM_280023300 LTnewLM_28 AUGUSTUS CDS 617885 622006 1 - 0 ID=LTnewLM_280023300.1:CDS:1;Parent=LTnewLM_280023300.1 ### LTnewLM_28 . polypeptide 617885 622006 . - . ID=LTnewLM_280023300.1:pep;Derives_from=LTnewLM_280023300.1;orthologous_to=LmjF.28.1640_mRNA;ortholog_cluster=OG0003587;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 624487 627039 1 - . ID=LTnewLM_280023400 LTnewLM_28 AUGUSTUS mRNA 624487 627039 1 - . ID=LTnewLM_280023400.1;Parent=LTnewLM_280023400 LTnewLM_28 AUGUSTUS CDS 624487 627039 1 - 0 ID=LTnewLM_280023400.1:CDS:1;Parent=LTnewLM_280023400.1 ### LTnewLM_28 . polypeptide 624487 627039 . - . ID=LTnewLM_280023400.1:pep;Derives_from=LTnewLM_280023400.1;orthologous_to=LmjF.28.1650_mRNA;ortholog_cluster=OG0003588;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 627856 630258 1 - . ID=LTnewLM_280023500 LTnewLM_28 AUGUSTUS mRNA 627856 630258 1 - . ID=LTnewLM_280023500.1;Parent=LTnewLM_280023500 LTnewLM_28 AUGUSTUS CDS 627856 630258 1 - 0 ID=LTnewLM_280023500.1:CDS:1;Parent=LTnewLM_280023500.1 ### LTnewLM_28 . polypeptide 627856 630258 . - . ID=LTnewLM_280023500.1:pep;Derives_from=LTnewLM_280023500.1;orthologous_to=LmjF.28.1660_mRNA;ortholog_cluster=OG0003589;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 632470 636441 1 - . ID=LTnewLM_280023600 LTnewLM_28 AUGUSTUS mRNA 632470 636441 1 - . ID=LTnewLM_280023600.1;Parent=LTnewLM_280023600 LTnewLM_28 AUGUSTUS CDS 632470 636441 1 - 0 ID=LTnewLM_280023600.1:CDS:1;Parent=LTnewLM_280023600.1 ### LTnewLM_28 . polypeptide 632470 636441 . - . ID=LTnewLM_280023600.1:pep;Derives_from=LTnewLM_280023600.1;orthologous_to=LmjF.28.1670_mRNA;ortholog_cluster=OG0003590;product=term%3DPX domain/Protein tyrosine and serine/threonine kinase/Protein kinase domain/Lipocalin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00787|Pfam:PF07714|Pfam:PF00069|Pfam:PF13924;Ontology_term=GO:0004672,GO:0035091,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 632791 633246 . - . Parent=LTnewLM_280023600.1:pep;Name=PF13924;signature_desc=Lipocalin-like domain LTnewLM_28 Pfam protein_match 633679 634515 . - . Parent=LTnewLM_280023600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 633883 634515 . - . Parent=LTnewLM_280023600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_28 Pfam protein_match 635755 636021 . - . Parent=LTnewLM_280023600.1:pep;Name=PF00787;signature_desc=PX domain;Ontology_term=GO:0035091 ### LTnewLM_28 AUGUSTUS gene 638887 644913 1 - . ID=LTnewLM_280023700 LTnewLM_28 AUGUSTUS mRNA 638887 644913 1 - . ID=LTnewLM_280023700.1;Parent=LTnewLM_280023700 LTnewLM_28 AUGUSTUS CDS 638887 644913 1 - 0 ID=LTnewLM_280023700.1:CDS:1;Parent=LTnewLM_280023700.1 ### LTnewLM_28 . polypeptide 638887 644913 . - . ID=LTnewLM_280023700.1:pep;Derives_from=LTnewLM_280023700.1;orthologous_to=LmjF.28.1690_mRNA;ortholog_cluster=OG0003591;product=term%3DSulfate permease family/STAS domain/Histidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00916|Pfam:PF01740|Pfam:PF00328;Ontology_term=GO:0003993,GO:0008272,GO:0015116,GO:0016021 LTnewLM_28 Pfam protein_match 641839 642639 . - . Parent=LTnewLM_280023700.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 LTnewLM_28 Pfam protein_match 643324 643506 . - . Parent=LTnewLM_280023700.1:pep;Name=PF01740;signature_desc=STAS domain LTnewLM_28 Pfam protein_match 643666 644757 . - . Parent=LTnewLM_280023700.1:pep;Name=PF00916;signature_desc=Sulfate permease family;Ontology_term=GO:0015116,GO:0008272,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 647837 649294 1 - . ID=LTnewLM_280023800 LTnewLM_28 AUGUSTUS mRNA 647837 649294 1 - . ID=LTnewLM_280023800.1;Parent=LTnewLM_280023800 LTnewLM_28 AUGUSTUS CDS 647837 649294 1 - 0 ID=LTnewLM_280023800.1:CDS:1;Parent=LTnewLM_280023800.1 ### LTnewLM_28 . polypeptide 647837 649294 . - . ID=LTnewLM_280023800.1:pep;Derives_from=LTnewLM_280023800.1;orthologous_to=LmjF.28.1700_mRNA;ortholog_cluster=OG0003592;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 651118 652677 . - . ID=LTnewLM_280023900.1:pep;Derives_from=LTnewLM_280023900.1;orthologous_to=LTnewLM_280023900.2,LTnewLM_280023900.3,LmjF.28.1710_mRNA;ortholog_cluster=OG0000199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 651118 658459 1.51 - . ID=LTnewLM_280023900 LTnewLM_28 AUGUSTUS mRNA 651118 652677 0.82 - . ID=LTnewLM_280023900.1;Parent=LTnewLM_280023900 LTnewLM_28 AUGUSTUS CDS 651118 652677 0.82 - 0 ID=LTnewLM_280023900.1:CDS:1;Parent=LTnewLM_280023900.1 LTnewLM_28 AUGUSTUS mRNA 651118 658459 0.4 - . ID=LTnewLM_280023900.2;Parent=LTnewLM_280023900 LTnewLM_28 AUGUSTUS CDS 651118 653524 0.4 - 1 ID=LTnewLM_280023900.2:CDS:1;Parent=LTnewLM_280023900.2 LTnewLM_28 AUGUSTUS CDS 653595 658459 0.57 - 0 ID=LTnewLM_280023900.2:CDS:2;Parent=LTnewLM_280023900.2 LTnewLM_28 AUGUSTUS mRNA 656097 658459 0.29 - . ID=LTnewLM_280023900.3;Parent=LTnewLM_280023900 LTnewLM_28 AUGUSTUS CDS 656097 656108 0.44 - 0 ID=LTnewLM_280023900.3:CDS:1;Parent=LTnewLM_280023900.3 LTnewLM_28 AUGUSTUS CDS 656240 658459 0.29 - 0 ID=LTnewLM_280023900.3:CDS:2;Parent=LTnewLM_280023900.3 ### LTnewLM_28 . polypeptide 651118 658459 . - . ID=LTnewLM_280023900.2:pep;Derives_from=LTnewLM_280023900.2;orthologous_to=LTnewLM_280023900.1,LTnewLM_280023900.3,LmjF.28.1710_mRNA;ortholog_cluster=OG0000199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 656097 658459 . - . ID=LTnewLM_280023900.3:pep;Derives_from=LTnewLM_280023900.3;orthologous_to=LTnewLM_280023900.1,LTnewLM_280023900.2,LmjF.28.1710_mRNA;ortholog_cluster=OG0000199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 659819 661678 1 - . ID=LTnewLM_280024000 LTnewLM_28 AUGUSTUS mRNA 659819 661678 1 - . ID=LTnewLM_280024000.1;Parent=LTnewLM_280024000 LTnewLM_28 AUGUSTUS CDS 659819 661678 1 - 0 ID=LTnewLM_280024000.1:CDS:1;Parent=LTnewLM_280024000.1 ### LTnewLM_28 . polypeptide 659819 661678 . - . ID=LTnewLM_280024000.1:pep;Derives_from=LTnewLM_280024000.1;orthologous_to=LmjF.28.1720_mRNA;ortholog_cluster=OG0003593;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 663407 666382 1 - . ID=LTnewLM_280024100 LTnewLM_28 AUGUSTUS mRNA 663407 666382 1 - . ID=LTnewLM_280024100.1;Parent=LTnewLM_280024100 LTnewLM_28 AUGUSTUS CDS 663407 666382 1 - 0 ID=LTnewLM_280024100.1:CDS:1;Parent=LTnewLM_280024100.1 ### LTnewLM_28 . polypeptide 663407 666382 . - . ID=LTnewLM_280024100.1:pep;Derives_from=LTnewLM_280024100.1;orthologous_to=LmjF.28.1730_mRNA;ortholog_cluster=OG0003594;product=term%3DHEAT repeats/26S proteasome regulatory subunit RPN2 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13646|Pfam:PF18004 LTnewLM_28 Pfam protein_match 663482 663961 . - . Parent=LTnewLM_280024100.1:pep;Name=PF18004;signature_desc=26S proteasome regulatory subunit RPN2 C-terminal domain LTnewLM_28 Pfam protein_match 664241 664519 . - . Parent=LTnewLM_280024100.1:pep;Name=PF13646;signature_desc=HEAT repeats ### LTnewLM_28 AUGUSTUS gene 667552 669321 1 - . ID=LTnewLM_280024200 LTnewLM_28 AUGUSTUS mRNA 667552 669321 1 - . ID=LTnewLM_280024200.1;Parent=LTnewLM_280024200 LTnewLM_28 AUGUSTUS CDS 667552 669321 1 - 0 ID=LTnewLM_280024200.1:CDS:1;Parent=LTnewLM_280024200.1 ### LTnewLM_28 . polypeptide 667552 669321 . - . ID=LTnewLM_280024200.1:pep;Derives_from=LTnewLM_280024200.1;orthologous_to=LmjF.28.1740_mRNA;ortholog_cluster=OG0003595;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_28 Pfam protein_match 667570 667884 . - . Parent=LTnewLM_280024200.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 LTnewLM_28 Pfam protein_match 668077 668388 . - . Parent=LTnewLM_280024200.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_28 AUGUSTUS gene 670151 672973 1 - . ID=LTnewLM_280024300 LTnewLM_28 AUGUSTUS mRNA 670151 672973 1 - . ID=LTnewLM_280024300.1;Parent=LTnewLM_280024300 LTnewLM_28 AUGUSTUS CDS 670151 672973 1 - 0 ID=LTnewLM_280024300.1:CDS:1;Parent=LTnewLM_280024300.1 ### LTnewLM_28 . polypeptide 670151 672973 . - . ID=LTnewLM_280024300.1:pep;Derives_from=LTnewLM_280024300.1;orthologous_to=LmjF.28.1750_mRNA;ortholog_cluster=OG0003596;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 673906 676701 . - . ID=LTnewLM_280024400.1:pep;Derives_from=LTnewLM_280024400.1;orthologous_to=LTnewLM_280024400.2,LmjF.28.1760_mRNA;ortholog_cluster=OG0000419;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 673906 679929 2 - . ID=LTnewLM_280024400 LTnewLM_28 AUGUSTUS mRNA 673906 676701 1 - . ID=LTnewLM_280024400.1;Parent=LTnewLM_280024400 LTnewLM_28 AUGUSTUS CDS 673906 676701 1 - 0 ID=LTnewLM_280024400.1:CDS:1;Parent=LTnewLM_280024400.1 LTnewLM_28 AUGUSTUS mRNA 673906 679929 1 - . ID=LTnewLM_280024400.2;Parent=LTnewLM_280024400 LTnewLM_28 AUGUSTUS CDS 673906 679929 1 - 0 ID=LTnewLM_280024400.2:CDS:1;Parent=LTnewLM_280024400.2 ### LTnewLM_28 . polypeptide 673906 679929 . - . ID=LTnewLM_280024400.2:pep;Derives_from=LTnewLM_280024400.2;orthologous_to=LTnewLM_280024400.1,LmjF.28.1760_mRNA;ortholog_cluster=OG0000419;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 678046 678654 . - . Parent=LTnewLM_280024400.2:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_28 AUGUSTUS gene 681955 683157 1 - . ID=LTnewLM_280024500 LTnewLM_28 AUGUSTUS mRNA 681955 683157 1 - . ID=LTnewLM_280024500.1;Parent=LTnewLM_280024500 LTnewLM_28 AUGUSTUS CDS 681955 683157 1 - 0 ID=LTnewLM_280024500.1:CDS:1;Parent=LTnewLM_280024500.1 ### LTnewLM_28 . polypeptide 681955 683157 . - . ID=LTnewLM_280024500.1:pep;Derives_from=LTnewLM_280024500.1;orthologous_to=LmjF.28.1770_mRNA;ortholog_cluster=OG0003597;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_28 Pfam protein_match 682639 682974 . - . Parent=LTnewLM_280024500.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_28 AUGUSTUS gene 684292 686892 1 - . ID=LTnewLM_280024600 LTnewLM_28 AUGUSTUS mRNA 684292 686892 1 - . ID=LTnewLM_280024600.1;Parent=LTnewLM_280024600 LTnewLM_28 AUGUSTUS CDS 684292 686892 1 - 0 ID=LTnewLM_280024600.1:CDS:1;Parent=LTnewLM_280024600.1 ### LTnewLM_28 . polypeptide 684292 686892 . - . ID=LTnewLM_280024600.1:pep;Derives_from=LTnewLM_280024600.1;orthologous_to=LmjF.28.1780_mRNA;ortholog_cluster=OG0003598;product=term%3DToprim domain/DNA topoisomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01751|Pfam:PF01131;Ontology_term=GO:0006265,GO:0003916,GO:0003677 LTnewLM_28 Pfam protein_match 685177 686412 . - . Parent=LTnewLM_280024600.1:pep;Name=PF01131;signature_desc=DNA topoisomerase;Ontology_term=GO:0003677,GO:0003916,GO:0006265 LTnewLM_28 Pfam protein_match 686458 686880 . - . Parent=LTnewLM_280024600.1:pep;Name=PF01751;signature_desc=Toprim domain ### LTnewLM_28 . pseudogene 687870 689645 . - . ID=LTnewLM_280024700:pseudogene;coverage=1.0;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1790_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 687870 689645 . - . ID=LTnewLM_280024700.1;Parent=LTnewLM_280024700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 687870 689645 . - . ID=LTnewLM_280024700.1:pseudogenic_exon:1;Parent=LTnewLM_280024700.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 687870 689645 . - . ID=LTnewLM_280024700.1:pep;Derives_from=LTnewLM_280024700.1;orthologous_to=LmjF.28.1790_mRNA;ortholog_cluster=OG0007571;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_28 Pfam protein_match 688566 689003 . - . Parent=LTnewLM_280024700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_28 Liftoff gene 690880 699462 . - . ID=LTnewLM_280024800;coverage=0.988;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1800_0 LTnewLM_28 Liftoff mRNA 690880 699462 . - . ID=LTnewLM_280024800.1;Parent=LTnewLM_280024800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 690880 699462 . - 0 ID=LTnewLM_280024800.1:CDS:1;Parent=LTnewLM_280024800.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 690880 699462 . - . ID=LTnewLM_280024800.1:pep;Derives_from=LTnewLM_280024800.1;orthologous_to=LmjF.28.1800_mRNA;ortholog_cluster=OG0003599;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 701595 702125 1 - . ID=LTnewLM_280024900 LTnewLM_28 AUGUSTUS mRNA 701595 702125 1 - . ID=LTnewLM_280024900.1;Parent=LTnewLM_280024900 LTnewLM_28 AUGUSTUS CDS 701595 702125 1 - 0 ID=LTnewLM_280024900.1:CDS:1;Parent=LTnewLM_280024900.1 ### LTnewLM_28 . polypeptide 701595 702125 . - . ID=LTnewLM_280024900.1:pep;Derives_from=LTnewLM_280024900.1;orthologous_to=LTnewLM_300027400.1,LmjF.28.1810_mRNA;ortholog_cluster=OG0000420;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 704119 705522 1 - . ID=LTnewLM_280025000 LTnewLM_28 AUGUSTUS mRNA 704119 705522 1 - . ID=LTnewLM_280025000.1;Parent=LTnewLM_280025000 LTnewLM_28 AUGUSTUS CDS 704119 705522 1 - 0 ID=LTnewLM_280025000.1:CDS:1;Parent=LTnewLM_280025000.1 ### LTnewLM_28 . polypeptide 704119 705522 . - . ID=LTnewLM_280025000.1:pep;Derives_from=LTnewLM_280025000.1;orthologous_to=LmjF.28.1820_mRNA;ortholog_cluster=OG0003600;product=term%3DOB-fold nucleic acid binding domain/Replication protein A OB domain/Replication factor-A C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF16900|Pfam:PF08646;Ontology_term=GO:0003676 LTnewLM_28 Pfam protein_match 704227 704646 . - . Parent=LTnewLM_280025000.1:pep;Name=PF08646;signature_desc=Replication factor-A C terminal domain LTnewLM_28 Pfam protein_match 704836 705120 . - . Parent=LTnewLM_280025000.1:pep;Name=PF16900;signature_desc=Replication protein A OB domain LTnewLM_28 Pfam protein_match 705214 705456 . - . Parent=LTnewLM_280025000.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 ### LTnewLM_28 AUGUSTUS gene 706863 710660 1 - . ID=LTnewLM_280025100 LTnewLM_28 AUGUSTUS mRNA 706863 710660 1 - . ID=LTnewLM_280025100.1;Parent=LTnewLM_280025100 LTnewLM_28 AUGUSTUS CDS 706863 710660 1 - 0 ID=LTnewLM_280025100.1:CDS:1;Parent=LTnewLM_280025100.1 ### LTnewLM_28 . polypeptide 706863 710660 . - . ID=LTnewLM_280025100.1:pep;Derives_from=LTnewLM_280025100.1;orthologous_to=LmjF.28.1830_mRNA;ortholog_cluster=OG0003601;product=term%3DSNF2-related domain/Type III restriction enzyme%2C res subunit/Zinc finger%2C C3HC4 type (RING finger)/Ring finger domain/zinc-RING finger domain/RING-type zinc-finger/Prokaryotic RING finger family 4/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00176|Pfam:PF04851|Pfam:PF13920|Pfam:PF13923|Pfam:PF13639|Pfam:PF14634|Pfam:PF13445|Pfam:PF00097|Pfam:PF14447|Pfam:PF00271;Ontology_term=GO:0008270,GO:0005524,GO:0046872,GO:0005515,GO:0016787,GO:0003677 LTnewLM_28 Pfam protein_match 707127 707468 . - . Parent=LTnewLM_280025100.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_28 Pfam protein_match 707658 707789 . - . Parent=LTnewLM_280025100.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_28 Pfam protein_match 707661 707780 . - . Parent=LTnewLM_280025100.1:pep;Name=PF14447;signature_desc=Prokaryotic RING finger family 4 LTnewLM_28 Pfam protein_match 707664 707783 . - . Parent=LTnewLM_280025100.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_28 Pfam protein_match 707667 707783 . - . Parent=LTnewLM_280025100.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_28 Pfam protein_match 707670 707780 . - . Parent=LTnewLM_280025100.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_28 Pfam protein_match 707670 707783 . - . Parent=LTnewLM_280025100.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_28 Pfam protein_match 707676 707780 . - . Parent=LTnewLM_280025100.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_28 Pfam protein_match 708063 709481 . - . Parent=LTnewLM_280025100.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_28 Pfam protein_match 708483 709097 . - . Parent=LTnewLM_280025100.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_28 . pseudogene 711758 712473 . - . ID=LTnewLM_280025200:pseudogene;coverage=0.994;sequence_ID=0.958;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1840_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 711758 712473 . - . ID=LTnewLM_280025200.1;Parent=LTnewLM_280025200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 711758 712473 . - . ID=LTnewLM_280025200.1:pseudogenic_exon:1;Parent=LTnewLM_280025200.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 711758 712473 . - . ID=LTnewLM_280025200.1:pep;Derives_from=LTnewLM_280025200.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 713034 715931 1 - . ID=LTnewLM_280025300 LTnewLM_28 AUGUSTUS mRNA 713034 715931 1 - . ID=LTnewLM_280025300.1;Parent=LTnewLM_280025300 LTnewLM_28 AUGUSTUS CDS 713034 715931 1 - 0 ID=LTnewLM_280025300.1:CDS:1;Parent=LTnewLM_280025300.1 ### LTnewLM_28 . polypeptide 713034 715931 . - . ID=LTnewLM_280025300.1:pep;Derives_from=LTnewLM_280025300.1;orthologous_to=LmjF.28.1850_mRNA;ortholog_cluster=OG0003602;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_28 Pfam protein_match 713079 714017 . - . Parent=LTnewLM_280025300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_28 Pfam protein_match 713676 714026 . - . Parent=LTnewLM_280025300.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_28 AUGUSTUS gene 717213 718079 1 - . ID=LTnewLM_280025400 LTnewLM_28 AUGUSTUS mRNA 717213 718079 1 - . ID=LTnewLM_280025400.1;Parent=LTnewLM_280025400 LTnewLM_28 AUGUSTUS CDS 717213 718079 1 - 0 ID=LTnewLM_280025400.1:CDS:1;Parent=LTnewLM_280025400.1 ### LTnewLM_28 . polypeptide 717213 718079 . - . ID=LTnewLM_280025400.1:pep;Derives_from=LTnewLM_280025400.1;orthologous_to=LmjF.28.1860_mRNA;ortholog_cluster=OG0003603;product=term%3DDomain of unknown function (DUF4586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15239 LTnewLM_28 Pfam protein_match 717231 718076 . - . Parent=LTnewLM_280025400.1:pep;Name=PF15239;signature_desc=Domain of unknown function (DUF4586) ### LTnewLM_28 AUGUSTUS gene 718899 720917 1 - . ID=LTnewLM_280025500 LTnewLM_28 AUGUSTUS mRNA 718899 720917 1 - . ID=LTnewLM_280025500.1;Parent=LTnewLM_280025500 LTnewLM_28 AUGUSTUS CDS 718899 720917 1 - 0 ID=LTnewLM_280025500.1:CDS:1;Parent=LTnewLM_280025500.1 ### LTnewLM_28 . polypeptide 718899 720917 . - . ID=LTnewLM_280025500.1:pep;Derives_from=LTnewLM_280025500.1;orthologous_to=LmjF.28.1870_mRNA;ortholog_cluster=OG0003604;product=term%3DLysine methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10294 LTnewLM_28 Pfam protein_match 719358 719747 . - . Parent=LTnewLM_280025500.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_28 AUGUSTUS gene 724445 728227 1 - . ID=LTnewLM_280025600 LTnewLM_28 AUGUSTUS mRNA 724445 728227 1 - . ID=LTnewLM_280025600.1;Parent=LTnewLM_280025600 LTnewLM_28 AUGUSTUS CDS 724445 728227 1 - 0 ID=LTnewLM_280025600.1:CDS:1;Parent=LTnewLM_280025600.1 ### LTnewLM_28 . polypeptide 724445 728227 . - . ID=LTnewLM_280025600.1:pep;Derives_from=LTnewLM_280025600.1;orthologous_to=LmjF.28.1880_mRNA;ortholog_cluster=OG0003605;product=term%3DAARP2CN (NUC121) domain/40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08142|Pfam:PF04950;Ontology_term=GO:0042254,GO:0005634 LTnewLM_28 Pfam protein_match 724967 725857 . - . Parent=LTnewLM_280025600.1:pep;Name=PF04950;signature_desc=40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal LTnewLM_28 Pfam protein_match 727271 727525 . - . Parent=LTnewLM_280025600.1:pep;Name=PF08142;signature_desc=AARP2CN (NUC121) domain;Ontology_term=GO:0042254,GO:0005634 ### LTnewLM_28 AUGUSTUS gene 729355 730728 1 - . ID=LTnewLM_280025700 LTnewLM_28 AUGUSTUS mRNA 729355 730728 1 - . ID=LTnewLM_280025700.1;Parent=LTnewLM_280025700 LTnewLM_28 AUGUSTUS CDS 729355 730728 1 - 0 ID=LTnewLM_280025700.1:CDS:1;Parent=LTnewLM_280025700.1 ### LTnewLM_28 . polypeptide 729355 730728 . - . ID=LTnewLM_280025700.1:pep;Derives_from=LTnewLM_280025700.1;orthologous_to=LmjF.28.1890_mRNA;ortholog_cluster=OG0003606;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_28 Pfam protein_match 729541 729897 . - . Parent=LTnewLM_280025700.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_28 AUGUSTUS gene 732806 733102 1 - . ID=LTnewLM_280025800 LTnewLM_28 AUGUSTUS mRNA 732806 733102 1 - . ID=LTnewLM_280025800.1;Parent=LTnewLM_280025800 LTnewLM_28 AUGUSTUS CDS 732806 733102 1 - 0 ID=LTnewLM_280025800.1:CDS:1;Parent=LTnewLM_280025800.1 ### LTnewLM_28 . polypeptide 732806 733102 . - . ID=LTnewLM_280025800.1:pep;Derives_from=LTnewLM_280025800.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 734387 736123 1 - . ID=LTnewLM_280025900 LTnewLM_28 AUGUSTUS mRNA 734387 736123 1 - . ID=LTnewLM_280025900.1;Parent=LTnewLM_280025900 LTnewLM_28 AUGUSTUS CDS 734387 736123 1 - 0 ID=LTnewLM_280025900.1:CDS:1;Parent=LTnewLM_280025900.1 ### LTnewLM_28 . polypeptide 734387 736123 . - . ID=LTnewLM_280025900.1:pep;Derives_from=LTnewLM_280025900.1;orthologous_to=LmjF.28.1900_mRNA;ortholog_cluster=OG0003607;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_28 Pfam protein_match 735770 735901 . - . Parent=LTnewLM_280025900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_28 AUGUSTUS gene 737071 739113 1 - . ID=LTnewLM_280026000 LTnewLM_28 AUGUSTUS mRNA 737071 739113 1 - . ID=LTnewLM_280026000.1;Parent=LTnewLM_280026000 LTnewLM_28 AUGUSTUS CDS 737071 739113 1 - 0 ID=LTnewLM_280026000.1:CDS:1;Parent=LTnewLM_280026000.1 ### LTnewLM_28 . polypeptide 737071 739113 . - . ID=LTnewLM_280026000.1:pep;Derives_from=LTnewLM_280026000.1;orthologous_to=LmjF.28.1910_mRNA;ortholog_cluster=OG0003608;product=term%3DBCCIP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13862 LTnewLM_28 Pfam protein_match 737257 738102 . - . Parent=LTnewLM_280026000.1:pep;Name=PF13862;signature_desc=BCCIP ### LTnewLM_28 AUGUSTUS gene 740797 741138 1 - . ID=LTnewLM_280026100 LTnewLM_28 AUGUSTUS mRNA 740797 741138 1 - . ID=LTnewLM_280026100.1;Parent=LTnewLM_280026100 LTnewLM_28 AUGUSTUS CDS 740797 741138 1 - 0 ID=LTnewLM_280026100.1:CDS:1;Parent=LTnewLM_280026100.1 ### LTnewLM_28 . polypeptide 740797 741138 . - . ID=LTnewLM_280026100.1:pep;Derives_from=LTnewLM_280026100.1;orthologous_to=LmjF.28.1920_mRNA;ortholog_cluster=OG0003609;product=term%3DDouble-stranded DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01984;Ontology_term=GO:0003677 LTnewLM_28 Pfam protein_match 740821 741114 . - . Parent=LTnewLM_280026100.1:pep;Name=PF01984;signature_desc=Double-stranded DNA-binding domain;Ontology_term=GO:0003677 ### LTnewLM_28 AUGUSTUS gene 744361 745908 1 - . ID=LTnewLM_280026200 LTnewLM_28 AUGUSTUS mRNA 744361 745908 1 - . ID=LTnewLM_280026200.1;Parent=LTnewLM_280026200 LTnewLM_28 AUGUSTUS CDS 744361 745908 1 - 0 ID=LTnewLM_280026200.1:CDS:1;Parent=LTnewLM_280026200.1 ### LTnewLM_28 . polypeptide 744361 745908 . - . ID=LTnewLM_280026200.1:pep;Derives_from=LTnewLM_280026200.1;orthologous_to=LTnewLM_280026300.1,LTnewLM_280026300.2,LmjF.28.1930_mRNA;ortholog_cluster=OG0000200;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_28 Pfam protein_match 744379 745413 . - . Parent=LTnewLM_280026200.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_28 . polypeptide 748742 749638 . - . ID=LTnewLM_280026300.1:pep;Derives_from=LTnewLM_280026300.1;orthologous_to=LTnewLM_280026200.1,LTnewLM_280026300.2,LmjF.28.1930_mRNA;ortholog_cluster=OG0000200;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_28 Pfam protein_match 748760 749635 . - . Parent=LTnewLM_280026300.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_28 AUGUSTUS gene 748742 750274 2 - . ID=LTnewLM_280026300 LTnewLM_28 AUGUSTUS mRNA 748742 749638 1 - . ID=LTnewLM_280026300.1;Parent=LTnewLM_280026300 LTnewLM_28 AUGUSTUS CDS 748742 749638 1 - 0 ID=LTnewLM_280026300.1:CDS:1;Parent=LTnewLM_280026300.1 LTnewLM_28 AUGUSTUS mRNA 748742 750274 1 - . ID=LTnewLM_280026300.2;Parent=LTnewLM_280026300 LTnewLM_28 AUGUSTUS CDS 748742 750274 1 - 0 ID=LTnewLM_280026300.2:CDS:1;Parent=LTnewLM_280026300.2 ### LTnewLM_28 . polypeptide 748742 750274 . - . ID=LTnewLM_280026300.2:pep;Derives_from=LTnewLM_280026300.2;orthologous_to=LTnewLM_280026200.1,LTnewLM_280026300.1,LmjF.28.1930_mRNA;ortholog_cluster=OG0000200;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_28 Pfam protein_match 748760 749794 . - . Parent=LTnewLM_280026300.2:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_28 AUGUSTUS gene 752215 754251 1 - . ID=LTnewLM_280026400 LTnewLM_28 AUGUSTUS mRNA 752215 754251 1 - . ID=LTnewLM_280026400.1;Parent=LTnewLM_280026400 LTnewLM_28 AUGUSTUS CDS 752215 754251 1 - 0 ID=LTnewLM_280026400.1:CDS:1;Parent=LTnewLM_280026400.1 ### LTnewLM_28 . polypeptide 752215 754251 . - . ID=LTnewLM_280026400.1:pep;Derives_from=LTnewLM_280026400.1;orthologous_to=LmjF.28.1940_mRNA;ortholog_cluster=OG0003610;product=term%3DCorA-like Mg2+ transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01544;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_28 Pfam protein_match 752281 752841 . - . Parent=LTnewLM_280026400.1:pep;Name=PF01544;signature_desc=CorA-like Mg2+ transporter protein;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_28 . pseudogene 758170 760462 . - . ID=LTnewLM_280026500:pseudogene;coverage=0.995;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1950_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 758170 760462 . - . ID=LTnewLM_280026500.1;Parent=LTnewLM_280026500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 758170 760462 . - . ID=LTnewLM_280026500.1:pseudogenic_exon:1;Parent=LTnewLM_280026500.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 758170 760462 . - . ID=LTnewLM_280026500.1:pep;Derives_from=LTnewLM_280026500.1;orthologous_to=LmjF.28.1950_mRNA;ortholog_cluster=OG0007572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 Liftoff gene 763943 766504 . - . ID=LTnewLM_280026600;coverage=1.0;sequence_ID=0.964;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.1960_0 LTnewLM_28 Liftoff mRNA 763943 766504 . - . ID=LTnewLM_280026600.1;Parent=LTnewLM_280026600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 763943 766504 . - 0 ID=LTnewLM_280026600.1:CDS:1;Parent=LTnewLM_280026600.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 763943 766504 . - . ID=LTnewLM_280026600.1:pep;Derives_from=LTnewLM_280026600.1;orthologous_to=LmjF.28.1960_mRNA;ortholog_cluster=OG0003611;product=term%3DElongation factor Tu GTP binding domain/Elongation Factor G%2C domain III/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF14492|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_28 Pfam protein_match 763988 764230 . - . Parent=LTnewLM_280026600.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_28 Pfam protein_match 764726 764932 . - . Parent=LTnewLM_280026600.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_28 Pfam protein_match 765371 766297 . - . Parent=LTnewLM_280026600.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_28 AUGUSTUS gene 769907 770425 1 - . ID=LTnewLM_280026700 LTnewLM_28 AUGUSTUS mRNA 769907 770425 1 - . ID=LTnewLM_280026700.1;Parent=LTnewLM_280026700 LTnewLM_28 AUGUSTUS CDS 769907 770425 1 - 0 ID=LTnewLM_280026700.1:CDS:1;Parent=LTnewLM_280026700.1 ### LTnewLM_28 . polypeptide 769907 770425 . - . ID=LTnewLM_280026700.1:pep;Derives_from=LTnewLM_280026700.1;orthologous_to=LmjF.28.1970_mRNA;ortholog_cluster=OG0003612;product=term%3DRibose/Galactose Isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02502;Ontology_term=GO:0005975,GO:0016853 LTnewLM_28 Pfam protein_match 769994 770413 . - . Parent=LTnewLM_280026700.1:pep;Name=PF02502;signature_desc=Ribose/Galactose Isomerase;Ontology_term=GO:0016853,GO:0005975 ### LTnewLM_28 AUGUSTUS gene 772026 776306 1 - . ID=LTnewLM_280026800 LTnewLM_28 AUGUSTUS mRNA 772026 776306 1 - . ID=LTnewLM_280026800.1;Parent=LTnewLM_280026800 LTnewLM_28 AUGUSTUS CDS 772026 776306 1 - 0 ID=LTnewLM_280026800.1:CDS:1;Parent=LTnewLM_280026800.1 ### LTnewLM_28 . polypeptide 772026 776306 . - . ID=LTnewLM_280026800.1:pep;Derives_from=LTnewLM_280026800.1;orthologous_to=LmjF.28.1980_mRNA;ortholog_cluster=OG0003613;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 780616 782877 1 - . ID=LTnewLM_280026900 LTnewLM_28 AUGUSTUS mRNA 780616 782877 1 - . ID=LTnewLM_280026900.1;Parent=LTnewLM_280026900 LTnewLM_28 AUGUSTUS CDS 780616 782877 1 - 0 ID=LTnewLM_280026900.1:CDS:1;Parent=LTnewLM_280026900.1 ### LTnewLM_28 . polypeptide 780616 782877 . - . ID=LTnewLM_280026900.1:pep;Derives_from=LTnewLM_280026900.1;orthologous_to=LmjF.28.1990_mRNA;ortholog_cluster=OG0003614;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_28 Pfam protein_match 782275 782337 . - . Parent=LTnewLM_280026900.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_28 Pfam protein_match 782446 782502 . - . Parent=LTnewLM_280026900.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_28 AUGUSTUS gene 784857 785186 1 - . ID=LTnewLM_280027000 LTnewLM_28 AUGUSTUS mRNA 784857 785186 1 - . ID=LTnewLM_280027000.1;Parent=LTnewLM_280027000 LTnewLM_28 AUGUSTUS CDS 784857 785186 1 - 0 ID=LTnewLM_280027000.1:CDS:1;Parent=LTnewLM_280027000.1 ### LTnewLM_28 . polypeptide 784857 785186 . - . ID=LTnewLM_280027000.1:pep;Derives_from=LTnewLM_280027000.1;orthologous_to=LmjF.28.1995_mRNA;ortholog_cluster=OG0003615;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 786137 786647 0.77 - . ID=LTnewLM_280027100 LTnewLM_28 AUGUSTUS mRNA 786137 786647 0.77 - . ID=LTnewLM_280027100.1;Parent=LTnewLM_280027100 LTnewLM_28 AUGUSTUS CDS 786137 786212 0.81 - 1 ID=LTnewLM_280027100.1:CDS:1;Parent=LTnewLM_280027100.1 LTnewLM_28 AUGUSTUS CDS 786262 786647 0.77 - 0 ID=LTnewLM_280027100.1:CDS:2;Parent=LTnewLM_280027100.1 ### LTnewLM_28 . polypeptide 786137 786647 . - . ID=LTnewLM_280027100.1:pep;Derives_from=LTnewLM_280027100.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 796395 799025 1 - . ID=LTnewLM_280027200 LTnewLM_28 AUGUSTUS mRNA 796395 799025 1 - . ID=LTnewLM_280027200.1;Parent=LTnewLM_280027200 LTnewLM_28 AUGUSTUS CDS 796395 799025 1 - 0 ID=LTnewLM_280027200.1:CDS:1;Parent=LTnewLM_280027200.1 ### LTnewLM_28 . polypeptide 796395 799025 . - . ID=LTnewLM_280027200.1:pep;Derives_from=LTnewLM_280027200.1;orthologous_to=LmjF.28.2000_mRNA;ortholog_cluster=OG0003616;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 798141 798986 . - . Parent=LTnewLM_280027200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 798153 798983 . - . Parent=LTnewLM_280027200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_28 AUGUSTUS gene 801697 803349 1 - . ID=LTnewLM_280027300 LTnewLM_28 AUGUSTUS mRNA 801697 803349 1 - . ID=LTnewLM_280027300.1;Parent=LTnewLM_280027300 LTnewLM_28 AUGUSTUS CDS 801697 803349 1 - 0 ID=LTnewLM_280027300.1:CDS:1;Parent=LTnewLM_280027300.1 ### LTnewLM_28 . polypeptide 801697 803349 . - . ID=LTnewLM_280027300.1:pep;Derives_from=LTnewLM_280027300.1;orthologous_to=LmjF.28.2010_mRNA;ortholog_cluster=OG0003617;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 804117 805853 1 - . ID=LTnewLM_280027400 LTnewLM_28 AUGUSTUS mRNA 804117 805853 1 - . ID=LTnewLM_280027400.1;Parent=LTnewLM_280027400 LTnewLM_28 AUGUSTUS CDS 804117 805853 1 - 0 ID=LTnewLM_280027400.1:CDS:1;Parent=LTnewLM_280027400.1 ### LTnewLM_28 . polypeptide 804117 805853 . - . ID=LTnewLM_280027400.1:pep;Derives_from=LTnewLM_280027400.1;orthologous_to=LmjF.28.2020_mRNA;ortholog_cluster=OG0003618;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 806838 807359 1 - . ID=LTnewLM_280027500 LTnewLM_28 AUGUSTUS mRNA 806838 807359 1 - . ID=LTnewLM_280027500.1;Parent=LTnewLM_280027500 LTnewLM_28 AUGUSTUS CDS 806838 807359 1 - 0 ID=LTnewLM_280027500.1:CDS:1;Parent=LTnewLM_280027500.1 ### LTnewLM_28 . polypeptide 806838 807359 . - . ID=LTnewLM_280027500.1:pep;Derives_from=LTnewLM_280027500.1;orthologous_to=LmjF.28.2030_mRNA;ortholog_cluster=OG0003619;product=term%3DGRIM-19 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06212 LTnewLM_28 Pfam protein_match 806919 807272 . - . Parent=LTnewLM_280027500.1:pep;Name=PF06212;signature_desc=GRIM-19 protein ### LTnewLM_28 AUGUSTUS gene 808488 809084 1 - . ID=LTnewLM_280027600 LTnewLM_28 AUGUSTUS mRNA 808488 809084 1 - . ID=LTnewLM_280027600.1;Parent=LTnewLM_280027600 LTnewLM_28 AUGUSTUS CDS 808488 809084 1 - 0 ID=LTnewLM_280027600.1:CDS:1;Parent=LTnewLM_280027600.1 ### LTnewLM_28 . polypeptide 808488 809084 . - . ID=LTnewLM_280027600.1:pep;Derives_from=LTnewLM_280027600.1;orthologous_to=LmjF.28.2040_mRNA;ortholog_cluster=OG0003620;product=term%3DDPCD protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14913 LTnewLM_28 Pfam protein_match 808530 809075 . - . Parent=LTnewLM_280027600.1:pep;Name=PF14913;signature_desc=DPCD protein family ### LTnewLM_28 AUGUSTUS gene 809803 812814 1 - . ID=LTnewLM_280027700 LTnewLM_28 AUGUSTUS mRNA 809803 812814 1 - . ID=LTnewLM_280027700.1;Parent=LTnewLM_280027700 LTnewLM_28 AUGUSTUS CDS 809803 812814 1 - 0 ID=LTnewLM_280027700.1:CDS:1;Parent=LTnewLM_280027700.1 ### LTnewLM_28 . polypeptide 809803 812814 . - . ID=LTnewLM_280027700.1:pep;Derives_from=LTnewLM_280027700.1;orthologous_to=LmjF.28.2050_mRNA;ortholog_cluster=OG0003621;product=term%3DAMP-binding enzyme/Ankyrin repeat/Ankyrin repeats (3 copies)/Ankyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501|Pfam:PF00023|Pfam:PF12796|Pfam:PF13637;Ontology_term=GO:0003824,GO:0005515,GO:0008152 LTnewLM_28 Pfam protein_match 810076 810219 . - . Parent=LTnewLM_280027700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_28 Pfam protein_match 810136 810381 . - . Parent=LTnewLM_280027700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_28 Pfam protein_match 810334 810441 . - . Parent=LTnewLM_280027700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 811324 812340 . - . Parent=LTnewLM_280027700.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_28 AUGUSTUS gene 813413 813826 1 - . ID=LTnewLM_280027800 LTnewLM_28 AUGUSTUS mRNA 813413 813826 1 - . ID=LTnewLM_280027800.1;Parent=LTnewLM_280027800 LTnewLM_28 AUGUSTUS CDS 813413 813826 1 - 0 ID=LTnewLM_280027800.1:CDS:1;Parent=LTnewLM_280027800.1 ### LTnewLM_28 . polypeptide 813413 813826 . - . ID=LTnewLM_280027800.1:pep;Derives_from=LTnewLM_280027800.1;orthologous_to=LmjF.28.2060_mRNA;ortholog_cluster=OG0003622;product=term%3DRNA polymerase Rpb3/Rpb11 dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13656 LTnewLM_28 Pfam protein_match 813482 813682 . - . Parent=LTnewLM_280027800.1:pep;Name=PF13656;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain ### LTnewLM_28 AUGUSTUS gene 814662 815822 1 - . ID=LTnewLM_280027900 LTnewLM_28 AUGUSTUS mRNA 814662 815822 1 - . ID=LTnewLM_280027900.1;Parent=LTnewLM_280027900 LTnewLM_28 AUGUSTUS CDS 814662 815822 1 - 0 ID=LTnewLM_280027900.1:CDS:1;Parent=LTnewLM_280027900.1 ### LTnewLM_28 . polypeptide 814662 815822 . - . ID=LTnewLM_280027900.1:pep;Derives_from=LTnewLM_280027900.1;orthologous_to=LmjF.28.2070_mRNA;ortholog_cluster=OG0003623;product=term%3DTelomere recombination/Threonylcarbamoyl-AMP synthase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01300|Pfam:PF03481;Ontology_term=GO:0003725 LTnewLM_28 Pfam protein_match 814725 815216 . - . Parent=LTnewLM_280027900.1:pep;Name=PF03481;signature_desc=Threonylcarbamoyl-AMP synthase%2C C-terminal domain LTnewLM_28 Pfam protein_match 815223 815771 . - . Parent=LTnewLM_280027900.1:pep;Name=PF01300;signature_desc=Telomere recombination;Ontology_term=GO:0003725 ### LTnewLM_28 AUGUSTUS gene 817441 819075 1 - . ID=LTnewLM_280028000 LTnewLM_28 AUGUSTUS mRNA 817441 819075 1 - . ID=LTnewLM_280028000.1;Parent=LTnewLM_280028000 LTnewLM_28 AUGUSTUS CDS 817441 819075 1 - 0 ID=LTnewLM_280028000.1:CDS:1;Parent=LTnewLM_280028000.1 ### LTnewLM_28 . polypeptide 817441 819075 . - . ID=LTnewLM_280028000.1:pep;Derives_from=LTnewLM_280028000.1;orthologous_to=LmjF.28.2080_mRNA;ortholog_cluster=OG0003624;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_28 Pfam protein_match 817756 818061 . - . Parent=LTnewLM_280028000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_28 Pfam protein_match 818227 818727 . - . Parent=LTnewLM_280028000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_28 AUGUSTUS gene 819547 821430 1 - . ID=LTnewLM_280028100 LTnewLM_28 AUGUSTUS mRNA 819547 821430 1 - . ID=LTnewLM_280028100.1;Parent=LTnewLM_280028100 LTnewLM_28 AUGUSTUS CDS 819547 821430 1 - 0 ID=LTnewLM_280028100.1:CDS:1;Parent=LTnewLM_280028100.1 ### LTnewLM_28 . polypeptide 819547 821430 . - . ID=LTnewLM_280028100.1:pep;Derives_from=LTnewLM_280028100.1;orthologous_to=LmjF.28.2090_mRNA;ortholog_cluster=OG0003625;product=term%3DCEP76 C2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15627 LTnewLM_28 Pfam protein_match 820723 821151 . - . Parent=LTnewLM_280028100.1:pep;Name=PF15627;signature_desc=CEP76 C2 domain ### LTnewLM_28 AUGUSTUS gene 821692 822120 1 - . ID=LTnewLM_280028200 LTnewLM_28 AUGUSTUS mRNA 821692 822120 1 - . ID=LTnewLM_280028200.1;Parent=LTnewLM_280028200 LTnewLM_28 AUGUSTUS CDS 821692 822120 1 - 0 ID=LTnewLM_280028200.1:CDS:1;Parent=LTnewLM_280028200.1 ### LTnewLM_28 . polypeptide 821692 822120 . - . ID=LTnewLM_280028200.1:pep;Derives_from=LTnewLM_280028200.1;orthologous_to=LmjF.28.2095_mRNA;ortholog_cluster=OG0003626;product=term%3DUncharacterised protein family (UPF0220)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05255 LTnewLM_28 Pfam protein_match 821713 822114 . - . Parent=LTnewLM_280028200.1:pep;Name=PF05255;signature_desc=Uncharacterised protein family (UPF0220) ### LTnewLM_28 AUGUSTUS gene 822409 823458 1 - . ID=LTnewLM_280028300 LTnewLM_28 AUGUSTUS mRNA 822409 823458 1 - . ID=LTnewLM_280028300.1;Parent=LTnewLM_280028300 LTnewLM_28 AUGUSTUS CDS 822409 823458 1 - 0 ID=LTnewLM_280028300.1:CDS:1;Parent=LTnewLM_280028300.1 ### LTnewLM_28 . polypeptide 822409 823458 . - . ID=LTnewLM_280028300.1:pep;Derives_from=LTnewLM_280028300.1;orthologous_to=LmjF.28.2100_mRNA;ortholog_cluster=OG0003627;product=term%3DGlycerophosphoryl diester phosphodiesterase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03009;Ontology_term=GO:0008081,GO:0006629 LTnewLM_28 Pfam protein_match 822928 823317 . - . Parent=LTnewLM_280028300.1:pep;Name=PF03009;signature_desc=Glycerophosphoryl diester phosphodiesterase family;Ontology_term=GO:0008081,GO:0006629 ### LTnewLM_28 AUGUSTUS gene 827844 830150 1 + . ID=LTnewLM_280028400 LTnewLM_28 AUGUSTUS mRNA 827844 830150 1 + . ID=LTnewLM_280028400.1;Parent=LTnewLM_280028400 LTnewLM_28 AUGUSTUS CDS 827844 830150 1 + 0 ID=LTnewLM_280028400.1:CDS:1;Parent=LTnewLM_280028400.1 ### LTnewLM_28 . polypeptide 827844 830150 . + . ID=LTnewLM_280028400.1:pep;Derives_from=LTnewLM_280028400.1;orthologous_to=LmjF.28.2110_mRNA;ortholog_cluster=OG0003628;product=term%3DCullin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_28 Pfam protein_match 828129 829796 . + . Parent=LTnewLM_280028400.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_28 Liftoff gene 830922 833237 . + . ID=LTnewLM_280028500;coverage=1.0;sequence_ID=0.971;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2120_0 LTnewLM_28 Liftoff mRNA 830922 833237 . + . ID=LTnewLM_280028500.1;Parent=LTnewLM_280028500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 830922 833237 . + 0 ID=LTnewLM_280028500.1:CDS:1;Parent=LTnewLM_280028500.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 830922 833237 . + . ID=LTnewLM_280028500.1:pep;Derives_from=LTnewLM_280028500.1;orthologous_to=LmjF.28.2120_mRNA;ortholog_cluster=OG0003629;product=term%3DCullin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_28 Pfam protein_match 831099 832868 . + . Parent=LTnewLM_280028500.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_28 AUGUSTUS gene 836902 837174 1 + . ID=LTnewLM_280028600 LTnewLM_28 AUGUSTUS mRNA 836902 837174 1 + . ID=LTnewLM_280028600.1;Parent=LTnewLM_280028600 LTnewLM_28 AUGUSTUS CDS 836902 837174 1 + 0 ID=LTnewLM_280028600.1:CDS:1;Parent=LTnewLM_280028600.1 ### LTnewLM_28 . polypeptide 836902 837174 . + . ID=LTnewLM_280028600.1:pep;Derives_from=LTnewLM_280028600.1;orthologous_to=LmjF.28.2130_mRNA;ortholog_cluster=OG0003630;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_28 Pfam protein_match 836923 837165 . + . Parent=LTnewLM_280028600.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_28 AUGUSTUS gene 837876 839381 1 + . ID=LTnewLM_280028700 LTnewLM_28 AUGUSTUS mRNA 837876 839381 1 + . ID=LTnewLM_280028700.1;Parent=LTnewLM_280028700 LTnewLM_28 AUGUSTUS CDS 837876 839381 1 + 0 ID=LTnewLM_280028700.1:CDS:1;Parent=LTnewLM_280028700.1 ### LTnewLM_28 . polypeptide 837876 839381 . + . ID=LTnewLM_280028700.1:pep;Derives_from=LTnewLM_280028700.1;orthologous_to=LmjF.28.2140_mRNA;ortholog_cluster=OG0003631;product=term%3DHhH-GPD superfamily base excision DNA repair protein/NUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00730|Pfam:PF14815;Ontology_term=GO:0006284 LTnewLM_28 Pfam protein_match 838128 838511 . + . Parent=LTnewLM_280028700.1:pep;Name=PF00730;signature_desc=HhH-GPD superfamily base excision DNA repair protein;Ontology_term=GO:0006284 LTnewLM_28 Pfam protein_match 838845 839096 . + . Parent=LTnewLM_280028700.1:pep;Name=PF14815;signature_desc=NUDIX domain ### LTnewLM_28 AUGUSTUS gene 839887 842391 1 + . ID=LTnewLM_280028800 LTnewLM_28 AUGUSTUS mRNA 839887 842391 1 + . ID=LTnewLM_280028800.1;Parent=LTnewLM_280028800 LTnewLM_28 AUGUSTUS CDS 839887 842391 1 + 0 ID=LTnewLM_280028800.1:CDS:1;Parent=LTnewLM_280028800.1 ### LTnewLM_28 . polypeptide 839887 842391 . + . ID=LTnewLM_280028800.1:pep;Derives_from=LTnewLM_280028800.1;orthologous_to=LmjF.28.2150_mRNA;ortholog_cluster=OG0003632;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 842866 843597 1 + . ID=LTnewLM_280028900 LTnewLM_28 AUGUSTUS mRNA 842866 843597 1 + . ID=LTnewLM_280028900.1;Parent=LTnewLM_280028900 LTnewLM_28 AUGUSTUS CDS 842866 843597 1 + 0 ID=LTnewLM_280028900.1:CDS:1;Parent=LTnewLM_280028900.1 ### LTnewLM_28 . polypeptide 842866 843597 . + . ID=LTnewLM_280028900.1:pep;Derives_from=LTnewLM_280028900.1;orthologous_to=LmjF.28.2160_mRNA;ortholog_cluster=OG0003633;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_28 Pfam protein_match 843025 843315 . + . Parent=LTnewLM_280028900.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_28 Pfam protein_match 843025 843315 . + . Parent=LTnewLM_280028900.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_28 AUGUSTUS gene 844396 846351 1 + . ID=LTnewLM_280029000 LTnewLM_28 AUGUSTUS mRNA 844396 846351 1 + . ID=LTnewLM_280029000.1;Parent=LTnewLM_280029000 LTnewLM_28 AUGUSTUS CDS 844396 846351 1 + 0 ID=LTnewLM_280029000.1:CDS:1;Parent=LTnewLM_280029000.1 ### LTnewLM_28 . polypeptide 844396 846351 . + . ID=LTnewLM_280029000.1:pep;Derives_from=LTnewLM_280029000.1;orthologous_to=LmjF.28.2170_mRNA;ortholog_cluster=OG0003634;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 847995 848987 1 + . ID=LTnewLM_280029100 LTnewLM_28 AUGUSTUS mRNA 847995 848987 1 + . ID=LTnewLM_280029100.1;Parent=LTnewLM_280029100 LTnewLM_28 AUGUSTUS CDS 847995 848987 1 + 0 ID=LTnewLM_280029100.1:CDS:1;Parent=LTnewLM_280029100.1 ### LTnewLM_28 . polypeptide 847995 848987 . + . ID=LTnewLM_280029100.1:pep;Derives_from=LTnewLM_280029100.1;orthologous_to=LmjF.28.2180_mRNA;ortholog_cluster=OG0003635;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 850457 853195 1 + . ID=LTnewLM_280029200 LTnewLM_28 AUGUSTUS mRNA 850457 853195 1 + . ID=LTnewLM_280029200.1;Parent=LTnewLM_280029200 LTnewLM_28 AUGUSTUS CDS 850457 853195 1 + 0 ID=LTnewLM_280029200.1:CDS:1;Parent=LTnewLM_280029200.1 ### LTnewLM_28 . polypeptide 850457 853195 . + . ID=LTnewLM_280029200.1:pep;Derives_from=LTnewLM_280029200.1;orthologous_to=LmjF.28.2190_mRNA;ortholog_cluster=OG0003636;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 854284 857127 1 + . ID=LTnewLM_280029300 LTnewLM_28 AUGUSTUS mRNA 854284 857127 1 + . ID=LTnewLM_280029300.1;Parent=LTnewLM_280029300 LTnewLM_28 AUGUSTUS CDS 854284 857127 1 + 0 ID=LTnewLM_280029300.1:CDS:1;Parent=LTnewLM_280029300.1 ### LTnewLM_28 . polypeptide 854284 857127 . + . ID=LTnewLM_280029300.1:pep;Derives_from=LTnewLM_280029300.1;orthologous_to=LmjF.28.2200_mRNA;ortholog_cluster=OG0003637;product=term%3DGlycosyl hydrolase family 63 N-terminal domain/Glycosyl hydrolase family 63 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16923|Pfam:PF03200;Ontology_term=GO:0009311,GO:0004573 LTnewLM_28 Pfam protein_match 854626 855138 . + . Parent=LTnewLM_280029300.1:pep;Name=PF16923;signature_desc=Glycosyl hydrolase family 63 N-terminal domain LTnewLM_28 Pfam protein_match 855568 857094 . + . Parent=LTnewLM_280029300.1:pep;Name=PF03200;signature_desc=Glycosyl hydrolase family 63 C-terminal domain;Ontology_term=GO:0004573,GO:0009311 ### LTnewLM_28 Liftoff gene 858386 858559 . + . ID=LTnewLM_280029400;coverage=1.0;sequence_ID=0.988;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2205_0 LTnewLM_28 Liftoff mRNA 858386 858559 . + . ID=LTnewLM_280029400.1;Parent=LTnewLM_280029400;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 858386 858559 . + 0 ID=LTnewLM_280029400.1:CDS:1;Parent=LTnewLM_280029400.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 858386 858559 . + . ID=LTnewLM_280029400.1:pep;Derives_from=LTnewLM_280029400.1;orthologous_to=LTnewLM_280032100.1,LmjF.28.2205_mRNA,LmjF.28.2460_mRNA;ortholog_cluster=OG0000201;product=term%3DRibosomal protein S14p/S29e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00253;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_28 Pfam protein_match 858428 858547 . + . Parent=LTnewLM_280029400.1:pep;Name=PF00253;signature_desc=Ribosomal protein S14p/S29e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_28 AUGUSTUS gene 860834 862669 1 + . ID=LTnewLM_280029500 LTnewLM_28 AUGUSTUS mRNA 860834 862669 1 + . ID=LTnewLM_280029500.1;Parent=LTnewLM_280029500 LTnewLM_28 AUGUSTUS CDS 860834 862669 1 + 0 ID=LTnewLM_280029500.1:CDS:1;Parent=LTnewLM_280029500.1 ### LTnewLM_28 . polypeptide 860834 862669 . + . ID=LTnewLM_280029500.1:pep;Derives_from=LTnewLM_280029500.1;orthologous_to=LmjF.28.2210_mRNA;ortholog_cluster=OG0003638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 865469 867970 1 + . ID=LTnewLM_280029600 LTnewLM_28 AUGUSTUS mRNA 865469 867970 1 + . ID=LTnewLM_280029600.1;Parent=LTnewLM_280029600 LTnewLM_28 AUGUSTUS CDS 865469 867970 1 + 0 ID=LTnewLM_280029600.1:CDS:1;Parent=LTnewLM_280029600.1 ### LTnewLM_28 . polypeptide 865469 867970 . + . ID=LTnewLM_280029600.1:pep;Derives_from=LTnewLM_280029600.1;orthologous_to=LmjF.28.2220_mRNA;ortholog_cluster=OG0003639;product=term%3DGamma-glutamyl cyclotransferase%2C AIG2-like/Metalloenzyme superfamily/2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06094|Pfam:PF01676|Pfam:PF10143;Ontology_term=GO:0003824,GO:0046872 LTnewLM_28 Pfam protein_match 865490 865792 . + . Parent=LTnewLM_280029600.1:pep;Name=PF06094;signature_desc=Gamma-glutamyl cyclotransferase%2C AIG2-like LTnewLM_28 Pfam protein_match 866240 867820 . + . Parent=LTnewLM_280029600.1:pep;Name=PF01676;signature_desc=Metalloenzyme superfamily;Ontology_term=GO:0003824,GO:0046872 LTnewLM_28 Pfam protein_match 866483 867151 . + . Parent=LTnewLM_280029600.1:pep;Name=PF10143;signature_desc=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;Ontology_term=GO:0003824,GO:0046872 ### LTnewLM_28 AUGUSTUS gene 869699 872464 1 + . ID=LTnewLM_280029700 LTnewLM_28 AUGUSTUS mRNA 869699 872464 1 + . ID=LTnewLM_280029700.1;Parent=LTnewLM_280029700 LTnewLM_28 AUGUSTUS CDS 869699 872464 1 + 0 ID=LTnewLM_280029700.1:CDS:1;Parent=LTnewLM_280029700.1 ### LTnewLM_28 . polypeptide 869699 872464 . + . ID=LTnewLM_280029700.1:pep;Derives_from=LTnewLM_280029700.1;orthologous_to=LmjF.28.2230_mRNA;ortholog_cluster=OG0003640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 873692 874810 1 + . ID=LTnewLM_280029800 LTnewLM_28 AUGUSTUS mRNA 873692 874810 1 + . ID=LTnewLM_280029800.1;Parent=LTnewLM_280029800 LTnewLM_28 AUGUSTUS CDS 873692 874810 1 + 0 ID=LTnewLM_280029800.1:CDS:1;Parent=LTnewLM_280029800.1 ### LTnewLM_28 . polypeptide 873692 874810 . + . ID=LTnewLM_280029800.1:pep;Derives_from=LTnewLM_280029800.1;orthologous_to=LmjF.28.2240_mRNA;ortholog_cluster=OG0003641;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 877940 878605 1 + . ID=LTnewLM_280029900 LTnewLM_28 AUGUSTUS mRNA 877940 878605 1 + . ID=LTnewLM_280029900.1;Parent=LTnewLM_280029900 LTnewLM_28 AUGUSTUS CDS 877940 878605 1 + 0 ID=LTnewLM_280029900.1:CDS:1;Parent=LTnewLM_280029900.1 ### LTnewLM_28 . polypeptide 877940 878605 . + . ID=LTnewLM_280029900.1:pep;Derives_from=LTnewLM_280029900.1;orthologous_to=LmjF.28.2250_mRNA;ortholog_cluster=OG0003642;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 879498 880166 1 + . ID=LTnewLM_280030000 LTnewLM_28 AUGUSTUS mRNA 879498 880166 1 + . ID=LTnewLM_280030000.1;Parent=LTnewLM_280030000 LTnewLM_28 AUGUSTUS CDS 879498 880166 1 + 0 ID=LTnewLM_280030000.1:CDS:1;Parent=LTnewLM_280030000.1 ### LTnewLM_28 . polypeptide 879498 880166 . + . ID=LTnewLM_280030000.1:pep;Derives_from=LTnewLM_280030000.1;orthologous_to=LmjF.28.2260_mRNA;ortholog_cluster=OG0003643;product=term%3DPeroxisomal biogenesis factor 11 (PEX11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05648;Ontology_term=GO:0016559,GO:0005779 LTnewLM_28 Pfam protein_match 879510 880148 . + . Parent=LTnewLM_280030000.1:pep;Name=PF05648;signature_desc=Peroxisomal biogenesis factor 11 (PEX11);Ontology_term=GO:0016559,GO:0005779 ### LTnewLM_28 AUGUSTUS gene 883456 885750 1 + . ID=LTnewLM_280030100 LTnewLM_28 AUGUSTUS mRNA 883456 885750 1 + . ID=LTnewLM_280030100.1;Parent=LTnewLM_280030100 LTnewLM_28 AUGUSTUS CDS 883456 885750 1 + 0 ID=LTnewLM_280030100.1:CDS:1;Parent=LTnewLM_280030100.1 ### LTnewLM_28 . polypeptide 883456 885750 . + . ID=LTnewLM_280030100.1:pep;Derives_from=LTnewLM_280030100.1;orthologous_to=LmjF.28.2270_mRNA;ortholog_cluster=OG0003644;product=term%3DMOZ/SAS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01853;Ontology_term=GO:0016747,GO:0005634,GO:0006355 LTnewLM_28 Pfam protein_match 884482 884784 . + . Parent=LTnewLM_280030100.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 LTnewLM_28 Pfam protein_match 884848 885009 . + . Parent=LTnewLM_280030100.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 ### LTnewLM_28 AUGUSTUS gene 886824 891317 1 + . ID=LTnewLM_280030200 LTnewLM_28 AUGUSTUS mRNA 886824 891317 1 + . ID=LTnewLM_280030200.1;Parent=LTnewLM_280030200 LTnewLM_28 AUGUSTUS CDS 886824 891317 1 + 0 ID=LTnewLM_280030200.1:CDS:1;Parent=LTnewLM_280030200.1 ### LTnewLM_28 . polypeptide 886824 891317 . + . ID=LTnewLM_280030200.1:pep;Derives_from=LTnewLM_280030200.1;orthologous_to=LmjF.28.2280_mRNA;ortholog_cluster=OG0003645;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/DNA gyrase B/C-terminal associated domain of TOPRIM/DNA gyrase/topoisomerase IV%2C subunit A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02518|Pfam:PF00204|Pfam:PF16898|Pfam:PF00521;Ontology_term=GO:0003918,GO:0005524,GO:0006265,GO:0003677 LTnewLM_28 Pfam protein_match 886986 887297 . + . Parent=LTnewLM_280030200.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_28 Pfam protein_match 887616 887894 . + . Parent=LTnewLM_280030200.1:pep;Name=PF00204;signature_desc=DNA gyrase B;Ontology_term=GO:0003677,GO:0003918,GO:0005524,GO:0006265 LTnewLM_28 Pfam protein_match 888444 888851 . + . Parent=LTnewLM_280030200.1:pep;Name=PF16898;signature_desc=C-terminal associated domain of TOPRIM LTnewLM_28 Pfam protein_match 888858 890276 . + . Parent=LTnewLM_280030200.1:pep;Name=PF00521;signature_desc=DNA gyrase/topoisomerase IV%2C subunit A;Ontology_term=GO:0003677,GO:0003918,GO:0005524,GO:0006265 ### LTnewLM_28 AUGUSTUS gene 892161 894671 1 + . ID=LTnewLM_280030300 LTnewLM_28 AUGUSTUS mRNA 892161 894671 1 + . ID=LTnewLM_280030300.1;Parent=LTnewLM_280030300 LTnewLM_28 AUGUSTUS CDS 892161 894671 1 + 0 ID=LTnewLM_280030300.1:CDS:1;Parent=LTnewLM_280030300.1 ### LTnewLM_28 . polypeptide 892161 894671 . + . ID=LTnewLM_280030300.1:pep;Derives_from=LTnewLM_280030300.1;orthologous_to=LmjF.28.2290_mRNA;ortholog_cluster=OG0003646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 895935 897872 1 + . ID=LTnewLM_280030400 LTnewLM_28 AUGUSTUS mRNA 895935 897872 1 + . ID=LTnewLM_280030400.1;Parent=LTnewLM_280030400 LTnewLM_28 AUGUSTUS CDS 895935 897872 1 + 0 ID=LTnewLM_280030400.1:CDS:1;Parent=LTnewLM_280030400.1 ### LTnewLM_28 . polypeptide 895935 897872 . + . ID=LTnewLM_280030400.1:pep;Derives_from=LTnewLM_280030400.1;orthologous_to=LmjF.28.2300_mRNA;ortholog_cluster=OG0003647;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 898968 900185 1 + . ID=LTnewLM_280030500 LTnewLM_28 AUGUSTUS mRNA 898968 900185 1 + . ID=LTnewLM_280030500.1;Parent=LTnewLM_280030500 LTnewLM_28 AUGUSTUS CDS 898968 900185 1 + 0 ID=LTnewLM_280030500.1:CDS:1;Parent=LTnewLM_280030500.1 ### LTnewLM_28 . polypeptide 898968 900185 . + . ID=LTnewLM_280030500.1:pep;Derives_from=LTnewLM_280030500.1;orthologous_to=LmjF.28.2310_mRNA;ortholog_cluster=OG0003648;product=term%3DeIF3 subunit 6 N terminal domain/PCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09440|Pfam:PF01399;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 898971 899336 . + . Parent=LTnewLM_280030500.1:pep;Name=PF09440;signature_desc=eIF3 subunit 6 N terminal domain LTnewLM_28 Pfam protein_match 899814 900122 . + . Parent=LTnewLM_280030500.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 903436 906150 1 + . ID=LTnewLM_280030600 LTnewLM_28 AUGUSTUS mRNA 903436 906150 1 + . ID=LTnewLM_280030600.1;Parent=LTnewLM_280030600 LTnewLM_28 AUGUSTUS CDS 903436 906150 1 + 0 ID=LTnewLM_280030600.1:CDS:1;Parent=LTnewLM_280030600.1 ### LTnewLM_28 . polypeptide 903436 906150 . + . ID=LTnewLM_280030600.1:pep;Derives_from=LTnewLM_280030600.1;orthologous_to=LmjF.28.2320_mRNA;ortholog_cluster=OG0003649;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 907203 909408 3.83e+03 + . ID=LTnewLM_280030700:pseudogene;has_internal_stop=true;has_frameshift=true;has_stop=true;Target=LmjF.28.2330:mRNA 1 746;original_prot_length=746 LTnewLM_28 . pseudogenic_transcript 907203 909408 . + . ID=LTnewLM_280030700.1;Parent=LTnewLM_280030700:pseudogene LTnewLM_28 . pseudogenic_exon 907203 907328 . + . ID=LTnewLM_280030700.1:pseudogenic_exon:1;Parent=LTnewLM_280030700.1 LTnewLM_28 . pseudogenic_exon 907330 909408 . + . ID=LTnewLM_280030700.1:pseudogenic_exon:2;Parent=LTnewLM_280030700.1 ### LTnewLM_28 . polypeptide 907203 909408 . + . ID=LTnewLM_280030700.1:pep;Derives_from=LTnewLM_280030700.1;orthologous_to=LmjF.28.2330_mRNA;ortholog_cluster=OG0007573;product=term%3DCactus-binding C-terminus of cactin protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09732;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 909030 909401 . + . Parent=LTnewLM_280030700.1:pep;Name=PF09732;signature_desc=Cactus-binding C-terminus of cactin protein;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 910216 911073 1 + . ID=LTnewLM_280030800 LTnewLM_28 AUGUSTUS mRNA 910216 911073 1 + . ID=LTnewLM_280030800.1;Parent=LTnewLM_280030800 LTnewLM_28 AUGUSTUS CDS 910216 911073 1 + 0 ID=LTnewLM_280030800.1:CDS:1;Parent=LTnewLM_280030800.1 ### LTnewLM_28 . polypeptide 910216 911073 . + . ID=LTnewLM_280030800.1:pep;Derives_from=LTnewLM_280030800.1;orthologous_to=LmjF.28.2350_mRNA;ortholog_cluster=OG0003650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 912285 913019 1 + . ID=LTnewLM_280030900 LTnewLM_28 AUGUSTUS mRNA 912285 913019 1 + . ID=LTnewLM_280030900.1;Parent=LTnewLM_280030900 LTnewLM_28 AUGUSTUS CDS 912285 913019 1 + 0 ID=LTnewLM_280030900.1:CDS:1;Parent=LTnewLM_280030900.1 ### LTnewLM_28 . polypeptide 912285 913019 . + . ID=LTnewLM_280030900.1:pep;Derives_from=LTnewLM_280030900.1;orthologous_to=LmjF.28.2360_mRNA;ortholog_cluster=OG0003651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 915329 916771 1 + . ID=LTnewLM_280031000 LTnewLM_28 AUGUSTUS mRNA 915329 916771 1 + . ID=LTnewLM_280031000.1;Parent=LTnewLM_280031000 LTnewLM_28 AUGUSTUS CDS 915329 916771 1 + 0 ID=LTnewLM_280031000.1:CDS:1;Parent=LTnewLM_280031000.1 ### LTnewLM_28 . polypeptide 915329 916771 . + . ID=LTnewLM_280031000.1:pep;Derives_from=LTnewLM_280031000.1;orthologous_to=LmjF.28.2370_mRNA;ortholog_cluster=OG0003652;product=term%3DSerine hydroxymethyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00464;Ontology_term=GO:0006544,GO:0006563,GO:0004372 LTnewLM_28 Pfam protein_match 915416 916588 . + . Parent=LTnewLM_280031000.1:pep;Name=PF00464;signature_desc=Serine hydroxymethyltransferase;Ontology_term=GO:0004372,GO:0006544,GO:0006563 ### LTnewLM_28 AUGUSTUS gene 918609 923813 1 + . ID=LTnewLM_280031100 LTnewLM_28 AUGUSTUS mRNA 918609 923813 1 + . ID=LTnewLM_280031100.1;Parent=LTnewLM_280031100 LTnewLM_28 AUGUSTUS CDS 918609 923813 1 + 0 ID=LTnewLM_280031100.1:CDS:1;Parent=LTnewLM_280031100.1 ### LTnewLM_28 . polypeptide 918609 923813 . + . ID=LTnewLM_280031100.1:pep;Derives_from=LTnewLM_280031100.1;orthologous_to=LmjF.28.2380_mRNA;ortholog_cluster=OG0003653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 926816 929458 1 + . ID=LTnewLM_280031200 LTnewLM_28 AUGUSTUS mRNA 926816 929458 1 + . ID=LTnewLM_280031200.1;Parent=LTnewLM_280031200 LTnewLM_28 AUGUSTUS CDS 926816 929458 1 + 0 ID=LTnewLM_280031200.1:CDS:1;Parent=LTnewLM_280031200.1 ### LTnewLM_28 . polypeptide 926816 929458 . + . ID=LTnewLM_280031200.1:pep;Derives_from=LTnewLM_280031200.1;orthologous_to=LmjF.28.2385_mRNA;ortholog_cluster=OG0003654;product=term%3DMCM OB domain/MCM P-loop domain/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain/MCM6 C-terminal winged-helix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17207|Pfam:PF00493|Pfam:PF01078|Pfam:PF17855|Pfam:PF18263;Ontology_term=GO:0015995,GO:0005524,GO:0015979,GO:0006260,GO:0016851,GO:0003677 LTnewLM_28 Pfam protein_match 927284 927673 . + . Parent=LTnewLM_280031200.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_28 Pfam protein_match 927956 928615 . + . Parent=LTnewLM_280031200.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_28 Pfam protein_match 928268 928471 . + . Parent=LTnewLM_280031200.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_28 Pfam protein_match 928664 928915 . + . Parent=LTnewLM_280031200.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain LTnewLM_28 Pfam protein_match 929168 929395 . + . Parent=LTnewLM_280031200.1:pep;Name=PF18263;signature_desc=MCM6 C-terminal winged-helix domain ### LTnewLM_28 AUGUSTUS gene 930840 934913 1 + . ID=LTnewLM_280031300 LTnewLM_28 AUGUSTUS mRNA 930840 934913 1 + . ID=LTnewLM_280031300.1;Parent=LTnewLM_280031300 LTnewLM_28 AUGUSTUS CDS 930840 934913 1 + 0 ID=LTnewLM_280031300.1:CDS:1;Parent=LTnewLM_280031300.1 ### LTnewLM_28 . polypeptide 930840 934913 . + . ID=LTnewLM_280031300.1:pep;Derives_from=LTnewLM_280031300.1;orthologous_to=LmjF.28.2390_mRNA;ortholog_cluster=OG0003655;product=term%3DWW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 931068 931154 . + . Parent=LTnewLM_280031300.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 935857 936920 0.47 + . ID=LTnewLM_280031400 LTnewLM_28 AUGUSTUS mRNA 935857 936920 0.47 + . ID=LTnewLM_280031400.1;Parent=LTnewLM_280031400 LTnewLM_28 AUGUSTUS CDS 935857 936723 0.72 + 0 ID=LTnewLM_280031400.1:CDS:1;Parent=LTnewLM_280031400.1 LTnewLM_28 AUGUSTUS CDS 936780 936920 0.49 + 0 ID=LTnewLM_280031400.1:CDS:2;Parent=LTnewLM_280031400.1 ### LTnewLM_28 . polypeptide 935857 936920 . + . ID=LTnewLM_280031400.1:pep;Derives_from=LTnewLM_280031400.1;orthologous_to=LmjF.28.2400_mRNA;ortholog_cluster=OG0003656;product=term%3DtRNA methyltransferase complex GCD14 subunit/Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08704|Pfam:PF01135|Pfam:PF13847;Ontology_term=GO:0004719,GO:0006464,GO:0031515,GO:0030488,GO:0016429 LTnewLM_28 Pfam protein_match 936121 936468 . + . Parent=LTnewLM_280031400.1:pep;Name=PF08704;signature_desc=tRNA methyltransferase complex GCD14 subunit;Ontology_term=GO:0016429,GO:0030488,GO:0031515 LTnewLM_28 Pfam protein_match 936202 936399 . + . Parent=LTnewLM_280031400.1:pep;Name=PF01135;signature_desc=Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);Ontology_term=GO:0004719,GO:0006464 LTnewLM_28 Pfam protein_match 936235 936654 . + . Parent=LTnewLM_280031400.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_28 Pfam protein_match 936499 936741 . + . Parent=LTnewLM_280031400.1:pep;Name=PF08704;signature_desc=tRNA methyltransferase complex GCD14 subunit;Ontology_term=GO:0016429,GO:0030488,GO:0031515 ### LTnewLM_28 AUGUSTUS gene 937735 939924 1 + . ID=LTnewLM_280031500 LTnewLM_28 AUGUSTUS mRNA 937735 939924 1 + . ID=LTnewLM_280031500.1;Parent=LTnewLM_280031500 LTnewLM_28 AUGUSTUS CDS 937735 939924 1 + 0 ID=LTnewLM_280031500.1:CDS:1;Parent=LTnewLM_280031500.1 ### LTnewLM_28 . polypeptide 937735 939924 . + . ID=LTnewLM_280031500.1:pep;Derives_from=LTnewLM_280031500.1;orthologous_to=LmjF.28.2410_mRNA;ortholog_cluster=OG0003657;product=term%3DRft protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04506;Ontology_term=GO:0005319,GO:0006869,GO:0016021 LTnewLM_28 Pfam protein_match 938344 939513 . + . Parent=LTnewLM_280031500.1:pep;Name=PF04506;signature_desc=Rft protein;Ontology_term=GO:0005319,GO:0006869,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 941390 942559 1 + . ID=LTnewLM_280031600 LTnewLM_28 AUGUSTUS mRNA 941390 942559 1 + . ID=LTnewLM_280031600.1;Parent=LTnewLM_280031600 LTnewLM_28 AUGUSTUS CDS 941390 942559 1 + 0 ID=LTnewLM_280031600.1:CDS:1;Parent=LTnewLM_280031600.1 ### LTnewLM_28 . polypeptide 941390 942559 . + . ID=LTnewLM_280031600.1:pep;Derives_from=LTnewLM_280031600.1;orthologous_to=LmjF.28.2420_mRNA;ortholog_cluster=OG0003658;product=term%3DBiotin-requiring enzyme/2-oxoacid dehydrogenases acyltransferase (catalytic domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00364|Pfam:PF00198;Ontology_term=GO:0016746,GO:0008152 LTnewLM_28 Pfam protein_match 941471 941677 . + . Parent=LTnewLM_280031600.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_28 Pfam protein_match 941861 942541 . + . Parent=LTnewLM_280031600.1:pep;Name=PF00198;signature_desc=2-oxoacid dehydrogenases acyltransferase (catalytic domain);Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_28 AUGUSTUS gene 945457 946944 1 + . ID=LTnewLM_280031700 LTnewLM_28 AUGUSTUS mRNA 945457 946944 1 + . ID=LTnewLM_280031700.1;Parent=LTnewLM_280031700 LTnewLM_28 AUGUSTUS CDS 945457 946944 1 + 0 ID=LTnewLM_280031700.1:CDS:1;Parent=LTnewLM_280031700.1 ### LTnewLM_28 . polypeptide 945457 946944 . + . ID=LTnewLM_280031700.1:pep;Derives_from=LTnewLM_280031700.1;orthologous_to=LmjF.28.2430_mRNA;ortholog_cluster=OG0003659;product=term%3DATP synthase alpha/beta family%2C beta-barrel domain/ATP synthase alpha/beta family%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02874|Pfam:PF00006;Ontology_term=GO:0046034,GO:0005524,GO:0015992 LTnewLM_28 Pfam protein_match 945574 945768 . + . Parent=LTnewLM_280031700.1:pep;Name=PF02874;signature_desc=ATP synthase alpha/beta family%2C beta-barrel domain;Ontology_term=GO:0015992,GO:0046034 LTnewLM_28 Pfam protein_match 945940 946602 . + . Parent=LTnewLM_280031700.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 ### LTnewLM_28 AUGUSTUS gene 949379 951400 1 + . ID=LTnewLM_280031800 LTnewLM_28 AUGUSTUS mRNA 949379 951400 1 + . ID=LTnewLM_280031800.1;Parent=LTnewLM_280031800 LTnewLM_28 AUGUSTUS CDS 949379 951400 1 + 0 ID=LTnewLM_280031800.1:CDS:1;Parent=LTnewLM_280031800.1 ### LTnewLM_28 . polypeptide 949379 951400 . + . ID=LTnewLM_280031800.1:pep;Derives_from=LTnewLM_280031800.1;orthologous_to=LmjF.28.2440_mRNA;ortholog_cluster=OG0003660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 952342 953787 1 + . ID=LTnewLM_280031900 LTnewLM_28 AUGUSTUS mRNA 952342 953787 1 + . ID=LTnewLM_280031900.1;Parent=LTnewLM_280031900 LTnewLM_28 AUGUSTUS CDS 952342 953787 1 + 0 ID=LTnewLM_280031900.1:CDS:1;Parent=LTnewLM_280031900.1 ### LTnewLM_28 . polypeptide 952342 953787 . + . ID=LTnewLM_280031900.1:pep;Derives_from=LTnewLM_280031900.1;orthologous_to=LmjF.28.2445_mRNA;ortholog_cluster=OG0003661;product=term%3DPutative serine esterase (DUF676)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05057 LTnewLM_28 Pfam protein_match 952759 953103 . + . Parent=LTnewLM_280031900.1:pep;Name=PF05057;signature_desc=Putative serine esterase (DUF676) ### LTnewLM_28 AUGUSTUS gene 955275 957689 1 + . ID=LTnewLM_280032000 LTnewLM_28 AUGUSTUS mRNA 955275 957689 1 + . ID=LTnewLM_280032000.1;Parent=LTnewLM_280032000 LTnewLM_28 AUGUSTUS CDS 955275 957689 1 + 0 ID=LTnewLM_280032000.1:CDS:1;Parent=LTnewLM_280032000.1 ### LTnewLM_28 . polypeptide 955275 957689 . + . ID=LTnewLM_280032000.1:pep;Derives_from=LTnewLM_280032000.1;orthologous_to=LmjF.28.2450_mRNA;ortholog_cluster=OG0003662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 Liftoff gene 958374 958547 . + . ID=LTnewLM_280032100;coverage=1.0;sequence_ID=0.988;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2460_0 LTnewLM_28 Liftoff mRNA 958374 958547 . + . ID=LTnewLM_280032100.1;Parent=LTnewLM_280032100;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 958374 958547 . + 0 ID=LTnewLM_280032100.1:CDS:1;Parent=LTnewLM_280032100.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 958374 958547 . + . ID=LTnewLM_280032100.1:pep;Derives_from=LTnewLM_280032100.1;orthologous_to=LTnewLM_280029400.1,LmjF.28.2205_mRNA,LmjF.28.2460_mRNA;ortholog_cluster=OG0000201;product=term%3DRibosomal protein S14p/S29e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00253;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_28 Pfam protein_match 958416 958535 . + . Parent=LTnewLM_280032100.1:pep;Name=PF00253;signature_desc=Ribosomal protein S14p/S29e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_28 AUGUSTUS gene 960225 961103 1 + . ID=LTnewLM_280032200 LTnewLM_28 AUGUSTUS mRNA 960225 961103 1 + . ID=LTnewLM_280032200.1;Parent=LTnewLM_280032200 LTnewLM_28 AUGUSTUS CDS 960225 961103 1 + 0 ID=LTnewLM_280032200.1:CDS:1;Parent=LTnewLM_280032200.1 ### LTnewLM_28 . polypeptide 960225 961103 . + . ID=LTnewLM_280032200.1:pep;Derives_from=LTnewLM_280032200.1;orthologous_to=LmjF.28.2470_mRNA;ortholog_cluster=OG0003663;product=term%3DNUBPL iron-transfer P-loop NTPase/AAA domain/ATPase MipZ/CobQ/CobB/MinD/ParA nucleotide binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10609|Pfam:PF13614|Pfam:PF09140|Pfam:PF01656 LTnewLM_28 Pfam protein_match 960255 960995 . + . Parent=LTnewLM_280032200.1:pep;Name=PF10609;signature_desc=NUBPL iron-transfer P-loop NTPase LTnewLM_28 Pfam protein_match 960261 960686 . + . Parent=LTnewLM_280032200.1:pep;Name=PF13614;signature_desc=AAA domain LTnewLM_28 Pfam protein_match 960264 960755 . + . Parent=LTnewLM_280032200.1:pep;Name=PF09140;signature_desc=ATPase MipZ LTnewLM_28 Pfam protein_match 960267 960923 . + . Parent=LTnewLM_280032200.1:pep;Name=PF01656;signature_desc=CobQ/CobB/MinD/ParA nucleotide binding domain ### LTnewLM_28 AUGUSTUS gene 961817 962722 1 + . ID=LTnewLM_280032300 LTnewLM_28 AUGUSTUS mRNA 961817 962722 1 + . ID=LTnewLM_280032300.1;Parent=LTnewLM_280032300 LTnewLM_28 AUGUSTUS CDS 961817 962722 1 + 0 ID=LTnewLM_280032300.1:CDS:1;Parent=LTnewLM_280032300.1 ### LTnewLM_28 . polypeptide 961817 962722 . + . ID=LTnewLM_280032300.1:pep;Derives_from=LTnewLM_280032300.1;orthologous_to=LmjF.28.2480_mRNA;ortholog_cluster=OG0003664;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 964419 965963 1 + . ID=LTnewLM_280032400 LTnewLM_28 AUGUSTUS mRNA 964419 965963 1 + . ID=LTnewLM_280032400.1;Parent=LTnewLM_280032400 LTnewLM_28 AUGUSTUS CDS 964419 965963 1 + 0 ID=LTnewLM_280032400.1:CDS:1;Parent=LTnewLM_280032400.1 ### LTnewLM_28 . polypeptide 964419 965963 . + . ID=LTnewLM_280032400.1:pep;Derives_from=LTnewLM_280032400.1;orthologous_to=LmjF.28.2490_mRNA;ortholog_cluster=OG0003665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 966885 967934 1 + . ID=LTnewLM_280032500 LTnewLM_28 AUGUSTUS mRNA 966885 967934 1 + . ID=LTnewLM_280032500.1;Parent=LTnewLM_280032500 LTnewLM_28 AUGUSTUS CDS 966885 967934 1 + 0 ID=LTnewLM_280032500.1:CDS:1;Parent=LTnewLM_280032500.1 ### LTnewLM_28 . polypeptide 966885 967934 . + . ID=LTnewLM_280032500.1:pep;Derives_from=LTnewLM_280032500.1;orthologous_to=LmjF.28.2500_mRNA;ortholog_cluster=OG0003666;product=term%3DEukaryotic initiation factor 4E%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01652;Ontology_term=GO:0003723,GO:0005737,GO:0006413,GO:0003743 LTnewLM_28 Pfam protein_match 967308 967841 . + . Parent=LTnewLM_280032500.1:pep;Name=PF01652;signature_desc=Eukaryotic initiation factor 4E;Ontology_term=GO:0003723,GO:0003743,GO:0006413,GO:0005737 ### LTnewLM_28 AUGUSTUS gene 971826 973715 1 + . ID=LTnewLM_280032600 LTnewLM_28 AUGUSTUS mRNA 971826 973715 1 + . ID=LTnewLM_280032600.1;Parent=LTnewLM_280032600 LTnewLM_28 AUGUSTUS CDS 971826 973715 1 + 0 ID=LTnewLM_280032600.1:CDS:1;Parent=LTnewLM_280032600.1 ### LTnewLM_28 . polypeptide 971826 973715 . + . ID=LTnewLM_280032600.1:pep;Derives_from=LTnewLM_280032600.1;orthologous_to=LmjF.28.2510_mRNA;ortholog_cluster=OG0003667;product=term%3DAcyl-CoA dehydrogenase%2C N-terminal domain/Acyl-CoA dehydrogenase%2C middle domain/Acyl-CoA dehydrogenase%2C C-terminal domain/Acetyl-CoA dehydrogenase C-terminal like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02771|Pfam:PF02770|Pfam:PF00441|Pfam:PF08028|Pfam:PF12806;Ontology_term=GO:0008152,GO:0055114,GO:0003995,GO:0050660,GO:0016627 LTnewLM_28 Pfam protein_match 972147 972380 . + . Parent=LTnewLM_280032600.1:pep;Name=PF02771;signature_desc=Acyl-CoA dehydrogenase%2C N-terminal domain;Ontology_term=GO:0016627,GO:0050660,GO:0008152,GO:0055114 LTnewLM_28 Pfam protein_match 972396 972725 . + . Parent=LTnewLM_280032600.1:pep;Name=PF02770;signature_desc=Acyl-CoA dehydrogenase%2C middle domain;Ontology_term=GO:0003995,GO:0055114 LTnewLM_28 Pfam protein_match 972759 973271 . + . Parent=LTnewLM_280032600.1:pep;Name=PF00441;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016627,GO:0055114 LTnewLM_28 Pfam protein_match 973032 973238 . + . Parent=LTnewLM_280032600.1:pep;Name=PF08028;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain LTnewLM_28 Pfam protein_match 973347 973673 . + . Parent=LTnewLM_280032600.1:pep;Name=PF12806;signature_desc=Acetyl-CoA dehydrogenase C-terminal like ### LTnewLM_28 AUGUSTUS gene 976447 978369 1 + . ID=LTnewLM_280032700 LTnewLM_28 AUGUSTUS mRNA 976447 978369 1 + . ID=LTnewLM_280032700.1;Parent=LTnewLM_280032700 LTnewLM_28 AUGUSTUS CDS 976447 978369 1 + 0 ID=LTnewLM_280032700.1:CDS:1;Parent=LTnewLM_280032700.1 ### LTnewLM_28 . polypeptide 976447 978369 . + . ID=LTnewLM_280032700.1:pep;Derives_from=LTnewLM_280032700.1;orthologous_to=LmjF.28.2520_mRNA;ortholog_cluster=OG0003668;product=term%3DR3H domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01424;Ontology_term=GO:0003676 LTnewLM_28 Pfam protein_match 976729 976905 . + . Parent=LTnewLM_280032700.1:pep;Name=PF01424;signature_desc=R3H domain;Ontology_term=GO:0003676 ### LTnewLM_28 Liftoff gene 979940 983239 . + . ID=LTnewLM_280032800;coverage=0.999;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2530_0 LTnewLM_28 Liftoff mRNA 979940 983239 . + . ID=LTnewLM_280032800.1;Parent=LTnewLM_280032800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 979940 983239 . + 0 ID=LTnewLM_280032800.1:CDS:1;Parent=LTnewLM_280032800.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 979940 983239 . + . ID=LTnewLM_280032800.1:pep;Derives_from=LTnewLM_280032800.1;orthologous_to=LTnewLM_320022200.1,LmjF.28.2530_mRNA;ortholog_cluster=OG0000421;product=term%3DAAA domain/PIF1-like helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13604|Pfam:PF05970|Pfam:PF13245;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_28 Pfam protein_match 981269 981829 . + . Parent=LTnewLM_280032800.1:pep;Name=PF13604;signature_desc=AAA domain LTnewLM_28 Pfam protein_match 981272 981766 . + . Parent=LTnewLM_280032800.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_28 Pfam protein_match 981284 981670 . + . Parent=LTnewLM_280032800.1:pep;Name=PF13245;signature_desc=AAA domain ### LTnewLM_28 AUGUSTUS gene 984612 989282 1 + . ID=LTnewLM_280032900 LTnewLM_28 AUGUSTUS mRNA 984612 989282 1 + . ID=LTnewLM_280032900.1;Parent=LTnewLM_280032900 LTnewLM_28 AUGUSTUS CDS 984612 989282 1 + 0 ID=LTnewLM_280032900.1:CDS:1;Parent=LTnewLM_280032900.1 ### LTnewLM_28 . polypeptide 984612 989282 . + . ID=LTnewLM_280032900.1:pep;Derives_from=LTnewLM_280032900.1;orthologous_to=LmjF.28.2540_mRNA;ortholog_cluster=OG0003669;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 990818 993829 1 + . ID=LTnewLM_280033000 LTnewLM_28 AUGUSTUS mRNA 990818 993829 1 + . ID=LTnewLM_280033000.1;Parent=LTnewLM_280033000 LTnewLM_28 AUGUSTUS CDS 990818 993829 1 + 0 ID=LTnewLM_280033000.1:CDS:1;Parent=LTnewLM_280033000.1 ### LTnewLM_28 . polypeptide 990818 993829 . + . ID=LTnewLM_280033000.1:pep;Derives_from=LTnewLM_280033000.1;orthologous_to=LmjF.28.2550_mRNA;ortholog_cluster=OG0003670;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 994574 995005 1 + . ID=LTnewLM_280033100 LTnewLM_28 AUGUSTUS mRNA 994574 995005 1 + . ID=LTnewLM_280033100.1;Parent=LTnewLM_280033100 LTnewLM_28 AUGUSTUS CDS 994574 995005 1 + 0 ID=LTnewLM_280033100.1:CDS:1;Parent=LTnewLM_280033100.1 ### LTnewLM_28 . polypeptide 994574 995005 . + . ID=LTnewLM_280033100.1:pep;Derives_from=LTnewLM_280033100.1;orthologous_to=LTnewLM_280033200.1,LmjF.28.2555_mRNA,LmjF.28.2560_mRNA;ortholog_cluster=OG0000202;product=term%3DRibosomal S17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00833;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_28 Pfam protein_match 994574 994930 . + . Parent=LTnewLM_280033100.1:pep;Name=PF00833;signature_desc=Ribosomal S17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_28 AUGUSTUS gene 996133 996564 1 + . ID=LTnewLM_280033200 LTnewLM_28 AUGUSTUS mRNA 996133 996564 1 + . ID=LTnewLM_280033200.1;Parent=LTnewLM_280033200 LTnewLM_28 AUGUSTUS CDS 996133 996564 1 + 0 ID=LTnewLM_280033200.1:CDS:1;Parent=LTnewLM_280033200.1 ### LTnewLM_28 . polypeptide 996133 996564 . + . ID=LTnewLM_280033200.1:pep;Derives_from=LTnewLM_280033200.1;orthologous_to=LTnewLM_280033100.1,LmjF.28.2555_mRNA,LmjF.28.2560_mRNA;ortholog_cluster=OG0000202;product=term%3DRibosomal S17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00833;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_28 Pfam protein_match 996133 996489 . + . Parent=LTnewLM_280033200.1:pep;Name=PF00833;signature_desc=Ribosomal S17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_28 . pseudogene 997512 998304 . + . ID=LTnewLM_280033300:pseudogene;coverage=0.997;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.2565_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 997512 998304 . + . ID=LTnewLM_280033300.1;Parent=LTnewLM_280033300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 997512 998304 . + . ID=LTnewLM_280033300.1:pseudogenic_exon:1;Parent=LTnewLM_280033300.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 997512 998304 . + . ID=LTnewLM_280033300.1:pep;Derives_from=LTnewLM_280033300.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 999037 1002432 1 + . ID=LTnewLM_280033400 LTnewLM_28 AUGUSTUS mRNA 999037 1002432 1 + . ID=LTnewLM_280033400.1;Parent=LTnewLM_280033400 LTnewLM_28 AUGUSTUS CDS 999037 1002432 1 + 0 ID=LTnewLM_280033400.1:CDS:1;Parent=LTnewLM_280033400.1 ### LTnewLM_28 . polypeptide 999037 1002432 . + . ID=LTnewLM_280033400.1:pep;Derives_from=LTnewLM_280033400.1;orthologous_to=LmjF.28.2570_mRNA;ortholog_cluster=OG0003671;product=term%3DSplicing factor 3B subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08920 LTnewLM_28 Pfam protein_match 999448 999723 . + . Parent=LTnewLM_280033400.1:pep;Name=PF08920;signature_desc=Splicing factor 3B subunit 1 ### LTnewLM_28 AUGUSTUS gene 1004025 1006685 1 + . ID=LTnewLM_280033500 LTnewLM_28 AUGUSTUS mRNA 1004025 1006685 1 + . ID=LTnewLM_280033500.1;Parent=LTnewLM_280033500 LTnewLM_28 AUGUSTUS CDS 1004025 1006685 1 + 0 ID=LTnewLM_280033500.1:CDS:1;Parent=LTnewLM_280033500.1 ### LTnewLM_28 . polypeptide 1004025 1006685 . + . ID=LTnewLM_280033500.1:pep;Derives_from=LTnewLM_280033500.1;orthologous_to=LmjF.28.2580_mRNA;ortholog_cluster=OG0003672;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1005621 1005674 . + . Parent=LTnewLM_280033500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1005993 1006049 . + . Parent=LTnewLM_280033500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 1007805 1009058 1 + . ID=LTnewLM_280033600 LTnewLM_28 AUGUSTUS mRNA 1007805 1009058 1 + . ID=LTnewLM_280033600.1;Parent=LTnewLM_280033600 LTnewLM_28 AUGUSTUS CDS 1007805 1009058 1 + 0 ID=LTnewLM_280033600.1:CDS:1;Parent=LTnewLM_280033600.1 ### LTnewLM_28 . polypeptide 1007805 1009058 . + . ID=LTnewLM_280033600.1:pep;Derives_from=LTnewLM_280033600.1;orthologous_to=LmjF.28.2590_mRNA;ortholog_cluster=OG0003673;product=term%3DADP-ribosylglycohydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03747 LTnewLM_28 Pfam protein_match 1008849 1008965 . + . Parent=LTnewLM_280033600.1:pep;Name=PF03747;signature_desc=ADP-ribosylglycohydrolase ### LTnewLM_28 AUGUSTUS gene 1010394 1015658 1 + . ID=LTnewLM_280033700 LTnewLM_28 AUGUSTUS mRNA 1010394 1015658 1 + . ID=LTnewLM_280033700.1;Parent=LTnewLM_280033700 LTnewLM_28 AUGUSTUS CDS 1010394 1015658 1 + 0 ID=LTnewLM_280033700.1:CDS:1;Parent=LTnewLM_280033700.1 ### LTnewLM_28 . polypeptide 1010394 1015658 . + . ID=LTnewLM_280033700.1:pep;Derives_from=LTnewLM_280033700.1;orthologous_to=LmjF.28.2610_mRNA;ortholog_cluster=OG0003674;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1013277 1013327 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1013595 1013651 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1013664 1013720 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1014357 1014407 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1014570 1014620 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1015539 1015586 . + . Parent=LTnewLM_280033700.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 1016707 1019304 1 + . ID=LTnewLM_280033800 LTnewLM_28 AUGUSTUS mRNA 1016707 1019304 1 + . ID=LTnewLM_280033800.1;Parent=LTnewLM_280033800 LTnewLM_28 AUGUSTUS CDS 1016707 1019304 1 + 0 ID=LTnewLM_280033800.1:CDS:1;Parent=LTnewLM_280033800.1 ### LTnewLM_28 . polypeptide 1016707 1019304 . + . ID=LTnewLM_280033800.1:pep;Derives_from=LTnewLM_280033800.1;orthologous_to=LmjF.28.2620_mRNA;ortholog_cluster=OG0003675;product=term%3DAdaptin N terminal region/Coatomer gamma subunit appendage platform subdomain/Coatomer subunit gamma-1 C-terminal appendage platform%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF08752|Pfam:PF16381;Ontology_term=GO:0005198,GO:0030117,GO:0030126,GO:0016192,GO:0006886 LTnewLM_28 Pfam protein_match 1016800 1018311 . + . Parent=LTnewLM_280033800.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_28 Pfam protein_match 1018531 1018938 . + . Parent=LTnewLM_280033800.1:pep;Name=PF08752;signature_desc=Coatomer gamma subunit appendage platform subdomain;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030126 LTnewLM_28 Pfam protein_match 1018948 1019289 . + . Parent=LTnewLM_280033800.1:pep;Name=PF16381;signature_desc=Coatomer subunit gamma-1 C-terminal appendage platform ### LTnewLM_28 Liftoff gene 1021450 1022946 . + . ID=LTnewLM_280033900;coverage=1.0;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.2630_0 LTnewLM_28 Liftoff mRNA 1021450 1022946 . + . ID=LTnewLM_280033900.1;Parent=LTnewLM_280033900;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 1021450 1022946 . + 0 ID=LTnewLM_280033900.1:CDS:1;Parent=LTnewLM_280033900.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1021450 1022946 . + . ID=LTnewLM_280033900.1:pep;Derives_from=LTnewLM_280033900.1;orthologous_to=LmjF.28.2630_mRNA;ortholog_cluster=OG0003676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1024552 1027254 1 + . ID=LTnewLM_280034000 LTnewLM_28 AUGUSTUS mRNA 1024552 1027254 1 + . ID=LTnewLM_280034000.1;Parent=LTnewLM_280034000 LTnewLM_28 AUGUSTUS CDS 1024552 1027254 1 + 0 ID=LTnewLM_280034000.1:CDS:1;Parent=LTnewLM_280034000.1 ### LTnewLM_28 . polypeptide 1024552 1027254 . + . ID=LTnewLM_280034000.1:pep;Derives_from=LTnewLM_280034000.1;orthologous_to=LmjF.28.2640_mRNA;ortholog_cluster=OG0003677;product=term%3DMoaC family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01967;Ontology_term=GO:0006777 LTnewLM_28 Pfam protein_match 1024906 1025490 . + . Parent=LTnewLM_280034000.1:pep;Name=PF01967;signature_desc=MoaC family;Ontology_term=GO:0006777 ### LTnewLM_28 AUGUSTUS gene 1028409 1030055 1 + . ID=LTnewLM_280034100 LTnewLM_28 AUGUSTUS mRNA 1028409 1030055 1 + . ID=LTnewLM_280034100.1;Parent=LTnewLM_280034100 LTnewLM_28 AUGUSTUS CDS 1028409 1030055 1 + 0 ID=LTnewLM_280034100.1:CDS:1;Parent=LTnewLM_280034100.1 ### LTnewLM_28 . polypeptide 1028409 1030055 . + . ID=LTnewLM_280034100.1:pep;Derives_from=LTnewLM_280034100.1;orthologous_to=LmjF.28.2650_mRNA;ortholog_cluster=OG0003678;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_28 Pfam protein_match 1028628 1028831 . + . Parent=LTnewLM_280034100.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_28 Liftoff gene 1032436 1033134 . + . ID=LTnewLM_280034200;coverage=0.995;sequence_ID=0.933;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2660_0 LTnewLM_28 Liftoff mRNA 1032436 1033134 . + . ID=LTnewLM_280034200.1;Parent=LTnewLM_280034200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 1032436 1033134 . + 0 ID=LTnewLM_280034200.1:CDS:1;Parent=LTnewLM_280034200.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1032436 1033134 . + . ID=LTnewLM_280034200.1:pep;Derives_from=LTnewLM_280034200.1;orthologous_to=LmjF.28.2660_mRNA;ortholog_cluster=OG0003679;product=term%3DSelR domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01641;Ontology_term=GO:0055114,GO:0033743 LTnewLM_28 Pfam protein_match 1032763 1033110 . + . Parent=LTnewLM_280034200.1:pep;Name=PF01641;signature_desc=SelR domain;Ontology_term=GO:0033743,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 1034494 1035417 1 + . ID=LTnewLM_280034300 LTnewLM_28 AUGUSTUS mRNA 1034494 1035417 1 + . ID=LTnewLM_280034300.1;Parent=LTnewLM_280034300 LTnewLM_28 AUGUSTUS CDS 1034494 1035417 1 + 0 ID=LTnewLM_280034300.1:CDS:1;Parent=LTnewLM_280034300.1 ### LTnewLM_28 . polypeptide 1034494 1035417 . + . ID=LTnewLM_280034300.1:pep;Derives_from=LTnewLM_280034300.1;orthologous_to=LmjF.28.2670_mRNA;ortholog_cluster=OG0003680;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_28 Pfam protein_match 1034629 1035201 . + . Parent=LTnewLM_280034300.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_28 AUGUSTUS gene 1036380 1037627 1 + . ID=LTnewLM_280034400 LTnewLM_28 AUGUSTUS mRNA 1036380 1037627 1 + . ID=LTnewLM_280034400.1;Parent=LTnewLM_280034400 LTnewLM_28 AUGUSTUS CDS 1036380 1037627 1 + 0 ID=LTnewLM_280034400.1:CDS:1;Parent=LTnewLM_280034400.1 ### LTnewLM_28 . polypeptide 1036380 1037627 . + . ID=LTnewLM_280034400.1:pep;Derives_from=LTnewLM_280034400.1;orthologous_to=LmjF.28.2680_mRNA;ortholog_cluster=OG0003681;product=term%3DCytochrome oxidase assembly protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02628;Ontology_term=GO:0055114,GO:0016021,GO:0006784,GO:0016627 LTnewLM_28 Pfam protein_match 1036581 1037576 . + . Parent=LTnewLM_280034400.1:pep;Name=PF02628;signature_desc=Cytochrome oxidase assembly protein;Ontology_term=GO:0016627,GO:0006784,GO:0055114,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 1038212 1039333 1 + . ID=LTnewLM_280034500 LTnewLM_28 AUGUSTUS mRNA 1038212 1039333 1 + . ID=LTnewLM_280034500.1;Parent=LTnewLM_280034500 LTnewLM_28 AUGUSTUS CDS 1038212 1039333 1 + 0 ID=LTnewLM_280034500.1:CDS:1;Parent=LTnewLM_280034500.1 ### LTnewLM_28 . polypeptide 1038212 1039333 . + . ID=LTnewLM_280034500.1:pep;Derives_from=LTnewLM_280034500.1;orthologous_to=LmjF.28.2690_mRNA;ortholog_cluster=OG0003682;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1040043 1041434 1 - . ID=LTnewLM_280034600 LTnewLM_28 AUGUSTUS mRNA 1040043 1041434 1 - . ID=LTnewLM_280034600.1;Parent=LTnewLM_280034600 LTnewLM_28 AUGUSTUS CDS 1040043 1041434 1 - 0 ID=LTnewLM_280034600.1:CDS:1;Parent=LTnewLM_280034600.1 ### LTnewLM_28 . polypeptide 1040043 1041434 . - . ID=LTnewLM_280034600.1:pep;Derives_from=LTnewLM_280034600.1;orthologous_to=LmjF.28.2700_mRNA;ortholog_cluster=OG0003683;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1042071 1042931 1 - . ID=LTnewLM_280034700 LTnewLM_28 AUGUSTUS mRNA 1042071 1042931 1 - . ID=LTnewLM_280034700.1;Parent=LTnewLM_280034700 LTnewLM_28 AUGUSTUS CDS 1042071 1042931 1 - 0 ID=LTnewLM_280034700.1:CDS:1;Parent=LTnewLM_280034700.1 ### LTnewLM_28 . polypeptide 1042071 1042931 . - . ID=LTnewLM_280034700.1:pep;Derives_from=LTnewLM_280034700.1;orthologous_to=LmjF.28.2710_mRNA;ortholog_cluster=OG0003684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1043628 1043996 1 - . ID=LTnewLM_280034800 LTnewLM_28 AUGUSTUS mRNA 1043628 1043996 1 - . ID=LTnewLM_280034800.1;Parent=LTnewLM_280034800 LTnewLM_28 AUGUSTUS CDS 1043628 1043996 1 - 0 ID=LTnewLM_280034800.1:CDS:1;Parent=LTnewLM_280034800.1 ### LTnewLM_28 . polypeptide 1043628 1043996 . - . ID=LTnewLM_280034800.1:pep;Derives_from=LTnewLM_280034800.1;orthologous_to=LmjF.28.2720_mRNA;ortholog_cluster=OG0003685;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1044622 1046433 1 - . ID=LTnewLM_280034900 LTnewLM_28 AUGUSTUS mRNA 1044622 1046433 1 - . ID=LTnewLM_280034900.1;Parent=LTnewLM_280034900 LTnewLM_28 AUGUSTUS CDS 1044622 1046433 1 - 0 ID=LTnewLM_280034900.1:CDS:1;Parent=LTnewLM_280034900.1 ### LTnewLM_28 . polypeptide 1044622 1046433 . - . ID=LTnewLM_280034900.1:pep;Derives_from=LTnewLM_280034900.1;orthologous_to=LmjF.28.2730_mRNA;ortholog_cluster=OG0003686;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1047730 1048668 1 - . ID=LTnewLM_280035000 LTnewLM_28 AUGUSTUS mRNA 1047730 1048668 1 - . ID=LTnewLM_280035000.1;Parent=LTnewLM_280035000 LTnewLM_28 AUGUSTUS CDS 1047730 1048668 1 - 0 ID=LTnewLM_280035000.1:CDS:1;Parent=LTnewLM_280035000.1 ### LTnewLM_28 . polypeptide 1047730 1048668 . - . ID=LTnewLM_280035000.1:pep;Derives_from=LTnewLM_280035000.1;orthologous_to=LTnewLM_280035100.1,LmjF.28.2740_mRNA,LmjF.28.2750_mRNA;ortholog_cluster=OG0000203;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1047751 1047822 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1048006 1048119 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1048132 1048257 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1048267 1048380 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1048393 1048500 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1048549 1048656 . - . Parent=LTnewLM_280035000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 1051753 1052691 1 - . ID=LTnewLM_280035100 LTnewLM_28 AUGUSTUS mRNA 1051753 1052691 1 - . ID=LTnewLM_280035100.1;Parent=LTnewLM_280035100 LTnewLM_28 AUGUSTUS CDS 1051753 1052691 1 - 0 ID=LTnewLM_280035100.1:CDS:1;Parent=LTnewLM_280035100.1 ### LTnewLM_28 . polypeptide 1051753 1052691 . - . ID=LTnewLM_280035100.1:pep;Derives_from=LTnewLM_280035100.1;orthologous_to=LTnewLM_280035000.1,LmjF.28.2740_mRNA,LmjF.28.2750_mRNA;ortholog_cluster=OG0000203;product=term%3DWD domain%2C G-beta repeat/Eukaryotic translation initiation factor eIF2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF08662;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1051774 1051845 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1052029 1052142 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1052131 1052436 . - . Parent=LTnewLM_280035100.1:pep;Name=PF08662;signature_desc=Eukaryotic translation initiation factor eIF2A LTnewLM_28 Pfam protein_match 1052155 1052280 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1052290 1052403 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1052416 1052523 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_28 Pfam protein_match 1052572 1052679 . - . Parent=LTnewLM_280035100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_28 AUGUSTUS gene 1053396 1055879 1 - . ID=LTnewLM_280035200 LTnewLM_28 AUGUSTUS mRNA 1053396 1055879 1 - . ID=LTnewLM_280035200.1;Parent=LTnewLM_280035200 LTnewLM_28 AUGUSTUS CDS 1053396 1055879 1 - 0 ID=LTnewLM_280035200.1:CDS:1;Parent=LTnewLM_280035200.1 ### LTnewLM_28 . polypeptide 1053396 1055879 . - . ID=LTnewLM_280035200.1:pep;Derives_from=LTnewLM_280035200.1;orthologous_to=LmjF.28.2760_mRNA;ortholog_cluster=OG0003687;product=term%3DGamma tubulin complex component N-terminal/Gamma tubulin complex component C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17681|Pfam:PF04130;Ontology_term=GO:0000922,GO:0005815,GO:0000226 LTnewLM_28 Pfam protein_match 1053438 1054349 . - . Parent=LTnewLM_280035200.1:pep;Name=PF04130;signature_desc=Gamma tubulin complex component C-terminal;Ontology_term=GO:0000226,GO:0000922,GO:0005815 LTnewLM_28 Pfam protein_match 1054359 1055192 . - . Parent=LTnewLM_280035200.1:pep;Name=PF17681;signature_desc=Gamma tubulin complex component N-terminal ### LTnewLM_28 AUGUSTUS gene 1057885 1059880 0.79 - . ID=LTnewLM_280035300 LTnewLM_28 AUGUSTUS mRNA 1057885 1059880 0.79 - . ID=LTnewLM_280035300.1;Parent=LTnewLM_280035300 LTnewLM_28 AUGUSTUS CDS 1057885 1058349 0.79 - 0 ID=LTnewLM_280035300.1:CDS:1;Parent=LTnewLM_280035300.1 LTnewLM_28 AUGUSTUS CDS 1058408 1059880 0.98 - 0 ID=LTnewLM_280035300.1:CDS:2;Parent=LTnewLM_280035300.1 ### LTnewLM_28 . polypeptide 1057885 1059880 . - . ID=LTnewLM_280035300.1:pep;Derives_from=LTnewLM_280035300.1;orthologous_to=LTnewLM_280035400.1,LTnewLM_280035500.1,LTnewLM_280035600.1,LTnewLM_280035700.1,LTnewLM_280035800.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1058096 1058407 . - . Parent=LTnewLM_280035300.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1058429 1059865 . - . Parent=LTnewLM_280035300.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1058753 1059469 . - . Parent=LTnewLM_280035300.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 1061543 1063537 1 - . ID=LTnewLM_280035400 LTnewLM_28 AUGUSTUS mRNA 1061543 1063537 1 - . ID=LTnewLM_280035400.1;Parent=LTnewLM_280035400 LTnewLM_28 AUGUSTUS CDS 1061543 1063537 1 - 0 ID=LTnewLM_280035400.1:CDS:1;Parent=LTnewLM_280035400.1 ### LTnewLM_28 . polypeptide 1061543 1063537 . - . ID=LTnewLM_280035400.1:pep;Derives_from=LTnewLM_280035400.1;orthologous_to=LTnewLM_280035300.1,LTnewLM_280035500.1,LTnewLM_280035600.1,LTnewLM_280035700.1,LTnewLM_280035800.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1061696 1063522 . - . Parent=LTnewLM_280035400.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1062410 1063126 . - . Parent=LTnewLM_280035400.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 1065203 1067198 0.8 - . ID=LTnewLM_280035500 LTnewLM_28 AUGUSTUS mRNA 1065203 1067198 0.8 - . ID=LTnewLM_280035500.1;Parent=LTnewLM_280035500 LTnewLM_28 AUGUSTUS CDS 1065203 1065667 0.8 - 0 ID=LTnewLM_280035500.1:CDS:1;Parent=LTnewLM_280035500.1 LTnewLM_28 AUGUSTUS CDS 1065726 1067198 1 - 0 ID=LTnewLM_280035500.1:CDS:2;Parent=LTnewLM_280035500.1 ### LTnewLM_28 . polypeptide 1065203 1067198 . - . ID=LTnewLM_280035500.1:pep;Derives_from=LTnewLM_280035500.1;orthologous_to=LTnewLM_280035300.1,LTnewLM_280035400.1,LTnewLM_280035600.1,LTnewLM_280035700.1,LTnewLM_280035800.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1065414 1065725 . - . Parent=LTnewLM_280035500.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1065747 1067183 . - . Parent=LTnewLM_280035500.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1066071 1066787 . - . Parent=LTnewLM_280035500.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 1068876 1070873 1 - . ID=LTnewLM_280035600 LTnewLM_28 AUGUSTUS mRNA 1068876 1070873 1 - . ID=LTnewLM_280035600.1;Parent=LTnewLM_280035600 LTnewLM_28 AUGUSTUS CDS 1068876 1070873 1 - 0 ID=LTnewLM_280035600.1:CDS:1;Parent=LTnewLM_280035600.1 ### LTnewLM_28 . polypeptide 1068876 1070873 . - . ID=LTnewLM_280035600.1:pep;Derives_from=LTnewLM_280035600.1;orthologous_to=LTnewLM_280035300.1,LTnewLM_280035400.1,LTnewLM_280035500.1,LTnewLM_280035700.1,LTnewLM_280035800.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1069029 1070858 . - . Parent=LTnewLM_280035600.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1069743 1070459 . - . Parent=LTnewLM_280035600.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 1072527 1074517 0.83 - . ID=LTnewLM_280035700 LTnewLM_28 AUGUSTUS mRNA 1072527 1074517 0.83 - . ID=LTnewLM_280035700.1;Parent=LTnewLM_280035700 LTnewLM_28 AUGUSTUS CDS 1072527 1072544 0.83 - 0 ID=LTnewLM_280035700.1:CDS:1;Parent=LTnewLM_280035700.1 LTnewLM_28 AUGUSTUS CDS 1072655 1074517 0.86 - 0 ID=LTnewLM_280035700.1:CDS:2;Parent=LTnewLM_280035700.1 ### LTnewLM_28 . polypeptide 1072527 1074517 . - . ID=LTnewLM_280035700.1:pep;Derives_from=LTnewLM_280035700.1;orthologous_to=LTnewLM_280035300.1,LTnewLM_280035400.1,LTnewLM_280035500.1,LTnewLM_280035600.1,LTnewLM_280035800.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1072676 1074502 . - . Parent=LTnewLM_280035700.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1073390 1074106 . - . Parent=LTnewLM_280035700.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 AUGUSTUS gene 1076173 1078139 0.99 - . ID=LTnewLM_280035800 LTnewLM_28 AUGUSTUS mRNA 1076173 1078139 0.99 - . ID=LTnewLM_280035800.1;Parent=LTnewLM_280035800 LTnewLM_28 AUGUSTUS CDS 1076173 1076467 0.99 - 1 ID=LTnewLM_280035800.1:CDS:1;Parent=LTnewLM_280035800.1 LTnewLM_28 AUGUSTUS CDS 1076524 1078139 1 - 0 ID=LTnewLM_280035800.1:CDS:2;Parent=LTnewLM_280035800.1 ### LTnewLM_28 . polypeptide 1076173 1078139 . - . ID=LTnewLM_280035800.1:pep;Derives_from=LTnewLM_280035800.1;orthologous_to=LTnewLM_280035300.1,LTnewLM_280035400.1,LTnewLM_280035500.1,LTnewLM_280035600.1,LTnewLM_280035700.1,LmjF.28.2770_mRNA,LmjF.28.2780_mRNA;ortholog_cluster=OG0000028;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1076352 1078124 . - . Parent=LTnewLM_280035800.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1077012 1077728 . - . Parent=LTnewLM_280035800.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 . polypeptide 1078964 1079677 . - . ID=LTnewLM_280035900.1:pep;Derives_from=LTnewLM_280035900.1;orthologous_to=LTnewLM_280035900.2,LTnewLM_280035900.3,LmjF.28.2790_mRNA;ortholog_cluster=OG0000204;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1078964 1080433 2.46 - . ID=LTnewLM_280035900 LTnewLM_28 AUGUSTUS mRNA 1078964 1079677 0.67 - . ID=LTnewLM_280035900.1;Parent=LTnewLM_280035900 LTnewLM_28 AUGUSTUS CDS 1078964 1079677 0.67 - 0 ID=LTnewLM_280035900.1:CDS:1;Parent=LTnewLM_280035900.1 LTnewLM_28 AUGUSTUS mRNA 1078964 1080433 0.79 - . ID=LTnewLM_280035900.2;Parent=LTnewLM_280035900 LTnewLM_28 AUGUSTUS CDS 1078964 1079775 0.98 - 2 ID=LTnewLM_280035900.2:CDS:1;Parent=LTnewLM_280035900.2 LTnewLM_28 AUGUSTUS CDS 1079854 1080433 0.79 - 0 ID=LTnewLM_280035900.2:CDS:2;Parent=LTnewLM_280035900.2 LTnewLM_28 AUGUSTUS mRNA 1079807 1080433 1 - . ID=LTnewLM_280035900.3;Parent=LTnewLM_280035900 LTnewLM_28 AUGUSTUS CDS 1079807 1080433 1 - 0 ID=LTnewLM_280035900.3:CDS:1;Parent=LTnewLM_280035900.3 ### LTnewLM_28 . polypeptide 1078964 1080433 . - . ID=LTnewLM_280035900.2:pep;Derives_from=LTnewLM_280035900.2;orthologous_to=LTnewLM_280035900.1,LTnewLM_280035900.3,LmjF.28.2790_mRNA;ortholog_cluster=OG0000204;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 1079807 1080433 . - . ID=LTnewLM_280035900.3:pep;Derives_from=LTnewLM_280035900.3;orthologous_to=LTnewLM_280035900.1,LTnewLM_280035900.2,LmjF.28.2790_mRNA;ortholog_cluster=OG0000204;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1081251 1082807 1 - . ID=LTnewLM_280036000 LTnewLM_28 AUGUSTUS mRNA 1081251 1082807 1 - . ID=LTnewLM_280036000.1;Parent=LTnewLM_280036000 LTnewLM_28 AUGUSTUS CDS 1081251 1082807 1 - 0 ID=LTnewLM_280036000.1:CDS:1;Parent=LTnewLM_280036000.1 ### LTnewLM_28 . polypeptide 1081251 1082807 . - . ID=LTnewLM_280036000.1:pep;Derives_from=LTnewLM_280036000.1;orthologous_to=LmjF.28.2800_mRNA;ortholog_cluster=OG0003688;product=term%3DBeta-lactamase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00144 LTnewLM_28 Pfam protein_match 1081668 1082531 . - . Parent=LTnewLM_280036000.1:pep;Name=PF00144;signature_desc=Beta-lactamase ### LTnewLM_28 AUGUSTUS gene 1083531 1084157 1 - . ID=LTnewLM_280036100 LTnewLM_28 AUGUSTUS mRNA 1083531 1084157 1 - . ID=LTnewLM_280036100.1;Parent=LTnewLM_280036100 LTnewLM_28 AUGUSTUS CDS 1083531 1084157 1 - 0 ID=LTnewLM_280036100.1:CDS:1;Parent=LTnewLM_280036100.1 ### LTnewLM_28 . polypeptide 1083531 1084157 . - . ID=LTnewLM_280036100.1:pep;Derives_from=LTnewLM_280036100.1;orthologous_to=LmjF.28.2810_mRNA;ortholog_cluster=OG0003689;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 1084945 1086935 . - . ID=LTnewLM_280036200:pseudogene;coverage=1.0;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.2820_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 1084945 1086935 . - . ID=LTnewLM_280036200.1;Parent=LTnewLM_280036200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 1084945 1086935 . - . ID=LTnewLM_280036200.1:pseudogenic_exon:1;Parent=LTnewLM_280036200.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1084945 1086935 . - . ID=LTnewLM_280036200.1:pep;Derives_from=LTnewLM_280036200.1;orthologous_to=LmjF.28.2820_mRNA;ortholog_cluster=OG0007574;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_28 Pfam protein_match 1086048 1086908 . - . Parent=LTnewLM_280036200.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_28 Pfam protein_match 1086129 1086551 . - . Parent=LTnewLM_280036200.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_28 Liftoff gene 1088006 1091038 . - . ID=LTnewLM_280036300;coverage=0.998;sequence_ID=0.930;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.28.2830_0 LTnewLM_28 Liftoff mRNA 1088006 1091038 . - . ID=LTnewLM_280036300.1;Parent=LTnewLM_280036300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 1088006 1091038 . - 0 ID=LTnewLM_280036300.1:CDS:1;Parent=LTnewLM_280036300.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1088006 1091038 . - . ID=LTnewLM_280036300.1:pep;Derives_from=LTnewLM_280036300.1;orthologous_to=LmjF.28.2830_mRNA;ortholog_cluster=OG0003690;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1091448 1092920 1 - . ID=LTnewLM_280036400 LTnewLM_28 AUGUSTUS mRNA 1091448 1092920 1 - . ID=LTnewLM_280036400.1;Parent=LTnewLM_280036400 LTnewLM_28 AUGUSTUS CDS 1091448 1092920 1 - 0 ID=LTnewLM_280036400.1:CDS:1;Parent=LTnewLM_280036400.1 ### LTnewLM_28 . polypeptide 1091448 1092920 . - . ID=LTnewLM_280036400.1:pep;Derives_from=LTnewLM_280036400.1;orthologous_to=LmjF.28.2840_mRNA;ortholog_cluster=OG0003691;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1093735 1095126 1 - . ID=LTnewLM_280036500 LTnewLM_28 AUGUSTUS mRNA 1093735 1095126 1 - . ID=LTnewLM_280036500.1;Parent=LTnewLM_280036500 LTnewLM_28 AUGUSTUS CDS 1093735 1095126 1 - 0 ID=LTnewLM_280036500.1:CDS:1;Parent=LTnewLM_280036500.1 ### LTnewLM_28 . polypeptide 1093735 1095126 . - . ID=LTnewLM_280036500.1:pep;Derives_from=LTnewLM_280036500.1;orthologous_to=LmjF.28.2850_mRNA;ortholog_cluster=OG0003692;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1097028 1098002 1 - . ID=LTnewLM_280036600 LTnewLM_28 AUGUSTUS mRNA 1097028 1098002 1 - . ID=LTnewLM_280036600.1;Parent=LTnewLM_280036600 LTnewLM_28 AUGUSTUS CDS 1097028 1098002 1 - 0 ID=LTnewLM_280036600.1:CDS:1;Parent=LTnewLM_280036600.1 ### LTnewLM_28 . polypeptide 1097028 1098002 . - . ID=LTnewLM_280036600.1:pep;Derives_from=LTnewLM_280036600.1;orthologous_to=LmjF.28.2860_mRNA;ortholog_cluster=OG0003693;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_28 Pfam protein_match 1097043 1097537 . - . Parent=LTnewLM_280036600.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 LTnewLM_28 Pfam protein_match 1097574 1097993 . - . Parent=LTnewLM_280036600.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 1098828 1099577 1 - . ID=LTnewLM_280036700 LTnewLM_28 AUGUSTUS mRNA 1098828 1099577 1 - . ID=LTnewLM_280036700.1;Parent=LTnewLM_280036700 LTnewLM_28 AUGUSTUS CDS 1098828 1099577 1 - 0 ID=LTnewLM_280036700.1:CDS:1;Parent=LTnewLM_280036700.1 ### LTnewLM_28 . polypeptide 1098828 1099577 . - . ID=LTnewLM_280036700.1:pep;Derives_from=LTnewLM_280036700.1;orthologous_to=LmjF.28.2870_mRNA;ortholog_cluster=OG0003694;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . pseudogene 1100895 1113580 . - . ID=LTnewLM_280036800:pseudogene;coverage=0.999;sequence_ID=0.967;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.2880_0;has_internal_stop=true LTnewLM_28 . pseudogenic_transcript 1100895 1113580 . - . ID=LTnewLM_280036800.1;Parent=LTnewLM_280036800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_28 . pseudogenic_exon 1100895 1113580 . - . ID=LTnewLM_280036800.1:pseudogenic_exon:1;Parent=LTnewLM_280036800.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1100895 1113580 . - . ID=LTnewLM_280036800.1:pep;Derives_from=LTnewLM_280036800.1;orthologous_to=LTnewLM_260015500.1,LmjF.26.1020_mRNA,LmjF.28.2880_mRNA;ortholog_cluster=OG0000185;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780;Ontology_term=GO:0016887,GO:0005524 LTnewLM_28 Pfam protein_match 1105910 1106155 . - . Parent=LTnewLM_280036800.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_28 Pfam protein_match 1106411 1106635 . - . Parent=LTnewLM_280036800.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_28 Pfam protein_match 1106747 1107286 . - . Parent=LTnewLM_280036800.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_28 Pfam protein_match 1107305 1107706 . - . Parent=LTnewLM_280036800.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_28 Pfam protein_match 1107824 1108261 . - . Parent=LTnewLM_280036800.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_28 Pfam protein_match 1108226 1109206 . - . Parent=LTnewLM_280036800.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_28 Pfam protein_match 1109615 1110913 . - . Parent=LTnewLM_280036800.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 ### LTnewLM_28 AUGUSTUS gene 1115260 1116417 1 - . ID=LTnewLM_280036900 LTnewLM_28 AUGUSTUS mRNA 1115260 1116417 1 - . ID=LTnewLM_280036900.1;Parent=LTnewLM_280036900 LTnewLM_28 AUGUSTUS CDS 1115260 1116417 1 - 0 ID=LTnewLM_280036900.1:CDS:1;Parent=LTnewLM_280036900.1 ### LTnewLM_28 . polypeptide 1115260 1116417 . - . ID=LTnewLM_280036900.1:pep;Derives_from=LTnewLM_280036900.1;orthologous_to=LmjF.28.2890_mRNA;ortholog_cluster=OG0003695;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1118183 1119772 1 - . ID=LTnewLM_280037000 LTnewLM_28 AUGUSTUS mRNA 1118183 1119772 1 - . ID=LTnewLM_280037000.1;Parent=LTnewLM_280037000 LTnewLM_28 AUGUSTUS CDS 1118183 1119772 1 - 0 ID=LTnewLM_280037000.1:CDS:1;Parent=LTnewLM_280037000.1 ### LTnewLM_28 . polypeptide 1118183 1119772 . - . ID=LTnewLM_280037000.1:pep;Derives_from=LTnewLM_280037000.1;orthologous_to=LmjF.28.2900_mRNA;ortholog_cluster=OG0003696;product=term%3DDor1-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04124;Ontology_term=GO:0017119 LTnewLM_28 Pfam protein_match 1118840 1119736 . - . Parent=LTnewLM_280037000.1:pep;Name=PF04124;signature_desc=Dor1-like family;Ontology_term=GO:0017119 ### LTnewLM_28 AUGUSTUS gene 1123146 1124504 1 - . ID=LTnewLM_280037100 LTnewLM_28 AUGUSTUS mRNA 1123146 1124504 1 - . ID=LTnewLM_280037100.1;Parent=LTnewLM_280037100 LTnewLM_28 AUGUSTUS CDS 1123146 1124504 1 - 0 ID=LTnewLM_280037100.1:CDS:1;Parent=LTnewLM_280037100.1 ### LTnewLM_28 . polypeptide 1123146 1124504 . - . ID=LTnewLM_280037100.1:pep;Derives_from=LTnewLM_280037100.1;orthologous_to=LmjF.28.2910_mRNA;ortholog_cluster=OG0003697;product=term%3DGlu/Leu/Phe/Val dehydrogenase%2C dimerisation domain/Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02812|Pfam:PF00208;Ontology_term=GO:0055114,GO:0016491,GO:0006520 LTnewLM_28 Pfam protein_match 1123158 1123883 . - . Parent=LTnewLM_280037100.1:pep;Name=PF00208;signature_desc=Glutamate/Leucine/Phenylalanine/Valine dehydrogenase;Ontology_term=GO:0016491,GO:0006520,GO:0055114 LTnewLM_28 Pfam protein_match 1123944 1124321 . - . Parent=LTnewLM_280037100.1:pep;Name=PF02812;signature_desc=Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain;Ontology_term=GO:0016491,GO:0006520,GO:0055114 ### LTnewLM_28 AUGUSTUS gene 1126805 1127344 1 - . ID=LTnewLM_280037200 LTnewLM_28 AUGUSTUS mRNA 1126805 1127344 1 - . ID=LTnewLM_280037200.1;Parent=LTnewLM_280037200 LTnewLM_28 AUGUSTUS CDS 1126805 1127344 1 - 0 ID=LTnewLM_280037200.1:CDS:1;Parent=LTnewLM_280037200.1 ### LTnewLM_28 . polypeptide 1126805 1127344 . - . ID=LTnewLM_280037200.1:pep;Derives_from=LTnewLM_280037200.1;orthologous_to=LmjF.28.2920_mRNA;ortholog_cluster=OG0003698;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1128449 1130653 1 - . ID=LTnewLM_280037300 LTnewLM_28 AUGUSTUS mRNA 1128449 1130653 1 - . ID=LTnewLM_280037300.1;Parent=LTnewLM_280037300 LTnewLM_28 AUGUSTUS CDS 1128449 1130653 1 - 0 ID=LTnewLM_280037300.1:CDS:1;Parent=LTnewLM_280037300.1 ### LTnewLM_28 . polypeptide 1128449 1130653 . - . ID=LTnewLM_280037300.1:pep;Derives_from=LTnewLM_280037300.1;orthologous_to=LmjF.28.2930_mRNA;ortholog_cluster=OG0003699;product=term%3DSodium:sulfate symporter transmembrane region/Citrate transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00939|Pfam:PF03600;Ontology_term=GO:0016020,GO:0016021,GO:0055085,GO:0006814,GO:0005215 LTnewLM_28 Pfam protein_match 1128500 1129885 . - . Parent=LTnewLM_280037300.1:pep;Name=PF00939;signature_desc=Sodium:sulfate symporter transmembrane region;Ontology_term=GO:0005215,GO:0006814,GO:0055085,GO:0016020 LTnewLM_28 Pfam protein_match 1128656 1129768 . - . Parent=LTnewLM_280037300.1:pep;Name=PF03600;signature_desc=Citrate transporter;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_28 AUGUSTUS gene 1131622 1133166 1 - . ID=LTnewLM_280037400 LTnewLM_28 AUGUSTUS mRNA 1131622 1133166 1 - . ID=LTnewLM_280037400.1;Parent=LTnewLM_280037400 LTnewLM_28 AUGUSTUS CDS 1131622 1133166 1 - 0 ID=LTnewLM_280037400.1:CDS:1;Parent=LTnewLM_280037400.1 ### LTnewLM_28 . polypeptide 1131622 1133166 . - . ID=LTnewLM_280037400.1:pep;Derives_from=LTnewLM_280037400.1;orthologous_to=LmjF.28.2940_mRNA;ortholog_cluster=OG0003700;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1136124 1137134 1 - . ID=LTnewLM_280037500 LTnewLM_28 AUGUSTUS mRNA 1136124 1137134 1 - . ID=LTnewLM_280037500.1;Parent=LTnewLM_280037500 LTnewLM_28 AUGUSTUS CDS 1136124 1137134 1 - 0 ID=LTnewLM_280037500.1:CDS:1;Parent=LTnewLM_280037500.1 ### LTnewLM_28 . polypeptide 1136124 1137134 . - . ID=LTnewLM_280037500.1:pep;Derives_from=LTnewLM_280037500.1;orthologous_to=LmjF.28.2950_mRNA;ortholog_cluster=OG0003701;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1138439 1139407 1 - . ID=LTnewLM_280037600 LTnewLM_28 AUGUSTUS mRNA 1138439 1139407 1 - . ID=LTnewLM_280037600.1;Parent=LTnewLM_280037600 LTnewLM_28 AUGUSTUS CDS 1138439 1139407 1 - 0 ID=LTnewLM_280037600.1:CDS:1;Parent=LTnewLM_280037600.1 ### LTnewLM_28 . polypeptide 1138439 1139407 . - . ID=LTnewLM_280037600.1:pep;Derives_from=LTnewLM_280037600.1;orthologous_to=LmjF.28.2960_mRNA;ortholog_cluster=OG0003702;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1142183 1142623 1 - . ID=LTnewLM_280037700 LTnewLM_28 AUGUSTUS mRNA 1142183 1142623 1 - . ID=LTnewLM_280037700.1;Parent=LTnewLM_280037700 LTnewLM_28 AUGUSTUS CDS 1142183 1142623 1 - 0 ID=LTnewLM_280037700.1:CDS:1;Parent=LTnewLM_280037700.1 ### LTnewLM_28 . polypeptide 1142183 1142623 . - . ID=LTnewLM_280037700.1:pep;Derives_from=LTnewLM_280037700.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 1142684 1143010 1 - . ID=LTnewLM_280037800 LTnewLM_28 AUGUSTUS mRNA 1142684 1143010 1 - . ID=LTnewLM_280037800.1;Parent=LTnewLM_280037800 LTnewLM_28 AUGUSTUS CDS 1142684 1143010 1 - 0 ID=LTnewLM_280037800.1:CDS:1;Parent=LTnewLM_280037800.1 ### LTnewLM_28 . polypeptide 1142684 1143010 . - . ID=LTnewLM_280037800.1:pep;Derives_from=LTnewLM_280037800.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 1143143 1143751 1 - . ID=LTnewLM_280037900 LTnewLM_28 AUGUSTUS mRNA 1143143 1143751 1 - . ID=LTnewLM_280037900.1;Parent=LTnewLM_280037900 LTnewLM_28 AUGUSTUS CDS 1143143 1143751 1 - 0 ID=LTnewLM_280037900.1:CDS:1;Parent=LTnewLM_280037900.1 ### LTnewLM_28 . polypeptide 1143143 1143751 . - . ID=LTnewLM_280037900.1:pep;Derives_from=LTnewLM_280037900.1;product=term%3Dhypothetical protein ### LTnewLM_28 AUGUSTUS gene 1145329 1145694 1 - . ID=LTnewLM_280038000 LTnewLM_28 AUGUSTUS mRNA 1145329 1145694 1 - . ID=LTnewLM_280038000.1;Parent=LTnewLM_280038000 LTnewLM_28 AUGUSTUS CDS 1145329 1145694 1 - 0 ID=LTnewLM_280038000.1:CDS:1;Parent=LTnewLM_280038000.1 ### LTnewLM_28 . polypeptide 1145329 1145694 . - . ID=LTnewLM_280038000.1:pep;Derives_from=LTnewLM_280038000.1;orthologous_to=LmjF.28.2970_mRNA;ortholog_cluster=OG0003703;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1146567 1147076 1 - . ID=LTnewLM_280038100 LTnewLM_28 AUGUSTUS mRNA 1146567 1147076 1 - . ID=LTnewLM_280038100.1;Parent=LTnewLM_280038100 LTnewLM_28 AUGUSTUS CDS 1146567 1147076 1 - 0 ID=LTnewLM_280038100.1:CDS:1;Parent=LTnewLM_280038100.1 ### LTnewLM_28 . polypeptide 1146567 1147076 . - . ID=LTnewLM_280038100.1:pep;Derives_from=LTnewLM_280038100.1;orthologous_to=LmjF.28.2980_mRNA;ortholog_cluster=OG0003704;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1147879 1148583 1 - . ID=LTnewLM_280038200 LTnewLM_28 AUGUSTUS mRNA 1147879 1148583 1 - . ID=LTnewLM_280038200.1;Parent=LTnewLM_280038200 LTnewLM_28 AUGUSTUS CDS 1147879 1148583 1 - 0 ID=LTnewLM_280038200.1:CDS:1;Parent=LTnewLM_280038200.1 ### LTnewLM_28 . polypeptide 1147879 1148583 . - . ID=LTnewLM_280038200.1:pep;Derives_from=LTnewLM_280038200.1;orthologous_to=LmjF.28.2990_mRNA;ortholog_cluster=OG0003705;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 Liftoff gene 1149313 1150476 . - . ID=LTnewLM_280038300;coverage=1.0;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.28.3000_0 LTnewLM_28 Liftoff mRNA 1149313 1150476 . - . ID=LTnewLM_280038300.1;Parent=LTnewLM_280038300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_28 Liftoff CDS 1149313 1150476 . - 0 ID=LTnewLM_280038300.1:CDS:1;Parent=LTnewLM_280038300.1;extra_copy_number=0 ### LTnewLM_28 . polypeptide 1149313 1150476 . - . ID=LTnewLM_280038300.1:pep;Derives_from=LTnewLM_280038300.1;orthologous_to=LmjF.28.3000_mRNA;ortholog_cluster=OG0003706;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_28 Pfam protein_match 1149676 1150428 . - . Parent=LTnewLM_280038300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_28 Pfam protein_match 1149688 1150425 . - . Parent=LTnewLM_280038300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_28 AUGUSTUS gene 1151192 1151638 1 - . ID=LTnewLM_280038400 LTnewLM_28 AUGUSTUS mRNA 1151192 1151638 1 - . ID=LTnewLM_280038400.1;Parent=LTnewLM_280038400 LTnewLM_28 AUGUSTUS CDS 1151192 1151638 1 - 0 ID=LTnewLM_280038400.1:CDS:1;Parent=LTnewLM_280038400.1 ### LTnewLM_28 . polypeptide 1151192 1151638 . - . ID=LTnewLM_280038400.1:pep;Derives_from=LTnewLM_280038400.1;orthologous_to=LmjF.28.3005_mRNA;ortholog_cluster=OG0003707;product=term%3DAcetyltransferase (GNAT) domain/Acetyltransferase (GNAT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13673|Pfam:PF00583|Pfam:PF13508;Ontology_term=GO:0008080 LTnewLM_28 Pfam protein_match 1151219 1151494 . - . Parent=LTnewLM_280038400.1:pep;Name=PF13673;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_28 Pfam protein_match 1151234 1151464 . - . Parent=LTnewLM_280038400.1:pep;Name=PF13508;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_28 Pfam protein_match 1151240 1151476 . - . Parent=LTnewLM_280038400.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_28 AUGUSTUS gene 1152486 1155119 0.49 - . ID=LTnewLM_280038500 LTnewLM_28 AUGUSTUS mRNA 1152486 1155119 0.49 - . ID=LTnewLM_280038500.1;Parent=LTnewLM_280038500 LTnewLM_28 AUGUSTUS CDS 1152486 1153907 0.49 - 0 ID=LTnewLM_280038500.1:CDS:1;Parent=LTnewLM_280038500.1 LTnewLM_28 AUGUSTUS CDS 1154220 1155119 0.73 - 0 ID=LTnewLM_280038500.1:CDS:2;Parent=LTnewLM_280038500.1 ### LTnewLM_28 . polypeptide 1152486 1155119 . - . ID=LTnewLM_280038500.1:pep;Derives_from=LTnewLM_280038500.1;orthologous_to=LmjF.28.3010_mRNA;ortholog_cluster=OG0003708;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 1156149 1158653 . - . ID=LTnewLM_280038600.1:pep;Derives_from=LTnewLM_280038600.1;orthologous_to=LTnewLM_280038600.2,LTnewLM_280038600.3,LTnewLM_280038600.4,LTnewLM_280038600.5,LTnewLM_280038700.1,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1156149 1160594 3.08 - . ID=LTnewLM_280038600 LTnewLM_28 AUGUSTUS mRNA 1156149 1158653 0.68 - . ID=LTnewLM_280038600.1;Parent=LTnewLM_280038600 LTnewLM_28 AUGUSTUS CDS 1156149 1158653 0.68 - 0 ID=LTnewLM_280038600.1:CDS:1;Parent=LTnewLM_280038600.1 LTnewLM_28 AUGUSTUS mRNA 1156149 1160594 0.95 - . ID=LTnewLM_280038600.2;Parent=LTnewLM_280038600 LTnewLM_28 AUGUSTUS CDS 1156149 1160594 0.95 - 0 ID=LTnewLM_280038600.2:CDS:1;Parent=LTnewLM_280038600.2 LTnewLM_28 AUGUSTUS mRNA 1157251 1160594 0.52 - . ID=LTnewLM_280038600.3;Parent=LTnewLM_280038600 LTnewLM_28 AUGUSTUS CDS 1157251 1157281 0.52 - 1 ID=LTnewLM_280038600.3:CDS:1;Parent=LTnewLM_280038600.3 LTnewLM_28 AUGUSTUS CDS 1157347 1160594 0.52 - 0 ID=LTnewLM_280038600.3:CDS:2;Parent=LTnewLM_280038600.3 LTnewLM_28 AUGUSTUS mRNA 1157299 1160594 0.66 - . ID=LTnewLM_280038600.4;Parent=LTnewLM_280038600 LTnewLM_28 AUGUSTUS CDS 1157299 1157380 0.66 - 1 ID=LTnewLM_280038600.4:CDS:1;Parent=LTnewLM_280038600.4 LTnewLM_28 AUGUSTUS CDS 1157449 1160594 0.67 - 0 ID=LTnewLM_280038600.4:CDS:2;Parent=LTnewLM_280038600.4 LTnewLM_28 AUGUSTUS mRNA 1158920 1160594 0.27 - . ID=LTnewLM_280038600.5;Parent=LTnewLM_280038600 LTnewLM_28 AUGUSTUS CDS 1158920 1159046 0.27 - 1 ID=LTnewLM_280038600.5:CDS:1;Parent=LTnewLM_280038600.5 LTnewLM_28 AUGUSTUS CDS 1159213 1160594 0.33 - 0 ID=LTnewLM_280038600.5:CDS:2;Parent=LTnewLM_280038600.5 ### LTnewLM_28 . polypeptide 1156149 1160594 . - . ID=LTnewLM_280038600.2:pep;Derives_from=LTnewLM_280038600.2;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.3,LTnewLM_280038600.4,LTnewLM_280038600.5,LTnewLM_280038700.1,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 1157251 1160594 . - . ID=LTnewLM_280038600.3:pep;Derives_from=LTnewLM_280038600.3;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.2,LTnewLM_280038600.4,LTnewLM_280038600.5,LTnewLM_280038700.1,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 1157299 1160594 . - . ID=LTnewLM_280038600.4:pep;Derives_from=LTnewLM_280038600.4;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.2,LTnewLM_280038600.3,LTnewLM_280038600.5,LTnewLM_280038700.1,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 . polypeptide 1158920 1160594 . - . ID=LTnewLM_280038600.5:pep;Derives_from=LTnewLM_280038600.5;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.2,LTnewLM_280038600.3,LTnewLM_280038600.4,LTnewLM_280038700.1,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1161030 1162498 0.46 - . ID=LTnewLM_280038700 LTnewLM_28 AUGUSTUS mRNA 1161030 1162498 0.46 - . ID=LTnewLM_280038700.1;Parent=LTnewLM_280038700 LTnewLM_28 AUGUSTUS CDS 1161030 1161340 0.46 - 2 ID=LTnewLM_280038700.1:CDS:1;Parent=LTnewLM_280038700.1 LTnewLM_28 AUGUSTUS CDS 1161388 1162498 0.47 - 0 ID=LTnewLM_280038700.1:CDS:2;Parent=LTnewLM_280038700.1 ### LTnewLM_28 . polypeptide 1161030 1162498 . - . ID=LTnewLM_280038700.1:pep;Derives_from=LTnewLM_280038700.1;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.2,LTnewLM_280038600.3,LTnewLM_280038600.4,LTnewLM_280038600.5,LTnewLM_280038800.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_28 AUGUSTUS gene 1162596 1164017 1 - . ID=LTnewLM_280038800 LTnewLM_28 AUGUSTUS mRNA 1162596 1164017 1 - . ID=LTnewLM_280038800.1;Parent=LTnewLM_280038800 LTnewLM_28 AUGUSTUS CDS 1162596 1163375 1 - 0 ID=LTnewLM_280038800.1:CDS:1;Parent=LTnewLM_280038800.1 LTnewLM_28 AUGUSTUS CDS 1163727 1164017 1 - 0 ID=LTnewLM_280038800.1:CDS:2;Parent=LTnewLM_280038800.1 ### LTnewLM_28 . polypeptide 1162596 1164017 . - . ID=LTnewLM_280038800.1:pep;Derives_from=LTnewLM_280038800.1;orthologous_to=LTnewLM_280038600.1,LTnewLM_280038600.2,LTnewLM_280038600.3,LTnewLM_280038600.4,LTnewLM_280038600.5,LTnewLM_280038700.1,LmjF.28.3030_mRNA;ortholog_cluster=OG0000029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . contig 1 1232166 . + . Name=LTnewLM_CTG000029 LTnewLM_29 AUGUSTUS gene 4066 4956 1 - . ID=LTnewLM_290005000 LTnewLM_29 AUGUSTUS mRNA 4066 4956 1 - . ID=LTnewLM_290005000.1;Parent=LTnewLM_290005000 LTnewLM_29 AUGUSTUS CDS 4066 4956 1 - 0 ID=LTnewLM_290005000.1:CDS:1;Parent=LTnewLM_290005000.1 ### LTnewLM_29 . polypeptide 4066 4956 . - . ID=LTnewLM_290005000.1:pep;Derives_from=LTnewLM_290005000.1;orthologous_to=LmjF.29.0010_mRNA;ortholog_cluster=OG0003709;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_29 Pfam protein_match 4090 4839 . - . Parent=LTnewLM_290005000.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_29 Pfam protein_match 4291 4809 . - . Parent=LTnewLM_290005000.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_29 AUGUSTUS gene 7228 10365 1 - . ID=LTnewLM_290005100 LTnewLM_29 AUGUSTUS mRNA 7228 10365 1 - . ID=LTnewLM_290005100.1;Parent=LTnewLM_290005100 LTnewLM_29 AUGUSTUS CDS 7228 10365 1 - 0 ID=LTnewLM_290005100.1:CDS:1;Parent=LTnewLM_290005100.1 ### LTnewLM_29 . polypeptide 7228 10365 . - . ID=LTnewLM_290005100.1:pep;Derives_from=LTnewLM_290005100.1;orthologous_to=LmjF.29.0020_mRNA;ortholog_cluster=OG0003710;product=term%3DMetallopeptidase family M24/FACT complex subunit (SPT16/CDC68)/Histone chaperone Rttp106-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00557|Pfam:PF08644|Pfam:PF08512 LTnewLM_29 Pfam protein_match 7723 7950 . - . Parent=LTnewLM_290005100.1:pep;Name=PF08512;signature_desc=Histone chaperone Rttp106-like LTnewLM_29 Pfam protein_match 8320 8763 . - . Parent=LTnewLM_290005100.1:pep;Name=PF08644;signature_desc=FACT complex subunit (SPT16/CDC68) LTnewLM_29 Pfam protein_match 9130 9837 . - . Parent=LTnewLM_290005100.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_29 AUGUSTUS gene 11682 13085 1 - . ID=LTnewLM_290005200 LTnewLM_29 AUGUSTUS mRNA 11682 13085 1 - . ID=LTnewLM_290005200.1;Parent=LTnewLM_290005200 LTnewLM_29 AUGUSTUS CDS 11682 13085 1 - 0 ID=LTnewLM_290005200.1:CDS:1;Parent=LTnewLM_290005200.1 ### LTnewLM_29 . polypeptide 11682 13085 . - . ID=LTnewLM_290005200.1:pep;Derives_from=LTnewLM_290005200.1;orthologous_to=LmjF.29.0030_mRNA;ortholog_cluster=OG0003711;product=term%3DRibosomal protein L3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00297;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_29 Pfam protein_match 12156 12515 . - . Parent=LTnewLM_290005200.1:pep;Name=PF00297;signature_desc=Ribosomal protein L3;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 14121 14984 1 - . ID=LTnewLM_290005300 LTnewLM_29 AUGUSTUS mRNA 14121 14984 1 - . ID=LTnewLM_290005300.1;Parent=LTnewLM_290005300 LTnewLM_29 AUGUSTUS CDS 14121 14984 1 - 0 ID=LTnewLM_290005300.1:CDS:1;Parent=LTnewLM_290005300.1 ### LTnewLM_29 . polypeptide 14121 14984 . - . ID=LTnewLM_290005300.1:pep;Derives_from=LTnewLM_290005300.1;orthologous_to=LmjF.29.0040_mRNA;ortholog_cluster=OG0003712;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 15615 15875 0.99 - . ID=LTnewLM_290005400 LTnewLM_29 AUGUSTUS mRNA 15615 15875 0.99 - . ID=LTnewLM_290005400.1;Parent=LTnewLM_290005400 LTnewLM_29 AUGUSTUS CDS 15615 15875 0.99 - 0 ID=LTnewLM_290005400.1:CDS:1;Parent=LTnewLM_290005400.1 ### LTnewLM_29 . polypeptide 15615 15875 . - . ID=LTnewLM_290005400.1:pep;Derives_from=LTnewLM_290005400.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 16255 18273 1 - . ID=LTnewLM_290005500 LTnewLM_29 AUGUSTUS mRNA 16255 18273 1 - . ID=LTnewLM_290005500.1;Parent=LTnewLM_290005500 LTnewLM_29 AUGUSTUS CDS 16255 18273 1 - 0 ID=LTnewLM_290005500.1:CDS:1;Parent=LTnewLM_290005500.1 ### LTnewLM_29 . polypeptide 16255 18273 . - . ID=LTnewLM_290005500.1:pep;Derives_from=LTnewLM_290005500.1;orthologous_to=LmjF.29.0050_mRNA;ortholog_cluster=OG0003713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 19187 20377 1 - . ID=LTnewLM_290005600 LTnewLM_29 AUGUSTUS mRNA 19187 20377 1 - . ID=LTnewLM_290005600.1;Parent=LTnewLM_290005600 LTnewLM_29 AUGUSTUS CDS 19187 20377 1 - 0 ID=LTnewLM_290005600.1:CDS:1;Parent=LTnewLM_290005600.1 ### LTnewLM_29 . polypeptide 19187 20377 . - . ID=LTnewLM_290005600.1:pep;Derives_from=LTnewLM_290005600.1;orthologous_to=LmjF.29.0060_mRNA;ortholog_cluster=OG0003714;product=term%3DtRNA synthetases class I (W and Y)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00579;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_29 Pfam protein_match 19301 20155 . - . Parent=LTnewLM_290005600.1:pep;Name=PF00579;signature_desc=tRNA synthetases class I (W and Y);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_29 AUGUSTUS gene 21793 22557 1 - . ID=LTnewLM_290005700 LTnewLM_29 AUGUSTUS mRNA 21793 22557 1 - . ID=LTnewLM_290005700.1;Parent=LTnewLM_290005700 LTnewLM_29 AUGUSTUS CDS 21793 22557 1 - 0 ID=LTnewLM_290005700.1:CDS:1;Parent=LTnewLM_290005700.1 ### LTnewLM_29 . polypeptide 21793 22557 . - . ID=LTnewLM_290005700.1:pep;Derives_from=LTnewLM_290005700.1;orthologous_to=LmjF.29.0070_mRNA;ortholog_cluster=OG0003715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 23326 23700 1 - . ID=LTnewLM_290005800 LTnewLM_29 AUGUSTUS mRNA 23326 23700 1 - . ID=LTnewLM_290005800.1;Parent=LTnewLM_290005800 LTnewLM_29 AUGUSTUS CDS 23326 23700 1 - 0 ID=LTnewLM_290005800.1:CDS:1;Parent=LTnewLM_290005800.1 ### LTnewLM_29 . polypeptide 23326 23700 . - . ID=LTnewLM_290005800.1:pep;Derives_from=LTnewLM_290005800.1;orthologous_to=LmjF.29.0080_mRNA;ortholog_cluster=OG0003716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 24323 24883 1 - . ID=LTnewLM_290005900 LTnewLM_29 AUGUSTUS mRNA 24323 24883 1 - . ID=LTnewLM_290005900.1;Parent=LTnewLM_290005900 LTnewLM_29 AUGUSTUS CDS 24323 24883 1 - 0 ID=LTnewLM_290005900.1:CDS:1;Parent=LTnewLM_290005900.1 ### LTnewLM_29 . polypeptide 24323 24883 . - . ID=LTnewLM_290005900.1:pep;Derives_from=LTnewLM_290005900.1;orthologous_to=LmjF.29.0090_mRNA;ortholog_cluster=OG0003717;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_29 Pfam protein_match 24386 24868 . - . Parent=LTnewLM_290005900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_29 Pfam protein_match 24389 24862 . - . Parent=LTnewLM_290005900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_29 Pfam protein_match 24479 24862 . - . Parent=LTnewLM_290005900.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_29 Pfam protein_match 24518 24865 . - . Parent=LTnewLM_290005900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_29 AUGUSTUS gene 25850 26068 1 - . ID=LTnewLM_290006000 LTnewLM_29 AUGUSTUS mRNA 25850 26068 1 - . ID=LTnewLM_290006000.1;Parent=LTnewLM_290006000 LTnewLM_29 AUGUSTUS CDS 25850 26068 1 - 0 ID=LTnewLM_290006000.1:CDS:1;Parent=LTnewLM_290006000.1 ### LTnewLM_29 . polypeptide 25850 26068 . - . ID=LTnewLM_290006000.1:pep;Derives_from=LTnewLM_290006000.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 27002 28612 1 - . ID=LTnewLM_290006100 LTnewLM_29 AUGUSTUS mRNA 27002 28612 1 - . ID=LTnewLM_290006100.1;Parent=LTnewLM_290006100 LTnewLM_29 AUGUSTUS CDS 27002 28612 1 - 0 ID=LTnewLM_290006100.1:CDS:1;Parent=LTnewLM_290006100.1 ### LTnewLM_29 . polypeptide 27002 28612 . - . ID=LTnewLM_290006100.1:pep;Derives_from=LTnewLM_290006100.1;orthologous_to=LmjF.29.0100_mRNA;ortholog_cluster=OG0003718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 30037 37493 0.56 - . ID=LTnewLM_290006200 LTnewLM_29 AUGUSTUS mRNA 30037 37493 0.56 - . ID=LTnewLM_290006200.1;Parent=LTnewLM_290006200 LTnewLM_29 AUGUSTUS CDS 30037 36539 0.56 - 2 ID=LTnewLM_290006200.1:CDS:1;Parent=LTnewLM_290006200.1 LTnewLM_29 AUGUSTUS CDS 36584 37493 0.87 - 0 ID=LTnewLM_290006200.1:CDS:2;Parent=LTnewLM_290006200.1 ### LTnewLM_29 . polypeptide 30037 37493 . - . ID=LTnewLM_290006200.1:pep;Derives_from=LTnewLM_290006200.1;orthologous_to=LmjF.29.0110_mRNA;ortholog_cluster=OG0003719;product=term%3DC2 domain in Dock180 and Zizimin proteins/DHR-2%2C Lobe A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14429|Pfam:PF06920 LTnewLM_29 Pfam protein_match 31053 31517 . - . Parent=LTnewLM_290006200.1:pep;Name=PF06920;signature_desc=DHR-2%2C Lobe A LTnewLM_29 Pfam protein_match 33882 34463 . - . Parent=LTnewLM_290006200.1:pep;Name=PF14429;signature_desc=C2 domain in Dock180 and Zizimin proteins ### LTnewLM_29 AUGUSTUS gene 40232 42961 1 - . ID=LTnewLM_290006300 LTnewLM_29 AUGUSTUS mRNA 40232 42961 1 - . ID=LTnewLM_290006300.1;Parent=LTnewLM_290006300 LTnewLM_29 AUGUSTUS CDS 40232 42961 1 - 0 ID=LTnewLM_290006300.1:CDS:1;Parent=LTnewLM_290006300.1 ### LTnewLM_29 . polypeptide 40232 42961 . - . ID=LTnewLM_290006300.1:pep;Derives_from=LTnewLM_290006300.1;orthologous_to=LmjF.29.0120_mRNA;ortholog_cluster=OG0003720;product=term%3DRPN1 N-terminal domain/Proteasome/cyclosome repeat/26S proteasome non-ATPase regulatory subunit RPN1 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17781|Pfam:PF01851|Pfam:PF18051 LTnewLM_29 Pfam protein_match 40244 40399 . - . Parent=LTnewLM_290006300.1:pep;Name=PF18051;signature_desc=26S proteasome non-ATPase regulatory subunit RPN1 C-terminal LTnewLM_29 Pfam protein_match 41486 41572 . - . Parent=LTnewLM_290006300.1:pep;Name=PF01851;signature_desc=Proteasome/cyclosome repeat LTnewLM_29 Pfam protein_match 41939 42823 . - . Parent=LTnewLM_290006300.1:pep;Name=PF17781;signature_desc=RPN1 N-terminal domain ### LTnewLM_29 AUGUSTUS gene 44228 46930 1 - . ID=LTnewLM_290006400 LTnewLM_29 AUGUSTUS mRNA 44228 46930 1 - . ID=LTnewLM_290006400.1;Parent=LTnewLM_290006400 LTnewLM_29 AUGUSTUS CDS 44228 46930 1 - 0 ID=LTnewLM_290006400.1:CDS:1;Parent=LTnewLM_290006400.1 ### LTnewLM_29 . polypeptide 44228 46930 . - . ID=LTnewLM_290006400.1:pep;Derives_from=LTnewLM_290006400.1;orthologous_to=LmjF.29.0130_mRNA;ortholog_cluster=OG0003721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 47686 48699 1 - . ID=LTnewLM_290006500 LTnewLM_29 AUGUSTUS mRNA 47686 48699 1 - . ID=LTnewLM_290006500.1;Parent=LTnewLM_290006500 LTnewLM_29 AUGUSTUS CDS 47686 48699 1 - 0 ID=LTnewLM_290006500.1:CDS:1;Parent=LTnewLM_290006500.1 ### LTnewLM_29 . polypeptide 47686 48699 . - . ID=LTnewLM_290006500.1:pep;Derives_from=LTnewLM_290006500.1;orthologous_to=LmjF.29.0140_mRNA;ortholog_cluster=OG0003722;product=term%3DRNA polymerase Rpb3/Rpb11 dimerisation domain/RNA polymerase Rpb3/RpoA insert domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01193|Pfam:PF01000;Ontology_term=GO:0006351,GO:0003899,GO:0046983 LTnewLM_29 Pfam protein_match 47842 48642 . - . Parent=LTnewLM_290006500.1:pep;Name=PF01193;signature_desc=RNA polymerase Rpb3/Rpb11 dimerisation domain;Ontology_term=GO:0046983,GO:0006351 LTnewLM_29 Pfam protein_match 48199 48552 . - . Parent=LTnewLM_290006500.1:pep;Name=PF01000;signature_desc=RNA polymerase Rpb3/RpoA insert domain;Ontology_term=GO:0003899,GO:0046983,GO:0006351 ### LTnewLM_29 AUGUSTUS gene 50060 52141 1 - . ID=LTnewLM_290006600 LTnewLM_29 AUGUSTUS mRNA 50060 52141 1 - . ID=LTnewLM_290006600.1;Parent=LTnewLM_290006600 LTnewLM_29 AUGUSTUS CDS 50060 52141 1 - 0 ID=LTnewLM_290006600.1:CDS:1;Parent=LTnewLM_290006600.1 ### LTnewLM_29 . polypeptide 50060 52141 . - . ID=LTnewLM_290006600.1:pep;Derives_from=LTnewLM_290006600.1;orthologous_to=LmjF.29.0150_mRNA;ortholog_cluster=OG0003723;product=term%3DAnaphase-promoting complex%2C cyclosome%2C subunit 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12895 LTnewLM_29 Pfam protein_match 51734 51949 . - . Parent=LTnewLM_290006600.1:pep;Name=PF12895;signature_desc=Anaphase-promoting complex%2C cyclosome%2C subunit 3 ### LTnewLM_29 AUGUSTUS gene 52973 54682 1 - . ID=LTnewLM_290006700 LTnewLM_29 AUGUSTUS mRNA 52973 54682 1 - . ID=LTnewLM_290006700.1;Parent=LTnewLM_290006700 LTnewLM_29 AUGUSTUS CDS 52973 54682 1 - 0 ID=LTnewLM_290006700.1:CDS:1;Parent=LTnewLM_290006700.1 ### LTnewLM_29 . polypeptide 52973 54682 . - . ID=LTnewLM_290006700.1:pep;Derives_from=LTnewLM_290006700.1;orthologous_to=LmjF.29.0160_mRNA;ortholog_cluster=OG0003724;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 59996 60409 1 - . ID=LTnewLM_290006800 LTnewLM_29 AUGUSTUS mRNA 59996 60409 1 - . ID=LTnewLM_290006800.1;Parent=LTnewLM_290006800 LTnewLM_29 AUGUSTUS CDS 59996 60409 1 - 0 ID=LTnewLM_290006800.1:CDS:1;Parent=LTnewLM_290006800.1 ### LTnewLM_29 . polypeptide 59996 60409 . - . ID=LTnewLM_290006800.1:pep;Derives_from=LTnewLM_290006800.1;orthologous_to=LmjF.29.0170_mRNA;ortholog_cluster=OG0003725;product=term%3DProtein phosphatase inhibitor 2 (IPP-2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04979;Ontology_term=GO:0043666,GO:0009966,GO:0004864 LTnewLM_29 Pfam protein_match 60002 60391 . - . Parent=LTnewLM_290006800.1:pep;Name=PF04979;signature_desc=Protein phosphatase inhibitor 2 (IPP-2);Ontology_term=GO:0004864,GO:0009966,GO:0043666 ### LTnewLM_29 AUGUSTUS gene 61102 62712 1 - . ID=LTnewLM_290006900 LTnewLM_29 AUGUSTUS mRNA 61102 62712 1 - . ID=LTnewLM_290006900.1;Parent=LTnewLM_290006900 LTnewLM_29 AUGUSTUS CDS 61102 62712 1 - 0 ID=LTnewLM_290006900.1:CDS:1;Parent=LTnewLM_290006900.1 ### LTnewLM_29 . polypeptide 61102 62712 . - . ID=LTnewLM_290006900.1:pep;Derives_from=LTnewLM_290006900.1;orthologous_to=LmjF.29.0180_mRNA;ortholog_cluster=OG0003726;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 63846 66893 1 - . ID=LTnewLM_290007000 LTnewLM_29 AUGUSTUS mRNA 63846 66893 1 - . ID=LTnewLM_290007000.1;Parent=LTnewLM_290007000 LTnewLM_29 AUGUSTUS CDS 63846 66893 1 - 0 ID=LTnewLM_290007000.1:CDS:1;Parent=LTnewLM_290007000.1 ### LTnewLM_29 . polypeptide 63846 66893 . - . ID=LTnewLM_290007000.1:pep;Derives_from=LTnewLM_290007000.1;orthologous_to=LmjF.29.0190_mRNA;ortholog_cluster=OG0003727;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 68149 72891 1 - . ID=LTnewLM_290007100 LTnewLM_29 AUGUSTUS mRNA 68149 72891 1 - . ID=LTnewLM_290007100.1;Parent=LTnewLM_290007100 LTnewLM_29 AUGUSTUS CDS 68149 72891 1 - 0 ID=LTnewLM_290007100.1:CDS:1;Parent=LTnewLM_290007100.1 ### LTnewLM_29 . polypeptide 68149 72891 . - . ID=LTnewLM_290007100.1:pep;Derives_from=LTnewLM_290007100.1;orthologous_to=LmjF.29.0200_mRNA;ortholog_cluster=OG0003728;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_29 Pfam protein_match 71086 71388 . - . Parent=LTnewLM_290007100.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_29 Pfam protein_match 71587 72765 . - . Parent=LTnewLM_290007100.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_29 Pfam protein_match 71977 72786 . - . Parent=LTnewLM_290007100.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_29 AUGUSTUS gene 74068 74871 1 - . ID=LTnewLM_290007200 LTnewLM_29 AUGUSTUS mRNA 74068 74871 1 - . ID=LTnewLM_290007200.1;Parent=LTnewLM_290007200 LTnewLM_29 AUGUSTUS CDS 74068 74871 1 - 0 ID=LTnewLM_290007200.1:CDS:1;Parent=LTnewLM_290007200.1 ### LTnewLM_29 . polypeptide 74068 74871 . - . ID=LTnewLM_290007200.1:pep;Derives_from=LTnewLM_290007200.1;orthologous_to=LmjF.29.0210_mRNA;ortholog_cluster=OG0003729;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 76181 79081 1 - . ID=LTnewLM_290007300 LTnewLM_29 AUGUSTUS mRNA 76181 79081 1 - . ID=LTnewLM_290007300.1;Parent=LTnewLM_290007300 LTnewLM_29 AUGUSTUS CDS 76181 79081 1 - 0 ID=LTnewLM_290007300.1:CDS:1;Parent=LTnewLM_290007300.1 ### LTnewLM_29 . polypeptide 76181 79081 . - . ID=LTnewLM_290007300.1:pep;Derives_from=LTnewLM_290007300.1;orthologous_to=LmjF.29.0220_mRNA;ortholog_cluster=OG0003730;product=term%3DSec23/Sec24 zinc finger/Sec23/Sec24 trunk domain/Sec23/Sec24 beta-sandwich domain/Sec23/Sec24 helical domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04810|Pfam:PF04811|Pfam:PF08033|Pfam:PF04815;Ontology_term=GO:0008270,GO:0030127,GO:0006886,GO:0006888 LTnewLM_29 Pfam protein_match 76658 76957 . - . Parent=LTnewLM_290007300.1:pep;Name=PF04815;signature_desc=Sec23/Sec24 helical domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_29 Pfam protein_match 77006 77254 . - . Parent=LTnewLM_290007300.1:pep;Name=PF08033;signature_desc=Sec23/Sec24 beta-sandwich domain LTnewLM_29 Pfam protein_match 77306 78007 . - . Parent=LTnewLM_290007300.1:pep;Name=PF04811;signature_desc=Sec23/Sec24 trunk domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_29 Pfam protein_match 78125 78241 . - . Parent=LTnewLM_290007300.1:pep;Name=PF04810;signature_desc=Sec23/Sec24 zinc finger;Ontology_term=GO:0008270,GO:0006886,GO:0006888,GO:0030127 ### LTnewLM_29 AUGUSTUS gene 80058 80705 1 - . ID=LTnewLM_290007400 LTnewLM_29 AUGUSTUS mRNA 80058 80705 1 - . ID=LTnewLM_290007400.1;Parent=LTnewLM_290007400 LTnewLM_29 AUGUSTUS CDS 80058 80705 1 - 0 ID=LTnewLM_290007400.1:CDS:1;Parent=LTnewLM_290007400.1 ### LTnewLM_29 . polypeptide 80058 80705 . - . ID=LTnewLM_290007400.1:pep;Derives_from=LTnewLM_290007400.1;orthologous_to=LmjF.29.0230_mRNA;ortholog_cluster=OG0003731;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 82046 83662 1 - . ID=LTnewLM_290007500 LTnewLM_29 AUGUSTUS mRNA 82046 83662 1 - . ID=LTnewLM_290007500.1;Parent=LTnewLM_290007500 LTnewLM_29 AUGUSTUS CDS 82046 83662 1 - 0 ID=LTnewLM_290007500.1:CDS:1;Parent=LTnewLM_290007500.1 ### LTnewLM_29 . polypeptide 82046 83662 . - . ID=LTnewLM_290007500.1:pep;Derives_from=LTnewLM_290007500.1;orthologous_to=LmjF.29.0240_mRNA;ortholog_cluster=OG0003732;product=term%3DRIO1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01163;Ontology_term=GO:0003824,GO:0005524 LTnewLM_29 Pfam protein_match 82589 83131 . - . Parent=LTnewLM_290007500.1:pep;Name=PF01163;signature_desc=RIO1 family;Ontology_term=GO:0003824,GO:0005524 ### LTnewLM_29 AUGUSTUS gene 88834 89793 1 - . ID=LTnewLM_290007600 LTnewLM_29 AUGUSTUS mRNA 88834 89793 1 - . ID=LTnewLM_290007600.1;Parent=LTnewLM_290007600 LTnewLM_29 AUGUSTUS CDS 88834 89793 1 - 0 ID=LTnewLM_290007600.1:CDS:1;Parent=LTnewLM_290007600.1 ### LTnewLM_29 . polypeptide 88834 89793 . - . ID=LTnewLM_290007600.1:pep;Derives_from=LTnewLM_290007600.1;orthologous_to=LmjF.29.0250_mRNA;ortholog_cluster=OG0003733;product=term%3Dnon-haem dioxygenase in morphine synthesis N-terminal/2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14226|Pfam:PF03171;Ontology_term=GO:0016706,GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 88984 89259 . - . Parent=LTnewLM_290007600.1:pep;Name=PF03171;signature_desc=2OG-Fe(II) oxygenase superfamily;Ontology_term=GO:0016491,GO:0016706,GO:0055114 LTnewLM_29 Pfam protein_match 89416 89787 . - . Parent=LTnewLM_290007600.1:pep;Name=PF14226;signature_desc=non-haem dioxygenase in morphine synthesis N-terminal ### LTnewLM_29 AUGUSTUS gene 90534 92387 1 - . ID=LTnewLM_290007700 LTnewLM_29 AUGUSTUS mRNA 90534 92387 1 - . ID=LTnewLM_290007700.1;Parent=LTnewLM_290007700 LTnewLM_29 AUGUSTUS CDS 90534 92387 1 - 0 ID=LTnewLM_290007700.1:CDS:1;Parent=LTnewLM_290007700.1 ### LTnewLM_29 . polypeptide 90534 92387 . - . ID=LTnewLM_290007700.1:pep;Derives_from=LTnewLM_290007700.1;orthologous_to=LmjF.29.0260_mRNA;ortholog_cluster=OG0003734;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_29 Pfam protein_match 90810 90989 . - . Parent=LTnewLM_290007700.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 LTnewLM_29 Pfam protein_match 91260 91397 . - . Parent=LTnewLM_290007700.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 LTnewLM_29 Pfam protein_match 91524 92000 . - . Parent=LTnewLM_290007700.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_29 . pseudogene 93324 94379 . - . ID=LTnewLM_290007800:pseudogene;coverage=0.996;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0270_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 93324 94379 . - . ID=LTnewLM_290007800.1;Parent=LTnewLM_290007800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 93324 94379 . - . ID=LTnewLM_290007800.1:pseudogenic_exon:1;Parent=LTnewLM_290007800.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 93324 94379 . - . ID=LTnewLM_290007800.1:pep;Derives_from=LTnewLM_290007800.1;orthologous_to=LmjF.29.0270_mRNA;ortholog_cluster=OG0007575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 97196 98671 1 - . ID=LTnewLM_290007900 LTnewLM_29 AUGUSTUS mRNA 97196 98671 1 - . ID=LTnewLM_290007900.1;Parent=LTnewLM_290007900 LTnewLM_29 AUGUSTUS CDS 97196 98671 1 - 0 ID=LTnewLM_290007900.1:CDS:1;Parent=LTnewLM_290007900.1 ### LTnewLM_29 . polypeptide 97196 98671 . - . ID=LTnewLM_290007900.1:pep;Derives_from=LTnewLM_290007900.1;orthologous_to=LTnewLM_100005400.1,LmjF.29.0280_mRNA;ortholog_cluster=OG0000422;product=term%3DFAD binding domain/FAD linked oxidases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565|Pfam:PF02913;Ontology_term=GO:0003824,GO:0016491,GO:0055114,GO:0008762,GO:0050660 LTnewLM_29 Pfam protein_match 97247 97951 . - . Parent=LTnewLM_290007900.1:pep;Name=PF02913;signature_desc=FAD linked oxidases%2C C-terminal domain;Ontology_term=GO:0003824,GO:0050660 LTnewLM_29 Pfam protein_match 98093 98494 . - . Parent=LTnewLM_290007900.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_29 AUGUSTUS gene 99895 101109 1 - . ID=LTnewLM_290008000 LTnewLM_29 AUGUSTUS mRNA 99895 101109 1 - . ID=LTnewLM_290008000.1;Parent=LTnewLM_290008000 LTnewLM_29 AUGUSTUS CDS 99895 101109 1 - 0 ID=LTnewLM_290008000.1:CDS:1;Parent=LTnewLM_290008000.1 ### LTnewLM_29 . polypeptide 99895 101109 . - . ID=LTnewLM_290008000.1:pep;Derives_from=LTnewLM_290008000.1;orthologous_to=LmjF.29.0290_mRNA;ortholog_cluster=OG0003735;product=term%3Dzinc-finger of a C2HC-type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13913 LTnewLM_29 Pfam protein_match 99922 99990 . - . Parent=LTnewLM_290008000.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_29 Pfam protein_match 100255 100326 . - . Parent=LTnewLM_290008000.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type ### LTnewLM_29 . pseudogene 102311 103622 . - . ID=LTnewLM_290008100:pseudogene;coverage=0.997;sequence_ID=0.918;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0300_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 102311 103622 . - . ID=LTnewLM_290008100.1;Parent=LTnewLM_290008100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 102311 103622 . - . ID=LTnewLM_290008100.1:pseudogenic_exon:1;Parent=LTnewLM_290008100.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 102311 103622 . - . ID=LTnewLM_290008100.1:pep;Derives_from=LTnewLM_290008100.1;orthologous_to=LmjF.29.0300_mRNA;ortholog_cluster=OG0007576;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 106719 107090 1 - . ID=LTnewLM_290008200 LTnewLM_29 AUGUSTUS mRNA 106719 107090 1 - . ID=LTnewLM_290008200.1;Parent=LTnewLM_290008200 LTnewLM_29 AUGUSTUS CDS 106719 107090 1 - 0 ID=LTnewLM_290008200.1:CDS:1;Parent=LTnewLM_290008200.1 ### LTnewLM_29 . polypeptide 106719 107090 . - . ID=LTnewLM_290008200.1:pep;Derives_from=LTnewLM_290008200.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 108504 109661 1 - . ID=LTnewLM_290008300 LTnewLM_29 AUGUSTUS mRNA 108504 109661 1 - . ID=LTnewLM_290008300.1;Parent=LTnewLM_290008300 LTnewLM_29 AUGUSTUS CDS 108504 109661 1 - 0 ID=LTnewLM_290008300.1:CDS:1;Parent=LTnewLM_290008300.1 ### LTnewLM_29 . polypeptide 108504 109661 . - . ID=LTnewLM_290008300.1:pep;Derives_from=LTnewLM_290008300.1;orthologous_to=LmjF.29.0320_mRNA;ortholog_cluster=OG0003736;product=term%3DSTI1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17830 LTnewLM_29 Pfam protein_match 108660 108818 . - . Parent=LTnewLM_290008300.1:pep;Name=PF17830;signature_desc=STI1 domain ### LTnewLM_29 AUGUSTUS gene 110303 111472 1 - . ID=LTnewLM_290008400 LTnewLM_29 AUGUSTUS mRNA 110303 111472 1 - . ID=LTnewLM_290008400.1;Parent=LTnewLM_290008400 LTnewLM_29 AUGUSTUS CDS 110303 111472 1 - 0 ID=LTnewLM_290008400.1:CDS:1;Parent=LTnewLM_290008400.1 ### LTnewLM_29 . polypeptide 110303 111472 . - . ID=LTnewLM_290008400.1:pep;Derives_from=LTnewLM_290008400.1;orthologous_to=LmjF.29.0330_mRNA,LmjF.32.1570_mRNA;ortholog_cluster=OG0000423;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_29 Pfam protein_match 110858 111202 . - . Parent=LTnewLM_290008400.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_29 AUGUSTUS gene 112630 113916 1 - . ID=LTnewLM_290008500 LTnewLM_29 AUGUSTUS mRNA 112630 113916 1 - . ID=LTnewLM_290008500.1;Parent=LTnewLM_290008500 LTnewLM_29 AUGUSTUS CDS 112630 113916 1 - 0 ID=LTnewLM_290008500.1:CDS:1;Parent=LTnewLM_290008500.1 ### LTnewLM_29 . polypeptide 112630 113916 . - . ID=LTnewLM_290008500.1:pep;Derives_from=LTnewLM_290008500.1;orthologous_to=LmjF.29.0340_mRNA;ortholog_cluster=OG0003737;product=term%3DUBA-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14555 LTnewLM_29 Pfam protein_match 113803 113898 . - . Parent=LTnewLM_290008500.1:pep;Name=PF14555;signature_desc=UBA-like domain ### LTnewLM_29 AUGUSTUS gene 115632 119723 1 - . ID=LTnewLM_290008600 LTnewLM_29 AUGUSTUS mRNA 115632 119723 1 - . ID=LTnewLM_290008600.1;Parent=LTnewLM_290008600 LTnewLM_29 AUGUSTUS CDS 115632 119723 1 - 0 ID=LTnewLM_290008600.1:CDS:1;Parent=LTnewLM_290008600.1 ### LTnewLM_29 . polypeptide 115632 119723 . - . ID=LTnewLM_290008600.1:pep;Derives_from=LTnewLM_290008600.1;orthologous_to=LmjF.29.0350_mRNA;ortholog_cluster=OG0003738;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 120778 121302 1 - . ID=LTnewLM_290008700 LTnewLM_29 AUGUSTUS mRNA 120778 121302 1 - . ID=LTnewLM_290008700.1;Parent=LTnewLM_290008700 LTnewLM_29 AUGUSTUS CDS 120778 121302 1 - 0 ID=LTnewLM_290008700.1:CDS:1;Parent=LTnewLM_290008700.1 ### LTnewLM_29 . polypeptide 120778 121302 . - . ID=LTnewLM_290008700.1:pep;Derives_from=LTnewLM_290008700.1;orthologous_to=LmjF.29.0360_mRNA;ortholog_cluster=OG0003739;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 124917 129569 1 - . ID=LTnewLM_290008800 LTnewLM_29 AUGUSTUS mRNA 124917 129569 1 - . ID=LTnewLM_290008800.1;Parent=LTnewLM_290008800 LTnewLM_29 AUGUSTUS CDS 124917 129569 1 - 0 ID=LTnewLM_290008800.1:CDS:1;Parent=LTnewLM_290008800.1 ### LTnewLM_29 . polypeptide 124917 129569 . - . ID=LTnewLM_290008800.1:pep;Derives_from=LTnewLM_290008800.1;orthologous_to=LmjF.29.0370_mRNA;ortholog_cluster=OG0003740;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 126546 126872 . - . Parent=LTnewLM_290008800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 126663 126857 . - . Parent=LTnewLM_290008800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_29 Pfam protein_match 127149 127553 . - . Parent=LTnewLM_290008800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 127158 127613 . - . Parent=LTnewLM_290008800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 131256 134183 1 - . ID=LTnewLM_290008900 LTnewLM_29 AUGUSTUS mRNA 131256 134183 1 - . ID=LTnewLM_290008900.1;Parent=LTnewLM_290008900 LTnewLM_29 AUGUSTUS CDS 131256 134183 1 - 0 ID=LTnewLM_290008900.1:CDS:1;Parent=LTnewLM_290008900.1 ### LTnewLM_29 . polypeptide 131256 134183 . - . ID=LTnewLM_290008900.1:pep;Derives_from=LTnewLM_290008900.1;orthologous_to=LmjF.29.0380_mRNA;ortholog_cluster=OG0003741;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 135805 136587 1 - . ID=LTnewLM_290009000 LTnewLM_29 AUGUSTUS mRNA 135805 136587 1 - . ID=LTnewLM_290009000.1;Parent=LTnewLM_290009000 LTnewLM_29 AUGUSTUS CDS 135805 136587 1 - 0 ID=LTnewLM_290009000.1:CDS:1;Parent=LTnewLM_290009000.1 ### LTnewLM_29 . polypeptide 135805 136587 . - . ID=LTnewLM_290009000.1:pep;Derives_from=LTnewLM_290009000.1;orthologous_to=LmjF.29.0390_mRNA;ortholog_cluster=OG0003742;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 136024 136230 . - . Parent=LTnewLM_290009000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 136354 136545 . - . Parent=LTnewLM_290009000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 AUGUSTUS gene 137474 137974 1 - . ID=LTnewLM_290009100 LTnewLM_29 AUGUSTUS mRNA 137474 137974 1 - . ID=LTnewLM_290009100.1;Parent=LTnewLM_290009100 LTnewLM_29 AUGUSTUS CDS 137474 137974 1 - 0 ID=LTnewLM_290009100.1:CDS:1;Parent=LTnewLM_290009100.1 ### LTnewLM_29 . polypeptide 137474 137974 . - . ID=LTnewLM_290009100.1:pep;Derives_from=LTnewLM_290009100.1;orthologous_to=LmjF.29.0400_mRNA;ortholog_cluster=OG0003743;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 138590 140326 1 - . ID=LTnewLM_290009200 LTnewLM_29 AUGUSTUS mRNA 138590 140326 1 - . ID=LTnewLM_290009200.1;Parent=LTnewLM_290009200 LTnewLM_29 AUGUSTUS CDS 138590 140326 1 - 0 ID=LTnewLM_290009200.1:CDS:1;Parent=LTnewLM_290009200.1 ### LTnewLM_29 . polypeptide 138590 140326 . - . ID=LTnewLM_290009200.1:pep;Derives_from=LTnewLM_290009200.1;orthologous_to=LmjF.29.0410_mRNA;ortholog_cluster=OG0003744;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 141378 142592 1 - . ID=LTnewLM_290009300 LTnewLM_29 AUGUSTUS mRNA 141378 142592 1 - . ID=LTnewLM_290009300.1;Parent=LTnewLM_290009300 LTnewLM_29 AUGUSTUS CDS 141378 142592 1 - 0 ID=LTnewLM_290009300.1:CDS:1;Parent=LTnewLM_290009300.1 ### LTnewLM_29 . polypeptide 141378 142592 . - . ID=LTnewLM_290009300.1:pep;Derives_from=LTnewLM_290009300.1;orthologous_to=LmjF.29.0420_mRNA;ortholog_cluster=OG0003745;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 143889 145583 1 - . ID=LTnewLM_290009400 LTnewLM_29 AUGUSTUS mRNA 143889 145583 1 - . ID=LTnewLM_290009400.1;Parent=LTnewLM_290009400 LTnewLM_29 AUGUSTUS CDS 143889 145583 1 - 0 ID=LTnewLM_290009400.1:CDS:1;Parent=LTnewLM_290009400.1 ### LTnewLM_29 . polypeptide 143889 145583 . - . ID=LTnewLM_290009400.1:pep;Derives_from=LTnewLM_290009400.1;orthologous_to=LmjF.29.0430_mRNA;ortholog_cluster=OG0003746;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 148643 149068 0.97 - . ID=LTnewLM_290009500 LTnewLM_29 AUGUSTUS mRNA 148643 149068 0.97 - . ID=LTnewLM_290009500.1;Parent=LTnewLM_290009500 LTnewLM_29 AUGUSTUS CDS 148643 149068 0.97 - 0 ID=LTnewLM_290009500.1:CDS:1;Parent=LTnewLM_290009500.1 ### LTnewLM_29 . polypeptide 148643 149068 . - . ID=LTnewLM_290009500.1:pep;Derives_from=LTnewLM_290009500.1;orthologous_to=LTnewLM_120012300.1,LTnewLM_340010900.1;ortholog_cluster=OG0000323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 149303 149638 1 - . ID=LTnewLM_290009600 LTnewLM_29 AUGUSTUS mRNA 149303 149638 1 - . ID=LTnewLM_290009600.1;Parent=LTnewLM_290009600 LTnewLM_29 AUGUSTUS CDS 149303 149638 1 - 0 ID=LTnewLM_290009600.1:CDS:1;Parent=LTnewLM_290009600.1 ### LTnewLM_29 . polypeptide 149303 149638 . - . ID=LTnewLM_290009600.1:pep;Derives_from=LTnewLM_290009600.1;product=term%3Dhypothetical protein ### LTnewLM_29 . polypeptide 150626 151765 . - . ID=LTnewLM_290009700.1:pep;Derives_from=LTnewLM_290009700.1;orthologous_to=LmjF.29.0440.1_mRNA,LmjF.29.0440.2_mRNA;ortholog_cluster=OG0000531;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_29 Pfam protein_match 150860 151510 . - . Parent=LTnewLM_290009700.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_29 . polypeptide 150626 152025 . - . ID=LTnewLM_290009700.2:pep;Derives_from=LTnewLM_290009700.2;product=term%3Dhypothetical protein ### LTnewLM_29 . pseudogene 150626 152042 . - . ID=LTnewLM_290009700:pseudogene;coverage=0.997;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.0440_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 150626 151952 . - . ID=LTnewLM_290009700.1;Parent=LTnewLM_290009700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 150626 151765 . - . ID=LTnewLM_290009700.1:pseudogenic_exon:1;Parent=LTnewLM_290009700.1;extra_copy_number=0 LTnewLM_29 . pseudogenic_transcript 150626 152042 . - . ID=LTnewLM_290009700.2;Parent=LTnewLM_290009700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 150626 152025 . - . ID=LTnewLM_290009700.2:pseudogenic_exon:1;Parent=LTnewLM_290009700.2;extra_copy_number=0 ### LTnewLM_29 AUGUSTUS gene 152779 154728 1 - . ID=LTnewLM_290009800 LTnewLM_29 AUGUSTUS mRNA 152779 154728 1 - . ID=LTnewLM_290009800.1;Parent=LTnewLM_290009800 LTnewLM_29 AUGUSTUS CDS 152779 154728 1 - 0 ID=LTnewLM_290009800.1:CDS:1;Parent=LTnewLM_290009800.1 ### LTnewLM_29 . polypeptide 152779 154728 . - . ID=LTnewLM_290009800.1:pep;Derives_from=LTnewLM_290009800.1;orthologous_to=LmjF.29.0450_mRNA;ortholog_cluster=OG0003747;product=term%3DRad51/recA bacterial DNA recombination protein/KaiC%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08423|Pfam:PF00154|Pfam:PF06745;Ontology_term=GO:0003697,GO:0006281,GO:0009432,GO:0005524 LTnewLM_29 Pfam protein_match 152785 153258 . - . Parent=LTnewLM_290009800.1:pep;Name=PF08423;signature_desc=Rad51 LTnewLM_29 Pfam protein_match 153751 153888 . - . Parent=LTnewLM_290009800.1:pep;Name=PF06745;signature_desc=KaiC LTnewLM_29 Pfam protein_match 153757 153891 . - . Parent=LTnewLM_290009800.1:pep;Name=PF00154;signature_desc=recA bacterial DNA recombination protein;Ontology_term=GO:0003697,GO:0005524,GO:0006281,GO:0009432 LTnewLM_29 Pfam protein_match 153763 153915 . - . Parent=LTnewLM_290009800.1:pep;Name=PF08423;signature_desc=Rad51 ### LTnewLM_29 AUGUSTUS gene 157987 160182 1 - . ID=LTnewLM_290009900 LTnewLM_29 AUGUSTUS mRNA 157987 160182 1 - . ID=LTnewLM_290009900.1;Parent=LTnewLM_290009900 LTnewLM_29 AUGUSTUS CDS 157987 160182 1 - 0 ID=LTnewLM_290009900.1:CDS:1;Parent=LTnewLM_290009900.1 ### LTnewLM_29 . polypeptide 157987 160182 . - . ID=LTnewLM_290009900.1:pep;Derives_from=LTnewLM_290009900.1;orthologous_to=LmjF.29.0460_mRNA;ortholog_cluster=OG0003748;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 164196 165542 1 - . ID=LTnewLM_290010000 LTnewLM_29 AUGUSTUS mRNA 164196 165542 1 - . ID=LTnewLM_290010000.1;Parent=LTnewLM_290010000 LTnewLM_29 AUGUSTUS CDS 164196 165542 1 - 0 ID=LTnewLM_290010000.1:CDS:1;Parent=LTnewLM_290010000.1 ### LTnewLM_29 . polypeptide 164196 165542 . - . ID=LTnewLM_290010000.1:pep;Derives_from=LTnewLM_290010000.1;orthologous_to=LmjF.29.0470_mRNA;ortholog_cluster=OG0003749;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 167134 168090 1 - . ID=LTnewLM_290010100 LTnewLM_29 AUGUSTUS mRNA 167134 168090 1 - . ID=LTnewLM_290010100.1;Parent=LTnewLM_290010100 LTnewLM_29 AUGUSTUS CDS 167134 168090 1 - 0 ID=LTnewLM_290010100.1:CDS:1;Parent=LTnewLM_290010100.1 ### LTnewLM_29 . polypeptide 167134 168090 . - . ID=LTnewLM_290010100.1:pep;Derives_from=LTnewLM_290010100.1;orthologous_to=LmjF.29.0480_mRNA;ortholog_cluster=OG0003750;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 169487 170581 1 - . ID=LTnewLM_290010200 LTnewLM_29 AUGUSTUS mRNA 169487 170581 1 - . ID=LTnewLM_290010200.1;Parent=LTnewLM_290010200 LTnewLM_29 AUGUSTUS CDS 169487 170581 1 - 0 ID=LTnewLM_290010200.1:CDS:1;Parent=LTnewLM_290010200.1 ### LTnewLM_29 . polypeptide 169487 170581 . - . ID=LTnewLM_290010200.1:pep;Derives_from=LTnewLM_290010200.1;orthologous_to=LmjF.29.0490_mRNA;ortholog_cluster=OG0003751;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 176102 180022 0.97 - . ID=LTnewLM_290010300 LTnewLM_29 AUGUSTUS mRNA 176102 180022 0.97 - . ID=LTnewLM_290010300.1;Parent=LTnewLM_290010300 LTnewLM_29 AUGUSTUS CDS 176102 180022 0.97 - 0 ID=LTnewLM_290010300.1:CDS:1;Parent=LTnewLM_290010300.1 ### LTnewLM_29 . polypeptide 176102 180022 . - . ID=LTnewLM_290010300.1:pep;Derives_from=LTnewLM_290010300.1;orthologous_to=LmjF.29.0500_mRNA;ortholog_cluster=OG0003752;product=term%3DCa2+-ATPase N terminal autoinhibitory domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12515;Ontology_term=GO:0005516 LTnewLM_29 Pfam protein_match 179366 179539 . - . Parent=LTnewLM_290010300.1:pep;Name=PF12515;signature_desc=Ca2+-ATPase N terminal autoinhibitory domain;Ontology_term=GO:0005516 ### LTnewLM_29 AUGUSTUS gene 186842 187261 1 - . ID=LTnewLM_290010400 LTnewLM_29 AUGUSTUS mRNA 186842 187261 1 - . ID=LTnewLM_290010400.1;Parent=LTnewLM_290010400 LTnewLM_29 AUGUSTUS CDS 186842 187261 1 - 0 ID=LTnewLM_290010400.1:CDS:1;Parent=LTnewLM_290010400.1 ### LTnewLM_29 . polypeptide 186842 187261 . - . ID=LTnewLM_290010400.1:pep;Derives_from=LTnewLM_290010400.1;orthologous_to=LmjF.29.0510_mRNA;ortholog_cluster=OG0003753;product=term%3DCofilin/tropomyosin-type actin-binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00241;Ontology_term=GO:0005622,GO:0003779 LTnewLM_29 Pfam protein_match 186869 187219 . - . Parent=LTnewLM_290010400.1:pep;Name=PF00241;signature_desc=Cofilin/tropomyosin-type actin-binding protein;Ontology_term=GO:0003779,GO:0005622 ### LTnewLM_29 AUGUSTUS gene 187930 189291 1 - . ID=LTnewLM_290010500 LTnewLM_29 AUGUSTUS mRNA 187930 189291 1 - . ID=LTnewLM_290010500.1;Parent=LTnewLM_290010500 LTnewLM_29 AUGUSTUS CDS 187930 189291 1 - 0 ID=LTnewLM_290010500.1:CDS:1;Parent=LTnewLM_290010500.1 ### LTnewLM_29 . polypeptide 187930 189291 . - . ID=LTnewLM_290010500.1:pep;Derives_from=LTnewLM_290010500.1;orthologous_to=LmjF.29.0520_mRNA;ortholog_cluster=OG0003754;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 190397 199267 1 - . ID=LTnewLM_290010600 LTnewLM_29 AUGUSTUS mRNA 190397 199267 1 - . ID=LTnewLM_290010600.1;Parent=LTnewLM_290010600 LTnewLM_29 AUGUSTUS CDS 190397 199267 1 - 0 ID=LTnewLM_290010600.1:CDS:1;Parent=LTnewLM_290010600.1 ### LTnewLM_29 . polypeptide 190397 199267 . - . ID=LTnewLM_290010600.1:pep;Derives_from=LTnewLM_290010600.1;orthologous_to=LmjF.29.0530_mRNA;ortholog_cluster=OG0003755;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 200539 202047 1 - . ID=LTnewLM_290010700 LTnewLM_29 AUGUSTUS mRNA 200539 202047 1 - . ID=LTnewLM_290010700.1;Parent=LTnewLM_290010700 LTnewLM_29 AUGUSTUS CDS 200539 202047 1 - 0 ID=LTnewLM_290010700.1:CDS:1;Parent=LTnewLM_290010700.1 ### LTnewLM_29 . polypeptide 200539 202047 . - . ID=LTnewLM_290010700.1:pep;Derives_from=LTnewLM_290010700.1;orthologous_to=LmjF.29.0540_mRNA;ortholog_cluster=OG0003756;product=term%3DExonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929 LTnewLM_29 Pfam protein_match 200743 201378 . - . Parent=LTnewLM_290010700.1:pep;Name=PF00929;signature_desc=Exonuclease ### LTnewLM_29 Liftoff gene 203225 206491 . - . ID=LTnewLM_290010800;coverage=1.0;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0550_0 LTnewLM_29 Liftoff mRNA 203225 206491 . - . ID=LTnewLM_290010800.1;Parent=LTnewLM_290010800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 203225 206491 . - 0 ID=LTnewLM_290010800.1:CDS:1;Parent=LTnewLM_290010800.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 203225 206491 . - . ID=LTnewLM_290010800.1:pep;Derives_from=LTnewLM_290010800.1;orthologous_to=LmjF.29.0550_mRNA;ortholog_cluster=OG0003757;product=term%3DExonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929 LTnewLM_29 Pfam protein_match 203456 203971 . - . Parent=LTnewLM_290010800.1:pep;Name=PF00929;signature_desc=Exonuclease ### LTnewLM_29 . pseudogene 207789 209509 . - . ID=LTnewLM_290010900:pseudogene;coverage=0.975;sequence_ID=0.867;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0555_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 207789 209509 . - . ID=LTnewLM_290010900.1;Parent=LTnewLM_290010900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 207789 209509 . - . ID=LTnewLM_290010900.1:pseudogenic_exon:1;Parent=LTnewLM_290010900.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 207789 209509 . - . ID=LTnewLM_290010900.1:pep;Derives_from=LTnewLM_290010900.1;orthologous_to=LmjF.29.0555_mRNA;ortholog_cluster=OG0007577;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 209765 210982 1 - . ID=LTnewLM_290011000 LTnewLM_29 AUGUSTUS mRNA 209765 210982 1 - . ID=LTnewLM_290011000.1;Parent=LTnewLM_290011000 LTnewLM_29 AUGUSTUS CDS 209765 210982 1 - 0 ID=LTnewLM_290011000.1:CDS:1;Parent=LTnewLM_290011000.1 ### LTnewLM_29 . polypeptide 209765 210982 . - . ID=LTnewLM_290011000.1:pep;Derives_from=LTnewLM_290011000.1;orthologous_to=LmjF.29.0560_mRNA;ortholog_cluster=OG0003758;product=term%3DExonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929 LTnewLM_29 Pfam protein_match 210233 210754 . - . Parent=LTnewLM_290011000.1:pep;Name=PF00929;signature_desc=Exonuclease ### LTnewLM_29 AUGUSTUS gene 211734 214271 1 - . ID=LTnewLM_290011100 LTnewLM_29 AUGUSTUS mRNA 211734 214271 1 - . ID=LTnewLM_290011100.1;Parent=LTnewLM_290011100 LTnewLM_29 AUGUSTUS CDS 211734 214271 1 - 0 ID=LTnewLM_290011100.1:CDS:1;Parent=LTnewLM_290011100.1 ### LTnewLM_29 . polypeptide 211734 214271 . - . ID=LTnewLM_290011100.1:pep;Derives_from=LTnewLM_290011100.1;orthologous_to=LmjF.29.0570_mRNA;ortholog_cluster=OG0003759;product=term%3DAnkyrin repeats (3 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796 LTnewLM_29 Pfam protein_match 212211 212498 . - . Parent=LTnewLM_290011100.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_29 AUGUSTUS gene 215491 216942 1 - . ID=LTnewLM_290011200 LTnewLM_29 AUGUSTUS mRNA 215491 216942 1 - . ID=LTnewLM_290011200.1;Parent=LTnewLM_290011200 LTnewLM_29 AUGUSTUS CDS 215491 216942 1 - 0 ID=LTnewLM_290011200.1:CDS:1;Parent=LTnewLM_290011200.1 ### LTnewLM_29 . polypeptide 215491 216942 . - . ID=LTnewLM_290011200.1:pep;Derives_from=LTnewLM_290011200.1;orthologous_to=LmjF.29.0580_mRNA;ortholog_cluster=OG0003760;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 217837 221157 1 - . ID=LTnewLM_290011300 LTnewLM_29 AUGUSTUS mRNA 217837 221157 1 - . ID=LTnewLM_290011300.1;Parent=LTnewLM_290011300 LTnewLM_29 AUGUSTUS CDS 217837 221157 1 - 0 ID=LTnewLM_290011300.1:CDS:1;Parent=LTnewLM_290011300.1 ### LTnewLM_29 . polypeptide 217837 221157 . - . ID=LTnewLM_290011300.1:pep;Derives_from=LTnewLM_290011300.1;orthologous_to=LmjF.29.0590_mRNA;ortholog_cluster=OG0003761;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/ERCC3/RAD25/XPB C-terminal helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF16203|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_29 Pfam protein_match 218398 218886 . - . Parent=LTnewLM_290011300.1:pep;Name=PF16203;signature_desc=ERCC3/RAD25/XPB C-terminal helicase LTnewLM_29 Pfam protein_match 218533 218835 . - . Parent=LTnewLM_290011300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_29 Pfam protein_match 219253 219729 . - . Parent=LTnewLM_290011300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_29 Pfam protein_match 219328 219690 . - . Parent=LTnewLM_290011300.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 ### LTnewLM_29 AUGUSTUS gene 222066 223802 1 - . ID=LTnewLM_290011400 LTnewLM_29 AUGUSTUS mRNA 222066 223802 1 - . ID=LTnewLM_290011400.1;Parent=LTnewLM_290011400 LTnewLM_29 AUGUSTUS CDS 222066 223802 1 - 0 ID=LTnewLM_290011400.1:CDS:1;Parent=LTnewLM_290011400.1 ### LTnewLM_29 . polypeptide 222066 223802 . - . ID=LTnewLM_290011400.1:pep;Derives_from=LTnewLM_290011400.1;orthologous_to=LmjF.29.0600_mRNA;ortholog_cluster=OG0003762;product=term%3DNF-X1 type zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01422;Ontology_term=GO:0005634,GO:0006355,GO:0008270,GO:0003700 LTnewLM_29 Pfam protein_match 222138 222167 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_29 Pfam protein_match 222468 222518 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_29 Pfam protein_match 222780 222833 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_29 Pfam protein_match 222957 223007 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_29 Pfam protein_match 223197 223250 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 LTnewLM_29 Pfam protein_match 223362 223412 . - . Parent=LTnewLM_290011400.1:pep;Name=PF01422;signature_desc=NF-X1 type zinc finger;Ontology_term=GO:0003700,GO:0008270,GO:0006355,GO:0005634 ### LTnewLM_29 AUGUSTUS gene 225215 227110 1 - . ID=LTnewLM_290011500 LTnewLM_29 AUGUSTUS mRNA 225215 227110 1 - . ID=LTnewLM_290011500.1;Parent=LTnewLM_290011500 LTnewLM_29 AUGUSTUS CDS 225215 227110 1 - 0 ID=LTnewLM_290011500.1:CDS:1;Parent=LTnewLM_290011500.1 ### LTnewLM_29 . polypeptide 225215 227110 . - . ID=LTnewLM_290011500.1:pep;Derives_from=LTnewLM_290011500.1;orthologous_to=LmjF.29.0610_mRNA;ortholog_cluster=OG0003763;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13696 LTnewLM_29 Pfam protein_match 225833 225892 . - . Parent=LTnewLM_290011500.1:pep;Name=PF13696;signature_desc=Zinc knuckle ### LTnewLM_29 AUGUSTUS gene 231621 237221 1 - . ID=LTnewLM_290011600 LTnewLM_29 AUGUSTUS mRNA 231621 237221 1 - . ID=LTnewLM_290011600.1;Parent=LTnewLM_290011600 LTnewLM_29 AUGUSTUS CDS 231621 237221 1 - 0 ID=LTnewLM_290011600.1:CDS:1;Parent=LTnewLM_290011600.1 ### LTnewLM_29 . polypeptide 231621 237221 . - . ID=LTnewLM_290011600.1:pep;Derives_from=LTnewLM_290011600.1;orthologous_to=LmjF.29.0620_mRNA;ortholog_cluster=OG0003764;product=term%3DABC-2 family transporter protein/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12698|Pfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_29 Pfam protein_match 232131 232556 . - . Parent=LTnewLM_290011600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_29 Pfam protein_match 232782 234023 . - . Parent=LTnewLM_290011600.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein LTnewLM_29 Pfam protein_match 234732 235163 . - . Parent=LTnewLM_290011600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_29 Pfam protein_match 235566 236549 . - . Parent=LTnewLM_290011600.1:pep;Name=PF12698;signature_desc=ABC-2 family transporter protein ### LTnewLM_29 AUGUSTUS gene 242330 242749 1 - . ID=LTnewLM_290011700 LTnewLM_29 AUGUSTUS mRNA 242330 242749 1 - . ID=LTnewLM_290011700.1;Parent=LTnewLM_290011700 LTnewLM_29 AUGUSTUS CDS 242330 242749 1 - 0 ID=LTnewLM_290011700.1:CDS:1;Parent=LTnewLM_290011700.1 ### LTnewLM_29 . polypeptide 242330 242749 . - . ID=LTnewLM_290011700.1:pep;Derives_from=LTnewLM_290011700.1;orthologous_to=LmjF.29.0630_mRNA;ortholog_cluster=OG0003765;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 243489 244283 1 - . ID=LTnewLM_290011800 LTnewLM_29 AUGUSTUS mRNA 243489 244283 1 - . ID=LTnewLM_290011800.1;Parent=LTnewLM_290011800 LTnewLM_29 AUGUSTUS CDS 243489 244283 1 - 0 ID=LTnewLM_290011800.1:CDS:1;Parent=LTnewLM_290011800.1 ### LTnewLM_29 . polypeptide 243489 244283 . - . ID=LTnewLM_290011800.1:pep;Derives_from=LTnewLM_290011800.1;orthologous_to=LmjF.29.0640_mRNA;ortholog_cluster=OG0003766;product=term%3DScavenger mRNA decapping enzyme C-term binding/HIT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11969|Pfam:PF01230 LTnewLM_29 Pfam protein_match 243717 244034 . - . Parent=LTnewLM_290011800.1:pep;Name=PF11969;signature_desc=Scavenger mRNA decapping enzyme C-term binding LTnewLM_29 Pfam protein_match 243750 244031 . - . Parent=LTnewLM_290011800.1:pep;Name=PF01230;signature_desc=HIT domain ### LTnewLM_29 AUGUSTUS gene 245238 247367 1 - . ID=LTnewLM_290011900 LTnewLM_29 AUGUSTUS mRNA 245238 247367 1 - . ID=LTnewLM_290011900.1;Parent=LTnewLM_290011900 LTnewLM_29 AUGUSTUS CDS 245238 247367 1 - 0 ID=LTnewLM_290011900.1:CDS:1;Parent=LTnewLM_290011900.1 ### LTnewLM_29 . polypeptide 245238 247367 . - . ID=LTnewLM_290011900.1:pep;Derives_from=LTnewLM_290011900.1;orthologous_to=LmjF.29.0650_mRNA;ortholog_cluster=OG0003767;product=term%3DPhosphate transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01384;Ontology_term=GO:0006817,GO:0016020,GO:0005315 LTnewLM_29 Pfam protein_match 245286 247274 . - . Parent=LTnewLM_290011900.1:pep;Name=PF01384;signature_desc=Phosphate transporter family;Ontology_term=GO:0005315,GO:0006817,GO:0016020 ### LTnewLM_29 Liftoff gene 249199 250980 . - . ID=LTnewLM_290012000;coverage=1.0;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0660_0 LTnewLM_29 Liftoff mRNA 249199 250980 . - . ID=LTnewLM_290012000.1;Parent=LTnewLM_290012000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 249199 250980 . - 0 ID=LTnewLM_290012000.1:CDS:1;Parent=LTnewLM_290012000.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 249199 250980 . - . ID=LTnewLM_290012000.1:pep;Derives_from=LTnewLM_290012000.1;orthologous_to=LmjF.29.0660_mRNA;ortholog_cluster=OG0003768;product=term%3DRadial spokehead-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04712 LTnewLM_29 Pfam protein_match 249271 250968 . - . Parent=LTnewLM_290012000.1:pep;Name=PF04712;signature_desc=Radial spokehead-like protein ### LTnewLM_29 AUGUSTUS gene 252043 252459 1 - . ID=LTnewLM_290012100 LTnewLM_29 AUGUSTUS mRNA 252043 252459 1 - . ID=LTnewLM_290012100.1;Parent=LTnewLM_290012100 LTnewLM_29 AUGUSTUS CDS 252043 252459 1 - 0 ID=LTnewLM_290012100.1:CDS:1;Parent=LTnewLM_290012100.1 ### LTnewLM_29 . polypeptide 252043 252459 . - . ID=LTnewLM_290012100.1:pep;Derives_from=LTnewLM_290012100.1;orthologous_to=LmjF.29.0670_mRNA;ortholog_cluster=OG0003769;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 253186 255470 . - . ID=LTnewLM_290012200:pseudogene;coverage=0.995;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0680_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 253186 255470 . - . ID=LTnewLM_290012200.1;Parent=LTnewLM_290012200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 253186 255470 . - . ID=LTnewLM_290012200.1:pseudogenic_exon:1;Parent=LTnewLM_290012200.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 253186 255470 . - . ID=LTnewLM_290012200.1:pep;Derives_from=LTnewLM_290012200.1;orthologous_to=LmjF.29.0680_mRNA;ortholog_cluster=OG0007578;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 256130 256966 1 - . ID=LTnewLM_290012300 LTnewLM_29 AUGUSTUS mRNA 256130 256966 1 - . ID=LTnewLM_290012300.1;Parent=LTnewLM_290012300 LTnewLM_29 AUGUSTUS CDS 256130 256966 1 - 0 ID=LTnewLM_290012300.1:CDS:1;Parent=LTnewLM_290012300.1 ### LTnewLM_29 . polypeptide 256130 256966 . - . ID=LTnewLM_290012300.1:pep;Derives_from=LTnewLM_290012300.1;orthologous_to=LmjF.29.0690_mRNA;ortholog_cluster=OG0003770;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 258464 260582 0.46 - . ID=LTnewLM_290012400 LTnewLM_29 AUGUSTUS mRNA 258464 260582 0.46 - . ID=LTnewLM_290012400.1;Parent=LTnewLM_290012400 LTnewLM_29 AUGUSTUS CDS 258464 258568 0.56 - 0 ID=LTnewLM_290012400.1:CDS:1;Parent=LTnewLM_290012400.1 LTnewLM_29 AUGUSTUS CDS 258612 260582 0.73 - 0 ID=LTnewLM_290012400.1:CDS:2;Parent=LTnewLM_290012400.1 ### LTnewLM_29 . polypeptide 258464 260582 . - . ID=LTnewLM_290012400.1:pep;Derives_from=LTnewLM_290012400.1;orthologous_to=LmjF.29.0700_mRNA;ortholog_cluster=OG0003771;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 261580 264147 1 - . ID=LTnewLM_290012500 LTnewLM_29 AUGUSTUS mRNA 261580 264147 1 - . ID=LTnewLM_290012500.1;Parent=LTnewLM_290012500 LTnewLM_29 AUGUSTUS CDS 261580 264147 1 - 0 ID=LTnewLM_290012500.1:CDS:1;Parent=LTnewLM_290012500.1 ### LTnewLM_29 . polypeptide 261580 264147 . - . ID=LTnewLM_290012500.1:pep;Derives_from=LTnewLM_290012500.1;orthologous_to=LmjF.29.0710_mRNA;ortholog_cluster=OG0003772;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 265533 266363 1 - . ID=LTnewLM_290012600 LTnewLM_29 AUGUSTUS mRNA 265533 266363 1 - . ID=LTnewLM_290012600.1;Parent=LTnewLM_290012600 LTnewLM_29 AUGUSTUS CDS 265533 266363 1 - 0 ID=LTnewLM_290012600.1:CDS:1;Parent=LTnewLM_290012600.1 ### LTnewLM_29 . polypeptide 265533 266363 . - . ID=LTnewLM_290012600.1:pep;Derives_from=LTnewLM_290012600.1;orthologous_to=LmjF.29.0720_mRNA;ortholog_cluster=OG0003773;product=term%3DElongation factor TS%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00889;Ontology_term=GO:0003746,GO:0005622,GO:0006414 LTnewLM_29 Pfam protein_match 265695 266105 . - . Parent=LTnewLM_290012600.1:pep;Name=PF00889;signature_desc=Elongation factor TS;Ontology_term=GO:0003746,GO:0006414,GO:0005622 ### LTnewLM_29 AUGUSTUS gene 268575 269255 1 - . ID=LTnewLM_290012700 LTnewLM_29 AUGUSTUS mRNA 268575 269255 1 - . ID=LTnewLM_290012700.1;Parent=LTnewLM_290012700 LTnewLM_29 AUGUSTUS CDS 268575 269255 1 - 0 ID=LTnewLM_290012700.1:CDS:1;Parent=LTnewLM_290012700.1 ### LTnewLM_29 . polypeptide 268575 269255 . - . ID=LTnewLM_290012700.1:pep;Derives_from=LTnewLM_290012700.1;orthologous_to=LmjF.29.0730_mRNA;ortholog_cluster=OG0003774;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 270683 271804 1 - . ID=LTnewLM_290012800 LTnewLM_29 AUGUSTUS mRNA 270683 271804 1 - . ID=LTnewLM_290012800.1;Parent=LTnewLM_290012800 LTnewLM_29 AUGUSTUS CDS 270683 271804 1 - 0 ID=LTnewLM_290012800.1:CDS:1;Parent=LTnewLM_290012800.1 ### LTnewLM_29 . polypeptide 270683 271804 . - . ID=LTnewLM_290012800.1:pep;Derives_from=LTnewLM_290012800.1;orthologous_to=LmjF.29.0740_mRNA;ortholog_cluster=OG0003775;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 270983 271096 . - . Parent=LTnewLM_290012800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 271115 271219 . - . Parent=LTnewLM_290012800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 271250 271342 . - . Parent=LTnewLM_290012800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_29 AUGUSTUS gene 273150 273899 1 - . ID=LTnewLM_290012900 LTnewLM_29 AUGUSTUS mRNA 273150 273899 1 - . ID=LTnewLM_290012900.1;Parent=LTnewLM_290012900 LTnewLM_29 AUGUSTUS CDS 273150 273899 1 - 0 ID=LTnewLM_290012900.1:CDS:1;Parent=LTnewLM_290012900.1 ### LTnewLM_29 . polypeptide 273150 273899 . - . ID=LTnewLM_290012900.1:pep;Derives_from=LTnewLM_290012900.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 275111 277138 1 - . ID=LTnewLM_290013000 LTnewLM_29 AUGUSTUS mRNA 275111 277138 1 - . ID=LTnewLM_290013000.1;Parent=LTnewLM_290013000 LTnewLM_29 AUGUSTUS CDS 275111 277138 1 - 0 ID=LTnewLM_290013000.1:CDS:1;Parent=LTnewLM_290013000.1 ### LTnewLM_29 . polypeptide 275111 277138 . - . ID=LTnewLM_290013000.1:pep;Derives_from=LTnewLM_290013000.1;orthologous_to=LmjF.29.0750_mRNA;ortholog_cluster=OG0003776;product=term%3DMpp10 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04006;Ontology_term=GO:0006364,GO:0034457,GO:0005732,GO:0005634 LTnewLM_29 Pfam protein_match 275171 276877 . - . Parent=LTnewLM_290013000.1:pep;Name=PF04006;signature_desc=Mpp10 protein;Ontology_term=GO:0006364,GO:0005634,GO:0005732,GO:0034457 ### LTnewLM_29 AUGUSTUS gene 279081 281396 1 - . ID=LTnewLM_290013100 LTnewLM_29 AUGUSTUS mRNA 279081 281396 1 - . ID=LTnewLM_290013100.1;Parent=LTnewLM_290013100 LTnewLM_29 AUGUSTUS CDS 279081 281396 1 - 0 ID=LTnewLM_290013100.1:CDS:1;Parent=LTnewLM_290013100.1 ### LTnewLM_29 . polypeptide 279081 281396 . - . ID=LTnewLM_290013100.1:pep;Derives_from=LTnewLM_290013100.1;orthologous_to=LmjF.29.0760_mRNA;ortholog_cluster=OG0003777;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02518|Pfam:PF13589|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_29 Pfam protein_match 279147 280736 . - . Parent=LTnewLM_290013100.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_29 Pfam protein_match 280752 281234 . - . Parent=LTnewLM_290013100.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_29 Pfam protein_match 280845 281228 . - . Parent=LTnewLM_290013100.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_29 AUGUSTUS gene 282547 283122 1 - . ID=LTnewLM_290013200 LTnewLM_29 AUGUSTUS mRNA 282547 283122 1 - . ID=LTnewLM_290013200.1;Parent=LTnewLM_290013200 LTnewLM_29 AUGUSTUS CDS 282547 283122 1 - 0 ID=LTnewLM_290013200.1:CDS:1;Parent=LTnewLM_290013200.1 ### LTnewLM_29 . polypeptide 282547 283122 . - . ID=LTnewLM_290013200.1:pep;Derives_from=LTnewLM_290013200.1;orthologous_to=LmjF.29.0770_mRNA;ortholog_cluster=OG0003778;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 286406 288211 1 - . ID=LTnewLM_290013300 LTnewLM_29 AUGUSTUS mRNA 286406 288211 1 - . ID=LTnewLM_290013300.1;Parent=LTnewLM_290013300 LTnewLM_29 AUGUSTUS CDS 286406 288211 1 - 0 ID=LTnewLM_290013300.1:CDS:1;Parent=LTnewLM_290013300.1 ### LTnewLM_29 . polypeptide 286406 288211 . - . ID=LTnewLM_290013300.1:pep;Derives_from=LTnewLM_290013300.1;orthologous_to=LmjF.29.0780_mRNA;ortholog_cluster=OG0003779;product=term%3DU-box domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04564;Ontology_term=GO:0004842,GO:0016567 LTnewLM_29 Pfam protein_match 286475 286654 . - . Parent=LTnewLM_290013300.1:pep;Name=PF04564;signature_desc=U-box domain;Ontology_term=GO:0004842,GO:0016567 ### LTnewLM_29 AUGUSTUS gene 290177 294946 1 - . ID=LTnewLM_290013400 LTnewLM_29 AUGUSTUS mRNA 290177 294946 1 - . ID=LTnewLM_290013400.1;Parent=LTnewLM_290013400 LTnewLM_29 AUGUSTUS CDS 290177 294946 1 - 0 ID=LTnewLM_290013400.1:CDS:1;Parent=LTnewLM_290013400.1 ### LTnewLM_29 . polypeptide 290177 294946 . - . ID=LTnewLM_290013400.1:pep;Derives_from=LTnewLM_290013400.1;orthologous_to=LmjF.29.0790_mRNA;ortholog_cluster=OG0003780;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 295841 297787 1 - . ID=LTnewLM_290013500 LTnewLM_29 AUGUSTUS mRNA 295841 297787 1 - . ID=LTnewLM_290013500.1;Parent=LTnewLM_290013500 LTnewLM_29 AUGUSTUS CDS 295841 297787 1 - 0 ID=LTnewLM_290013500.1:CDS:1;Parent=LTnewLM_290013500.1 ### LTnewLM_29 . polypeptide 295841 297787 . - . ID=LTnewLM_290013500.1:pep;Derives_from=LTnewLM_290013500.1;orthologous_to=LmjF.29.0800_mRNA;ortholog_cluster=OG0003781;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 299389 301173 1 - . ID=LTnewLM_290013600 LTnewLM_29 AUGUSTUS mRNA 299389 301173 1 - . ID=LTnewLM_290013600.1;Parent=LTnewLM_290013600 LTnewLM_29 AUGUSTUS CDS 299389 301173 1 - 0 ID=LTnewLM_290013600.1:CDS:1;Parent=LTnewLM_290013600.1 ### LTnewLM_29 . polypeptide 299389 301173 . - . ID=LTnewLM_290013600.1:pep;Derives_from=LTnewLM_290013600.1;orthologous_to=LmjF.29.0805_mRNA;ortholog_cluster=OG0003782;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 302124 303980 1 - . ID=LTnewLM_290013700 LTnewLM_29 AUGUSTUS mRNA 302124 303980 1 - . ID=LTnewLM_290013700.1;Parent=LTnewLM_290013700 LTnewLM_29 AUGUSTUS CDS 302124 303980 1 - 0 ID=LTnewLM_290013700.1:CDS:1;Parent=LTnewLM_290013700.1 ### LTnewLM_29 . polypeptide 302124 303980 . - . ID=LTnewLM_290013700.1:pep;Derives_from=LTnewLM_290013700.1;orthologous_to=LmjF.29.0810_mRNA;ortholog_cluster=OG0003783;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 307781 308803 1 - . ID=LTnewLM_290013800 LTnewLM_29 AUGUSTUS mRNA 307781 308803 1 - . ID=LTnewLM_290013800.1;Parent=LTnewLM_290013800 LTnewLM_29 AUGUSTUS CDS 307781 308803 1 - 0 ID=LTnewLM_290013800.1:CDS:1;Parent=LTnewLM_290013800.1 ### LTnewLM_29 . polypeptide 307781 308803 . - . ID=LTnewLM_290013800.1:pep;Derives_from=LTnewLM_290013800.1;orthologous_to=LmjF.29.0820_mRNA;ortholog_cluster=OG0003784;product=term%3DPapain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00112;Ontology_term=GO:0008234,GO:0006508 LTnewLM_29 Pfam protein_match 307805 308512 . - . Parent=LTnewLM_290013800.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 ### LTnewLM_29 AUGUSTUS gene 310098 311552 1 - . ID=LTnewLM_290013900 LTnewLM_29 AUGUSTUS mRNA 310098 311552 1 - . ID=LTnewLM_290013900.1;Parent=LTnewLM_290013900 LTnewLM_29 AUGUSTUS CDS 310098 311552 1 - 0 ID=LTnewLM_290013900.1:CDS:1;Parent=LTnewLM_290013900.1 ### LTnewLM_29 . polypeptide 310098 311552 . - . ID=LTnewLM_290013900.1:pep;Derives_from=LTnewLM_290013900.1;orthologous_to=LmjF.29.0830_mRNA;ortholog_cluster=OG0003785;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 312817 313992 1 - . ID=LTnewLM_290014000 LTnewLM_29 AUGUSTUS mRNA 312817 313992 1 - . ID=LTnewLM_290014000.1;Parent=LTnewLM_290014000 LTnewLM_29 AUGUSTUS CDS 312817 313992 1 - 0 ID=LTnewLM_290014000.1:CDS:1;Parent=LTnewLM_290014000.1 ### LTnewLM_29 . polypeptide 312817 313992 . - . ID=LTnewLM_290014000.1:pep;Derives_from=LTnewLM_290014000.1;orthologous_to=LmjF.29.0840_mRNA;ortholog_cluster=OG0003786;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 316209 317117 1 - . ID=LTnewLM_290014100 LTnewLM_29 AUGUSTUS mRNA 316209 317117 1 - . ID=LTnewLM_290014100.1;Parent=LTnewLM_290014100 LTnewLM_29 AUGUSTUS CDS 316209 317117 1 - 0 ID=LTnewLM_290014100.1:CDS:1;Parent=LTnewLM_290014100.1 ### LTnewLM_29 . polypeptide 316209 317117 . - . ID=LTnewLM_290014100.1:pep;Derives_from=LTnewLM_290014100.1;orthologous_to=LmjF.29.0850_mRNA;ortholog_cluster=OG0003787;product=term%3DHMG (high mobility group) box/HMG-box domain/Protamine and protamine like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00505|Pfam:PF09011|Pfam:PF06382 LTnewLM_29 Pfam protein_match 316311 316490 . - . Parent=LTnewLM_290014100.1:pep;Name=PF00505;signature_desc=HMG (high mobility group) box LTnewLM_29 Pfam protein_match 316314 316496 . - . Parent=LTnewLM_290014100.1:pep;Name=PF09011;signature_desc=HMG-box domain LTnewLM_29 Pfam protein_match 316332 316562 . - . Parent=LTnewLM_290014100.1:pep;Name=PF06382;signature_desc=Protamine and protamine like LTnewLM_29 Pfam protein_match 316572 316772 . - . Parent=LTnewLM_290014100.1:pep;Name=PF00505;signature_desc=HMG (high mobility group) box LTnewLM_29 Pfam protein_match 316572 316772 . - . Parent=LTnewLM_290014100.1:pep;Name=PF09011;signature_desc=HMG-box domain ### LTnewLM_29 AUGUSTUS gene 319283 321134 0.78 - . ID=LTnewLM_290014200 LTnewLM_29 AUGUSTUS mRNA 319283 321134 0.78 - . ID=LTnewLM_290014200.1;Parent=LTnewLM_290014200 LTnewLM_29 AUGUSTUS CDS 319283 319696 0.92 - 0 ID=LTnewLM_290014200.1:CDS:1;Parent=LTnewLM_290014200.1 LTnewLM_29 AUGUSTUS CDS 321099 321134 0.78 - 0 ID=LTnewLM_290014200.1:CDS:2;Parent=LTnewLM_290014200.1 ### LTnewLM_29 . polypeptide 319283 321134 . - . ID=LTnewLM_290014200.1:pep;Derives_from=LTnewLM_290014200.1;product=term%3Dhypothetical protein ### LTnewLM_29 . pseudogene 322283 324186 . - . ID=LTnewLM_290014300:pseudogene;coverage=0.990;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.0860_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 322283 324186 . - . ID=LTnewLM_290014300.1;Parent=LTnewLM_290014300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 322283 324186 . - . ID=LTnewLM_290014300.1:pseudogenic_exon:1;Parent=LTnewLM_290014300.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 322283 324186 . - . ID=LTnewLM_290014300.1:pep;Derives_from=LTnewLM_290014300.1;orthologous_to=LmjF.29.0860_mRNA;ortholog_cluster=OG0007579;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 324823 325167 1 - . ID=LTnewLM_290014400 LTnewLM_29 AUGUSTUS mRNA 324823 325167 1 - . ID=LTnewLM_290014400.1;Parent=LTnewLM_290014400 LTnewLM_29 AUGUSTUS CDS 324823 325167 1 - 0 ID=LTnewLM_290014400.1:CDS:1;Parent=LTnewLM_290014400.1 ### LTnewLM_29 . polypeptide 324823 325167 . - . ID=LTnewLM_290014400.1:pep;Derives_from=LTnewLM_290014400.1;orthologous_to=LmjF.29.0865_mRNA;ortholog_cluster=OG0003788;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 324937 325098 . - . Parent=LTnewLM_290014400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 AUGUSTUS gene 326152 327516 1 - . ID=LTnewLM_290014500 LTnewLM_29 AUGUSTUS mRNA 326152 327516 1 - . ID=LTnewLM_290014500.1;Parent=LTnewLM_290014500 LTnewLM_29 AUGUSTUS CDS 326152 327516 1 - 0 ID=LTnewLM_290014500.1:CDS:1;Parent=LTnewLM_290014500.1 ### LTnewLM_29 . polypeptide 326152 327516 . - . ID=LTnewLM_290014500.1:pep;Derives_from=LTnewLM_290014500.1;orthologous_to=LmjF.29.0867_mRNA;ortholog_cluster=OG0003789;product=term%3DAmidohydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01979;Ontology_term=GO:0016787 LTnewLM_29 Pfam protein_match 326167 327315 . - . Parent=LTnewLM_290014500.1:pep;Name=PF01979;signature_desc=Amidohydrolase family;Ontology_term=GO:0016787 ### LTnewLM_29 AUGUSTUS gene 329785 330291 1 - . ID=LTnewLM_290014600 LTnewLM_29 AUGUSTUS mRNA 329785 330291 1 - . ID=LTnewLM_290014600.1;Parent=LTnewLM_290014600 LTnewLM_29 AUGUSTUS CDS 329785 330291 1 - 0 ID=LTnewLM_290014600.1:CDS:1;Parent=LTnewLM_290014600.1 ### LTnewLM_29 . polypeptide 329785 330291 . - . ID=LTnewLM_290014600.1:pep;Derives_from=LTnewLM_290014600.1;orthologous_to=LmjF.29.0868_mRNA;ortholog_cluster=OG0003790;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_29 Pfam protein_match 330112 330237 . - . Parent=LTnewLM_290014600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_29 AUGUSTUS gene 334057 334377 0.69 + . ID=LTnewLM_290014700 LTnewLM_29 AUGUSTUS mRNA 334057 334377 0.69 + . ID=LTnewLM_290014700.1;Parent=LTnewLM_290014700 LTnewLM_29 AUGUSTUS CDS 334057 334377 0.69 + 0 ID=LTnewLM_290014700.1:CDS:1;Parent=LTnewLM_290014700.1 ### LTnewLM_29 . polypeptide 334057 334377 . + . ID=LTnewLM_290014700.1:pep;Derives_from=LTnewLM_290014700.1;orthologous_to=LTnewLM_170012800.1,LTnewLM_290014900.1;ortholog_cluster=OG0000354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 334639 334905 0.73 + . ID=LTnewLM_290014800 LTnewLM_29 AUGUSTUS mRNA 334639 334905 0.73 + . ID=LTnewLM_290014800.1;Parent=LTnewLM_290014800 LTnewLM_29 AUGUSTUS CDS 334639 334905 0.73 + 0 ID=LTnewLM_290014800.1:CDS:1;Parent=LTnewLM_290014800.1 ### LTnewLM_29 . polypeptide 334639 334905 . + . ID=LTnewLM_290014800.1:pep;Derives_from=LTnewLM_290014800.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 335795 336115 0.89 + . ID=LTnewLM_290014900 LTnewLM_29 AUGUSTUS mRNA 335795 336115 0.89 + . ID=LTnewLM_290014900.1;Parent=LTnewLM_290014900 LTnewLM_29 AUGUSTUS CDS 335795 336115 0.89 + 0 ID=LTnewLM_290014900.1:CDS:1;Parent=LTnewLM_290014900.1 ### LTnewLM_29 . polypeptide 335795 336115 . + . ID=LTnewLM_290014900.1:pep;Derives_from=LTnewLM_290014900.1;orthologous_to=LTnewLM_170012800.1,LTnewLM_290014700.1;ortholog_cluster=OG0000354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 336488 337963 1 - . ID=LTnewLM_290015000 LTnewLM_29 AUGUSTUS mRNA 336488 337963 1 - . ID=LTnewLM_290015000.1;Parent=LTnewLM_290015000 LTnewLM_29 AUGUSTUS CDS 336488 337963 1 - 0 ID=LTnewLM_290015000.1:CDS:1;Parent=LTnewLM_290015000.1 ### LTnewLM_29 . polypeptide 336488 337963 . - . ID=LTnewLM_290015000.1:pep;Derives_from=LTnewLM_290015000.1;orthologous_to=LmjF.29.0870_mRNA;ortholog_cluster=OG0003791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 338552 339091 1 - . ID=LTnewLM_290015100 LTnewLM_29 AUGUSTUS mRNA 338552 339091 1 - . ID=LTnewLM_290015100.1;Parent=LTnewLM_290015100 LTnewLM_29 AUGUSTUS CDS 338552 339091 1 - 0 ID=LTnewLM_290015100.1:CDS:1;Parent=LTnewLM_290015100.1 ### LTnewLM_29 . polypeptide 338552 339091 . - . ID=LTnewLM_290015100.1:pep;Derives_from=LTnewLM_290015100.1;orthologous_to=LmjF.29.0880_mRNA;ortholog_cluster=OG0003792;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Gtr1/RagA G protein conserved region/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF04670|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_29 Pfam protein_match 338567 339037 . - . Parent=LTnewLM_290015100.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_29 Pfam protein_match 338570 339082 . - . Parent=LTnewLM_290015100.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_29 Pfam protein_match 338666 339046 . - . Parent=LTnewLM_290015100.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_29 Pfam protein_match 338693 339040 . - . Parent=LTnewLM_290015100.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_29 Pfam protein_match 338711 339037 . - . Parent=LTnewLM_290015100.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_29 Pfam protein_match 338717 339037 . - . Parent=LTnewLM_290015100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_29 Liftoff gene 339523 340572 . - . ID=LTnewLM_290015200;coverage=1.0;sequence_ID=0.952;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.0885_0 LTnewLM_29 Liftoff mRNA 339523 340572 . - . ID=LTnewLM_290015200.1;Parent=LTnewLM_290015200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 339523 340572 . - 0 ID=LTnewLM_290015200.1:CDS:1;Parent=LTnewLM_290015200.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 339523 340572 . - . ID=LTnewLM_290015200.1:pep;Derives_from=LTnewLM_290015200.1;orthologous_to=LmjF.29.0885_mRNA;ortholog_cluster=OG0003793;product=term%3DPhytanoyl-CoA dioxygenase (PhyH)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05721 LTnewLM_29 Pfam protein_match 339700 340317 . - . Parent=LTnewLM_290015200.1:pep;Name=PF05721;signature_desc=Phytanoyl-CoA dioxygenase (PhyH) ### LTnewLM_29 AUGUSTUS gene 346821 348179 1 + . ID=LTnewLM_290015300 LTnewLM_29 AUGUSTUS mRNA 346821 348179 1 + . ID=LTnewLM_290015300.1;Parent=LTnewLM_290015300 LTnewLM_29 AUGUSTUS CDS 346821 348179 1 + 0 ID=LTnewLM_290015300.1:CDS:1;Parent=LTnewLM_290015300.1 ### LTnewLM_29 . polypeptide 346821 348179 . + . ID=LTnewLM_290015300.1:pep;Derives_from=LTnewLM_290015300.1;orthologous_to=LmjF.29.0890_mRNA;ortholog_cluster=OG0003794;product=term%3DSolute carrier family 35/CRT-like%2C chloroquine-resistance transporter-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06027|Pfam:PF08627;Ontology_term=GO:0006810,GO:0016021 LTnewLM_29 Pfam protein_match 346857 347423 . + . Parent=LTnewLM_290015300.1:pep;Name=PF06027;signature_desc=Solute carrier family 35;Ontology_term=GO:0006810,GO:0016021 LTnewLM_29 Pfam protein_match 346932 347408 . + . Parent=LTnewLM_290015300.1:pep;Name=PF08627;signature_desc=CRT-like%2C chloroquine-resistance transporter-like LTnewLM_29 Pfam protein_match 347595 347927 . + . Parent=LTnewLM_290015300.1:pep;Name=PF06027;signature_desc=Solute carrier family 35;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_29 Liftoff gene 348482 349890 . + . ID=LTnewLM_290015400;coverage=1.0;sequence_ID=0.954;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.29.0900_0 LTnewLM_29 Liftoff mRNA 348482 349890 . + . ID=LTnewLM_290015400.1;Parent=LTnewLM_290015400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff five_prime_UTR 348482 348534 . + . ID=LTnewLM_290015400:five_prime_UTR;Parent=LTnewLM_290015400.1;extra_copy_number=0 LTnewLM_29 Liftoff CDS 348535 349890 . + 0 ID=LTnewLM_290015400.1:CDS:1;Parent=LTnewLM_290015400.1;extra_copy_number=0 LTnewLM_29 Liftoff mRNA 348545 349890 . + . ID=LTnewLM_290015400.2;Parent=LTnewLM_290015400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff five_prime_UTR 348545 349242 . + . ID=LTnewLM_290015400:five_prime_UTR.1;Parent=LTnewLM_290015400.2;extra_copy_number=0 LTnewLM_29 Liftoff CDS 349243 349890 . + 0 ID=LTnewLM_290015400.2:CDS:1;Parent=LTnewLM_290015400.2;extra_copy_number=0 ### LTnewLM_29 . polypeptide 348535 349890 . + . ID=LTnewLM_290015400.1:pep;Derives_from=LTnewLM_290015400.1;orthologous_to=LmjF.29.0900.1_mRNA;ortholog_cluster=OG0003795;product=term%3DZeta toxin/IPP transferase/Zinc-finger of C2H2 type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06414|Pfam:PF01715|Pfam:PF12874;Ontology_term=GO:0008033,GO:0016301,GO:0005524 LTnewLM_29 Pfam protein_match 348556 348681 . + . Parent=LTnewLM_290015400.1:pep;Name=PF06414;signature_desc=Zeta toxin;Ontology_term=GO:0005524,GO:0016301 LTnewLM_29 Pfam protein_match 348844 349518 . + . Parent=LTnewLM_290015400.1:pep;Name=PF01715;signature_desc=IPP transferase;Ontology_term=GO:0008033 LTnewLM_29 Pfam protein_match 349726 349794 . + . Parent=LTnewLM_290015400.1:pep;Name=PF12874;signature_desc=Zinc-finger of C2H2 type ### LTnewLM_29 . polypeptide 349243 349890 . + . ID=LTnewLM_290015400.2:pep;Derives_from=LTnewLM_290015400.2;orthologous_to=LmjF.29.0900.2_mRNA;ortholog_cluster=OG0003796;product=term%3DIPP transferase/Zinc-finger of C2H2 type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01715|Pfam:PF12874;Ontology_term=GO:0008033 LTnewLM_29 Pfam protein_match 349246 349518 . + . Parent=LTnewLM_290015400.2:pep;Name=PF01715;signature_desc=IPP transferase;Ontology_term=GO:0008033 LTnewLM_29 Pfam protein_match 349726 349794 . + . Parent=LTnewLM_290015400.2:pep;Name=PF12874;signature_desc=Zinc-finger of C2H2 type ### LTnewLM_29 AUGUSTUS gene 350313 351332 0.96 + . ID=LTnewLM_290015500 LTnewLM_29 AUGUSTUS mRNA 350313 351332 0.96 + . ID=LTnewLM_290015500.1;Parent=LTnewLM_290015500 LTnewLM_29 AUGUSTUS CDS 350313 351332 0.96 + 0 ID=LTnewLM_290015500.1:CDS:1;Parent=LTnewLM_290015500.1 ### LTnewLM_29 . polypeptide 350313 351332 . + . ID=LTnewLM_290015500.1:pep;Derives_from=LTnewLM_290015500.1;orthologous_to=LmjF.29.0910_mRNA;ortholog_cluster=OG0003797;product=term%3DSignal peptide peptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04258;Ontology_term=GO:0004190,GO:0016021 LTnewLM_29 Pfam protein_match 350427 350594 . + . Parent=LTnewLM_290015500.1:pep;Name=PF04258;signature_desc=Signal peptide peptidase;Ontology_term=GO:0004190,GO:0016021 LTnewLM_29 Pfam protein_match 350601 351146 . + . Parent=LTnewLM_290015500.1:pep;Name=PF04258;signature_desc=Signal peptide peptidase;Ontology_term=GO:0004190,GO:0016021 ### LTnewLM_29 AUGUSTUS gene 351909 353417 1 + . ID=LTnewLM_290015600 LTnewLM_29 AUGUSTUS mRNA 351909 353417 1 + . ID=LTnewLM_290015600.1;Parent=LTnewLM_290015600 LTnewLM_29 AUGUSTUS CDS 351909 353417 1 + 0 ID=LTnewLM_290015600.1:CDS:1;Parent=LTnewLM_290015600.1 ### LTnewLM_29 . polypeptide 351909 353417 . + . ID=LTnewLM_290015600.1:pep;Derives_from=LTnewLM_290015600.1;orthologous_to=LmjF.29.0920_mRNA;ortholog_cluster=OG0003798;product=term%3DLETM1-like%2C RBD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07766 LTnewLM_29 Pfam protein_match 352140 352823 . + . Parent=LTnewLM_290015600.1:pep;Name=PF07766;signature_desc=LETM1-like%2C RBD ### LTnewLM_29 AUGUSTUS gene 355430 357592 1 + . ID=LTnewLM_290015700 LTnewLM_29 AUGUSTUS mRNA 355430 357592 1 + . ID=LTnewLM_290015700.1;Parent=LTnewLM_290015700 LTnewLM_29 AUGUSTUS CDS 355430 357592 1 + 0 ID=LTnewLM_290015700.1:CDS:1;Parent=LTnewLM_290015700.1 ### LTnewLM_29 . polypeptide 355430 357592 . + . ID=LTnewLM_290015700.1:pep;Derives_from=LTnewLM_290015700.1;orthologous_to=LmjF.29.0930_mRNA;ortholog_cluster=OG0003799;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 358138 358665 1 + . ID=LTnewLM_290015800 LTnewLM_29 AUGUSTUS mRNA 358138 358665 1 + . ID=LTnewLM_290015800.1;Parent=LTnewLM_290015800 LTnewLM_29 AUGUSTUS CDS 358138 358665 1 + 0 ID=LTnewLM_290015800.1:CDS:1;Parent=LTnewLM_290015800.1 ### LTnewLM_29 . polypeptide 358138 358665 . + . ID=LTnewLM_290015800.1:pep;Derives_from=LTnewLM_290015800.1;orthologous_to=LmjF.29.0935_mRNA;ortholog_cluster=OG0003800;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 359937 362210 1 + . ID=LTnewLM_290015900 LTnewLM_29 AUGUSTUS mRNA 359937 362210 1 + . ID=LTnewLM_290015900.1;Parent=LTnewLM_290015900 LTnewLM_29 AUGUSTUS CDS 359937 362210 1 + 0 ID=LTnewLM_290015900.1:CDS:1;Parent=LTnewLM_290015900.1 ### LTnewLM_29 . polypeptide 359937 362210 . + . ID=LTnewLM_290015900.1:pep;Derives_from=LTnewLM_290015900.1;orthologous_to=LmjF.29.0940_mRNA;ortholog_cluster=OG0003801;product=term%3DSulfatase-modifying factor enzyme 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03781 LTnewLM_29 Pfam protein_match 360621 361397 . + . Parent=LTnewLM_290015900.1:pep;Name=PF03781;signature_desc=Sulfatase-modifying factor enzyme 1 ### LTnewLM_29 AUGUSTUS gene 366433 368157 1 + . ID=LTnewLM_290016000 LTnewLM_29 AUGUSTUS mRNA 366433 368157 1 + . ID=LTnewLM_290016000.1;Parent=LTnewLM_290016000 LTnewLM_29 AUGUSTUS CDS 366433 368157 1 + 0 ID=LTnewLM_290016000.1:CDS:1;Parent=LTnewLM_290016000.1 ### LTnewLM_29 . polypeptide 366433 368157 . + . ID=LTnewLM_290016000.1:pep;Derives_from=LTnewLM_290016000.1;orthologous_to=LmjF.29.0950_mRNA;ortholog_cluster=OG0003802;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 370578 371876 1 + . ID=LTnewLM_290016100 LTnewLM_29 AUGUSTUS mRNA 370578 371876 1 + . ID=LTnewLM_290016100.1;Parent=LTnewLM_290016100 LTnewLM_29 AUGUSTUS CDS 370578 371876 1 + 0 ID=LTnewLM_290016100.1:CDS:1;Parent=LTnewLM_290016100.1 ### LTnewLM_29 . polypeptide 370578 371876 . + . ID=LTnewLM_290016100.1:pep;Derives_from=LTnewLM_290016100.1;orthologous_to=LmjF.29.0960_mRNA;ortholog_cluster=OG0003803;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 Liftoff gene 375166 380358 . + . ID=LTnewLM_290016200;coverage=0.999;sequence_ID=0.966;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.0970_0 LTnewLM_29 Liftoff mRNA 375166 380358 . + . ID=LTnewLM_290016200.1;Parent=LTnewLM_290016200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 375166 380358 . + 0 ID=LTnewLM_290016200.1:CDS:1;Parent=LTnewLM_290016200.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 375166 380358 . + . ID=LTnewLM_290016200.1:pep;Derives_from=LTnewLM_290016200.1;orthologous_to=LmjF.29.0970_mRNA;ortholog_cluster=OG0003804;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_29 Pfam protein_match 375619 376494 . + . Parent=LTnewLM_290016200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_29 Pfam protein_match 375661 375918 . + . Parent=LTnewLM_290016200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_29 AUGUSTUS gene 382462 384105 1 + . ID=LTnewLM_290016300 LTnewLM_29 AUGUSTUS mRNA 382462 384105 1 + . ID=LTnewLM_290016300.1;Parent=LTnewLM_290016300 LTnewLM_29 AUGUSTUS CDS 382462 384105 1 + 0 ID=LTnewLM_290016300.1:CDS:1;Parent=LTnewLM_290016300.1 ### LTnewLM_29 . polypeptide 382462 384105 . + . ID=LTnewLM_290016300.1:pep;Derives_from=LTnewLM_290016300.1;orthologous_to=LmjF.29.0980_mRNA;ortholog_cluster=OG0003805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 385492 388470 1 + . ID=LTnewLM_290016400 LTnewLM_29 AUGUSTUS mRNA 385492 388470 1 + . ID=LTnewLM_290016400.1;Parent=LTnewLM_290016400 LTnewLM_29 AUGUSTUS CDS 385492 388470 1 + 0 ID=LTnewLM_290016400.1:CDS:1;Parent=LTnewLM_290016400.1 ### LTnewLM_29 . polypeptide 385492 388470 . + . ID=LTnewLM_290016400.1:pep;Derives_from=LTnewLM_290016400.1;orthologous_to=LmjF.29.0990_mRNA;ortholog_cluster=OG0003806;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 390523 392400 1 + . ID=LTnewLM_290016500 LTnewLM_29 AUGUSTUS mRNA 390523 392400 1 + . ID=LTnewLM_290016500.1;Parent=LTnewLM_290016500 LTnewLM_29 AUGUSTUS CDS 390523 392400 1 + 0 ID=LTnewLM_290016500.1:CDS:1;Parent=LTnewLM_290016500.1 ### LTnewLM_29 . polypeptide 390523 392400 . + . ID=LTnewLM_290016500.1:pep;Derives_from=LTnewLM_290016500.1;orthologous_to=LmjF.29.1000_mRNA;ortholog_cluster=OG0003807;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 394588 395058 1 + . ID=LTnewLM_290016600 LTnewLM_29 AUGUSTUS mRNA 394588 395058 1 + . ID=LTnewLM_290016600.1;Parent=LTnewLM_290016600 LTnewLM_29 AUGUSTUS CDS 394588 395058 1 + 0 ID=LTnewLM_290016600.1:CDS:1;Parent=LTnewLM_290016600.1 ### LTnewLM_29 . polypeptide 394588 395058 . + . ID=LTnewLM_290016600.1:pep;Derives_from=LTnewLM_290016600.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 398760 399812 1 + . ID=LTnewLM_290016700 LTnewLM_29 AUGUSTUS mRNA 398760 399812 1 + . ID=LTnewLM_290016700.1;Parent=LTnewLM_290016700 LTnewLM_29 AUGUSTUS CDS 398760 399812 1 + 0 ID=LTnewLM_290016700.1:CDS:1;Parent=LTnewLM_290016700.1 ### LTnewLM_29 . polypeptide 398760 399812 . + . ID=LTnewLM_290016700.1:pep;Derives_from=LTnewLM_290016700.1;orthologous_to=LmjF.29.1010_mRNA;ortholog_cluster=OG0003808;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_29 Pfam protein_match 398856 399029 . + . Parent=LTnewLM_290016700.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 399222 399617 . + . Parent=LTnewLM_290016700.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 399384 399749 . + . Parent=LTnewLM_290016700.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase ### LTnewLM_29 AUGUSTUS gene 401550 403724 1 + . ID=LTnewLM_290016800 LTnewLM_29 AUGUSTUS mRNA 401550 403724 1 + . ID=LTnewLM_290016800.1;Parent=LTnewLM_290016800 LTnewLM_29 AUGUSTUS CDS 401550 403724 1 + 0 ID=LTnewLM_290016800.1:CDS:1;Parent=LTnewLM_290016800.1 ### LTnewLM_29 . polypeptide 401550 403724 . + . ID=LTnewLM_290016800.1:pep;Derives_from=LTnewLM_290016800.1;orthologous_to=LmjF.29.1020_mRNA;ortholog_cluster=OG0003809;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 404442 405426 . + . ID=LTnewLM_290016900:pseudogene;coverage=0.986;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1030_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 404442 405426 . + . ID=LTnewLM_290016900.1;Parent=LTnewLM_290016900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 404442 405426 . + . ID=LTnewLM_290016900.1:pseudogenic_exon:1;Parent=LTnewLM_290016900.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 404442 405426 . + . ID=LTnewLM_290016900.1:pep;Derives_from=LTnewLM_290016900.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 407227 412923 1 + . ID=LTnewLM_290017000 LTnewLM_29 AUGUSTUS mRNA 407227 412923 1 + . ID=LTnewLM_290017000.1;Parent=LTnewLM_290017000 LTnewLM_29 AUGUSTUS CDS 407227 412923 1 + 0 ID=LTnewLM_290017000.1:CDS:1;Parent=LTnewLM_290017000.1 ### LTnewLM_29 . polypeptide 407227 412923 . + . ID=LTnewLM_290017000.1:pep;Derives_from=LTnewLM_290017000.1;orthologous_to=LmjF.29.1040_mRNA;ortholog_cluster=OG0003810;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_29 Pfam protein_match 408847 408993 . + . Parent=LTnewLM_290017000.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_29 AUGUSTUS gene 415026 417800 1 + . ID=LTnewLM_290017100 LTnewLM_29 AUGUSTUS mRNA 415026 417800 1 + . ID=LTnewLM_290017100.1;Parent=LTnewLM_290017100 LTnewLM_29 AUGUSTUS CDS 415026 417800 1 + 0 ID=LTnewLM_290017100.1:CDS:1;Parent=LTnewLM_290017100.1 ### LTnewLM_29 . polypeptide 415026 417800 . + . ID=LTnewLM_290017100.1:pep;Derives_from=LTnewLM_290017100.1;orthologous_to=LmjF.29.1050_mRNA;ortholog_cluster=OG0003811;product=term%3DKu70/Ku80 N-terminal alpha/beta domain/Ku70/Ku80 beta-barrel domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03731|Pfam:PF02735;Ontology_term=GO:0006303,GO:0003677 LTnewLM_29 Pfam protein_match 415365 415553 . + . Parent=LTnewLM_290017100.1:pep;Name=PF03731;signature_desc=Ku70/Ku80 N-terminal alpha/beta domain LTnewLM_29 Pfam protein_match 415725 415928 . + . Parent=LTnewLM_290017100.1:pep;Name=PF03731;signature_desc=Ku70/Ku80 N-terminal alpha/beta domain LTnewLM_29 Pfam protein_match 416424 417113 . + . Parent=LTnewLM_290017100.1:pep;Name=PF02735;signature_desc=Ku70/Ku80 beta-barrel domain;Ontology_term=GO:0003677,GO:0006303 ### LTnewLM_29 AUGUSTUS gene 419599 422826 1 + . ID=LTnewLM_290017200 LTnewLM_29 AUGUSTUS mRNA 419599 422826 1 + . ID=LTnewLM_290017200.1;Parent=LTnewLM_290017200 LTnewLM_29 AUGUSTUS CDS 419599 422826 1 + 0 ID=LTnewLM_290017200.1:CDS:1;Parent=LTnewLM_290017200.1 ### LTnewLM_29 . polypeptide 419599 422826 . + . ID=LTnewLM_290017200.1:pep;Derives_from=LTnewLM_290017200.1;orthologous_to=LmjF.29.1060_mRNA;ortholog_cluster=OG0003812;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 423909 425030 1 + . ID=LTnewLM_290017300 LTnewLM_29 AUGUSTUS mRNA 423909 425030 1 + . ID=LTnewLM_290017300.1;Parent=LTnewLM_290017300 LTnewLM_29 AUGUSTUS CDS 423909 425030 1 + 0 ID=LTnewLM_290017300.1:CDS:1;Parent=LTnewLM_290017300.1 ### LTnewLM_29 . polypeptide 423909 425030 . + . ID=LTnewLM_290017300.1:pep;Derives_from=LTnewLM_290017300.1;orthologous_to=LTnewLM_290017400.1,LTnewLM_290017500.1,LmjF.29.1070_mRNA,LmjF.29.1090_mRNA;ortholog_cluster=OG0000092;product=term%3DRibosomal protein L4/L1 family/60S ribosomal protein L4 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00573|Pfam:PF14374;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_29 Pfam protein_match 423972 424685 . + . Parent=LTnewLM_290017300.1:pep;Name=PF00573;signature_desc=Ribosomal protein L4/L1 family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_29 Pfam protein_match 424725 424940 . + . Parent=LTnewLM_290017300.1:pep;Name=PF14374;signature_desc=60S ribosomal protein L4 C-terminal domain ### LTnewLM_29 AUGUSTUS gene 426295 427416 1 + . ID=LTnewLM_290017400 LTnewLM_29 AUGUSTUS mRNA 426295 427416 1 + . ID=LTnewLM_290017400.1;Parent=LTnewLM_290017400 LTnewLM_29 AUGUSTUS CDS 426295 427416 1 + 0 ID=LTnewLM_290017400.1:CDS:1;Parent=LTnewLM_290017400.1 ### LTnewLM_29 . polypeptide 426295 427416 . + . ID=LTnewLM_290017400.1:pep;Derives_from=LTnewLM_290017400.1;orthologous_to=LTnewLM_290017300.1,LTnewLM_290017500.1,LmjF.29.1070_mRNA,LmjF.29.1090_mRNA;ortholog_cluster=OG0000092;product=term%3DRibosomal protein L4/L1 family/60S ribosomal protein L4 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00573|Pfam:PF14374;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_29 Pfam protein_match 426358 427071 . + . Parent=LTnewLM_290017400.1:pep;Name=PF00573;signature_desc=Ribosomal protein L4/L1 family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_29 Pfam protein_match 427111 427326 . + . Parent=LTnewLM_290017400.1:pep;Name=PF14374;signature_desc=60S ribosomal protein L4 C-terminal domain ### LTnewLM_29 AUGUSTUS gene 428682 429803 1 + . ID=LTnewLM_290017500 LTnewLM_29 AUGUSTUS mRNA 428682 429803 1 + . ID=LTnewLM_290017500.1;Parent=LTnewLM_290017500 LTnewLM_29 AUGUSTUS CDS 428682 429803 1 + 0 ID=LTnewLM_290017500.1:CDS:1;Parent=LTnewLM_290017500.1 ### LTnewLM_29 . polypeptide 428682 429803 . + . ID=LTnewLM_290017500.1:pep;Derives_from=LTnewLM_290017500.1;orthologous_to=LTnewLM_290017300.1,LTnewLM_290017400.1,LmjF.29.1070_mRNA,LmjF.29.1090_mRNA;ortholog_cluster=OG0000092;product=term%3DRibosomal protein L4/L1 family/60S ribosomal protein L4 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00573|Pfam:PF14374;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_29 Pfam protein_match 428745 429458 . + . Parent=LTnewLM_290017500.1:pep;Name=PF00573;signature_desc=Ribosomal protein L4/L1 family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_29 Pfam protein_match 429498 429713 . + . Parent=LTnewLM_290017500.1:pep;Name=PF14374;signature_desc=60S ribosomal protein L4 C-terminal domain ### LTnewLM_29 AUGUSTUS gene 430683 431765 1 + . ID=LTnewLM_290017600 LTnewLM_29 AUGUSTUS mRNA 430683 431765 1 + . ID=LTnewLM_290017600.1;Parent=LTnewLM_290017600 LTnewLM_29 AUGUSTUS CDS 430683 431765 1 + 0 ID=LTnewLM_290017600.1:CDS:1;Parent=LTnewLM_290017600.1 ### LTnewLM_29 . polypeptide 430683 431765 . + . ID=LTnewLM_290017600.1:pep;Derives_from=LTnewLM_290017600.1;orthologous_to=LmjF.29.1100_mRNA;ortholog_cluster=OG0003813;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13857|Pfam:PF12796|Pfam:PF13637|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 430719 430847 . + . Parent=LTnewLM_290017600.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_29 Pfam protein_match 430728 430889 . + . Parent=LTnewLM_290017600.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_29 Pfam protein_match 430740 430883 . + . Parent=LTnewLM_290017600.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_29 Pfam protein_match 430827 430883 . + . Parent=LTnewLM_290017600.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 430917 431177 . + . Parent=LTnewLM_290017600.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_29 Pfam protein_match 431082 431180 . + . Parent=LTnewLM_290017600.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_29 AUGUSTUS gene 433931 435808 1 + . ID=LTnewLM_290017700 LTnewLM_29 AUGUSTUS mRNA 433931 435808 1 + . ID=LTnewLM_290017700.1;Parent=LTnewLM_290017700 LTnewLM_29 AUGUSTUS CDS 433931 435808 1 + 0 ID=LTnewLM_290017700.1:CDS:1;Parent=LTnewLM_290017700.1 ### LTnewLM_29 . polypeptide 433931 435808 . + . ID=LTnewLM_290017700.1:pep;Derives_from=LTnewLM_290017700.1;orthologous_to=LmjF.29.1110_mRNA;ortholog_cluster=OG0003814;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 442267 445662 1 + . ID=LTnewLM_290017800 LTnewLM_29 AUGUSTUS mRNA 442267 445662 1 + . ID=LTnewLM_290017800.1;Parent=LTnewLM_290017800 LTnewLM_29 AUGUSTUS CDS 442267 445662 1 + 0 ID=LTnewLM_290017800.1:CDS:1;Parent=LTnewLM_290017800.1 ### LTnewLM_29 . polypeptide 442267 445662 . + . ID=LTnewLM_290017800.1:pep;Derives_from=LTnewLM_290017800.1;orthologous_to=LmjF.29.1120_mRNA;ortholog_cluster=OG0003815;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_29 Pfam protein_match 445366 445635 . + . Parent=LTnewLM_290017800.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_29 AUGUSTUS gene 449754 450869 1 + . ID=LTnewLM_290017900 LTnewLM_29 AUGUSTUS mRNA 449754 450869 1 + . ID=LTnewLM_290017900.1;Parent=LTnewLM_290017900 LTnewLM_29 AUGUSTUS CDS 449754 450869 1 + 0 ID=LTnewLM_290017900.1:CDS:1;Parent=LTnewLM_290017900.1 ### LTnewLM_29 . polypeptide 449754 450869 . + . ID=LTnewLM_290017900.1:pep;Derives_from=LTnewLM_290017900.1;orthologous_to=LmjF.29.1130_mRNA;ortholog_cluster=OG0003816;product=term%3DThioredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13905 LTnewLM_29 Pfam protein_match 449844 449996 . + . Parent=LTnewLM_290017900.1:pep;Name=PF13905;signature_desc=Thioredoxin-like ### LTnewLM_29 AUGUSTUS gene 453961 454788 1 + . ID=LTnewLM_290018000 LTnewLM_29 AUGUSTUS mRNA 453961 454788 1 + . ID=LTnewLM_290018000.1;Parent=LTnewLM_290018000 LTnewLM_29 AUGUSTUS CDS 453961 454788 1 + 0 ID=LTnewLM_290018000.1:CDS:1;Parent=LTnewLM_290018000.1 ### LTnewLM_29 . polypeptide 453961 454788 . + . ID=LTnewLM_290018000.1:pep;Derives_from=LTnewLM_290018000.1;orthologous_to=LmjF.29.1140_mRNA;ortholog_cluster=OG0003817;product=term%3DRedoxin/AhpC/TSA family/Thioredoxin/F plasmid transfer operon protein/Thioredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08534|Pfam:PF00578|Pfam:PF00085|Pfam:PF13728|Pfam:PF13905;Ontology_term=GO:0055114,GO:0016491,GO:0045454,GO:0016209 LTnewLM_29 Pfam protein_match 453997 454242 . + . Parent=LTnewLM_290018000.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_29 Pfam protein_match 453997 454245 . + . Parent=LTnewLM_290018000.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 454060 454197 . + . Parent=LTnewLM_290018000.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_29 Pfam protein_match 454066 454218 . + . Parent=LTnewLM_290018000.1:pep;Name=PF13728;signature_desc=F plasmid transfer operon protein LTnewLM_29 Pfam protein_match 454069 454233 . + . Parent=LTnewLM_290018000.1:pep;Name=PF13905;signature_desc=Thioredoxin-like ### LTnewLM_29 AUGUSTUS gene 459097 459546 1 + . ID=LTnewLM_290018100 LTnewLM_29 AUGUSTUS mRNA 459097 459546 1 + . ID=LTnewLM_290018100.1;Parent=LTnewLM_290018100 LTnewLM_29 AUGUSTUS CDS 459097 459546 1 + 0 ID=LTnewLM_290018100.1:CDS:1;Parent=LTnewLM_290018100.1 ### LTnewLM_29 . polypeptide 459097 459546 . + . ID=LTnewLM_290018100.1:pep;Derives_from=LTnewLM_290018100.1;orthologous_to=LmjF.29.1150_mRNA;ortholog_cluster=OG0003818;product=term%3DAhpC/TSA family/Redoxin/Thioredoxin-like/Thioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00578|Pfam:PF08534|Pfam:PF13905|Pfam:PF00085;Ontology_term=GO:0055114,GO:0016209,GO:0045454,GO:0016491 LTnewLM_29 Pfam protein_match 459148 459321 . + . Parent=LTnewLM_290018100.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 459166 459339 . + . Parent=LTnewLM_290018100.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_29 Pfam protein_match 459181 459441 . + . Parent=LTnewLM_290018100.1:pep;Name=PF13905;signature_desc=Thioredoxin-like LTnewLM_29 Pfam protein_match 459190 459357 . + . Parent=LTnewLM_290018100.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_29 AUGUSTUS gene 460922 461359 1 + . ID=LTnewLM_290018200 LTnewLM_29 AUGUSTUS mRNA 460922 461359 1 + . ID=LTnewLM_290018200.1;Parent=LTnewLM_290018200 LTnewLM_29 AUGUSTUS CDS 460922 461359 1 + 0 ID=LTnewLM_290018200.1:CDS:1;Parent=LTnewLM_290018200.1 ### LTnewLM_29 . polypeptide 460922 461359 . + . ID=LTnewLM_290018200.1:pep;Derives_from=LTnewLM_290018200.1;orthologous_to=LmjF.29.1160_mRNA;ortholog_cluster=OG0003819;product=term%3DThioredoxin/Redoxin/AhpC/TSA family/Thioredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF08534|Pfam:PF00578|Pfam:PF13905;Ontology_term=GO:0055114,GO:0045454,GO:0016209,GO:0016491 LTnewLM_29 Pfam protein_match 460958 461140 . + . Parent=LTnewLM_290018200.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_29 Pfam protein_match 460970 461137 . + . Parent=LTnewLM_290018200.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_29 Pfam protein_match 460976 461140 . + . Parent=LTnewLM_290018200.1:pep;Name=PF00578;signature_desc=AhpC/TSA family;Ontology_term=GO:0016209,GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 461003 461266 . + . Parent=LTnewLM_290018200.1:pep;Name=PF13905;signature_desc=Thioredoxin-like ### LTnewLM_29 AUGUSTUS gene 462535 463647 1 + . ID=LTnewLM_290018300 LTnewLM_29 AUGUSTUS mRNA 462535 463647 1 + . ID=LTnewLM_290018300.1;Parent=LTnewLM_290018300 LTnewLM_29 AUGUSTUS CDS 462535 463647 1 + 0 ID=LTnewLM_290018300.1:CDS:1;Parent=LTnewLM_290018300.1 ### LTnewLM_29 . polypeptide 462535 463647 . + . ID=LTnewLM_290018300.1:pep;Derives_from=LTnewLM_290018300.1;orthologous_to=LmjF.29.1170_mRNA;ortholog_cluster=OG0003820;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 466469 473833 1 + . ID=LTnewLM_290018400 LTnewLM_29 AUGUSTUS mRNA 466469 473833 1 + . ID=LTnewLM_290018400.1;Parent=LTnewLM_290018400 LTnewLM_29 AUGUSTUS CDS 466469 473833 1 + 0 ID=LTnewLM_290018400.1:CDS:1;Parent=LTnewLM_290018400.1 ### LTnewLM_29 . polypeptide 466469 473833 . + . ID=LTnewLM_290018400.1:pep;Derives_from=LTnewLM_290018400.1;orthologous_to=LmjF.29.1180_mRNA;ortholog_cluster=OG0003821;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 475252 477045 1 + . ID=LTnewLM_290018500 LTnewLM_29 AUGUSTUS mRNA 475252 477045 1 + . ID=LTnewLM_290018500.1;Parent=LTnewLM_290018500 LTnewLM_29 AUGUSTUS CDS 475252 477045 1 + 0 ID=LTnewLM_290018500.1:CDS:1;Parent=LTnewLM_290018500.1 ### LTnewLM_29 . polypeptide 475252 477045 . + . ID=LTnewLM_290018500.1:pep;Derives_from=LTnewLM_290018500.1;orthologous_to=LmjF.29.1190_mRNA;ortholog_cluster=OG0003822;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 Liftoff gene 478598 480421 . + . ID=LTnewLM_290018600;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1200_0 LTnewLM_29 Liftoff mRNA 478598 480421 . + . ID=LTnewLM_290018600.1;Parent=LTnewLM_290018600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 478598 480421 . + 0 ID=LTnewLM_290018600.1:CDS:1;Parent=LTnewLM_290018600.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 478598 480421 . + . ID=LTnewLM_290018600.1:pep;Derives_from=LTnewLM_290018600.1;orthologous_to=LmjF.29.1200_mRNA;ortholog_cluster=OG0003823;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 481252 482379 1 + . ID=LTnewLM_290018700 LTnewLM_29 AUGUSTUS mRNA 481252 482379 1 + . ID=LTnewLM_290018700.1;Parent=LTnewLM_290018700 LTnewLM_29 AUGUSTUS CDS 481252 482379 1 + 0 ID=LTnewLM_290018700.1:CDS:1;Parent=LTnewLM_290018700.1 ### LTnewLM_29 . polypeptide 481252 482379 . + . ID=LTnewLM_290018700.1:pep;Derives_from=LTnewLM_290018700.1;orthologous_to=LmjF.29.1210_mRNA;ortholog_cluster=OG0003824;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 483069 484492 1 + . ID=LTnewLM_290018800 LTnewLM_29 AUGUSTUS mRNA 483069 484492 1 + . ID=LTnewLM_290018800.1;Parent=LTnewLM_290018800 LTnewLM_29 AUGUSTUS CDS 483069 483759 1 + 0 ID=LTnewLM_290018800.1:CDS:1;Parent=LTnewLM_290018800.1 LTnewLM_29 AUGUSTUS CDS 483819 484492 1 + 2 ID=LTnewLM_290018800.1:CDS:2;Parent=LTnewLM_290018800.1 ### LTnewLM_29 . polypeptide 483069 484492 . + . ID=LTnewLM_290018800.1:pep;Derives_from=LTnewLM_290018800.1;orthologous_to=LmjF.29.1220_mRNA;ortholog_cluster=OG0003825;product=term%3DSaf4/Yju2 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04502 LTnewLM_29 Pfam protein_match 483105 484040 . + . Parent=LTnewLM_290018800.1:pep;Name=PF04502;signature_desc=Saf4/Yju2 protein ### LTnewLM_29 AUGUSTUS gene 485525 492070 1 + . ID=LTnewLM_290018900 LTnewLM_29 AUGUSTUS mRNA 485525 492070 1 + . ID=LTnewLM_290018900.1;Parent=LTnewLM_290018900 LTnewLM_29 AUGUSTUS CDS 485525 488893 1 + 0 ID=LTnewLM_290018900.1:CDS:1;Parent=LTnewLM_290018900.1 LTnewLM_29 AUGUSTUS CDS 488963 492070 1 + 0 ID=LTnewLM_290018900.1:CDS:2;Parent=LTnewLM_290018900.1 ### LTnewLM_29 . polypeptide 485525 492070 . + . ID=LTnewLM_290018900.1:pep;Derives_from=LTnewLM_290018900.1;orthologous_to=LmjF.29.1230_mRNA;ortholog_cluster=OG0003826;product=term%3DSec23-binding domain of Sec16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12931 LTnewLM_29 Pfam protein_match 489986 490501 . + . Parent=LTnewLM_290018900.1:pep;Name=PF12931;signature_desc=Sec23-binding domain of Sec16 ### LTnewLM_29 AUGUSTUS gene 493425 495746 1 + . ID=LTnewLM_290019000 LTnewLM_29 AUGUSTUS mRNA 493425 495746 1 + . ID=LTnewLM_290019000.1;Parent=LTnewLM_290019000 LTnewLM_29 AUGUSTUS CDS 493425 495746 1 + 0 ID=LTnewLM_290019000.1:CDS:1;Parent=LTnewLM_290019000.1 ### LTnewLM_29 . polypeptide 493425 495746 . + . ID=LTnewLM_290019000.1:pep;Derives_from=LTnewLM_290019000.1;orthologous_to=LmjF.29.1240_mRNA;ortholog_cluster=OG0003827;product=term%3DHsp70 protein/Tetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF13181;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 493536 494738 . + . Parent=LTnewLM_290019000.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_29 Pfam protein_match 495555 495638 . + . Parent=LTnewLM_290019000.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_29 AUGUSTUS gene 497607 503057 1 + . ID=LTnewLM_290019100 LTnewLM_29 AUGUSTUS mRNA 497607 503057 1 + . ID=LTnewLM_290019100.1;Parent=LTnewLM_290019100 LTnewLM_29 AUGUSTUS CDS 497607 503057 1 + 0 ID=LTnewLM_290019100.1:CDS:1;Parent=LTnewLM_290019100.1 ### LTnewLM_29 . polypeptide 497607 503057 . + . ID=LTnewLM_290019100.1:pep;Derives_from=LTnewLM_290019100.1;orthologous_to=LmjF.29.1250_mRNA;ortholog_cluster=OG0003828;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 504477 509639 1 + . ID=LTnewLM_290019200 LTnewLM_29 AUGUSTUS mRNA 504477 509639 1 + . ID=LTnewLM_290019200.1;Parent=LTnewLM_290019200 LTnewLM_29 AUGUSTUS CDS 504477 509639 1 + 0 ID=LTnewLM_290019200.1:CDS:1;Parent=LTnewLM_290019200.1 ### LTnewLM_29 . polypeptide 504477 509639 . + . ID=LTnewLM_290019200.1:pep;Derives_from=LTnewLM_290019200.1;orthologous_to=LmjF.29.1260_mRNA;ortholog_cluster=OG0003829;product=term%3DWnt-binding factor required for Wnt secretion/Lipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06664|Pfam:PF01764;Ontology_term=GO:0006629 LTnewLM_29 Pfam protein_match 505872 506072 . + . Parent=LTnewLM_290019200.1:pep;Name=PF06664;signature_desc=Wnt-binding factor required for Wnt secretion LTnewLM_29 Pfam protein_match 509115 509330 . + . Parent=LTnewLM_290019200.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_29 AUGUSTUS gene 511898 514501 1 + . ID=LTnewLM_290019300 LTnewLM_29 AUGUSTUS mRNA 511898 514501 1 + . ID=LTnewLM_290019300.1;Parent=LTnewLM_290019300 LTnewLM_29 AUGUSTUS CDS 511898 514501 1 + 0 ID=LTnewLM_290019300.1:CDS:1;Parent=LTnewLM_290019300.1 ### LTnewLM_29 . polypeptide 511898 514501 . + . ID=LTnewLM_290019300.1:pep;Derives_from=LTnewLM_290019300.1;orthologous_to=LmjF.29.1270_mRNA;ortholog_cluster=OG0003830;product=term%3DClp amino terminal domain%2C pathogenicity island component/ATPase family associated with various cellular activities (AAA)/AAA lid domain/AAA domain (Cdc48 subfamily)/Sigma-54 interaction domain/AAA domain (dynein-related subfamily)/C-terminal%2C D2-small domain%2C of ClpB protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02861|Pfam:PF00004|Pfam:PF17871|Pfam:PF07724|Pfam:PF00158|Pfam:PF07728|Pfam:PF10431;Ontology_term=GO:0019538,GO:0005524,GO:0016887,GO:0008134,GO:0006355 LTnewLM_29 Pfam protein_match 511958 512068 . + . Parent=LTnewLM_290019300.1:pep;Name=PF02861;signature_desc=Clp amino terminal domain%2C pathogenicity island component;Ontology_term=GO:0019538 LTnewLM_29 Pfam protein_match 512177 512323 . + . Parent=LTnewLM_290019300.1:pep;Name=PF02861;signature_desc=Clp amino terminal domain%2C pathogenicity island component;Ontology_term=GO:0019538 LTnewLM_29 Pfam protein_match 512501 512839 . + . Parent=LTnewLM_290019300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_29 Pfam protein_match 512918 513223 . + . Parent=LTnewLM_290019300.1:pep;Name=PF17871;signature_desc=AAA lid domain LTnewLM_29 Pfam protein_match 513683 514177 . + . Parent=LTnewLM_290019300.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_29 Pfam protein_match 513692 514045 . + . Parent=LTnewLM_290019300.1:pep;Name=PF00158;signature_desc=Sigma-54 interaction domain;Ontology_term=GO:0005524,GO:0008134,GO:0006355 LTnewLM_29 Pfam protein_match 513698 514060 . + . Parent=LTnewLM_290019300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_29 Pfam protein_match 513701 514054 . + . Parent=LTnewLM_290019300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_29 Pfam protein_match 514196 514435 . + . Parent=LTnewLM_290019300.1:pep;Name=PF10431;signature_desc=C-terminal%2C D2-small domain%2C of ClpB protein ### LTnewLM_29 . pseudogene 518082 523894 . + . ID=LTnewLM_290019400:pseudogene;coverage=0.999;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1280_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 518082 523894 . + . ID=LTnewLM_290019400.1;Parent=LTnewLM_290019400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 518082 523894 . + . ID=LTnewLM_290019400.1:pseudogenic_exon:1;Parent=LTnewLM_290019400.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 518082 523894 . + . ID=LTnewLM_290019400.1:pep;Derives_from=LTnewLM_290019400.1;orthologous_to=LmjF.29.1280_mRNA;ortholog_cluster=OG0007580;product=term%3DWnt-binding factor required for Wnt secretion/Lipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06664|Pfam:PF01764;Ontology_term=GO:0006629 LTnewLM_29 Pfam protein_match 519504 520322 . + . Parent=LTnewLM_290019400.1:pep;Name=PF06664;signature_desc=Wnt-binding factor required for Wnt secretion LTnewLM_29 Pfam protein_match 523152 523520 . + . Parent=LTnewLM_290019400.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_29 AUGUSTUS gene 524686 525042 1 + . ID=LTnewLM_290019500 LTnewLM_29 AUGUSTUS mRNA 524686 525042 1 + . ID=LTnewLM_290019500.1;Parent=LTnewLM_290019500 LTnewLM_29 AUGUSTUS CDS 524686 525042 1 + 0 ID=LTnewLM_290019500.1:CDS:1;Parent=LTnewLM_290019500.1 ### LTnewLM_29 . polypeptide 524686 525042 . + . ID=LTnewLM_290019500.1:pep;Derives_from=LTnewLM_290019500.1;orthologous_to=LmjF.29.1290_mRNA;ortholog_cluster=OG0003831;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 526165 527238 1 + . ID=LTnewLM_290019600 LTnewLM_29 AUGUSTUS mRNA 526165 527238 1 + . ID=LTnewLM_290019600.1;Parent=LTnewLM_290019600 LTnewLM_29 AUGUSTUS CDS 526165 527238 1 + 0 ID=LTnewLM_290019600.1:CDS:1;Parent=LTnewLM_290019600.1 ### LTnewLM_29 . polypeptide 526165 527238 . + . ID=LTnewLM_290019600.1:pep;Derives_from=LTnewLM_290019600.1;orthologous_to=LmjF.29.1300_mRNA;ortholog_cluster=OG0003832;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 529318 531201 1 + . ID=LTnewLM_290019700 LTnewLM_29 AUGUSTUS mRNA 529318 531201 1 + . ID=LTnewLM_290019700.1;Parent=LTnewLM_290019700 LTnewLM_29 AUGUSTUS CDS 529318 531201 1 + 0 ID=LTnewLM_290019700.1:CDS:1;Parent=LTnewLM_290019700.1 ### LTnewLM_29 . polypeptide 529318 531201 . + . ID=LTnewLM_290019700.1:pep;Derives_from=LTnewLM_290019700.1;orthologous_to=LmjF.29.1310_mRNA;ortholog_cluster=OG0003833;product=term%3DCholine/Carnitine o-acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00755;Ontology_term=GO:0016746 LTnewLM_29 Pfam protein_match 529372 531117 . + . Parent=LTnewLM_290019700.1:pep;Name=PF00755;signature_desc=Choline/Carnitine o-acyltransferase;Ontology_term=GO:0016746 ### LTnewLM_29 AUGUSTUS gene 534957 536303 1 + . ID=LTnewLM_290019800 LTnewLM_29 AUGUSTUS mRNA 534957 536303 1 + . ID=LTnewLM_290019800.1;Parent=LTnewLM_290019800 LTnewLM_29 AUGUSTUS CDS 534957 536303 1 + 0 ID=LTnewLM_290019800.1:CDS:1;Parent=LTnewLM_290019800.1 ### LTnewLM_29 . polypeptide 534957 536303 . + . ID=LTnewLM_290019800.1:pep;Derives_from=LTnewLM_290019800.1;orthologous_to=LmjF.29.1320_mRNA;ortholog_cluster=OG0003834;product=term%3DRNA polymerase Rpc34 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05158;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_29 Pfam protein_match 534984 536297 . + . Parent=LTnewLM_290019800.1:pep;Name=PF05158;signature_desc=RNA polymerase Rpc34 subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_29 AUGUSTUS gene 537842 539605 1 + . ID=LTnewLM_290019900 LTnewLM_29 AUGUSTUS mRNA 537842 539605 1 + . ID=LTnewLM_290019900.1;Parent=LTnewLM_290019900 LTnewLM_29 AUGUSTUS CDS 537842 539605 1 + 0 ID=LTnewLM_290019900.1:CDS:1;Parent=LTnewLM_290019900.1 ### LTnewLM_29 . polypeptide 537842 539605 . + . ID=LTnewLM_290019900.1:pep;Derives_from=LTnewLM_290019900.1;orthologous_to=LmjF.29.1330_mRNA;ortholog_cluster=OG0003835;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 538625 539581 . + . Parent=LTnewLM_290019900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 538631 539071 . + . Parent=LTnewLM_290019900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_29 Pfam protein_match 539222 539368 . + . Parent=LTnewLM_290019900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 544666 546585 1 + . ID=LTnewLM_290020000 LTnewLM_29 AUGUSTUS mRNA 544666 546585 1 + . ID=LTnewLM_290020000.1;Parent=LTnewLM_290020000 LTnewLM_29 AUGUSTUS CDS 544666 546585 1 + 0 ID=LTnewLM_290020000.1:CDS:1;Parent=LTnewLM_290020000.1 ### LTnewLM_29 . polypeptide 544666 546585 . + . ID=LTnewLM_290020000.1:pep;Derives_from=LTnewLM_290020000.1;orthologous_to=LmjF.29.1340_mRNA;ortholog_cluster=OG0003836;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 544867 545073 . + . Parent=LTnewLM_290020000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 545146 545373 . + . Parent=LTnewLM_290020000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 AUGUSTUS gene 560594 561158 0.41 + . ID=LTnewLM_290020100 LTnewLM_29 AUGUSTUS mRNA 560594 561158 0.41 + . ID=LTnewLM_290020100.1;Parent=LTnewLM_290020100 LTnewLM_29 AUGUSTUS CDS 560594 560884 0.77 + 0 ID=LTnewLM_290020100.1:CDS:1;Parent=LTnewLM_290020100.1 LTnewLM_29 AUGUSTUS CDS 560961 561158 0.41 + 0 ID=LTnewLM_290020100.1:CDS:2;Parent=LTnewLM_290020100.1 ### LTnewLM_29 . polypeptide 560594 561158 . + . ID=LTnewLM_290020100.1:pep;Derives_from=LTnewLM_290020100.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 562075 562521 1 + . ID=LTnewLM_290020200 LTnewLM_29 AUGUSTUS mRNA 562075 562521 1 + . ID=LTnewLM_290020200.1;Parent=LTnewLM_290020200 LTnewLM_29 AUGUSTUS CDS 562075 562521 1 + 0 ID=LTnewLM_290020200.1:CDS:1;Parent=LTnewLM_290020200.1 ### LTnewLM_29 . polypeptide 562075 562521 . + . ID=LTnewLM_290020200.1:pep;Derives_from=LTnewLM_290020200.1;orthologous_to=LTnewLM_080012200.1,LTnewLM_080012300.1,LTnewLM_340034000.1,LmjF.08.0790_mRNA,LmjF.34.2800_mRNA;ortholog_cluster=OG0000062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 563829 568130 0.47 + . ID=LTnewLM_290020300 LTnewLM_29 AUGUSTUS mRNA 563829 568130 0.47 + . ID=LTnewLM_290020300.1;Parent=LTnewLM_290020300 LTnewLM_29 AUGUSTUS CDS 563829 564408 0.78 + 0 ID=LTnewLM_290020300.1:CDS:1;Parent=LTnewLM_290020300.1 LTnewLM_29 AUGUSTUS CDS 567574 568130 0.64 + 2 ID=LTnewLM_290020300.1:CDS:2;Parent=LTnewLM_290020300.1 ### LTnewLM_29 . polypeptide 563829 568130 . + . ID=LTnewLM_290020300.1:pep;Derives_from=LTnewLM_290020300.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_29 Pfam protein_match 563871 564338 . + . Parent=LTnewLM_290020300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_29 AUGUSTUS gene 575306 578067 0.95 + . ID=LTnewLM_290020400 LTnewLM_29 AUGUSTUS mRNA 575306 578067 0.95 + . ID=LTnewLM_290020400.1;Parent=LTnewLM_290020400 LTnewLM_29 AUGUSTUS CDS 575306 575389 1 + 0 ID=LTnewLM_290020400.1:CDS:1;Parent=LTnewLM_290020400.1 LTnewLM_29 AUGUSTUS CDS 575482 578067 0.95 + 0 ID=LTnewLM_290020400.1:CDS:2;Parent=LTnewLM_290020400.1 ### LTnewLM_29 . polypeptide 575306 578067 . + . ID=LTnewLM_290020400.1:pep;Derives_from=LTnewLM_290020400.1;orthologous_to=LmjF.29.1350_mRNA;ortholog_cluster=OG0003837;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 575876 576052 . + . Parent=LTnewLM_290020400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 576167 576367 . + . Parent=LTnewLM_290020400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 Aragorn_1.2.36 gene 575598 575682 . - . ID=LTnewLM_290020500 LTnewLM_29 Aragorn_1.2.36 tRNA 575598 575682 . - . ID=LTnewLM_290020500:tRNA;Parent=LTnewLM_290020500;aa=Ala;anticodon=ggc;gc_content=68.2 ### LTnewLM_29 AUGUSTUS gene 591056 593047 1 + . ID=LTnewLM_290020600 LTnewLM_29 AUGUSTUS mRNA 591056 593047 1 + . ID=LTnewLM_290020600.1;Parent=LTnewLM_290020600 LTnewLM_29 AUGUSTUS CDS 591056 593047 1 + 0 ID=LTnewLM_290020600.1:CDS:1;Parent=LTnewLM_290020600.1 ### LTnewLM_29 . polypeptide 591056 593047 . + . ID=LTnewLM_290020600.1:pep;Derives_from=LTnewLM_290020600.1;orthologous_to=LmjF.29.1360_mRNA;ortholog_cluster=OG0003838;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 591488 591694 . + . Parent=LTnewLM_290020600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 591764 591964 . + . Parent=LTnewLM_290020600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 . pseudogene 612369 617004 . + . ID=LTnewLM_290020700:pseudogene;coverage=0.993;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1370_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 612369 617004 . + . ID=LTnewLM_290020700.1;Parent=LTnewLM_290020700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 612369 617004 . + . ID=LTnewLM_290020700.1:pseudogenic_exon:1;Parent=LTnewLM_290020700.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 612369 617004 . + . ID=LTnewLM_290020700.1:pep;Derives_from=LTnewLM_290020700.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 619890 621818 1 + . ID=LTnewLM_290020800 LTnewLM_29 AUGUSTUS mRNA 619890 621818 1 + . ID=LTnewLM_290020800.1;Parent=LTnewLM_290020800 LTnewLM_29 AUGUSTUS CDS 619890 621818 1 + 0 ID=LTnewLM_290020800.1:CDS:1;Parent=LTnewLM_290020800.1 ### LTnewLM_29 . polypeptide 619890 621818 . + . ID=LTnewLM_290020800.1:pep;Derives_from=LTnewLM_290020800.1;orthologous_to=LmjF.29.1380_mRNA;ortholog_cluster=OG0003839;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 624422 626767 1 + . ID=LTnewLM_290020900 LTnewLM_29 AUGUSTUS mRNA 624422 626767 1 + . ID=LTnewLM_290020900.1;Parent=LTnewLM_290020900 LTnewLM_29 AUGUSTUS CDS 624422 626767 1 + 0 ID=LTnewLM_290020900.1:CDS:1;Parent=LTnewLM_290020900.1 ### LTnewLM_29 . polypeptide 624422 626767 . + . ID=LTnewLM_290020900.1:pep;Derives_from=LTnewLM_290020900.1;orthologous_to=LmjF.29.1390_mRNA;ortholog_cluster=OG0003840;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 624722 624889 . + . Parent=LTnewLM_290020900.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 AUGUSTUS gene 637135 638085 1 + . ID=LTnewLM_290021000 LTnewLM_29 AUGUSTUS mRNA 637135 638085 1 + . ID=LTnewLM_290021000.1;Parent=LTnewLM_290021000 LTnewLM_29 AUGUSTUS CDS 637135 638085 1 + 0 ID=LTnewLM_290021000.1:CDS:1;Parent=LTnewLM_290021000.1 ### LTnewLM_29 . polypeptide 637135 638085 . + . ID=LTnewLM_290021000.1:pep;Derives_from=LTnewLM_290021000.1;orthologous_to=LmjF.29.1400_mRNA;ortholog_cluster=OG0003841;product=term%3DLYAR-type C2HC zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08790 LTnewLM_29 Pfam protein_match 637222 637302 . + . Parent=LTnewLM_290021000.1:pep;Name=PF08790;signature_desc=LYAR-type C2HC zinc finger ### LTnewLM_29 AUGUSTUS gene 641224 645009 1 + . ID=LTnewLM_290021100 LTnewLM_29 AUGUSTUS mRNA 641224 645009 1 + . ID=LTnewLM_290021100.1;Parent=LTnewLM_290021100 LTnewLM_29 AUGUSTUS CDS 641224 645009 1 + 0 ID=LTnewLM_290021100.1:CDS:1;Parent=LTnewLM_290021100.1 ### LTnewLM_29 . polypeptide 641224 645009 . + . ID=LTnewLM_290021100.1:pep;Derives_from=LTnewLM_290021100.1;orthologous_to=LmjF.29.1410_mRNA;ortholog_cluster=OG0003842;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 649357 649854 1 - . ID=LTnewLM_290021200 LTnewLM_29 AUGUSTUS mRNA 649357 649854 1 - . ID=LTnewLM_290021200.1;Parent=LTnewLM_290021200 LTnewLM_29 AUGUSTUS CDS 649357 649854 1 - 0 ID=LTnewLM_290021200.1:CDS:1;Parent=LTnewLM_290021200.1 ### LTnewLM_29 . polypeptide 649357 649854 . - . ID=LTnewLM_290021200.1:pep;Derives_from=LTnewLM_290021200.1;orthologous_to=LmjF.29.1440_mRNA;ortholog_cluster=OG0003843;product=term%3DClathrin adaptor complex small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01217 LTnewLM_29 Pfam protein_match 649438 649854 . - . Parent=LTnewLM_290021200.1:pep;Name=PF01217;signature_desc=Clathrin adaptor complex small chain ### LTnewLM_29 AUGUSTUS gene 650592 652211 1 - . ID=LTnewLM_290021300 LTnewLM_29 AUGUSTUS mRNA 650592 652211 1 - . ID=LTnewLM_290021300.1;Parent=LTnewLM_290021300 LTnewLM_29 AUGUSTUS CDS 650592 652211 1 - 0 ID=LTnewLM_290021300.1:CDS:1;Parent=LTnewLM_290021300.1 ### LTnewLM_29 . polypeptide 650592 652211 . - . ID=LTnewLM_290021300.1:pep;Derives_from=LTnewLM_290021300.1;orthologous_to=LmjF.29.1430_mRNA;ortholog_cluster=OG0003844;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 655422 655661 1 - . ID=LTnewLM_290021400 LTnewLM_29 AUGUSTUS mRNA 655422 655661 1 - . ID=LTnewLM_290021400.1;Parent=LTnewLM_290021400 LTnewLM_29 AUGUSTUS CDS 655422 655661 1 - 0 ID=LTnewLM_290021400.1:CDS:1;Parent=LTnewLM_290021400.1 ### LTnewLM_29 . polypeptide 655422 655661 . - . ID=LTnewLM_290021400.1:pep;Derives_from=LTnewLM_290021400.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 656355 656786 1 - . ID=LTnewLM_290021500 LTnewLM_29 AUGUSTUS mRNA 656355 656786 1 - . ID=LTnewLM_290021500.1;Parent=LTnewLM_290021500 LTnewLM_29 AUGUSTUS CDS 656355 656786 1 - 0 ID=LTnewLM_290021500.1:CDS:1;Parent=LTnewLM_290021500.1 ### LTnewLM_29 . polypeptide 656355 656786 . - . ID=LTnewLM_290021500.1:pep;Derives_from=LTnewLM_290021500.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 659029 667005 1 - . ID=LTnewLM_290021600 LTnewLM_29 AUGUSTUS mRNA 659029 667005 1 - . ID=LTnewLM_290021600.1;Parent=LTnewLM_290021600 LTnewLM_29 AUGUSTUS CDS 659029 667005 1 - 0 ID=LTnewLM_290021600.1:CDS:1;Parent=LTnewLM_290021600.1 ### LTnewLM_29 . polypeptide 659029 667005 . - . ID=LTnewLM_290021600.1:pep;Derives_from=LTnewLM_290021600.1;orthologous_to=LmjF.29.1450_mRNA;ortholog_cluster=OG0003845;product=term%3DPI4-kinase N-terminal region/Phosphoinositide 3-kinase family%2C accessory domain (PIK domain)/Phosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19274|Pfam:PF00613|Pfam:PF00454;Ontology_term=GO:0016773 LTnewLM_29 Pfam protein_match 659197 659853 . - . Parent=LTnewLM_290021600.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_29 Pfam protein_match 660292 660546 . - . Parent=LTnewLM_290021600.1:pep;Name=PF00613;signature_desc=Phosphoinositide 3-kinase family%2C accessory domain (PIK domain) LTnewLM_29 Pfam protein_match 660811 661827 . - . Parent=LTnewLM_290021600.1:pep;Name=PF19274;signature_desc=PI4-kinase N-terminal region ### LTnewLM_29 AUGUSTUS gene 668633 672766 1 - . ID=LTnewLM_290021700 LTnewLM_29 AUGUSTUS mRNA 668633 672766 1 - . ID=LTnewLM_290021700.1;Parent=LTnewLM_290021700 LTnewLM_29 AUGUSTUS CDS 668633 672766 1 - 0 ID=LTnewLM_290021700.1:CDS:1;Parent=LTnewLM_290021700.1 ### LTnewLM_29 . polypeptide 668633 672766 . - . ID=LTnewLM_290021700.1:pep;Derives_from=LTnewLM_290021700.1;orthologous_to=LmjF.29.1460_mRNA;ortholog_cluster=OG0003846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 675143 677281 1 - . ID=LTnewLM_290021800 LTnewLM_29 AUGUSTUS mRNA 675143 677281 1 - . ID=LTnewLM_290021800.1;Parent=LTnewLM_290021800 LTnewLM_29 AUGUSTUS CDS 675143 677281 1 - 0 ID=LTnewLM_290021800.1:CDS:1;Parent=LTnewLM_290021800.1 ### LTnewLM_29 . polypeptide 675143 677281 . - . ID=LTnewLM_290021800.1:pep;Derives_from=LTnewLM_290021800.1;orthologous_to=LmjF.29.1470_mRNA;ortholog_cluster=OG0003847;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 Liftoff gene 678418 679290 . - . ID=LTnewLM_290021900;coverage=0.998;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1480_0 LTnewLM_29 Liftoff mRNA 678418 679290 . - . ID=LTnewLM_290021900.1;Parent=LTnewLM_290021900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 678418 679290 . - 0 ID=LTnewLM_290021900.1:CDS:1;Parent=LTnewLM_290021900.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 678418 679290 . - . ID=LTnewLM_290021900.1:pep;Derives_from=LTnewLM_290021900.1;orthologous_to=LmjF.29.1480_mRNA;ortholog_cluster=OG0003848;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 681549 685256 1 - . ID=LTnewLM_290022000 LTnewLM_29 AUGUSTUS mRNA 681549 685256 1 - . ID=LTnewLM_290022000.1;Parent=LTnewLM_290022000 LTnewLM_29 AUGUSTUS CDS 681549 685256 1 - 0 ID=LTnewLM_290022000.1:CDS:1;Parent=LTnewLM_290022000.1 ### LTnewLM_29 . polypeptide 681549 685256 . - . ID=LTnewLM_290022000.1:pep;Derives_from=LTnewLM_290022000.1;orthologous_to=LTnewLM_290022200.1,LmjF.29.1490_mRNA;ortholog_cluster=OG0000424;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 689192 691211 0.44 - . ID=LTnewLM_290022100 LTnewLM_29 AUGUSTUS mRNA 689192 691211 0.44 - . ID=LTnewLM_290022100.1;Parent=LTnewLM_290022100 LTnewLM_29 AUGUSTUS CDS 689192 690760 0.45 - 0 ID=LTnewLM_290022100.1:CDS:1;Parent=LTnewLM_290022100.1 LTnewLM_29 AUGUSTUS CDS 690807 691211 0.97 - 0 ID=LTnewLM_290022100.1:CDS:2;Parent=LTnewLM_290022100.1 ### LTnewLM_29 . polypeptide 689192 691211 . - . ID=LTnewLM_290022100.1:pep;Derives_from=LTnewLM_290022100.1;orthologous_to=LTnewLM_290022300.1,LmjF.29.1500_mRNA,LmjF.29.1510_mRNA;ortholog_cluster=OG0000205;product=term%3DNodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813 LTnewLM_29 Pfam protein_match 690867 691175 . - . Parent=LTnewLM_290022100.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_29 . pseudogene 699410 703119 . - . ID=LTnewLM_290022200:pseudogene;coverage=1.0;sequence_ID=0.964;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1490_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 699410 703119 . - . ID=LTnewLM_290022200.1;Parent=LTnewLM_290022200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 699410 703119 . - . ID=LTnewLM_290022200.1:pseudogenic_exon:1;Parent=LTnewLM_290022200.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 699410 703119 . - . ID=LTnewLM_290022200.1:pep;Derives_from=LTnewLM_290022200.1;orthologous_to=LTnewLM_290022000.1,LmjF.29.1490_mRNA;ortholog_cluster=OG0000424;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 707025 709046 1 - . ID=LTnewLM_290022300 LTnewLM_29 AUGUSTUS mRNA 707025 709046 1 - . ID=LTnewLM_290022300.1;Parent=LTnewLM_290022300 LTnewLM_29 AUGUSTUS CDS 707025 709046 1 - 0 ID=LTnewLM_290022300.1:CDS:1;Parent=LTnewLM_290022300.1 ### LTnewLM_29 . polypeptide 707025 709046 . - . ID=LTnewLM_290022300.1:pep;Derives_from=LTnewLM_290022300.1;orthologous_to=LTnewLM_290022100.1,LmjF.29.1500_mRNA,LmjF.29.1510_mRNA;ortholog_cluster=OG0000205;product=term%3DNodulin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813 LTnewLM_29 Pfam protein_match 708552 709010 . - . Parent=LTnewLM_290022300.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_29 AUGUSTUS gene 715097 717043 1 - . ID=LTnewLM_290022400 LTnewLM_29 AUGUSTUS mRNA 715097 717043 1 - . ID=LTnewLM_290022400.1;Parent=LTnewLM_290022400 LTnewLM_29 AUGUSTUS CDS 715097 717043 1 - 0 ID=LTnewLM_290022400.1:CDS:1;Parent=LTnewLM_290022400.1 ### LTnewLM_29 . polypeptide 715097 717043 . - . ID=LTnewLM_290022400.1:pep;Derives_from=LTnewLM_290022400.1;orthologous_to=LTnewLM_290022500.1,LmjF.29.1420_mRNA,LmjF.29.1520_mRNA;ortholog_cluster=OG0000206;product=term%3DNodulin-like/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813|Pfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_29 Pfam protein_match 716192 716983 . - . Parent=LTnewLM_290022400.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_29 Pfam protein_match 716420 717004 . - . Parent=LTnewLM_290022400.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_29 . pseudogene 722474 724373 . - . ID=LTnewLM_290022500:pseudogene;coverage=0.973;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1520_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 722474 724373 . - . ID=LTnewLM_290022500.1;Parent=LTnewLM_290022500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 722474 724373 . - . ID=LTnewLM_290022500.1:pseudogenic_exon:1;Parent=LTnewLM_290022500.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 722474 724373 . - . ID=LTnewLM_290022500.1:pep;Derives_from=LTnewLM_290022500.1;orthologous_to=LTnewLM_290022400.1,LmjF.29.1420_mRNA,LmjF.29.1520_mRNA;ortholog_cluster=OG0000206;product=term%3DNodulin-like/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813|Pfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_29 Pfam protein_match 723519 724256 . - . Parent=LTnewLM_290022500.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_29 Pfam protein_match 723750 724277 . - . Parent=LTnewLM_290022500.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_29 AUGUSTUS gene 726033 728168 1 - . ID=LTnewLM_290022600 LTnewLM_29 AUGUSTUS mRNA 726033 728168 1 - . ID=LTnewLM_290022600.1;Parent=LTnewLM_290022600 LTnewLM_29 AUGUSTUS CDS 726033 728168 1 - 0 ID=LTnewLM_290022600.1:CDS:1;Parent=LTnewLM_290022600.1 ### LTnewLM_29 . polypeptide 726033 728168 . - . ID=LTnewLM_290022600.1:pep;Derives_from=LTnewLM_290022600.1;orthologous_to=LmjF.29.1530_mRNA;ortholog_cluster=OG0003849;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 729955 730533 1 - . ID=LTnewLM_290022700 LTnewLM_29 AUGUSTUS mRNA 729955 730533 1 - . ID=LTnewLM_290022700.1;Parent=LTnewLM_290022700 LTnewLM_29 AUGUSTUS CDS 729955 730533 1 - 0 ID=LTnewLM_290022700.1:CDS:1;Parent=LTnewLM_290022700.1 ### LTnewLM_29 . polypeptide 729955 730533 . - . ID=LTnewLM_290022700.1:pep;Derives_from=LTnewLM_290022700.1;orthologous_to=LmjF.29.1540_mRNA;ortholog_cluster=OG0003850;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 731445 733805 1 - . ID=LTnewLM_290022800 LTnewLM_29 AUGUSTUS mRNA 731445 733805 1 - . ID=LTnewLM_290022800.1;Parent=LTnewLM_290022800 LTnewLM_29 AUGUSTUS CDS 731445 733805 1 - 0 ID=LTnewLM_290022800.1:CDS:1;Parent=LTnewLM_290022800.1 ### LTnewLM_29 . polypeptide 731445 733805 . - . ID=LTnewLM_290022800.1:pep;Derives_from=LTnewLM_290022800.1;orthologous_to=LmjF.29.1550_mRNA;ortholog_cluster=OG0003851;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 735124 737472 0.98 - . ID=LTnewLM_290022900 LTnewLM_29 AUGUSTUS mRNA 735124 737472 0.98 - . ID=LTnewLM_290022900.1;Parent=LTnewLM_290022900 LTnewLM_29 AUGUSTUS CDS 735124 737472 0.98 - 0 ID=LTnewLM_290022900.1:CDS:1;Parent=LTnewLM_290022900.1 ### LTnewLM_29 . polypeptide 735124 737472 . - . ID=LTnewLM_290022900.1:pep;Derives_from=LTnewLM_290022900.1;orthologous_to=LmjF.29.1560_mRNA;ortholog_cluster=OG0003852;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_29 Pfam protein_match 735406 736032 . - . Parent=LTnewLM_290022900.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_29 AUGUSTUS gene 739167 740372 1 - . ID=LTnewLM_290023000 LTnewLM_29 AUGUSTUS mRNA 739167 740372 1 - . ID=LTnewLM_290023000.1;Parent=LTnewLM_290023000 LTnewLM_29 AUGUSTUS CDS 739167 740372 1 - 0 ID=LTnewLM_290023000.1:CDS:1;Parent=LTnewLM_290023000.1 ### LTnewLM_29 . polypeptide 739167 740372 . - . ID=LTnewLM_290023000.1:pep;Derives_from=LTnewLM_290023000.1;orthologous_to=LTnewLM_310030100.1,LTnewLM_310039800.1,LmjF.29.1570_mRNA;ortholog_cluster=OG0000207;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_29 Pfam protein_match 739215 740156 . - . Parent=LTnewLM_290023000.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_29 Pfam protein_match 739512 739847 . - . Parent=LTnewLM_290023000.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_29 AUGUSTUS gene 741243 743132 1 - . ID=LTnewLM_290023100 LTnewLM_29 AUGUSTUS mRNA 741243 743132 1 - . ID=LTnewLM_290023100.1;Parent=LTnewLM_290023100 LTnewLM_29 AUGUSTUS CDS 741243 743132 1 - 0 ID=LTnewLM_290023100.1:CDS:1;Parent=LTnewLM_290023100.1 ### LTnewLM_29 . polypeptide 741243 743132 . - . ID=LTnewLM_290023100.1:pep;Derives_from=LTnewLM_290023100.1;orthologous_to=LmjF.29.1575_mRNA;ortholog_cluster=OG0003853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 744553 745755 1 - . ID=LTnewLM_290023200 LTnewLM_29 AUGUSTUS mRNA 744553 745755 1 - . ID=LTnewLM_290023200.1;Parent=LTnewLM_290023200 LTnewLM_29 AUGUSTUS CDS 744553 745755 1 - 0 ID=LTnewLM_290023200.1:CDS:1;Parent=LTnewLM_290023200.1 ### LTnewLM_29 . polypeptide 744553 745755 . - . ID=LTnewLM_290023200.1:pep;Derives_from=LTnewLM_290023200.1;orthologous_to=LmjF.29.1580_mRNA;ortholog_cluster=OG0003854;product=term%3DXPC-binding domain/UBA/TS-N domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09280|Pfam:PF00627;Ontology_term=GO:0006289,GO:0043161,GO:0005515,GO:0003684 LTnewLM_29 Pfam protein_match 744580 744687 . - . Parent=LTnewLM_290023200.1:pep;Name=PF00627;signature_desc=UBA/TS-N domain;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 745039 745173 . - . Parent=LTnewLM_290023200.1:pep;Name=PF09280;signature_desc=XPC-binding domain;Ontology_term=GO:0003684,GO:0006289,GO:0043161 ### LTnewLM_29 AUGUSTUS gene 746370 746738 1 - . ID=LTnewLM_290023300 LTnewLM_29 AUGUSTUS mRNA 746370 746738 1 - . ID=LTnewLM_290023300.1;Parent=LTnewLM_290023300 LTnewLM_29 AUGUSTUS CDS 746370 746738 1 - 0 ID=LTnewLM_290023300.1:CDS:1;Parent=LTnewLM_290023300.1 ### LTnewLM_29 . polypeptide 746370 746738 . - . ID=LTnewLM_290023300.1:pep;Derives_from=LTnewLM_290023300.1;orthologous_to=LmjF.29.1585_mRNA;ortholog_cluster=OG0003855;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 747773 750813 0.47 - . ID=LTnewLM_290023400 LTnewLM_29 AUGUSTUS mRNA 747773 750813 0.47 - . ID=LTnewLM_290023400.1;Parent=LTnewLM_290023400 LTnewLM_29 AUGUSTUS CDS 747773 749595 0.47 - 2 ID=LTnewLM_290023400.1:CDS:1;Parent=LTnewLM_290023400.1 LTnewLM_29 AUGUSTUS CDS 749640 750813 0.68 - 0 ID=LTnewLM_290023400.1:CDS:2;Parent=LTnewLM_290023400.1 ### LTnewLM_29 . polypeptide 747773 750813 . - . ID=LTnewLM_290023400.1:pep;Derives_from=LTnewLM_290023400.1;orthologous_to=LmjF.29.1590_mRNA;ortholog_cluster=OG0003856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 754578 756620 1 - . ID=LTnewLM_290023500 LTnewLM_29 AUGUSTUS mRNA 754578 756620 1 - . ID=LTnewLM_290023500.1;Parent=LTnewLM_290023500 LTnewLM_29 AUGUSTUS CDS 754578 756620 1 - 0 ID=LTnewLM_290023500.1:CDS:1;Parent=LTnewLM_290023500.1 ### LTnewLM_29 . polypeptide 754578 756620 . - . ID=LTnewLM_290023500.1:pep;Derives_from=LTnewLM_290023500.1;orthologous_to=LmjF.29.1600_mRNA;ortholog_cluster=OG0003857;product=term%3DEndomembrane protein 70%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02990;Ontology_term=GO:0016021 LTnewLM_29 Pfam protein_match 754713 756395 . - . Parent=LTnewLM_290023500.1:pep;Name=PF02990;signature_desc=Endomembrane protein 70;Ontology_term=GO:0016021 ### LTnewLM_29 AUGUSTUS gene 758044 759174 1 - . ID=LTnewLM_290023600 LTnewLM_29 AUGUSTUS mRNA 758044 759174 1 - . ID=LTnewLM_290023600.1;Parent=LTnewLM_290023600 LTnewLM_29 AUGUSTUS CDS 758044 759174 1 - 0 ID=LTnewLM_290023600.1:CDS:1;Parent=LTnewLM_290023600.1 ### LTnewLM_29 . polypeptide 758044 759174 . - . ID=LTnewLM_290023600.1:pep;Derives_from=LTnewLM_290023600.1;orthologous_to=LmjF.29.1610_mRNA;ortholog_cluster=OG0003858;product=term%3DIntegral membrane protein S linking to the trans Golgi network%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09801 LTnewLM_29 Pfam protein_match 758344 758613 . - . Parent=LTnewLM_290023600.1:pep;Name=PF09801;signature_desc=Integral membrane protein S linking to the trans Golgi network ### LTnewLM_29 Liftoff gene 762180 768851 . - . ID=LTnewLM_290023700;coverage=0.999;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.1620_0 LTnewLM_29 Liftoff mRNA 762180 768851 . - . ID=LTnewLM_290023700.1;Parent=LTnewLM_290023700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 762180 768851 . - 0 ID=LTnewLM_290023700.1:CDS:1;Parent=LTnewLM_290023700.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 762180 768851 . - . ID=LTnewLM_290023700.1:pep;Derives_from=LTnewLM_290023700.1;orthologous_to=LmjF.29.1620_mRNA;ortholog_cluster=OG0003859;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 770109 773762 1 - . ID=LTnewLM_290023800 LTnewLM_29 AUGUSTUS mRNA 770109 773762 1 - . ID=LTnewLM_290023800.1;Parent=LTnewLM_290023800 LTnewLM_29 AUGUSTUS CDS 770109 773762 1 - 0 ID=LTnewLM_290023800.1:CDS:1;Parent=LTnewLM_290023800.1 ### LTnewLM_29 . polypeptide 770109 773762 . - . ID=LTnewLM_290023800.1:pep;Derives_from=LTnewLM_290023800.1;orthologous_to=LmjF.29.1630_mRNA;ortholog_cluster=OG0003860;product=term%3DRING-variant domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12906;Ontology_term=GO:0008270 LTnewLM_29 Pfam protein_match 773394 773537 . - . Parent=LTnewLM_290023800.1:pep;Name=PF12906;signature_desc=RING-variant domain;Ontology_term=GO:0008270 ### LTnewLM_29 AUGUSTUS gene 777424 778815 1 - . ID=LTnewLM_290023900 LTnewLM_29 AUGUSTUS mRNA 777424 778815 1 - . ID=LTnewLM_290023900.1;Parent=LTnewLM_290023900 LTnewLM_29 AUGUSTUS CDS 777424 778815 1 - 0 ID=LTnewLM_290023900.1:CDS:1;Parent=LTnewLM_290023900.1 ### LTnewLM_29 . polypeptide 777424 778815 . - . ID=LTnewLM_290023900.1:pep;Derives_from=LTnewLM_290023900.1;orthologous_to=LmjF.29.1640_mRNA;ortholog_cluster=OG0003861;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_29 Pfam protein_match 778015 778443 . - . Parent=LTnewLM_290023900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_29 AUGUSTUS gene 780902 781294 1 - . ID=LTnewLM_290024000 LTnewLM_29 AUGUSTUS mRNA 780902 781294 1 - . ID=LTnewLM_290024000.1;Parent=LTnewLM_290024000 LTnewLM_29 AUGUSTUS CDS 780902 781294 1 - 0 ID=LTnewLM_290024000.1:CDS:1;Parent=LTnewLM_290024000.1 ### LTnewLM_29 . polypeptide 780902 781294 . - . ID=LTnewLM_290024000.1:pep;Derives_from=LTnewLM_290024000.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 783186 784541 1 - . ID=LTnewLM_290024100 LTnewLM_29 AUGUSTUS mRNA 783186 784541 1 - . ID=LTnewLM_290024100.1;Parent=LTnewLM_290024100 LTnewLM_29 AUGUSTUS CDS 783186 784541 1 - 0 ID=LTnewLM_290024100.1:CDS:1;Parent=LTnewLM_290024100.1 ### LTnewLM_29 . polypeptide 783186 784541 . - . ID=LTnewLM_290024100.1:pep;Derives_from=LTnewLM_290024100.1;orthologous_to=LmjF.29.1650_mRNA;ortholog_cluster=OG0003862;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_29 Pfam protein_match 783300 783473 . - . Parent=LTnewLM_290024100.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_29 AUGUSTUS gene 786962 787201 1 - . ID=LTnewLM_290024200 LTnewLM_29 AUGUSTUS mRNA 786962 787201 1 - . ID=LTnewLM_290024200.1;Parent=LTnewLM_290024200 LTnewLM_29 AUGUSTUS CDS 786962 787201 1 - 0 ID=LTnewLM_290024200.1:CDS:1;Parent=LTnewLM_290024200.1 ### LTnewLM_29 . polypeptide 786962 787201 . - . ID=LTnewLM_290024200.1:pep;Derives_from=LTnewLM_290024200.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 787837 788646 1 - . ID=LTnewLM_290024300 LTnewLM_29 AUGUSTUS mRNA 787837 788646 1 - . ID=LTnewLM_290024300.1;Parent=LTnewLM_290024300 LTnewLM_29 AUGUSTUS CDS 787837 788646 1 - 0 ID=LTnewLM_290024300.1:CDS:1;Parent=LTnewLM_290024300.1 ### LTnewLM_29 . polypeptide 787837 788646 . - . ID=LTnewLM_290024300.1:pep;Derives_from=LTnewLM_290024300.1;orthologous_to=LmjF.29.1660_mRNA;ortholog_cluster=OG0003863;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 791918 792310 1 - . ID=LTnewLM_290024400 LTnewLM_29 AUGUSTUS mRNA 791918 792310 1 - . ID=LTnewLM_290024400.1;Parent=LTnewLM_290024400 LTnewLM_29 AUGUSTUS CDS 791918 792310 1 - 0 ID=LTnewLM_290024400.1:CDS:1;Parent=LTnewLM_290024400.1 ### LTnewLM_29 . polypeptide 791918 792310 . - . ID=LTnewLM_290024400.1:pep;Derives_from=LTnewLM_290024400.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 793626 794825 1 - . ID=LTnewLM_290024500 LTnewLM_29 AUGUSTUS mRNA 793626 794825 1 - . ID=LTnewLM_290024500.1;Parent=LTnewLM_290024500 LTnewLM_29 AUGUSTUS CDS 793626 794825 1 - 0 ID=LTnewLM_290024500.1:CDS:1;Parent=LTnewLM_290024500.1 ### LTnewLM_29 . polypeptide 793626 794825 . - . ID=LTnewLM_290024500.1:pep;Derives_from=LTnewLM_290024500.1;orthologous_to=LmjF.29.1690_mRNA;ortholog_cluster=OG0003864;product=term%3DThioesterase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03061 LTnewLM_29 Pfam protein_match 793854 794066 . - . Parent=LTnewLM_290024500.1:pep;Name=PF03061;signature_desc=Thioesterase superfamily ### LTnewLM_29 AUGUSTUS gene 796016 799702 1 - . ID=LTnewLM_290024600 LTnewLM_29 AUGUSTUS mRNA 796016 799702 1 - . ID=LTnewLM_290024600.1;Parent=LTnewLM_290024600 LTnewLM_29 AUGUSTUS CDS 796016 799702 1 - 0 ID=LTnewLM_290024600.1:CDS:1;Parent=LTnewLM_290024600.1 ### LTnewLM_29 . polypeptide 796016 799702 . - . ID=LTnewLM_290024600.1:pep;Derives_from=LTnewLM_290024600.1;orthologous_to=LmjF.29.1700_mRNA;ortholog_cluster=OG0003865;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_29 Pfam protein_match 797327 797377 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 797393 797431 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 797510 797542 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 797786 797836 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 797870 797914 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 797996 798034 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 798179 798244 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 798401 798442 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 798560 798607 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 798797 798829 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 798836 798898 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799109 799150 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799154 799222 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799250 799303 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799313 799372 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799406 799447 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_29 Pfam protein_match 799463 799492 . - . Parent=LTnewLM_290024600.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_29 AUGUSTUS gene 800868 804158 1 - . ID=LTnewLM_290024700 LTnewLM_29 AUGUSTUS mRNA 800868 804158 1 - . ID=LTnewLM_290024700.1;Parent=LTnewLM_290024700 LTnewLM_29 AUGUSTUS CDS 800868 804158 1 - 0 ID=LTnewLM_290024700.1:CDS:1;Parent=LTnewLM_290024700.1 ### LTnewLM_29 . polypeptide 800868 804158 . - . ID=LTnewLM_290024700.1:pep;Derives_from=LTnewLM_290024700.1;orthologous_to=LmjF.29.1710_mRNA;ortholog_cluster=OG0003866;product=term%3DMutS domain III/MutS domain V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05192|Pfam:PF00488;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_29 Pfam protein_match 801804 801935 . - . Parent=LTnewLM_290024700.1:pep;Name=PF00488;signature_desc=MutS domain V;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_29 Pfam protein_match 802149 803390 . - . Parent=LTnewLM_290024700.1:pep;Name=PF05192;signature_desc=MutS domain III;Ontology_term=GO:0005524,GO:0030983,GO:0006298 ### LTnewLM_29 AUGUSTUS gene 805068 805466 1 - . ID=LTnewLM_290024800 LTnewLM_29 AUGUSTUS mRNA 805068 805466 1 - . ID=LTnewLM_290024800.1;Parent=LTnewLM_290024800 LTnewLM_29 AUGUSTUS CDS 805068 805466 1 - 0 ID=LTnewLM_290024800.1:CDS:1;Parent=LTnewLM_290024800.1 ### LTnewLM_29 . polypeptide 805068 805466 . - . ID=LTnewLM_290024800.1:pep;Derives_from=LTnewLM_290024800.1;orthologous_to=LTnewLM_210017000.1,LTnewLM_210017100.1,LTnewLM_210017200.1,LTnewLM_290024900.1,LTnewLM_290025000.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DC-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16211 LTnewLM_29 Pfam protein_match 805089 805184 . - . Parent=LTnewLM_290024800.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_29 AUGUSTUS gene 806661 807059 1 - . ID=LTnewLM_290024900 LTnewLM_29 AUGUSTUS mRNA 806661 807059 1 - . ID=LTnewLM_290024900.1;Parent=LTnewLM_290024900 LTnewLM_29 AUGUSTUS CDS 806661 807059 1 - 0 ID=LTnewLM_290024900.1:CDS:1;Parent=LTnewLM_290024900.1 ### LTnewLM_29 . polypeptide 806661 807059 . - . ID=LTnewLM_290024900.1:pep;Derives_from=LTnewLM_290024900.1;orthologous_to=LTnewLM_210017000.1,LTnewLM_210017100.1,LTnewLM_210017200.1,LTnewLM_290024800.1,LTnewLM_290025000.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DC-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16211 LTnewLM_29 Pfam protein_match 806682 806771 . - . Parent=LTnewLM_290024900.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_29 AUGUSTUS gene 807709 808107 1 - . ID=LTnewLM_290025000 LTnewLM_29 AUGUSTUS mRNA 807709 808107 1 - . ID=LTnewLM_290025000.1;Parent=LTnewLM_290025000 LTnewLM_29 AUGUSTUS CDS 807709 808107 1 - 0 ID=LTnewLM_290025000.1:CDS:1;Parent=LTnewLM_290025000.1 ### LTnewLM_29 . polypeptide 807709 808107 . - . ID=LTnewLM_290025000.1:pep;Derives_from=LTnewLM_290025000.1;orthologous_to=LTnewLM_210017000.1,LTnewLM_210017100.1,LTnewLM_210017200.1,LTnewLM_290024800.1,LTnewLM_290024900.1,LmjF.29.1720_mRNA,LmjF.29.1740_mRNA;ortholog_cluster=OG0000026;product=term%3DC-terminus of histone H2A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16211 LTnewLM_29 Pfam protein_match 807730 807819 . - . Parent=LTnewLM_290025000.1:pep;Name=PF16211;signature_desc=C-terminus of histone H2A ### LTnewLM_29 AUGUSTUS gene 810404 812179 1 - . ID=LTnewLM_290025100 LTnewLM_29 AUGUSTUS mRNA 810404 812179 1 - . ID=LTnewLM_290025100.1;Parent=LTnewLM_290025100 LTnewLM_29 AUGUSTUS CDS 810404 812179 1 - 0 ID=LTnewLM_290025100.1:CDS:1;Parent=LTnewLM_290025100.1 ### LTnewLM_29 . polypeptide 810404 812179 . - . ID=LTnewLM_290025100.1:pep;Derives_from=LTnewLM_290025100.1;orthologous_to=LTnewLM_290025200.1,LTnewLM_290025300.1,LTnewLM_290025400.1,LmjF.29.1750_mRNA,LmjF.29.1760_mRNA,LmjF.29.1770_mRNA;ortholog_cluster=OG0000041;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_29 Pfam protein_match 810545 811402 . - . Parent=LTnewLM_290025100.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_29 AUGUSTUS gene 814392 816179 1 - . ID=LTnewLM_290025200 LTnewLM_29 AUGUSTUS mRNA 814392 816179 1 - . ID=LTnewLM_290025200.1;Parent=LTnewLM_290025200 LTnewLM_29 AUGUSTUS CDS 814392 816179 1 - 0 ID=LTnewLM_290025200.1:CDS:1;Parent=LTnewLM_290025200.1 ### LTnewLM_29 . polypeptide 814392 816179 . - . ID=LTnewLM_290025200.1:pep;Derives_from=LTnewLM_290025200.1;orthologous_to=LTnewLM_290025100.1,LTnewLM_290025300.1,LTnewLM_290025400.1,LmjF.29.1750_mRNA,LmjF.29.1760_mRNA,LmjF.29.1770_mRNA;ortholog_cluster=OG0000041;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_29 Pfam protein_match 814545 815402 . - . Parent=LTnewLM_290025200.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_29 AUGUSTUS gene 818412 820199 1 - . ID=LTnewLM_290025300 LTnewLM_29 AUGUSTUS mRNA 818412 820199 1 - . ID=LTnewLM_290025300.1;Parent=LTnewLM_290025300 LTnewLM_29 AUGUSTUS CDS 818412 820199 1 - 0 ID=LTnewLM_290025300.1:CDS:1;Parent=LTnewLM_290025300.1 ### LTnewLM_29 . polypeptide 818412 820199 . - . ID=LTnewLM_290025300.1:pep;Derives_from=LTnewLM_290025300.1;orthologous_to=LTnewLM_290025100.1,LTnewLM_290025200.1,LTnewLM_290025400.1,LmjF.29.1750_mRNA,LmjF.29.1760_mRNA,LmjF.29.1770_mRNA;ortholog_cluster=OG0000041;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_29 Pfam protein_match 818565 819422 . - . Parent=LTnewLM_290025300.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_29 AUGUSTUS gene 822411 824198 1 - . ID=LTnewLM_290025400 LTnewLM_29 AUGUSTUS mRNA 822411 824198 1 - . ID=LTnewLM_290025400.1;Parent=LTnewLM_290025400 LTnewLM_29 AUGUSTUS CDS 822411 824198 1 - 0 ID=LTnewLM_290025400.1:CDS:1;Parent=LTnewLM_290025400.1 ### LTnewLM_29 . polypeptide 822411 824198 . - . ID=LTnewLM_290025400.1:pep;Derives_from=LTnewLM_290025400.1;orthologous_to=LTnewLM_290025100.1,LTnewLM_290025200.1,LTnewLM_290025300.1,LmjF.29.1750_mRNA,LmjF.29.1760_mRNA,LmjF.29.1770_mRNA;ortholog_cluster=OG0000041;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_29 Pfam protein_match 822564 823421 . - . Parent=LTnewLM_290025400.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_29 AUGUSTUS gene 825458 826579 1 - . ID=LTnewLM_290025500 LTnewLM_29 AUGUSTUS mRNA 825458 826579 1 - . ID=LTnewLM_290025500.1;Parent=LTnewLM_290025500 LTnewLM_29 AUGUSTUS CDS 825458 826579 1 - 0 ID=LTnewLM_290025500.1:CDS:1;Parent=LTnewLM_290025500.1 ### LTnewLM_29 . polypeptide 825458 826579 . - . ID=LTnewLM_290025500.1:pep;Derives_from=LTnewLM_290025500.1;orthologous_to=LmjF.29.1780_mRNA;ortholog_cluster=OG0003867;product=term%3DPutative diphthamide synthesis protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01866 LTnewLM_29 Pfam protein_match 825521 826432 . - . Parent=LTnewLM_290025500.1:pep;Name=PF01866;signature_desc=Putative diphthamide synthesis protein ### LTnewLM_29 AUGUSTUS gene 827418 830921 1 - . ID=LTnewLM_290025600 LTnewLM_29 AUGUSTUS mRNA 827418 830921 1 - . ID=LTnewLM_290025600.1;Parent=LTnewLM_290025600 LTnewLM_29 AUGUSTUS CDS 827418 830921 1 - 0 ID=LTnewLM_290025600.1:CDS:1;Parent=LTnewLM_290025600.1 ### LTnewLM_29 . polypeptide 827418 830921 . - . ID=LTnewLM_290025600.1:pep;Derives_from=LTnewLM_290025600.1;orthologous_to=LmjF.29.1790_mRNA;ortholog_cluster=OG0003868;product=term%3DRegulator of Ty1 transposition protein 107 BRCT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16770 LTnewLM_29 Pfam protein_match 827898 828044 . - . Parent=LTnewLM_290025600.1:pep;Name=PF16770;signature_desc=Regulator of Ty1 transposition protein 107 BRCT domain ### LTnewLM_29 AUGUSTUS gene 832675 833067 1 - . ID=LTnewLM_290025700 LTnewLM_29 AUGUSTUS mRNA 832675 833067 1 - . ID=LTnewLM_290025700.1;Parent=LTnewLM_290025700 LTnewLM_29 AUGUSTUS CDS 832675 833067 1 - 0 ID=LTnewLM_290025700.1:CDS:1;Parent=LTnewLM_290025700.1 ### LTnewLM_29 . polypeptide 832675 833067 . - . ID=LTnewLM_290025700.1:pep;Derives_from=LTnewLM_290025700.1;orthologous_to=LTnewLM_110019200.1,LmjF.11.1190_mRNA,LmjF.29.1800_mRNA;ortholog_cluster=OG0000114;product=term%3DRibosomal protein S8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00410;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_29 Pfam protein_match 832681 833049 . - . Parent=LTnewLM_290025700.1:pep;Name=PF00410;signature_desc=Ribosomal protein S8;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 835539 837401 1 - . ID=LTnewLM_290025800 LTnewLM_29 AUGUSTUS mRNA 835539 837401 1 - . ID=LTnewLM_290025800.1;Parent=LTnewLM_290025800 LTnewLM_29 AUGUSTUS CDS 835539 837401 1 - 0 ID=LTnewLM_290025800.1:CDS:1;Parent=LTnewLM_290025800.1 ### LTnewLM_29 . polypeptide 835539 837401 . - . ID=LTnewLM_290025800.1:pep;Derives_from=LTnewLM_290025800.1;orthologous_to=LmjF.29.1810_mRNA;ortholog_cluster=OG0003869;product=term%3DVesicle coat protein involved in Golgi to plasma membrane transport%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11704 LTnewLM_29 Pfam protein_match 836841 837107 . - . Parent=LTnewLM_290025800.1:pep;Name=PF11704;signature_desc=Vesicle coat protein involved in Golgi to plasma membrane transport ### LTnewLM_29 Liftoff gene 838107 839528 . - . ID=LTnewLM_290025900;coverage=1.0;sequence_ID=0.949;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.1820_0 LTnewLM_29 Liftoff mRNA 838107 839528 . - . ID=LTnewLM_290025900.1;Parent=LTnewLM_290025900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 838107 839528 . - 0 ID=LTnewLM_290025900.1:CDS:1;Parent=LTnewLM_290025900.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 838107 839528 . - . ID=LTnewLM_290025900.1:pep;Derives_from=LTnewLM_290025900.1;orthologous_to=LmjF.29.1820_mRNA;ortholog_cluster=OG0003870;product=term%3DOmp85 superfamily domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01103;Ontology_term=GO:0019867 LTnewLM_29 Pfam protein_match 838197 838772 . - . Parent=LTnewLM_290025900.1:pep;Name=PF01103;signature_desc=Omp85 superfamily domain;Ontology_term=GO:0019867 ### LTnewLM_29 AUGUSTUS gene 840059 841585 1 - . ID=LTnewLM_290026000 LTnewLM_29 AUGUSTUS mRNA 840059 841585 1 - . ID=LTnewLM_290026000.1;Parent=LTnewLM_290026000 LTnewLM_29 AUGUSTUS CDS 840059 841585 1 - 0 ID=LTnewLM_290026000.1:CDS:1;Parent=LTnewLM_290026000.1 ### LTnewLM_29 . polypeptide 840059 841585 . - . ID=LTnewLM_290026000.1:pep;Derives_from=LTnewLM_290026000.1;orthologous_to=LmjF.29.1830_mRNA;ortholog_cluster=OG0003871;product=term%3DPyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase/Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF12831|Pfam:PF13434|Pfam:PF00070|Pfam:PF02852;Ontology_term=GO:0055114,GO:0016491,GO:0050660,GO:0045454 LTnewLM_29 Pfam protein_match 840182 840499 . - . Parent=LTnewLM_290026000.1:pep;Name=PF02852;signature_desc=Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain;Ontology_term=GO:0045454,GO:0055114 LTnewLM_29 Pfam protein_match 840575 841552 . - . Parent=LTnewLM_290026000.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_29 Pfam protein_match 840824 841036 . - . Parent=LTnewLM_290026000.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 LTnewLM_29 Pfam protein_match 840911 841195 . - . Parent=LTnewLM_290026000.1:pep;Name=PF13434;signature_desc=L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase LTnewLM_29 Pfam protein_match 841127 841549 . - . Parent=LTnewLM_290026000.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase ### LTnewLM_29 Aragorn_1.2.36 gene 842571 842653 . - . ID=LTnewLM_290026100 LTnewLM_29 Aragorn_1.2.36 tRNA 842571 842653 . - . ID=LTnewLM_290026100:tRNA;Parent=LTnewLM_290026100;aa=Leu;anticodon=caa;gc_content=60.2 ### LTnewLM_29 Aragorn_1.2.36 gene 842713 842793 . - . ID=LTnewLM_290026200 LTnewLM_29 Aragorn_1.2.36 tRNA 842713 842793 . - . ID=LTnewLM_290026200:tRNA;Parent=LTnewLM_290026200;aa=Ser;anticodon=cga;gc_content=54.3 ### LTnewLM_29 AUGUSTUS gene 843468 844466 1 - . ID=LTnewLM_290026300 LTnewLM_29 AUGUSTUS mRNA 843468 844466 1 - . ID=LTnewLM_290026300.1;Parent=LTnewLM_290026300 LTnewLM_29 AUGUSTUS CDS 843468 844466 1 - 0 ID=LTnewLM_290026300.1:CDS:1;Parent=LTnewLM_290026300.1 ### LTnewLM_29 . polypeptide 843468 844466 . - . ID=LTnewLM_290026300.1:pep;Derives_from=LTnewLM_290026300.1;orthologous_to=LmjF.29.1840_mRNA;ortholog_cluster=OG0003872;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 845394 846236 1 - . ID=LTnewLM_290026400 LTnewLM_29 AUGUSTUS mRNA 845394 846236 1 - . ID=LTnewLM_290026400.1;Parent=LTnewLM_290026400 LTnewLM_29 AUGUSTUS CDS 845394 846236 1 - 0 ID=LTnewLM_290026400.1:CDS:1;Parent=LTnewLM_290026400.1 ### LTnewLM_29 . polypeptide 845394 846236 . - . ID=LTnewLM_290026400.1:pep;Derives_from=LTnewLM_290026400.1;orthologous_to=LmjF.29.1850_mRNA;ortholog_cluster=OG0003873;product=term%3DPIH1 CS-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18201 LTnewLM_29 Pfam protein_match 845439 845651 . - . Parent=LTnewLM_290026400.1:pep;Name=PF18201;signature_desc=PIH1 CS-like domain ### LTnewLM_29 AUGUSTUS gene 846737 848401 1 - . ID=LTnewLM_290026500 LTnewLM_29 AUGUSTUS mRNA 846737 848401 1 - . ID=LTnewLM_290026500.1;Parent=LTnewLM_290026500 LTnewLM_29 AUGUSTUS CDS 846737 848401 1 - 0 ID=LTnewLM_290026500.1:CDS:1;Parent=LTnewLM_290026500.1 ### LTnewLM_29 . polypeptide 846737 848401 . - . ID=LTnewLM_290026500.1:pep;Derives_from=LTnewLM_290026500.1;orthologous_to=LmjF.29.1860_mRNA;ortholog_cluster=OG0003874;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 850693 851019 1 - . ID=LTnewLM_290026600 LTnewLM_29 AUGUSTUS mRNA 850693 851019 1 - . ID=LTnewLM_290026600.1;Parent=LTnewLM_290026600 LTnewLM_29 AUGUSTUS CDS 850693 851019 1 - 0 ID=LTnewLM_290026600.1:CDS:1;Parent=LTnewLM_290026600.1 ### LTnewLM_29 . polypeptide 850693 851019 . - . ID=LTnewLM_290026600.1:pep;Derives_from=LTnewLM_290026600.1;orthologous_to=LmjF.29.1870_mRNA;ortholog_cluster=OG0003875;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 852432 855638 1 - . ID=LTnewLM_290026700 LTnewLM_29 AUGUSTUS mRNA 852432 855638 1 - . ID=LTnewLM_290026700.1;Parent=LTnewLM_290026700 LTnewLM_29 AUGUSTUS CDS 852432 855638 1 - 0 ID=LTnewLM_290026700.1:CDS:1;Parent=LTnewLM_290026700.1 ### LTnewLM_29 . polypeptide 852432 855638 . - . ID=LTnewLM_290026700.1:pep;Derives_from=LTnewLM_290026700.1;orthologous_to=LmjF.29.1880_mRNA;ortholog_cluster=OG0003876;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 857471 858661 1 - . ID=LTnewLM_290026800 LTnewLM_29 AUGUSTUS mRNA 857471 858661 1 - . ID=LTnewLM_290026800.1;Parent=LTnewLM_290026800 LTnewLM_29 AUGUSTUS CDS 857471 858661 1 - 0 ID=LTnewLM_290026800.1:CDS:1;Parent=LTnewLM_290026800.1 ### LTnewLM_29 . polypeptide 857471 858661 . - . ID=LTnewLM_290026800.1:pep;Derives_from=LTnewLM_290026800.1;orthologous_to=LmjF.29.1890_mRNA;ortholog_cluster=OG0003877;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_29 Pfam protein_match 858464 858610 . - . Parent=LTnewLM_290026800.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_29 AUGUSTUS gene 859302 860645 1 - . ID=LTnewLM_290026900 LTnewLM_29 AUGUSTUS mRNA 859302 860645 1 - . ID=LTnewLM_290026900.1;Parent=LTnewLM_290026900 LTnewLM_29 AUGUSTUS CDS 859302 860645 1 - 0 ID=LTnewLM_290026900.1:CDS:1;Parent=LTnewLM_290026900.1 ### LTnewLM_29 . polypeptide 859302 860645 . - . ID=LTnewLM_290026900.1:pep;Derives_from=LTnewLM_290026900.1;orthologous_to=LmjF.29.1900_mRNA;ortholog_cluster=OG0003878;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 861439 862818 1 - . ID=LTnewLM_290027000 LTnewLM_29 AUGUSTUS mRNA 861439 862818 1 - . ID=LTnewLM_290027000.1;Parent=LTnewLM_290027000 LTnewLM_29 AUGUSTUS CDS 861439 862818 1 - 0 ID=LTnewLM_290027000.1:CDS:1;Parent=LTnewLM_290027000.1 ### LTnewLM_29 . polypeptide 861439 862818 . - . ID=LTnewLM_290027000.1:pep;Derives_from=LTnewLM_290027000.1;orthologous_to=LmjF.29.1910_mRNA;ortholog_cluster=OG0003879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 863526 864353 1 - . ID=LTnewLM_290027100 LTnewLM_29 AUGUSTUS mRNA 863526 864353 1 - . ID=LTnewLM_290027100.1;Parent=LTnewLM_290027100 LTnewLM_29 AUGUSTUS CDS 863526 864353 1 - 0 ID=LTnewLM_290027100.1:CDS:1;Parent=LTnewLM_290027100.1 ### LTnewLM_29 . polypeptide 863526 864353 . - . ID=LTnewLM_290027100.1:pep;Derives_from=LTnewLM_290027100.1;orthologous_to=LmjF.29.1920_mRNA;ortholog_cluster=OG0003880;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 865157 866974 1 - . ID=LTnewLM_290027200 LTnewLM_29 AUGUSTUS mRNA 865157 866974 1 - . ID=LTnewLM_290027200.1;Parent=LTnewLM_290027200 LTnewLM_29 AUGUSTUS CDS 865157 866974 1 - 0 ID=LTnewLM_290027200.1:CDS:1;Parent=LTnewLM_290027200.1 ### LTnewLM_29 . polypeptide 865157 866974 . - . ID=LTnewLM_290027200.1:pep;Derives_from=LTnewLM_290027200.1;orthologous_to=LmjF.29.1930_mRNA;ortholog_cluster=OG0003881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 867784 868404 1 - . ID=LTnewLM_290027300 LTnewLM_29 AUGUSTUS mRNA 867784 868404 1 - . ID=LTnewLM_290027300.1;Parent=LTnewLM_290027300 LTnewLM_29 AUGUSTUS CDS 867784 868404 1 - 0 ID=LTnewLM_290027300.1:CDS:1;Parent=LTnewLM_290027300.1 ### LTnewLM_29 . polypeptide 867784 868404 . - . ID=LTnewLM_290027300.1:pep;Derives_from=LTnewLM_290027300.1;orthologous_to=LmjF.29.1940_mRNA;ortholog_cluster=OG0003882;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 Liftoff gene 872782 875076 . - . ID=LTnewLM_290027400;coverage=1.0;sequence_ID=0.939;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.1950_0 LTnewLM_29 Liftoff mRNA 872782 875076 . - . ID=LTnewLM_290027400.1;Parent=LTnewLM_290027400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 872782 875076 . - 0 ID=LTnewLM_290027400.1:CDS:1;Parent=LTnewLM_290027400.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 872782 875076 . - . ID=LTnewLM_290027400.1:pep;Derives_from=LTnewLM_290027400.1;orthologous_to=LmjF.29.1950_mRNA;ortholog_cluster=OG0003883;product=term%3DProtein prenyltransferase alpha subunit repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01239;Ontology_term=GO:0018342,GO:0008318 LTnewLM_29 Pfam protein_match 873787 873870 . - . Parent=LTnewLM_290027400.1:pep;Name=PF01239;signature_desc=Protein prenyltransferase alpha subunit repeat;Ontology_term=GO:0008318,GO:0018342 LTnewLM_29 Pfam protein_match 874309 874389 . - . Parent=LTnewLM_290027400.1:pep;Name=PF01239;signature_desc=Protein prenyltransferase alpha subunit repeat;Ontology_term=GO:0008318,GO:0018342 ### LTnewLM_29 AUGUSTUS gene 877608 879314 1 - . ID=LTnewLM_290027500 LTnewLM_29 AUGUSTUS mRNA 877608 879314 1 - . ID=LTnewLM_290027500.1;Parent=LTnewLM_290027500 LTnewLM_29 AUGUSTUS CDS 877608 879314 1 - 0 ID=LTnewLM_290027500.1:CDS:1;Parent=LTnewLM_290027500.1 ### LTnewLM_29 . polypeptide 877608 879314 . - . ID=LTnewLM_290027500.1:pep;Derives_from=LTnewLM_290027500.1;orthologous_to=LmjF.29.1960_mRNA;ortholog_cluster=OG0003884;product=term%3DFumarate hydratase (Fumerase)/Fumarase C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05681|Pfam:PF05683;Ontology_term=GO:0016836,GO:0016829 LTnewLM_29 Pfam protein_match 877623 878237 . - . Parent=LTnewLM_290027500.1:pep;Name=PF05683;signature_desc=Fumarase C-terminus;Ontology_term=GO:0016836 LTnewLM_29 Pfam protein_match 878259 879080 . - . Parent=LTnewLM_290027500.1:pep;Name=PF05681;signature_desc=Fumarate hydratase (Fumerase);Ontology_term=GO:0016829 ### LTnewLM_29 Liftoff gene 880577 880977 . - . ID=LTnewLM_290027600;coverage=0.934;sequence_ID=0.864;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.1970_0 LTnewLM_29 Liftoff mRNA 880577 880977 . - . ID=LTnewLM_290027600.1;Parent=LTnewLM_290027600;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 880577 880977 . - 0 ID=LTnewLM_290027600.1:CDS:1;Parent=LTnewLM_290027600.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 880577 880977 . - . ID=LTnewLM_290027600.1:pep;Derives_from=LTnewLM_290027600.1;orthologous_to=LmjF.29.1970_mRNA;ortholog_cluster=OG0003885;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 881049 881653 0.45 - . ID=LTnewLM_290027700 LTnewLM_29 AUGUSTUS mRNA 881049 881653 0.45 - . ID=LTnewLM_290027700.1;Parent=LTnewLM_290027700 LTnewLM_29 AUGUSTUS CDS 881049 881446 0.45 - 2 ID=LTnewLM_290027700.1:CDS:1;Parent=LTnewLM_290027700.1 LTnewLM_29 AUGUSTUS CDS 881515 881653 0.55 - 0 ID=LTnewLM_290027700.1:CDS:2;Parent=LTnewLM_290027700.1 ### LTnewLM_29 . polypeptide 881049 881653 . - . ID=LTnewLM_290027700.1:pep;Derives_from=LTnewLM_290027700.1;product=term%3Dhypothetical protein ### LTnewLM_29 AUGUSTUS gene 883096 888915 1 - . ID=LTnewLM_290027800 LTnewLM_29 AUGUSTUS mRNA 883096 888915 1 - . ID=LTnewLM_290027800.1;Parent=LTnewLM_290027800 LTnewLM_29 AUGUSTUS CDS 883096 888915 1 - 0 ID=LTnewLM_290027800.1:CDS:1;Parent=LTnewLM_290027800.1 ### LTnewLM_29 . polypeptide 883096 888915 . - . ID=LTnewLM_290027800.1:pep;Derives_from=LTnewLM_290027800.1;orthologous_to=LmjF.29.1980_mRNA;ortholog_cluster=OG0003886;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 890622 892232 1 - . ID=LTnewLM_290027900 LTnewLM_29 AUGUSTUS mRNA 890622 892232 1 - . ID=LTnewLM_290027900.1;Parent=LTnewLM_290027900 LTnewLM_29 AUGUSTUS CDS 890622 892232 1 - 0 ID=LTnewLM_290027900.1:CDS:1;Parent=LTnewLM_290027900.1 ### LTnewLM_29 . polypeptide 890622 892232 . - . ID=LTnewLM_290027900.1:pep;Derives_from=LTnewLM_290027900.1;orthologous_to=LmjF.29.1990_mRNA;ortholog_cluster=OG0003887;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 892785 893894 1 - . ID=LTnewLM_290028000 LTnewLM_29 AUGUSTUS mRNA 892785 893894 1 - . ID=LTnewLM_290028000.1;Parent=LTnewLM_290028000 LTnewLM_29 AUGUSTUS CDS 892785 893894 1 - 0 ID=LTnewLM_290028000.1:CDS:1;Parent=LTnewLM_290028000.1 ### LTnewLM_29 . polypeptide 892785 893894 . - . ID=LTnewLM_290028000.1:pep;Derives_from=LTnewLM_290028000.1;orthologous_to=LmjF.29.1995_mRNA;ortholog_cluster=OG0003888;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 894280 896392 . - . ID=LTnewLM_290028100:pseudogene;coverage=0.990;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2000_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 894280 896392 . - . ID=LTnewLM_290028100.1;Parent=LTnewLM_290028100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 894280 896392 . - . ID=LTnewLM_290028100.1:pseudogenic_exon:1;Parent=LTnewLM_290028100.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 894280 896392 . - . ID=LTnewLM_290028100.1:pep;Derives_from=LTnewLM_290028100.1;orthologous_to=LmjF.29.2000_mRNA;ortholog_cluster=OG0007581;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_29 Pfam protein_match 894722 894865 . - . Parent=LTnewLM_290028100.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_29 AUGUSTUS gene 897012 899126 1 - . ID=LTnewLM_290028200 LTnewLM_29 AUGUSTUS mRNA 897012 899126 1 - . ID=LTnewLM_290028200.1;Parent=LTnewLM_290028200 LTnewLM_29 AUGUSTUS CDS 897012 899126 1 - 0 ID=LTnewLM_290028200.1:CDS:1;Parent=LTnewLM_290028200.1 ### LTnewLM_29 . polypeptide 897012 899126 . - . ID=LTnewLM_290028200.1:pep;Derives_from=LTnewLM_290028200.1;orthologous_to=LmjF.29.2010_mRNA;ortholog_cluster=OG0003889;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 901279 903726 1 - . ID=LTnewLM_290028300 LTnewLM_29 AUGUSTUS mRNA 901279 903726 1 - . ID=LTnewLM_290028300.1;Parent=LTnewLM_290028300 LTnewLM_29 AUGUSTUS CDS 901279 903726 1 - 0 ID=LTnewLM_290028300.1:CDS:1;Parent=LTnewLM_290028300.1 ### LTnewLM_29 . polypeptide 901279 903726 . - . ID=LTnewLM_290028300.1:pep;Derives_from=LTnewLM_290028300.1;orthologous_to=LmjF.29.2020_mRNA;ortholog_cluster=OG0003890;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 902866 903621 . - . Parent=LTnewLM_290028300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 902881 903615 . - . Parent=LTnewLM_290028300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_29 Pfam protein_match 903016 903318 . - . Parent=LTnewLM_290028300.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_29 Pfam protein_match 903184 903411 . - . Parent=LTnewLM_290028300.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_29 . pseudogene 905688 908353 . - . ID=LTnewLM_290028400:pseudogene;coverage=0.999;sequence_ID=0.952;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2030_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 905688 908353 . - . ID=LTnewLM_290028400.1;Parent=LTnewLM_290028400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 905688 908353 . - . ID=LTnewLM_290028400.1:pseudogenic_exon:1;Parent=LTnewLM_290028400.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 905688 908353 . - . ID=LTnewLM_290028400.1:pep;Derives_from=LTnewLM_290028400.1;orthologous_to=LmjF.29.2030_mRNA;ortholog_cluster=OG0007582;product=term%3DN-acetylglucosaminyl transferase component (Gpi1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05024;Ontology_term=GO:0006506,GO:0016021,GO:0017176 LTnewLM_29 Pfam protein_match 906059 906988 . - . Parent=LTnewLM_290028400.1:pep;Name=PF05024;signature_desc=N-acetylglucosaminyl transferase component (Gpi1);Ontology_term=GO:0017176,GO:0006506,GO:0016021 ### LTnewLM_29 AUGUSTUS gene 909200 913063 1 - . ID=LTnewLM_290028500 LTnewLM_29 AUGUSTUS mRNA 909200 913063 1 - . ID=LTnewLM_290028500.1;Parent=LTnewLM_290028500 LTnewLM_29 AUGUSTUS CDS 909200 913063 1 - 0 ID=LTnewLM_290028500.1:CDS:1;Parent=LTnewLM_290028500.1 ### LTnewLM_29 . polypeptide 909200 913063 . - . ID=LTnewLM_290028500.1:pep;Derives_from=LTnewLM_290028500.1;orthologous_to=LmjF.29.2040_mRNA;ortholog_cluster=OG0003891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 917464 919701 1 - . ID=LTnewLM_290028600 LTnewLM_29 AUGUSTUS mRNA 917464 919701 1 - . ID=LTnewLM_290028600.1;Parent=LTnewLM_290028600 LTnewLM_29 AUGUSTUS CDS 917464 919701 1 - 0 ID=LTnewLM_290028600.1:CDS:1;Parent=LTnewLM_290028600.1 ### LTnewLM_29 . polypeptide 917464 919701 . - . ID=LTnewLM_290028600.1:pep;Derives_from=LTnewLM_290028600.1;orthologous_to=LmjF.29.2050_mRNA;ortholog_cluster=OG0003892;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 924180 927485 . - . ID=LTnewLM_290028700:pseudogene;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2060_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 924180 927485 . - . ID=LTnewLM_290028700.1;Parent=LTnewLM_290028700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 924180 927485 . - . ID=LTnewLM_290028700.1:pseudogenic_exon:1;Parent=LTnewLM_290028700.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 924180 927485 . - . ID=LTnewLM_290028700.1:pep;Derives_from=LTnewLM_290028700.1;orthologous_to=LmjF.29.2060_mRNA;ortholog_cluster=OG0007583;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 928422 929750 1 - . ID=LTnewLM_290028800 LTnewLM_29 AUGUSTUS mRNA 928422 929750 1 - . ID=LTnewLM_290028800.1;Parent=LTnewLM_290028800 LTnewLM_29 AUGUSTUS CDS 928422 929750 1 - 0 ID=LTnewLM_290028800.1:CDS:1;Parent=LTnewLM_290028800.1 ### LTnewLM_29 . polypeptide 928422 929750 . - . ID=LTnewLM_290028800.1:pep;Derives_from=LTnewLM_290028800.1;orthologous_to=LmjF.29.2070_mRNA;ortholog_cluster=OG0003893;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 930638 931993 1 - . ID=LTnewLM_290028900 LTnewLM_29 AUGUSTUS mRNA 930638 931993 1 - . ID=LTnewLM_290028900.1;Parent=LTnewLM_290028900 LTnewLM_29 AUGUSTUS CDS 930638 931993 1 - 0 ID=LTnewLM_290028900.1:CDS:1;Parent=LTnewLM_290028900.1 ### LTnewLM_29 . polypeptide 930638 931993 . - . ID=LTnewLM_290028900.1:pep;Derives_from=LTnewLM_290028900.1;orthologous_to=LmjF.29.2080_mRNA;ortholog_cluster=OG0003894;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 934034 938842 1 - . ID=LTnewLM_290029000 LTnewLM_29 AUGUSTUS mRNA 934034 938842 1 - . ID=LTnewLM_290029000.1;Parent=LTnewLM_290029000 LTnewLM_29 AUGUSTUS CDS 934034 938842 1 - 0 ID=LTnewLM_290029000.1:CDS:1;Parent=LTnewLM_290029000.1 ### LTnewLM_29 . polypeptide 934034 938842 . - . ID=LTnewLM_290029000.1:pep;Derives_from=LTnewLM_290029000.1;orthologous_to=LmjF.29.2090_mRNA;ortholog_cluster=OG0003895;product=term%3DAAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13086|Pfam:PF13087 LTnewLM_29 Pfam protein_match 934397 934969 . - . Parent=LTnewLM_290029000.1:pep;Name=PF13087;signature_desc=AAA domain LTnewLM_29 Pfam protein_match 935006 935269 . - . Parent=LTnewLM_290029000.1:pep;Name=PF13086;signature_desc=AAA domain ### LTnewLM_29 AUGUSTUS gene 942003 943925 1 - . ID=LTnewLM_290029100 LTnewLM_29 AUGUSTUS mRNA 942003 943925 1 - . ID=LTnewLM_290029100.1;Parent=LTnewLM_290029100 LTnewLM_29 AUGUSTUS CDS 942003 943925 1 - 0 ID=LTnewLM_290029100.1:CDS:1;Parent=LTnewLM_290029100.1 ### LTnewLM_29 . polypeptide 942003 943925 . - . ID=LTnewLM_290029100.1:pep;Derives_from=LTnewLM_290029100.1;orthologous_to=LmjF.29.2100_mRNA;ortholog_cluster=OG0003896;product=term%3DDomain of unknown function (DUF4139)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13598 LTnewLM_29 Pfam protein_match 942033 943082 . - . Parent=LTnewLM_290029100.1:pep;Name=PF13598;signature_desc=Domain of unknown function (DUF4139) ### LTnewLM_29 AUGUSTUS gene 944896 945120 1 - . ID=LTnewLM_290029200 LTnewLM_29 AUGUSTUS mRNA 944896 945120 1 - . ID=LTnewLM_290029200.1;Parent=LTnewLM_290029200 LTnewLM_29 AUGUSTUS CDS 944896 945120 1 - 0 ID=LTnewLM_290029200.1:CDS:1;Parent=LTnewLM_290029200.1 ### LTnewLM_29 . polypeptide 944896 945120 . - . ID=LTnewLM_290029200.1:pep;Derives_from=LTnewLM_290029200.1;orthologous_to=LTnewLM_230023600.1,LTnewLM_300035900.1,LTnewLM_330026600.1,LTnewLM_330027000.1,LTnewLM_350026400.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 945860 951223 1 - . ID=LTnewLM_290029300 LTnewLM_29 AUGUSTUS mRNA 945860 951223 1 - . ID=LTnewLM_290029300.1;Parent=LTnewLM_290029300 LTnewLM_29 AUGUSTUS CDS 945860 951223 1 - 0 ID=LTnewLM_290029300.1:CDS:1;Parent=LTnewLM_290029300.1 ### LTnewLM_29 . polypeptide 945860 951223 . - . ID=LTnewLM_290029300.1:pep;Derives_from=LTnewLM_290029300.1;orthologous_to=LmjF.29.2110_mRNA;ortholog_cluster=OG0003897;product=term%3DThioredoxin-like domain/UDP-glucose:Glycoprotein Glucosyltransferase/Glucosyltransferase 24/Glycosyl transferase family 8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18400|Pfam:PF18401|Pfam:PF18402|Pfam:PF06427|Pfam:PF18404|Pfam:PF01501;Ontology_term=GO:0006486,GO:0003980,GO:0016757 LTnewLM_29 Pfam protein_match 945893 946717 . - . Parent=LTnewLM_290029300.1:pep;Name=PF18404;signature_desc=Glucosyltransferase 24 LTnewLM_29 Pfam protein_match 946013 946480 . - . Parent=LTnewLM_290029300.1:pep;Name=PF01501;signature_desc=Glycosyl transferase family 8;Ontology_term=GO:0016757 LTnewLM_29 Pfam protein_match 946835 947209 . - . Parent=LTnewLM_290029300.1:pep;Name=PF06427;signature_desc=UDP-glucose:Glycoprotein Glucosyltransferase;Ontology_term=GO:0003980,GO:0006486 LTnewLM_29 Pfam protein_match 948626 949387 . - . Parent=LTnewLM_290029300.1:pep;Name=PF18402;signature_desc=Thioredoxin-like domain LTnewLM_29 Pfam protein_match 949583 949921 . - . Parent=LTnewLM_290029300.1:pep;Name=PF18401;signature_desc=Thioredoxin-like domain LTnewLM_29 Pfam protein_match 950297 951049 . - . Parent=LTnewLM_290029300.1:pep;Name=PF18400;signature_desc=Thioredoxin-like domain ### LTnewLM_29 AUGUSTUS gene 954372 955262 1 - . ID=LTnewLM_290029400 LTnewLM_29 AUGUSTUS mRNA 954372 955262 1 - . ID=LTnewLM_290029400.1;Parent=LTnewLM_290029400 LTnewLM_29 AUGUSTUS CDS 954372 955262 1 - 0 ID=LTnewLM_290029400.1:CDS:1;Parent=LTnewLM_290029400.1 ### LTnewLM_29 . polypeptide 954372 955262 . - . ID=LTnewLM_290029400.1:pep;Derives_from=LTnewLM_290029400.1;orthologous_to=LmjF.29.2120_mRNA;ortholog_cluster=OG0003898;product=term%3DVIT family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01988 LTnewLM_29 Pfam protein_match 954642 954974 . - . Parent=LTnewLM_290029400.1:pep;Name=PF01988;signature_desc=VIT family ### LTnewLM_29 AUGUSTUS gene 957419 958849 1 - . ID=LTnewLM_290029500 LTnewLM_29 AUGUSTUS mRNA 957419 958849 1 - . ID=LTnewLM_290029500.1;Parent=LTnewLM_290029500 LTnewLM_29 AUGUSTUS CDS 957419 958849 1 - 0 ID=LTnewLM_290029500.1:CDS:1;Parent=LTnewLM_290029500.1 ### LTnewLM_29 . polypeptide 957419 958849 . - . ID=LTnewLM_290029500.1:pep;Derives_from=LTnewLM_290029500.1;orthologous_to=LmjF.29.2130_mRNA;ortholog_cluster=OG0003899;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_29 Pfam protein_match 957644 957688 . - . Parent=LTnewLM_290029500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_29 AUGUSTUS gene 961769 962440 1 - . ID=LTnewLM_290029600 LTnewLM_29 AUGUSTUS mRNA 961769 962440 1 - . ID=LTnewLM_290029600.1;Parent=LTnewLM_290029600 LTnewLM_29 AUGUSTUS CDS 961769 962440 1 - 0 ID=LTnewLM_290029600.1:CDS:1;Parent=LTnewLM_290029600.1 ### LTnewLM_29 . polypeptide 961769 962440 . - . ID=LTnewLM_290029600.1:pep;Derives_from=LTnewLM_290029600.1;orthologous_to=LmjF.29.2140_mRNA;ortholog_cluster=OG0003900;product=term%3DERG2 and Sigma1 receptor like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04622 LTnewLM_29 Pfam protein_match 961778 962401 . - . Parent=LTnewLM_290029600.1:pep;Name=PF04622;signature_desc=ERG2 and Sigma1 receptor like protein ### LTnewLM_29 AUGUSTUS gene 970092 971828 1 - . ID=LTnewLM_290029700 LTnewLM_29 AUGUSTUS mRNA 970092 971828 1 - . ID=LTnewLM_290029700.1;Parent=LTnewLM_290029700 LTnewLM_29 AUGUSTUS CDS 970092 971828 1 - 0 ID=LTnewLM_290029700.1:CDS:1;Parent=LTnewLM_290029700.1 ### LTnewLM_29 . polypeptide 970092 971828 . - . ID=LTnewLM_290029700.1:pep;Derives_from=LTnewLM_290029700.1;orthologous_to=LmjF.29.2150_mRNA;ortholog_cluster=OG0003901;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 970134 971015 . - . Parent=LTnewLM_290029700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 970416 971018 . - . Parent=LTnewLM_290029700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 976430 977767 1 - . ID=LTnewLM_290029800 LTnewLM_29 AUGUSTUS mRNA 976430 977767 1 - . ID=LTnewLM_290029800.1;Parent=LTnewLM_290029800 LTnewLM_29 AUGUSTUS CDS 976430 977767 1 - 0 ID=LTnewLM_290029800.1:CDS:1;Parent=LTnewLM_290029800.1 ### LTnewLM_29 . polypeptide 976430 977767 . - . ID=LTnewLM_290029800.1:pep;Derives_from=LTnewLM_290029800.1;orthologous_to=LmjF.29.2160_mRNA;ortholog_cluster=OG0003902;product=term%3DGDP dissociation inhibitor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00996 LTnewLM_29 Pfam protein_match 976463 977767 . - . Parent=LTnewLM_290029800.1:pep;Name=PF00996;signature_desc=GDP dissociation inhibitor ### LTnewLM_29 AUGUSTUS gene 978504 980348 1 - . ID=LTnewLM_290029900 LTnewLM_29 AUGUSTUS mRNA 978504 980348 1 - . ID=LTnewLM_290029900.1;Parent=LTnewLM_290029900 LTnewLM_29 AUGUSTUS CDS 978504 980348 1 - 0 ID=LTnewLM_290029900.1:CDS:1;Parent=LTnewLM_290029900.1 ### LTnewLM_29 . polypeptide 978504 980348 . - . ID=LTnewLM_290029900.1:pep;Derives_from=LTnewLM_290029900.1;orthologous_to=LmjF.29.2170_mRNA;ortholog_cluster=OG0003903;product=term%3DDTW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03942 LTnewLM_29 Pfam protein_match 978951 979811 . - . Parent=LTnewLM_290029900.1:pep;Name=PF03942;signature_desc=DTW domain ### LTnewLM_29 Liftoff gene 981455 983059 . - . ID=LTnewLM_290030000;coverage=0.998;sequence_ID=0.924;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.2180_0 LTnewLM_29 Liftoff mRNA 981455 983059 . - . ID=LTnewLM_290030000.1;Parent=LTnewLM_290030000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 981455 983059 . - 0 ID=LTnewLM_290030000.1:CDS:1;Parent=LTnewLM_290030000.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 981455 983059 . - . ID=LTnewLM_290030000.1:pep;Derives_from=LTnewLM_290030000.1;orthologous_to=LmjF.29.2180_mRNA;ortholog_cluster=OG0003904;product=term%3DProbable Zinc-ribbon domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311 LTnewLM_29 Pfam protein_match 981491 981664 . - . Parent=LTnewLM_290030000.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_29 Pfam protein_match 981722 981889 . - . Parent=LTnewLM_290030000.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_29 Pfam protein_match 981929 982099 . - . Parent=LTnewLM_290030000.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain ### LTnewLM_29 AUGUSTUS gene 986615 990925 1 - . ID=LTnewLM_290030100 LTnewLM_29 AUGUSTUS mRNA 986615 990925 1 - . ID=LTnewLM_290030100.1;Parent=LTnewLM_290030100 LTnewLM_29 AUGUSTUS CDS 986615 990925 1 - 0 ID=LTnewLM_290030100.1:CDS:1;Parent=LTnewLM_290030100.1 ### LTnewLM_29 . polypeptide 986615 990925 . - . ID=LTnewLM_290030100.1:pep;Derives_from=LTnewLM_290030100.1;orthologous_to=LmjF.29.2190_mRNA;ortholog_cluster=OG0003905;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 994835 996925 1 - . ID=LTnewLM_290030200 LTnewLM_29 AUGUSTUS mRNA 994835 996925 1 - . ID=LTnewLM_290030200.1;Parent=LTnewLM_290030200 LTnewLM_29 AUGUSTUS CDS 994835 996925 1 - 0 ID=LTnewLM_290030200.1:CDS:1;Parent=LTnewLM_290030200.1 ### LTnewLM_29 . polypeptide 994835 996925 . - . ID=LTnewLM_290030200.1:pep;Derives_from=LTnewLM_290030200.1;orthologous_to=LmjF.29.2200_mRNA;ortholog_cluster=OG0003906;product=term%3DDynamin family/Dynamin central region/Dynamin GTPase effector domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00350|Pfam:PF01031|Pfam:PF02212;Ontology_term=GO:0005525,GO:0003924 LTnewLM_29 Pfam protein_match 994892 995161 . - . Parent=LTnewLM_290030200.1:pep;Name=PF02212;signature_desc=Dynamin GTPase effector domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_29 Pfam protein_match 995468 996289 . - . Parent=LTnewLM_290030200.1:pep;Name=PF01031;signature_desc=Dynamin central region;Ontology_term=GO:0005525 LTnewLM_29 Pfam protein_match 996314 996841 . - . Parent=LTnewLM_290030200.1:pep;Name=PF00350;signature_desc=Dynamin family ### LTnewLM_29 AUGUSTUS gene 998833 1000299 1 - . ID=LTnewLM_290030300 LTnewLM_29 AUGUSTUS mRNA 998833 1000299 1 - . ID=LTnewLM_290030300.1;Parent=LTnewLM_290030300 LTnewLM_29 AUGUSTUS CDS 998833 1000299 1 - 0 ID=LTnewLM_290030300.1:CDS:1;Parent=LTnewLM_290030300.1 ### LTnewLM_29 . polypeptide 998833 1000299 . - . ID=LTnewLM_290030300.1:pep;Derives_from=LTnewLM_290030300.1;orthologous_to=LmjF.29.2210_mRNA;ortholog_cluster=OG0003907;product=term%3DLeucine-rich repeat/Leucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580|Pfam:PF13855;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 999823 1000299 . - . Parent=LTnewLM_290030300.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat LTnewLM_29 Pfam protein_match 1000009 1000170 . - . Parent=LTnewLM_290030300.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_29 AUGUSTUS gene 1003127 1004152 1 - . ID=LTnewLM_290030400 LTnewLM_29 AUGUSTUS mRNA 1003127 1004152 1 - . ID=LTnewLM_290030400.1;Parent=LTnewLM_290030400 LTnewLM_29 AUGUSTUS CDS 1003127 1004152 1 - 0 ID=LTnewLM_290030400.1:CDS:1;Parent=LTnewLM_290030400.1 ### LTnewLM_29 . polypeptide 1003127 1004152 . - . ID=LTnewLM_290030400.1:pep;Derives_from=LTnewLM_290030400.1;orthologous_to=LmjF.29.2220_mRNA;ortholog_cluster=OG0003908;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 Liftoff gene 1005427 1007046 . - . ID=LTnewLM_290030500;coverage=0.998;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2230_0 LTnewLM_29 Liftoff mRNA 1005427 1007046 . - . ID=LTnewLM_290030500.1;Parent=LTnewLM_290030500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 1005427 1007046 . - 0 ID=LTnewLM_290030500.1:CDS:1;Parent=LTnewLM_290030500.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 1005427 1007046 . - . ID=LTnewLM_290030500.1:pep;Derives_from=LTnewLM_290030500.1;orthologous_to=LmjF.29.2230_mRNA;ortholog_cluster=OG0003909;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1009185 1011791 1 - . ID=LTnewLM_290030600 LTnewLM_29 AUGUSTUS mRNA 1009185 1011791 1 - . ID=LTnewLM_290030600.1;Parent=LTnewLM_290030600 LTnewLM_29 AUGUSTUS CDS 1009185 1011791 1 - 0 ID=LTnewLM_290030600.1:CDS:1;Parent=LTnewLM_290030600.1 ### LTnewLM_29 . polypeptide 1009185 1011791 . - . ID=LTnewLM_290030600.1:pep;Derives_from=LTnewLM_290030600.1;orthologous_to=LmjF.29.2240_mRNA;ortholog_cluster=OG0003910;product=term%3DPeptidase M1 N-terminal domain/Peptidase family M1 domain/ERAP1-like C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17900|Pfam:PF01433|Pfam:PF11838;Ontology_term=GO:0008237,GO:0008270 LTnewLM_29 Pfam protein_match 1009251 1010222 . - . Parent=LTnewLM_290030600.1:pep;Name=PF11838;signature_desc=ERAP1-like C-terminal domain LTnewLM_29 Pfam protein_match 1010472 1011107 . - . Parent=LTnewLM_290030600.1:pep;Name=PF01433;signature_desc=Peptidase family M1 domain;Ontology_term=GO:0008237,GO:0008270 LTnewLM_29 Pfam protein_match 1011210 1011650 . - . Parent=LTnewLM_290030600.1:pep;Name=PF17900;signature_desc=Peptidase M1 N-terminal domain ### LTnewLM_29 AUGUSTUS gene 1014236 1016359 1 - . ID=LTnewLM_290030700 LTnewLM_29 AUGUSTUS mRNA 1014236 1016359 1 - . ID=LTnewLM_290030700.1;Parent=LTnewLM_290030700 LTnewLM_29 AUGUSTUS CDS 1014236 1016359 1 - 0 ID=LTnewLM_290030700.1:CDS:1;Parent=LTnewLM_290030700.1 ### LTnewLM_29 . polypeptide 1014236 1016359 . - . ID=LTnewLM_290030700.1:pep;Derives_from=LTnewLM_290030700.1;orthologous_to=LmjF.29.2250_mRNA;ortholog_cluster=OG0003911;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1017395 1018357 1 - . ID=LTnewLM_290030800 LTnewLM_29 AUGUSTUS mRNA 1017395 1018357 1 - . ID=LTnewLM_290030800.1;Parent=LTnewLM_290030800 LTnewLM_29 AUGUSTUS CDS 1017395 1018357 1 - 0 ID=LTnewLM_290030800.1:CDS:1;Parent=LTnewLM_290030800.1 ### LTnewLM_29 . polypeptide 1017395 1018357 . - . ID=LTnewLM_290030800.1:pep;Derives_from=LTnewLM_290030800.1;orthologous_to=LmjF.29.2260_mRNA;ortholog_cluster=OG0003912;product=term%3DDNA replication complex GINS protein SLD5 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16922 LTnewLM_29 Pfam protein_match 1017401 1017565 . - . Parent=LTnewLM_290030800.1:pep;Name=PF16922;signature_desc=DNA replication complex GINS protein SLD5 C-terminus ### LTnewLM_29 AUGUSTUS gene 1021256 1022230 1 - . ID=LTnewLM_290030900 LTnewLM_29 AUGUSTUS mRNA 1021256 1022230 1 - . ID=LTnewLM_290030900.1;Parent=LTnewLM_290030900 LTnewLM_29 AUGUSTUS CDS 1021256 1022230 1 - 0 ID=LTnewLM_290030900.1:CDS:1;Parent=LTnewLM_290030900.1 ### LTnewLM_29 . polypeptide 1021256 1022230 . - . ID=LTnewLM_290030900.1:pep;Derives_from=LTnewLM_290030900.1;orthologous_to=LmjF.29.2270_mRNA;ortholog_cluster=OG0003913;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_29 Pfam protein_match 1021556 1021906 . - . Parent=LTnewLM_290030900.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_29 AUGUSTUS gene 1023869 1024792 1 - . ID=LTnewLM_290031000 LTnewLM_29 AUGUSTUS mRNA 1023869 1024792 1 - . ID=LTnewLM_290031000.1;Parent=LTnewLM_290031000 LTnewLM_29 AUGUSTUS CDS 1023869 1024792 1 - 0 ID=LTnewLM_290031000.1:CDS:1;Parent=LTnewLM_290031000.1 ### LTnewLM_29 . polypeptide 1023869 1024792 . - . ID=LTnewLM_290031000.1:pep;Derives_from=LTnewLM_290031000.1;orthologous_to=LmjF.29.2280_mRNA;ortholog_cluster=OG0003914;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_29 Pfam protein_match 1024118 1024459 . - . Parent=LTnewLM_290031000.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_29 AUGUSTUS gene 1034206 1035444 1 - . ID=LTnewLM_290031100 LTnewLM_29 AUGUSTUS mRNA 1034206 1035444 1 - . ID=LTnewLM_290031100.1;Parent=LTnewLM_290031100 LTnewLM_29 AUGUSTUS CDS 1034206 1035444 1 - 0 ID=LTnewLM_290031100.1:CDS:1;Parent=LTnewLM_290031100.1 ### LTnewLM_29 . polypeptide 1034206 1035444 . - . ID=LTnewLM_290031100.1:pep;Derives_from=LTnewLM_290031100.1;orthologous_to=LmjF.29.2290_mRNA;ortholog_cluster=OG0003915;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1040105 1042351 1 - . ID=LTnewLM_290031200 LTnewLM_29 AUGUSTUS mRNA 1040105 1042351 1 - . ID=LTnewLM_290031200.1;Parent=LTnewLM_290031200 LTnewLM_29 AUGUSTUS CDS 1040105 1042351 1 - 0 ID=LTnewLM_290031200.1:CDS:1;Parent=LTnewLM_290031200.1 ### LTnewLM_29 . polypeptide 1040105 1042351 . - . ID=LTnewLM_290031200.1:pep;Derives_from=LTnewLM_290031200.1;orthologous_to=LmjF.29.2300_mRNA;ortholog_cluster=OG0003916;product=term%3DVariant UBP zinc finger/Zn-finger in ubiquitin-hydrolases and other protein/Ubiquitin carboxyl-terminal hydrolase/UBA/TS-N domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17807|Pfam:PF02148|Pfam:PF00443|Pfam:PF13423|Pfam:PF00627;Ontology_term=GO:0005515,GO:0036459,GO:0008270,GO:0006511 LTnewLM_29 Pfam protein_match 1040153 1041445 . - . Parent=LTnewLM_290031200.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_29 Pfam protein_match 1040171 1041121 . - . Parent=LTnewLM_290031200.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase LTnewLM_29 Pfam protein_match 1040426 1040512 . - . Parent=LTnewLM_290031200.1:pep;Name=PF00627;signature_desc=UBA/TS-N domain;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 1041611 1041811 . - . Parent=LTnewLM_290031200.1:pep;Name=PF02148;signature_desc=Zn-finger in ubiquitin-hydrolases and other protein;Ontology_term=GO:0008270 LTnewLM_29 Pfam protein_match 1042118 1042291 . - . Parent=LTnewLM_290031200.1:pep;Name=PF17807;signature_desc=Variant UBP zinc finger ### LTnewLM_29 AUGUSTUS gene 1045247 1046050 1 - . ID=LTnewLM_290031300 LTnewLM_29 AUGUSTUS mRNA 1045247 1046050 1 - . ID=LTnewLM_290031300.1;Parent=LTnewLM_290031300 LTnewLM_29 AUGUSTUS CDS 1045247 1046050 1 - 0 ID=LTnewLM_290031300.1:CDS:1;Parent=LTnewLM_290031300.1 ### LTnewLM_29 . polypeptide 1045247 1046050 . - . ID=LTnewLM_290031300.1:pep;Derives_from=LTnewLM_290031300.1;orthologous_to=LmjF.29.2310_mRNA;ortholog_cluster=OG0003917;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_29 Pfam protein_match 1045256 1045981 . - . Parent=LTnewLM_290031300.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_29 Pfam protein_match 1045469 1045975 . - . Parent=LTnewLM_290031300.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_29 AUGUSTUS gene 1048532 1049650 1 - . ID=LTnewLM_290031400 LTnewLM_29 AUGUSTUS mRNA 1048532 1049650 1 - . ID=LTnewLM_290031400.1;Parent=LTnewLM_290031400 LTnewLM_29 AUGUSTUS CDS 1048532 1049650 1 - 0 ID=LTnewLM_290031400.1:CDS:1;Parent=LTnewLM_290031400.1 ### LTnewLM_29 . polypeptide 1048532 1049650 . - . ID=LTnewLM_290031400.1:pep;Derives_from=LTnewLM_290031400.1;orthologous_to=LmjF.29.2320_mRNA;ortholog_cluster=OG0003918;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 1048697 1049464 . - . Parent=LTnewLM_290031400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 1048709 1049455 . - . Parent=LTnewLM_290031400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 1050237 1051477 0.52 - . ID=LTnewLM_290031500 LTnewLM_29 AUGUSTUS mRNA 1050237 1051477 0.52 - . ID=LTnewLM_290031500.1;Parent=LTnewLM_290031500 LTnewLM_29 AUGUSTUS CDS 1050237 1050361 0.99 - 2 ID=LTnewLM_290031500.1:CDS:1;Parent=LTnewLM_290031500.1 LTnewLM_29 AUGUSTUS CDS 1050499 1051477 0.53 - 0 ID=LTnewLM_290031500.1:CDS:2;Parent=LTnewLM_290031500.1 ### LTnewLM_29 . polypeptide 1050237 1051477 . - . ID=LTnewLM_290031500.1:pep;Derives_from=LTnewLM_290031500.1;orthologous_to=LmjF.29.2330_mRNA;ortholog_cluster=OG0003919;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1051745 1052299 1 - . ID=LTnewLM_290031600 LTnewLM_29 AUGUSTUS mRNA 1051745 1052299 1 - . ID=LTnewLM_290031600.1;Parent=LTnewLM_290031600 LTnewLM_29 AUGUSTUS CDS 1051745 1052299 1 - 0 ID=LTnewLM_290031600.1:CDS:1;Parent=LTnewLM_290031600.1 ### LTnewLM_29 . polypeptide 1051745 1052299 . - . ID=LTnewLM_290031600.1:pep;Derives_from=LTnewLM_290031600.1;orthologous_to=LmjF.29.2340_mRNA;ortholog_cluster=OG0003920;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1052696 1053316 1 - . ID=LTnewLM_290031700 LTnewLM_29 AUGUSTUS mRNA 1052696 1053316 1 - . ID=LTnewLM_290031700.1;Parent=LTnewLM_290031700 LTnewLM_29 AUGUSTUS CDS 1052696 1053316 1 - 0 ID=LTnewLM_290031700.1:CDS:1;Parent=LTnewLM_290031700.1 ### LTnewLM_29 . polypeptide 1052696 1053316 . - . ID=LTnewLM_290031700.1:pep;Derives_from=LTnewLM_290031700.1;orthologous_to=LmjF.29.2350_mRNA;ortholog_cluster=OG0003921;product=term%3DUbiquinone biosynthesis protein COQ7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03232;Ontology_term=GO:0055114,GO:0006744 LTnewLM_29 Pfam protein_match 1052711 1053247 . - . Parent=LTnewLM_290031700.1:pep;Name=PF03232;signature_desc=Ubiquinone biosynthesis protein COQ7;Ontology_term=GO:0006744,GO:0055114 ### LTnewLM_29 AUGUSTUS gene 1054862 1056223 1 + . ID=LTnewLM_290031800 LTnewLM_29 AUGUSTUS mRNA 1054862 1056223 1 + . ID=LTnewLM_290031800.1;Parent=LTnewLM_290031800 LTnewLM_29 AUGUSTUS CDS 1054862 1056223 1 + 0 ID=LTnewLM_290031800.1:CDS:1;Parent=LTnewLM_290031800.1 ### LTnewLM_29 . polypeptide 1054862 1056223 . + . ID=LTnewLM_290031800.1:pep;Derives_from=LTnewLM_290031800.1;orthologous_to=LmjF.29.2360_mRNA;ortholog_cluster=OG0003922;product=term%3DAminopeptidase I zinc metalloprotease (M18)/M42 glutamyl aminopeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02127|Pfam:PF05343;Ontology_term=GO:0006508,GO:0008270,GO:0004177 LTnewLM_29 Pfam protein_match 1054916 1056193 . + . Parent=LTnewLM_290031800.1:pep;Name=PF02127;signature_desc=Aminopeptidase I zinc metalloprotease (M18);Ontology_term=GO:0004177,GO:0008270,GO:0006508 LTnewLM_29 Pfam protein_match 1055591 1056175 . + . Parent=LTnewLM_290031800.1:pep;Name=PF05343;signature_desc=M42 glutamyl aminopeptidase ### LTnewLM_29 Liftoff gene 1057153 1057308 . + . ID=LTnewLM_290031900;coverage=1.0;sequence_ID=0.967;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.2370_0 LTnewLM_29 Liftoff mRNA 1057153 1057308 . + . ID=LTnewLM_290031900.1;Parent=LTnewLM_290031900;matches_ref_protein=True;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 1057153 1057308 . + 0 ID=LTnewLM_290031900.1:CDS:1;Parent=LTnewLM_290031900.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 1057153 1057308 . + . ID=LTnewLM_290031900.1:pep;Derives_from=LTnewLM_290031900.1;orthologous_to=LTnewLM_160018000.1,LmjF.16.1170_mRNA,LmjF.29.2370_mRNA;ortholog_cluster=OG0000131;product=term%3DRibosomal L39 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00832;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_29 Pfam protein_match 1057177 1057299 . + . Parent=LTnewLM_290031900.1:pep;Name=PF00832;signature_desc=Ribosomal L39 protein;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 1057796 1059568 1 + . ID=LTnewLM_290032000 LTnewLM_29 AUGUSTUS mRNA 1057796 1059568 1 + . ID=LTnewLM_290032000.1;Parent=LTnewLM_290032000 LTnewLM_29 AUGUSTUS CDS 1057796 1059568 1 + 0 ID=LTnewLM_290032000.1:CDS:1;Parent=LTnewLM_290032000.1 ### LTnewLM_29 . polypeptide 1057796 1059568 . + . ID=LTnewLM_290032000.1:pep;Derives_from=LTnewLM_290032000.1;orthologous_to=LmjF.29.2380_mRNA;ortholog_cluster=OG0003923;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_29 Pfam protein_match 1057898 1058815 . + . Parent=LTnewLM_290032000.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_29 Pfam protein_match 1057910 1058251 . + . Parent=LTnewLM_290032000.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_29 AUGUSTUS gene 1061293 1063062 1 + . ID=LTnewLM_290032100 LTnewLM_29 AUGUSTUS mRNA 1061293 1063062 1 + . ID=LTnewLM_290032100.1;Parent=LTnewLM_290032100 LTnewLM_29 AUGUSTUS CDS 1061293 1063062 1 + 0 ID=LTnewLM_290032100.1:CDS:1;Parent=LTnewLM_290032100.1 ### LTnewLM_29 . polypeptide 1061293 1063062 . + . ID=LTnewLM_290032100.1:pep;Derives_from=LTnewLM_290032100.1;orthologous_to=LmjF.29.2390_mRNA;ortholog_cluster=OG0003924;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_29 Pfam protein_match 1061302 1061742 . + . Parent=LTnewLM_290032100.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_29 Pfam protein_match 1061386 1062306 . + . Parent=LTnewLM_290032100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_29 AUGUSTUS gene 1067851 1069050 1 + . ID=LTnewLM_290032200 LTnewLM_29 AUGUSTUS mRNA 1067851 1069050 1 + . ID=LTnewLM_290032200.1;Parent=LTnewLM_290032200 LTnewLM_29 AUGUSTUS CDS 1067851 1069050 1 + 0 ID=LTnewLM_290032200.1:CDS:1;Parent=LTnewLM_290032200.1 ### LTnewLM_29 . polypeptide 1067851 1069050 . + . ID=LTnewLM_290032200.1:pep;Derives_from=LTnewLM_290032200.1;orthologous_to=LmjF.29.2400_mRNA;ortholog_cluster=OG0003925;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_29 Pfam protein_match 1068511 1068921 . + . Parent=LTnewLM_290032200.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_29 AUGUSTUS gene 1071387 1072634 1 + . ID=LTnewLM_290032300 LTnewLM_29 AUGUSTUS mRNA 1071387 1072634 1 + . ID=LTnewLM_290032300.1;Parent=LTnewLM_290032300 LTnewLM_29 AUGUSTUS CDS 1071387 1072634 1 + 0 ID=LTnewLM_290032300.1:CDS:1;Parent=LTnewLM_290032300.1 ### LTnewLM_29 . polypeptide 1071387 1072634 . + . ID=LTnewLM_290032300.1:pep;Derives_from=LTnewLM_290032300.1;orthologous_to=LmjF.29.2410_mRNA;ortholog_cluster=OG0003926;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_29 Pfam protein_match 1072011 1072328 . + . Parent=LTnewLM_290032300.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_29 AUGUSTUS gene 1074577 1076745 1 + . ID=LTnewLM_290032400 LTnewLM_29 AUGUSTUS mRNA 1074577 1076745 1 + . ID=LTnewLM_290032400.1;Parent=LTnewLM_290032400 LTnewLM_29 AUGUSTUS CDS 1074577 1076745 1 + 0 ID=LTnewLM_290032400.1:CDS:1;Parent=LTnewLM_290032400.1 ### LTnewLM_29 . polypeptide 1074577 1076745 . + . ID=LTnewLM_290032400.1:pep;Derives_from=LTnewLM_290032400.1;orthologous_to=LmjF.29.2420_mRNA;ortholog_cluster=OG0003927;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1077986 1080352 1 + . ID=LTnewLM_290032500 LTnewLM_29 AUGUSTUS mRNA 1077986 1080352 1 + . ID=LTnewLM_290032500.1;Parent=LTnewLM_290032500 LTnewLM_29 AUGUSTUS CDS 1077986 1080352 1 + 0 ID=LTnewLM_290032500.1:CDS:1;Parent=LTnewLM_290032500.1 ### LTnewLM_29 . polypeptide 1077986 1080352 . + . ID=LTnewLM_290032500.1:pep;Derives_from=LTnewLM_290032500.1;orthologous_to=LmjF.29.2430_mRNA;ortholog_cluster=OG0003928;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1081750 1083924 1 + . ID=LTnewLM_290032600 LTnewLM_29 AUGUSTUS mRNA 1081750 1083924 1 + . ID=LTnewLM_290032600.1;Parent=LTnewLM_290032600 LTnewLM_29 AUGUSTUS CDS 1081750 1083924 1 + 0 ID=LTnewLM_290032600.1:CDS:1;Parent=LTnewLM_290032600.1 ### LTnewLM_29 . polypeptide 1081750 1083924 . + . ID=LTnewLM_290032600.1:pep;Derives_from=LTnewLM_290032600.1;orthologous_to=LmjF.29.2440_mRNA;ortholog_cluster=OG0003929;product=term%3D3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00233;Ontology_term=GO:0007165,GO:0004114 LTnewLM_29 Pfam protein_match 1083130 1083834 . + . Parent=LTnewLM_290032600.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 ### LTnewLM_29 AUGUSTUS gene 1089049 1089516 1 + . ID=LTnewLM_290032700 LTnewLM_29 AUGUSTUS mRNA 1089049 1089516 1 + . ID=LTnewLM_290032700.1;Parent=LTnewLM_290032700 LTnewLM_29 AUGUSTUS CDS 1089049 1089516 1 + 0 ID=LTnewLM_290032700.1:CDS:1;Parent=LTnewLM_290032700.1 ### LTnewLM_29 . polypeptide 1089049 1089516 . + . ID=LTnewLM_290032700.1:pep;Derives_from=LTnewLM_290032700.1;orthologous_to=LmjF.29.2450_mRNA;ortholog_cluster=OG0003930;product=term%3DHsp20/alpha crystallin family/HSP20-like domain found in ArsA%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00011|Pfam:PF17886 LTnewLM_29 Pfam protein_match 1089199 1089507 . + . Parent=LTnewLM_290032700.1:pep;Name=PF00011;signature_desc=Hsp20/alpha crystallin family LTnewLM_29 Pfam protein_match 1089214 1089456 . + . Parent=LTnewLM_290032700.1:pep;Name=PF17886;signature_desc=HSP20-like domain found in ArsA ### LTnewLM_29 AUGUSTUS gene 1092286 1092948 1 + . ID=LTnewLM_290032800 LTnewLM_29 AUGUSTUS mRNA 1092286 1092948 1 + . ID=LTnewLM_290032800.1;Parent=LTnewLM_290032800 LTnewLM_29 AUGUSTUS CDS 1092286 1092948 1 + 0 ID=LTnewLM_290032800.1:CDS:1;Parent=LTnewLM_290032800.1 ### LTnewLM_29 . polypeptide 1092286 1092948 . + . ID=LTnewLM_290032800.1:pep;Derives_from=LTnewLM_290032800.1;orthologous_to=LTnewLM_290032900.1,LmjF.29.2470_mRNA;ortholog_cluster=OG0000425;product=term%3DRibosomal protein L13e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01294;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_29 Pfam protein_match 1092307 1092864 . + . Parent=LTnewLM_290032800.1:pep;Name=PF01294;signature_desc=Ribosomal protein L13e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 1094324 1094986 1 + . ID=LTnewLM_290032900 LTnewLM_29 AUGUSTUS mRNA 1094324 1094986 1 + . ID=LTnewLM_290032900.1;Parent=LTnewLM_290032900 LTnewLM_29 AUGUSTUS CDS 1094324 1094986 1 + 0 ID=LTnewLM_290032900.1:CDS:1;Parent=LTnewLM_290032900.1 ### LTnewLM_29 . polypeptide 1094324 1094986 . + . ID=LTnewLM_290032900.1:pep;Derives_from=LTnewLM_290032900.1;orthologous_to=LTnewLM_290032800.1,LmjF.29.2470_mRNA;ortholog_cluster=OG0000425;product=term%3DRibosomal protein L13e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01294;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_29 Pfam protein_match 1094345 1094902 . + . Parent=LTnewLM_290032900.1:pep;Name=PF01294;signature_desc=Ribosomal protein L13e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 1096397 1098925 1 + . ID=LTnewLM_290033000 LTnewLM_29 AUGUSTUS mRNA 1096397 1098925 1 + . ID=LTnewLM_290033000.1;Parent=LTnewLM_290033000 LTnewLM_29 AUGUSTUS CDS 1096397 1098925 1 + 0 ID=LTnewLM_290033000.1:CDS:1;Parent=LTnewLM_290033000.1 ### LTnewLM_29 . polypeptide 1096397 1098925 . + . ID=LTnewLM_290033000.1:pep;Derives_from=LTnewLM_290033000.1;orthologous_to=LmjF.29.2480_mRNA;ortholog_cluster=OG0003931;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 1100646 1102001 2.49e+03 + . ID=LTnewLM_290033100:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.29.2490:mRNA 1 452;original_prot_length=452 LTnewLM_29 . pseudogenic_transcript 1100646 1102001 . + . ID=LTnewLM_290033100.1;Parent=LTnewLM_290033100:pseudogene LTnewLM_29 . pseudogenic_exon 1100646 1102001 . + . ID=LTnewLM_290033100.1:pseudogenic_exon:1;Parent=LTnewLM_290033100.1 ### LTnewLM_29 . polypeptide 1100646 1102001 . + . ID=LTnewLM_290033100.1:pep;Derives_from=LTnewLM_290033100.1;orthologous_to=LmjF.29.2490_mRNA;ortholog_cluster=OG0007584;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 1101159 1101938 . + . Parent=LTnewLM_290033100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 1101159 1101944 . + . Parent=LTnewLM_290033100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 1103833 1105170 1 + . ID=LTnewLM_290033200 LTnewLM_29 AUGUSTUS mRNA 1103833 1105170 1 + . ID=LTnewLM_290033200.1;Parent=LTnewLM_290033200 LTnewLM_29 AUGUSTUS CDS 1103833 1105170 1 + 0 ID=LTnewLM_290033200.1:CDS:1;Parent=LTnewLM_290033200.1 ### LTnewLM_29 . polypeptide 1103833 1105170 . + . ID=LTnewLM_290033200.1:pep;Derives_from=LTnewLM_290033200.1;orthologous_to=LmjF.29.2500_mRNA;ortholog_cluster=OG0003932;product=term%3DMIT (microtubule interacting and transport) domain/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Vps4 C terminal oligomerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04212|Pfam:PF00004|Pfam:PF17862|Pfam:PF09336;Ontology_term=GO:0005524 LTnewLM_29 Pfam protein_match 1103851 1104045 . + . Parent=LTnewLM_290033200.1:pep;Name=PF04212;signature_desc=MIT (microtubule interacting and transport) domain LTnewLM_29 Pfam protein_match 1104328 1104729 . + . Parent=LTnewLM_290033200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_29 Pfam protein_match 1104799 1104891 . + . Parent=LTnewLM_290033200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_29 Pfam protein_match 1104973 1105155 . + . Parent=LTnewLM_290033200.1:pep;Name=PF09336;signature_desc=Vps4 C terminal oligomerisation domain ### LTnewLM_29 AUGUSTUS gene 1107951 1109411 1 + . ID=LTnewLM_290033300 LTnewLM_29 AUGUSTUS mRNA 1107951 1109411 1 + . ID=LTnewLM_290033300.1;Parent=LTnewLM_290033300 LTnewLM_29 AUGUSTUS CDS 1107951 1109411 1 + 0 ID=LTnewLM_290033300.1:CDS:1;Parent=LTnewLM_290033300.1 ### LTnewLM_29 . polypeptide 1107951 1109411 . + . ID=LTnewLM_290033300.1:pep;Derives_from=LTnewLM_290033300.1;orthologous_to=LmjF.29.2510_mRNA;ortholog_cluster=OG0003933;product=term%3DPhosphofructokinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00365;Ontology_term=GO:0006096,GO:0003872 LTnewLM_29 Pfam protein_match 1108242 1109153 . + . Parent=LTnewLM_290033300.1:pep;Name=PF00365;signature_desc=Phosphofructokinase;Ontology_term=GO:0003872,GO:0006096 ### LTnewLM_29 AUGUSTUS gene 1113375 1114583 1 + . ID=LTnewLM_290033400 LTnewLM_29 AUGUSTUS mRNA 1113375 1114583 1 + . ID=LTnewLM_290033400.1;Parent=LTnewLM_290033400 LTnewLM_29 AUGUSTUS CDS 1113375 1114583 1 + 0 ID=LTnewLM_290033400.1:CDS:1;Parent=LTnewLM_290033400.1 ### LTnewLM_29 . polypeptide 1113375 1114583 . + . ID=LTnewLM_290033400.1:pep;Derives_from=LTnewLM_290033400.1;orthologous_to=LmjF.29.2520_mRNA;ortholog_cluster=OG0003934;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1115806 1116009 1 + . ID=LTnewLM_290033500 LTnewLM_29 AUGUSTUS mRNA 1115806 1116009 1 + . ID=LTnewLM_290033500.1;Parent=LTnewLM_290033500 LTnewLM_29 AUGUSTUS CDS 1115806 1116009 1 + 0 ID=LTnewLM_290033500.1:CDS:1;Parent=LTnewLM_290033500.1 ### LTnewLM_29 . polypeptide 1115806 1116009 . + . ID=LTnewLM_290033500.1:pep;Derives_from=LTnewLM_290033500.1;orthologous_to=LmjF.29.2530_mRNA;ortholog_cluster=OG0003935;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1117094 1117540 0.61 + . ID=LTnewLM_290033600 LTnewLM_29 AUGUSTUS mRNA 1117094 1117540 0.61 + . ID=LTnewLM_290033600.1;Parent=LTnewLM_290033600 LTnewLM_29 AUGUSTUS CDS 1117094 1117376 0.77 + 0 ID=LTnewLM_290033600.1:CDS:1;Parent=LTnewLM_290033600.1 LTnewLM_29 AUGUSTUS CDS 1117467 1117540 0.63 + 2 ID=LTnewLM_290033600.1:CDS:2;Parent=LTnewLM_290033600.1 ### LTnewLM_29 . polypeptide 1117094 1117540 . + . ID=LTnewLM_290033600.1:pep;Derives_from=LTnewLM_290033600.1;product=term%3Dhypothetical protein ### LTnewLM_29 . pseudogene 1118653 1120569 . + . ID=LTnewLM_290033700:pseudogene;coverage=1.0;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2540_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 1118653 1120569 . + . ID=LTnewLM_290033700.1;Parent=LTnewLM_290033700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 1118653 1120569 . + . ID=LTnewLM_290033700.1:pseudogenic_exon:1;Parent=LTnewLM_290033700.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 1118653 1120569 . + . ID=LTnewLM_290033700.1:pep;Derives_from=LTnewLM_290033700.1;orthologous_to=LmjF.29.2540_mRNA;ortholog_cluster=OG0007585;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_29 Pfam protein_match 1119085 1119849 . + . Parent=LTnewLM_290033700.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_29 AUGUSTUS gene 1123139 1125760 1 + . ID=LTnewLM_290033800 LTnewLM_29 AUGUSTUS mRNA 1123139 1125760 1 + . ID=LTnewLM_290033800.1;Parent=LTnewLM_290033800 LTnewLM_29 AUGUSTUS CDS 1123139 1125760 1 + 0 ID=LTnewLM_290033800.1:CDS:1;Parent=LTnewLM_290033800.1 ### LTnewLM_29 . polypeptide 1123139 1125760 . + . ID=LTnewLM_290033800.1:pep;Derives_from=LTnewLM_290033800.1;orthologous_to=LmjF.29.2550_mRNA;ortholog_cluster=OG0003936;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF14559 LTnewLM_29 Pfam protein_match 1123940 1124119 . + . Parent=LTnewLM_290033800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_29 Pfam protein_match 1123952 1124149 . + . Parent=LTnewLM_290033800.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat ### LTnewLM_29 AUGUSTUS gene 1126968 1127990 1 + . ID=LTnewLM_290033900 LTnewLM_29 AUGUSTUS mRNA 1126968 1127990 1 + . ID=LTnewLM_290033900.1;Parent=LTnewLM_290033900 LTnewLM_29 AUGUSTUS CDS 1126968 1127990 1 + 0 ID=LTnewLM_290033900.1:CDS:1;Parent=LTnewLM_290033900.1 ### LTnewLM_29 . polypeptide 1126968 1127990 . + . ID=LTnewLM_290033900.1:pep;Derives_from=LTnewLM_290033900.1;orthologous_to=LmjF.29.2560_mRNA;ortholog_cluster=OG0003937;product=term%3DDomain of unknown function (DUF4586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15239 LTnewLM_29 Pfam protein_match 1126977 1127972 . + . Parent=LTnewLM_290033900.1:pep;Name=PF15239;signature_desc=Domain of unknown function (DUF4586) ### LTnewLM_29 AUGUSTUS gene 1129961 1131466 1 + . ID=LTnewLM_290034000 LTnewLM_29 AUGUSTUS mRNA 1129961 1131466 1 + . ID=LTnewLM_290034000.1;Parent=LTnewLM_290034000 LTnewLM_29 AUGUSTUS CDS 1129961 1131466 1 + 0 ID=LTnewLM_290034000.1:CDS:1;Parent=LTnewLM_290034000.1 ### LTnewLM_29 . polypeptide 1129961 1131466 . + . ID=LTnewLM_290034000.1:pep;Derives_from=LTnewLM_290034000.1;orthologous_to=LmjF.29.2570_mRNA;ortholog_cluster=OG0003938;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 1130018 1130791 . + . Parent=LTnewLM_290034000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 1130027 1130779 . + . Parent=LTnewLM_290034000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_29 Pfam protein_match 1130348 1130740 . + . Parent=LTnewLM_290034000.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_29 AUGUSTUS gene 1134617 1136371 1 + . ID=LTnewLM_290034100 LTnewLM_29 AUGUSTUS mRNA 1134617 1136371 1 + . ID=LTnewLM_290034100.1;Parent=LTnewLM_290034100 LTnewLM_29 AUGUSTUS CDS 1134617 1136371 1 + 0 ID=LTnewLM_290034100.1:CDS:1;Parent=LTnewLM_290034100.1 ### LTnewLM_29 . polypeptide 1134617 1136371 . + . ID=LTnewLM_290034100.1:pep;Derives_from=LTnewLM_290034100.1;orthologous_to=LmjF.29.2580_mRNA;ortholog_cluster=OG0003939;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1138398 1140485 1 + . ID=LTnewLM_290034200 LTnewLM_29 AUGUSTUS mRNA 1138398 1140485 1 + . ID=LTnewLM_290034200.1;Parent=LTnewLM_290034200 LTnewLM_29 AUGUSTUS CDS 1138398 1140485 1 + 0 ID=LTnewLM_290034200.1:CDS:1;Parent=LTnewLM_290034200.1 ### LTnewLM_29 . polypeptide 1138398 1140485 . + . ID=LTnewLM_290034200.1:pep;Derives_from=LTnewLM_290034200.1;orthologous_to=LmjF.29.2590_mRNA;ortholog_cluster=OG0003940;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1141598 1143919 1 + . ID=LTnewLM_290034300 LTnewLM_29 AUGUSTUS mRNA 1141598 1143919 1 + . ID=LTnewLM_290034300.1;Parent=LTnewLM_290034300 LTnewLM_29 AUGUSTUS CDS 1141598 1141860 1 + 0 ID=LTnewLM_290034300.1:CDS:1;Parent=LTnewLM_290034300.1 LTnewLM_29 AUGUSTUS CDS 1142680 1143919 1 + 1 ID=LTnewLM_290034300.1:CDS:2;Parent=LTnewLM_290034300.1 ### LTnewLM_29 . polypeptide 1141598 1143919 . + . ID=LTnewLM_290034300.1:pep;Derives_from=LTnewLM_290034300.1;orthologous_to=LmjF.29.2600_mRNA;ortholog_cluster=OG0003941;product=term%3DPoly(A) polymerase central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04928;Ontology_term=GO:0043631,GO:0004652 LTnewLM_29 Pfam protein_match 1141712 1142587 . + . Parent=LTnewLM_290034300.1:pep;Name=PF04928;signature_desc=Poly(A) polymerase central domain;Ontology_term=GO:0004652,GO:0043631 ### LTnewLM_29 AUGUSTUS gene 1144577 1146736 1 + . ID=LTnewLM_290034400 LTnewLM_29 AUGUSTUS mRNA 1144577 1146736 1 + . ID=LTnewLM_290034400.1;Parent=LTnewLM_290034400 LTnewLM_29 AUGUSTUS CDS 1144577 1146736 1 + 0 ID=LTnewLM_290034400.1:CDS:1;Parent=LTnewLM_290034400.1 ### LTnewLM_29 . polypeptide 1144577 1146736 . + . ID=LTnewLM_290034400.1:pep;Derives_from=LTnewLM_290034400.1;orthologous_to=LmjF.29.2610_mRNA;ortholog_cluster=OG0003942;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1147257 1147625 1 + . ID=LTnewLM_290034500 LTnewLM_29 AUGUSTUS mRNA 1147257 1147625 1 + . ID=LTnewLM_290034500.1;Parent=LTnewLM_290034500 LTnewLM_29 AUGUSTUS CDS 1147257 1147625 1 + 0 ID=LTnewLM_290034500.1:CDS:1;Parent=LTnewLM_290034500.1 ### LTnewLM_29 . polypeptide 1147257 1147625 . + . ID=LTnewLM_290034500.1:pep;Derives_from=LTnewLM_290034500.1;orthologous_to=LmjF.29.2620_mRNA;ortholog_cluster=OG0003943;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1150877 1154590 1 + . ID=LTnewLM_290034600 LTnewLM_29 AUGUSTUS mRNA 1150877 1154590 1 + . ID=LTnewLM_290034600.1;Parent=LTnewLM_290034600 LTnewLM_29 AUGUSTUS CDS 1150877 1154590 1 + 0 ID=LTnewLM_290034600.1:CDS:1;Parent=LTnewLM_290034600.1 ### LTnewLM_29 . polypeptide 1150877 1154590 . + . ID=LTnewLM_290034600.1:pep;Derives_from=LTnewLM_290034600.1;orthologous_to=LmjF.29.2630_mRNA;ortholog_cluster=OG0003944;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1156436 1157761 1 + . ID=LTnewLM_290034700 LTnewLM_29 AUGUSTUS mRNA 1156436 1157761 1 + . ID=LTnewLM_290034700.1;Parent=LTnewLM_290034700 LTnewLM_29 AUGUSTUS CDS 1156436 1157761 1 + 0 ID=LTnewLM_290034700.1:CDS:1;Parent=LTnewLM_290034700.1 ### LTnewLM_29 . polypeptide 1156436 1157761 . + . ID=LTnewLM_290034700.1:pep;Derives_from=LTnewLM_290034700.1;orthologous_to=LmjF.29.2640_mRNA;ortholog_cluster=OG0003945;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1158848 1161970 1 + . ID=LTnewLM_290034800 LTnewLM_29 AUGUSTUS mRNA 1158848 1161970 1 + . ID=LTnewLM_290034800.1;Parent=LTnewLM_290034800 LTnewLM_29 AUGUSTUS CDS 1158848 1161970 1 + 0 ID=LTnewLM_290034800.1:CDS:1;Parent=LTnewLM_290034800.1 ### LTnewLM_29 . polypeptide 1158848 1161970 . + . ID=LTnewLM_290034800.1:pep;Derives_from=LTnewLM_290034800.1;orthologous_to=LmjF.29.2650_mRNA;ortholog_cluster=OG0003946;product=term%3DNuclear condensing complex subunits%2C C-term domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12719 LTnewLM_29 Pfam protein_match 1160513 1161508 . + . Parent=LTnewLM_290034800.1:pep;Name=PF12719;signature_desc=Nuclear condensing complex subunits%2C C-term domain ### LTnewLM_29 AUGUSTUS gene 1163176 1166037 1 + . ID=LTnewLM_290034900 LTnewLM_29 AUGUSTUS mRNA 1163176 1166037 1 + . ID=LTnewLM_290034900.1;Parent=LTnewLM_290034900 LTnewLM_29 AUGUSTUS CDS 1163176 1166037 1 + 0 ID=LTnewLM_290034900.1:CDS:1;Parent=LTnewLM_290034900.1 ### LTnewLM_29 . polypeptide 1163176 1166037 . + . ID=LTnewLM_290034900.1:pep;Derives_from=LTnewLM_290034900.1;orthologous_to=LmjF.29.2660_mRNA;ortholog_cluster=OG0003947;product=term%3DDEAD_2/Helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06733|Pfam:PF13307;Ontology_term=GO:0006139,GO:0016818,GO:0005524,GO:0008026,GO:0004003,GO:0003676,GO:0003677 LTnewLM_29 Pfam protein_match 1163443 1163916 . + . Parent=LTnewLM_290034900.1:pep;Name=PF06733;signature_desc=DEAD_2;Ontology_term=GO:0003677,GO:0004003,GO:0005524 LTnewLM_29 Pfam protein_match 1164697 1165239 . + . Parent=LTnewLM_290034900.1:pep;Name=PF13307;signature_desc=Helicase C-terminal domain;Ontology_term=GO:0003676,GO:0005524,GO:0008026,GO:0016818,GO:0006139 ### LTnewLM_29 AUGUSTUS gene 1167230 1168798 1 + . ID=LTnewLM_290035000 LTnewLM_29 AUGUSTUS mRNA 1167230 1168798 1 + . ID=LTnewLM_290035000.1;Parent=LTnewLM_290035000 LTnewLM_29 AUGUSTUS CDS 1167230 1168798 1 + 0 ID=LTnewLM_290035000.1:CDS:1;Parent=LTnewLM_290035000.1 ### LTnewLM_29 . polypeptide 1167230 1168798 . + . ID=LTnewLM_290035000.1:pep;Derives_from=LTnewLM_290035000.1;orthologous_to=LmjF.29.2670_mRNA;ortholog_cluster=OG0003948;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_29 Pfam protein_match 1167272 1168033 . + . Parent=LTnewLM_290035000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 1167281 1168030 . + . Parent=LTnewLM_290035000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_29 AUGUSTUS gene 1171614 1174859 1 + . ID=LTnewLM_290035100 LTnewLM_29 AUGUSTUS mRNA 1171614 1174859 1 + . ID=LTnewLM_290035100.1;Parent=LTnewLM_290035100 LTnewLM_29 AUGUSTUS CDS 1171614 1174859 1 + 0 ID=LTnewLM_290035100.1:CDS:1;Parent=LTnewLM_290035100.1 ### LTnewLM_29 . polypeptide 1171614 1174859 . + . ID=LTnewLM_290035100.1:pep;Derives_from=LTnewLM_290035100.1;orthologous_to=LmjF.29.2680_mRNA;ortholog_cluster=OG0003949;product=term%3DFYVE zinc finger/3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363|Pfam:PF00233;Ontology_term=GO:0007165,GO:0046872,GO:0004114 LTnewLM_29 Pfam protein_match 1171653 1171829 . + . Parent=LTnewLM_290035100.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_29 Pfam protein_match 1173435 1174133 . + . Parent=LTnewLM_290035100.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 ### LTnewLM_29 AUGUSTUS gene 1175774 1176700 1 + . ID=LTnewLM_290035200 LTnewLM_29 AUGUSTUS mRNA 1175774 1176700 1 + . ID=LTnewLM_290035200.1;Parent=LTnewLM_290035200 LTnewLM_29 AUGUSTUS CDS 1175774 1176700 1 + 0 ID=LTnewLM_290035200.1:CDS:1;Parent=LTnewLM_290035200.1 ### LTnewLM_29 . polypeptide 1175774 1176700 . + . ID=LTnewLM_290035200.1:pep;Derives_from=LTnewLM_290035200.1;orthologous_to=LmjF.29.2690_mRNA;ortholog_cluster=OG0003950;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1177689 1180667 1 + . ID=LTnewLM_290035300 LTnewLM_29 AUGUSTUS mRNA 1177689 1180667 1 + . ID=LTnewLM_290035300.1;Parent=LTnewLM_290035300 LTnewLM_29 AUGUSTUS CDS 1177689 1180667 1 + 0 ID=LTnewLM_290035300.1:CDS:1;Parent=LTnewLM_290035300.1 ### LTnewLM_29 . polypeptide 1177689 1180667 . + . ID=LTnewLM_290035300.1:pep;Derives_from=LTnewLM_290035300.1;orthologous_to=LmjF.29.2700_mRNA;ortholog_cluster=OG0003951;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1181395 1182231 1 + . ID=LTnewLM_290035400 LTnewLM_29 AUGUSTUS mRNA 1181395 1182231 1 + . ID=LTnewLM_290035400.1;Parent=LTnewLM_290035400 LTnewLM_29 AUGUSTUS CDS 1181395 1182231 1 + 0 ID=LTnewLM_290035400.1:CDS:1;Parent=LTnewLM_290035400.1 ### LTnewLM_29 . polypeptide 1181395 1182231 . + . ID=LTnewLM_290035400.1:pep;Derives_from=LTnewLM_290035400.1;orthologous_to=LmjF.29.2710_mRNA;ortholog_cluster=OG0003952;product=term%3DRight handed beta helix region/Periplasmic copper-binding protein (NosD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13229|Pfam:PF05048 LTnewLM_29 Pfam protein_match 1181635 1181943 . + . Parent=LTnewLM_290035400.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_29 Pfam protein_match 1181686 1182123 . + . Parent=LTnewLM_290035400.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_29 Pfam protein_match 1181794 1182123 . + . Parent=LTnewLM_290035400.1:pep;Name=PF13229;signature_desc=Right handed beta helix region ### LTnewLM_29 AUGUSTUS gene 1183351 1184322 1 + . ID=LTnewLM_290035500 LTnewLM_29 AUGUSTUS mRNA 1183351 1184322 1 + . ID=LTnewLM_290035500.1;Parent=LTnewLM_290035500 LTnewLM_29 AUGUSTUS CDS 1183351 1184322 1 + 0 ID=LTnewLM_290035500.1:CDS:1;Parent=LTnewLM_290035500.1 ### LTnewLM_29 . polypeptide 1183351 1184322 . + . ID=LTnewLM_290035500.1:pep;Derives_from=LTnewLM_290035500.1;orthologous_to=LmjF.29.2720_mRNA;ortholog_cluster=OG0003953;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_29 Pfam protein_match 1183465 1184190 . + . Parent=LTnewLM_290035500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_29 Pfam protein_match 1183468 1184082 . + . Parent=LTnewLM_290035500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_29 Pfam protein_match 1183687 1183881 . + . Parent=LTnewLM_290035500.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 ### LTnewLM_29 AUGUSTUS gene 1186977 1188077 1 + . ID=LTnewLM_290035600 LTnewLM_29 AUGUSTUS mRNA 1186977 1188077 1 + . ID=LTnewLM_290035600.1;Parent=LTnewLM_290035600 LTnewLM_29 AUGUSTUS CDS 1186977 1188077 1 + 0 ID=LTnewLM_290035600.1:CDS:1;Parent=LTnewLM_290035600.1 ### LTnewLM_29 . polypeptide 1186977 1188077 . + . ID=LTnewLM_290035600.1:pep;Derives_from=LTnewLM_290035600.1;orthologous_to=LmjF.29.2730_mRNA;ortholog_cluster=OG0003954;product=term%3DSTART domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01852;Ontology_term=GO:0008289 LTnewLM_29 Pfam protein_match 1187058 1187591 . + . Parent=LTnewLM_290035600.1:pep;Name=PF01852;signature_desc=START domain;Ontology_term=GO:0008289 ### LTnewLM_29 AUGUSTUS gene 1189220 1190191 1 + . ID=LTnewLM_290035700 LTnewLM_29 AUGUSTUS mRNA 1189220 1190191 1 + . ID=LTnewLM_290035700.1;Parent=LTnewLM_290035700 LTnewLM_29 AUGUSTUS CDS 1189220 1190191 1 + 0 ID=LTnewLM_290035700.1:CDS:1;Parent=LTnewLM_290035700.1 ### LTnewLM_29 . polypeptide 1189220 1190191 . + . ID=LTnewLM_290035700.1:pep;Derives_from=LTnewLM_290035700.1;orthologous_to=LmjF.29.2740_mRNA;ortholog_cluster=OG0003955;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_29 Pfam protein_match 1189334 1189702 . + . Parent=LTnewLM_290035700.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_29 Liftoff gene 1190964 1191185 . + . ID=LTnewLM_290035800;coverage=1.0;sequence_ID=0.954;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.29.2750_0 LTnewLM_29 Liftoff mRNA 1190964 1191185 . + . ID=LTnewLM_290035800.1;Parent=LTnewLM_290035800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_29 Liftoff CDS 1190964 1191185 . + 0 ID=LTnewLM_290035800.1:CDS:1;Parent=LTnewLM_290035800.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 1190964 1191185 . + . ID=LTnewLM_290035800.1:pep;Derives_from=LTnewLM_290035800.1;orthologous_to=LmjF.29.2750_mRNA;ortholog_cluster=OG0003956;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1192088 1193794 1 + . ID=LTnewLM_290035900 LTnewLM_29 AUGUSTUS mRNA 1192088 1193794 1 + . ID=LTnewLM_290035900.1;Parent=LTnewLM_290035900 LTnewLM_29 AUGUSTUS CDS 1192088 1193794 1 + 0 ID=LTnewLM_290035900.1:CDS:1;Parent=LTnewLM_290035900.1 ### LTnewLM_29 . polypeptide 1192088 1193794 . + . ID=LTnewLM_290035900.1:pep;Derives_from=LTnewLM_290035900.1;orthologous_to=LmjF.29.2760_mRNA;ortholog_cluster=OG0003957;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1194771 1195385 1 + . ID=LTnewLM_290036000 LTnewLM_29 AUGUSTUS mRNA 1194771 1195385 1 + . ID=LTnewLM_290036000.1;Parent=LTnewLM_290036000 LTnewLM_29 AUGUSTUS CDS 1194771 1195385 1 + 0 ID=LTnewLM_290036000.1:CDS:1;Parent=LTnewLM_290036000.1 ### LTnewLM_29 . polypeptide 1194771 1195385 . + . ID=LTnewLM_290036000.1:pep;Derives_from=LTnewLM_290036000.1;orthologous_to=LmjF.29.2770_mRNA;ortholog_cluster=OG0003958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1196008 1196883 1 + . ID=LTnewLM_290036100 LTnewLM_29 AUGUSTUS mRNA 1196008 1196883 1 + . ID=LTnewLM_290036100.1;Parent=LTnewLM_290036100 LTnewLM_29 AUGUSTUS CDS 1196008 1196883 1 + 0 ID=LTnewLM_290036100.1:CDS:1;Parent=LTnewLM_290036100.1 ### LTnewLM_29 . polypeptide 1196008 1196883 . + . ID=LTnewLM_290036100.1:pep;Derives_from=LTnewLM_290036100.1;orthologous_to=LmjF.29.2780_mRNA;ortholog_cluster=OG0003959;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_29 Pfam protein_match 1196068 1196313 . + . Parent=LTnewLM_290036100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_29 Pfam protein_match 1196335 1196562 . + . Parent=LTnewLM_290036100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_29 Pfam protein_match 1196617 1196862 . + . Parent=LTnewLM_290036100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_29 . gene 1200113 1200691 . + . ID=LTnewLM_290036200;has_internal_stop=false;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.29.2790:mRNA 1 193;original_prot_length=193 LTnewLM_29 . mRNA 1200113 1200691 . + . ID=LTnewLM_290036200.1;Parent=LTnewLM_290036200 LTnewLM_29 . CDS 1200113 1200691 . + 0 ID=LTnewLM_290036200.1:CDS:1;Parent=LTnewLM_290036200.1 ### LTnewLM_29 . polypeptide 1200113 1200691 . + . ID=LTnewLM_290036200.1:pep;Derives_from=LTnewLM_290036200.1;orthologous_to=LmjF.29.2790_mRNA;ortholog_cluster=OG0003960;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1201661 1202083 0.55 - . ID=LTnewLM_290036300 LTnewLM_29 AUGUSTUS mRNA 1201661 1202083 0.55 - . ID=LTnewLM_290036300.1;Parent=LTnewLM_290036300 LTnewLM_29 AUGUSTUS CDS 1201661 1202083 0.55 - 0 ID=LTnewLM_290036300.1:CDS:1;Parent=LTnewLM_290036300.1 ### LTnewLM_29 . polypeptide 1201661 1202083 . - . ID=LTnewLM_290036300.1:pep;Derives_from=LTnewLM_290036300.1;orthologous_to=LTnewLM_080012100.1,LTnewLM_310010200.1,LTnewLM_310010600.1,LTnewLM_340010700.1,LTnewLM_340033900.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1203784 1204785 1 + . ID=LTnewLM_290036400 LTnewLM_29 AUGUSTUS mRNA 1203784 1204785 1 + . ID=LTnewLM_290036400.1;Parent=LTnewLM_290036400 LTnewLM_29 AUGUSTUS CDS 1203784 1204785 1 + 0 ID=LTnewLM_290036400.1:CDS:1;Parent=LTnewLM_290036400.1 ### LTnewLM_29 . polypeptide 1203784 1204785 . + . ID=LTnewLM_290036400.1:pep;Derives_from=LTnewLM_290036400.1;orthologous_to=LmjF.29.2800_mRNA;ortholog_cluster=OG0003961;product=term%3DInosine-uridine preferring nucleoside hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01156 LTnewLM_29 Pfam protein_match 1203799 1204734 . + . Parent=LTnewLM_290036400.1:pep;Name=PF01156;signature_desc=Inosine-uridine preferring nucleoside hydrolase ### LTnewLM_29 AUGUSTUS gene 1207452 1209662 1 + . ID=LTnewLM_290036500 LTnewLM_29 AUGUSTUS mRNA 1207452 1209662 1 + . ID=LTnewLM_290036500.1;Parent=LTnewLM_290036500 LTnewLM_29 AUGUSTUS CDS 1207452 1209662 1 + 0 ID=LTnewLM_290036500.1:CDS:1;Parent=LTnewLM_290036500.1 ### LTnewLM_29 . polypeptide 1207452 1209662 . + . ID=LTnewLM_290036500.1:pep;Derives_from=LTnewLM_290036500.1;orthologous_to=LmjF.29.2810_mRNA;ortholog_cluster=OG0003962;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_29 Pfam protein_match 1207974 1208024 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208043 1208108 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208235 1208294 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208319 1208378 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208400 1208456 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208742 1208807 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208826 1208888 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208907 1208945 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_29 Pfam protein_match 1208991 1209035 . + . Parent=LTnewLM_290036500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_29 AUGUSTUS gene 1210412 1211146 1 + . ID=LTnewLM_290036600 LTnewLM_29 AUGUSTUS mRNA 1210412 1211146 1 + . ID=LTnewLM_290036600.1;Parent=LTnewLM_290036600 LTnewLM_29 AUGUSTUS CDS 1210412 1211146 1 + 0 ID=LTnewLM_290036600.1:CDS:1;Parent=LTnewLM_290036600.1 ### LTnewLM_29 . polypeptide 1210412 1211146 . + . ID=LTnewLM_290036600.1:pep;Derives_from=LTnewLM_290036600.1;orthologous_to=LmjF.29.2820_mRNA;ortholog_cluster=OG0003963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1212245 1212877 1 + . ID=LTnewLM_290036700 LTnewLM_29 AUGUSTUS mRNA 1212245 1212877 1 + . ID=LTnewLM_290036700.1;Parent=LTnewLM_290036700 LTnewLM_29 AUGUSTUS CDS 1212245 1212877 1 + 0 ID=LTnewLM_290036700.1:CDS:1;Parent=LTnewLM_290036700.1 ### LTnewLM_29 . polypeptide 1212245 1212877 . + . ID=LTnewLM_290036700.1:pep;Derives_from=LTnewLM_290036700.1;orthologous_to=LmjF.29.2830_mRNA;ortholog_cluster=OG0003964;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_29 Pfam protein_match 1212587 1212796 . + . Parent=LTnewLM_290036700.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_29 AUGUSTUS gene 1217471 1218412 1 + . ID=LTnewLM_290036800 LTnewLM_29 AUGUSTUS mRNA 1217471 1218412 1 + . ID=LTnewLM_290036800.1;Parent=LTnewLM_290036800 LTnewLM_29 AUGUSTUS CDS 1217471 1218412 1 + 0 ID=LTnewLM_290036800.1:CDS:1;Parent=LTnewLM_290036800.1 ### LTnewLM_29 . polypeptide 1217471 1218412 . + . ID=LTnewLM_290036800.1:pep;Derives_from=LTnewLM_290036800.1;orthologous_to=LmjF.29.2840_mRNA;ortholog_cluster=OG0003965;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_29 Pfam protein_match 1218152 1218346 . + . Parent=LTnewLM_290036800.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_29 AUGUSTUS gene 1218830 1219207 1 + . ID=LTnewLM_290036900 LTnewLM_29 AUGUSTUS mRNA 1218830 1219207 1 + . ID=LTnewLM_290036900.1;Parent=LTnewLM_290036900 LTnewLM_29 AUGUSTUS CDS 1218830 1219207 1 + 0 ID=LTnewLM_290036900.1:CDS:1;Parent=LTnewLM_290036900.1 ### LTnewLM_29 . polypeptide 1218830 1219207 . + . ID=LTnewLM_290036900.1:pep;Derives_from=LTnewLM_290036900.1;orthologous_to=LmjF.29.2850_mRNA;ortholog_cluster=OG0003966;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1219717 1220202 1 + . ID=LTnewLM_290037000 LTnewLM_29 AUGUSTUS mRNA 1219717 1220202 1 + . ID=LTnewLM_290037000.1;Parent=LTnewLM_290037000 LTnewLM_29 AUGUSTUS CDS 1219717 1220202 1 + 0 ID=LTnewLM_290037000.1:CDS:1;Parent=LTnewLM_290037000.1 ### LTnewLM_29 . polypeptide 1219717 1220202 . + . ID=LTnewLM_290037000.1:pep;Derives_from=LTnewLM_290037000.1;orthologous_to=LmjF.29.2860_mRNA;ortholog_cluster=OG0003967;product=term%3DRibosomal protein S19e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01090;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_29 Pfam protein_match 1219768 1220169 . + . Parent=LTnewLM_290037000.1:pep;Name=PF01090;signature_desc=Ribosomal protein S19e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_29 AUGUSTUS gene 1220839 1221996 1 + . ID=LTnewLM_290037100 LTnewLM_29 AUGUSTUS mRNA 1220839 1221996 1 + . ID=LTnewLM_290037100.1;Parent=LTnewLM_290037100 LTnewLM_29 AUGUSTUS CDS 1220839 1221996 1 + 0 ID=LTnewLM_290037100.1:CDS:1;Parent=LTnewLM_290037100.1 ### LTnewLM_29 . polypeptide 1220839 1221996 . + . ID=LTnewLM_290037100.1:pep;Derives_from=LTnewLM_290037100.1;orthologous_to=LmjF.29.2870_mRNA;ortholog_cluster=OG0003968;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 . pseudogene 1226097 1228441 . + . ID=LTnewLM_290037200:pseudogene;coverage=0.999;sequence_ID=0.902;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.29.2880_0;has_internal_stop=true LTnewLM_29 . pseudogenic_transcript 1226097 1228441 . + . ID=LTnewLM_290037200.1;Parent=LTnewLM_290037200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_29 . pseudogenic_exon 1226097 1228441 . + . ID=LTnewLM_290037200.1:pseudogenic_exon:1;Parent=LTnewLM_290037200.1;extra_copy_number=0 ### LTnewLM_29 . polypeptide 1226097 1228441 . + . ID=LTnewLM_290037200.1:pep;Derives_from=LTnewLM_290037200.1;product=term%3Dhypothetical protein ### LTnewLM_29 . polypeptide 1231631 1231920 . - . ID=LTnewLM_290037300.1:pep;Derives_from=LTnewLM_290037300.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_29 AUGUSTUS gene 1231631 1232166 0.88 - . ID=LTnewLM_290037300;fiveEndPartial=true;End_range=.,. LTnewLM_29 AUGUSTUS mRNA 1231631 1232166 0.88 - . ID=LTnewLM_290037300.1;Parent=LTnewLM_290037300 LTnewLM_29 AUGUSTUS CDS 1231631 1231920 0.88 - 2 ID=LTnewLM_290037300.1:CDS:1;Parent=LTnewLM_290037300.1 ### LTnewLM_3 AUGUSTUS gene 1 512 0.94 + . ID=LTnewLM_030005000;fiveEndPartial=true;Start_range=.,. LTnewLM_3 AUGUSTUS mRNA 1 512 0.94 + . ID=LTnewLM_030005000.1;Parent=LTnewLM_030005000 LTnewLM_3 AUGUSTUS CDS 313 512 0.94 + 2 ID=LTnewLM_030005000.1:CDS:1;Parent=LTnewLM_030005000.1 ### LTnewLM_3 . contig 1 388914 . + . Name=LTnewLM_CTG000030 LTnewLM_3 . polypeptide 313 512 . + . ID=LTnewLM_030005000.1:pep;Derives_from=LTnewLM_030005000.1;orthologous_to=LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 1643 4672 0.89 - . ID=LTnewLM_030005100 LTnewLM_3 AUGUSTUS mRNA 1643 4672 0.89 - . ID=LTnewLM_030005100.1;Parent=LTnewLM_030005100 LTnewLM_3 AUGUSTUS CDS 1643 4672 0.89 - 0 ID=LTnewLM_030005100.1:CDS:1;Parent=LTnewLM_030005100.1 ### LTnewLM_3 . polypeptide 1643 4672 . - . ID=LTnewLM_030005100.1:pep;Derives_from=LTnewLM_030005100.1;orthologous_to=LmjF.03.0010_mRNA;ortholog_cluster=OG0003969;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 5954 6760 1 + . ID=LTnewLM_030005200 LTnewLM_3 AUGUSTUS mRNA 5954 6760 1 + . ID=LTnewLM_030005200.1;Parent=LTnewLM_030005200 LTnewLM_3 AUGUSTUS CDS 5954 6760 1 + 0 ID=LTnewLM_030005200.1:CDS:1;Parent=LTnewLM_030005200.1 ### LTnewLM_3 . polypeptide 5954 6760 . + . ID=LTnewLM_030005200.1:pep;Derives_from=LTnewLM_030005200.1;orthologous_to=LmjF.03.0020_mRNA;ortholog_cluster=OG0003970;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 7491 8714 1 + . ID=LTnewLM_030005300 LTnewLM_3 AUGUSTUS mRNA 7491 8714 1 + . ID=LTnewLM_030005300.1;Parent=LTnewLM_030005300 LTnewLM_3 AUGUSTUS CDS 7491 8714 1 + 0 ID=LTnewLM_030005300.1:CDS:1;Parent=LTnewLM_030005300.1 ### LTnewLM_3 . polypeptide 7491 8714 . + . ID=LTnewLM_030005300.1:pep;Derives_from=LTnewLM_030005300.1;orthologous_to=LmjF.03.0030_mRNA;ortholog_cluster=OG0003971;product=term%3DD-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain/D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain/NAD binding domain of 6-phosphogluconate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00389|Pfam:PF02826|Pfam:PF03446;Ontology_term=GO:0008152,GO:0051287,GO:0055114,GO:0004616,GO:0016616,GO:0006098 LTnewLM_3 Pfam protein_match 7524 8456 . + . Parent=LTnewLM_030005300.1:pep;Name=PF00389;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain;Ontology_term=GO:0016616,GO:0051287,GO:0008152,GO:0055114 LTnewLM_3 Pfam protein_match 7833 8360 . + . Parent=LTnewLM_030005300.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 LTnewLM_3 Pfam protein_match 7938 8246 . + . Parent=LTnewLM_030005300.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 ### LTnewLM_3 AUGUSTUS gene 9649 10794 1 + . ID=LTnewLM_030005400 LTnewLM_3 AUGUSTUS mRNA 9649 10794 1 + . ID=LTnewLM_030005400.1;Parent=LTnewLM_030005400 LTnewLM_3 AUGUSTUS CDS 9649 10794 1 + 0 ID=LTnewLM_030005400.1:CDS:1;Parent=LTnewLM_030005400.1 ### LTnewLM_3 . polypeptide 9649 10794 . + . ID=LTnewLM_030005400.1:pep;Derives_from=LTnewLM_030005400.1;orthologous_to=LmjF.03.0040_mRNA;ortholog_cluster=OG0003972;product=term%3DAminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00266;Ontology_term=GO:0008152 LTnewLM_3 Pfam protein_match 9826 10662 . + . Parent=LTnewLM_030005400.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_3 AUGUSTUS gene 13954 15126 1 + . ID=LTnewLM_030005500 LTnewLM_3 AUGUSTUS mRNA 13954 15126 1 + . ID=LTnewLM_030005500.1;Parent=LTnewLM_030005500 LTnewLM_3 AUGUSTUS CDS 13954 15126 1 + 0 ID=LTnewLM_030005500.1:CDS:1;Parent=LTnewLM_030005500.1 ### LTnewLM_3 . polypeptide 13954 15126 . + . ID=LTnewLM_030005500.1:pep;Derives_from=LTnewLM_030005500.1;orthologous_to=LmjF.03.0060_mRNA;ortholog_cluster=OG0003973;product=term%3DMet-10+ like-protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02475 LTnewLM_3 Pfam protein_match 14527 14958 . + . Parent=LTnewLM_030005500.1:pep;Name=PF02475;signature_desc=Met-10+ like-protein ### LTnewLM_3 AUGUSTUS gene 15994 18495 1 + . ID=LTnewLM_030005600 LTnewLM_3 AUGUSTUS mRNA 15994 18495 1 + . ID=LTnewLM_030005600.1;Parent=LTnewLM_030005600 LTnewLM_3 AUGUSTUS CDS 15994 18495 1 + 0 ID=LTnewLM_030005600.1:CDS:1;Parent=LTnewLM_030005600.1 ### LTnewLM_3 . polypeptide 15994 18495 . + . ID=LTnewLM_030005600.1:pep;Derives_from=LTnewLM_030005600.1;orthologous_to=LmjF.03.0070_mRNA;ortholog_cluster=OG0003974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 18958 21111 1 + . ID=LTnewLM_030005700 LTnewLM_3 AUGUSTUS mRNA 18958 21111 1 + . ID=LTnewLM_030005700.1;Parent=LTnewLM_030005700 LTnewLM_3 AUGUSTUS CDS 18958 21111 1 + 0 ID=LTnewLM_030005700.1:CDS:1;Parent=LTnewLM_030005700.1 ### LTnewLM_3 . polypeptide 18958 21111 . + . ID=LTnewLM_030005700.1:pep;Derives_from=LTnewLM_030005700.1;orthologous_to=LmjF.03.0080_mRNA;ortholog_cluster=OG0003975;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_3 Pfam protein_match 19462 20091 . + . Parent=LTnewLM_030005700.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_3 AUGUSTUS gene 22362 24065 1 + . ID=LTnewLM_030005800 LTnewLM_3 AUGUSTUS mRNA 22362 24065 1 + . ID=LTnewLM_030005800.1;Parent=LTnewLM_030005800 LTnewLM_3 AUGUSTUS CDS 22362 24065 1 + 0 ID=LTnewLM_030005800.1:CDS:1;Parent=LTnewLM_030005800.1 ### LTnewLM_3 . polypeptide 22362 24065 . + . ID=LTnewLM_030005800.1:pep;Derives_from=LTnewLM_030005800.1;orthologous_to=LmjF.03.0090_mRNA;ortholog_cluster=OG0003976;product=term%3DEukaryotic and archaeal DNA primase%2C large subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04104;Ontology_term=GO:0003896,GO:0006269 LTnewLM_3 Pfam protein_match 23073 23936 . + . Parent=LTnewLM_030005800.1:pep;Name=PF04104;signature_desc=Eukaryotic and archaeal DNA primase%2C large subunit;Ontology_term=GO:0003896,GO:0006269 ### LTnewLM_3 AUGUSTUS gene 25256 26017 1 + . ID=LTnewLM_030005900 LTnewLM_3 AUGUSTUS mRNA 25256 26017 1 + . ID=LTnewLM_030005900.1;Parent=LTnewLM_030005900 LTnewLM_3 AUGUSTUS CDS 25256 26017 1 + 0 ID=LTnewLM_030005900.1:CDS:1;Parent=LTnewLM_030005900.1 ### LTnewLM_3 . polypeptide 25256 26017 . + . ID=LTnewLM_030005900.1:pep;Derives_from=LTnewLM_030005900.1;orthologous_to=LmjF.03.0100_mRNA;ortholog_cluster=OG0003977;product=term%3DCytochrome c oxidase assembly protein CtaG/Cox11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04442;Ontology_term=GO:0005507 LTnewLM_3 Pfam protein_match 25508 25969 . + . Parent=LTnewLM_030005900.1:pep;Name=PF04442;signature_desc=Cytochrome c oxidase assembly protein CtaG/Cox11;Ontology_term=GO:0005507 ### LTnewLM_3 AUGUSTUS gene 27255 29930 1 + . ID=LTnewLM_030006000 LTnewLM_3 AUGUSTUS mRNA 27255 29930 1 + . ID=LTnewLM_030006000.1;Parent=LTnewLM_030006000 LTnewLM_3 AUGUSTUS CDS 27255 29930 1 + 0 ID=LTnewLM_030006000.1:CDS:1;Parent=LTnewLM_030006000.1 ### LTnewLM_3 . polypeptide 27255 29930 . + . ID=LTnewLM_030006000.1:pep;Derives_from=LTnewLM_030006000.1;orthologous_to=LmjF.03.0110_mRNA;ortholog_cluster=OG0003978;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 30678 33455 1 + . ID=LTnewLM_030006100 LTnewLM_3 AUGUSTUS mRNA 30678 33455 1 + . ID=LTnewLM_030006100.1;Parent=LTnewLM_030006100 LTnewLM_3 AUGUSTUS CDS 30678 33455 1 + 0 ID=LTnewLM_030006100.1:CDS:1;Parent=LTnewLM_030006100.1 ### LTnewLM_3 . polypeptide 30678 33455 . + . ID=LTnewLM_030006100.1:pep;Derives_from=LTnewLM_030006100.1;orthologous_to=LmjF.03.0120_mRNA;ortholog_cluster=OG0003979;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 34401 34949 1 + . ID=LTnewLM_030006200 LTnewLM_3 AUGUSTUS mRNA 34401 34949 1 + . ID=LTnewLM_030006200.1;Parent=LTnewLM_030006200 LTnewLM_3 AUGUSTUS CDS 34401 34949 1 + 0 ID=LTnewLM_030006200.1:CDS:1;Parent=LTnewLM_030006200.1 ### LTnewLM_3 . polypeptide 34401 34949 . + . ID=LTnewLM_030006200.1:pep;Derives_from=LTnewLM_030006200.1;orthologous_to=LmjF.03.0130_mRNA;ortholog_cluster=OG0003980;product=term%3DAcetyltransferase (GNAT) family/Acetyltransferase (GNAT) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583|Pfam:PF13673|Pfam:PF13508;Ontology_term=GO:0008080 LTnewLM_3 Pfam protein_match 34515 34832 . + . Parent=LTnewLM_030006200.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 LTnewLM_3 Pfam protein_match 34566 34844 . + . Parent=LTnewLM_030006200.1:pep;Name=PF13673;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_3 Pfam protein_match 34602 34838 . + . Parent=LTnewLM_030006200.1:pep;Name=PF13508;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 ### LTnewLM_3 AUGUSTUS gene 35823 36242 1 + . ID=LTnewLM_030006300 LTnewLM_3 AUGUSTUS mRNA 35823 36242 1 + . ID=LTnewLM_030006300.1;Parent=LTnewLM_030006300 LTnewLM_3 AUGUSTUS CDS 35823 36242 1 + 0 ID=LTnewLM_030006300.1:CDS:1;Parent=LTnewLM_030006300.1 ### LTnewLM_3 . polypeptide 35823 36242 . + . ID=LTnewLM_030006300.1:pep;Derives_from=LTnewLM_030006300.1;orthologous_to=LmjF.03.0140_mRNA;ortholog_cluster=OG0003981;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 37461 38396 1 + . ID=LTnewLM_030006400 LTnewLM_3 AUGUSTUS mRNA 37461 38396 1 + . ID=LTnewLM_030006400.1;Parent=LTnewLM_030006400 LTnewLM_3 AUGUSTUS CDS 37461 38396 1 + 0 ID=LTnewLM_030006400.1:CDS:1;Parent=LTnewLM_030006400.1 ### LTnewLM_3 . polypeptide 37461 38396 . + . ID=LTnewLM_030006400.1:pep;Derives_from=LTnewLM_030006400.1;orthologous_to=LmjF.03.0150_mRNA;ortholog_cluster=OG0003982;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 39254 41425 1 + . ID=LTnewLM_030006500 LTnewLM_3 AUGUSTUS mRNA 39254 41425 1 + . ID=LTnewLM_030006500.1;Parent=LTnewLM_030006500 LTnewLM_3 AUGUSTUS CDS 39254 41425 1 + 0 ID=LTnewLM_030006500.1:CDS:1;Parent=LTnewLM_030006500.1 ### LTnewLM_3 . polypeptide 39254 41425 . + . ID=LTnewLM_030006500.1:pep;Derives_from=LTnewLM_030006500.1;orthologous_to=LmjF.03.0160_mRNA;ortholog_cluster=OG0003983;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF12848;Ontology_term=GO:0016887,GO:0005524 LTnewLM_3 Pfam protein_match 39905 40381 . + . Parent=LTnewLM_030006500.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_3 Pfam protein_match 40499 40744 . + . Parent=LTnewLM_030006500.1:pep;Name=PF12848;signature_desc=ABC transporter LTnewLM_3 Pfam protein_match 40838 41227 . + . Parent=LTnewLM_030006500.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_3 AUGUSTUS gene 42420 42998 1 + . ID=LTnewLM_030006600 LTnewLM_3 AUGUSTUS mRNA 42420 42998 1 + . ID=LTnewLM_030006600.1;Parent=LTnewLM_030006600 LTnewLM_3 AUGUSTUS CDS 42420 42998 1 + 0 ID=LTnewLM_030006600.1:CDS:1;Parent=LTnewLM_030006600.1 ### LTnewLM_3 . polypeptide 42420 42998 . + . ID=LTnewLM_030006600.1:pep;Derives_from=LTnewLM_030006600.1;orthologous_to=LmjF.03.0170_mRNA;ortholog_cluster=OG0003984;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 43288 45471 1 + . ID=LTnewLM_030006700 LTnewLM_3 AUGUSTUS mRNA 43288 45471 1 + . ID=LTnewLM_030006700.1;Parent=LTnewLM_030006700 LTnewLM_3 AUGUSTUS CDS 43288 45471 1 + 0 ID=LTnewLM_030006700.1:CDS:1;Parent=LTnewLM_030006700.1 ### LTnewLM_3 . polypeptide 43288 45471 . + . ID=LTnewLM_030006700.1:pep;Derives_from=LTnewLM_030006700.1;orthologous_to=LmjF.03.0180_mRNA;ortholog_cluster=OG0003985;product=term%3Dzinc-finger of acetyl-transferase ESCO%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13878 LTnewLM_3 Pfam protein_match 44095 44211 . + . Parent=LTnewLM_030006700.1:pep;Name=PF13878;signature_desc=zinc-finger of acetyl-transferase ESCO ### LTnewLM_3 AUGUSTUS gene 46333 46965 1 + . ID=LTnewLM_030006800 LTnewLM_3 AUGUSTUS mRNA 46333 46965 1 + . ID=LTnewLM_030006800.1;Parent=LTnewLM_030006800 LTnewLM_3 AUGUSTUS CDS 46333 46965 1 + 0 ID=LTnewLM_030006800.1:CDS:1;Parent=LTnewLM_030006800.1 ### LTnewLM_3 . polypeptide 46333 46965 . + . ID=LTnewLM_030006800.1:pep;Derives_from=LTnewLM_030006800.1;orthologous_to=LmjF.03.0190_mRNA;ortholog_cluster=OG0003986;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)/RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642|Pfam:PF00076;Ontology_term=GO:0046872,GO:0003676 LTnewLM_3 Pfam protein_match 46351 46401 . + . Parent=LTnewLM_030006800.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_3 Pfam protein_match 46555 46710 . + . Parent=LTnewLM_030006800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_3 AUGUSTUS gene 48509 50191 1 + . ID=LTnewLM_030006900 LTnewLM_3 AUGUSTUS mRNA 48509 50191 1 + . ID=LTnewLM_030006900.1;Parent=LTnewLM_030006900 LTnewLM_3 AUGUSTUS CDS 48509 50191 1 + 0 ID=LTnewLM_030006900.1:CDS:1;Parent=LTnewLM_030006900.1 ### LTnewLM_3 . polypeptide 48509 50191 . + . ID=LTnewLM_030006900.1:pep;Derives_from=LTnewLM_030006900.1;orthologous_to=LmjF.03.0200_mRNA;ortholog_cluster=OG0003987;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_3 Pfam protein_match 48701 50110 . + . Parent=LTnewLM_030006900.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_3 AUGUSTUS gene 52062 53201 1 + . ID=LTnewLM_030007000 LTnewLM_3 AUGUSTUS mRNA 52062 53201 1 + . ID=LTnewLM_030007000.1;Parent=LTnewLM_030007000 LTnewLM_3 AUGUSTUS CDS 52062 53201 1 + 0 ID=LTnewLM_030007000.1:CDS:1;Parent=LTnewLM_030007000.1 ### LTnewLM_3 . polypeptide 52062 53201 . + . ID=LTnewLM_030007000.1:pep;Derives_from=LTnewLM_030007000.1;orthologous_to=LmjF.03.0210_mRNA;ortholog_cluster=OG0003988;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_3 Pfam protein_match 52104 53012 . + . Parent=LTnewLM_030007000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_3 Pfam protein_match 52107 52682 . + . Parent=LTnewLM_030007000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_3 AUGUSTUS gene 54217 55158 1 + . ID=LTnewLM_030007100 LTnewLM_3 AUGUSTUS mRNA 54217 55158 1 + . ID=LTnewLM_030007100.1;Parent=LTnewLM_030007100 LTnewLM_3 AUGUSTUS CDS 54217 55158 1 + 0 ID=LTnewLM_030007100.1:CDS:1;Parent=LTnewLM_030007100.1 ### LTnewLM_3 . polypeptide 54217 55158 . + . ID=LTnewLM_030007100.1:pep;Derives_from=LTnewLM_030007100.1;orthologous_to=LmjF.03.0220_mRNA;ortholog_cluster=OG0003989;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 56112 58226 1 + . ID=LTnewLM_030007200 LTnewLM_3 AUGUSTUS mRNA 56112 58226 1 + . ID=LTnewLM_030007200.1;Parent=LTnewLM_030007200 LTnewLM_3 AUGUSTUS CDS 56112 58226 1 + 0 ID=LTnewLM_030007200.1:CDS:1;Parent=LTnewLM_030007200.1 ### LTnewLM_3 . polypeptide 56112 58226 . + . ID=LTnewLM_030007200.1:pep;Derives_from=LTnewLM_030007200.1;orthologous_to=LmjF.03.0230_mRNA;ortholog_cluster=OG0003990;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_3 Pfam protein_match 56454 57806 . + . Parent=LTnewLM_030007200.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_3 AUGUSTUS gene 61008 61472 1 + . ID=LTnewLM_030007300 LTnewLM_3 AUGUSTUS mRNA 61008 61472 1 + . ID=LTnewLM_030007300.1;Parent=LTnewLM_030007300 LTnewLM_3 AUGUSTUS CDS 61008 61472 1 + 0 ID=LTnewLM_030007300.1:CDS:1;Parent=LTnewLM_030007300.1 ### LTnewLM_3 . polypeptide 61008 61472 . + . ID=LTnewLM_030007300.1:pep;Derives_from=LTnewLM_030007300.1;orthologous_to=LmjF.03.0240_mRNA;ortholog_cluster=OG0003991;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 62096 62347 1 + . ID=LTnewLM_030007400 LTnewLM_3 AUGUSTUS mRNA 62096 62347 1 + . ID=LTnewLM_030007400.1;Parent=LTnewLM_030007400 LTnewLM_3 AUGUSTUS CDS 62096 62347 1 + 0 ID=LTnewLM_030007400.1:CDS:1;Parent=LTnewLM_030007400.1 ### LTnewLM_3 . polypeptide 62096 62347 . + . ID=LTnewLM_030007400.1:pep;Derives_from=LTnewLM_030007400.1;orthologous_to=LTnewLM_260028000.1,LmjF.03.0250_mRNA,LmjF.26.2220_mRNA;ortholog_cluster=OG0000187;product=term%3DRibosomal L38e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01781;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_3 Pfam protein_match 62099 62296 . + . Parent=LTnewLM_030007400.1:pep;Name=PF01781;signature_desc=Ribosomal L38e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_3 AUGUSTUS gene 63506 64549 1 + . ID=LTnewLM_030007500 LTnewLM_3 AUGUSTUS mRNA 63506 64549 1 + . ID=LTnewLM_030007500.1;Parent=LTnewLM_030007500 LTnewLM_3 AUGUSTUS CDS 63506 64549 1 + 0 ID=LTnewLM_030007500.1:CDS:1;Parent=LTnewLM_030007500.1 ### LTnewLM_3 . polypeptide 63506 64549 . + . ID=LTnewLM_030007500.1:pep;Derives_from=LTnewLM_030007500.1;orthologous_to=LmjF.03.0260_mRNA;ortholog_cluster=OG0003992;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 65986 73328 0.61 + . ID=LTnewLM_030007600 LTnewLM_3 AUGUSTUS mRNA 65986 73328 0.61 + . ID=LTnewLM_030007600.1;Parent=LTnewLM_030007600 LTnewLM_3 AUGUSTUS CDS 65986 66999 1 + 0 ID=LTnewLM_030007600.1:CDS:1;Parent=LTnewLM_030007600.1 LTnewLM_3 AUGUSTUS CDS 67098 73328 0.61 + 0 ID=LTnewLM_030007600.1:CDS:2;Parent=LTnewLM_030007600.1 ### LTnewLM_3 . polypeptide 65986 73328 . + . ID=LTnewLM_030007600.1:pep;Derives_from=LTnewLM_030007600.1;orthologous_to=LmjF.03.0270_mRNA;ortholog_cluster=OG0003993;product=term%3DFYVE zinc finger/Apolipoprotein A1/A4/E domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363|Pfam:PF01442;Ontology_term=GO:0006869,GO:0042157,GO:0008289,GO:0046872,GO:0005576 LTnewLM_3 Pfam protein_match 66022 66219 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_3 Pfam protein_match 66484 66858 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 66862 67002 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 66985 67227 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 67234 67467 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 67345 67701 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 67462 67815 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 67702 67932 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 67936 68280 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68020 68400 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68287 68517 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68521 68751 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68755 68985 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68872 69102 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 68989 69219 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69073 69453 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69196 69570 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69424 69807 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69556 69921 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69808 70038 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 69925 70155 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70012 70389 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70276 70503 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70393 70623 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70495 70857 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70744 70974 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70861 71091 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 70978 71208 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 LTnewLM_3 Pfam protein_match 71098 71589 . + . Parent=LTnewLM_030007600.1:pep;Name=PF01442;signature_desc=Apolipoprotein A1/A4/E domain;Ontology_term=GO:0008289,GO:0006869,GO:0042157,GO:0005576 ### LTnewLM_3 AUGUSTUS gene 74234 77185 1 + . ID=LTnewLM_030007700 LTnewLM_3 AUGUSTUS mRNA 74234 77185 1 + . ID=LTnewLM_030007700.1;Parent=LTnewLM_030007700 LTnewLM_3 AUGUSTUS CDS 74234 77185 1 + 0 ID=LTnewLM_030007700.1:CDS:1;Parent=LTnewLM_030007700.1 ### LTnewLM_3 . polypeptide 74234 77185 . + . ID=LTnewLM_030007700.1:pep;Derives_from=LTnewLM_030007700.1;orthologous_to=LmjF.03.0280_mRNA;ortholog_cluster=OG0003994;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 77978 78424 0.99 + . ID=LTnewLM_030007800 LTnewLM_3 AUGUSTUS mRNA 77978 78424 0.99 + . ID=LTnewLM_030007800.1;Parent=LTnewLM_030007800 LTnewLM_3 AUGUSTUS CDS 77978 78424 0.99 + 0 ID=LTnewLM_030007800.1:CDS:1;Parent=LTnewLM_030007800.1 ### LTnewLM_3 . polypeptide 77978 78424 . + . ID=LTnewLM_030007800.1:pep;Derives_from=LTnewLM_030007800.1;product=term%3Dhypothetical protein ### LTnewLM_3 AUGUSTUS gene 78526 79164 0.73 + . ID=LTnewLM_030007900 LTnewLM_3 AUGUSTUS mRNA 78526 79164 0.73 + . ID=LTnewLM_030007900.1;Parent=LTnewLM_030007900 LTnewLM_3 AUGUSTUS CDS 78526 78695 0.78 + 0 ID=LTnewLM_030007900.1:CDS:1;Parent=LTnewLM_030007900.1 LTnewLM_3 AUGUSTUS CDS 78870 79164 0.85 + 1 ID=LTnewLM_030007900.1:CDS:2;Parent=LTnewLM_030007900.1 ### LTnewLM_3 . polypeptide 78526 79164 . + . ID=LTnewLM_030007900.1:pep;Derives_from=LTnewLM_030007900.1;product=term%3Dhypothetical protein ### LTnewLM_3 . pseudogene 83400 89824 . + . ID=LTnewLM_030008000:pseudogene;coverage=0.980;sequence_ID=0.863;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.03.0310_0;has_internal_stop=true LTnewLM_3 . pseudogenic_transcript 83400 89824 . + . ID=LTnewLM_030008000.1;Parent=LTnewLM_030008000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_3 . pseudogenic_exon 83400 89824 . + . ID=LTnewLM_030008000.1:pseudogenic_exon:1;Parent=LTnewLM_030008000.1;extra_copy_number=0 ### LTnewLM_3 . polypeptide 83400 89824 . + . ID=LTnewLM_030008000.1:pep;Derives_from=LTnewLM_030008000.1;product=term%3Dhypothetical protein ### LTnewLM_3 AUGUSTUS gene 90837 93896 1 + . ID=LTnewLM_030008100 LTnewLM_3 AUGUSTUS mRNA 90837 93896 1 + . ID=LTnewLM_030008100.1;Parent=LTnewLM_030008100 LTnewLM_3 AUGUSTUS CDS 90837 93896 1 + 0 ID=LTnewLM_030008100.1:CDS:1;Parent=LTnewLM_030008100.1 ### LTnewLM_3 . polypeptide 90837 93896 . + . ID=LTnewLM_030008100.1:pep;Derives_from=LTnewLM_030008100.1;orthologous_to=LmjF.03.0320_mRNA;ortholog_cluster=OG0003995;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 Liftoff gene 94826 97009 . + . ID=LTnewLM_030008200;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.03.0330_0 LTnewLM_3 Liftoff mRNA 94826 97009 . + . ID=LTnewLM_030008200.1;Parent=LTnewLM_030008200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_3 Liftoff CDS 94826 97009 . + 0 ID=LTnewLM_030008200.1:CDS:1;Parent=LTnewLM_030008200.1;extra_copy_number=0 ### LTnewLM_3 . polypeptide 94826 97009 . + . ID=LTnewLM_030008200.1:pep;Derives_from=LTnewLM_030008200.1;orthologous_to=LmjF.03.0330_mRNA;ortholog_cluster=OG0003996;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 97892 98922 0.74 + . ID=LTnewLM_030008300 LTnewLM_3 AUGUSTUS mRNA 97892 98922 0.74 + . ID=LTnewLM_030008300.1;Parent=LTnewLM_030008300 LTnewLM_3 AUGUSTUS CDS 97892 98515 0.99 + 0 ID=LTnewLM_030008300.1:CDS:1;Parent=LTnewLM_030008300.1 LTnewLM_3 AUGUSTUS CDS 98563 98922 0.74 + 0 ID=LTnewLM_030008300.1:CDS:2;Parent=LTnewLM_030008300.1 ### LTnewLM_3 . polypeptide 97892 98922 . + . ID=LTnewLM_030008300.1:pep;Derives_from=LTnewLM_030008300.1;orthologous_to=LmjF.03.0340_mRNA;ortholog_cluster=OG0003997;product=term%3DDDRGK domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09756 LTnewLM_3 Pfam protein_match 98294 98860 . + . Parent=LTnewLM_030008300.1:pep;Name=PF09756;signature_desc=DDRGK domain ### LTnewLM_3 AUGUSTUS gene 100085 104626 1 + . ID=LTnewLM_030008400 LTnewLM_3 AUGUSTUS mRNA 100085 104626 1 + . ID=LTnewLM_030008400.1;Parent=LTnewLM_030008400 LTnewLM_3 AUGUSTUS CDS 100085 104626 1 + 0 ID=LTnewLM_030008400.1:CDS:1;Parent=LTnewLM_030008400.1 ### LTnewLM_3 . polypeptide 100085 104626 . + . ID=LTnewLM_030008400.1:pep;Derives_from=LTnewLM_030008400.1;orthologous_to=LmjF.03.0350_mRNA;ortholog_cluster=OG0003998;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_3 Pfam protein_match 102476 103207 . + . Parent=LTnewLM_030008400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_3 Pfam protein_match 102491 102808 . + . Parent=LTnewLM_030008400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_3 AUGUSTUS gene 108487 113415 1 + . ID=LTnewLM_030008500 LTnewLM_3 AUGUSTUS mRNA 108487 113415 1 + . ID=LTnewLM_030008500.1;Parent=LTnewLM_030008500 LTnewLM_3 AUGUSTUS CDS 108487 113415 1 + 0 ID=LTnewLM_030008500.1:CDS:1;Parent=LTnewLM_030008500.1 ### LTnewLM_3 . polypeptide 108487 113415 . + . ID=LTnewLM_030008500.1:pep;Derives_from=LTnewLM_030008500.1;orthologous_to=LmjF.03.0360_mRNA;ortholog_cluster=OG0003999;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 116849 117781 1 + . ID=LTnewLM_030008600 LTnewLM_3 AUGUSTUS mRNA 116849 117781 1 + . ID=LTnewLM_030008600.1;Parent=LTnewLM_030008600 LTnewLM_3 AUGUSTUS CDS 116849 117781 1 + 0 ID=LTnewLM_030008600.1:CDS:1;Parent=LTnewLM_030008600.1 ### LTnewLM_3 . polypeptide 116849 117781 . + . ID=LTnewLM_030008600.1:pep;Derives_from=LTnewLM_030008600.1;orthologous_to=LmjF.03.0370_mRNA;ortholog_cluster=OG0004000;product=term%3DGPR1/FUN34/yaaH family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01184;Ontology_term=GO:0016021 LTnewLM_3 Pfam protein_match 117194 117706 . + . Parent=LTnewLM_030008600.1:pep;Name=PF01184;signature_desc=GPR1/FUN34/yaaH family;Ontology_term=GO:0016021 ### LTnewLM_3 AUGUSTUS gene 121323 122435 1 + . ID=LTnewLM_030008700 LTnewLM_3 AUGUSTUS mRNA 121323 122435 1 + . ID=LTnewLM_030008700.1;Parent=LTnewLM_030008700 LTnewLM_3 AUGUSTUS CDS 121323 122435 1 + 0 ID=LTnewLM_030008700.1:CDS:1;Parent=LTnewLM_030008700.1 ### LTnewLM_3 . polypeptide 121323 122435 . + . ID=LTnewLM_030008700.1:pep;Derives_from=LTnewLM_030008700.1;orthologous_to=LmjF.03.0380_mRNA;ortholog_cluster=OG0004001;product=term%3DGPR1/FUN34/yaaH family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01184;Ontology_term=GO:0016021 LTnewLM_3 Pfam protein_match 121722 122318 . + . Parent=LTnewLM_030008700.1:pep;Name=PF01184;signature_desc=GPR1/FUN34/yaaH family;Ontology_term=GO:0016021 ### LTnewLM_3 . pseudogene 125680 127041 . + . ID=LTnewLM_030008800:pseudogene;coverage=0.926;sequence_ID=0.845;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.03.0390_0;has_internal_stop=true LTnewLM_3 . pseudogenic_transcript 125680 127041 . + . ID=LTnewLM_030008800.1;Parent=LTnewLM_030008800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_3 . pseudogenic_exon 125680 127041 . + . ID=LTnewLM_030008800.1:pseudogenic_exon:1;Parent=LTnewLM_030008800.1;extra_copy_number=0 ### LTnewLM_3 . polypeptide 125680 127041 . + . ID=LTnewLM_030008800.1:pep;Derives_from=LTnewLM_030008800.1;orthologous_to=LmjF.03.0390_mRNA;ortholog_cluster=OG0007586;product=term%3DGPR1/FUN34/yaaH family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01184;Ontology_term=GO:0016021 LTnewLM_3 Pfam protein_match 125956 126141 . + . Parent=LTnewLM_030008800.1:pep;Name=PF01184;signature_desc=GPR1/FUN34/yaaH family;Ontology_term=GO:0016021 ### LTnewLM_3 AUGUSTUS gene 127356 128267 1 + . ID=LTnewLM_030008900 LTnewLM_3 AUGUSTUS mRNA 127356 128267 1 + . ID=LTnewLM_030008900.1;Parent=LTnewLM_030008900 LTnewLM_3 AUGUSTUS CDS 127356 128267 1 + 0 ID=LTnewLM_030008900.1:CDS:1;Parent=LTnewLM_030008900.1 ### LTnewLM_3 . polypeptide 127356 128267 . + . ID=LTnewLM_030008900.1:pep;Derives_from=LTnewLM_030008900.1;orthologous_to=LmjF.03.0400_mRNA;ortholog_cluster=OG0004002;product=term%3DGPR1/FUN34/yaaH family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01184;Ontology_term=GO:0016021 LTnewLM_3 Pfam protein_match 127593 128174 . + . Parent=LTnewLM_030008900.1:pep;Name=PF01184;signature_desc=GPR1/FUN34/yaaH family;Ontology_term=GO:0016021 ### LTnewLM_3 AUGUSTUS gene 131994 134036 1 + . ID=LTnewLM_030009000 LTnewLM_3 AUGUSTUS mRNA 131994 134036 1 + . ID=LTnewLM_030009000.1;Parent=LTnewLM_030009000 LTnewLM_3 AUGUSTUS CDS 131994 134036 1 + 0 ID=LTnewLM_030009000.1:CDS:1;Parent=LTnewLM_030009000.1 ### LTnewLM_3 . polypeptide 131994 134036 . + . ID=LTnewLM_030009000.1:pep;Derives_from=LTnewLM_030009000.1;orthologous_to=LmjF.03.0410_mRNA;ortholog_cluster=OG0004003;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_3 Pfam protein_match 132279 132860 . + . Parent=LTnewLM_030009000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_3 Pfam protein_match 133266 133838 . + . Parent=LTnewLM_030009000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_3 AUGUSTUS gene 136882 142059 1 + . ID=LTnewLM_030009100 LTnewLM_3 AUGUSTUS mRNA 136882 142059 1 + . ID=LTnewLM_030009100.1;Parent=LTnewLM_030009100 LTnewLM_3 AUGUSTUS CDS 136882 142059 1 + 0 ID=LTnewLM_030009100.1:CDS:1;Parent=LTnewLM_030009100.1 ### LTnewLM_3 . polypeptide 136882 142059 . + . ID=LTnewLM_030009100.1:pep;Derives_from=LTnewLM_030009100.1;orthologous_to=LmjF.03.0420_mRNA;ortholog_cluster=OG0004004;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 143076 143411 1 + . ID=LTnewLM_030009200 LTnewLM_3 AUGUSTUS mRNA 143076 143411 1 + . ID=LTnewLM_030009200.1;Parent=LTnewLM_030009200 LTnewLM_3 AUGUSTUS CDS 143076 143411 1 + 0 ID=LTnewLM_030009200.1:CDS:1;Parent=LTnewLM_030009200.1 ### LTnewLM_3 . polypeptide 143076 143411 . + . ID=LTnewLM_030009200.1:pep;Derives_from=LTnewLM_030009200.1;orthologous_to=LTnewLM_030009300.1,LmjF.03.0430_mRNA,LmjF.03.0440_mRNA;ortholog_cluster=OG0000208;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_3 Pfam protein_match 143142 143402 . + . Parent=LTnewLM_030009200.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_3 AUGUSTUS gene 144241 144576 1 + . ID=LTnewLM_030009300 LTnewLM_3 AUGUSTUS mRNA 144241 144576 1 + . ID=LTnewLM_030009300.1;Parent=LTnewLM_030009300 LTnewLM_3 AUGUSTUS CDS 144241 144576 1 + 0 ID=LTnewLM_030009300.1:CDS:1;Parent=LTnewLM_030009300.1 ### LTnewLM_3 . polypeptide 144241 144576 . + . ID=LTnewLM_030009300.1:pep;Derives_from=LTnewLM_030009300.1;orthologous_to=LTnewLM_030009200.1,LmjF.03.0430_mRNA,LmjF.03.0440_mRNA;ortholog_cluster=OG0000208;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_3 Pfam protein_match 144307 144567 . + . Parent=LTnewLM_030009300.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_3 AUGUSTUS gene 145404 150479 1 + . ID=LTnewLM_030009400 LTnewLM_3 AUGUSTUS mRNA 145404 150479 1 + . ID=LTnewLM_030009400.1;Parent=LTnewLM_030009400 LTnewLM_3 AUGUSTUS CDS 145404 150479 1 + 0 ID=LTnewLM_030009400.1:CDS:1;Parent=LTnewLM_030009400.1 ### LTnewLM_3 . polypeptide 145404 150479 . + . ID=LTnewLM_030009400.1:pep;Derives_from=LTnewLM_030009400.1;orthologous_to=LmjF.03.0450_mRNA;ortholog_cluster=OG0004005;product=term%3DTLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07534 LTnewLM_3 Pfam protein_match 150036 150359 . + . Parent=LTnewLM_030009400.1:pep;Name=PF07534;signature_desc=TLD ### LTnewLM_3 AUGUSTUS gene 156559 159738 1 + . ID=LTnewLM_030009500 LTnewLM_3 AUGUSTUS mRNA 156559 159738 1 + . ID=LTnewLM_030009500.1;Parent=LTnewLM_030009500 LTnewLM_3 AUGUSTUS CDS 156559 159738 1 + 0 ID=LTnewLM_030009500.1:CDS:1;Parent=LTnewLM_030009500.1 ### LTnewLM_3 . polypeptide 156559 159738 . + . ID=LTnewLM_030009500.1:pep;Derives_from=LTnewLM_030009500.1;orthologous_to=LmjF.03.0460_mRNA;ortholog_cluster=OG0004006;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 . pseudogene 164507 167514 . + . ID=LTnewLM_030009600:pseudogene;coverage=0.992;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.03.0470_0;has_internal_stop=true LTnewLM_3 . pseudogenic_transcript 164507 167514 . + . ID=LTnewLM_030009600.1;Parent=LTnewLM_030009600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_3 . pseudogenic_exon 164507 167514 . + . ID=LTnewLM_030009600.1:pseudogenic_exon:1;Parent=LTnewLM_030009600.1;extra_copy_number=0 ### LTnewLM_3 . polypeptide 164507 167514 . + . ID=LTnewLM_030009600.1:pep;Derives_from=LTnewLM_030009600.1;product=term%3Dhypothetical protein ### LTnewLM_3 AUGUSTUS gene 169011 172022 1 + . ID=LTnewLM_030009700 LTnewLM_3 AUGUSTUS mRNA 169011 172022 1 + . ID=LTnewLM_030009700.1;Parent=LTnewLM_030009700 LTnewLM_3 AUGUSTUS CDS 169011 172022 1 + 0 ID=LTnewLM_030009700.1:CDS:1;Parent=LTnewLM_030009700.1 ### LTnewLM_3 . polypeptide 169011 172022 . + . ID=LTnewLM_030009700.1:pep;Derives_from=LTnewLM_030009700.1;orthologous_to=LmjF.03.0480_mRNA;ortholog_cluster=OG0004007;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13637|Pfam:PF13606|Pfam:PF00023|Pfam:PF13857;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169254 169538 . + . Parent=LTnewLM_030009700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_3 Pfam protein_match 169356 169508 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 169446 169610 . + . Parent=LTnewLM_030009700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_3 Pfam protein_match 169449 169529 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169449 169538 . + . Parent=LTnewLM_030009700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169452 169604 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 169737 169961 . + . Parent=LTnewLM_030009700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_3 Pfam protein_match 169767 169856 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169770 169862 . + . Parent=LTnewLM_030009700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169773 169931 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 169848 169991 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 169869 169952 . + . Parent=LTnewLM_030009700.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169869 169961 . + . Parent=LTnewLM_030009700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 169869 170027 . + . Parent=LTnewLM_030009700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_3 AUGUSTUS gene 173692 176877 1 + . ID=LTnewLM_030009800 LTnewLM_3 AUGUSTUS mRNA 173692 176877 1 + . ID=LTnewLM_030009800.1;Parent=LTnewLM_030009800 LTnewLM_3 AUGUSTUS CDS 173692 176877 1 + 0 ID=LTnewLM_030009800.1:CDS:1;Parent=LTnewLM_030009800.1 ### LTnewLM_3 . polypeptide 173692 176877 . + . ID=LTnewLM_030009800.1:pep;Derives_from=LTnewLM_030009800.1;orthologous_to=LmjF.03.0490_mRNA;ortholog_cluster=OG0004008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 178208 179926 1 + . ID=LTnewLM_030009900 LTnewLM_3 AUGUSTUS mRNA 178208 179926 1 + . ID=LTnewLM_030009900.1;Parent=LTnewLM_030009900 LTnewLM_3 AUGUSTUS CDS 178208 179926 1 + 0 ID=LTnewLM_030009900.1:CDS:1;Parent=LTnewLM_030009900.1 ### LTnewLM_3 . polypeptide 178208 179926 . + . ID=LTnewLM_030009900.1:pep;Derives_from=LTnewLM_030009900.1;orthologous_to=LmjF.03.0500_mRNA;ortholog_cluster=OG0004009;product=term%3DPhosphate transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01384;Ontology_term=GO:0006817,GO:0016020,GO:0005315 LTnewLM_3 Pfam protein_match 178274 179869 . + . Parent=LTnewLM_030009900.1:pep;Name=PF01384;signature_desc=Phosphate transporter family;Ontology_term=GO:0005315,GO:0006817,GO:0016020 ### LTnewLM_3 AUGUSTUS gene 182424 190007 1 + . ID=LTnewLM_030010000 LTnewLM_3 AUGUSTUS mRNA 182424 190007 1 + . ID=LTnewLM_030010000.1;Parent=LTnewLM_030010000 LTnewLM_3 AUGUSTUS CDS 182424 190007 1 + 0 ID=LTnewLM_030010000.1:CDS:1;Parent=LTnewLM_030010000.1 ### LTnewLM_3 . polypeptide 182424 190007 . + . ID=LTnewLM_030010000.1:pep;Derives_from=LTnewLM_030010000.1;orthologous_to=LmjF.03.0510_mRNA;ortholog_cluster=OG0004010;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 190647 193202 1 + . ID=LTnewLM_030010100 LTnewLM_3 AUGUSTUS mRNA 190647 193202 1 + . ID=LTnewLM_030010100.1;Parent=LTnewLM_030010100 LTnewLM_3 AUGUSTUS CDS 190647 193202 1 + 0 ID=LTnewLM_030010100.1:CDS:1;Parent=LTnewLM_030010100.1 ### LTnewLM_3 . polypeptide 190647 193202 . + . ID=LTnewLM_030010100.1:pep;Derives_from=LTnewLM_030010100.1;orthologous_to=LmjF.03.0520_mRNA;ortholog_cluster=OG0004011;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_3 Pfam protein_match 191964 192128 . + . Parent=LTnewLM_030010100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_3 AUGUSTUS gene 194771 201319 1 + . ID=LTnewLM_030010200 LTnewLM_3 AUGUSTUS mRNA 194771 201319 1 + . ID=LTnewLM_030010200.1;Parent=LTnewLM_030010200 LTnewLM_3 AUGUSTUS CDS 194771 201319 1 + 0 ID=LTnewLM_030010200.1:CDS:1;Parent=LTnewLM_030010200.1 ### LTnewLM_3 . polypeptide 194771 201319 . + . ID=LTnewLM_030010200.1:pep;Derives_from=LTnewLM_030010200.1;orthologous_to=LmjF.03.0530_mRNA;ortholog_cluster=OG0004012;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 202896 204086 1 + . ID=LTnewLM_030010300 LTnewLM_3 AUGUSTUS mRNA 202896 204086 1 + . ID=LTnewLM_030010300.1;Parent=LTnewLM_030010300 LTnewLM_3 AUGUSTUS CDS 202896 204086 1 + 0 ID=LTnewLM_030010300.1:CDS:1;Parent=LTnewLM_030010300.1 ### LTnewLM_3 . polypeptide 202896 204086 . + . ID=LTnewLM_030010300.1:pep;Derives_from=LTnewLM_030010300.1;orthologous_to=LmjF.03.0540_mRNA;ortholog_cluster=OG0004013;product=term%3DProteasomal ATPase OB C-terminal domain/AAA domain (dynein-related subfamily)/AAA domain (Cdc48 subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16450|Pfam:PF07728|Pfam:PF07724|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_3 Pfam protein_match 203082 203246 . + . Parent=LTnewLM_030010300.1:pep;Name=PF16450;signature_desc=Proteasomal ATPase OB C-terminal domain LTnewLM_3 Pfam protein_match 203421 203777 . + . Parent=LTnewLM_030010300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_3 Pfam protein_match 203424 203720 . + . Parent=LTnewLM_030010300.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_3 Pfam protein_match 203424 203819 . + . Parent=LTnewLM_030010300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_3 Pfam protein_match 203886 204014 . + . Parent=LTnewLM_030010300.1:pep;Name=PF17862;signature_desc=AAA+ lid domain ### LTnewLM_3 AUGUSTUS gene 205465 209709 1 + . ID=LTnewLM_030010400 LTnewLM_3 AUGUSTUS mRNA 205465 209709 1 + . ID=LTnewLM_030010400.1;Parent=LTnewLM_030010400 LTnewLM_3 AUGUSTUS CDS 205465 209709 1 + 0 ID=LTnewLM_030010400.1:CDS:1;Parent=LTnewLM_030010400.1 ### LTnewLM_3 . polypeptide 205465 209709 . + . ID=LTnewLM_030010400.1:pep;Derives_from=LTnewLM_030010400.1;orthologous_to=LmjF.03.0550_mRNA;ortholog_cluster=OG0004014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 211226 213373 1 + . ID=LTnewLM_030010500 LTnewLM_3 AUGUSTUS mRNA 211226 213373 1 + . ID=LTnewLM_030010500.1;Parent=LTnewLM_030010500 LTnewLM_3 AUGUSTUS CDS 211226 213373 1 + 0 ID=LTnewLM_030010500.1:CDS:1;Parent=LTnewLM_030010500.1 ### LTnewLM_3 . polypeptide 211226 213373 . + . ID=LTnewLM_030010500.1:pep;Derives_from=LTnewLM_030010500.1;orthologous_to=LmjF.03.0560_mRNA;ortholog_cluster=OG0004015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 215125 215385 0.41 + . ID=LTnewLM_030010600 LTnewLM_3 AUGUSTUS mRNA 215125 215385 0.41 + . ID=LTnewLM_030010600.1;Parent=LTnewLM_030010600 LTnewLM_3 AUGUSTUS CDS 215125 215385 0.41 + 0 ID=LTnewLM_030010600.1:CDS:1;Parent=LTnewLM_030010600.1 ### LTnewLM_3 . polypeptide 215125 215385 . + . ID=LTnewLM_030010600.1:pep;Derives_from=LTnewLM_030010600.1;product=term%3Dhypothetical protein ### LTnewLM_3 AUGUSTUS gene 216266 217264 1 + . ID=LTnewLM_030010700 LTnewLM_3 AUGUSTUS mRNA 216266 217264 1 + . ID=LTnewLM_030010700.1;Parent=LTnewLM_030010700 LTnewLM_3 AUGUSTUS CDS 216266 217264 1 + 0 ID=LTnewLM_030010700.1:CDS:1;Parent=LTnewLM_030010700.1 ### LTnewLM_3 . polypeptide 216266 217264 . + . ID=LTnewLM_030010700.1:pep;Derives_from=LTnewLM_030010700.1;orthologous_to=LmjF.03.0570_mRNA;ortholog_cluster=OG0004016;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_3 Pfam protein_match 216356 216670 . + . Parent=LTnewLM_030010700.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_3 Pfam protein_match 216731 217036 . + . Parent=LTnewLM_030010700.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_3 Pfam protein_match 216836 217246 . + . Parent=LTnewLM_030010700.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase ### LTnewLM_3 AUGUSTUS gene 217656 218192 1 + . ID=LTnewLM_030010800 LTnewLM_3 AUGUSTUS mRNA 217656 218192 1 + . ID=LTnewLM_030010800.1;Parent=LTnewLM_030010800 LTnewLM_3 AUGUSTUS CDS 217656 218192 1 + 0 ID=LTnewLM_030010800.1:CDS:1;Parent=LTnewLM_030010800.1 ### LTnewLM_3 . polypeptide 217656 218192 . + . ID=LTnewLM_030010800.1:pep;Derives_from=LTnewLM_030010800.1;orthologous_to=LmjF.03.0580_mRNA;ortholog_cluster=OG0004017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 219724 224040 1 + . ID=LTnewLM_030010900 LTnewLM_3 AUGUSTUS mRNA 219724 224040 1 + . ID=LTnewLM_030010900.1;Parent=LTnewLM_030010900 LTnewLM_3 AUGUSTUS CDS 219724 224040 1 + 0 ID=LTnewLM_030010900.1:CDS:1;Parent=LTnewLM_030010900.1 ### LTnewLM_3 . polypeptide 219724 224040 . + . ID=LTnewLM_030010900.1:pep;Derives_from=LTnewLM_030010900.1;orthologous_to=LmjF.03.0590_mRNA;ortholog_cluster=OG0004018;product=term%3DDEAD_2/Helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06733|Pfam:PF13307;Ontology_term=GO:0006139,GO:0016818,GO:0005524,GO:0008026,GO:0004003,GO:0003676,GO:0003677 LTnewLM_3 Pfam protein_match 221233 221379 . + . Parent=LTnewLM_030010900.1:pep;Name=PF06733;signature_desc=DEAD_2;Ontology_term=GO:0003677,GO:0004003,GO:0005524 LTnewLM_3 Pfam protein_match 223174 223956 . + . Parent=LTnewLM_030010900.1:pep;Name=PF13307;signature_desc=Helicase C-terminal domain;Ontology_term=GO:0003676,GO:0005524,GO:0008026,GO:0016818,GO:0006139 ### LTnewLM_3 AUGUSTUS gene 224679 225896 1 + . ID=LTnewLM_030011000 LTnewLM_3 AUGUSTUS mRNA 224679 225896 1 + . ID=LTnewLM_030011000.1;Parent=LTnewLM_030011000 LTnewLM_3 AUGUSTUS CDS 224679 225896 1 + 0 ID=LTnewLM_030011000.1:CDS:1;Parent=LTnewLM_030011000.1 ### LTnewLM_3 . polypeptide 224679 225896 . + . ID=LTnewLM_030011000.1:pep;Derives_from=LTnewLM_030011000.1;orthologous_to=LmjF.03.0600_mRNA;ortholog_cluster=OG0004019;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13847|Pfam:PF13649 LTnewLM_3 Pfam protein_match 224913 225152 . + . Parent=LTnewLM_030011000.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_3 Pfam protein_match 224925 225143 . + . Parent=LTnewLM_030011000.1:pep;Name=PF13649;signature_desc=Methyltransferase domain ### LTnewLM_3 AUGUSTUS gene 227530 228579 1 + . ID=LTnewLM_030011100 LTnewLM_3 AUGUSTUS mRNA 227530 228579 1 + . ID=LTnewLM_030011100.1;Parent=LTnewLM_030011100 LTnewLM_3 AUGUSTUS CDS 227530 228579 1 + 0 ID=LTnewLM_030011100.1:CDS:1;Parent=LTnewLM_030011100.1 ### LTnewLM_3 . polypeptide 227530 228579 . + . ID=LTnewLM_030011100.1:pep;Derives_from=LTnewLM_030011100.1;orthologous_to=LmjF.03.0610_mRNA;ortholog_cluster=OG0004020;product=term%3DMethylmalonyl Co-A mutase-associated GTPase MeaB/CobW/HypB/UreG%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03308|Pfam:PF02492 LTnewLM_3 Pfam protein_match 227608 228420 . + . Parent=LTnewLM_030011100.1:pep;Name=PF03308;signature_desc=Methylmalonyl Co-A mutase-associated GTPase MeaB LTnewLM_3 Pfam protein_match 227719 228174 . + . Parent=LTnewLM_030011100.1:pep;Name=PF02492;signature_desc=CobW/HypB/UreG%2C nucleotide-binding domain ### LTnewLM_3 AUGUSTUS gene 229788 231815 1 + . ID=LTnewLM_030011200 LTnewLM_3 AUGUSTUS mRNA 229788 231815 1 + . ID=LTnewLM_030011200.1;Parent=LTnewLM_030011200 LTnewLM_3 AUGUSTUS CDS 229788 231815 1 + 0 ID=LTnewLM_030011200.1:CDS:1;Parent=LTnewLM_030011200.1 ### LTnewLM_3 . polypeptide 229788 231815 . + . ID=LTnewLM_030011200.1:pep;Derives_from=LTnewLM_030011200.1;orthologous_to=LmjF.03.0620_mRNA;ortholog_cluster=OG0004021;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 233439 234425 1 + . ID=LTnewLM_030011300 LTnewLM_3 AUGUSTUS mRNA 233439 234425 1 + . ID=LTnewLM_030011300.1;Parent=LTnewLM_030011300 LTnewLM_3 AUGUSTUS CDS 233439 234425 1 + 0 ID=LTnewLM_030011300.1:CDS:1;Parent=LTnewLM_030011300.1 ### LTnewLM_3 . polypeptide 233439 234425 . + . ID=LTnewLM_030011300.1:pep;Derives_from=LTnewLM_030011300.1;orthologous_to=LmjF.03.0630_mRNA;ortholog_cluster=OG0004022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 235245 237071 1 + . ID=LTnewLM_030011400 LTnewLM_3 AUGUSTUS mRNA 235245 237071 1 + . ID=LTnewLM_030011400.1;Parent=LTnewLM_030011400 LTnewLM_3 AUGUSTUS CDS 235245 237071 1 + 0 ID=LTnewLM_030011400.1:CDS:1;Parent=LTnewLM_030011400.1 ### LTnewLM_3 . polypeptide 235245 237071 . + . ID=LTnewLM_030011400.1:pep;Derives_from=LTnewLM_030011400.1;orthologous_to=LmjF.03.0640_mRNA;ortholog_cluster=OG0004023;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 239595 242273 1 + . ID=LTnewLM_030011500 LTnewLM_3 AUGUSTUS mRNA 239595 242273 1 + . ID=LTnewLM_030011500.1;Parent=LTnewLM_030011500 LTnewLM_3 AUGUSTUS CDS 239595 242273 1 + 0 ID=LTnewLM_030011500.1:CDS:1;Parent=LTnewLM_030011500.1 ### LTnewLM_3 . polypeptide 239595 242273 . + . ID=LTnewLM_030011500.1:pep;Derives_from=LTnewLM_030011500.1;orthologous_to=LmjF.03.0650_mRNA;ortholog_cluster=OG0004024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 243208 245607 1 + . ID=LTnewLM_030011600 LTnewLM_3 AUGUSTUS mRNA 243208 245607 1 + . ID=LTnewLM_030011600.1;Parent=LTnewLM_030011600 LTnewLM_3 AUGUSTUS CDS 243208 245607 1 + 0 ID=LTnewLM_030011600.1:CDS:1;Parent=LTnewLM_030011600.1 ### LTnewLM_3 . polypeptide 243208 245607 . + . ID=LTnewLM_030011600.1:pep;Derives_from=LTnewLM_030011600.1;orthologous_to=LmjF.03.0660_mRNA;ortholog_cluster=OG0004025;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 246519 248219 1 + . ID=LTnewLM_030011700 LTnewLM_3 AUGUSTUS mRNA 246519 248219 1 + . ID=LTnewLM_030011700.1;Parent=LTnewLM_030011700 LTnewLM_3 AUGUSTUS CDS 246519 248219 1 + 0 ID=LTnewLM_030011700.1:CDS:1;Parent=LTnewLM_030011700.1 ### LTnewLM_3 . polypeptide 246519 248219 . + . ID=LTnewLM_030011700.1:pep;Derives_from=LTnewLM_030011700.1;orthologous_to=LmjF.03.0670_mRNA;ortholog_cluster=OG0004026;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 257904 258764 1 + . ID=LTnewLM_030011800 LTnewLM_3 AUGUSTUS mRNA 257904 258764 1 + . ID=LTnewLM_030011800.1;Parent=LTnewLM_030011800 LTnewLM_3 AUGUSTUS CDS 257904 258764 1 + 0 ID=LTnewLM_030011800.1:CDS:1;Parent=LTnewLM_030011800.1 ### LTnewLM_3 . polypeptide 257904 258764 . + . ID=LTnewLM_030011800.1:pep;Derives_from=LTnewLM_030011800.1;orthologous_to=LmjF.03.0680_mRNA;ortholog_cluster=OG0004027;product=term%3DUroporphyrinogen-III synthase HemD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02602;Ontology_term=GO:0033014,GO:0004852 LTnewLM_3 Pfam protein_match 257949 258725 . + . Parent=LTnewLM_030011800.1:pep;Name=PF02602;signature_desc=Uroporphyrinogen-III synthase HemD;Ontology_term=GO:0004852,GO:0033014 ### LTnewLM_3 Aragorn_1.2.36 gene 260172 260244 . + . ID=LTnewLM_030011900 LTnewLM_3 Aragorn_1.2.36 tRNA 260172 260244 . + . ID=LTnewLM_030011900:tRNA;Parent=LTnewLM_030011900;aa=Lys;anticodon=ctt;gc_content=61.6 ### LTnewLM_3 AUGUSTUS gene 261042 267674 1 - . ID=LTnewLM_030012000 LTnewLM_3 AUGUSTUS mRNA 261042 267674 1 - . ID=LTnewLM_030012000.1;Parent=LTnewLM_030012000 LTnewLM_3 AUGUSTUS CDS 261042 267674 1 - 0 ID=LTnewLM_030012000.1:CDS:1;Parent=LTnewLM_030012000.1 ### LTnewLM_3 . polypeptide 261042 267674 . - . ID=LTnewLM_030012000.1:pep;Derives_from=LTnewLM_030012000.1;orthologous_to=LmjF.03.0690_mRNA;ortholog_cluster=OG0004028;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_3 Pfam protein_match 263955 264428 . - . Parent=LTnewLM_030012000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_3 Pfam protein_match 263961 264398 . - . Parent=LTnewLM_030012000.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_3 AUGUSTUS gene 268469 277006 1 - . ID=LTnewLM_030012100 LTnewLM_3 AUGUSTUS mRNA 268469 277006 1 - . ID=LTnewLM_030012100.1;Parent=LTnewLM_030012100 LTnewLM_3 AUGUSTUS CDS 268469 277006 1 - 0 ID=LTnewLM_030012100.1:CDS:1;Parent=LTnewLM_030012100.1 ### LTnewLM_3 . polypeptide 268469 277006 . - . ID=LTnewLM_030012100.1:pep;Derives_from=LTnewLM_030012100.1;orthologous_to=LmjF.03.0700_mRNA;ortholog_cluster=OG0004029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 277796 278482 1 - . ID=LTnewLM_030012200 LTnewLM_3 AUGUSTUS mRNA 277796 278482 1 - . ID=LTnewLM_030012200.1;Parent=LTnewLM_030012200 LTnewLM_3 AUGUSTUS CDS 277796 278482 1 - 0 ID=LTnewLM_030012200.1:CDS:1;Parent=LTnewLM_030012200.1 ### LTnewLM_3 . polypeptide 277796 278482 . - . ID=LTnewLM_030012200.1:pep;Derives_from=LTnewLM_030012200.1;orthologous_to=LmjF.03.0710_mRNA;ortholog_cluster=OG0004030;product=term%3DAminoacyl-tRNA editing domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04073;Ontology_term=GO:0002161 LTnewLM_3 Pfam protein_match 277916 278185 . - . Parent=LTnewLM_030012200.1:pep;Name=PF04073;signature_desc=Aminoacyl-tRNA editing domain;Ontology_term=GO:0002161 ### LTnewLM_3 . polypeptide 279040 281427 . - . ID=LTnewLM_030012300.1:pep;Derives_from=LTnewLM_030012300.1;orthologous_to=LTnewLM_030012300.2,LmjF.03.0720_mRNA;ortholog_cluster=OG0000426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 279040 282339 1.69 - . ID=LTnewLM_030012300 LTnewLM_3 AUGUSTUS mRNA 279040 281427 0.69 - . ID=LTnewLM_030012300.1;Parent=LTnewLM_030012300 LTnewLM_3 AUGUSTUS CDS 279040 281427 0.69 - 0 ID=LTnewLM_030012300.1:CDS:1;Parent=LTnewLM_030012300.1 LTnewLM_3 AUGUSTUS mRNA 279040 282339 1 - . ID=LTnewLM_030012300.2;Parent=LTnewLM_030012300 LTnewLM_3 AUGUSTUS CDS 279040 282339 1 - 0 ID=LTnewLM_030012300.2:CDS:1;Parent=LTnewLM_030012300.2 ### LTnewLM_3 . polypeptide 279040 282339 . - . ID=LTnewLM_030012300.2:pep;Derives_from=LTnewLM_030012300.2;orthologous_to=LTnewLM_030012300.1,LmjF.03.0720_mRNA;ortholog_cluster=OG0000426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 283924 285138 1 - . ID=LTnewLM_030012400 LTnewLM_3 AUGUSTUS mRNA 283924 285138 1 - . ID=LTnewLM_030012400.1;Parent=LTnewLM_030012400 LTnewLM_3 AUGUSTUS CDS 283924 285138 1 - 0 ID=LTnewLM_030012400.1:CDS:1;Parent=LTnewLM_030012400.1 ### LTnewLM_3 . polypeptide 283924 285138 . - . ID=LTnewLM_030012400.1:pep;Derives_from=LTnewLM_030012400.1;orthologous_to=LmjF.03.0730_mRNA;ortholog_cluster=OG0004031;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 286036 286290 1 - . ID=LTnewLM_030012500 LTnewLM_3 AUGUSTUS mRNA 286036 286290 1 - . ID=LTnewLM_030012500.1;Parent=LTnewLM_030012500 LTnewLM_3 AUGUSTUS CDS 286036 286290 1 - 0 ID=LTnewLM_030012500.1:CDS:1;Parent=LTnewLM_030012500.1 ### LTnewLM_3 . polypeptide 286036 286290 . - . ID=LTnewLM_030012500.1:pep;Derives_from=LTnewLM_030012500.1;orthologous_to=LmjF.03.0740_mRNA;ortholog_cluster=OG0004032;product=term%3DCytochrome C oxidase copper chaperone (COX17)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05051;Ontology_term=GO:0016531,GO:0005758,GO:0005507,GO:0006825 LTnewLM_3 Pfam protein_match 286084 286212 . - . Parent=LTnewLM_030012500.1:pep;Name=PF05051;signature_desc=Cytochrome C oxidase copper chaperone (COX17);Ontology_term=GO:0005507,GO:0016531,GO:0006825,GO:0005758 ### LTnewLM_3 AUGUSTUS gene 286968 289259 1 - . ID=LTnewLM_030012600 LTnewLM_3 AUGUSTUS mRNA 286968 289259 1 - . ID=LTnewLM_030012600.1;Parent=LTnewLM_030012600 LTnewLM_3 AUGUSTUS CDS 286968 289259 1 - 0 ID=LTnewLM_030012600.1:CDS:1;Parent=LTnewLM_030012600.1 ### LTnewLM_3 . polypeptide 286968 289259 . - . ID=LTnewLM_030012600.1:pep;Derives_from=LTnewLM_030012600.1;orthologous_to=LmjF.03.0750_mRNA;ortholog_cluster=OG0004033;product=term%3DTatD related DNase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01026;Ontology_term=GO:0016888 LTnewLM_3 Pfam protein_match 287790 288959 . - . Parent=LTnewLM_030012600.1:pep;Name=PF01026;signature_desc=TatD related DNase;Ontology_term=GO:0016888 ### LTnewLM_3 AUGUSTUS gene 290096 291049 1 - . ID=LTnewLM_030012700 LTnewLM_3 AUGUSTUS mRNA 290096 291049 1 - . ID=LTnewLM_030012700.1;Parent=LTnewLM_030012700 LTnewLM_3 AUGUSTUS CDS 290096 291049 1 - 0 ID=LTnewLM_030012700.1:CDS:1;Parent=LTnewLM_030012700.1 ### LTnewLM_3 . polypeptide 290096 291049 . - . ID=LTnewLM_030012700.1:pep;Derives_from=LTnewLM_030012700.1;orthologous_to=LmjF.03.0760_mRNA;ortholog_cluster=OG0004034;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 291798 293444 1 - . ID=LTnewLM_030012800 LTnewLM_3 AUGUSTUS mRNA 291798 293444 1 - . ID=LTnewLM_030012800.1;Parent=LTnewLM_030012800 LTnewLM_3 AUGUSTUS CDS 291798 293444 1 - 0 ID=LTnewLM_030012800.1:CDS:1;Parent=LTnewLM_030012800.1 ### LTnewLM_3 . polypeptide 291798 293444 . - . ID=LTnewLM_030012800.1:pep;Derives_from=LTnewLM_030012800.1;orthologous_to=LmjF.03.0770_mRNA;ortholog_cluster=OG0004035;product=term%3DUbiquitin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14560;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 291810 292043 . - . Parent=LTnewLM_030012800.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_3 AUGUSTUS gene 294319 303462 1 - . ID=LTnewLM_030012900 LTnewLM_3 AUGUSTUS mRNA 294319 303462 1 - . ID=LTnewLM_030012900.1;Parent=LTnewLM_030012900 LTnewLM_3 AUGUSTUS CDS 294319 303462 1 - 0 ID=LTnewLM_030012900.1:CDS:1;Parent=LTnewLM_030012900.1 ### LTnewLM_3 . polypeptide 294319 303462 . - . ID=LTnewLM_030012900.1:pep;Derives_from=LTnewLM_030012900.1;orthologous_to=LmjF.03.0780_mRNA;ortholog_cluster=OG0004036;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_3 Pfam protein_match 300139 300579 . - . Parent=LTnewLM_030012900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_3 Pfam protein_match 300421 300564 . - . Parent=LTnewLM_030012900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_3 Pfam protein_match 302374 302643 . - . Parent=LTnewLM_030012900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_3 Pfam protein_match 302374 302649 . - . Parent=LTnewLM_030012900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_3 AUGUSTUS gene 305146 306453 1 - . ID=LTnewLM_030013000 LTnewLM_3 AUGUSTUS mRNA 305146 306453 1 - . ID=LTnewLM_030013000.1;Parent=LTnewLM_030013000 LTnewLM_3 AUGUSTUS CDS 305146 306453 1 - 0 ID=LTnewLM_030013000.1:CDS:1;Parent=LTnewLM_030013000.1 ### LTnewLM_3 . polypeptide 305146 306453 . - . ID=LTnewLM_030013000.1:pep;Derives_from=LTnewLM_030013000.1;orthologous_to=LmjF.03.0790_mRNA;ortholog_cluster=OG0004037;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 Liftoff gene 307311 314618 . - . ID=LTnewLM_030013100;coverage=0.996;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.03.0800_0 LTnewLM_3 Liftoff mRNA 307311 314618 . - . ID=LTnewLM_030013100.1;Parent=LTnewLM_030013100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_3 Liftoff CDS 307311 314618 . - 0 ID=LTnewLM_030013100.1:CDS:1;Parent=LTnewLM_030013100.1;extra_copy_number=0 ### LTnewLM_3 . polypeptide 307311 314618 . - . ID=LTnewLM_030013100.1:pep;Derives_from=LTnewLM_030013100.1;orthologous_to=LmjF.03.0800_mRNA;ortholog_cluster=OG0004038;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat/6-phosphofructo-2-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13857|Pfam:PF00023|Pfam:PF13637|Pfam:PF01591;Ontology_term=GO:0006000,GO:0005515,GO:0005524,GO:0003873 LTnewLM_3 Pfam protein_match 308655 309308 . - . Parent=LTnewLM_030013100.1:pep;Name=PF01591;signature_desc=6-phosphofructo-2-kinase;Ontology_term=GO:0003873,GO:0005524,GO:0006000 LTnewLM_3 Pfam protein_match 311682 311834 . - . Parent=LTnewLM_030013100.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 311682 311897 . - . Parent=LTnewLM_030013100.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_3 Pfam protein_match 311724 311885 . - . Parent=LTnewLM_030013100.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_3 Pfam protein_match 311748 311843 . - . Parent=LTnewLM_030013100.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_3 AUGUSTUS gene 315747 318917 1 - . ID=LTnewLM_030013200 LTnewLM_3 AUGUSTUS mRNA 315747 318917 1 - . ID=LTnewLM_030013200.1;Parent=LTnewLM_030013200 LTnewLM_3 AUGUSTUS CDS 315747 318917 1 - 0 ID=LTnewLM_030013200.1:CDS:1;Parent=LTnewLM_030013200.1 ### LTnewLM_3 . polypeptide 315747 318917 . - . ID=LTnewLM_030013200.1:pep;Derives_from=LTnewLM_030013200.1;orthologous_to=LmjF.03.0810_mRNA;ortholog_cluster=OG0004039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 . pseudogene 319632 328393 1.44e+04 - . ID=LTnewLM_030013300:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.03.0820:mRNA 1 2931;original_prot_length=2937 LTnewLM_3 . pseudogenic_transcript 319632 328393 . - . ID=LTnewLM_030013300.1;Parent=LTnewLM_030013300:pseudogene LTnewLM_3 . pseudogenic_exon 319632 327602 . - . ID=LTnewLM_030013300.1:pseudogenic_exon:1;Parent=LTnewLM_030013300.1 LTnewLM_3 . pseudogenic_exon 327604 327678 . - . ID=LTnewLM_030013300.1:pseudogenic_exon:2;Parent=LTnewLM_030013300.1 LTnewLM_3 . pseudogenic_exon 327680 328393 . - . ID=LTnewLM_030013300.1:pseudogenic_exon:3;Parent=LTnewLM_030013300.1 ### LTnewLM_3 . polypeptide 319632 328393 . - . ID=LTnewLM_030013300.1:pep;Derives_from=LTnewLM_030013300.1;orthologous_to=LmjF.03.0820_mRNA;ortholog_cluster=OG0007587;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 329432 331288 1 - . ID=LTnewLM_030013400 LTnewLM_3 AUGUSTUS mRNA 329432 331288 1 - . ID=LTnewLM_030013400.1;Parent=LTnewLM_030013400 LTnewLM_3 AUGUSTUS CDS 329432 331288 1 - 0 ID=LTnewLM_030013400.1:CDS:1;Parent=LTnewLM_030013400.1 ### LTnewLM_3 . polypeptide 329432 331288 . - . ID=LTnewLM_030013400.1:pep;Derives_from=LTnewLM_030013400.1;orthologous_to=LTnewLM_360071200.1,LmjF.36.5900_mRNA;ortholog_cluster=OG0000427;product=term%3DCDP-alcohol phosphatidyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01066;Ontology_term=GO:0008654,GO:0016020,GO:0016780 LTnewLM_3 Pfam protein_match 330722 330976 . - . Parent=LTnewLM_030013400.1:pep;Name=PF01066;signature_desc=CDP-alcohol phosphatidyltransferase;Ontology_term=GO:0016780,GO:0008654,GO:0016020 ### LTnewLM_3 AUGUSTUS gene 333621 334808 1 - . ID=LTnewLM_030013500 LTnewLM_3 AUGUSTUS mRNA 333621 334808 1 - . ID=LTnewLM_030013500.1;Parent=LTnewLM_030013500 LTnewLM_3 AUGUSTUS CDS 333621 334808 1 - 0 ID=LTnewLM_030013500.1:CDS:1;Parent=LTnewLM_030013500.1 ### LTnewLM_3 . polypeptide 333621 334808 . - . ID=LTnewLM_030013500.1:pep;Derives_from=LTnewLM_030013500.1;orthologous_to=LmjF.03.0830_mRNA;ortholog_cluster=OG0004040;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 335881 338790 1 - . ID=LTnewLM_030013600 LTnewLM_3 AUGUSTUS mRNA 335881 338790 1 - . ID=LTnewLM_030013600.1;Parent=LTnewLM_030013600 LTnewLM_3 AUGUSTUS CDS 335881 338790 1 - 0 ID=LTnewLM_030013600.1:CDS:1;Parent=LTnewLM_030013600.1 ### LTnewLM_3 . polypeptide 335881 338790 . - . ID=LTnewLM_030013600.1:pep;Derives_from=LTnewLM_030013600.1;orthologous_to=LmjF.03.0840_mRNA;ortholog_cluster=OG0004041;product=term%3Dzf-MYND-like zinc finger%2C mRNA-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15801 LTnewLM_3 Pfam protein_match 338620 338754 . - . Parent=LTnewLM_030013600.1:pep;Name=PF15801;signature_desc=zf-MYND-like zinc finger%2C mRNA-binding ### LTnewLM_3 AUGUSTUS gene 339564 346682 1 - . ID=LTnewLM_030013700 LTnewLM_3 AUGUSTUS mRNA 339564 346682 1 - . ID=LTnewLM_030013700.1;Parent=LTnewLM_030013700 LTnewLM_3 AUGUSTUS CDS 339564 346682 1 - 0 ID=LTnewLM_030013700.1:CDS:1;Parent=LTnewLM_030013700.1 ### LTnewLM_3 . polypeptide 339564 346682 . - . ID=LTnewLM_030013700.1:pep;Derives_from=LTnewLM_030013700.1;orthologous_to=LmjF.03.0850_mRNA;ortholog_cluster=OG0004042;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 347714 352339 1 - . ID=LTnewLM_030013800 LTnewLM_3 AUGUSTUS mRNA 347714 352339 1 - . ID=LTnewLM_030013800.1;Parent=LTnewLM_030013800 LTnewLM_3 AUGUSTUS CDS 347714 352339 1 - 0 ID=LTnewLM_030013800.1:CDS:1;Parent=LTnewLM_030013800.1 ### LTnewLM_3 . polypeptide 347714 352339 . - . ID=LTnewLM_030013800.1:pep;Derives_from=LTnewLM_030013800.1;orthologous_to=LmjF.03.0860_mRNA;ortholog_cluster=OG0004043;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 353068 357228 1 - . ID=LTnewLM_030013900 LTnewLM_3 AUGUSTUS mRNA 353068 357228 1 - . ID=LTnewLM_030013900.1;Parent=LTnewLM_030013900 LTnewLM_3 AUGUSTUS CDS 353068 357228 1 - 0 ID=LTnewLM_030013900.1:CDS:1;Parent=LTnewLM_030013900.1 ### LTnewLM_3 . polypeptide 353068 357228 . - . ID=LTnewLM_030013900.1:pep;Derives_from=LTnewLM_030013900.1;orthologous_to=LmjF.03.0870_mRNA;ortholog_cluster=OG0004044;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 . polypeptide 358127 361636 . - . ID=LTnewLM_030014000.1:pep;Derives_from=LTnewLM_030014000.1;orthologous_to=LTnewLM_030014000.2,LmjF.03.0880_mRNA;ortholog_cluster=OG0000428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 358127 364132 1.86 - . ID=LTnewLM_030014000 LTnewLM_3 AUGUSTUS mRNA 358127 361636 0.86 - . ID=LTnewLM_030014000.1;Parent=LTnewLM_030014000 LTnewLM_3 AUGUSTUS CDS 358127 361636 0.86 - 0 ID=LTnewLM_030014000.1:CDS:1;Parent=LTnewLM_030014000.1 LTnewLM_3 AUGUSTUS mRNA 358127 364132 1 - . ID=LTnewLM_030014000.2;Parent=LTnewLM_030014000 LTnewLM_3 AUGUSTUS CDS 358127 364132 1 - 0 ID=LTnewLM_030014000.2:CDS:1;Parent=LTnewLM_030014000.2 ### LTnewLM_3 . polypeptide 358127 364132 . - . ID=LTnewLM_030014000.2:pep;Derives_from=LTnewLM_030014000.2;orthologous_to=LTnewLM_030014000.1,LmjF.03.0880_mRNA;ortholog_cluster=OG0000428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 364884 367104 0.72 - . ID=LTnewLM_030014100 LTnewLM_3 AUGUSTUS mRNA 364884 367104 0.72 - . ID=LTnewLM_030014100.1;Parent=LTnewLM_030014100 LTnewLM_3 AUGUSTUS CDS 364884 365807 0.72 - 0 ID=LTnewLM_030014100.1:CDS:1;Parent=LTnewLM_030014100.1 LTnewLM_3 AUGUSTUS CDS 365887 367104 0.72 - 0 ID=LTnewLM_030014100.1:CDS:2;Parent=LTnewLM_030014100.1 ### LTnewLM_3 . polypeptide 364884 367104 . - . ID=LTnewLM_030014100.1:pep;Derives_from=LTnewLM_030014100.1;orthologous_to=LmjF.03.0890_mRNA;ortholog_cluster=OG0004045;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 365368 365490 . - . Parent=LTnewLM_030014100.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 LTnewLM_3 Pfam protein_match 365896 366174 . - . Parent=LTnewLM_030014100.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_3 AUGUSTUS gene 369315 370439 1 - . ID=LTnewLM_030014200 LTnewLM_3 AUGUSTUS mRNA 369315 370439 1 - . ID=LTnewLM_030014200.1;Parent=LTnewLM_030014200 LTnewLM_3 AUGUSTUS CDS 369315 370439 1 - 0 ID=LTnewLM_030014200.1:CDS:1;Parent=LTnewLM_030014200.1 ### LTnewLM_3 . polypeptide 369315 370439 . - . ID=LTnewLM_030014200.1:pep;Derives_from=LTnewLM_030014200.1;orthologous_to=LmjF.03.0900_mRNA;ortholog_cluster=OG0004046;product=term%3DBrix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04427 LTnewLM_3 Pfam protein_match 369609 370328 . - . Parent=LTnewLM_030014200.1:pep;Name=PF04427;signature_desc=Brix domain ### LTnewLM_3 AUGUSTUS gene 371587 372378 1 - . ID=LTnewLM_030014300 LTnewLM_3 AUGUSTUS mRNA 371587 372378 1 - . ID=LTnewLM_030014300.1;Parent=LTnewLM_030014300 LTnewLM_3 AUGUSTUS CDS 371587 372378 1 - 0 ID=LTnewLM_030014300.1:CDS:1;Parent=LTnewLM_030014300.1 ### LTnewLM_3 . polypeptide 371587 372378 . - . ID=LTnewLM_030014300.1:pep;Derives_from=LTnewLM_030014300.1;orthologous_to=LmjF.03.0910_mRNA;ortholog_cluster=OG0004047;product=term%3DInorganic pyrophosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00719;Ontology_term=GO:0006796,GO:0000287,GO:0005737,GO:0004427 LTnewLM_3 Pfam protein_match 371641 372171 . - . Parent=LTnewLM_030014300.1:pep;Name=PF00719;signature_desc=Inorganic pyrophosphatase;Ontology_term=GO:0000287,GO:0004427,GO:0006796,GO:0005737 ### LTnewLM_3 AUGUSTUS gene 373113 373769 1 - . ID=LTnewLM_030014400 LTnewLM_3 AUGUSTUS mRNA 373113 373769 1 - . ID=LTnewLM_030014400.1;Parent=LTnewLM_030014400 LTnewLM_3 AUGUSTUS CDS 373113 373769 1 - 0 ID=LTnewLM_030014400.1:CDS:1;Parent=LTnewLM_030014400.1 ### LTnewLM_3 . polypeptide 373113 373769 . - . ID=LTnewLM_030014400.1:pep;Derives_from=LTnewLM_030014400.1;orthologous_to=LmjF.03.0920_mRNA;ortholog_cluster=OG0004048;product=term%3DGot1/Sft2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04178;Ontology_term=GO:0016192 LTnewLM_3 Pfam protein_match 373230 373550 . - . Parent=LTnewLM_030014400.1:pep;Name=PF04178;signature_desc=Got1/Sft2-like family;Ontology_term=GO:0016192 ### LTnewLM_3 AUGUSTUS gene 374834 376927 1 - . ID=LTnewLM_030014500 LTnewLM_3 AUGUSTUS mRNA 374834 376927 1 - . ID=LTnewLM_030014500.1;Parent=LTnewLM_030014500 LTnewLM_3 AUGUSTUS CDS 374834 376927 1 - 0 ID=LTnewLM_030014500.1:CDS:1;Parent=LTnewLM_030014500.1 ### LTnewLM_3 . polypeptide 374834 376927 . - . ID=LTnewLM_030014500.1:pep;Derives_from=LTnewLM_030014500.1;orthologous_to=LmjF.03.0930_mRNA;ortholog_cluster=OG0004049;product=term%3DAmidohydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07969|Pfam:PF01979;Ontology_term=GO:0016787 LTnewLM_3 Pfam protein_match 374858 376672 . - . Parent=LTnewLM_030014500.1:pep;Name=PF07969;signature_desc=Amidohydrolase family LTnewLM_3 Pfam protein_match 374969 376183 . - . Parent=LTnewLM_030014500.1:pep;Name=PF01979;signature_desc=Amidohydrolase family;Ontology_term=GO:0016787 ### LTnewLM_3 AUGUSTUS gene 377524 378510 1 - . ID=LTnewLM_030014600 LTnewLM_3 AUGUSTUS mRNA 377524 378510 1 - . ID=LTnewLM_030014600.1;Parent=LTnewLM_030014600 LTnewLM_3 AUGUSTUS CDS 377524 378510 1 - 0 ID=LTnewLM_030014600.1:CDS:1;Parent=LTnewLM_030014600.1 ### LTnewLM_3 . polypeptide 377524 378510 . - . ID=LTnewLM_030014600.1:pep;Derives_from=LTnewLM_030014600.1;orthologous_to=LmjF.03.0940_mRNA;ortholog_cluster=OG0004050;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 380000 381907 1 - . ID=LTnewLM_030014700 LTnewLM_3 AUGUSTUS mRNA 380000 381907 1 - . ID=LTnewLM_030014700.1;Parent=LTnewLM_030014700 LTnewLM_3 AUGUSTUS CDS 380000 381907 1 - 0 ID=LTnewLM_030014700.1:CDS:1;Parent=LTnewLM_030014700.1 ### LTnewLM_3 . polypeptide 380000 381907 . - . ID=LTnewLM_030014700.1:pep;Derives_from=LTnewLM_030014700.1;orthologous_to=LmjF.03.0950_mRNA;ortholog_cluster=OG0004051;product=term%3DMulticopper oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07732|Pfam:PF07731;Ontology_term=GO:0005507,GO:0016491,GO:0055114 LTnewLM_3 Pfam protein_match 380264 380662 . - . Parent=LTnewLM_030014700.1:pep;Name=PF07731;signature_desc=Multicopper oxidase;Ontology_term=GO:0005507,GO:0016491,GO:0055114 LTnewLM_3 Pfam protein_match 381347 381670 . - . Parent=LTnewLM_030014700.1:pep;Name=PF07732;signature_desc=Multicopper oxidase;Ontology_term=GO:0005507 ### LTnewLM_3 AUGUSTUS gene 382526 382840 1 - . ID=LTnewLM_030014800 LTnewLM_3 AUGUSTUS mRNA 382526 382840 1 - . ID=LTnewLM_030014800.1;Parent=LTnewLM_030014800 LTnewLM_3 AUGUSTUS CDS 382526 382840 1 - 0 ID=LTnewLM_030014800.1:CDS:1;Parent=LTnewLM_030014800.1 ### LTnewLM_3 . polypeptide 382526 382840 . - . ID=LTnewLM_030014800.1:pep;Derives_from=LTnewLM_030014800.1;orthologous_to=LmjF.03.0960_mRNA;ortholog_cluster=OG0004052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_3 AUGUSTUS gene 383379 384443 1 - . ID=LTnewLM_030014900 LTnewLM_3 AUGUSTUS mRNA 383379 384443 1 - . ID=LTnewLM_030014900.1;Parent=LTnewLM_030014900 LTnewLM_3 AUGUSTUS CDS 383379 384443 1 - 0 ID=LTnewLM_030014900.1:CDS:1;Parent=LTnewLM_030014900.1 ### LTnewLM_3 . polypeptide 383379 384443 . - . ID=LTnewLM_030014900.1:pep;Derives_from=LTnewLM_030014900.1;orthologous_to=LmjF.03.0970_mRNA;ortholog_cluster=OG0004053;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_3 Pfam protein_match 383625 383687 . - . Parent=LTnewLM_030014900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_3 Pfam protein_match 383691 383756 . - . Parent=LTnewLM_030014900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_3 Pfam protein_match 383763 383825 . - . Parent=LTnewLM_030014900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_3 Pfam protein_match 383982 384044 . - . Parent=LTnewLM_030014900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_3 Pfam protein_match 384048 384089 . - . Parent=LTnewLM_030014900.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_3 AUGUSTUS gene 385084 386325 1 - . ID=LTnewLM_030015000 LTnewLM_3 AUGUSTUS mRNA 385084 386325 1 - . ID=LTnewLM_030015000.1;Parent=LTnewLM_030015000 LTnewLM_3 AUGUSTUS CDS 385084 386325 1 - 0 ID=LTnewLM_030015000.1:CDS:1;Parent=LTnewLM_030015000.1 ### LTnewLM_3 . polypeptide 385084 386325 . - . ID=LTnewLM_030015000.1:pep;Derives_from=LTnewLM_030015000.1;orthologous_to=LmjF.03.0980_mRNA;ortholog_cluster=OG0004054;product=term%3DS1 RNA binding domain/Eukaryotic translation initiation factor 2 alpha subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00575|Pfam:PF07541;Ontology_term=GO:0003723,GO:0005850,GO:0003676,GO:0003743 LTnewLM_3 Pfam protein_match 385261 385605 . - . Parent=LTnewLM_030015000.1:pep;Name=PF07541;signature_desc=Eukaryotic translation initiation factor 2 alpha subunit;Ontology_term=GO:0003723,GO:0003743,GO:0005850 LTnewLM_3 Pfam protein_match 385723 385944 . - . Parent=LTnewLM_030015000.1:pep;Name=PF00575;signature_desc=S1 RNA binding domain;Ontology_term=GO:0003676 ### LTnewLM_30 . contig 1 1384498 . + . Name=LTnewLM_CTG000031 LTnewLM_30 AUGUSTUS gene 3574 3984 1 - . ID=LTnewLM_300005000 LTnewLM_30 AUGUSTUS mRNA 3574 3984 1 - . ID=LTnewLM_300005000.1;Parent=LTnewLM_300005000 LTnewLM_30 AUGUSTUS CDS 3574 3984 1 - 0 ID=LTnewLM_300005000.1:CDS:1;Parent=LTnewLM_300005000.1 ### LTnewLM_30 . polypeptide 3574 3984 . - . ID=LTnewLM_300005000.1:pep;Derives_from=LTnewLM_300005000.1;orthologous_to=LTnewLM_310023000.1,LTnewLM_310023200.1;ortholog_cluster=OG0000429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 7918 9195 1 - . ID=LTnewLM_300005100 LTnewLM_30 AUGUSTUS mRNA 7918 9195 1 - . ID=LTnewLM_300005100.1;Parent=LTnewLM_300005100 LTnewLM_30 AUGUSTUS CDS 7918 9195 1 - 0 ID=LTnewLM_300005100.1:CDS:1;Parent=LTnewLM_300005100.1 ### LTnewLM_30 . polypeptide 7918 9195 . - . ID=LTnewLM_300005100.1:pep;Derives_from=LTnewLM_300005100.1;orthologous_to=LmjF.30.0010_mRNA;ortholog_cluster=OG0004055;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561|Pfam:PF12697 LTnewLM_30 Pfam protein_match 8011 8799 . - . Parent=LTnewLM_300005100.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_30 Pfam protein_match 8011 8808 . - . Parent=LTnewLM_300005100.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_30 Pfam protein_match 8023 8817 . - . Parent=LTnewLM_300005100.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 ### LTnewLM_30 AUGUSTUS gene 9956 10693 1 - . ID=LTnewLM_300005200 LTnewLM_30 AUGUSTUS mRNA 9956 10693 1 - . ID=LTnewLM_300005200.1;Parent=LTnewLM_300005200 LTnewLM_30 AUGUSTUS CDS 9956 10693 1 - 0 ID=LTnewLM_300005200.1:CDS:1;Parent=LTnewLM_300005200.1 ### LTnewLM_30 . polypeptide 9956 10693 . - . ID=LTnewLM_300005200.1:pep;Derives_from=LTnewLM_300005200.1;orthologous_to=LmjF.30.0020_mRNA;ortholog_cluster=OG0004056;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_30 Pfam protein_match 10052 10522 . - . Parent=LTnewLM_300005200.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_30 AUGUSTUS gene 11437 12153 1 - . ID=LTnewLM_300005300 LTnewLM_30 AUGUSTUS mRNA 11437 12153 1 - . ID=LTnewLM_300005300.1;Parent=LTnewLM_300005300 LTnewLM_30 AUGUSTUS CDS 11437 12153 1 - 0 ID=LTnewLM_300005300.1:CDS:1;Parent=LTnewLM_300005300.1 ### LTnewLM_30 . polypeptide 11437 12153 . - . ID=LTnewLM_300005300.1:pep;Derives_from=LTnewLM_300005300.1;orthologous_to=LmjF.30.0030_mRNA;ortholog_cluster=OG0004057;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 13192 13617 1 - . ID=LTnewLM_300005400 LTnewLM_30 AUGUSTUS mRNA 13192 13617 1 - . ID=LTnewLM_300005400.1;Parent=LTnewLM_300005400 LTnewLM_30 AUGUSTUS CDS 13192 13617 1 - 0 ID=LTnewLM_300005400.1:CDS:1;Parent=LTnewLM_300005400.1 ### LTnewLM_30 . polypeptide 13192 13617 . - . ID=LTnewLM_300005400.1:pep;Derives_from=LTnewLM_300005400.1;orthologous_to=LmjF.30.0040_mRNA;ortholog_cluster=OG0004058;product=term%3DUncharacterised protein family (UPF0220)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05255 LTnewLM_30 Pfam protein_match 13210 13587 . - . Parent=LTnewLM_300005400.1:pep;Name=PF05255;signature_desc=Uncharacterised protein family (UPF0220) ### LTnewLM_30 AUGUSTUS gene 14688 16976 1 - . ID=LTnewLM_300005500 LTnewLM_30 AUGUSTUS mRNA 14688 16976 1 - . ID=LTnewLM_300005500.1;Parent=LTnewLM_300005500 LTnewLM_30 AUGUSTUS CDS 14688 16976 1 - 0 ID=LTnewLM_300005500.1:CDS:1;Parent=LTnewLM_300005500.1 ### LTnewLM_30 . polypeptide 14688 16976 . - . ID=LTnewLM_300005500.1:pep;Derives_from=LTnewLM_300005500.1;orthologous_to=LmjF.30.0050_mRNA;ortholog_cluster=OG0004059;product=term%3DMATH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00917;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 15363 15701 . - . Parent=LTnewLM_300005500.1:pep;Name=PF00917;signature_desc=MATH domain;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 18207 18929 1 - . ID=LTnewLM_300005600 LTnewLM_30 AUGUSTUS mRNA 18207 18929 1 - . ID=LTnewLM_300005600.1;Parent=LTnewLM_300005600 LTnewLM_30 AUGUSTUS CDS 18207 18929 1 - 0 ID=LTnewLM_300005600.1:CDS:1;Parent=LTnewLM_300005600.1 ### LTnewLM_30 . polypeptide 18207 18929 . - . ID=LTnewLM_300005600.1:pep;Derives_from=LTnewLM_300005600.1;orthologous_to=LmjF.30.0060_mRNA;ortholog_cluster=OG0004060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 19947 20831 1 - . ID=LTnewLM_300005700 LTnewLM_30 AUGUSTUS mRNA 19947 20831 1 - . ID=LTnewLM_300005700.1;Parent=LTnewLM_300005700 LTnewLM_30 AUGUSTUS CDS 19947 20831 1 - 0 ID=LTnewLM_300005700.1:CDS:1;Parent=LTnewLM_300005700.1 ### LTnewLM_30 . polypeptide 19947 20831 . - . ID=LTnewLM_300005700.1:pep;Derives_from=LTnewLM_300005700.1;orthologous_to=LmjF.30.0070_mRNA;ortholog_cluster=OG0004061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 21498 22760 1 - . ID=LTnewLM_300005800 LTnewLM_30 AUGUSTUS mRNA 21498 22760 1 - . ID=LTnewLM_300005800.1;Parent=LTnewLM_300005800 LTnewLM_30 AUGUSTUS CDS 21498 22760 1 - 0 ID=LTnewLM_300005800.1:CDS:1;Parent=LTnewLM_300005800.1 ### LTnewLM_30 . polypeptide 21498 22760 . - . ID=LTnewLM_300005800.1:pep;Derives_from=LTnewLM_300005800.1;orthologous_to=LmjF.30.0080_mRNA;ortholog_cluster=OG0004062;product=term%3DCyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00134 LTnewLM_30 Pfam protein_match 22251 22631 . - . Parent=LTnewLM_300005800.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_30 AUGUSTUS gene 27820 28485 1 - . ID=LTnewLM_300005900 LTnewLM_30 AUGUSTUS mRNA 27820 28485 1 - . ID=LTnewLM_300005900.1;Parent=LTnewLM_300005900 LTnewLM_30 AUGUSTUS CDS 27820 28485 1 - 0 ID=LTnewLM_300005900.1:CDS:1;Parent=LTnewLM_300005900.1 ### LTnewLM_30 . polypeptide 27820 28485 . - . ID=LTnewLM_300005900.1:pep;Derives_from=LTnewLM_300005900.1;orthologous_to=LmjF.30.0090_mRNA;ortholog_cluster=OG0004063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 30679 31077 1 - . ID=LTnewLM_300006000 LTnewLM_30 AUGUSTUS mRNA 30679 31077 1 - . ID=LTnewLM_300006000.1;Parent=LTnewLM_300006000 LTnewLM_30 AUGUSTUS CDS 30679 31077 1 - 0 ID=LTnewLM_300006000.1:CDS:1;Parent=LTnewLM_300006000.1 ### LTnewLM_30 . polypeptide 30679 31077 . - . ID=LTnewLM_300006000.1:pep;Derives_from=LTnewLM_300006000.1;product=term%3Dhypothetical protein ### LTnewLM_30 . polypeptide 32407 34245 . - . ID=LTnewLM_300006100.1:pep;Derives_from=LTnewLM_300006100.1;orthologous_to=LmjF.30.0100.1_mRNA;ortholog_cluster=OG0004064;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . polypeptide 32407 37095 . - . ID=LTnewLM_300006100.2:pep;Derives_from=LTnewLM_300006100.2;orthologous_to=LmjF.30.0100.2_mRNA;ortholog_cluster=OG0004065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 32407 37438 . - . ID=LTnewLM_300006100;coverage=0.997;sequence_ID=0.946;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.0100_0 LTnewLM_30 Liftoff mRNA 32407 34431 . - . ID=LTnewLM_300006100.1;Parent=LTnewLM_300006100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 32407 34245 . - 0 ID=LTnewLM_300006100.1:CDS:1;Parent=LTnewLM_300006100.1;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 34246 34431 . - . ID=LTnewLM_300006100:five_prime_UTR;Parent=LTnewLM_300006100.1;extra_copy_number=0 LTnewLM_30 Liftoff mRNA 32407 37438 . - . ID=LTnewLM_300006100.2;Parent=LTnewLM_300006100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 32407 37095 . - 0 ID=LTnewLM_300006100.2:CDS:1;Parent=LTnewLM_300006100.2;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 37096 37438 . - . ID=LTnewLM_300006100:five_prime_UTR.1;Parent=LTnewLM_300006100.2;extra_copy_number=0 ### LTnewLM_30 AUGUSTUS gene 38100 39383 1 - . ID=LTnewLM_300006200 LTnewLM_30 AUGUSTUS mRNA 38100 39383 1 - . ID=LTnewLM_300006200.1;Parent=LTnewLM_300006200 LTnewLM_30 AUGUSTUS CDS 38100 39383 1 - 0 ID=LTnewLM_300006200.1:CDS:1;Parent=LTnewLM_300006200.1 ### LTnewLM_30 . polypeptide 38100 39383 . - . ID=LTnewLM_300006200.1:pep;Derives_from=LTnewLM_300006200.1;orthologous_to=LmjF.30.0110_mRNA;ortholog_cluster=OG0004066;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 41783 43648 1 - . ID=LTnewLM_300006300 LTnewLM_30 AUGUSTUS mRNA 41783 43648 1 - . ID=LTnewLM_300006300.1;Parent=LTnewLM_300006300 LTnewLM_30 AUGUSTUS CDS 41783 43648 1 - 0 ID=LTnewLM_300006300.1:CDS:1;Parent=LTnewLM_300006300.1 ### LTnewLM_30 . polypeptide 41783 43648 . - . ID=LTnewLM_300006300.1:pep;Derives_from=LTnewLM_300006300.1;orthologous_to=LmjF.30.0120_mRNA;ortholog_cluster=OG0004067;product=term%3DFAD binding domain/FAD linked oxidases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01565|Pfam:PF02913;Ontology_term=GO:0003824,GO:0016491,GO:0055114,GO:0008762,GO:0050660 LTnewLM_30 Pfam protein_match 41900 42706 . - . Parent=LTnewLM_300006300.1:pep;Name=PF02913;signature_desc=FAD linked oxidases%2C C-terminal domain;Ontology_term=GO:0003824,GO:0050660 LTnewLM_30 Pfam protein_match 42821 43240 . - . Parent=LTnewLM_300006300.1:pep;Name=PF01565;signature_desc=FAD binding domain;Ontology_term=GO:0008762,GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 44471 46588 1 - . ID=LTnewLM_300006400 LTnewLM_30 AUGUSTUS mRNA 44471 46588 1 - . ID=LTnewLM_300006400.1;Parent=LTnewLM_300006400 LTnewLM_30 AUGUSTUS CDS 44471 46588 1 - 0 ID=LTnewLM_300006400.1:CDS:1;Parent=LTnewLM_300006400.1 ### LTnewLM_30 . polypeptide 44471 46588 . - . ID=LTnewLM_300006400.1:pep;Derives_from=LTnewLM_300006400.1;orthologous_to=LmjF.30.0130_mRNA;ortholog_cluster=OG0004068;product=term%3DOB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)/tRNA synthetases class II core domain (F)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF00152|Pfam:PF01409;Ontology_term=GO:0004812,GO:0000049,GO:0005737,GO:0005524,GO:0043039,GO:0000166,GO:0003676,GO:0006418 LTnewLM_30 Pfam protein_match 44765 45805 . - . Parent=LTnewLM_300006400.1:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_30 Pfam protein_match 45398 45538 . - . Parent=LTnewLM_300006400.1:pep;Name=PF01409;signature_desc=tRNA synthetases class II core domain (F);Ontology_term=GO:0000049,GO:0004812,GO:0005524,GO:0043039,GO:0005737 LTnewLM_30 Pfam protein_match 45881 46117 . - . Parent=LTnewLM_300006400.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 47817 48857 1 - . ID=LTnewLM_300006500 LTnewLM_30 AUGUSTUS mRNA 47817 48857 1 - . ID=LTnewLM_300006500.1;Parent=LTnewLM_300006500 LTnewLM_30 AUGUSTUS CDS 47817 48857 1 - 0 ID=LTnewLM_300006500.1:CDS:1;Parent=LTnewLM_300006500.1 ### LTnewLM_30 . polypeptide 47817 48857 . - . ID=LTnewLM_300006500.1:pep;Derives_from=LTnewLM_300006500.1;orthologous_to=LmjF.30.0140_mRNA;ortholog_cluster=OG0004069;product=term%3DYip1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04893;Ontology_term=GO:0016020 LTnewLM_30 Pfam protein_match 47859 48320 . - . Parent=LTnewLM_300006500.1:pep;Name=PF04893;signature_desc=Yip1 domain;Ontology_term=GO:0016020 ### LTnewLM_30 AUGUSTUS gene 50059 51129 1 - . ID=LTnewLM_300006600 LTnewLM_30 AUGUSTUS mRNA 50059 51129 1 - . ID=LTnewLM_300006600.1;Parent=LTnewLM_300006600 LTnewLM_30 AUGUSTUS CDS 50059 51129 1 - 0 ID=LTnewLM_300006600.1:CDS:1;Parent=LTnewLM_300006600.1 ### LTnewLM_30 . polypeptide 50059 51129 . - . ID=LTnewLM_300006600.1:pep;Derives_from=LTnewLM_300006600.1;orthologous_to=LmjF.30.0150_mRNA;ortholog_cluster=OG0004070;product=term%3DLeucine Rich repeat/Leucine Rich Repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516|Pfam:PF00560;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 50371 50442 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_30 Pfam protein_match 50464 50523 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_30 Pfam protein_match 50554 50619 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_30 Pfam protein_match 50566 50613 . - . Parent=LTnewLM_300006600.1:pep;Name=PF00560;signature_desc=Leucine Rich Repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 50650 50703 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_30 Pfam protein_match 50803 50871 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_30 Pfam protein_match 50893 50949 . - . Parent=LTnewLM_300006600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_30 AUGUSTUS gene 52373 54217 1 - . ID=LTnewLM_300006700 LTnewLM_30 AUGUSTUS mRNA 52373 54217 1 - . ID=LTnewLM_300006700.1;Parent=LTnewLM_300006700 LTnewLM_30 AUGUSTUS CDS 52373 54217 1 - 0 ID=LTnewLM_300006700.1:CDS:1;Parent=LTnewLM_300006700.1 ### LTnewLM_30 . polypeptide 52373 54217 . - . ID=LTnewLM_300006700.1:pep;Derives_from=LTnewLM_300006700.1;orthologous_to=LmjF.30.0170_mRNA;ortholog_cluster=OG0004071;product=term%3DRubisco LSMT substrate-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09273 LTnewLM_30 Pfam protein_match 52415 52690 . - . Parent=LTnewLM_300006700.1:pep;Name=PF09273;signature_desc=Rubisco LSMT substrate-binding ### LTnewLM_30 AUGUSTUS gene 56360 57259 1 - . ID=LTnewLM_300006800 LTnewLM_30 AUGUSTUS mRNA 56360 57259 1 - . ID=LTnewLM_300006800.1;Parent=LTnewLM_300006800 LTnewLM_30 AUGUSTUS CDS 56360 57259 1 - 0 ID=LTnewLM_300006800.1:CDS:1;Parent=LTnewLM_300006800.1 ### LTnewLM_30 . polypeptide 56360 57259 . - . ID=LTnewLM_300006800.1:pep;Derives_from=LTnewLM_300006800.1;orthologous_to=LmjF.30.0180_mRNA;ortholog_cluster=OG0004072;product=term%3DNAD binding domain of 6-phosphogluconate dehydrogenase/NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03446|Pfam:PF14833;Ontology_term=GO:0055114,GO:0051287,GO:0004616,GO:0006098 LTnewLM_30 Pfam protein_match 56408 56767 . - . Parent=LTnewLM_300006800.1:pep;Name=PF14833;signature_desc=NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase;Ontology_term=GO:0051287 LTnewLM_30 Pfam protein_match 56777 57253 . - . Parent=LTnewLM_300006800.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 58624 59547 1 - . ID=LTnewLM_300006900 LTnewLM_30 AUGUSTUS mRNA 58624 59547 1 - . ID=LTnewLM_300006900.1;Parent=LTnewLM_300006900 LTnewLM_30 AUGUSTUS CDS 58624 59547 1 - 0 ID=LTnewLM_300006900.1:CDS:1;Parent=LTnewLM_300006900.1 ### LTnewLM_30 . polypeptide 58624 59547 . - . ID=LTnewLM_300006900.1:pep;Derives_from=LTnewLM_300006900.1;product=term%3DPolynucleotide kinase 3 phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08645 LTnewLM_30 Pfam protein_match 58810 59343 . - . Parent=LTnewLM_300006900.1:pep;Name=PF08645;signature_desc=Polynucleotide kinase 3 phosphatase ### LTnewLM_30 AUGUSTUS gene 60359 62035 1 - . ID=LTnewLM_300007000 LTnewLM_30 AUGUSTUS mRNA 60359 62035 1 - . ID=LTnewLM_300007000.1;Parent=LTnewLM_300007000 LTnewLM_30 AUGUSTUS CDS 60359 62035 1 - 0 ID=LTnewLM_300007000.1:CDS:1;Parent=LTnewLM_300007000.1 ### LTnewLM_30 . polypeptide 60359 62035 . - . ID=LTnewLM_300007000.1:pep;Derives_from=LTnewLM_300007000.1;orthologous_to=LmjF.30.0200_mRNA;ortholog_cluster=OG0004073;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 62807 63166 1 - . ID=LTnewLM_300007100 LTnewLM_30 AUGUSTUS mRNA 62807 63166 1 - . ID=LTnewLM_300007100.1;Parent=LTnewLM_300007100 LTnewLM_30 AUGUSTUS CDS 62807 63166 1 - 0 ID=LTnewLM_300007100.1:CDS:1;Parent=LTnewLM_300007100.1 ### LTnewLM_30 . polypeptide 62807 63166 . - . ID=LTnewLM_300007100.1:pep;Derives_from=LTnewLM_300007100.1;orthologous_to=LmjF.30.0205_mRNA;ortholog_cluster=OG0004074;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 63937 65061 1 - . ID=LTnewLM_300007200 LTnewLM_30 AUGUSTUS mRNA 63937 65061 1 - . ID=LTnewLM_300007200.1;Parent=LTnewLM_300007200 LTnewLM_30 AUGUSTUS CDS 63937 65061 1 - 0 ID=LTnewLM_300007200.1:CDS:1;Parent=LTnewLM_300007200.1 ### LTnewLM_30 . polypeptide 63937 65061 . - . ID=LTnewLM_300007200.1:pep;Derives_from=LTnewLM_300007200.1;orthologous_to=LmjF.30.0210_mRNA;ortholog_cluster=OG0004075;product=term%3DRibosomal RNA adenine dimethylase/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00398|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_30 Pfam protein_match 64216 64851 . - . Parent=LTnewLM_300007200.1:pep;Name=PF00398;signature_desc=Ribosomal RNA adenine dimethylase LTnewLM_30 Pfam protein_match 64558 64761 . - . Parent=LTnewLM_300007200.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_30 Pfam protein_match 64570 64755 . - . Parent=LTnewLM_300007200.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_30 AUGUSTUS gene 65703 66206 1 - . ID=LTnewLM_300007300 LTnewLM_30 AUGUSTUS mRNA 65703 66206 1 - . ID=LTnewLM_300007300.1;Parent=LTnewLM_300007300 LTnewLM_30 AUGUSTUS CDS 65703 66206 1 - 0 ID=LTnewLM_300007300.1:CDS:1;Parent=LTnewLM_300007300.1 ### LTnewLM_30 . polypeptide 65703 66206 . - . ID=LTnewLM_300007300.1:pep;Derives_from=LTnewLM_300007300.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 67438 68598 1 - . ID=LTnewLM_300007400 LTnewLM_30 AUGUSTUS mRNA 67438 68598 1 - . ID=LTnewLM_300007400.1;Parent=LTnewLM_300007400 LTnewLM_30 AUGUSTUS CDS 67438 68598 1 - 0 ID=LTnewLM_300007400.1:CDS:1;Parent=LTnewLM_300007400.1 ### LTnewLM_30 . polypeptide 67438 68598 . - . ID=LTnewLM_300007400.1:pep;Derives_from=LTnewLM_300007400.1;orthologous_to=LmjF.30.0220_mRNA;ortholog_cluster=OG0004076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 70456 71511 1 - . ID=LTnewLM_300007500 LTnewLM_30 AUGUSTUS mRNA 70456 71511 1 - . ID=LTnewLM_300007500.1;Parent=LTnewLM_300007500 LTnewLM_30 AUGUSTUS CDS 70456 71511 1 - 0 ID=LTnewLM_300007500.1:CDS:1;Parent=LTnewLM_300007500.1 ### LTnewLM_30 . polypeptide 70456 71511 . - . ID=LTnewLM_300007500.1:pep;Derives_from=LTnewLM_300007500.1;orthologous_to=LmjF.30.0230_mRNA;ortholog_cluster=OG0004077;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_30 Pfam protein_match 70873 71118 . - . Parent=LTnewLM_300007500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_30 AUGUSTUS gene 72497 74287 1 - . ID=LTnewLM_300007600 LTnewLM_30 AUGUSTUS mRNA 72497 74287 1 - . ID=LTnewLM_300007600.1;Parent=LTnewLM_300007600 LTnewLM_30 AUGUSTUS CDS 72497 74287 1 - 0 ID=LTnewLM_300007600.1:CDS:1;Parent=LTnewLM_300007600.1 ### LTnewLM_30 . polypeptide 72497 74287 . - . ID=LTnewLM_300007600.1:pep;Derives_from=LTnewLM_300007600.1;orthologous_to=LmjF.30.0240_mRNA;ortholog_cluster=OG0004078;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 75171 78569 1 - . ID=LTnewLM_300007700 LTnewLM_30 AUGUSTUS mRNA 75171 78569 1 - . ID=LTnewLM_300007700.1;Parent=LTnewLM_300007700 LTnewLM_30 AUGUSTUS CDS 75171 78569 1 - 0 ID=LTnewLM_300007700.1:CDS:1;Parent=LTnewLM_300007700.1 ### LTnewLM_30 . polypeptide 75171 78569 . - . ID=LTnewLM_300007700.1:pep;Derives_from=LTnewLM_300007700.1;orthologous_to=LmjF.30.0250_mRNA;ortholog_cluster=OG0004079;product=term%3DUbiquitin carboxyl-terminal hydrolase/Exonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13423|Pfam:PF00929 LTnewLM_30 Pfam protein_match 75519 75941 . - . Parent=LTnewLM_300007700.1:pep;Name=PF00929;signature_desc=Exonuclease LTnewLM_30 Pfam protein_match 76647 77102 . - . Parent=LTnewLM_300007700.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_30 Liftoff gene 80201 82447 . - . ID=LTnewLM_300007800;coverage=1.0;sequence_ID=0.938;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.0260_0 LTnewLM_30 Liftoff mRNA 80201 82447 . - . ID=LTnewLM_300007800.1;Parent=LTnewLM_300007800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 80201 82447 . - 0 ID=LTnewLM_300007800.1:CDS:1;Parent=LTnewLM_300007800.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 80201 82447 . - . ID=LTnewLM_300007800.1:pep;Derives_from=LTnewLM_300007800.1;orthologous_to=LmjF.30.0260_mRNA;ortholog_cluster=OG0004080;product=term%3DZinc-finger of C2H2 type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12874 LTnewLM_30 Pfam protein_match 80636 80701 . - . Parent=LTnewLM_300007800.1:pep;Name=PF12874;signature_desc=Zinc-finger of C2H2 type ### LTnewLM_30 AUGUSTUS gene 83906 85090 1 - . ID=LTnewLM_300007900 LTnewLM_30 AUGUSTUS mRNA 83906 85090 1 - . ID=LTnewLM_300007900.1;Parent=LTnewLM_300007900 LTnewLM_30 AUGUSTUS CDS 83906 85090 1 - 0 ID=LTnewLM_300007900.1:CDS:1;Parent=LTnewLM_300007900.1 ### LTnewLM_30 . polypeptide 83906 85090 . - . ID=LTnewLM_300007900.1:pep;Derives_from=LTnewLM_300007900.1;orthologous_to=LmjF.30.0270_mRNA;ortholog_cluster=OG0004081;product=term%3DPeptidase family C54%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03416 LTnewLM_30 Pfam protein_match 84218 84961 . - . Parent=LTnewLM_300007900.1:pep;Name=PF03416;signature_desc=Peptidase family C54 ### LTnewLM_30 AUGUSTUS gene 86370 87023 1 - . ID=LTnewLM_300008000 LTnewLM_30 AUGUSTUS mRNA 86370 87023 1 - . ID=LTnewLM_300008000.1;Parent=LTnewLM_300008000 LTnewLM_30 AUGUSTUS CDS 86370 87023 1 - 0 ID=LTnewLM_300008000.1:CDS:1;Parent=LTnewLM_300008000.1 ### LTnewLM_30 . polypeptide 86370 87023 . - . ID=LTnewLM_300008000.1:pep;Derives_from=LTnewLM_300008000.1;orthologous_to=LmjF.30.0280_mRNA;ortholog_cluster=OG0004082;product=term%3DLIM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00412;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 86517 86708 . - . Parent=LTnewLM_300008000.1:pep;Name=PF00412;signature_desc=LIM domain;Ontology_term=GO:0008270 ### LTnewLM_30 Liftoff gene 89409 94172 . - . ID=LTnewLM_300008100;coverage=0.999;sequence_ID=0.945;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.0290_0 LTnewLM_30 Liftoff mRNA 89409 94172 . - . ID=LTnewLM_300008100.1;Parent=LTnewLM_300008100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 89409 94172 . - 0 ID=LTnewLM_300008100.1:CDS:1;Parent=LTnewLM_300008100.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 89409 94172 . - . ID=LTnewLM_300008100.1:pep;Derives_from=LTnewLM_300008100.1;orthologous_to=LmjF.30.0290_mRNA;ortholog_cluster=OG0004083;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 95770 96216 1 - . ID=LTnewLM_300008200 LTnewLM_30 AUGUSTUS mRNA 95770 96216 1 - . ID=LTnewLM_300008200.1;Parent=LTnewLM_300008200 LTnewLM_30 AUGUSTUS CDS 95770 96216 1 - 0 ID=LTnewLM_300008200.1:CDS:1;Parent=LTnewLM_300008200.1 ### LTnewLM_30 . polypeptide 95770 96216 . - . ID=LTnewLM_300008200.1:pep;Derives_from=LTnewLM_300008200.1;orthologous_to=LmjF.30.0300_mRNA;ortholog_cluster=OG0004084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 97442 101629 1 - . ID=LTnewLM_300008300 LTnewLM_30 AUGUSTUS mRNA 97442 101629 1 - . ID=LTnewLM_300008300.1;Parent=LTnewLM_300008300 LTnewLM_30 AUGUSTUS CDS 97442 101629 1 - 0 ID=LTnewLM_300008300.1:CDS:1;Parent=LTnewLM_300008300.1 ### LTnewLM_30 . polypeptide 97442 101629 . - . ID=LTnewLM_300008300.1:pep;Derives_from=LTnewLM_300008300.1;orthologous_to=LmjF.30.0310_mRNA;ortholog_cluster=OG0004085;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 102610 104370 1 - . ID=LTnewLM_300008400 LTnewLM_30 AUGUSTUS mRNA 102610 104370 1 - . ID=LTnewLM_300008400.1;Parent=LTnewLM_300008400 LTnewLM_30 AUGUSTUS CDS 102610 104370 1 - 0 ID=LTnewLM_300008400.1:CDS:1;Parent=LTnewLM_300008400.1 ### LTnewLM_30 . polypeptide 102610 104370 . - . ID=LTnewLM_300008400.1:pep;Derives_from=LTnewLM_300008400.1;orthologous_to=LmjF.30.0320_mRNA;ortholog_cluster=OG0004086;product=term%3DSad1 / UNC-like C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07738 LTnewLM_30 Pfam protein_match 103783 104094 . - . Parent=LTnewLM_300008400.1:pep;Name=PF07738;signature_desc=Sad1 / UNC-like C-terminal ### LTnewLM_30 AUGUSTUS gene 105330 107910 0.97 - . ID=LTnewLM_300008500 LTnewLM_30 AUGUSTUS mRNA 105330 107910 0.97 - . ID=LTnewLM_300008500.1;Parent=LTnewLM_300008500 LTnewLM_30 AUGUSTUS CDS 105330 105413 0.97 - 0 ID=LTnewLM_300008500.1:CDS:1;Parent=LTnewLM_300008500.1 LTnewLM_30 AUGUSTUS CDS 105460 107910 0.97 - 0 ID=LTnewLM_300008500.1:CDS:2;Parent=LTnewLM_300008500.1 ### LTnewLM_30 . polypeptide 105330 107910 . - . ID=LTnewLM_300008500.1:pep;Derives_from=LTnewLM_300008500.1;orthologous_to=LTnewLM_330032500.1,LmjF.30.0330_mRNA,LmjF.33.2350_mRNA;ortholog_cluster=OG0000209;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_30 Pfam protein_match 106936 107169 . - . Parent=LTnewLM_300008500.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_30 AUGUSTUS gene 109368 111764 1 - . ID=LTnewLM_300008600 LTnewLM_30 AUGUSTUS mRNA 109368 111764 1 - . ID=LTnewLM_300008600.1;Parent=LTnewLM_300008600 LTnewLM_30 AUGUSTUS CDS 109368 111764 1 - 0 ID=LTnewLM_300008600.1:CDS:1;Parent=LTnewLM_300008600.1 ### LTnewLM_30 . polypeptide 109368 111764 . - . ID=LTnewLM_300008600.1:pep;Derives_from=LTnewLM_300008600.1;orthologous_to=LmjF.30.0340_mRNA;ortholog_cluster=OG0004087;product=term%3DKu70/Ku80 N-terminal alpha/beta domain/Ku70/Ku80 beta-barrel domain/Ku C terminal domain like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03731|Pfam:PF02735|Pfam:PF08785;Ontology_term=GO:0006303,GO:0016817,GO:0003677 LTnewLM_30 Pfam protein_match 109449 109817 . - . Parent=LTnewLM_300008600.1:pep;Name=PF08785;signature_desc=Ku C terminal domain like;Ontology_term=GO:0016817 LTnewLM_30 Pfam protein_match 110424 111005 . - . Parent=LTnewLM_300008600.1:pep;Name=PF02735;signature_desc=Ku70/Ku80 beta-barrel domain;Ontology_term=GO:0003677,GO:0006303 LTnewLM_30 Pfam protein_match 111318 111707 . - . Parent=LTnewLM_300008600.1:pep;Name=PF03731;signature_desc=Ku70/Ku80 N-terminal alpha/beta domain ### LTnewLM_30 AUGUSTUS gene 114984 116816 1 - . ID=LTnewLM_300008700 LTnewLM_30 AUGUSTUS mRNA 114984 116816 1 - . ID=LTnewLM_300008700.1;Parent=LTnewLM_300008700 LTnewLM_30 AUGUSTUS CDS 114984 116816 1 - 0 ID=LTnewLM_300008700.1:CDS:1;Parent=LTnewLM_300008700.1 ### LTnewLM_30 . polypeptide 114984 116816 . - . ID=LTnewLM_300008700.1:pep;Derives_from=LTnewLM_300008700.1;orthologous_to=LmjF.30.0350_mRNA;ortholog_cluster=OG0004088;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_30 Pfam protein_match 115755 116759 . - . Parent=LTnewLM_300008700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_30 Pfam protein_match 116346 116774 . - . Parent=LTnewLM_300008700.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_30 AUGUSTUS gene 118442 120370 1 - . ID=LTnewLM_300008800 LTnewLM_30 AUGUSTUS mRNA 118442 120370 1 - . ID=LTnewLM_300008800.1;Parent=LTnewLM_300008800 LTnewLM_30 AUGUSTUS CDS 118442 120370 1 - 0 ID=LTnewLM_300008800.1:CDS:1;Parent=LTnewLM_300008800.1 ### LTnewLM_30 . polypeptide 118442 120370 . - . ID=LTnewLM_300008800.1:pep;Derives_from=LTnewLM_300008800.1;orthologous_to=LmjF.30.0360_mRNA;ortholog_cluster=OG0004089;product=term%3DEndomembrane protein 70%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02990;Ontology_term=GO:0016021 LTnewLM_30 Pfam protein_match 118583 120136 . - . Parent=LTnewLM_300008800.1:pep;Name=PF02990;signature_desc=Endomembrane protein 70;Ontology_term=GO:0016021 ### LTnewLM_30 AUGUSTUS gene 121950 123182 1 - . ID=LTnewLM_300008900 LTnewLM_30 AUGUSTUS mRNA 121950 123182 1 - . ID=LTnewLM_300008900.1;Parent=LTnewLM_300008900 LTnewLM_30 AUGUSTUS CDS 121950 123182 1 - 0 ID=LTnewLM_300008900.1:CDS:1;Parent=LTnewLM_300008900.1 ### LTnewLM_30 . polypeptide 121950 123182 . - . ID=LTnewLM_300008900.1:pep;Derives_from=LTnewLM_300008900.1;orthologous_to=LmjF.30.0370_mRNA;ortholog_cluster=OG0004090;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 122106 123089 . - . Parent=LTnewLM_300008900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 122472 123080 . - . Parent=LTnewLM_300008900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_30 . polypeptide 126351 127505 . - . ID=LTnewLM_300009000.1:pep;Derives_from=LTnewLM_300009000.1;orthologous_to=LTnewLM_300009000.2,LmjF.30.0380.1_mRNA,LmjF.30.0380.2_mRNA;ortholog_cluster=OG0000290;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_30 Pfam protein_match 126711 127424 . - . Parent=LTnewLM_300009000.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_30 . polypeptide 126351 128120 . - . ID=LTnewLM_300009000.2:pep;Derives_from=LTnewLM_300009000.2;orthologous_to=LTnewLM_300009000.1,LmjF.30.0380.1_mRNA,LmjF.30.0380.2_mRNA;ortholog_cluster=OG0000290;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_30 Pfam protein_match 126711 127424 . - . Parent=LTnewLM_300009000.2:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_30 . pseudogene 126351 129752 . - . ID=LTnewLM_300009000:pseudogene;coverage=0.990;sequence_ID=0.930;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.0380_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 126351 127639 . - . ID=LTnewLM_300009000.1;Parent=LTnewLM_300009000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 126351 127505 . - . ID=LTnewLM_300009000.1:pseudogenic_exon:1;Parent=LTnewLM_300009000.1;extra_copy_number=0 LTnewLM_30 . pseudogenic_transcript 126351 129752 . - . ID=LTnewLM_300009000.2;Parent=LTnewLM_300009000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 126351 128120 . - . ID=LTnewLM_300009000.2:pseudogenic_exon:1;Parent=LTnewLM_300009000.2;extra_copy_number=0 ### LTnewLM_30 AUGUSTUS gene 133079 133879 1 - . ID=LTnewLM_300009100 LTnewLM_30 AUGUSTUS mRNA 133079 133879 1 - . ID=LTnewLM_300009100.1;Parent=LTnewLM_300009100 LTnewLM_30 AUGUSTUS CDS 133079 133879 1 - 0 ID=LTnewLM_300009100.1:CDS:1;Parent=LTnewLM_300009100.1 ### LTnewLM_30 . polypeptide 133079 133879 . - . ID=LTnewLM_300009100.1:pep;Derives_from=LTnewLM_300009100.1;orthologous_to=LmjF.30.0390_mRNA;ortholog_cluster=OG0004091;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 135894 137384 1 - . ID=LTnewLM_300009200 LTnewLM_30 AUGUSTUS mRNA 135894 137384 1 - . ID=LTnewLM_300009200.1;Parent=LTnewLM_300009200 LTnewLM_30 AUGUSTUS CDS 135894 137384 1 - 0 ID=LTnewLM_300009200.1:CDS:1;Parent=LTnewLM_300009200.1 ### LTnewLM_30 . polypeptide 135894 137384 . - . ID=LTnewLM_300009200.1:pep;Derives_from=LTnewLM_300009200.1;orthologous_to=LmjF.30.0400_mRNA;ortholog_cluster=OG0004092;product=term%3DSerine aminopeptidase%2C S33/X-Pro dipeptidyl-peptidase (S15 family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF02129;Ontology_term=GO:0016787 LTnewLM_30 Pfam protein_match 136755 137120 . - . Parent=LTnewLM_300009200.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_30 Pfam protein_match 136827 137081 . - . Parent=LTnewLM_300009200.1:pep;Name=PF02129;signature_desc=X-Pro dipeptidyl-peptidase (S15 family);Ontology_term=GO:0016787 ### LTnewLM_30 AUGUSTUS gene 138306 139124 1 - . ID=LTnewLM_300009300 LTnewLM_30 AUGUSTUS mRNA 138306 139124 1 - . ID=LTnewLM_300009300.1;Parent=LTnewLM_300009300 LTnewLM_30 AUGUSTUS CDS 138306 139124 1 - 0 ID=LTnewLM_300009300.1:CDS:1;Parent=LTnewLM_300009300.1 ### LTnewLM_30 . polypeptide 138306 139124 . - . ID=LTnewLM_300009300.1:pep;Derives_from=LTnewLM_300009300.1;orthologous_to=LmjF.30.0405_mRNA;ortholog_cluster=OG0004093;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_30 Pfam protein_match 138387 138818 . - . Parent=LTnewLM_300009300.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_30 AUGUSTUS gene 139604 141067 1 - . ID=LTnewLM_300009400 LTnewLM_30 AUGUSTUS mRNA 139604 141067 1 - . ID=LTnewLM_300009400.1;Parent=LTnewLM_300009400 LTnewLM_30 AUGUSTUS CDS 139604 141067 1 - 0 ID=LTnewLM_300009400.1:CDS:1;Parent=LTnewLM_300009400.1 ### LTnewLM_30 . polypeptide 139604 141067 . - . ID=LTnewLM_300009400.1:pep;Derives_from=LTnewLM_300009400.1;orthologous_to=LmjF.30.0410_mRNA;ortholog_cluster=OG0004094;product=term%3DWD domain%2C G-beta repeat/Anaphase-promoting complex subunit 4 WD40 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF12894;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 139694 139765 . - . Parent=LTnewLM_300009400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 139928 140086 . - . Parent=LTnewLM_300009400.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_30 Pfam protein_match 140000 140095 . - . Parent=LTnewLM_300009400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 140132 140227 . - . Parent=LTnewLM_300009400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 142038 143138 1 - . ID=LTnewLM_300009500 LTnewLM_30 AUGUSTUS mRNA 142038 143138 1 - . ID=LTnewLM_300009500.1;Parent=LTnewLM_300009500 LTnewLM_30 AUGUSTUS CDS 142038 143138 1 - 0 ID=LTnewLM_300009500.1:CDS:1;Parent=LTnewLM_300009500.1 ### LTnewLM_30 . polypeptide 142038 143138 . - . ID=LTnewLM_300009500.1:pep;Derives_from=LTnewLM_300009500.1;orthologous_to=LmjF.30.0420_mRNA;ortholog_cluster=OG0004095;product=term%3DDiacylglycerol kinase catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00781;Ontology_term=GO:0004143,GO:0007205 LTnewLM_30 Pfam protein_match 142725 143120 . - . Parent=LTnewLM_300009500.1:pep;Name=PF00781;signature_desc=Diacylglycerol kinase catalytic domain;Ontology_term=GO:0004143,GO:0007205 ### LTnewLM_30 AUGUSTUS gene 143922 145580 1 - . ID=LTnewLM_300009600 LTnewLM_30 AUGUSTUS mRNA 143922 145580 1 - . ID=LTnewLM_300009600.1;Parent=LTnewLM_300009600 LTnewLM_30 AUGUSTUS CDS 143922 145580 1 - 0 ID=LTnewLM_300009600.1:CDS:1;Parent=LTnewLM_300009600.1 ### LTnewLM_30 . polypeptide 143922 145580 . - . ID=LTnewLM_300009600.1:pep;Derives_from=LTnewLM_300009600.1;orthologous_to=LmjF.30.0430_mRNA;ortholog_cluster=OG0004096;product=term%3DThioredoxin/Erv1 / Alr family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF04777;Ontology_term=GO:0055114,GO:0045454,GO:0016972 LTnewLM_30 Pfam protein_match 144321 144536 . - . Parent=LTnewLM_300009600.1:pep;Name=PF04777;signature_desc=Erv1 / Alr family;Ontology_term=GO:0016972,GO:0055114 LTnewLM_30 Pfam protein_match 145191 145394 . - . Parent=LTnewLM_300009600.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_30 AUGUSTUS gene 151018 151884 1 - . ID=LTnewLM_300009700 LTnewLM_30 AUGUSTUS mRNA 151018 151884 1 - . ID=LTnewLM_300009700.1;Parent=LTnewLM_300009700 LTnewLM_30 AUGUSTUS CDS 151018 151884 1 - 0 ID=LTnewLM_300009700.1:CDS:1;Parent=LTnewLM_300009700.1 ### LTnewLM_30 . polypeptide 151018 151884 . - . ID=LTnewLM_300009700.1:pep;Derives_from=LTnewLM_300009700.1;orthologous_to=LmjF.30.0440_mRNA;ortholog_cluster=OG0004097;product=term%3DRibosome recycling factor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01765 LTnewLM_30 Pfam protein_match 151162 151500 . - . Parent=LTnewLM_300009700.1:pep;Name=PF01765;signature_desc=Ribosome recycling factor ### LTnewLM_30 AUGUSTUS gene 153438 154790 1 - . ID=LTnewLM_300009800 LTnewLM_30 AUGUSTUS mRNA 153438 154790 1 - . ID=LTnewLM_300009800.1;Parent=LTnewLM_300009800 LTnewLM_30 AUGUSTUS CDS 153438 154790 1 - 0 ID=LTnewLM_300009800.1:CDS:1;Parent=LTnewLM_300009800.1 ### LTnewLM_30 . polypeptide 153438 154790 . - . ID=LTnewLM_300009800.1:pep;Derives_from=LTnewLM_300009800.1;orthologous_to=LmjF.30.0450_mRNA;ortholog_cluster=OG0004098;product=term%3DEukaryotic initiation factor 4E%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01652;Ontology_term=GO:0003723,GO:0005737,GO:0006413,GO:0003743 LTnewLM_30 Pfam protein_match 153549 153989 . - . Parent=LTnewLM_300009800.1:pep;Name=PF01652;signature_desc=Eukaryotic initiation factor 4E;Ontology_term=GO:0003723,GO:0003743,GO:0006413,GO:0005737 ### LTnewLM_30 AUGUSTUS gene 156378 158030 1 - . ID=LTnewLM_300009900 LTnewLM_30 AUGUSTUS mRNA 156378 158030 1 - . ID=LTnewLM_300009900.1;Parent=LTnewLM_300009900 LTnewLM_30 AUGUSTUS CDS 156378 158030 1 - 0 ID=LTnewLM_300009900.1:CDS:1;Parent=LTnewLM_300009900.1 ### LTnewLM_30 . polypeptide 156378 158030 . - . ID=LTnewLM_300009900.1:pep;Derives_from=LTnewLM_300009900.1;orthologous_to=LmjF.30.0460_mRNA;ortholog_cluster=OG0004099;product=term%3DOB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01336|Pfam:PF00152;Ontology_term=GO:0004812,GO:0005524,GO:0000166,GO:0003676,GO:0006418 LTnewLM_30 Pfam protein_match 156402 157451 . - . Parent=LTnewLM_300009900.1:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_30 Pfam protein_match 157542 157790 . - . Parent=LTnewLM_300009900.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 159002 161005 1 - . ID=LTnewLM_300010000 LTnewLM_30 AUGUSTUS mRNA 159002 161005 1 - . ID=LTnewLM_300010000.1;Parent=LTnewLM_300010000 LTnewLM_30 AUGUSTUS CDS 159002 161005 1 - 0 ID=LTnewLM_300010000.1:CDS:1;Parent=LTnewLM_300010000.1 ### LTnewLM_30 . polypeptide 159002 161005 . - . ID=LTnewLM_300010000.1:pep;Derives_from=LTnewLM_300010000.1;orthologous_to=LmjF.30.0470_mRNA;ortholog_cluster=OG0004100;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 161720 163129 1 - . ID=LTnewLM_300010100 LTnewLM_30 AUGUSTUS mRNA 161720 163129 1 - . ID=LTnewLM_300010100.1;Parent=LTnewLM_300010100 LTnewLM_30 AUGUSTUS CDS 161720 163129 1 - 0 ID=LTnewLM_300010100.1:CDS:1;Parent=LTnewLM_300010100.1 ### LTnewLM_30 . polypeptide 161720 163129 . - . ID=LTnewLM_300010100.1:pep;Derives_from=LTnewLM_300010100.1;orthologous_to=LmjF.30.0480_mRNA;ortholog_cluster=OG0004101;product=term%3DBystin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05291 LTnewLM_30 Pfam protein_match 161759 162634 . - . Parent=LTnewLM_300010100.1:pep;Name=PF05291;signature_desc=Bystin ### LTnewLM_30 AUGUSTUS gene 164054 166204 1 - . ID=LTnewLM_300010200 LTnewLM_30 AUGUSTUS mRNA 164054 166204 1 - . ID=LTnewLM_300010200.1;Parent=LTnewLM_300010200 LTnewLM_30 AUGUSTUS CDS 164054 166204 1 - 0 ID=LTnewLM_300010200.1:CDS:1;Parent=LTnewLM_300010200.1 ### LTnewLM_30 . polypeptide 164054 166204 . - . ID=LTnewLM_300010200.1:pep;Derives_from=LTnewLM_300010200.1;orthologous_to=LmjF.30.0490_mRNA;ortholog_cluster=OG0004102;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . pseudogene 166829 167136 . - . ID=LTnewLM_300010300:pseudogene;coverage=0.941;sequence_ID=0.865;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.0495_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 166829 167136 . - . ID=LTnewLM_300010300.1;Parent=LTnewLM_300010300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 166829 167136 . - . ID=LTnewLM_300010300.1:pseudogenic_exon:1;Parent=LTnewLM_300010300.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 166829 167136 . - . ID=LTnewLM_300010300.1:pep;Derives_from=LTnewLM_300010300.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 168644 170101 1 - . ID=LTnewLM_300010400 LTnewLM_30 AUGUSTUS mRNA 168644 170101 1 - . ID=LTnewLM_300010400.1;Parent=LTnewLM_300010400 LTnewLM_30 AUGUSTUS CDS 168644 170101 1 - 0 ID=LTnewLM_300010400.1:CDS:1;Parent=LTnewLM_300010400.1 ### LTnewLM_30 . polypeptide 168644 170101 . - . ID=LTnewLM_300010400.1:pep;Derives_from=LTnewLM_300010400.1;orthologous_to=LmjF.30.0500_mRNA;ortholog_cluster=OG0004103;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 171654 175100 1 - . ID=LTnewLM_300010500 LTnewLM_30 AUGUSTUS mRNA 171654 175100 1 - . ID=LTnewLM_300010500.1;Parent=LTnewLM_300010500 LTnewLM_30 AUGUSTUS CDS 171654 175100 1 - 0 ID=LTnewLM_300010500.1:CDS:1;Parent=LTnewLM_300010500.1 ### LTnewLM_30 . polypeptide 171654 175100 . - . ID=LTnewLM_300010500.1:pep;Derives_from=LTnewLM_300010500.1;orthologous_to=LmjF.30.0510_mRNA;ortholog_cluster=OG0004104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 175896 178586 1 - . ID=LTnewLM_300010600 LTnewLM_30 AUGUSTUS mRNA 175896 178586 1 - . ID=LTnewLM_300010600.1;Parent=LTnewLM_300010600 LTnewLM_30 AUGUSTUS CDS 175896 178586 1 - 0 ID=LTnewLM_300010600.1:CDS:1;Parent=LTnewLM_300010600.1 ### LTnewLM_30 . polypeptide 175896 178586 . - . ID=LTnewLM_300010600.1:pep;Derives_from=LTnewLM_300010600.1;orthologous_to=LmjF.30.0520_mRNA;ortholog_cluster=OG0004105;product=term%3DN-acetyltransferase B complex (NatB) non catalytic subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09797 LTnewLM_30 Pfam protein_match 176724 177698 . - . Parent=LTnewLM_300010600.1:pep;Name=PF09797;signature_desc=N-acetyltransferase B complex (NatB) non catalytic subunit ### LTnewLM_30 AUGUSTUS gene 179485 180798 1 - . ID=LTnewLM_300010700 LTnewLM_30 AUGUSTUS mRNA 179485 180798 1 - . ID=LTnewLM_300010700.1;Parent=LTnewLM_300010700 LTnewLM_30 AUGUSTUS CDS 179485 180798 1 - 0 ID=LTnewLM_300010700.1:CDS:1;Parent=LTnewLM_300010700.1 ### LTnewLM_30 . polypeptide 179485 180798 . - . ID=LTnewLM_300010700.1:pep;Derives_from=LTnewLM_300010700.1;orthologous_to=LmjF.30.0530_mRNA;ortholog_cluster=OG0004106;product=term%3DOligosaccharide biosynthesis protein Alg14 like/Glycosyltransferase family 28 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08660|Pfam:PF04101;Ontology_term=GO:0030259,GO:0005975,GO:0016758,GO:0030246 LTnewLM_30 Pfam protein_match 179623 180066 . - . Parent=LTnewLM_300010700.1:pep;Name=PF04101;signature_desc=Glycosyltransferase family 28 C-terminal domain;Ontology_term=GO:0016758,GO:0030246,GO:0005975,GO:0030259 LTnewLM_30 Pfam protein_match 180160 180681 . - . Parent=LTnewLM_300010700.1:pep;Name=PF08660;signature_desc=Oligosaccharide biosynthesis protein Alg14 like ### LTnewLM_30 AUGUSTUS gene 181548 182114 1 - . ID=LTnewLM_300010800 LTnewLM_30 AUGUSTUS mRNA 181548 182114 1 - . ID=LTnewLM_300010800.1;Parent=LTnewLM_300010800 LTnewLM_30 AUGUSTUS CDS 181548 182114 1 - 0 ID=LTnewLM_300010800.1:CDS:1;Parent=LTnewLM_300010800.1 ### LTnewLM_30 . polypeptide 181548 182114 . - . ID=LTnewLM_300010800.1:pep;Derives_from=LTnewLM_300010800.1;orthologous_to=LmjF.30.0540_mRNA;ortholog_cluster=OG0004107;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 181779 181985 . - . Parent=LTnewLM_300010800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 183244 185073 1 - . ID=LTnewLM_300010900 LTnewLM_30 AUGUSTUS mRNA 183244 185073 1 - . ID=LTnewLM_300010900.1;Parent=LTnewLM_300010900 LTnewLM_30 AUGUSTUS CDS 183244 185073 1 - 0 ID=LTnewLM_300010900.1:CDS:1;Parent=LTnewLM_300010900.1 ### LTnewLM_30 . polypeptide 183244 185073 . - . ID=LTnewLM_300010900.1:pep;Derives_from=LTnewLM_300010900.1;orthologous_to=LmjF.30.0550_mRNA;ortholog_cluster=OG0004108;product=term%3DLMBR1-like membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04791 LTnewLM_30 Pfam protein_match 183604 185061 . - . Parent=LTnewLM_300010900.1:pep;Name=PF04791;signature_desc=LMBR1-like membrane protein ### LTnewLM_30 AUGUSTUS gene 187205 188182 1 - . ID=LTnewLM_300011000 LTnewLM_30 AUGUSTUS mRNA 187205 188182 1 - . ID=LTnewLM_300011000.1;Parent=LTnewLM_300011000 LTnewLM_30 AUGUSTUS CDS 187205 188182 1 - 0 ID=LTnewLM_300011000.1:CDS:1;Parent=LTnewLM_300011000.1 ### LTnewLM_30 . polypeptide 187205 188182 . - . ID=LTnewLM_300011000.1:pep;Derives_from=LTnewLM_300011000.1;orthologous_to=LmjF.30.0560_mRNA;ortholog_cluster=OG0004109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 188771 190195 1 - . ID=LTnewLM_300011100 LTnewLM_30 AUGUSTUS mRNA 188771 190195 1 - . ID=LTnewLM_300011100.1;Parent=LTnewLM_300011100 LTnewLM_30 AUGUSTUS CDS 188771 190195 1 - 0 ID=LTnewLM_300011100.1:CDS:1;Parent=LTnewLM_300011100.1 ### LTnewLM_30 . polypeptide 188771 190195 . - . ID=LTnewLM_300011100.1:pep;Derives_from=LTnewLM_300011100.1;orthologous_to=LmjF.30.0570_mRNA;ortholog_cluster=OG0004110;product=term%3DDomain of unknown function (DUF382)/PSP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04037|Pfam:PF04046;Ontology_term=GO:0005634 LTnewLM_30 Pfam protein_match 189257 189391 . - . Parent=LTnewLM_300011100.1:pep;Name=PF04046;signature_desc=PSP LTnewLM_30 Pfam protein_match 189536 189745 . - . Parent=LTnewLM_300011100.1:pep;Name=PF04037;signature_desc=Domain of unknown function (DUF382);Ontology_term=GO:0005634 ### LTnewLM_30 AUGUSTUS gene 191606 193177 1 - . ID=LTnewLM_300011200 LTnewLM_30 AUGUSTUS mRNA 191606 193177 1 - . ID=LTnewLM_300011200.1;Parent=LTnewLM_300011200 LTnewLM_30 AUGUSTUS CDS 191606 193177 1 - 0 ID=LTnewLM_300011200.1:CDS:1;Parent=LTnewLM_300011200.1 ### LTnewLM_30 . polypeptide 191606 193177 . - . ID=LTnewLM_300011200.1:pep;Derives_from=LTnewLM_300011200.1;orthologous_to=LmjF.30.0580_mRNA;ortholog_cluster=OG0004111;product=term%3DAMP-binding enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00501;Ontology_term=GO:0003824,GO:0008152 LTnewLM_30 Pfam protein_match 191690 192325 . - . Parent=LTnewLM_300011200.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 LTnewLM_30 Pfam protein_match 192671 192928 . - . Parent=LTnewLM_300011200.1:pep;Name=PF00501;signature_desc=AMP-binding enzyme;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_30 AUGUSTUS gene 194324 196816 1 - . ID=LTnewLM_300011300 LTnewLM_30 AUGUSTUS mRNA 194324 196816 1 - . ID=LTnewLM_300011300.1;Parent=LTnewLM_300011300 LTnewLM_30 AUGUSTUS CDS 194324 196816 1 - 0 ID=LTnewLM_300011300.1:CDS:1;Parent=LTnewLM_300011300.1 ### LTnewLM_30 . polypeptide 194324 196816 . - . ID=LTnewLM_300011300.1:pep;Derives_from=LTnewLM_300011300.1;orthologous_to=LmjF.30.0590_mRNA;ortholog_cluster=OG0004112;product=term%3DCiliary BBSome complex subunit 2%2C N-terminal/Ciliary BBSome complex subunit 2%2C middle region/Ciliary BBSome complex subunit 2%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14781|Pfam:PF14783|Pfam:PF14782 LTnewLM_30 Pfam protein_match 194342 195748 . - . Parent=LTnewLM_300011300.1:pep;Name=PF14782;signature_desc=Ciliary BBSome complex subunit 2%2C C-terminal LTnewLM_30 Pfam protein_match 195782 196111 . - . Parent=LTnewLM_300011300.1:pep;Name=PF14783;signature_desc=Ciliary BBSome complex subunit 2%2C middle region LTnewLM_30 Pfam protein_match 196298 196639 . - . Parent=LTnewLM_300011300.1:pep;Name=PF14781;signature_desc=Ciliary BBSome complex subunit 2%2C N-terminal ### LTnewLM_30 AUGUSTUS gene 204101 206887 1 - . ID=LTnewLM_300011400 LTnewLM_30 AUGUSTUS mRNA 204101 206887 1 - . ID=LTnewLM_300011400.1;Parent=LTnewLM_300011400 LTnewLM_30 AUGUSTUS CDS 204101 206887 1 - 0 ID=LTnewLM_300011400.1:CDS:1;Parent=LTnewLM_300011400.1 ### LTnewLM_30 . polypeptide 204101 206887 . - . ID=LTnewLM_300011400.1:pep;Derives_from=LTnewLM_300011400.1;orthologous_to=LmjF.30.0600_mRNA;ortholog_cluster=OG0004113;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 205061 205825 . - . Parent=LTnewLM_300011400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 205073 205828 . - . Parent=LTnewLM_300011400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 211536 213149 1 - . ID=LTnewLM_300011500 LTnewLM_30 AUGUSTUS mRNA 211536 213149 1 - . ID=LTnewLM_300011500.1;Parent=LTnewLM_300011500 LTnewLM_30 AUGUSTUS CDS 211536 213149 1 - 0 ID=LTnewLM_300011500.1:CDS:1;Parent=LTnewLM_300011500.1 ### LTnewLM_30 . polypeptide 211536 213149 . - . ID=LTnewLM_300011500.1:pep;Derives_from=LTnewLM_300011500.1;orthologous_to=LmjF.30.0610_mRNA;ortholog_cluster=OG0004114;product=term%3DCytochrome b5-like Heme/Steroid binding domain/Oxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173|Pfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0020037,GO:0016491 LTnewLM_30 Pfam protein_match 211596 211955 . - . Parent=LTnewLM_300011500.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_30 Pfam protein_match 212028 212258 . - . Parent=LTnewLM_300011500.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain LTnewLM_30 Pfam protein_match 212391 212573 . - . Parent=LTnewLM_300011500.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 LTnewLM_30 Pfam protein_match 212676 212891 . - . Parent=LTnewLM_300011500.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_30 AUGUSTUS gene 214233 214883 1 - . ID=LTnewLM_300011600 LTnewLM_30 AUGUSTUS mRNA 214233 214883 1 - . ID=LTnewLM_300011600.1;Parent=LTnewLM_300011600 LTnewLM_30 AUGUSTUS CDS 214233 214883 1 - 0 ID=LTnewLM_300011600.1:CDS:1;Parent=LTnewLM_300011600.1 ### LTnewLM_30 . polypeptide 214233 214883 . - . ID=LTnewLM_300011600.1:pep;Derives_from=LTnewLM_300011600.1;orthologous_to=LmjF.30.0620_mRNA;ortholog_cluster=OG0004115;product=term%3DRibosome biogenesis regulatory protein (RRS1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04939;Ontology_term=GO:0042254,GO:0005634 LTnewLM_30 Pfam protein_match 214374 214877 . - . Parent=LTnewLM_300011600.1:pep;Name=PF04939;signature_desc=Ribosome biogenesis regulatory protein (RRS1);Ontology_term=GO:0042254,GO:0005634 ### LTnewLM_30 AUGUSTUS gene 215655 217076 1 - . ID=LTnewLM_300011700 LTnewLM_30 AUGUSTUS mRNA 215655 217076 1 - . ID=LTnewLM_300011700.1;Parent=LTnewLM_300011700 LTnewLM_30 AUGUSTUS CDS 215655 217076 1 - 0 ID=LTnewLM_300011700.1:CDS:1;Parent=LTnewLM_300011700.1 ### LTnewLM_30 . polypeptide 215655 217076 . - . ID=LTnewLM_300011700.1:pep;Derives_from=LTnewLM_300011700.1;orthologous_to=LmjF.30.0630_mRNA;ortholog_cluster=OG0004116;product=term%3DHistidyl-tRNA synthetase/Anticodon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13393|Pfam:PF03129 LTnewLM_30 Pfam protein_match 215709 215921 . - . Parent=LTnewLM_300011700.1:pep;Name=PF03129;signature_desc=Anticodon binding domain LTnewLM_30 Pfam protein_match 216003 216914 . - . Parent=LTnewLM_300011700.1:pep;Name=PF13393;signature_desc=Histidyl-tRNA synthetase ### LTnewLM_30 AUGUSTUS gene 217764 218378 1 - . ID=LTnewLM_300011800 LTnewLM_30 AUGUSTUS mRNA 217764 218378 1 - . ID=LTnewLM_300011800.1;Parent=LTnewLM_300011800 LTnewLM_30 AUGUSTUS CDS 217764 218378 1 - 0 ID=LTnewLM_300011800.1:CDS:1;Parent=LTnewLM_300011800.1 ### LTnewLM_30 . polypeptide 217764 218378 . - . ID=LTnewLM_300011800.1:pep;Derives_from=LTnewLM_300011800.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 218787 219383 1 - . ID=LTnewLM_300011900 LTnewLM_30 AUGUSTUS mRNA 218787 219383 1 - . ID=LTnewLM_300011900.1;Parent=LTnewLM_300011900 LTnewLM_30 AUGUSTUS CDS 218787 219383 1 - 0 ID=LTnewLM_300011900.1:CDS:1;Parent=LTnewLM_300011900.1 ### LTnewLM_30 . polypeptide 218787 219383 . - . ID=LTnewLM_300011900.1:pep;Derives_from=LTnewLM_300011900.1;orthologous_to=LmjF.30.0640_mRNA;ortholog_cluster=OG0004117;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 220205 221398 1 - . ID=LTnewLM_300012000 LTnewLM_30 AUGUSTUS mRNA 220205 221398 1 - . ID=LTnewLM_300012000.1;Parent=LTnewLM_300012000 LTnewLM_30 AUGUSTUS CDS 220205 221398 1 - 0 ID=LTnewLM_300012000.1:CDS:1;Parent=LTnewLM_300012000.1 ### LTnewLM_30 . polypeptide 220205 221398 . - . ID=LTnewLM_300012000.1:pep;Derives_from=LTnewLM_300012000.1;orthologous_to=LmjF.30.0650_mRNA;ortholog_cluster=OG0004118;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 223432 225624 1 - . ID=LTnewLM_300012100 LTnewLM_30 AUGUSTUS mRNA 223432 225624 1 - . ID=LTnewLM_300012100.1;Parent=LTnewLM_300012100 LTnewLM_30 AUGUSTUS CDS 223432 225624 1 - 0 ID=LTnewLM_300012100.1:CDS:1;Parent=LTnewLM_300012100.1 ### LTnewLM_30 . polypeptide 223432 225624 . - . ID=LTnewLM_300012100.1:pep;Derives_from=LTnewLM_300012100.1;orthologous_to=LmjF.30.0660_mRNA;ortholog_cluster=OG0004119;product=term%3DPhosphatidylinositol-specific phospholipase C%2C X domain/PDZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00388|Pfam:PF00595|Pfam:PF13180|Pfam:PF17820;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 224143 224319 . - . Parent=LTnewLM_300012100.1:pep;Name=PF13180;signature_desc=PDZ domain;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 224176 224292 . - . Parent=LTnewLM_300012100.1:pep;Name=PF17820;signature_desc=PDZ domain LTnewLM_30 Pfam protein_match 224179 224343 . - . Parent=LTnewLM_300012100.1:pep;Name=PF00595;signature_desc=PDZ domain;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 224368 224634 . - . Parent=LTnewLM_300012100.1:pep;Name=PF00388;signature_desc=Phosphatidylinositol-specific phospholipase C%2C X domain ### LTnewLM_30 AUGUSTUS gene 226271 226471 1 - . ID=LTnewLM_300012200 LTnewLM_30 AUGUSTUS mRNA 226271 226471 1 - . ID=LTnewLM_300012200.1;Parent=LTnewLM_300012200 LTnewLM_30 AUGUSTUS CDS 226271 226471 1 - 0 ID=LTnewLM_300012200.1:CDS:1;Parent=LTnewLM_300012200.1 ### LTnewLM_30 . polypeptide 226271 226471 . - . ID=LTnewLM_300012200.1:pep;Derives_from=LTnewLM_300012200.1;orthologous_to=LTnewLM_300012300.1,LTnewLM_300012400.1,LTnewLM_300012500.1,LmjF.30.0670_mRNA,LmjF.30.0680_mRNA,LmjF.30.0690_mRNA;ortholog_cluster=OG0000042;product=term%3DRibosomal protein S30%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04758;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_30 Pfam protein_match 226295 226465 . - . Parent=LTnewLM_300012200.1:pep;Name=PF04758;signature_desc=Ribosomal protein S30;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 227103 227303 1 - . ID=LTnewLM_300012300 LTnewLM_30 AUGUSTUS mRNA 227103 227303 1 - . ID=LTnewLM_300012300.1;Parent=LTnewLM_300012300 LTnewLM_30 AUGUSTUS CDS 227103 227303 1 - 0 ID=LTnewLM_300012300.1:CDS:1;Parent=LTnewLM_300012300.1 ### LTnewLM_30 . polypeptide 227103 227303 . - . ID=LTnewLM_300012300.1:pep;Derives_from=LTnewLM_300012300.1;orthologous_to=LTnewLM_300012200.1,LTnewLM_300012400.1,LTnewLM_300012500.1,LmjF.30.0670_mRNA,LmjF.30.0680_mRNA,LmjF.30.0690_mRNA;ortholog_cluster=OG0000042;product=term%3DRibosomal protein S30%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04758;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_30 Pfam protein_match 227127 227297 . - . Parent=LTnewLM_300012300.1:pep;Name=PF04758;signature_desc=Ribosomal protein S30;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 227755 227955 1 - . ID=LTnewLM_300012400 LTnewLM_30 AUGUSTUS mRNA 227755 227955 1 - . ID=LTnewLM_300012400.1;Parent=LTnewLM_300012400 LTnewLM_30 AUGUSTUS CDS 227755 227955 1 - 0 ID=LTnewLM_300012400.1:CDS:1;Parent=LTnewLM_300012400.1 ### LTnewLM_30 . polypeptide 227755 227955 . - . ID=LTnewLM_300012400.1:pep;Derives_from=LTnewLM_300012400.1;orthologous_to=LTnewLM_300012200.1,LTnewLM_300012300.1,LTnewLM_300012500.1,LmjF.30.0670_mRNA,LmjF.30.0680_mRNA,LmjF.30.0690_mRNA;ortholog_cluster=OG0000042;product=term%3DRibosomal protein S30%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04758;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_30 Pfam protein_match 227779 227949 . - . Parent=LTnewLM_300012400.1:pep;Name=PF04758;signature_desc=Ribosomal protein S30;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 228409 228609 0.99 - . ID=LTnewLM_300012500 LTnewLM_30 AUGUSTUS mRNA 228409 228609 0.99 - . ID=LTnewLM_300012500.1;Parent=LTnewLM_300012500 LTnewLM_30 AUGUSTUS CDS 228409 228609 0.99 - 0 ID=LTnewLM_300012500.1:CDS:1;Parent=LTnewLM_300012500.1 ### LTnewLM_30 . polypeptide 228409 228609 . - . ID=LTnewLM_300012500.1:pep;Derives_from=LTnewLM_300012500.1;orthologous_to=LTnewLM_300012200.1,LTnewLM_300012300.1,LTnewLM_300012400.1,LmjF.30.0670_mRNA,LmjF.30.0680_mRNA,LmjF.30.0690_mRNA;ortholog_cluster=OG0000042;product=term%3DRibosomal protein S30%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04758;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_30 Pfam protein_match 228433 228603 . - . Parent=LTnewLM_300012500.1:pep;Name=PF04758;signature_desc=Ribosomal protein S30;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 228928 229413 1 - . ID=LTnewLM_300012600 LTnewLM_30 AUGUSTUS mRNA 228928 229413 1 - . ID=LTnewLM_300012600.1;Parent=LTnewLM_300012600 LTnewLM_30 AUGUSTUS CDS 228928 229413 1 - 0 ID=LTnewLM_300012600.1:CDS:1;Parent=LTnewLM_300012600.1 ### LTnewLM_30 . polypeptide 228928 229413 . - . ID=LTnewLM_300012600.1:pep;Derives_from=LTnewLM_300012600.1;orthologous_to=LmjF.30.0700_mRNA;ortholog_cluster=OG0004120;product=term%3DCS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04969 LTnewLM_30 Pfam protein_match 229117 229335 . - . Parent=LTnewLM_300012600.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_30 . polypeptide 229850 230482 . - . ID=LTnewLM_300012700.1:pep;Derives_from=LTnewLM_300012700.1;orthologous_to=LmjF.30.0705.1_mRNA;ortholog_cluster=OG0004121;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . polypeptide 229850 230647 . - . ID=LTnewLM_300012700.2:pep;Derives_from=LTnewLM_300012700.2;orthologous_to=LmjF.30.0705.2_mRNA;ortholog_cluster=OG0004122;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 229850 230663 . - . ID=LTnewLM_300012700;coverage=1.0;sequence_ID=0.964;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.30.0705_0 LTnewLM_30 Liftoff mRNA 229850 230575 . - . ID=LTnewLM_300012700.1;Parent=LTnewLM_300012700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 229850 230482 . - 0 ID=LTnewLM_300012700.1:CDS:1;Parent=LTnewLM_300012700.1;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 230483 230575 . - . ID=LTnewLM_300012700:five_prime_UTR;Parent=LTnewLM_300012700.1;extra_copy_number=0 LTnewLM_30 Liftoff mRNA 229850 230663 . - . ID=LTnewLM_300012700.2;Parent=LTnewLM_300012700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 229850 230647 . - 0 ID=LTnewLM_300012700.2:CDS:1;Parent=LTnewLM_300012700.2;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 230648 230663 . - . ID=LTnewLM_300012700:five_prime_UTR.1;Parent=LTnewLM_300012700.2;extra_copy_number=0 ### LTnewLM_30 AUGUSTUS gene 232111 233751 1 - . ID=LTnewLM_300012800 LTnewLM_30 AUGUSTUS mRNA 232111 233751 1 - . ID=LTnewLM_300012800.1;Parent=LTnewLM_300012800 LTnewLM_30 AUGUSTUS CDS 232111 233751 1 - 0 ID=LTnewLM_300012800.1:CDS:1;Parent=LTnewLM_300012800.1 ### LTnewLM_30 . polypeptide 232111 233751 . - . ID=LTnewLM_300012800.1:pep;Derives_from=LTnewLM_300012800.1;orthologous_to=LmjF.30.0710_mRNA;ortholog_cluster=OG0004123;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13424|Pfam:PF13176|Pfam:PF13181|Pfam:PF13174|Pfam:PF13432;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 232336 232422 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 232363 232518 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 232438 232524 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 232438 232524 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 232444 232524 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 232444 232650 . - . Parent=LTnewLM_300012800.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat ### LTnewLM_30 AUGUSTUS gene 238636 239469 1 + . ID=LTnewLM_300012900 LTnewLM_30 AUGUSTUS mRNA 238636 239469 1 + . ID=LTnewLM_300012900.1;Parent=LTnewLM_300012900 LTnewLM_30 AUGUSTUS CDS 238636 239469 1 + 0 ID=LTnewLM_300012900.1:CDS:1;Parent=LTnewLM_300012900.1 ### LTnewLM_30 . polypeptide 238636 239469 . + . ID=LTnewLM_300012900.1:pep;Derives_from=LTnewLM_300012900.1;orthologous_to=LmjF.30.0720_mRNA;ortholog_cluster=OG0004124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 239847 240506 1 + . ID=LTnewLM_300013000 LTnewLM_30 AUGUSTUS mRNA 239847 240506 1 + . ID=LTnewLM_300013000.1;Parent=LTnewLM_300013000 LTnewLM_30 AUGUSTUS CDS 239847 240506 1 + 0 ID=LTnewLM_300013000.1:CDS:1;Parent=LTnewLM_300013000.1 ### LTnewLM_30 . polypeptide 239847 240506 . + . ID=LTnewLM_300013000.1:pep;Derives_from=LTnewLM_300013000.1;orthologous_to=LmjF.30.0730_mRNA;ortholog_cluster=OG0004125;product=term%3DGrpE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01025;Ontology_term=GO:0006457,GO:0051087,GO:0000774,GO:0042803 LTnewLM_30 Pfam protein_match 239985 240494 . + . Parent=LTnewLM_300013000.1:pep;Name=PF01025;signature_desc=GrpE;Ontology_term=GO:0000774,GO:0042803,GO:0051087,GO:0006457 ### LTnewLM_30 AUGUSTUS gene 241319 241936 1 + . ID=LTnewLM_300013100 LTnewLM_30 AUGUSTUS mRNA 241319 241936 1 + . ID=LTnewLM_300013100.1;Parent=LTnewLM_300013100 LTnewLM_30 AUGUSTUS CDS 241319 241936 1 + 0 ID=LTnewLM_300013100.1:CDS:1;Parent=LTnewLM_300013100.1 ### LTnewLM_30 . polypeptide 241319 241936 . + . ID=LTnewLM_300013100.1:pep;Derives_from=LTnewLM_300013100.1;orthologous_to=LmjF.30.0735_mRNA;ortholog_cluster=OG0004126;product=term%3DGrpE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01025;Ontology_term=GO:0006457,GO:0051087,GO:0000774,GO:0042803 LTnewLM_30 Pfam protein_match 241421 241921 . + . Parent=LTnewLM_300013100.1:pep;Name=PF01025;signature_desc=GrpE;Ontology_term=GO:0000774,GO:0042803,GO:0051087,GO:0006457 ### LTnewLM_30 AUGUSTUS gene 242241 242756 1 + . ID=LTnewLM_300013200 LTnewLM_30 AUGUSTUS mRNA 242241 242756 1 + . ID=LTnewLM_300013200.1;Parent=LTnewLM_300013200 LTnewLM_30 AUGUSTUS CDS 242241 242756 1 + 0 ID=LTnewLM_300013200.1:CDS:1;Parent=LTnewLM_300013200.1 ### LTnewLM_30 . polypeptide 242241 242756 . + . ID=LTnewLM_300013200.1:pep;Derives_from=LTnewLM_300013200.1;orthologous_to=LmjF.30.0740_mRNA;ortholog_cluster=OG0004127;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 243055 243894 1 + . ID=LTnewLM_300013300 LTnewLM_30 AUGUSTUS mRNA 243055 243894 1 + . ID=LTnewLM_300013300.1;Parent=LTnewLM_300013300 LTnewLM_30 AUGUSTUS CDS 243055 243894 1 + 0 ID=LTnewLM_300013300.1:CDS:1;Parent=LTnewLM_300013300.1 ### LTnewLM_30 . polypeptide 243055 243894 . + . ID=LTnewLM_300013300.1:pep;Derives_from=LTnewLM_300013300.1;orthologous_to=LmjF.30.0745_mRNA;ortholog_cluster=OG0004128;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 244244 244834 1 + . ID=LTnewLM_300013400 LTnewLM_30 AUGUSTUS mRNA 244244 244834 1 + . ID=LTnewLM_300013400.1;Parent=LTnewLM_300013400 LTnewLM_30 AUGUSTUS CDS 244244 244834 1 + 0 ID=LTnewLM_300013400.1:CDS:1;Parent=LTnewLM_300013400.1 ### LTnewLM_30 . polypeptide 244244 244834 . + . ID=LTnewLM_300013400.1:pep;Derives_from=LTnewLM_300013400.1;orthologous_to=LmjF.30.0750_mRNA;ortholog_cluster=OG0004129;product=term%3DDJ-1/PfpI family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01965 LTnewLM_30 Pfam protein_match 244247 244735 . + . Parent=LTnewLM_300013400.1:pep;Name=PF01965;signature_desc=DJ-1/PfpI family ### LTnewLM_30 AUGUSTUS gene 245698 249111 1 + . ID=LTnewLM_300013500 LTnewLM_30 AUGUSTUS mRNA 245698 249111 1 + . ID=LTnewLM_300013500.1;Parent=LTnewLM_300013500 LTnewLM_30 AUGUSTUS CDS 245698 249111 1 + 0 ID=LTnewLM_300013500.1:CDS:1;Parent=LTnewLM_300013500.1 ### LTnewLM_30 . polypeptide 245698 249111 . + . ID=LTnewLM_300013500.1:pep;Derives_from=LTnewLM_300013500.1;orthologous_to=LmjF.30.0760_mRNA;ortholog_cluster=OG0004130;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 250144 250518 1 + . ID=LTnewLM_300013600 LTnewLM_30 AUGUSTUS mRNA 250144 250518 1 + . ID=LTnewLM_300013600.1;Parent=LTnewLM_300013600 LTnewLM_30 AUGUSTUS CDS 250144 250518 1 + 0 ID=LTnewLM_300013600.1:CDS:1;Parent=LTnewLM_300013600.1 ### LTnewLM_30 . polypeptide 250144 250518 . + . ID=LTnewLM_300013600.1:pep;Derives_from=LTnewLM_300013600.1;orthologous_to=LmjF.30.0770_mRNA;ortholog_cluster=OG0004131;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 251278 253248 1 + . ID=LTnewLM_300013700 LTnewLM_30 AUGUSTUS mRNA 251278 253248 1 + . ID=LTnewLM_300013700.1;Parent=LTnewLM_300013700 LTnewLM_30 AUGUSTUS CDS 251278 253248 1 + 0 ID=LTnewLM_300013700.1:CDS:1;Parent=LTnewLM_300013700.1 ### LTnewLM_30 . polypeptide 251278 253248 . + . ID=LTnewLM_300013700.1:pep;Derives_from=LTnewLM_300013700.1;orthologous_to=LmjF.30.0780_mRNA;ortholog_cluster=OG0004132;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 254442 255719 1 + . ID=LTnewLM_300013800 LTnewLM_30 AUGUSTUS mRNA 254442 255719 1 + . ID=LTnewLM_300013800.1;Parent=LTnewLM_300013800 LTnewLM_30 AUGUSTUS CDS 254442 255719 1 + 0 ID=LTnewLM_300013800.1:CDS:1;Parent=LTnewLM_300013800.1 ### LTnewLM_30 . polypeptide 254442 255719 . + . ID=LTnewLM_300013800.1:pep;Derives_from=LTnewLM_300013800.1;orthologous_to=LmjF.30.0790_mRNA;ortholog_cluster=OG0004133;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 257699 259231 1 + . ID=LTnewLM_300013900 LTnewLM_30 AUGUSTUS mRNA 257699 259231 1 + . ID=LTnewLM_300013900.1;Parent=LTnewLM_300013900 LTnewLM_30 AUGUSTUS CDS 257699 259231 1 + 0 ID=LTnewLM_300013900.1:CDS:1;Parent=LTnewLM_300013900.1 ### LTnewLM_30 . polypeptide 257699 259231 . + . ID=LTnewLM_300013900.1:pep;Derives_from=LTnewLM_300013900.1;orthologous_to=LmjF.30.0800_mRNA;ortholog_cluster=OG0004134;product=term%3DPH domain/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00169|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 257699 257962 . + . Parent=LTnewLM_300013900.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_30 Pfam protein_match 258017 258757 . + . Parent=LTnewLM_300013900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 258029 258739 . + . Parent=LTnewLM_300013900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 262933 263529 1 + . ID=LTnewLM_300014000 LTnewLM_30 AUGUSTUS mRNA 262933 263529 1 + . ID=LTnewLM_300014000.1;Parent=LTnewLM_300014000 LTnewLM_30 AUGUSTUS CDS 262933 263529 1 + 0 ID=LTnewLM_300014000.1:CDS:1;Parent=LTnewLM_300014000.1 ### LTnewLM_30 . polypeptide 262933 263529 . + . ID=LTnewLM_300014000.1:pep;Derives_from=LTnewLM_300014000.1;orthologous_to=LmjF.30.0805_mRNA;ortholog_cluster=OG0004135;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 264126 264875 1 + . ID=LTnewLM_300014100 LTnewLM_30 AUGUSTUS mRNA 264126 264875 1 + . ID=LTnewLM_300014100.1;Parent=LTnewLM_300014100 LTnewLM_30 AUGUSTUS CDS 264126 264875 1 + 0 ID=LTnewLM_300014100.1:CDS:1;Parent=LTnewLM_300014100.1 ### LTnewLM_30 . polypeptide 264126 264875 . + . ID=LTnewLM_300014100.1:pep;Derives_from=LTnewLM_300014100.1;orthologous_to=LmjF.30.0808_mRNA;ortholog_cluster=OG0004136;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 266130 266882 1 + . ID=LTnewLM_300014200 LTnewLM_30 AUGUSTUS mRNA 266130 266882 1 + . ID=LTnewLM_300014200.1;Parent=LTnewLM_300014200 LTnewLM_30 AUGUSTUS CDS 266130 266882 1 + 0 ID=LTnewLM_300014200.1:CDS:1;Parent=LTnewLM_300014200.1 ### LTnewLM_30 . polypeptide 266130 266882 . + . ID=LTnewLM_300014200.1:pep;Derives_from=LTnewLM_300014200.1;orthologous_to=LmjF.30.0810_mRNA;ortholog_cluster=OG0004137;product=term%3DAdoMet dependent proline di-methyltransferase/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05891|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0006480,GO:0008152,GO:0008168 LTnewLM_30 Pfam protein_match 266256 266876 . + . Parent=LTnewLM_300014200.1:pep;Name=PF05891;signature_desc=AdoMet dependent proline di-methyltransferase;Ontology_term=GO:0008168,GO:0006480 LTnewLM_30 Pfam protein_match 266409 266687 . + . Parent=LTnewLM_300014200.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_30 Pfam protein_match 266409 266699 . + . Parent=LTnewLM_300014200.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_30 AUGUSTUS gene 267853 270168 1 + . ID=LTnewLM_300014300 LTnewLM_30 AUGUSTUS mRNA 267853 270168 1 + . ID=LTnewLM_300014300.1;Parent=LTnewLM_300014300 LTnewLM_30 AUGUSTUS CDS 267853 270168 1 + 0 ID=LTnewLM_300014300.1:CDS:1;Parent=LTnewLM_300014300.1 ### LTnewLM_30 . polypeptide 267853 270168 . + . ID=LTnewLM_300014300.1:pep;Derives_from=LTnewLM_300014300.1;orthologous_to=LmjF.30.0820_mRNA;ortholog_cluster=OG0004138;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . pseudogene 272738 273852 . + . ID=LTnewLM_300014400:pseudogene;coverage=0.966;sequence_ID=0.906;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.0830_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 272738 273852 . + . ID=LTnewLM_300014400.1;Parent=LTnewLM_300014400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 273120 273852 . + . ID=LTnewLM_300014400.1:pseudogenic_exon:1;Parent=LTnewLM_300014400.1;extra_copy_number=0 LTnewLM_30 . pseudogenic_transcript 273267 273852 . + . ID=LTnewLM_300014400.2;Parent=LTnewLM_300014400:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 273412 273852 . + . ID=LTnewLM_300014400.2:pseudogenic_exon:1;Parent=LTnewLM_300014400.2;extra_copy_number=0 ### LTnewLM_30 . polypeptide 273120 273852 . + . ID=LTnewLM_300014400.1:pep;Derives_from=LTnewLM_300014400.1;product=term%3Dhypothetical protein ### LTnewLM_30 . polypeptide 273412 273852 . + . ID=LTnewLM_300014400.2:pep;Derives_from=LTnewLM_300014400.2;orthologous_to=LmjF.30.0830.2_mRNA;ortholog_cluster=OG0007588;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01920;Ontology_term=GO:0051082,GO:0006457,GO:0016272 LTnewLM_30 Pfam protein_match 273484 273768 . + . Parent=LTnewLM_300014400.2:pep;Name=PF01920;signature_desc=Prefoldin subunit;Ontology_term=GO:0051082,GO:0006457,GO:0016272 ### LTnewLM_30 AUGUSTUS gene 274759 277752 1 + . ID=LTnewLM_300014500 LTnewLM_30 AUGUSTUS mRNA 274759 277752 1 + . ID=LTnewLM_300014500.1;Parent=LTnewLM_300014500 LTnewLM_30 AUGUSTUS CDS 274759 277752 1 + 0 ID=LTnewLM_300014500.1:CDS:1;Parent=LTnewLM_300014500.1 ### LTnewLM_30 . polypeptide 274759 277752 . + . ID=LTnewLM_300014500.1:pep;Derives_from=LTnewLM_300014500.1;orthologous_to=LmjF.30.0840_mRNA;ortholog_cluster=OG0004139;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 278605 279201 1 + . ID=LTnewLM_300014600 LTnewLM_30 AUGUSTUS mRNA 278605 279201 1 + . ID=LTnewLM_300014600.1;Parent=LTnewLM_300014600 LTnewLM_30 AUGUSTUS CDS 278605 279201 1 + 0 ID=LTnewLM_300014600.1:CDS:1;Parent=LTnewLM_300014600.1 ### LTnewLM_30 . polypeptide 278605 279201 . + . ID=LTnewLM_300014600.1:pep;Derives_from=LTnewLM_300014600.1;orthologous_to=LTnewLM_300014700.1,LmjF.30.0850_mRNA,LmjF.30.0860_mRNA;ortholog_cluster=OG0000210;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_30 Pfam protein_match 278662 279186 . + . Parent=LTnewLM_300014600.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_30 AUGUSTUS gene 280691 281287 1 + . ID=LTnewLM_300014700 LTnewLM_30 AUGUSTUS mRNA 280691 281287 1 + . ID=LTnewLM_300014700.1;Parent=LTnewLM_300014700 LTnewLM_30 AUGUSTUS CDS 280691 281287 1 + 0 ID=LTnewLM_300014700.1:CDS:1;Parent=LTnewLM_300014700.1 ### LTnewLM_30 . polypeptide 280691 281287 . + . ID=LTnewLM_300014700.1:pep;Derives_from=LTnewLM_300014700.1;orthologous_to=LTnewLM_300014600.1,LmjF.30.0850_mRNA,LmjF.30.0860_mRNA;ortholog_cluster=OG0000210;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_30 Pfam protein_match 280748 281272 . + . Parent=LTnewLM_300014700.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_30 AUGUSTUS gene 284418 285086 1 + . ID=LTnewLM_300014800 LTnewLM_30 AUGUSTUS mRNA 284418 285086 1 + . ID=LTnewLM_300014800.1;Parent=LTnewLM_300014800 LTnewLM_30 AUGUSTUS CDS 284418 285086 1 + 0 ID=LTnewLM_300014800.1:CDS:1;Parent=LTnewLM_300014800.1 ### LTnewLM_30 . polypeptide 284418 285086 . + . ID=LTnewLM_300014800.1:pep;Derives_from=LTnewLM_300014800.1;orthologous_to=LmjF.30.0870_mRNA;ortholog_cluster=OG0004140;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_30 Pfam protein_match 284493 284984 . + . Parent=LTnewLM_300014800.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_30 AUGUSTUS gene 288272 289309 1 + . ID=LTnewLM_300014900 LTnewLM_30 AUGUSTUS mRNA 288272 289309 1 + . ID=LTnewLM_300014900.1;Parent=LTnewLM_300014900 LTnewLM_30 AUGUSTUS CDS 288272 289309 1 + 0 ID=LTnewLM_300014900.1:CDS:1;Parent=LTnewLM_300014900.1 ### LTnewLM_30 . polypeptide 288272 289309 . + . ID=LTnewLM_300014900.1:pep;Derives_from=LTnewLM_300014900.1;orthologous_to=LmjF.30.0880_mRNA;ortholog_cluster=OG0004141;product=term%3DpfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294 LTnewLM_30 Pfam protein_match 288398 289282 . + . Parent=LTnewLM_300014900.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_30 . polypeptide 292139 292783 . + . ID=LTnewLM_300015000.1:pep;Derives_from=LTnewLM_300015000.1;orthologous_to=LTnewLM_300015000.2,LmjF.30.0890_mRNA;ortholog_cluster=OG0000430;product=term%3DpfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294 LTnewLM_30 Pfam protein_match 292142 292756 . + . Parent=LTnewLM_300015000.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_30 AUGUSTUS gene 292139 292969 1.14 + . ID=LTnewLM_300015000 LTnewLM_30 AUGUSTUS mRNA 292139 292783 1 + . ID=LTnewLM_300015000.1;Parent=LTnewLM_300015000 LTnewLM_30 AUGUSTUS CDS 292139 292783 1 + 0 ID=LTnewLM_300015000.1:CDS:1;Parent=LTnewLM_300015000.1 LTnewLM_30 AUGUSTUS mRNA 292139 292969 0.14 + . ID=LTnewLM_300015000.2;Parent=LTnewLM_300015000 LTnewLM_30 AUGUSTUS CDS 292139 292748 0.21 + 0 ID=LTnewLM_300015000.2:CDS:1;Parent=LTnewLM_300015000.2 LTnewLM_30 AUGUSTUS CDS 292803 292969 0.3 + 2 ID=LTnewLM_300015000.2:CDS:2;Parent=LTnewLM_300015000.2 ### LTnewLM_30 . polypeptide 292139 292969 . + . ID=LTnewLM_300015000.2:pep;Derives_from=LTnewLM_300015000.2;orthologous_to=LTnewLM_300015000.1,LmjF.30.0890_mRNA;ortholog_cluster=OG0000430;product=term%3DpfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294 LTnewLM_30 Pfam protein_match 292142 292741 . + . Parent=LTnewLM_300015000.2:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_30 AUGUSTUS gene 297386 299458 1 + . ID=LTnewLM_300015100 LTnewLM_30 AUGUSTUS mRNA 297386 299458 1 + . ID=LTnewLM_300015100.1;Parent=LTnewLM_300015100 LTnewLM_30 AUGUSTUS CDS 297386 299458 1 + 0 ID=LTnewLM_300015100.1:CDS:1;Parent=LTnewLM_300015100.1 ### LTnewLM_30 . polypeptide 297386 299458 . + . ID=LTnewLM_300015100.1:pep;Derives_from=LTnewLM_300015100.1;orthologous_to=LmjF.30.0900_mRNA;ortholog_cluster=OG0004142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 302061 306266 1 + . ID=LTnewLM_300015200 LTnewLM_30 AUGUSTUS mRNA 302061 306266 1 + . ID=LTnewLM_300015200.1;Parent=LTnewLM_300015200 LTnewLM_30 AUGUSTUS CDS 302061 306266 1 + 0 ID=LTnewLM_300015200.1:CDS:1;Parent=LTnewLM_300015200.1 ### LTnewLM_30 . polypeptide 302061 306266 . + . ID=LTnewLM_300015200.1:pep;Derives_from=LTnewLM_300015200.1;orthologous_to=LmjF.30.0910_mRNA;ortholog_cluster=OG0004143;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_30 Pfam protein_match 305337 306260 . + . Parent=LTnewLM_300015200.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_30 AUGUSTUS gene 307717 310530 1 + . ID=LTnewLM_300015300 LTnewLM_30 AUGUSTUS mRNA 307717 310530 1 + . ID=LTnewLM_300015300.1;Parent=LTnewLM_300015300 LTnewLM_30 AUGUSTUS CDS 307717 310530 1 + 0 ID=LTnewLM_300015300.1:CDS:1;Parent=LTnewLM_300015300.1 ### LTnewLM_30 . polypeptide 307717 310530 . + . ID=LTnewLM_300015300.1:pep;Derives_from=LTnewLM_300015300.1;orthologous_to=LmjF.30.0920_mRNA;ortholog_cluster=OG0004144;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 312154 313893 1 + . ID=LTnewLM_300015400 LTnewLM_30 AUGUSTUS mRNA 312154 313893 1 + . ID=LTnewLM_300015400.1;Parent=LTnewLM_300015400 LTnewLM_30 AUGUSTUS CDS 312154 313893 1 + 0 ID=LTnewLM_300015400.1:CDS:1;Parent=LTnewLM_300015400.1 ### LTnewLM_30 . polypeptide 312154 313893 . + . ID=LTnewLM_300015400.1:pep;Derives_from=LTnewLM_300015400.1;orthologous_to=LmjF.30.0930_mRNA;ortholog_cluster=OG0004145;product=term%3DDomain of unknown function (DUF4139)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13598 LTnewLM_30 Pfam protein_match 312841 313860 . + . Parent=LTnewLM_300015400.1:pep;Name=PF13598;signature_desc=Domain of unknown function (DUF4139) ### LTnewLM_30 AUGUSTUS gene 316092 318377 1 + . ID=LTnewLM_300015500 LTnewLM_30 AUGUSTUS mRNA 316092 318377 1 + . ID=LTnewLM_300015500.1;Parent=LTnewLM_300015500 LTnewLM_30 AUGUSTUS CDS 316092 318377 1 + 0 ID=LTnewLM_300015500.1:CDS:1;Parent=LTnewLM_300015500.1 ### LTnewLM_30 . polypeptide 316092 318377 . + . ID=LTnewLM_300015500.1:pep;Derives_from=LTnewLM_300015500.1;orthologous_to=LmjF.30.0940_mRNA;ortholog_cluster=OG0004146;product=term%3DGamma tubulin complex component C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04130;Ontology_term=GO:0000922,GO:0005815,GO:0000226 LTnewLM_30 Pfam protein_match 317091 318191 . + . Parent=LTnewLM_300015500.1:pep;Name=PF04130;signature_desc=Gamma tubulin complex component C-terminal;Ontology_term=GO:0000226,GO:0000922,GO:0005815 ### LTnewLM_30 AUGUSTUS gene 319398 321344 1 + . ID=LTnewLM_300015600 LTnewLM_30 AUGUSTUS mRNA 319398 321344 1 + . ID=LTnewLM_300015600.1;Parent=LTnewLM_300015600 LTnewLM_30 AUGUSTUS CDS 319398 321344 1 + 0 ID=LTnewLM_300015600.1:CDS:1;Parent=LTnewLM_300015600.1 ### LTnewLM_30 . polypeptide 319398 321344 . + . ID=LTnewLM_300015600.1:pep;Derives_from=LTnewLM_300015600.1;orthologous_to=LmjF.30.0950_mRNA;ortholog_cluster=OG0004147;product=term%3DHistone-binding protein RBBP4 or subunit C of CAF1 complex/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12265|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 320064 320264 . + . Parent=LTnewLM_300015600.1:pep;Name=PF12265;signature_desc=Histone-binding protein RBBP4 or subunit C of CAF1 complex LTnewLM_30 Pfam protein_match 320742 320855 . + . Parent=LTnewLM_300015600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 325657 327420 0.84 + . ID=LTnewLM_300015700 LTnewLM_30 AUGUSTUS mRNA 325657 327420 0.84 + . ID=LTnewLM_300015700.1;Parent=LTnewLM_300015700 LTnewLM_30 AUGUSTUS CDS 325657 327420 0.84 + 0 ID=LTnewLM_300015700.1:CDS:1;Parent=LTnewLM_300015700.1 ### LTnewLM_30 . polypeptide 325657 327420 . + . ID=LTnewLM_300015700.1:pep;Derives_from=LTnewLM_300015700.1;orthologous_to=LmjF.30.0960_mRNA;ortholog_cluster=OG0004148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 328414 329115 1 + . ID=LTnewLM_300015800 LTnewLM_30 AUGUSTUS mRNA 328414 329115 1 + . ID=LTnewLM_300015800.1;Parent=LTnewLM_300015800 LTnewLM_30 AUGUSTUS CDS 328414 329115 1 + 0 ID=LTnewLM_300015800.1:CDS:1;Parent=LTnewLM_300015800.1 ### LTnewLM_30 . polypeptide 328414 329115 . + . ID=LTnewLM_300015800.1:pep;Derives_from=LTnewLM_300015800.1;orthologous_to=LmjF.30.0970_mRNA;ortholog_cluster=OG0004149;product=term%3DMitochondrial glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02330;Ontology_term=GO:0005759 LTnewLM_30 Pfam protein_match 328756 329103 . + . Parent=LTnewLM_300015800.1:pep;Name=PF02330;signature_desc=Mitochondrial glycoprotein;Ontology_term=GO:0005759 ### LTnewLM_30 AUGUSTUS gene 330697 332199 1 + . ID=LTnewLM_300015900 LTnewLM_30 AUGUSTUS mRNA 330697 332199 1 + . ID=LTnewLM_300015900.1;Parent=LTnewLM_300015900 LTnewLM_30 AUGUSTUS CDS 330697 332199 1 + 0 ID=LTnewLM_300015900.1:CDS:1;Parent=LTnewLM_300015900.1 ### LTnewLM_30 . polypeptide 330697 332199 . + . ID=LTnewLM_300015900.1:pep;Derives_from=LTnewLM_300015900.1;orthologous_to=LmjF.30.0980_mRNA;ortholog_cluster=OG0004150;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 333337 335475 1 + . ID=LTnewLM_300016000 LTnewLM_30 AUGUSTUS mRNA 333337 335475 1 + . ID=LTnewLM_300016000.1;Parent=LTnewLM_300016000 LTnewLM_30 AUGUSTUS CDS 333337 335475 1 + 0 ID=LTnewLM_300016000.1:CDS:1;Parent=LTnewLM_300016000.1 ### LTnewLM_30 . polypeptide 333337 335475 . + . ID=LTnewLM_300016000.1:pep;Derives_from=LTnewLM_300016000.1;orthologous_to=LmjF.30.0990_mRNA;ortholog_cluster=OG0004151;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 336077 337912 1 + . ID=LTnewLM_300016100 LTnewLM_30 AUGUSTUS mRNA 336077 337912 1 + . ID=LTnewLM_300016100.1;Parent=LTnewLM_300016100 LTnewLM_30 AUGUSTUS CDS 336077 337912 1 + 0 ID=LTnewLM_300016100.1:CDS:1;Parent=LTnewLM_300016100.1 ### LTnewLM_30 . polypeptide 336077 337912 . + . ID=LTnewLM_300016100.1:pep;Derives_from=LTnewLM_300016100.1;orthologous_to=LmjF.30.1000_mRNA;ortholog_cluster=OG0004152;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 336167 336784 . + . Parent=LTnewLM_300016100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 336170 336460 . + . Parent=LTnewLM_300016100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 336983 337324 . + . Parent=LTnewLM_300016100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 337007 337186 . + . Parent=LTnewLM_300016100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 339080 342148 1 + . ID=LTnewLM_300016200 LTnewLM_30 AUGUSTUS mRNA 339080 342148 1 + . ID=LTnewLM_300016200.1;Parent=LTnewLM_300016200 LTnewLM_30 AUGUSTUS CDS 339080 342148 1 + 0 ID=LTnewLM_300016200.1:CDS:1;Parent=LTnewLM_300016200.1 ### LTnewLM_30 . polypeptide 339080 342148 . + . ID=LTnewLM_300016200.1:pep;Derives_from=LTnewLM_300016200.1;orthologous_to=LmjF.30.1010_mRNA;ortholog_cluster=OG0004153;product=term%3DThioredoxin/OST3 / OST6 family%2C transporter family/Ubiquitin elongating factor core%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF04756|Pfam:PF10408;Ontology_term=GO:0016567,GO:0006511,GO:0045454,GO:0000151,GO:0034450 LTnewLM_30 Pfam protein_match 339128 339352 . + . Parent=LTnewLM_300016200.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_30 Pfam protein_match 339167 339331 . + . Parent=LTnewLM_300016200.1:pep;Name=PF04756;signature_desc=OST3 / OST6 family%2C transporter family LTnewLM_30 Pfam protein_match 339902 341818 . + . Parent=LTnewLM_300016200.1:pep;Name=PF10408;signature_desc=Ubiquitin elongating factor core;Ontology_term=GO:0034450,GO:0006511,GO:0016567,GO:0000151 ### LTnewLM_30 AUGUSTUS gene 343911 345527 1 + . ID=LTnewLM_300016300 LTnewLM_30 AUGUSTUS mRNA 343911 345527 1 + . ID=LTnewLM_300016300.1;Parent=LTnewLM_300016300 LTnewLM_30 AUGUSTUS CDS 343911 345527 1 + 0 ID=LTnewLM_300016300.1:CDS:1;Parent=LTnewLM_300016300.1 ### LTnewLM_30 . polypeptide 343911 345527 . + . ID=LTnewLM_300016300.1:pep;Derives_from=LTnewLM_300016300.1;orthologous_to=LmjF.30.1020_mRNA;ortholog_cluster=OG0004154;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 346272 347540 1 + . ID=LTnewLM_300016400 LTnewLM_30 AUGUSTUS mRNA 346272 347540 1 + . ID=LTnewLM_300016400.1;Parent=LTnewLM_300016400 LTnewLM_30 AUGUSTUS CDS 346272 347540 1 + 0 ID=LTnewLM_300016400.1:CDS:1;Parent=LTnewLM_300016400.1 ### LTnewLM_30 . polypeptide 346272 347540 . + . ID=LTnewLM_300016400.1:pep;Derives_from=LTnewLM_300016400.1;orthologous_to=LmjF.30.1030_mRNA;ortholog_cluster=OG0004155;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_30 Pfam protein_match 346479 346670 . + . Parent=LTnewLM_300016400.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_30 Liftoff gene 348449 349219 . + . ID=LTnewLM_300016500;coverage=1.0;sequence_ID=0.971;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.1040_0 LTnewLM_30 Liftoff mRNA 348449 349219 . + . ID=LTnewLM_300016500.1;Parent=LTnewLM_300016500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 348449 349219 . + 0 ID=LTnewLM_300016500.1:CDS:1;Parent=LTnewLM_300016500.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 348449 349219 . + . ID=LTnewLM_300016500.1:pep;Derives_from=LTnewLM_300016500.1;orthologous_to=LmjF.30.1040_mRNA;ortholog_cluster=OG0004156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 351157 352173 1 + . ID=LTnewLM_300016600 LTnewLM_30 AUGUSTUS mRNA 351157 352173 1 + . ID=LTnewLM_300016600.1;Parent=LTnewLM_300016600 LTnewLM_30 AUGUSTUS CDS 351157 352173 1 + 0 ID=LTnewLM_300016600.1:CDS:1;Parent=LTnewLM_300016600.1 ### LTnewLM_30 . polypeptide 351157 352173 . + . ID=LTnewLM_300016600.1:pep;Derives_from=LTnewLM_300016600.1;orthologous_to=LmjF.30.1050_mRNA;ortholog_cluster=OG0004157;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_30 Pfam protein_match 351172 351420 . + . Parent=LTnewLM_300016600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_30 Pfam protein_match 351466 351771 . + . Parent=LTnewLM_300016600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_30 Pfam protein_match 351814 352065 . + . Parent=LTnewLM_300016600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_30 AUGUSTUS gene 353295 353903 1 + . ID=LTnewLM_300016700 LTnewLM_30 AUGUSTUS mRNA 353295 353903 1 + . ID=LTnewLM_300016700.1;Parent=LTnewLM_300016700 LTnewLM_30 AUGUSTUS CDS 353295 353903 1 + 0 ID=LTnewLM_300016700.1:CDS:1;Parent=LTnewLM_300016700.1 ### LTnewLM_30 . polypeptide 353295 353903 . + . ID=LTnewLM_300016700.1:pep;Derives_from=LTnewLM_300016700.1;orthologous_to=LmjF.30.1060_mRNA;ortholog_cluster=OG0004158;product=term%3DRF-1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00472;Ontology_term=GO:0006415,GO:0003747 LTnewLM_30 Pfam protein_match 353487 353849 . + . Parent=LTnewLM_300016700.1:pep;Name=PF00472;signature_desc=RF-1 domain;Ontology_term=GO:0003747,GO:0006415 ### LTnewLM_30 AUGUSTUS gene 354724 355428 1 + . ID=LTnewLM_300016800 LTnewLM_30 AUGUSTUS mRNA 354724 355428 1 + . ID=LTnewLM_300016800.1;Parent=LTnewLM_300016800 LTnewLM_30 AUGUSTUS CDS 354724 355428 1 + 0 ID=LTnewLM_300016800.1:CDS:1;Parent=LTnewLM_300016800.1 ### LTnewLM_30 . polypeptide 354724 355428 . + . ID=LTnewLM_300016800.1:pep;Derives_from=LTnewLM_300016800.1;orthologous_to=LmjF.30.1070_mRNA;ortholog_cluster=OG0004159;product=term%3DFlavinator of succinate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03937 LTnewLM_30 Pfam protein_match 355165 355386 . + . Parent=LTnewLM_300016800.1:pep;Name=PF03937;signature_desc=Flavinator of succinate dehydrogenase ### LTnewLM_30 Liftoff gene 359672 367570 . + . ID=LTnewLM_300016900;coverage=0.996;sequence_ID=0.908;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.1080_0 LTnewLM_30 Liftoff mRNA 359672 367570 . + . ID=LTnewLM_300016900.1;Parent=LTnewLM_300016900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 359672 367570 . + 0 ID=LTnewLM_300016900.1:CDS:1;Parent=LTnewLM_300016900.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 359672 367570 . + . ID=LTnewLM_300016900.1:pep;Derives_from=LTnewLM_300016900.1;orthologous_to=LmjF.30.1080_mRNA;ortholog_cluster=OG0004160;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 367436 367495 . + . Parent=LTnewLM_300016900.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 369756 373265 1 + . ID=LTnewLM_300017000 LTnewLM_30 AUGUSTUS mRNA 369756 373265 1 + . ID=LTnewLM_300017000.1;Parent=LTnewLM_300017000 LTnewLM_30 AUGUSTUS CDS 369756 373265 1 + 0 ID=LTnewLM_300017000.1:CDS:1;Parent=LTnewLM_300017000.1 ### LTnewLM_30 . polypeptide 369756 373265 . + . ID=LTnewLM_300017000.1:pep;Derives_from=LTnewLM_300017000.1;orthologous_to=LmjF.30.1090_mRNA;ortholog_cluster=OG0004161;product=term%3DWW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 371718 371804 . + . Parent=LTnewLM_300017000.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 375198 376121 1 + . ID=LTnewLM_300017100 LTnewLM_30 AUGUSTUS mRNA 375198 376121 1 + . ID=LTnewLM_300017100.1;Parent=LTnewLM_300017100 LTnewLM_30 AUGUSTUS CDS 375198 376121 1 + 0 ID=LTnewLM_300017100.1:CDS:1;Parent=LTnewLM_300017100.1 ### LTnewLM_30 . polypeptide 375198 376121 . + . ID=LTnewLM_300017100.1:pep;Derives_from=LTnewLM_300017100.1;orthologous_to=LmjF.30.1100_mRNA;ortholog_cluster=OG0004162;product=term%3DDREV methyltransferase/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05219|Pfam:PF13489|Pfam:PF13649|Pfam:PF08242|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_30 Pfam protein_match 375264 376091 . + . Parent=LTnewLM_300017100.1:pep;Name=PF05219;signature_desc=DREV methyltransferase LTnewLM_30 Pfam protein_match 375516 375848 . + . Parent=LTnewLM_300017100.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_30 Pfam protein_match 375552 375824 . + . Parent=LTnewLM_300017100.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_30 Pfam protein_match 375552 375830 . + . Parent=LTnewLM_300017100.1:pep;Name=PF08242;signature_desc=Methyltransferase domain LTnewLM_30 Pfam protein_match 375552 375836 . + . Parent=LTnewLM_300017100.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_30 AUGUSTUS gene 379221 381803 1 + . ID=LTnewLM_300017200 LTnewLM_30 AUGUSTUS mRNA 379221 381803 1 + . ID=LTnewLM_300017200.1;Parent=LTnewLM_300017200 LTnewLM_30 AUGUSTUS CDS 379221 381803 1 + 0 ID=LTnewLM_300017200.1:CDS:1;Parent=LTnewLM_300017200.1 ### LTnewLM_30 . polypeptide 379221 381803 . + . ID=LTnewLM_300017200.1:pep;Derives_from=LTnewLM_300017200.1;orthologous_to=LmjF.30.1110_mRNA;ortholog_cluster=OG0004163;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 380418 380597 . + . Parent=LTnewLM_300017200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 380766 380957 . + . Parent=LTnewLM_300017200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 390748 392367 1 + . ID=LTnewLM_300017300 LTnewLM_30 AUGUSTUS mRNA 390748 392367 1 + . ID=LTnewLM_300017300.1;Parent=LTnewLM_300017300 LTnewLM_30 AUGUSTUS CDS 390748 392367 1 + 0 ID=LTnewLM_300017300.1:CDS:1;Parent=LTnewLM_300017300.1 ### LTnewLM_30 . polypeptide 390748 392367 . + . ID=LTnewLM_300017300.1:pep;Derives_from=LTnewLM_300017300.1;orthologous_to=LmjF.30.1120_mRNA;ortholog_cluster=OG0004164;product=term%3DArmadillo/beta-catenin-like repeat/Atypical Arm repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00514|Pfam:PF16186;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391099 391215 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391222 391338 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391357 391473 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391513 391593 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391612 391722 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391729 391848 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 391861 391971 . + . Parent=LTnewLM_300017300.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 392146 392277 . + . Parent=LTnewLM_300017300.1:pep;Name=PF16186;signature_desc=Atypical Arm repeat ### LTnewLM_30 AUGUSTUS gene 395173 395457 1 + . ID=LTnewLM_300017400 LTnewLM_30 AUGUSTUS mRNA 395173 395457 1 + . ID=LTnewLM_300017400.1;Parent=LTnewLM_300017400 LTnewLM_30 AUGUSTUS CDS 395173 395457 1 + 0 ID=LTnewLM_300017400.1:CDS:1;Parent=LTnewLM_300017400.1 ### LTnewLM_30 . polypeptide 395173 395457 . + . ID=LTnewLM_300017400.1:pep;Derives_from=LTnewLM_300017400.1;orthologous_to=LmjF.30.1130_mRNA;ortholog_cluster=OG0004165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 396432 396983 1 + . ID=LTnewLM_300017500 LTnewLM_30 AUGUSTUS mRNA 396432 396983 1 + . ID=LTnewLM_300017500.1;Parent=LTnewLM_300017500 LTnewLM_30 AUGUSTUS CDS 396432 396983 1 + 0 ID=LTnewLM_300017500.1:CDS:1;Parent=LTnewLM_300017500.1 ### LTnewLM_30 . polypeptide 396432 396983 . + . ID=LTnewLM_300017500.1:pep;Derives_from=LTnewLM_300017500.1;orthologous_to=LmjF.30.1140_mRNA;ortholog_cluster=OG0004166;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 398252 400945 1 + . ID=LTnewLM_300017600 LTnewLM_30 AUGUSTUS mRNA 398252 400945 1 + . ID=LTnewLM_300017600.1;Parent=LTnewLM_300017600 LTnewLM_30 AUGUSTUS CDS 398252 400945 1 + 0 ID=LTnewLM_300017600.1:CDS:1;Parent=LTnewLM_300017600.1 ### LTnewLM_30 . polypeptide 398252 400945 . + . ID=LTnewLM_300017600.1:pep;Derives_from=LTnewLM_300017600.1;orthologous_to=LmjF.30.1150_mRNA;ortholog_cluster=OG0004167;product=term%3DMA3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02847 LTnewLM_30 Pfam protein_match 400163 400330 . + . Parent=LTnewLM_300017600.1:pep;Name=PF02847;signature_desc=MA3 domain ### LTnewLM_30 Liftoff gene 401491 407280 . + . ID=LTnewLM_300017700;coverage=0.996;sequence_ID=0.924;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.1160_0 LTnewLM_30 Liftoff mRNA 401491 407280 . + . ID=LTnewLM_300017700.1;Parent=LTnewLM_300017700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 401491 407280 . + 0 ID=LTnewLM_300017700.1:CDS:1;Parent=LTnewLM_300017700.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 401491 407280 . + . ID=LTnewLM_300017700.1:pep;Derives_from=LTnewLM_300017700.1;orthologous_to=LmjF.30.1160_mRNA;ortholog_cluster=OG0004168;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 408599 410647 1 + . ID=LTnewLM_300017800 LTnewLM_30 AUGUSTUS mRNA 408599 410647 1 + . ID=LTnewLM_300017800.1;Parent=LTnewLM_300017800 LTnewLM_30 AUGUSTUS CDS 408599 410647 1 + 0 ID=LTnewLM_300017800.1:CDS:1;Parent=LTnewLM_300017800.1 ### LTnewLM_30 . polypeptide 408599 410647 . + . ID=LTnewLM_300017800.1:pep;Derives_from=LTnewLM_300017800.1;orthologous_to=LmjF.30.1170_mRNA;ortholog_cluster=OG0004169;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 409934 410314 . + . Parent=LTnewLM_300017800.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_30 AUGUSTUS gene 412959 413459 1 + . ID=LTnewLM_300017900 LTnewLM_30 AUGUSTUS mRNA 412959 413459 1 + . ID=LTnewLM_300017900.1;Parent=LTnewLM_300017900 LTnewLM_30 AUGUSTUS CDS 412959 413459 1 + 0 ID=LTnewLM_300017900.1:CDS:1;Parent=LTnewLM_300017900.1 ### LTnewLM_30 . polypeptide 412959 413459 . + . ID=LTnewLM_300017900.1:pep;Derives_from=LTnewLM_300017900.1;orthologous_to=LmjF.30.1180_mRNA;ortholog_cluster=OG0004170;product=term%3DTransmembrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14995 LTnewLM_30 Pfam protein_match 413049 413414 . + . Parent=LTnewLM_300017900.1:pep;Name=PF14995;signature_desc=Transmembrane protein ### LTnewLM_30 . pseudogene 414380 416266 . + . ID=LTnewLM_300018000:pseudogene;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.1190_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 414380 416266 . + . ID=LTnewLM_300018000.1;Parent=LTnewLM_300018000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 414380 416266 . + . ID=LTnewLM_300018000.1:pseudogenic_exon:1;Parent=LTnewLM_300018000.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 414380 416266 . + . ID=LTnewLM_300018000.1:pep;Derives_from=LTnewLM_300018000.1;orthologous_to=LmjF.30.1190_mRNA;ortholog_cluster=OG0007589;product=term%3DCupin-like domain/JmjC domain%2C hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13621|Pfam:PF02373 LTnewLM_30 Pfam protein_match 415352 416080 . + . Parent=LTnewLM_300018000.1:pep;Name=PF13621;signature_desc=Cupin-like domain LTnewLM_30 Pfam protein_match 415997 416092 . + . Parent=LTnewLM_300018000.1:pep;Name=PF02373;signature_desc=JmjC domain%2C hydroxylase ### LTnewLM_30 AUGUSTUS gene 418408 421428 1 + . ID=LTnewLM_300018100 LTnewLM_30 AUGUSTUS mRNA 418408 421428 1 + . ID=LTnewLM_300018100.1;Parent=LTnewLM_300018100 LTnewLM_30 AUGUSTUS CDS 418408 421428 1 + 0 ID=LTnewLM_300018100.1:CDS:1;Parent=LTnewLM_300018100.1 ### LTnewLM_30 . polypeptide 418408 421428 . + . ID=LTnewLM_300018100.1:pep;Derives_from=LTnewLM_300018100.1;orthologous_to=LmjF.30.1200_mRNA;ortholog_cluster=OG0004171;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_30 Pfam protein_match 419884 421419 . + . Parent=LTnewLM_300018100.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_30 AUGUSTUS gene 423075 423335 1 + . ID=LTnewLM_300018200 LTnewLM_30 AUGUSTUS mRNA 423075 423335 1 + . ID=LTnewLM_300018200.1;Parent=LTnewLM_300018200 LTnewLM_30 AUGUSTUS CDS 423075 423335 1 + 0 ID=LTnewLM_300018200.1:CDS:1;Parent=LTnewLM_300018200.1 ### LTnewLM_30 . polypeptide 423075 423335 . + . ID=LTnewLM_300018200.1:pep;Derives_from=LTnewLM_300018200.1;orthologous_to=LmjF.30.1205_mRNA;ortholog_cluster=OG0004172;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_30 Pfam protein_match 423126 423317 . + . Parent=LTnewLM_300018200.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_30 AUGUSTUS gene 424275 427067 1 + . ID=LTnewLM_300018300 LTnewLM_30 AUGUSTUS mRNA 424275 427067 1 + . ID=LTnewLM_300018300.1;Parent=LTnewLM_300018300 LTnewLM_30 AUGUSTUS CDS 424275 427067 1 + 0 ID=LTnewLM_300018300.1:CDS:1;Parent=LTnewLM_300018300.1 ### LTnewLM_30 . polypeptide 424275 427067 . + . ID=LTnewLM_300018300.1:pep;Derives_from=LTnewLM_300018300.1;orthologous_to=LmjF.30.1220_mRNA;ortholog_cluster=OG0004173;product=term%3DAAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13521 LTnewLM_30 Pfam protein_match 425190 425726 . + . Parent=LTnewLM_300018300.1:pep;Name=PF13521;signature_desc=AAA domain ### LTnewLM_30 AUGUSTUS gene 429168 431339 1 + . ID=LTnewLM_300018400 LTnewLM_30 AUGUSTUS mRNA 429168 431339 1 + . ID=LTnewLM_300018400.1;Parent=LTnewLM_300018400 LTnewLM_30 AUGUSTUS CDS 429168 431339 1 + 0 ID=LTnewLM_300018400.1:CDS:1;Parent=LTnewLM_300018400.1 ### LTnewLM_30 . polypeptide 429168 431339 . + . ID=LTnewLM_300018400.1:pep;Derives_from=LTnewLM_300018400.1;orthologous_to=LmjF.30.1230_mRNA;ortholog_cluster=OG0004174;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920 LTnewLM_30 Pfam protein_match 429267 429401 . + . Parent=LTnewLM_300018400.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_30 AUGUSTUS gene 433073 434314 1 + . ID=LTnewLM_300018500 LTnewLM_30 AUGUSTUS mRNA 433073 434314 1 + . ID=LTnewLM_300018500.1;Parent=LTnewLM_300018500 LTnewLM_30 AUGUSTUS CDS 433073 434314 1 + 0 ID=LTnewLM_300018500.1:CDS:1;Parent=LTnewLM_300018500.1 ### LTnewLM_30 . polypeptide 433073 434314 . + . ID=LTnewLM_300018500.1:pep;Derives_from=LTnewLM_300018500.1;orthologous_to=LmjF.30.1240_mRNA;ortholog_cluster=OG0004175;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 435969 436877 1 + . ID=LTnewLM_300018600 LTnewLM_30 AUGUSTUS mRNA 435969 436877 1 + . ID=LTnewLM_300018600.1;Parent=LTnewLM_300018600 LTnewLM_30 AUGUSTUS CDS 435969 436877 1 + 0 ID=LTnewLM_300018600.1:CDS:1;Parent=LTnewLM_300018600.1 ### LTnewLM_30 . polypeptide 435969 436877 . + . ID=LTnewLM_300018600.1:pep;Derives_from=LTnewLM_300018600.1;orthologous_to=LmjF.30.1250_mRNA;ortholog_cluster=OG0004176;product=term%3DPhosphomethylpyrimidine kinase/pfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08543|Pfam:PF00294 LTnewLM_30 Pfam protein_match 436215 436769 . + . Parent=LTnewLM_300018600.1:pep;Name=PF08543;signature_desc=Phosphomethylpyrimidine kinase LTnewLM_30 Pfam protein_match 436257 436526 . + . Parent=LTnewLM_300018600.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_30 AUGUSTUS gene 437791 438846 1 + . ID=LTnewLM_300018700 LTnewLM_30 AUGUSTUS mRNA 437791 438846 1 + . ID=LTnewLM_300018700.1;Parent=LTnewLM_300018700 LTnewLM_30 AUGUSTUS CDS 437791 438846 1 + 0 ID=LTnewLM_300018700.1:CDS:1;Parent=LTnewLM_300018700.1 ### LTnewLM_30 . polypeptide 437791 438846 . + . ID=LTnewLM_300018700.1:pep;Derives_from=LTnewLM_300018700.1;orthologous_to=LmjF.30.1255_mRNA;ortholog_cluster=OG0004177;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 440194 446166 1 + . ID=LTnewLM_300018800 LTnewLM_30 AUGUSTUS mRNA 440194 446166 1 + . ID=LTnewLM_300018800.1;Parent=LTnewLM_300018800 LTnewLM_30 AUGUSTUS CDS 440194 446166 1 + 0 ID=LTnewLM_300018800.1:CDS:1;Parent=LTnewLM_300018800.1 ### LTnewLM_30 . polypeptide 440194 446166 . + . ID=LTnewLM_300018800.1:pep;Derives_from=LTnewLM_300018800.1;orthologous_to=LmjF.30.1260_mRNA;ortholog_cluster=OG0004178;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 447290 449404 1 + . ID=LTnewLM_300018900 LTnewLM_30 AUGUSTUS mRNA 447290 449404 1 + . ID=LTnewLM_300018900.1;Parent=LTnewLM_300018900 LTnewLM_30 AUGUSTUS CDS 447290 449404 1 + 0 ID=LTnewLM_300018900.1:CDS:1;Parent=LTnewLM_300018900.1 ### LTnewLM_30 . polypeptide 447290 449404 . + . ID=LTnewLM_300018900.1:pep;Derives_from=LTnewLM_300018900.1;orthologous_to=LmjF.30.1270_mRNA;ortholog_cluster=OG0004179;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 450356 454696 1 + . ID=LTnewLM_300019000 LTnewLM_30 AUGUSTUS mRNA 450356 454696 1 + . ID=LTnewLM_300019000.1;Parent=LTnewLM_300019000 LTnewLM_30 AUGUSTUS CDS 450356 454696 1 + 0 ID=LTnewLM_300019000.1:CDS:1;Parent=LTnewLM_300019000.1 ### LTnewLM_30 . polypeptide 450356 454696 . + . ID=LTnewLM_300019000.1:pep;Derives_from=LTnewLM_300019000.1;orthologous_to=LmjF.30.1280_mRNA;ortholog_cluster=OG0004180;product=term%3DRegion in Clathrin and VPS%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00637;Ontology_term=GO:0006886,GO:0016192 LTnewLM_30 Pfam protein_match 453254 453628 . + . Parent=LTnewLM_300019000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 ### LTnewLM_30 AUGUSTUS gene 455360 456226 1 + . ID=LTnewLM_300019100 LTnewLM_30 AUGUSTUS mRNA 455360 456226 1 + . ID=LTnewLM_300019100.1;Parent=LTnewLM_300019100 LTnewLM_30 AUGUSTUS CDS 455360 456226 1 + 0 ID=LTnewLM_300019100.1:CDS:1;Parent=LTnewLM_300019100.1 ### LTnewLM_30 . polypeptide 455360 456226 . + . ID=LTnewLM_300019100.1:pep;Derives_from=LTnewLM_300019100.1;orthologous_to=LmjF.30.1290_mRNA;ortholog_cluster=OG0004181;product=term%3DBrix domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04427 LTnewLM_30 Pfam protein_match 455627 456130 . + . Parent=LTnewLM_300019100.1:pep;Name=PF04427;signature_desc=Brix domain ### LTnewLM_30 . pseudogene 457815 462253 . + . ID=LTnewLM_300019200:pseudogene;coverage=0.995;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.1300_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 457815 462253 . + . ID=LTnewLM_300019200.1;Parent=LTnewLM_300019200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 457815 462253 . + . ID=LTnewLM_300019200.1:pseudogenic_exon:1;Parent=LTnewLM_300019200.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 457815 462253 . + . ID=LTnewLM_300019200.1:pep;Derives_from=LTnewLM_300019200.1;product=term%3Dhypothetical protein ### LTnewLM_30 Liftoff gene 463593 469400 . + . ID=LTnewLM_300019300;coverage=0.997;sequence_ID=0.929;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.1310_0 LTnewLM_30 Liftoff mRNA 463593 469400 . + . ID=LTnewLM_300019300.1;Parent=LTnewLM_300019300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 463593 469400 . + 0 ID=LTnewLM_300019300.1:CDS:1;Parent=LTnewLM_300019300.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 463593 469400 . + . ID=LTnewLM_300019300.1:pep;Derives_from=LTnewLM_300019300.1;orthologous_to=LmjF.30.1310_mRNA;ortholog_cluster=OG0004182;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 470338 471939 2 + . ID=LTnewLM_300019400 LTnewLM_30 AUGUSTUS mRNA 470338 471939 1 + . ID=LTnewLM_300019400.1;Parent=LTnewLM_300019400 LTnewLM_30 AUGUSTUS CDS 470338 471939 1 + 0 ID=LTnewLM_300019400.1:CDS:1;Parent=LTnewLM_300019400.1 LTnewLM_30 AUGUSTUS mRNA 470614 471939 1 + . ID=LTnewLM_300019400.2;Parent=LTnewLM_300019400 LTnewLM_30 AUGUSTUS CDS 470614 471939 1 + 0 ID=LTnewLM_300019400.2:CDS:1;Parent=LTnewLM_300019400.2 ### LTnewLM_30 . polypeptide 470338 471939 . + . ID=LTnewLM_300019400.1:pep;Derives_from=LTnewLM_300019400.1;orthologous_to=LTnewLM_300019400.2,LmjF.30.1330_mRNA;ortholog_cluster=OG0000431;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_30 Pfam protein_match 470434 470832 . + . Parent=LTnewLM_300019400.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_30 Pfam protein_match 471289 471684 . + . Parent=LTnewLM_300019400.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_30 . polypeptide 470614 471939 . + . ID=LTnewLM_300019400.2:pep;Derives_from=LTnewLM_300019400.2;orthologous_to=LTnewLM_300019400.1,LmjF.30.1330_mRNA;ortholog_cluster=OG0000431;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_30 Pfam protein_match 471289 471684 . + . Parent=LTnewLM_300019400.2:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_30 AUGUSTUS gene 472707 473663 1 + . ID=LTnewLM_300019500 LTnewLM_30 AUGUSTUS mRNA 472707 473663 1 + . ID=LTnewLM_300019500.1;Parent=LTnewLM_300019500 LTnewLM_30 AUGUSTUS CDS 472707 473663 1 + 0 ID=LTnewLM_300019500.1:CDS:1;Parent=LTnewLM_300019500.1 ### LTnewLM_30 . polypeptide 472707 473663 . + . ID=LTnewLM_300019500.1:pep;Derives_from=LTnewLM_300019500.1;orthologous_to=LmjF.30.1340_mRNA;ortholog_cluster=OG0004183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 474287 476434 1 + . ID=LTnewLM_300019600 LTnewLM_30 AUGUSTUS mRNA 474287 476434 1 + . ID=LTnewLM_300019600.1;Parent=LTnewLM_300019600 LTnewLM_30 AUGUSTUS CDS 474287 476434 1 + 0 ID=LTnewLM_300019600.1:CDS:1;Parent=LTnewLM_300019600.1 ### LTnewLM_30 . polypeptide 474287 476434 . + . ID=LTnewLM_300019600.1:pep;Derives_from=LTnewLM_300019600.1;orthologous_to=LmjF.30.1350_mRNA;ortholog_cluster=OG0004184;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_30 Pfam protein_match 475628 476269 . + . Parent=LTnewLM_300019600.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_30 AUGUSTUS gene 477249 478838 2 + . ID=LTnewLM_300019700 LTnewLM_30 AUGUSTUS mRNA 477249 478838 1 + . ID=LTnewLM_300019700.1;Parent=LTnewLM_300019700 LTnewLM_30 AUGUSTUS CDS 477249 478838 1 + 0 ID=LTnewLM_300019700.1:CDS:1;Parent=LTnewLM_300019700.1 LTnewLM_30 AUGUSTUS mRNA 477378 478838 1 + . ID=LTnewLM_300019700.2;Parent=LTnewLM_300019700 LTnewLM_30 AUGUSTUS CDS 477378 478838 1 + 0 ID=LTnewLM_300019700.2:CDS:1;Parent=LTnewLM_300019700.2 ### LTnewLM_30 . polypeptide 477249 478838 . + . ID=LTnewLM_300019700.1:pep;Derives_from=LTnewLM_300019700.1;orthologous_to=LTnewLM_300019700.2,LmjF.30.1360_mRNA;ortholog_cluster=OG0000432;product=term%3DRio2%2C N-terminal/RIO1 family/ABC1 atypical kinase-like domain/Phosphotransferase enzyme family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09202|Pfam:PF01163|Pfam:PF03109|Pfam:PF01636;Ontology_term=GO:0003824,GO:0004674,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 477402 477644 . + . Parent=LTnewLM_300019700.1:pep;Name=PF09202;signature_desc=Rio2%2C N-terminal;Ontology_term=GO:0004674,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 477708 478214 . + . Parent=LTnewLM_300019700.1:pep;Name=PF01163;signature_desc=RIO1 family;Ontology_term=GO:0003824,GO:0005524 LTnewLM_30 Pfam protein_match 477894 478154 . + . Parent=LTnewLM_300019700.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain LTnewLM_30 Pfam protein_match 477996 478130 . + . Parent=LTnewLM_300019700.1:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family ### LTnewLM_30 . polypeptide 477378 478838 . + . ID=LTnewLM_300019700.2:pep;Derives_from=LTnewLM_300019700.2;orthologous_to=LTnewLM_300019700.1,LmjF.30.1360_mRNA;ortholog_cluster=OG0000432;product=term%3DRio2%2C N-terminal/RIO1 family/ABC1 atypical kinase-like domain/Phosphotransferase enzyme family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09202|Pfam:PF01163|Pfam:PF03109|Pfam:PF01636;Ontology_term=GO:0003824,GO:0004674,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 477402 477644 . + . Parent=LTnewLM_300019700.2:pep;Name=PF09202;signature_desc=Rio2%2C N-terminal;Ontology_term=GO:0004674,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 477708 478214 . + . Parent=LTnewLM_300019700.2:pep;Name=PF01163;signature_desc=RIO1 family;Ontology_term=GO:0003824,GO:0005524 LTnewLM_30 Pfam protein_match 477894 478154 . + . Parent=LTnewLM_300019700.2:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain LTnewLM_30 Pfam protein_match 477996 478130 . + . Parent=LTnewLM_300019700.2:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family ### LTnewLM_30 AUGUSTUS gene 481047 484226 1 + . ID=LTnewLM_300019800 LTnewLM_30 AUGUSTUS mRNA 481047 484226 1 + . ID=LTnewLM_300019800.1;Parent=LTnewLM_300019800 LTnewLM_30 AUGUSTUS CDS 481047 484226 1 + 0 ID=LTnewLM_300019800.1:CDS:1;Parent=LTnewLM_300019800.1 ### LTnewLM_30 . polypeptide 481047 484226 . + . ID=LTnewLM_300019800.1:pep;Derives_from=LTnewLM_300019800.1;orthologous_to=LmjF.30.1370_mRNA;ortholog_cluster=OG0004185;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_30 Pfam protein_match 483897 484181 . + . Parent=LTnewLM_300019800.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_30 AUGUSTUS gene 488574 489899 1 + . ID=LTnewLM_300019900 LTnewLM_30 AUGUSTUS mRNA 488574 489899 1 + . ID=LTnewLM_300019900.1;Parent=LTnewLM_300019900 LTnewLM_30 AUGUSTUS CDS 488574 489899 1 + 0 ID=LTnewLM_300019900.1:CDS:1;Parent=LTnewLM_300019900.1 ### LTnewLM_30 . polypeptide 488574 489899 . + . ID=LTnewLM_300019900.1:pep;Derives_from=LTnewLM_300019900.1;orthologous_to=LmjF.30.1380_mRNA;ortholog_cluster=OG0004186;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_30 Pfam protein_match 488934 489875 . + . Parent=LTnewLM_300019900.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_30 Pfam protein_match 489276 489569 . + . Parent=LTnewLM_300019900.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_30 AUGUSTUS gene 492764 493261 1 + . ID=LTnewLM_300020000 LTnewLM_30 AUGUSTUS mRNA 492764 493261 1 + . ID=LTnewLM_300020000.1;Parent=LTnewLM_300020000 LTnewLM_30 AUGUSTUS CDS 492764 493261 1 + 0 ID=LTnewLM_300020000.1:CDS:1;Parent=LTnewLM_300020000.1 ### LTnewLM_30 . polypeptide 492764 493261 . + . ID=LTnewLM_300020000.1:pep;Derives_from=LTnewLM_300020000.1;orthologous_to=LmjF.30.1390_mRNA;ortholog_cluster=OG0004187;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_30 Pfam protein_match 492878 493171 . + . Parent=LTnewLM_300020000.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_30 AUGUSTUS gene 495168 496829 1 + . ID=LTnewLM_300020100 LTnewLM_30 AUGUSTUS mRNA 495168 496829 1 + . ID=LTnewLM_300020100.1;Parent=LTnewLM_300020100 LTnewLM_30 AUGUSTUS CDS 495168 496829 1 + 0 ID=LTnewLM_300020100.1:CDS:1;Parent=LTnewLM_300020100.1 ### LTnewLM_30 . polypeptide 495168 496829 . + . ID=LTnewLM_300020100.1:pep;Derives_from=LTnewLM_300020100.1;orthologous_to=LmjF.30.1400_mRNA;ortholog_cluster=OG0004188;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 495921 496019 . + . Parent=LTnewLM_300020100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 496059 496157 . + . Parent=LTnewLM_300020100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 496185 496289 . + . Parent=LTnewLM_300020100.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 499553 500080 1 + . ID=LTnewLM_300020200 LTnewLM_30 AUGUSTUS mRNA 499553 500080 1 + . ID=LTnewLM_300020200.1;Parent=LTnewLM_300020200 LTnewLM_30 AUGUSTUS CDS 499553 500080 1 + 0 ID=LTnewLM_300020200.1:CDS:1;Parent=LTnewLM_300020200.1 ### LTnewLM_30 . polypeptide 499553 500080 . + . ID=LTnewLM_300020200.1:pep;Derives_from=LTnewLM_300020200.1;orthologous_to=LTnewLM_300020500.1,LTnewLM_300020800.1,LTnewLM_300021100.1,LmjF.30.1410_mRNA;ortholog_cluster=OG0000093;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_30 Pfam protein_match 499694 499990 . + . Parent=LTnewLM_300020200.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_30 AUGUSTUS gene 502307 502528 1 + . ID=LTnewLM_300020300 LTnewLM_30 AUGUSTUS mRNA 502307 502528 1 + . ID=LTnewLM_300020300.1;Parent=LTnewLM_300020300 LTnewLM_30 AUGUSTUS CDS 502307 502528 1 + 0 ID=LTnewLM_300020300.1:CDS:1;Parent=LTnewLM_300020300.1 ### LTnewLM_30 . polypeptide 502307 502528 . + . ID=LTnewLM_300020300.1:pep;Derives_from=LTnewLM_300020300.1;orthologous_to=LTnewLM_190019300.1,LTnewLM_300020600.1,LTnewLM_300020900.1,LTnewLM_300021200.1;ortholog_cluster=OG0000084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 503757 504152 0.56 + . ID=LTnewLM_300020400 LTnewLM_30 AUGUSTUS mRNA 503757 504152 0.56 + . ID=LTnewLM_300020400.1;Parent=LTnewLM_300020400 LTnewLM_30 AUGUSTUS CDS 503757 504152 0.56 + 0 ID=LTnewLM_300020400.1:CDS:1;Parent=LTnewLM_300020400.1 ### LTnewLM_30 . polypeptide 503757 504152 . + . ID=LTnewLM_300020400.1:pep;Derives_from=LTnewLM_300020400.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 505716 506243 1 + . ID=LTnewLM_300020500 LTnewLM_30 AUGUSTUS mRNA 505716 506243 1 + . ID=LTnewLM_300020500.1;Parent=LTnewLM_300020500 LTnewLM_30 AUGUSTUS CDS 505716 506243 1 + 0 ID=LTnewLM_300020500.1:CDS:1;Parent=LTnewLM_300020500.1 ### LTnewLM_30 . polypeptide 505716 506243 . + . ID=LTnewLM_300020500.1:pep;Derives_from=LTnewLM_300020500.1;orthologous_to=LTnewLM_300020200.1,LTnewLM_300020800.1,LTnewLM_300021100.1,LmjF.30.1410_mRNA;ortholog_cluster=OG0000093;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_30 Pfam protein_match 505857 506153 . + . Parent=LTnewLM_300020500.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_30 AUGUSTUS gene 508471 508692 1 + . ID=LTnewLM_300020600 LTnewLM_30 AUGUSTUS mRNA 508471 508692 1 + . ID=LTnewLM_300020600.1;Parent=LTnewLM_300020600 LTnewLM_30 AUGUSTUS CDS 508471 508692 1 + 0 ID=LTnewLM_300020600.1:CDS:1;Parent=LTnewLM_300020600.1 ### LTnewLM_30 . polypeptide 508471 508692 . + . ID=LTnewLM_300020600.1:pep;Derives_from=LTnewLM_300020600.1;orthologous_to=LTnewLM_190019300.1,LTnewLM_300020300.1,LTnewLM_300020900.1,LTnewLM_300021200.1;ortholog_cluster=OG0000084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 509920 510315 0.6 + . ID=LTnewLM_300020700 LTnewLM_30 AUGUSTUS mRNA 509920 510315 0.6 + . ID=LTnewLM_300020700.1;Parent=LTnewLM_300020700 LTnewLM_30 AUGUSTUS CDS 509920 510315 0.6 + 0 ID=LTnewLM_300020700.1:CDS:1;Parent=LTnewLM_300020700.1 ### LTnewLM_30 . polypeptide 509920 510315 . + . ID=LTnewLM_300020700.1:pep;Derives_from=LTnewLM_300020700.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 511877 512404 1 + . ID=LTnewLM_300020800 LTnewLM_30 AUGUSTUS mRNA 511877 512404 1 + . ID=LTnewLM_300020800.1;Parent=LTnewLM_300020800 LTnewLM_30 AUGUSTUS CDS 511877 512404 1 + 0 ID=LTnewLM_300020800.1:CDS:1;Parent=LTnewLM_300020800.1 ### LTnewLM_30 . polypeptide 511877 512404 . + . ID=LTnewLM_300020800.1:pep;Derives_from=LTnewLM_300020800.1;orthologous_to=LTnewLM_300020200.1,LTnewLM_300020500.1,LTnewLM_300021100.1,LmjF.30.1410_mRNA;ortholog_cluster=OG0000093;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_30 Pfam protein_match 512018 512314 . + . Parent=LTnewLM_300020800.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_30 AUGUSTUS gene 514633 514854 1 + . ID=LTnewLM_300020900 LTnewLM_30 AUGUSTUS mRNA 514633 514854 1 + . ID=LTnewLM_300020900.1;Parent=LTnewLM_300020900 LTnewLM_30 AUGUSTUS CDS 514633 514854 1 + 0 ID=LTnewLM_300020900.1:CDS:1;Parent=LTnewLM_300020900.1 ### LTnewLM_30 . polypeptide 514633 514854 . + . ID=LTnewLM_300020900.1:pep;Derives_from=LTnewLM_300020900.1;orthologous_to=LTnewLM_190019300.1,LTnewLM_300020300.1,LTnewLM_300020600.1,LTnewLM_300021200.1;ortholog_cluster=OG0000084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 515362 516630 1 + . ID=LTnewLM_300021000 LTnewLM_30 AUGUSTUS mRNA 515362 516630 1 + . ID=LTnewLM_300021000.1;Parent=LTnewLM_300021000 LTnewLM_30 AUGUSTUS CDS 515362 516630 1 + 0 ID=LTnewLM_300021000.1:CDS:1;Parent=LTnewLM_300021000.1 ### LTnewLM_30 . polypeptide 515362 516630 . + . ID=LTnewLM_300021000.1:pep;Derives_from=LTnewLM_300021000.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 518037 518564 1 + . ID=LTnewLM_300021100 LTnewLM_30 AUGUSTUS mRNA 518037 518564 1 + . ID=LTnewLM_300021100.1;Parent=LTnewLM_300021100 LTnewLM_30 AUGUSTUS CDS 518037 518564 1 + 0 ID=LTnewLM_300021100.1:CDS:1;Parent=LTnewLM_300021100.1 ### LTnewLM_30 . polypeptide 518037 518564 . + . ID=LTnewLM_300021100.1:pep;Derives_from=LTnewLM_300021100.1;orthologous_to=LTnewLM_300020200.1,LTnewLM_300020500.1,LTnewLM_300020800.1,LmjF.30.1410_mRNA;ortholog_cluster=OG0000093;product=term%3DPLAC8 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04749 LTnewLM_30 Pfam protein_match 518178 518474 . + . Parent=LTnewLM_300021100.1:pep;Name=PF04749;signature_desc=PLAC8 family ### LTnewLM_30 AUGUSTUS gene 520771 520992 1 + . ID=LTnewLM_300021200 LTnewLM_30 AUGUSTUS mRNA 520771 520992 1 + . ID=LTnewLM_300021200.1;Parent=LTnewLM_300021200 LTnewLM_30 AUGUSTUS CDS 520771 520992 1 + 0 ID=LTnewLM_300021200.1:CDS:1;Parent=LTnewLM_300021200.1 ### LTnewLM_30 . polypeptide 520771 520992 . + . ID=LTnewLM_300021200.1:pep;Derives_from=LTnewLM_300021200.1;orthologous_to=LTnewLM_190019300.1,LTnewLM_300020300.1,LTnewLM_300020600.1,LTnewLM_300020900.1;ortholog_cluster=OG0000084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 527724 532127 . + . ID=LTnewLM_300021300;coverage=0.996;sequence_ID=0.906;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.1440_0 LTnewLM_30 Liftoff mRNA 527724 532127 . + . ID=LTnewLM_300021300.1;Parent=LTnewLM_300021300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 527724 532127 . + 0 ID=LTnewLM_300021300.1:CDS:1;Parent=LTnewLM_300021300.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 527724 532127 . + . ID=LTnewLM_300021300.1:pep;Derives_from=LTnewLM_300021300.1;orthologous_to=LmjF.30.1440_mRNA;ortholog_cluster=OG0004189;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 535321 538956 1 + . ID=LTnewLM_300021400 LTnewLM_30 AUGUSTUS mRNA 535321 538956 1 + . ID=LTnewLM_300021400.1;Parent=LTnewLM_300021400 LTnewLM_30 AUGUSTUS CDS 535321 538956 1 + 0 ID=LTnewLM_300021400.1:CDS:1;Parent=LTnewLM_300021400.1 ### LTnewLM_30 . polypeptide 535321 538956 . + . ID=LTnewLM_300021400.1:pep;Derives_from=LTnewLM_300021400.1;orthologous_to=LmjF.30.1450_mRNA;ortholog_cluster=OG0004190;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_30 Pfam protein_match 535342 535785 . + . Parent=LTnewLM_300021400.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_30 Pfam protein_match 535414 536379 . + . Parent=LTnewLM_300021400.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_30 AUGUSTUS gene 542882 543832 1 + . ID=LTnewLM_300021500 LTnewLM_30 AUGUSTUS mRNA 542882 543832 1 + . ID=LTnewLM_300021500.1;Parent=LTnewLM_300021500 LTnewLM_30 AUGUSTUS CDS 542882 543832 1 + 0 ID=LTnewLM_300021500.1:CDS:1;Parent=LTnewLM_300021500.1 ### LTnewLM_30 . polypeptide 542882 543832 . + . ID=LTnewLM_300021500.1:pep;Derives_from=LTnewLM_300021500.1;orthologous_to=LmjF.30.1500_mRNA,LmjF.30.1510_mRNA;ortholog_cluster=OG0000433;product=term%3DS1/P1 Nuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02265;Ontology_term=GO:0004519,GO:0006308,GO:0003676 LTnewLM_30 Pfam protein_match 542972 543760 . + . Parent=LTnewLM_300021500.1:pep;Name=PF02265;signature_desc=S1/P1 Nuclease;Ontology_term=GO:0003676,GO:0004519,GO:0006308 ### LTnewLM_30 AUGUSTUS gene 545660 547093 1 + . ID=LTnewLM_300021600 LTnewLM_30 AUGUSTUS mRNA 545660 547093 1 + . ID=LTnewLM_300021600.1;Parent=LTnewLM_300021600 LTnewLM_30 AUGUSTUS CDS 545660 547093 1 + 0 ID=LTnewLM_300021600.1:CDS:1;Parent=LTnewLM_300021600.1 ### LTnewLM_30 . polypeptide 545660 547093 . + . ID=LTnewLM_300021600.1:pep;Derives_from=LTnewLM_300021600.1;orthologous_to=LmjF.30.1520_mRNA;ortholog_cluster=OG0004191;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_30 Pfam protein_match 545732 546751 . + . Parent=LTnewLM_300021600.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_30 AUGUSTUS gene 547914 551087 1 + . ID=LTnewLM_300021700 LTnewLM_30 AUGUSTUS mRNA 547914 551087 1 + . ID=LTnewLM_300021700.1;Parent=LTnewLM_300021700 LTnewLM_30 AUGUSTUS CDS 547914 551087 1 + 0 ID=LTnewLM_300021700.1:CDS:1;Parent=LTnewLM_300021700.1 ### LTnewLM_30 . polypeptide 547914 551087 . + . ID=LTnewLM_300021700.1:pep;Derives_from=LTnewLM_300021700.1;orthologous_to=LmjF.30.1530_mRNA;ortholog_cluster=OG0004192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 552461 553432 1 + . ID=LTnewLM_300021800 LTnewLM_30 AUGUSTUS mRNA 552461 553432 1 + . ID=LTnewLM_300021800.1;Parent=LTnewLM_300021800 LTnewLM_30 AUGUSTUS CDS 552461 553432 1 + 0 ID=LTnewLM_300021800.1:CDS:1;Parent=LTnewLM_300021800.1 ### LTnewLM_30 . polypeptide 552461 553432 . + . ID=LTnewLM_300021800.1:pep;Derives_from=LTnewLM_300021800.1;orthologous_to=LmjF.30.1540_mRNA;ortholog_cluster=OG0004193;product=term%3DFlavoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02441;Ontology_term=GO:0003824 LTnewLM_30 Pfam protein_match 552521 552973 . + . Parent=LTnewLM_300021800.1:pep;Name=PF02441;signature_desc=Flavoprotein;Ontology_term=GO:0003824 ### LTnewLM_30 AUGUSTUS gene 555168 555407 1 + . ID=LTnewLM_300021900 LTnewLM_30 AUGUSTUS mRNA 555168 555407 1 + . ID=LTnewLM_300021900.1;Parent=LTnewLM_300021900 LTnewLM_30 AUGUSTUS CDS 555168 555407 1 + 0 ID=LTnewLM_300021900.1:CDS:1;Parent=LTnewLM_300021900.1 ### LTnewLM_30 . polypeptide 555168 555407 . + . ID=LTnewLM_300021900.1:pep;Derives_from=LTnewLM_300021900.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 556699 558198 1 + . ID=LTnewLM_300022000 LTnewLM_30 AUGUSTUS mRNA 556699 558198 1 + . ID=LTnewLM_300022000.1;Parent=LTnewLM_300022000 LTnewLM_30 AUGUSTUS CDS 556699 558198 1 + 0 ID=LTnewLM_300022000.1:CDS:1;Parent=LTnewLM_300022000.1 ### LTnewLM_30 . polypeptide 556699 558198 . + . ID=LTnewLM_300022000.1:pep;Derives_from=LTnewLM_300022000.1;orthologous_to=LmjF.30.1550_mRNA;ortholog_cluster=OG0004194;product=term%3DtRNA pseudouridine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01416;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_30 Pfam protein_match 557290 557610 . + . Parent=LTnewLM_300022000.1:pep;Name=PF01416;signature_desc=tRNA pseudouridine synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_30 AUGUSTUS gene 559405 564471 1 + . ID=LTnewLM_300022100 LTnewLM_30 AUGUSTUS mRNA 559405 564471 1 + . ID=LTnewLM_300022100.1;Parent=LTnewLM_300022100 LTnewLM_30 AUGUSTUS CDS 559405 564471 1 + 0 ID=LTnewLM_300022100.1:CDS:1;Parent=LTnewLM_300022100.1 ### LTnewLM_30 . polypeptide 559405 564471 . + . ID=LTnewLM_300022100.1:pep;Derives_from=LTnewLM_300022100.1;orthologous_to=LmjF.30.1560_mRNA;ortholog_cluster=OG0004195;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 563224 563400 . + . Parent=LTnewLM_300022100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 563230 563400 . + . Parent=LTnewLM_300022100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 564043 564297 . + . Parent=LTnewLM_300022100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 565318 566565 1 + . ID=LTnewLM_300022200 LTnewLM_30 AUGUSTUS mRNA 565318 566565 1 + . ID=LTnewLM_300022200.1;Parent=LTnewLM_300022200 LTnewLM_30 AUGUSTUS CDS 565318 566565 1 + 0 ID=LTnewLM_300022200.1:CDS:1;Parent=LTnewLM_300022200.1 ### LTnewLM_30 . polypeptide 565318 566565 . + . ID=LTnewLM_300022200.1:pep;Derives_from=LTnewLM_300022200.1;orthologous_to=LmjF.30.1570_mRNA;ortholog_cluster=OG0004196;product=term%3DPutative papain-like cysteine peptidase (DUF1796)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08795 LTnewLM_30 Pfam protein_match 565321 565962 . + . Parent=LTnewLM_300022200.1:pep;Name=PF08795;signature_desc=Putative papain-like cysteine peptidase (DUF1796) ### LTnewLM_30 AUGUSTUS gene 567506 570046 1 + . ID=LTnewLM_300022300 LTnewLM_30 AUGUSTUS mRNA 567506 570046 1 + . ID=LTnewLM_300022300.1;Parent=LTnewLM_300022300 LTnewLM_30 AUGUSTUS CDS 567506 570046 1 + 0 ID=LTnewLM_300022300.1:CDS:1;Parent=LTnewLM_300022300.1 ### LTnewLM_30 . polypeptide 567506 570046 . + . ID=LTnewLM_300022300.1:pep;Derives_from=LTnewLM_300022300.1;orthologous_to=LmjF.30.1580_mRNA;ortholog_cluster=OG0004197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 573642 574790 1 + . ID=LTnewLM_300022400 LTnewLM_30 AUGUSTUS mRNA 573642 574790 1 + . ID=LTnewLM_300022400.1;Parent=LTnewLM_300022400 LTnewLM_30 AUGUSTUS CDS 573642 574790 1 + 0 ID=LTnewLM_300022400.1:CDS:1;Parent=LTnewLM_300022400.1 ### LTnewLM_30 . polypeptide 573642 574790 . + . ID=LTnewLM_300022400.1:pep;Derives_from=LTnewLM_300022400.1;orthologous_to=LmjF.30.1590_mRNA;ortholog_cluster=OG0004198;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 575642 577240 1 + . ID=LTnewLM_300022500 LTnewLM_30 AUGUSTUS mRNA 575642 577240 1 + . ID=LTnewLM_300022500.1;Parent=LTnewLM_300022500 LTnewLM_30 AUGUSTUS CDS 575642 577240 1 + 0 ID=LTnewLM_300022500.1:CDS:1;Parent=LTnewLM_300022500.1 ### LTnewLM_30 . polypeptide 575642 577240 . + . ID=LTnewLM_300022500.1:pep;Derives_from=LTnewLM_300022500.1;orthologous_to=LmjF.30.1600_mRNA;ortholog_cluster=OG0004199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 584551 587796 1 + . ID=LTnewLM_300022600 LTnewLM_30 AUGUSTUS mRNA 584551 587796 1 + . ID=LTnewLM_300022600.1;Parent=LTnewLM_300022600 LTnewLM_30 AUGUSTUS CDS 584551 587796 1 + 0 ID=LTnewLM_300022600.1:CDS:1;Parent=LTnewLM_300022600.1 ### LTnewLM_30 . polypeptide 584551 587796 . + . ID=LTnewLM_300022600.1:pep;Derives_from=LTnewLM_300022600.1;orthologous_to=LmjF.30.1610_mRNA;ortholog_cluster=OG0004200;product=term%3DFerric reductase like transmembrane component/FAD-binding domain/Ferric reductase NAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01794|Pfam:PF08022|Pfam:PF08030;Ontology_term=GO:0055114,GO:0016491 LTnewLM_30 Pfam protein_match 585814 586197 . + . Parent=LTnewLM_300022600.1:pep;Name=PF01794;signature_desc=Ferric reductase like transmembrane component LTnewLM_30 Pfam protein_match 586306 586638 . + . Parent=LTnewLM_300022600.1:pep;Name=PF08022;signature_desc=FAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_30 Pfam protein_match 586657 586830 . + . Parent=LTnewLM_300022600.1:pep;Name=PF08030;signature_desc=Ferric reductase NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_30 Pfam protein_match 587470 587742 . + . Parent=LTnewLM_300022600.1:pep;Name=PF08030;signature_desc=Ferric reductase NAD binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 590780 592870 1 + . ID=LTnewLM_300022700 LTnewLM_30 AUGUSTUS mRNA 590780 592870 1 + . ID=LTnewLM_300022700.1;Parent=LTnewLM_300022700 LTnewLM_30 AUGUSTUS CDS 590780 592870 1 + 0 ID=LTnewLM_300022700.1:CDS:1;Parent=LTnewLM_300022700.1 ### LTnewLM_30 . polypeptide 590780 592870 . + . ID=LTnewLM_300022700.1:pep;Derives_from=LTnewLM_300022700.1;orthologous_to=LmjF.30.1620_mRNA;ortholog_cluster=OG0004201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 593968 594354 1 + . ID=LTnewLM_300022800 LTnewLM_30 AUGUSTUS mRNA 593968 594354 1 + . ID=LTnewLM_300022800.1;Parent=LTnewLM_300022800 LTnewLM_30 AUGUSTUS CDS 593968 594354 1 + 0 ID=LTnewLM_300022800.1:CDS:1;Parent=LTnewLM_300022800.1 ### LTnewLM_30 . polypeptide 593968 594354 . + . ID=LTnewLM_300022800.1:pep;Derives_from=LTnewLM_300022800.1;orthologous_to=LmjF.30.1622_mRNA,LmjF.30.1627_mRNA,LmjF.30.1632_mRNA,LmjF.30.1637_mRNA,LmjF.30.1642_mRNA,LmjF.30.1647_mRNA,LmjF.30.1655_mRNA;ortholog_cluster=OG0000030;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 596796 597248 1 + . ID=LTnewLM_300022900 LTnewLM_30 AUGUSTUS mRNA 596796 597248 1 + . ID=LTnewLM_300022900.1;Parent=LTnewLM_300022900 LTnewLM_30 AUGUSTUS CDS 596796 597248 1 + 0 ID=LTnewLM_300022900.1:CDS:1;Parent=LTnewLM_300022900.1 ### LTnewLM_30 . polypeptide 596796 597248 . + . ID=LTnewLM_300022900.1:pep;Derives_from=LTnewLM_300022900.1;orthologous_to=LmjF.30.1625_mRNA,LmjF.30.1630_mRNA,LmjF.30.1635_mRNA,LmjF.30.1640_mRNA,LmjF.30.1645_mRNA,LmjF.30.1650_mRNA,LmjF.30.1660_mRNA;ortholog_cluster=OG0000031;product=term%3DProtein of unknown function (DUF1077)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06417 LTnewLM_30 Pfam protein_match 596847 597200 . + . Parent=LTnewLM_300022900.1:pep;Name=PF06417;signature_desc=Protein of unknown function (DUF1077) ### LTnewLM_30 AUGUSTUS gene 598320 599819 1 + . ID=LTnewLM_300023000 LTnewLM_30 AUGUSTUS mRNA 598320 599819 1 + . ID=LTnewLM_300023000.1;Parent=LTnewLM_300023000 LTnewLM_30 AUGUSTUS CDS 598320 599819 1 + 0 ID=LTnewLM_300023000.1:CDS:1;Parent=LTnewLM_300023000.1 ### LTnewLM_30 . polypeptide 598320 599819 . + . ID=LTnewLM_300023000.1:pep;Derives_from=LTnewLM_300023000.1;orthologous_to=LmjF.30.1670_mRNA;ortholog_cluster=OG0004202;product=term%3DHsp33 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01430;Ontology_term=GO:0005737,GO:0006457,GO:0051082 LTnewLM_30 Pfam protein_match 599595 599735 . + . Parent=LTnewLM_300023000.1:pep;Name=PF01430;signature_desc=Hsp33 protein;Ontology_term=GO:0051082,GO:0006457,GO:0005737 ### LTnewLM_30 AUGUSTUS gene 602234 603145 1 + . ID=LTnewLM_300023100 LTnewLM_30 AUGUSTUS mRNA 602234 603145 1 + . ID=LTnewLM_300023100.1;Parent=LTnewLM_300023100 LTnewLM_30 AUGUSTUS CDS 602234 603145 1 + 0 ID=LTnewLM_300023100.1:CDS:1;Parent=LTnewLM_300023100.1 ### LTnewLM_30 . polypeptide 602234 603145 . + . ID=LTnewLM_300023100.1:pep;Derives_from=LTnewLM_300023100.1;orthologous_to=LmjF.30.1680_mRNA;ortholog_cluster=OG0004203;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_30 Pfam protein_match 602513 602926 . + . Parent=LTnewLM_300023100.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_30 . pseudogene 605008 608114 . + . ID=LTnewLM_300023200:pseudogene;coverage=0.983;sequence_ID=0.899;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.1690_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 605008 608114 . + . ID=LTnewLM_300023200.1;Parent=LTnewLM_300023200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 606884 608114 . + . ID=LTnewLM_300023200.1:pseudogenic_exon:1;Parent=LTnewLM_300023200.1;extra_copy_number=0 LTnewLM_30 . pseudogenic_transcript 607125 608114 . + . ID=LTnewLM_300023200.2;Parent=LTnewLM_300023200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 607134 608114 . + . ID=LTnewLM_300023200.2:pseudogenic_exon:1;Parent=LTnewLM_300023200.2;extra_copy_number=0 ### LTnewLM_30 . polypeptide 606884 608114 . + . ID=LTnewLM_300023200.1:pep;Derives_from=LTnewLM_300023200.1;product=term%3Dhypothetical protein ### LTnewLM_30 . polypeptide 607134 608114 . + . ID=LTnewLM_300023200.2:pep;Derives_from=LTnewLM_300023200.2;orthologous_to=LmjF.30.1690.1_mRNA,LmjF.30.1690.2_mRNA;ortholog_cluster=OG0000532;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 608930 611836 1 + . ID=LTnewLM_300023300 LTnewLM_30 AUGUSTUS mRNA 608930 611836 1 + . ID=LTnewLM_300023300.1;Parent=LTnewLM_300023300 LTnewLM_30 AUGUSTUS CDS 608930 611836 1 + 0 ID=LTnewLM_300023300.1:CDS:1;Parent=LTnewLM_300023300.1 ### LTnewLM_30 . polypeptide 608930 611836 . + . ID=LTnewLM_300023300.1:pep;Derives_from=LTnewLM_300023300.1;orthologous_to=LmjF.30.1700_mRNA;ortholog_cluster=OG0004204;product=term%3DAAA domain (Cdc48 subfamily)/AAA domain (dynein-related subfamily)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07724|Pfam:PF07728;Ontology_term=GO:0016887,GO:0005524 LTnewLM_30 Pfam protein_match 610244 610771 . + . Parent=LTnewLM_300023300.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 610250 610525 . + . Parent=LTnewLM_300023300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_30 AUGUSTUS gene 612485 613192 1 + . ID=LTnewLM_300023400 LTnewLM_30 AUGUSTUS mRNA 612485 613192 1 + . ID=LTnewLM_300023400.1;Parent=LTnewLM_300023400 LTnewLM_30 AUGUSTUS CDS 612485 613192 1 + 0 ID=LTnewLM_300023400.1:CDS:1;Parent=LTnewLM_300023400.1 ### LTnewLM_30 . polypeptide 612485 613192 . + . ID=LTnewLM_300023400.1:pep;Derives_from=LTnewLM_300023400.1;orthologous_to=LmjF.30.1710_mRNA;ortholog_cluster=OG0004205;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_30 Pfam protein_match 612518 612931 . + . Parent=LTnewLM_300023400.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_30 Pfam protein_match 612530 612892 . + . Parent=LTnewLM_300023400.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_30 Pfam protein_match 612530 613024 . + . Parent=LTnewLM_300023400.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_30 AUGUSTUS gene 614484 615434 1 + . ID=LTnewLM_300023500 LTnewLM_30 AUGUSTUS mRNA 614484 615434 1 + . ID=LTnewLM_300023500.1;Parent=LTnewLM_300023500 LTnewLM_30 AUGUSTUS CDS 614484 615434 1 + 0 ID=LTnewLM_300023500.1:CDS:1;Parent=LTnewLM_300023500.1 ### LTnewLM_30 . polypeptide 614484 615434 . + . ID=LTnewLM_300023500.1:pep;Derives_from=LTnewLM_300023500.1;orthologous_to=LmjF.30.1720_mRNA;ortholog_cluster=OG0004206;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 616012 617187 1 + . ID=LTnewLM_300023600 LTnewLM_30 AUGUSTUS mRNA 616012 617187 1 + . ID=LTnewLM_300023600.1;Parent=LTnewLM_300023600 LTnewLM_30 AUGUSTUS CDS 616012 617187 1 + 0 ID=LTnewLM_300023600.1:CDS:1;Parent=LTnewLM_300023600.1 ### LTnewLM_30 . polypeptide 616012 617187 . + . ID=LTnewLM_300023600.1:pep;Derives_from=LTnewLM_300023600.1;orthologous_to=LmjF.30.1730_mRNA;ortholog_cluster=OG0004207;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 618042 618983 1 + . ID=LTnewLM_300023700 LTnewLM_30 AUGUSTUS mRNA 618042 618983 1 + . ID=LTnewLM_300023700.1;Parent=LTnewLM_300023700 LTnewLM_30 AUGUSTUS CDS 618042 618983 1 + 0 ID=LTnewLM_300023700.1:CDS:1;Parent=LTnewLM_300023700.1 ### LTnewLM_30 . polypeptide 618042 618983 . + . ID=LTnewLM_300023700.1:pep;Derives_from=LTnewLM_300023700.1;orthologous_to=LmjF.30.1740_mRNA;ortholog_cluster=OG0004208;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 619712 620209 1 + . ID=LTnewLM_300023800 LTnewLM_30 AUGUSTUS mRNA 619712 620209 1 + . ID=LTnewLM_300023800.1;Parent=LTnewLM_300023800 LTnewLM_30 AUGUSTUS CDS 619712 620209 1 + 0 ID=LTnewLM_300023800.1:CDS:1;Parent=LTnewLM_300023800.1 ### LTnewLM_30 . polypeptide 619712 620209 . + . ID=LTnewLM_300023800.1:pep;Derives_from=LTnewLM_300023800.1;orthologous_to=LmjF.30.1750_mRNA;ortholog_cluster=OG0004209;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 620916 626804 1 + . ID=LTnewLM_300023900 LTnewLM_30 AUGUSTUS mRNA 620916 626804 1 + . ID=LTnewLM_300023900.1;Parent=LTnewLM_300023900 LTnewLM_30 AUGUSTUS CDS 620916 626804 1 + 0 ID=LTnewLM_300023900.1:CDS:1;Parent=LTnewLM_300023900.1 ### LTnewLM_30 . polypeptide 620916 626804 . + . ID=LTnewLM_300023900.1:pep;Derives_from=LTnewLM_300023900.1;orthologous_to=LmjF.30.1760_mRNA;ortholog_cluster=OG0004210;product=term%3DCLASP N terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12348 LTnewLM_30 Pfam protein_match 621984 622436 . + . Parent=LTnewLM_300023900.1:pep;Name=PF12348;signature_desc=CLASP N terminal ### LTnewLM_30 AUGUSTUS gene 631592 632965 1 + . ID=LTnewLM_300024000 LTnewLM_30 AUGUSTUS mRNA 631592 632965 1 + . ID=LTnewLM_300024000.1;Parent=LTnewLM_300024000 LTnewLM_30 AUGUSTUS CDS 631592 632965 1 + 0 ID=LTnewLM_300024000.1:CDS:1;Parent=LTnewLM_300024000.1 ### LTnewLM_30 . polypeptide 631592 632965 . + . ID=LTnewLM_300024000.1:pep;Derives_from=LTnewLM_300024000.1;orthologous_to=LmjF.30.1770_mRNA;ortholog_cluster=OG0004211;product=term%3DIntraflagellar transport complex B protein 46 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12317;Ontology_term=GO:0042073 LTnewLM_30 Pfam protein_match 632315 632944 . + . Parent=LTnewLM_300024000.1:pep;Name=PF12317;signature_desc=Intraflagellar transport complex B protein 46 C terminal;Ontology_term=GO:0042073 ### LTnewLM_30 AUGUSTUS gene 634929 636809 1 + . ID=LTnewLM_300024100 LTnewLM_30 AUGUSTUS mRNA 634929 636809 1 + . ID=LTnewLM_300024100.1;Parent=LTnewLM_300024100 LTnewLM_30 AUGUSTUS CDS 634929 636809 1 + 0 ID=LTnewLM_300024100.1:CDS:1;Parent=LTnewLM_300024100.1 ### LTnewLM_30 . polypeptide 634929 636809 . + . ID=LTnewLM_300024100.1:pep;Derives_from=LTnewLM_300024100.1;orthologous_to=LmjF.30.1780_mRNA;ortholog_cluster=OG0004212;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 635568 636056 . + . Parent=LTnewLM_300024100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 635898 636560 . + . Parent=LTnewLM_300024100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 640601 642844 1 + . ID=LTnewLM_300024200 LTnewLM_30 AUGUSTUS mRNA 640601 642844 1 + . ID=LTnewLM_300024200.1;Parent=LTnewLM_300024200 LTnewLM_30 AUGUSTUS CDS 640601 642844 1 + 0 ID=LTnewLM_300024200.1:CDS:1;Parent=LTnewLM_300024200.1 ### LTnewLM_30 . polypeptide 640601 642844 . + . ID=LTnewLM_300024200.1:pep;Derives_from=LTnewLM_300024200.1;orthologous_to=LmjF.30.1790_mRNA;ortholog_cluster=OG0004213;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_30 Pfam protein_match 640703 640876 . + . Parent=LTnewLM_300024200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_30 AUGUSTUS gene 645843 647252 1 + . ID=LTnewLM_300024300 LTnewLM_30 AUGUSTUS mRNA 645843 647252 1 + . ID=LTnewLM_300024300.1;Parent=LTnewLM_300024300 LTnewLM_30 AUGUSTUS CDS 645843 647252 1 + 0 ID=LTnewLM_300024300.1:CDS:1;Parent=LTnewLM_300024300.1 ### LTnewLM_30 . polypeptide 645843 647252 . + . ID=LTnewLM_300024300.1:pep;Derives_from=LTnewLM_300024300.1;orthologous_to=LmjF.30.1800_mRNA;ortholog_cluster=OG0004214;product=term%3DQueuine tRNA-ribosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01702;Ontology_term=GO:0006400,GO:0008479,GO:0008616 LTnewLM_30 Pfam protein_match 645909 646343 . + . Parent=LTnewLM_300024300.1:pep;Name=PF01702;signature_desc=Queuine tRNA-ribosyltransferase;Ontology_term=GO:0008479,GO:0006400,GO:0008616 LTnewLM_30 Pfam protein_match 646446 647183 . + . Parent=LTnewLM_300024300.1:pep;Name=PF01702;signature_desc=Queuine tRNA-ribosyltransferase;Ontology_term=GO:0008479,GO:0006400,GO:0008616 ### LTnewLM_30 AUGUSTUS gene 649213 665880 0.62 + . ID=LTnewLM_300024400 LTnewLM_30 AUGUSTUS mRNA 649213 665880 0.62 + . ID=LTnewLM_300024400.1;Parent=LTnewLM_300024400 LTnewLM_30 AUGUSTUS CDS 649213 662262 0.62 + 0 ID=LTnewLM_300024400.1:CDS:1;Parent=LTnewLM_300024400.1 LTnewLM_30 AUGUSTUS CDS 662305 665880 0.67 + 0 ID=LTnewLM_300024400.1:CDS:2;Parent=LTnewLM_300024400.1 ### LTnewLM_30 . polypeptide 649213 665880 . + . ID=LTnewLM_300024400.1:pep;Derives_from=LTnewLM_300024400.1;orthologous_to=LmjF.30.1810_mRNA;ortholog_cluster=OG0004215;product=term%3DFlagellar-associated PapD-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14874 LTnewLM_30 Pfam protein_match 649612 649911 . + . Parent=LTnewLM_300024400.1:pep;Name=PF14874;signature_desc=Flagellar-associated PapD-like LTnewLM_30 Pfam protein_match 651244 651498 . + . Parent=LTnewLM_300024400.1:pep;Name=PF14874;signature_desc=Flagellar-associated PapD-like LTnewLM_30 Pfam protein_match 654598 654738 . + . Parent=LTnewLM_300024400.1:pep;Name=PF14874;signature_desc=Flagellar-associated PapD-like ### LTnewLM_30 AUGUSTUS gene 667856 669721 1 + . ID=LTnewLM_300024500 LTnewLM_30 AUGUSTUS mRNA 667856 669721 1 + . ID=LTnewLM_300024500.1;Parent=LTnewLM_300024500 LTnewLM_30 AUGUSTUS CDS 667856 669721 1 + 0 ID=LTnewLM_300024500.1:CDS:1;Parent=LTnewLM_300024500.1 ### LTnewLM_30 . polypeptide 667856 669721 . + . ID=LTnewLM_300024500.1:pep;Derives_from=LTnewLM_300024500.1;orthologous_to=LmjF.30.1830_mRNA;ortholog_cluster=OG0004216;product=term%3DSF3a60/Prp9 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11931 LTnewLM_30 Pfam protein_match 669356 669706 . + . Parent=LTnewLM_300024500.1:pep;Name=PF11931;signature_desc=SF3a60/Prp9 C-terminal ### LTnewLM_30 AUGUSTUS gene 670691 673159 1 + . ID=LTnewLM_300024600 LTnewLM_30 AUGUSTUS mRNA 670691 673159 1 + . ID=LTnewLM_300024600.1;Parent=LTnewLM_300024600 LTnewLM_30 AUGUSTUS CDS 670691 673159 1 + 0 ID=LTnewLM_300024600.1:CDS:1;Parent=LTnewLM_300024600.1 ### LTnewLM_30 . polypeptide 670691 673159 . + . ID=LTnewLM_300024600.1:pep;Derives_from=LTnewLM_300024600.1;orthologous_to=LmjF.30.1840_mRNA;ortholog_cluster=OG0004217;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 676557 680681 1 + . ID=LTnewLM_300024700 LTnewLM_30 AUGUSTUS mRNA 676557 680681 1 + . ID=LTnewLM_300024700.1;Parent=LTnewLM_300024700 LTnewLM_30 AUGUSTUS CDS 676557 680681 1 + 0 ID=LTnewLM_300024700.1:CDS:1;Parent=LTnewLM_300024700.1 ### LTnewLM_30 . polypeptide 676557 680681 . + . ID=LTnewLM_300024700.1:pep;Derives_from=LTnewLM_300024700.1;orthologous_to=LmjF.30.1850_mRNA;ortholog_cluster=OG0004218;product=term%3DFYVE zinc finger/Phosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363|Pfam:PF00454;Ontology_term=GO:0046872,GO:0016773 LTnewLM_30 Pfam protein_match 677910 678143 . + . Parent=LTnewLM_300024700.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 679950 680087 . + . Parent=LTnewLM_300024700.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_30 AUGUSTUS gene 682219 683841 1 + . ID=LTnewLM_300024800 LTnewLM_30 AUGUSTUS mRNA 682219 683841 1 + . ID=LTnewLM_300024800.1;Parent=LTnewLM_300024800 LTnewLM_30 AUGUSTUS CDS 682219 683841 1 + 0 ID=LTnewLM_300024800.1:CDS:1;Parent=LTnewLM_300024800.1 ### LTnewLM_30 . polypeptide 682219 683841 . + . ID=LTnewLM_300024800.1:pep;Derives_from=LTnewLM_300024800.1;orthologous_to=LmjF.30.1860_mRNA;ortholog_cluster=OG0004219;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 685213 689031 1 + . ID=LTnewLM_300024900 LTnewLM_30 AUGUSTUS mRNA 685213 689031 1 + . ID=LTnewLM_300024900.1;Parent=LTnewLM_300024900 LTnewLM_30 AUGUSTUS CDS 685213 689031 1 + 0 ID=LTnewLM_300024900.1:CDS:1;Parent=LTnewLM_300024900.1 ### LTnewLM_30 . polypeptide 685213 689031 . + . ID=LTnewLM_300024900.1:pep;Derives_from=LTnewLM_300024900.1;orthologous_to=LmjF.30.1870_mRNA;ortholog_cluster=OG0004220;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 690217 690561 1 + . ID=LTnewLM_300025000 LTnewLM_30 AUGUSTUS mRNA 690217 690561 1 + . ID=LTnewLM_300025000.1;Parent=LTnewLM_300025000 LTnewLM_30 AUGUSTUS CDS 690217 690561 1 + 0 ID=LTnewLM_300025000.1:CDS:1;Parent=LTnewLM_300025000.1 ### LTnewLM_30 . polypeptide 690217 690561 . + . ID=LTnewLM_300025000.1:pep;Derives_from=LTnewLM_300025000.1;orthologous_to=LmjF.30.1880_mRNA;ortholog_cluster=OG0004221;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 691314 691856 1 + . ID=LTnewLM_300025100 LTnewLM_30 AUGUSTUS mRNA 691314 691856 1 + . ID=LTnewLM_300025100.1;Parent=LTnewLM_300025100 LTnewLM_30 AUGUSTUS CDS 691314 691856 1 + 0 ID=LTnewLM_300025100.1:CDS:1;Parent=LTnewLM_300025100.1 ### LTnewLM_30 . polypeptide 691314 691856 . + . ID=LTnewLM_300025100.1:pep;Derives_from=LTnewLM_300025100.1;orthologous_to=LmjF.30.1890_mRNA;ortholog_cluster=OG0004222;product=term%3DATPase family associated with various cellular activities (AAA)/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF13238|Pfam:PF13207;Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 691338 691436 . + . Parent=LTnewLM_300025100.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 691338 691706 . + . Parent=LTnewLM_300025100.1:pep;Name=PF13238;signature_desc=AAA domain LTnewLM_30 Pfam protein_match 691347 691694 . + . Parent=LTnewLM_300025100.1:pep;Name=PF13207;signature_desc=AAA domain ### LTnewLM_30 AUGUSTUS gene 693275 696322 1 + . ID=LTnewLM_300025200 LTnewLM_30 AUGUSTUS mRNA 693275 696322 1 + . ID=LTnewLM_300025200.1;Parent=LTnewLM_300025200 LTnewLM_30 AUGUSTUS CDS 693275 696322 1 + 0 ID=LTnewLM_300025200.1:CDS:1;Parent=LTnewLM_300025200.1 ### LTnewLM_30 . polypeptide 693275 696322 . + . ID=LTnewLM_300025200.1:pep;Derives_from=LTnewLM_300025200.1;orthologous_to=LmjF.30.1900_mRNA;ortholog_cluster=OG0004223;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 697347 699878 1 + . ID=LTnewLM_300025300 LTnewLM_30 AUGUSTUS mRNA 697347 699878 1 + . ID=LTnewLM_300025300.1;Parent=LTnewLM_300025300 LTnewLM_30 AUGUSTUS CDS 697347 699878 1 + 0 ID=LTnewLM_300025300.1:CDS:1;Parent=LTnewLM_300025300.1 ### LTnewLM_30 . polypeptide 697347 699878 . + . ID=LTnewLM_300025300.1:pep;Derives_from=LTnewLM_300025300.1;orthologous_to=LmjF.30.1920_mRNA;ortholog_cluster=OG0004224;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 702555 704052 0.89 + . ID=LTnewLM_300025400 LTnewLM_30 AUGUSTUS mRNA 702555 704052 0.89 + . ID=LTnewLM_300025400.1;Parent=LTnewLM_300025400 LTnewLM_30 AUGUSTUS CDS 702555 703094 0.9 + 0 ID=LTnewLM_300025400.1:CDS:1;Parent=LTnewLM_300025400.1 LTnewLM_30 AUGUSTUS CDS 703156 704052 0.9 + 0 ID=LTnewLM_300025400.1:CDS:2;Parent=LTnewLM_300025400.1 ### LTnewLM_30 . polypeptide 702555 704052 . + . ID=LTnewLM_300025400.1:pep;Derives_from=LTnewLM_300025400.1;orthologous_to=LTnewLM_300025500.1,LmjF.30.1930_mRNA,LmjF.30.1940_mRNA;ortholog_cluster=OG0000211;product=term%3DCoenzyme A transferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01144;Ontology_term=GO:0008152,GO:0008410 LTnewLM_30 Pfam protein_match 702597 703052 . + . Parent=LTnewLM_300025400.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 LTnewLM_30 Pfam protein_match 703089 703217 . + . Parent=LTnewLM_300025400.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 LTnewLM_30 Pfam protein_match 703320 703913 . + . Parent=LTnewLM_300025400.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 ### LTnewLM_30 AUGUSTUS gene 706800 708299 1 + . ID=LTnewLM_300025500 LTnewLM_30 AUGUSTUS mRNA 706800 708299 1 + . ID=LTnewLM_300025500.1;Parent=LTnewLM_300025500 LTnewLM_30 AUGUSTUS CDS 706800 708299 1 + 0 ID=LTnewLM_300025500.1:CDS:1;Parent=LTnewLM_300025500.1 ### LTnewLM_30 . polypeptide 706800 708299 . + . ID=LTnewLM_300025500.1:pep;Derives_from=LTnewLM_300025500.1;orthologous_to=LTnewLM_300025400.1,LmjF.30.1930_mRNA,LmjF.30.1940_mRNA;ortholog_cluster=OG0000211;product=term%3DCoenzyme A transferase/Acetyl-CoA hydrolase/transferase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01144|Pfam:PF13336;Ontology_term=GO:0008152,GO:0008410 LTnewLM_30 Pfam protein_match 706836 707522 . + . Parent=LTnewLM_300025500.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 LTnewLM_30 Pfam protein_match 707625 708221 . + . Parent=LTnewLM_300025500.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 LTnewLM_30 Pfam protein_match 707907 708194 . + . Parent=LTnewLM_300025500.1:pep;Name=PF13336;signature_desc=Acetyl-CoA hydrolase/transferase C-terminal domain ### LTnewLM_30 AUGUSTUS gene 710301 713798 1 + . ID=LTnewLM_300025600 LTnewLM_30 AUGUSTUS mRNA 710301 713798 1 + . ID=LTnewLM_300025600.1;Parent=LTnewLM_300025600 LTnewLM_30 AUGUSTUS CDS 710301 713798 1 + 0 ID=LTnewLM_300025600.1:CDS:1;Parent=LTnewLM_300025600.1 ### LTnewLM_30 . polypeptide 710301 713798 . + . ID=LTnewLM_300025600.1:pep;Derives_from=LTnewLM_300025600.1;orthologous_to=LmjF.30.1950_mRNA;ortholog_cluster=OG0004225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 715019 716620 1 + . ID=LTnewLM_300025700 LTnewLM_30 AUGUSTUS mRNA 715019 716620 1 + . ID=LTnewLM_300025700.1;Parent=LTnewLM_300025700 LTnewLM_30 AUGUSTUS CDS 715019 716620 1 + 0 ID=LTnewLM_300025700.1:CDS:1;Parent=LTnewLM_300025700.1 ### LTnewLM_30 . polypeptide 715019 716620 . + . ID=LTnewLM_300025700.1:pep;Derives_from=LTnewLM_300025700.1;orthologous_to=LmjF.30.1960_mRNA;ortholog_cluster=OG0004226;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_30 Pfam protein_match 715826 716224 . + . Parent=LTnewLM_300025700.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_30 AUGUSTUS gene 717370 718692 1 + . ID=LTnewLM_300025800 LTnewLM_30 AUGUSTUS mRNA 717370 718692 1 + . ID=LTnewLM_300025800.1;Parent=LTnewLM_300025800 LTnewLM_30 AUGUSTUS CDS 717370 718692 1 + 0 ID=LTnewLM_300025800.1:CDS:1;Parent=LTnewLM_300025800.1 ### LTnewLM_30 . polypeptide 717370 718692 . + . ID=LTnewLM_300025800.1:pep;Derives_from=LTnewLM_300025800.1;orthologous_to=LmjF.30.1970_mRNA;ortholog_cluster=OG0004227;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 721106 722398 1 + . ID=LTnewLM_300025900 LTnewLM_30 AUGUSTUS mRNA 721106 722398 1 + . ID=LTnewLM_300025900.1;Parent=LTnewLM_300025900 LTnewLM_30 AUGUSTUS CDS 721106 722398 1 + 0 ID=LTnewLM_300025900.1:CDS:1;Parent=LTnewLM_300025900.1 ### LTnewLM_30 . polypeptide 721106 722398 . + . ID=LTnewLM_300025900.1:pep;Derives_from=LTnewLM_300025900.1;orthologous_to=LmjF.30.1975_mRNA;ortholog_cluster=OG0004228;product=term%3DBILBO1 N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18281 LTnewLM_30 Pfam protein_match 721145 721408 . + . Parent=LTnewLM_300025900.1:pep;Name=PF18281;signature_desc=BILBO1 N-terminal domain ### LTnewLM_30 AUGUSTUS gene 723037 724062 1 + . ID=LTnewLM_300026000 LTnewLM_30 AUGUSTUS mRNA 723037 724062 1 + . ID=LTnewLM_300026000.1;Parent=LTnewLM_300026000 LTnewLM_30 AUGUSTUS CDS 723037 724062 1 + 0 ID=LTnewLM_300026000.1:CDS:1;Parent=LTnewLM_300026000.1 ### LTnewLM_30 . polypeptide 723037 724062 . + . ID=LTnewLM_300026000.1:pep;Derives_from=LTnewLM_300026000.1;orthologous_to=LmjF.30.1980_mRNA;ortholog_cluster=OG0004229;product=term%3DC2H2 type zinc-finger (2 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12756 LTnewLM_30 Pfam protein_match 723112 723375 . + . Parent=LTnewLM_300026000.1:pep;Name=PF12756;signature_desc=C2H2 type zinc-finger (2 copies) LTnewLM_30 Pfam protein_match 723604 723855 . + . Parent=LTnewLM_300026000.1:pep;Name=PF12756;signature_desc=C2H2 type zinc-finger (2 copies) ### LTnewLM_30 AUGUSTUS gene 724966 725931 1 + . ID=LTnewLM_300026100 LTnewLM_30 AUGUSTUS mRNA 724966 725931 1 + . ID=LTnewLM_300026100.1;Parent=LTnewLM_300026100 LTnewLM_30 AUGUSTUS CDS 724966 725931 1 + 0 ID=LTnewLM_300026100.1:CDS:1;Parent=LTnewLM_300026100.1 ### LTnewLM_30 . polypeptide 724966 725931 . + . ID=LTnewLM_300026100.1:pep;Derives_from=LTnewLM_300026100.1;orthologous_to=LmjF.30.1985_mRNA;ortholog_cluster=OG0004230;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 726828 733310 1 + . ID=LTnewLM_300026200 LTnewLM_30 AUGUSTUS mRNA 726828 733310 1 + . ID=LTnewLM_300026200.1;Parent=LTnewLM_300026200 LTnewLM_30 AUGUSTUS CDS 726828 733310 1 + 0 ID=LTnewLM_300026200.1:CDS:1;Parent=LTnewLM_300026200.1 ### LTnewLM_30 . polypeptide 726828 733310 . + . ID=LTnewLM_300026200.1:pep;Derives_from=LTnewLM_300026200.1;orthologous_to=LmjF.30.1990_mRNA;ortholog_cluster=OG0004231;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 734203 734592 1 + . ID=LTnewLM_300026300 LTnewLM_30 AUGUSTUS mRNA 734203 734592 1 + . ID=LTnewLM_300026300.1;Parent=LTnewLM_300026300 LTnewLM_30 AUGUSTUS CDS 734203 734592 1 + 0 ID=LTnewLM_300026300.1:CDS:1;Parent=LTnewLM_300026300.1 ### LTnewLM_30 . polypeptide 734203 734592 . + . ID=LTnewLM_300026300.1:pep;Derives_from=LTnewLM_300026300.1;orthologous_to=LmjF.30.2000_mRNA;ortholog_cluster=OG0004232;product=term%3DIntraflagellar transport complex B%2C subunit 20%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14931 LTnewLM_30 Pfam protein_match 734221 734571 . + . Parent=LTnewLM_300026300.1:pep;Name=PF14931;signature_desc=Intraflagellar transport complex B%2C subunit 20 ### LTnewLM_30 . pseudogene 736560 741053 . + . ID=LTnewLM_300026400:pseudogene;coverage=0.996;sequence_ID=0.891;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2010_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 736560 741053 . + . ID=LTnewLM_300026400.1;Parent=LTnewLM_300026400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 736560 741053 . + . ID=LTnewLM_300026400.1:pseudogenic_exon:1;Parent=LTnewLM_300026400.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 736560 741053 . + . ID=LTnewLM_300026400.1:pep;Derives_from=LTnewLM_300026400.1;orthologous_to=LmjF.30.2010_mRNA;ortholog_cluster=OG0007590;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . pseudogene 741401 742720 . + . ID=LTnewLM_300026500:pseudogene;coverage=0.994;sequence_ID=0.880;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2020_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 741401 742720 . + . ID=LTnewLM_300026500.1;Parent=LTnewLM_300026500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 741401 742720 . + . ID=LTnewLM_300026500.1:pseudogenic_exon:1;Parent=LTnewLM_300026500.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 741401 742720 . + . ID=LTnewLM_300026500.1:pep;Derives_from=LTnewLM_300026500.1;orthologous_to=LmjF.30.2020_mRNA;ortholog_cluster=OG0007591;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 742812 743159 1 + . ID=LTnewLM_300026600 LTnewLM_30 AUGUSTUS mRNA 742812 743159 1 + . ID=LTnewLM_300026600.1;Parent=LTnewLM_300026600 LTnewLM_30 AUGUSTUS CDS 742812 743159 1 + 0 ID=LTnewLM_300026600.1:CDS:1;Parent=LTnewLM_300026600.1 ### LTnewLM_30 . polypeptide 742812 743159 . + . ID=LTnewLM_300026600.1:pep;Derives_from=LTnewLM_300026600.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 744141 745439 1 + . ID=LTnewLM_300026700 LTnewLM_30 AUGUSTUS mRNA 744141 745439 1 + . ID=LTnewLM_300026700.1;Parent=LTnewLM_300026700 LTnewLM_30 AUGUSTUS CDS 744141 745439 1 + 0 ID=LTnewLM_300026700.1:CDS:1;Parent=LTnewLM_300026700.1 ### LTnewLM_30 . polypeptide 744141 745439 . + . ID=LTnewLM_300026700.1:pep;Derives_from=LTnewLM_300026700.1;orthologous_to=LmjF.30.2030_mRNA;ortholog_cluster=OG0004233;product=term%3DGPI transamidase subunit PIG-U/Glycosyltransferase family 87/Mannosyltransferase (PIG-M)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06728|Pfam:PF09594|Pfam:PF05007;Ontology_term=GO:0005789,GO:0006506,GO:0016758,GO:0016021 LTnewLM_30 Pfam protein_match 744285 745133 . + . Parent=LTnewLM_300026700.1:pep;Name=PF06728;signature_desc=GPI transamidase subunit PIG-U;Ontology_term=GO:0006506,GO:0016021 LTnewLM_30 Pfam protein_match 744342 744863 . + . Parent=LTnewLM_300026700.1:pep;Name=PF09594;signature_desc=Glycosyltransferase family 87;Ontology_term=GO:0016758 LTnewLM_30 Pfam protein_match 744540 745346 . + . Parent=LTnewLM_300026700.1:pep;Name=PF05007;signature_desc=Mannosyltransferase (PIG-M);Ontology_term=GO:0016758,GO:0006506,GO:0005789,GO:0016021 ### LTnewLM_30 Liftoff gene 746198 751685 . + . ID=LTnewLM_300026800;coverage=0.993;sequence_ID=0.920;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.2040_0 LTnewLM_30 Liftoff mRNA 746198 751685 . + . ID=LTnewLM_300026800.1;Parent=LTnewLM_300026800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 746198 747272 . + . ID=LTnewLM_300026800:five_prime_UTR;Parent=LTnewLM_300026800.1;extra_copy_number=0 LTnewLM_30 Liftoff CDS 747273 751685 . + 0 ID=LTnewLM_300026800.1:CDS:1;Parent=LTnewLM_300026800.1;extra_copy_number=0 LTnewLM_30 Liftoff mRNA 747487 751685 . + . ID=LTnewLM_300026800.2;Parent=LTnewLM_300026800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 747487 747620 . + . ID=LTnewLM_300026800:five_prime_UTR.1;Parent=LTnewLM_300026800.2;extra_copy_number=0 LTnewLM_30 Liftoff CDS 747621 751685 . + 0 ID=LTnewLM_300026800.2:CDS:1;Parent=LTnewLM_300026800.2;extra_copy_number=0 ### LTnewLM_30 . polypeptide 747273 751685 . + . ID=LTnewLM_300026800.1:pep;Derives_from=LTnewLM_300026800.1;orthologous_to=LTnewLM_300026800.2,LmjF.30.2040.1_mRNA,LmjF.30.2040.2_mRNA;ortholog_cluster=OG0000212;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_30 Pfam protein_match 748890 749084 . + . Parent=LTnewLM_300026800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_30 Pfam protein_match 749274 749705 . + . Parent=LTnewLM_300026800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_30 . polypeptide 747621 751685 . + . ID=LTnewLM_300026800.2:pep;Derives_from=LTnewLM_300026800.2;orthologous_to=LTnewLM_300026800.1,LmjF.30.2040.1_mRNA,LmjF.30.2040.2_mRNA;ortholog_cluster=OG0000212;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_30 Pfam protein_match 748890 749084 . + . Parent=LTnewLM_300026800.2:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_30 Pfam protein_match 749274 749705 . + . Parent=LTnewLM_300026800.2:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_30 AUGUSTUS gene 753352 754034 0.65 + . ID=LTnewLM_300026900 LTnewLM_30 AUGUSTUS mRNA 753352 754034 0.65 + . ID=LTnewLM_300026900.1;Parent=LTnewLM_300026900 LTnewLM_30 AUGUSTUS CDS 753352 753413 0.65 + 0 ID=LTnewLM_300026900.1:CDS:1;Parent=LTnewLM_300026900.1 LTnewLM_30 AUGUSTUS CDS 753581 754034 0.65 + 1 ID=LTnewLM_300026900.1:CDS:2;Parent=LTnewLM_300026900.1 ### LTnewLM_30 . polypeptide 753352 754034 . + . ID=LTnewLM_300026900.1:pep;Derives_from=LTnewLM_300026900.1;orthologous_to=LmjF.30.2050_mRNA;ortholog_cluster=OG0004234;product=term%3DEukaryotic cytochrome b561%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03188;Ontology_term=GO:0016021 LTnewLM_30 Pfam protein_match 753484 753771 . + . Parent=LTnewLM_300026900.1:pep;Name=PF03188;signature_desc=Eukaryotic cytochrome b561;Ontology_term=GO:0016021 ### LTnewLM_30 AUGUSTUS gene 756522 760148 1 + . ID=LTnewLM_300027000 LTnewLM_30 AUGUSTUS mRNA 756522 760148 1 + . ID=LTnewLM_300027000.1;Parent=LTnewLM_300027000 LTnewLM_30 AUGUSTUS CDS 756522 760148 1 + 0 ID=LTnewLM_300027000.1:CDS:1;Parent=LTnewLM_300027000.1 ### LTnewLM_30 . polypeptide 756522 760148 . + . ID=LTnewLM_300027000.1:pep;Derives_from=LTnewLM_300027000.1;orthologous_to=LmjF.30.2060_mRNA;ortholog_cluster=OG0004235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 761449 762390 1 + . ID=LTnewLM_300027100 LTnewLM_30 AUGUSTUS mRNA 761449 762390 1 + . ID=LTnewLM_300027100.1;Parent=LTnewLM_300027100 LTnewLM_30 AUGUSTUS CDS 761449 762390 1 + 0 ID=LTnewLM_300027100.1:CDS:1;Parent=LTnewLM_300027100.1 ### LTnewLM_30 . polypeptide 761449 762390 . + . ID=LTnewLM_300027100.1:pep;Derives_from=LTnewLM_300027100.1;orthologous_to=LmjF.30.2065_mRNA;ortholog_cluster=OG0004236;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 763462 764088 1 + . ID=LTnewLM_300027200 LTnewLM_30 AUGUSTUS mRNA 763462 764088 1 + . ID=LTnewLM_300027200.1;Parent=LTnewLM_300027200 LTnewLM_30 AUGUSTUS CDS 763462 764088 1 + 0 ID=LTnewLM_300027200.1:CDS:1;Parent=LTnewLM_300027200.1 ### LTnewLM_30 . polypeptide 763462 764088 . + . ID=LTnewLM_300027200.1:pep;Derives_from=LTnewLM_300027200.1;orthologous_to=LmjF.30.2070_mRNA;ortholog_cluster=OG0004237;product=term%3DNFACT protein RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05670 LTnewLM_30 Pfam protein_match 763462 763788 . + . Parent=LTnewLM_300027200.1:pep;Name=PF05670;signature_desc=NFACT protein RNA binding domain ### LTnewLM_30 AUGUSTUS gene 764796 766508 1 + . ID=LTnewLM_300027300 LTnewLM_30 AUGUSTUS mRNA 764796 766508 1 + . ID=LTnewLM_300027300.1;Parent=LTnewLM_300027300 LTnewLM_30 AUGUSTUS CDS 764796 766508 1 + 0 ID=LTnewLM_300027300.1:CDS:1;Parent=LTnewLM_300027300.1 ### LTnewLM_30 . polypeptide 764796 766508 . + . ID=LTnewLM_300027300.1:pep;Derives_from=LTnewLM_300027300.1;orthologous_to=LmjF.30.2080_mRNA;ortholog_cluster=OG0004238;product=term%3DSporulation stage III%2C protein AA%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19568 LTnewLM_30 Pfam protein_match 765486 765929 . + . Parent=LTnewLM_300027300.1:pep;Name=PF19568;signature_desc=Sporulation stage III%2C protein AA ### LTnewLM_30 AUGUSTUS gene 768778 769449 1 + . ID=LTnewLM_300027400 LTnewLM_30 AUGUSTUS mRNA 768778 769449 1 + . ID=LTnewLM_300027400.1;Parent=LTnewLM_300027400 LTnewLM_30 AUGUSTUS CDS 768778 769449 1 + 0 ID=LTnewLM_300027400.1:CDS:1;Parent=LTnewLM_300027400.1 ### LTnewLM_30 . polypeptide 768778 769449 . + . ID=LTnewLM_300027400.1:pep;Derives_from=LTnewLM_300027400.1;orthologous_to=LTnewLM_280024900.1,LmjF.28.1810_mRNA;ortholog_cluster=OG0000420;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 770181 771404 1 + . ID=LTnewLM_300027500 LTnewLM_30 AUGUSTUS mRNA 770181 771404 1 + . ID=LTnewLM_300027500.1;Parent=LTnewLM_300027500 LTnewLM_30 AUGUSTUS CDS 770181 771404 1 + 0 ID=LTnewLM_300027500.1:CDS:1;Parent=LTnewLM_300027500.1 ### LTnewLM_30 . polypeptide 770181 771404 . + . ID=LTnewLM_300027500.1:pep;Derives_from=LTnewLM_300027500.1;orthologous_to=LmjF.30.2090_mRNA;ortholog_cluster=OG0004239;product=term%3DIron-containing alcohol dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00465|Pfam:PF13685;Ontology_term=GO:0055114,GO:0016491,GO:0046872 LTnewLM_30 Pfam protein_match 770271 771374 . + . Parent=LTnewLM_300027500.1:pep;Name=PF00465;signature_desc=Iron-containing alcohol dehydrogenase;Ontology_term=GO:0016491,GO:0046872,GO:0055114 LTnewLM_30 Pfam protein_match 770283 770579 . + . Parent=LTnewLM_300027500.1:pep;Name=PF13685;signature_desc=Iron-containing alcohol dehydrogenase ### LTnewLM_30 Aragorn_1.2.36 gene 771766 771837 . - . ID=LTnewLM_300027600 LTnewLM_30 Aragorn_1.2.36 tRNA 771766 771837 . - . ID=LTnewLM_300027600:tRNA;Parent=LTnewLM_300027600;aa=Thr;anticodon=cgt;gc_content=61.1 ### LTnewLM_30 AUGUSTUS gene 772208 774118 1 - . ID=LTnewLM_300027700 LTnewLM_30 AUGUSTUS mRNA 772208 774118 1 - . ID=LTnewLM_300027700.1;Parent=LTnewLM_300027700 LTnewLM_30 AUGUSTUS CDS 772208 774118 1 - 0 ID=LTnewLM_300027700.1:CDS:1;Parent=LTnewLM_300027700.1 ### LTnewLM_30 . polypeptide 772208 774118 . - . ID=LTnewLM_300027700.1:pep;Derives_from=LTnewLM_300027700.1;orthologous_to=LmjF.30.2100_mRNA;ortholog_cluster=OG0004240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 775402 777012 1 - . ID=LTnewLM_300027800 LTnewLM_30 AUGUSTUS mRNA 775402 777012 1 - . ID=LTnewLM_300027800.1;Parent=LTnewLM_300027800 LTnewLM_30 AUGUSTUS CDS 775402 777012 1 - 0 ID=LTnewLM_300027800.1:CDS:1;Parent=LTnewLM_300027800.1 ### LTnewLM_30 . polypeptide 775402 777012 . - . ID=LTnewLM_300027800.1:pep;Derives_from=LTnewLM_300027800.1;orthologous_to=LmjF.30.2110_mRNA;ortholog_cluster=OG0004241;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 778406 779506 . - . ID=LTnewLM_300027900;coverage=1.0;sequence_ID=0.939;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.2120_0 LTnewLM_30 Liftoff mRNA 778406 779506 . - . ID=LTnewLM_300027900.1;Parent=LTnewLM_300027900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 778406 779506 . - 0 ID=LTnewLM_300027900.1:CDS:1;Parent=LTnewLM_300027900.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 778406 779506 . - . ID=LTnewLM_300027900.1:pep;Derives_from=LTnewLM_300027900.1;orthologous_to=LmjF.30.2120_mRNA;ortholog_cluster=OG0004242;product=term%3DRibosomal silencing factor during starvation%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02410 LTnewLM_30 Pfam protein_match 778571 778855 . - . Parent=LTnewLM_300027900.1:pep;Name=PF02410;signature_desc=Ribosomal silencing factor during starvation ### LTnewLM_30 AUGUSTUS gene 781231 784197 1 - . ID=LTnewLM_300028000 LTnewLM_30 AUGUSTUS mRNA 781231 784197 1 - . ID=LTnewLM_300028000.1;Parent=LTnewLM_300028000 LTnewLM_30 AUGUSTUS CDS 781231 784197 1 - 0 ID=LTnewLM_300028000.1:CDS:1;Parent=LTnewLM_300028000.1 ### LTnewLM_30 . polypeptide 781231 784197 . - . ID=LTnewLM_300028000.1:pep;Derives_from=LTnewLM_300028000.1;orthologous_to=LmjF.30.2130_mRNA;ortholog_cluster=OG0004243;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Right handed beta helix region/Periplasmic copper-binding protein (NosD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF13229|Pfam:PF05048;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 781246 781671 . - . Parent=LTnewLM_300028000.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_30 Pfam protein_match 781264 781704 . - . Parent=LTnewLM_300028000.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_30 Pfam protein_match 781666 782193 . - . Parent=LTnewLM_300028000.1:pep;Name=PF13229;signature_desc=Right handed beta helix region LTnewLM_30 Pfam protein_match 781693 781947 . - . Parent=LTnewLM_300028000.1:pep;Name=PF05048;signature_desc=Periplasmic copper-binding protein (NosD) LTnewLM_30 Pfam protein_match 783115 783672 . - . Parent=LTnewLM_300028000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 783121 783675 . - . Parent=LTnewLM_300028000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 783955 784188 . - . Parent=LTnewLM_300028000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 785716 788388 1 - . ID=LTnewLM_300028100 LTnewLM_30 AUGUSTUS mRNA 785716 788388 1 - . ID=LTnewLM_300028100.1;Parent=LTnewLM_300028100 LTnewLM_30 AUGUSTUS CDS 785716 788388 1 - 0 ID=LTnewLM_300028100.1:CDS:1;Parent=LTnewLM_300028100.1 ### LTnewLM_30 . polypeptide 785716 788388 . - . ID=LTnewLM_300028100.1:pep;Derives_from=LTnewLM_300028100.1;orthologous_to=LmjF.30.2140_mRNA;ortholog_cluster=OG0004244;product=term%3DDomain of unknown function (DUF3336)/Patatin-like phospholipase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11815|Pfam:PF01734;Ontology_term=GO:0006629 LTnewLM_30 Pfam protein_match 786193 786789 . - . Parent=LTnewLM_300028100.1:pep;Name=PF01734;signature_desc=Patatin-like phospholipase;Ontology_term=GO:0006629 LTnewLM_30 Pfam protein_match 787699 788037 . - . Parent=LTnewLM_300028100.1:pep;Name=PF11815;signature_desc=Domain of unknown function (DUF3336) ### LTnewLM_30 AUGUSTUS gene 789521 792250 1 - . ID=LTnewLM_300028200 LTnewLM_30 AUGUSTUS mRNA 789521 792250 1 - . ID=LTnewLM_300028200.1;Parent=LTnewLM_300028200 LTnewLM_30 AUGUSTUS CDS 789521 792250 1 - 0 ID=LTnewLM_300028200.1:CDS:1;Parent=LTnewLM_300028200.1 ### LTnewLM_30 . polypeptide 789521 792250 . - . ID=LTnewLM_300028200.1:pep;Derives_from=LTnewLM_300028200.1;orthologous_to=LmjF.30.2150_mRNA;ortholog_cluster=OG0004245;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 793055 795331 0.74 - . ID=LTnewLM_300028300 LTnewLM_30 AUGUSTUS mRNA 793055 795331 0.74 - . ID=LTnewLM_300028300.1;Parent=LTnewLM_300028300 LTnewLM_30 AUGUSTUS CDS 793055 795331 0.74 - 0 ID=LTnewLM_300028300.1:CDS:1;Parent=LTnewLM_300028300.1 ### LTnewLM_30 . polypeptide 793055 795331 . - . ID=LTnewLM_300028300.1:pep;Derives_from=LTnewLM_300028300.1;orthologous_to=LmjF.30.2160_mRNA;ortholog_cluster=OG0004246;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 797693 799273 1 - . ID=LTnewLM_300028400 LTnewLM_30 AUGUSTUS mRNA 797693 799273 1 - . ID=LTnewLM_300028400.1;Parent=LTnewLM_300028400 LTnewLM_30 AUGUSTUS CDS 797693 799273 1 - 0 ID=LTnewLM_300028400.1:CDS:1;Parent=LTnewLM_300028400.1 ### LTnewLM_30 . polypeptide 797693 799273 . - . ID=LTnewLM_300028400.1:pep;Derives_from=LTnewLM_300028400.1;orthologous_to=LmjF.30.2170_mRNA;ortholog_cluster=OG0004247;product=term%3DIBR domain%2C a half RING-finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01485;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 798248 798364 . - . Parent=LTnewLM_300028400.1:pep;Name=PF01485;signature_desc=IBR domain%2C a half RING-finger domain;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 798434 798625 . - . Parent=LTnewLM_300028400.1:pep;Name=PF01485;signature_desc=IBR domain%2C a half RING-finger domain;Ontology_term=GO:0008270 ### LTnewLM_30 AUGUSTUS gene 808188 809699 1 - . ID=LTnewLM_300028500 LTnewLM_30 AUGUSTUS mRNA 808188 809699 1 - . ID=LTnewLM_300028500.1;Parent=LTnewLM_300028500 LTnewLM_30 AUGUSTUS CDS 808188 809699 1 - 0 ID=LTnewLM_300028500.1:CDS:1;Parent=LTnewLM_300028500.1 ### LTnewLM_30 . polypeptide 808188 809699 . - . ID=LTnewLM_300028500.1:pep;Derives_from=LTnewLM_300028500.1;orthologous_to=LmjF.30.2180_mRNA;ortholog_cluster=OG0004248;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 809211 809408 . - . Parent=LTnewLM_300028500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 809493 809681 . - . Parent=LTnewLM_300028500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 814799 816298 1 - . ID=LTnewLM_300028600 LTnewLM_30 AUGUSTUS mRNA 814799 816298 1 - . ID=LTnewLM_300028600.1;Parent=LTnewLM_300028600 LTnewLM_30 AUGUSTUS CDS 814799 816298 1 - 0 ID=LTnewLM_300028600.1:CDS:1;Parent=LTnewLM_300028600.1 ### LTnewLM_30 . polypeptide 814799 816298 . - . ID=LTnewLM_300028600.1:pep;Derives_from=LTnewLM_300028600.1;orthologous_to=LmjF.30.2190_mRNA;ortholog_cluster=OG0004249;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 815828 816010 . - . Parent=LTnewLM_300028600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 816098 816283 . - . Parent=LTnewLM_300028600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 828524 829033 1 - . ID=LTnewLM_300028700 LTnewLM_30 AUGUSTUS mRNA 828524 829033 1 - . ID=LTnewLM_300028700.1;Parent=LTnewLM_300028700 LTnewLM_30 AUGUSTUS CDS 828524 829033 1 - 0 ID=LTnewLM_300028700.1:CDS:1;Parent=LTnewLM_300028700.1 ### LTnewLM_30 . polypeptide 828524 829033 . - . ID=LTnewLM_300028700.1:pep;Derives_from=LTnewLM_300028700.1;orthologous_to=LmjF.30.2200_mRNA;ortholog_cluster=OG0004250;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)/RNA-binding%2C Nab2-type zinc finger/CCCH-type zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642|Pfam:PF14608|Pfam:PF18044;Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 828842 828916 . - . Parent=LTnewLM_300028700.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 828848 828904 . - . Parent=LTnewLM_300028700.1:pep;Name=PF18044;signature_desc=CCCH-type zinc finger LTnewLM_30 Pfam protein_match 828848 828907 . - . Parent=LTnewLM_300028700.1:pep;Name=PF14608;signature_desc=RNA-binding%2C Nab2-type zinc finger ### LTnewLM_30 . pseudogene 830276 837658 . - . ID=LTnewLM_300028800:pseudogene;coverage=1.0;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2210_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 830276 837658 . - . ID=LTnewLM_300028800.1;Parent=LTnewLM_300028800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 830276 837658 . - . ID=LTnewLM_300028800.1:pseudogenic_exon:1;Parent=LTnewLM_300028800.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 830276 837658 . - . ID=LTnewLM_300028800.1:pep;Derives_from=LTnewLM_300028800.1;orthologous_to=LmjF.30.2210_mRNA;ortholog_cluster=OG0007592;product=term%3DDNAJ protein RME-8 N-terminal/GYF domain 2/DnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19432|Pfam:PF14237|Pfam:PF00226 LTnewLM_30 Pfam protein_match 833351 833494 . - . Parent=LTnewLM_300028800.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_30 Pfam protein_match 834329 834475 . - . Parent=LTnewLM_300028800.1:pep;Name=PF14237;signature_desc=GYF domain 2 LTnewLM_30 Pfam protein_match 834884 837577 . - . Parent=LTnewLM_300028800.1:pep;Name=PF19432;signature_desc=DNAJ protein RME-8 N-terminal ### LTnewLM_30 Liftoff gene 839461 841401 . - . ID=LTnewLM_300028900;coverage=0.992;sequence_ID=0.939;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.2220_0 LTnewLM_30 Liftoff mRNA 839461 841401 . - . ID=LTnewLM_300028900.1;Parent=LTnewLM_300028900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 839461 841401 . - 0 ID=LTnewLM_300028900.1:CDS:1;Parent=LTnewLM_300028900.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 839461 841401 . - . ID=LTnewLM_300028900.1:pep;Derives_from=LTnewLM_300028900.1;orthologous_to=LmjF.30.2220_mRNA;ortholog_cluster=OG0004251;product=term%3DRMND1/Sif2-Sif3/Mrx10%2C DUF155%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02582 LTnewLM_30 Pfam protein_match 839623 840228 . - . Parent=LTnewLM_300028900.1:pep;Name=PF02582;signature_desc=RMND1/Sif2-Sif3/Mrx10%2C DUF155 ### LTnewLM_30 AUGUSTUS gene 842723 843478 1 - . ID=LTnewLM_300029000 LTnewLM_30 AUGUSTUS mRNA 842723 843478 1 - . ID=LTnewLM_300029000.1;Parent=LTnewLM_300029000 LTnewLM_30 AUGUSTUS CDS 842723 843478 1 - 0 ID=LTnewLM_300029000.1:CDS:1;Parent=LTnewLM_300029000.1 ### LTnewLM_30 . polypeptide 842723 843478 . - . ID=LTnewLM_300029000.1:pep;Derives_from=LTnewLM_300029000.1;orthologous_to=LmjF.30.2230_mRNA;ortholog_cluster=OG0004252;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 845890 846810 1 - . ID=LTnewLM_300029100 LTnewLM_30 AUGUSTUS mRNA 845890 846810 1 - . ID=LTnewLM_300029100.1;Parent=LTnewLM_300029100 LTnewLM_30 AUGUSTUS CDS 845890 846810 1 - 0 ID=LTnewLM_300029100.1:CDS:1;Parent=LTnewLM_300029100.1 ### LTnewLM_30 . polypeptide 845890 846810 . - . ID=LTnewLM_300029100.1:pep;Derives_from=LTnewLM_300029100.1;orthologous_to=LmjF.30.2240_mRNA;ortholog_cluster=OG0004253;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 848196 849311 1 - . ID=LTnewLM_300029200 LTnewLM_30 AUGUSTUS mRNA 848196 849311 1 - . ID=LTnewLM_300029200.1;Parent=LTnewLM_300029200 LTnewLM_30 AUGUSTUS CDS 848196 849311 1 - 0 ID=LTnewLM_300029200.1:CDS:1;Parent=LTnewLM_300029200.1 ### LTnewLM_30 . polypeptide 848196 849311 . - . ID=LTnewLM_300029200.1:pep;Derives_from=LTnewLM_300029200.1;orthologous_to=LmjF.30.2250_mRNA;ortholog_cluster=OG0004254;product=term%3DC2H2-type zinc finger/C2H2 type zinc-finger (2 copies)/Zinc-finger double-stranded RNA-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13912|Pfam:PF12756|Pfam:PF12171 LTnewLM_30 Pfam protein_match 848571 848840 . - . Parent=LTnewLM_300029200.1:pep;Name=PF12756;signature_desc=C2H2 type zinc-finger (2 copies) LTnewLM_30 Pfam protein_match 849030 849122 . - . Parent=LTnewLM_300029200.1:pep;Name=PF12756;signature_desc=C2H2 type zinc-finger (2 copies) LTnewLM_30 Pfam protein_match 849048 849119 . - . Parent=LTnewLM_300029200.1:pep;Name=PF12171;signature_desc=Zinc-finger double-stranded RNA-binding LTnewLM_30 Pfam protein_match 849066 849122 . - . Parent=LTnewLM_300029200.1:pep;Name=PF13912;signature_desc=C2H2-type zinc finger ### LTnewLM_30 AUGUSTUS gene 851104 855449 0.6 - . ID=LTnewLM_300029300 LTnewLM_30 AUGUSTUS mRNA 851104 855449 0.6 - . ID=LTnewLM_300029300.1;Parent=LTnewLM_300029300 LTnewLM_30 AUGUSTUS CDS 851104 855289 0.6 - 1 ID=LTnewLM_300029300.1:CDS:1;Parent=LTnewLM_300029300.1 LTnewLM_30 AUGUSTUS CDS 855388 855449 0.96 - 0 ID=LTnewLM_300029300.1:CDS:2;Parent=LTnewLM_300029300.1 ### LTnewLM_30 . polypeptide 851104 855449 . - . ID=LTnewLM_300029300.1:pep;Derives_from=LTnewLM_300029300.1;orthologous_to=LmjF.30.2260_mRNA;ortholog_cluster=OG0004255;product=term%3DPhospholipid-translocating ATPase N-terminal/Cation transport ATPase (P-type)/Phospholipid-translocating P-type ATPase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16209|Pfam:PF13246|Pfam:PF16212 LTnewLM_30 Pfam protein_match 851418 852140 . - . Parent=LTnewLM_300029300.1:pep;Name=PF16212;signature_desc=Phospholipid-translocating P-type ATPase C-terminal LTnewLM_30 Pfam protein_match 853194 853529 . - . Parent=LTnewLM_300029300.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_30 Pfam protein_match 854844 855008 . - . Parent=LTnewLM_300029300.1:pep;Name=PF16209;signature_desc=Phospholipid-translocating ATPase N-terminal ### LTnewLM_30 AUGUSTUS gene 856751 861847 1 - . ID=LTnewLM_300029400 LTnewLM_30 AUGUSTUS mRNA 856751 861847 1 - . ID=LTnewLM_300029400.1;Parent=LTnewLM_300029400 LTnewLM_30 AUGUSTUS CDS 856751 861847 1 - 0 ID=LTnewLM_300029400.1:CDS:1;Parent=LTnewLM_300029400.1 ### LTnewLM_30 . polypeptide 856751 861847 . - . ID=LTnewLM_300029400.1:pep;Derives_from=LTnewLM_300029400.1;orthologous_to=LmjF.30.2270_mRNA;ortholog_cluster=OG0004256;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 863343 865457 1 - . ID=LTnewLM_300029500 LTnewLM_30 AUGUSTUS mRNA 863343 865457 1 - . ID=LTnewLM_300029500.1;Parent=LTnewLM_300029500 LTnewLM_30 AUGUSTUS CDS 863343 865457 1 - 0 ID=LTnewLM_300029500.1:CDS:1;Parent=LTnewLM_300029500.1 ### LTnewLM_30 . polypeptide 863343 865457 . - . ID=LTnewLM_300029500.1:pep;Derives_from=LTnewLM_300029500.1;orthologous_to=LmjF.30.2280_mRNA;ortholog_cluster=OG0004257;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_30 Pfam protein_match 863763 864032 . - . Parent=LTnewLM_300029500.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 LTnewLM_30 Pfam protein_match 864429 864968 . - . Parent=LTnewLM_300029500.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_30 AUGUSTUS gene 867513 870686 0.87 - . ID=LTnewLM_300029600 LTnewLM_30 AUGUSTUS mRNA 867513 870686 0.87 - . ID=LTnewLM_300029600.1;Parent=LTnewLM_300029600 LTnewLM_30 AUGUSTUS CDS 867513 870686 0.87 - 0 ID=LTnewLM_300029600.1:CDS:1;Parent=LTnewLM_300029600.1 ### LTnewLM_30 . polypeptide 867513 870686 . - . ID=LTnewLM_300029600.1:pep;Derives_from=LTnewLM_300029600.1;orthologous_to=LmjF.24.1530_mRNA,LmjF.30.2290_mRNA;ortholog_cluster=OG0000434;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_30 Pfam protein_match 868731 868931 . - . Parent=LTnewLM_300029600.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_30 Pfam protein_match 869529 870131 . - . Parent=LTnewLM_300029600.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_30 AUGUSTUS gene 871507 875421 1 - . ID=LTnewLM_300029700 LTnewLM_30 AUGUSTUS mRNA 871507 875421 1 - . ID=LTnewLM_300029700.1;Parent=LTnewLM_300029700 LTnewLM_30 AUGUSTUS CDS 871507 875421 1 - 0 ID=LTnewLM_300029700.1:CDS:1;Parent=LTnewLM_300029700.1 ### LTnewLM_30 . polypeptide 871507 875421 . - . ID=LTnewLM_300029700.1:pep;Derives_from=LTnewLM_300029700.1;orthologous_to=LmjF.30.2300_mRNA;ortholog_cluster=OG0004258;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 876066 877460 1 - . ID=LTnewLM_300029800 LTnewLM_30 AUGUSTUS mRNA 876066 877460 1 - . ID=LTnewLM_300029800.1;Parent=LTnewLM_300029800 LTnewLM_30 AUGUSTUS CDS 876066 877460 1 - 0 ID=LTnewLM_300029800.1:CDS:1;Parent=LTnewLM_300029800.1 ### LTnewLM_30 . polypeptide 876066 877460 . - . ID=LTnewLM_300029800.1:pep;Derives_from=LTnewLM_300029800.1;orthologous_to=LmjF.30.2310_mRNA;ortholog_cluster=OG0004259;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 878326 879390 1 - . ID=LTnewLM_300029900 LTnewLM_30 AUGUSTUS mRNA 878326 879390 1 - . ID=LTnewLM_300029900.1;Parent=LTnewLM_300029900 LTnewLM_30 AUGUSTUS CDS 878326 879390 1 - 0 ID=LTnewLM_300029900.1:CDS:1;Parent=LTnewLM_300029900.1 ### LTnewLM_30 . polypeptide 878326 879390 . - . ID=LTnewLM_300029900.1:pep;Derives_from=LTnewLM_300029900.1;orthologous_to=LmjF.30.2320_mRNA;ortholog_cluster=OG0004260;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 878449 879315 . - . Parent=LTnewLM_300029900.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 882610 883659 1 - . ID=LTnewLM_300030000 LTnewLM_30 AUGUSTUS mRNA 882610 883659 1 - . ID=LTnewLM_300030000.1;Parent=LTnewLM_300030000 LTnewLM_30 AUGUSTUS CDS 882610 883659 1 - 0 ID=LTnewLM_300030000.1:CDS:1;Parent=LTnewLM_300030000.1 ### LTnewLM_30 . polypeptide 882610 883659 . - . ID=LTnewLM_300030000.1:pep;Derives_from=LTnewLM_300030000.1;orthologous_to=LmjF.30.2330_mRNA;ortholog_cluster=OG0004261;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 885150 888668 1 - . ID=LTnewLM_300030100 LTnewLM_30 AUGUSTUS mRNA 885150 888668 1 - . ID=LTnewLM_300030100.1;Parent=LTnewLM_300030100 LTnewLM_30 AUGUSTUS CDS 885150 888668 1 - 0 ID=LTnewLM_300030100.1:CDS:1;Parent=LTnewLM_300030100.1 ### LTnewLM_30 . polypeptide 885150 888668 . - . ID=LTnewLM_300030100.1:pep;Derives_from=LTnewLM_300030100.1;orthologous_to=LmjF.30.2340_mRNA;ortholog_cluster=OG0004262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 891798 893411 1 - . ID=LTnewLM_300030200 LTnewLM_30 AUGUSTUS mRNA 891798 893411 1 - . ID=LTnewLM_300030200.1;Parent=LTnewLM_300030200 LTnewLM_30 AUGUSTUS CDS 891798 893411 1 - 0 ID=LTnewLM_300030200.1:CDS:1;Parent=LTnewLM_300030200.1 ### LTnewLM_30 . polypeptide 891798 893411 . - . ID=LTnewLM_300030200.1:pep;Derives_from=LTnewLM_300030200.1;orthologous_to=LmjF.30.2350_mRNA;ortholog_cluster=OG0004263;product=term%3DPyridoxal-dependent decarboxylase conserved domain/Aminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00282|Pfam:PF00266;Ontology_term=GO:0030170,GO:0019752,GO:0008152,GO:0016831 LTnewLM_30 Pfam protein_match 892128 893045 . - . Parent=LTnewLM_300030200.1:pep;Name=PF00282;signature_desc=Pyridoxal-dependent decarboxylase conserved domain;Ontology_term=GO:0016831,GO:0030170,GO:0019752 LTnewLM_30 Pfam protein_match 892215 892874 . - . Parent=LTnewLM_300030200.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_30 AUGUSTUS gene 895930 897570 1 - . ID=LTnewLM_300030300 LTnewLM_30 AUGUSTUS mRNA 895930 897570 1 - . ID=LTnewLM_300030300.1;Parent=LTnewLM_300030300 LTnewLM_30 AUGUSTUS CDS 895930 897570 1 - 0 ID=LTnewLM_300030300.1:CDS:1;Parent=LTnewLM_300030300.1 ### LTnewLM_30 . polypeptide 895930 897570 . - . ID=LTnewLM_300030300.1:pep;Derives_from=LTnewLM_300030300.1;orthologous_to=LmjF.30.2360_mRNA;ortholog_cluster=OG0004264;product=term%3DRING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger)/zinc finger of C3HC4-type%2C RING/B-box zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13445|Pfam:PF00097|Pfam:PF13923|Pfam:PF15227|Pfam:PF00643;Ontology_term=GO:0005622,GO:0008270,GO:0046872 LTnewLM_30 Pfam protein_match 897049 897168 . - . Parent=LTnewLM_300030300.1:pep;Name=PF00643;signature_desc=B-box zinc finger;Ontology_term=GO:0008270,GO:0005622 LTnewLM_30 Pfam protein_match 897427 897549 . - . Parent=LTnewLM_300030300.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 897427 897549 . - . Parent=LTnewLM_300030300.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_30 Pfam protein_match 897427 897549 . - . Parent=LTnewLM_300030300.1:pep;Name=PF15227;signature_desc=zinc finger of C3HC4-type%2C RING LTnewLM_30 Pfam protein_match 897433 897549 . - . Parent=LTnewLM_300030300.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger ### LTnewLM_30 AUGUSTUS gene 898752 899291 1 - . ID=LTnewLM_300030400 LTnewLM_30 AUGUSTUS mRNA 898752 899291 1 - . ID=LTnewLM_300030400.1;Parent=LTnewLM_300030400 LTnewLM_30 AUGUSTUS CDS 898752 899291 1 - 0 ID=LTnewLM_300030400.1:CDS:1;Parent=LTnewLM_300030400.1 ### LTnewLM_30 . polypeptide 898752 899291 . - . ID=LTnewLM_300030400.1:pep;Derives_from=LTnewLM_300030400.1;orthologous_to=LmjF.30.2370_mRNA;ortholog_cluster=OG0004265;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF01926|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_30 Pfam protein_match 898770 899279 . - . Parent=LTnewLM_300030400.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_30 Pfam protein_match 898779 899246 . - . Parent=LTnewLM_300030400.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_30 Pfam protein_match 898866 899255 . - . Parent=LTnewLM_300030400.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_30 Pfam protein_match 898875 899246 . - . Parent=LTnewLM_300030400.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_30 Pfam protein_match 898911 899246 . - . Parent=LTnewLM_300030400.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_30 Pfam protein_match 898917 899246 . - . Parent=LTnewLM_300030400.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_30 AUGUSTUS gene 900463 901365 1 - . ID=LTnewLM_300030500 LTnewLM_30 AUGUSTUS mRNA 900463 901365 1 - . ID=LTnewLM_300030500.1;Parent=LTnewLM_300030500 LTnewLM_30 AUGUSTUS CDS 900463 901365 1 - 0 ID=LTnewLM_300030500.1:CDS:1;Parent=LTnewLM_300030500.1 ### LTnewLM_30 . polypeptide 900463 901365 . - . ID=LTnewLM_300030500.1:pep;Derives_from=LTnewLM_300030500.1;orthologous_to=LmjF.30.2380_mRNA;ortholog_cluster=OG0004266;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 902074 913446 1 - . ID=LTnewLM_300030600 LTnewLM_30 AUGUSTUS mRNA 902074 913446 1 - . ID=LTnewLM_300030600.1;Parent=LTnewLM_300030600 LTnewLM_30 AUGUSTUS CDS 902074 913446 1 - 0 ID=LTnewLM_300030600.1:CDS:1;Parent=LTnewLM_300030600.1 ### LTnewLM_30 . polypeptide 902074 913446 . - . ID=LTnewLM_300030600.1:pep;Derives_from=LTnewLM_300030600.1;orthologous_to=LmjF.30.2390_mRNA;ortholog_cluster=OG0004267;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 916474 917319 1 - . ID=LTnewLM_300030700 LTnewLM_30 AUGUSTUS mRNA 916474 917319 1 - . ID=LTnewLM_300030700.1;Parent=LTnewLM_300030700 LTnewLM_30 AUGUSTUS CDS 916474 917319 1 - 0 ID=LTnewLM_300030700.1:CDS:1;Parent=LTnewLM_300030700.1 ### LTnewLM_30 . polypeptide 916474 917319 . - . ID=LTnewLM_300030700.1:pep;Derives_from=LTnewLM_300030700.1;orthologous_to=LmjF.30.2400_mRNA;ortholog_cluster=OG0004268;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 918053 919330 1 - . ID=LTnewLM_300030800 LTnewLM_30 AUGUSTUS mRNA 918053 919330 1 - . ID=LTnewLM_300030800.1;Parent=LTnewLM_300030800 LTnewLM_30 AUGUSTUS CDS 918053 919330 1 - 0 ID=LTnewLM_300030800.1:CDS:1;Parent=LTnewLM_300030800.1 ### LTnewLM_30 . polypeptide 918053 919330 . - . ID=LTnewLM_300030800.1:pep;Derives_from=LTnewLM_300030800.1;orthologous_to=LmjF.30.2410_mRNA;ortholog_cluster=OG0004269;product=term%3DmRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16575 LTnewLM_30 Pfam protein_match 918374 918943 . - . Parent=LTnewLM_300030800.1:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop ### LTnewLM_30 Liftoff gene 920376 921203 . - . ID=LTnewLM_300030900;coverage=1.0;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2420_0 LTnewLM_30 Liftoff mRNA 920376 921203 . - . ID=LTnewLM_300030900.1;Parent=LTnewLM_300030900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 920376 921203 . - 0 ID=LTnewLM_300030900.1:CDS:1;Parent=LTnewLM_300030900.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 920376 921203 . - . ID=LTnewLM_300030900.1:pep;Derives_from=LTnewLM_300030900.1;orthologous_to=LmjF.30.2420_mRNA;ortholog_cluster=OG0004270;product=term%3DPeptidyl-tRNA hydrolase PTH2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01981;Ontology_term=GO:0004045 LTnewLM_30 Pfam protein_match 920385 920834 . - . Parent=LTnewLM_300030900.1:pep;Name=PF01981;signature_desc=Peptidyl-tRNA hydrolase PTH2;Ontology_term=GO:0004045 ### LTnewLM_30 AUGUSTUS gene 922324 925986 1 - . ID=LTnewLM_300031000 LTnewLM_30 AUGUSTUS mRNA 922324 925986 1 - . ID=LTnewLM_300031000.1;Parent=LTnewLM_300031000 LTnewLM_30 AUGUSTUS CDS 922324 925986 1 - 0 ID=LTnewLM_300031000.1:CDS:1;Parent=LTnewLM_300031000.1 ### LTnewLM_30 . polypeptide 922324 925986 . - . ID=LTnewLM_300031000.1:pep;Derives_from=LTnewLM_300031000.1;orthologous_to=LmjF.30.2430_mRNA;ortholog_cluster=OG0004271;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 930088 932766 . - . ID=LTnewLM_300031100;coverage=0.995;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.2440_0 LTnewLM_30 Liftoff mRNA 930088 932766 . - . ID=LTnewLM_300031100.1;Parent=LTnewLM_300031100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 930088 932766 . - 0 ID=LTnewLM_300031100.1:CDS:1;Parent=LTnewLM_300031100.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 930088 932766 . - . ID=LTnewLM_300031100.1:pep;Derives_from=LTnewLM_300031100.1;orthologous_to=LmjF.30.2440_mRNA;ortholog_cluster=OG0004272;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 935398 936408 1 - . ID=LTnewLM_300031200 LTnewLM_30 AUGUSTUS mRNA 935398 936408 1 - . ID=LTnewLM_300031200.1;Parent=LTnewLM_300031200 LTnewLM_30 AUGUSTUS CDS 935398 936408 1 - 0 ID=LTnewLM_300031200.1:CDS:1;Parent=LTnewLM_300031200.1 ### LTnewLM_30 . polypeptide 935398 936408 . - . ID=LTnewLM_300031200.1:pep;Derives_from=LTnewLM_300031200.1;orthologous_to=LmjF.30.2450_mRNA;ortholog_cluster=OG0004273;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_30 Pfam protein_match 936214 936366 . - . Parent=LTnewLM_300031200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_30 AUGUSTUS gene 937170 939079 0.66 - . ID=LTnewLM_300031300 LTnewLM_30 AUGUSTUS mRNA 937170 939079 0.66 - . ID=LTnewLM_300031300.1;Parent=LTnewLM_300031300 LTnewLM_30 AUGUSTUS CDS 937170 939014 0.66 - 0 ID=LTnewLM_300031300.1:CDS:1;Parent=LTnewLM_300031300.1 LTnewLM_30 AUGUSTUS CDS 939065 939079 0.92 - 0 ID=LTnewLM_300031300.1:CDS:2;Parent=LTnewLM_300031300.1 ### LTnewLM_30 . polypeptide 937170 939079 . - . ID=LTnewLM_300031300.1:pep;Derives_from=LTnewLM_300031300.1;orthologous_to=LTnewLM_300031400.1,LTnewLM_300031500.1,LTnewLM_300032300.1,LmjF.30.2460_mRNA,LmjF.30.2470_mRNA,LmjF.30.2480_mRNA,LmjF.30.2490_mRNA,LmjF.30.2550_mRNA;ortholog_cluster=OG0000020;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_30 Pfam protein_match 937259 939043 . - . Parent=LTnewLM_300031300.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_30 Pfam protein_match 937940 938656 . - . Parent=LTnewLM_300031300.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_30 . pseudogene 940704 942689 . - . ID=LTnewLM_300031400:pseudogene;coverage=0.996;sequence_ID=0.987;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2480_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 940704 942689 . - . ID=LTnewLM_300031400.1;Parent=LTnewLM_300031400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 940704 942689 . - . ID=LTnewLM_300031400.1:pseudogenic_exon:1;Parent=LTnewLM_300031400.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 940704 942689 . - . ID=LTnewLM_300031400.1:pep;Derives_from=LTnewLM_300031400.1;orthologous_to=LTnewLM_300031300.1,LTnewLM_300031500.1,LTnewLM_300032300.1,LmjF.30.2460_mRNA,LmjF.30.2470_mRNA,LmjF.30.2480_mRNA,LmjF.30.2490_mRNA,LmjF.30.2550_mRNA;ortholog_cluster=OG0000020;product=term%3DHsp70 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012 LTnewLM_30 Pfam protein_match 942333 942605 . - . Parent=LTnewLM_300031400.1:pep;Name=PF00012;signature_desc=Hsp70 protein ### LTnewLM_30 AUGUSTUS gene 946930 948915 1 - . ID=LTnewLM_300031500 LTnewLM_30 AUGUSTUS mRNA 946930 948915 1 - . ID=LTnewLM_300031500.1;Parent=LTnewLM_300031500 LTnewLM_30 AUGUSTUS CDS 946930 948915 1 - 0 ID=LTnewLM_300031500.1:CDS:1;Parent=LTnewLM_300031500.1 ### LTnewLM_30 . polypeptide 946930 948915 . - . ID=LTnewLM_300031500.1:pep;Derives_from=LTnewLM_300031500.1;orthologous_to=LTnewLM_300031300.1,LTnewLM_300031400.1,LTnewLM_300032300.1,LmjF.30.2460_mRNA,LmjF.30.2470_mRNA,LmjF.30.2480_mRNA,LmjF.30.2490_mRNA,LmjF.30.2550_mRNA;ortholog_cluster=OG0000020;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_30 Pfam protein_match 947047 948831 . - . Parent=LTnewLM_300031500.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_30 Pfam protein_match 947728 948444 . - . Parent=LTnewLM_300031500.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_30 AUGUSTUS gene 949941 950186 0.94 - . ID=LTnewLM_300031600 LTnewLM_30 AUGUSTUS mRNA 949941 950186 0.94 - . ID=LTnewLM_300031600.1;Parent=LTnewLM_300031600 LTnewLM_30 AUGUSTUS CDS 949941 950186 0.94 - 0 ID=LTnewLM_300031600.1:CDS:1;Parent=LTnewLM_300031600.1 ### LTnewLM_30 . polypeptide 949941 950186 . - . ID=LTnewLM_300031600.1:pep;Derives_from=LTnewLM_300031600.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 950427 950759 0.74 - . ID=LTnewLM_300031700 LTnewLM_30 AUGUSTUS mRNA 950427 950759 0.74 - . ID=LTnewLM_300031700.1;Parent=LTnewLM_300031700 LTnewLM_30 AUGUSTUS CDS 950427 950642 0.74 - 0 ID=LTnewLM_300031700.1:CDS:1;Parent=LTnewLM_300031700.1 LTnewLM_30 AUGUSTUS CDS 950694 950759 1 - 0 ID=LTnewLM_300031700.1:CDS:2;Parent=LTnewLM_300031700.1 ### LTnewLM_30 . polypeptide 950427 950759 . - . ID=LTnewLM_300031700.1:pep;Derives_from=LTnewLM_300031700.1;product=term%3DPyridoxal-dependent decarboxylase conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00282;Ontology_term=GO:0030170,GO:0019752,GO:0016831 LTnewLM_30 Pfam protein_match 950544 950708 . - . Parent=LTnewLM_300031700.1:pep;Name=PF00282;signature_desc=Pyridoxal-dependent decarboxylase conserved domain;Ontology_term=GO:0016831,GO:0030170,GO:0019752 ### LTnewLM_30 AUGUSTUS gene 950860 951087 0.59 - . ID=LTnewLM_300031800 LTnewLM_30 AUGUSTUS mRNA 950860 951087 0.59 - . ID=LTnewLM_300031800.1;Parent=LTnewLM_300031800 LTnewLM_30 AUGUSTUS CDS 950860 951087 0.59 - 0 ID=LTnewLM_300031800.1:CDS:1;Parent=LTnewLM_300031800.1 ### LTnewLM_30 . polypeptide 950860 951087 . - . ID=LTnewLM_300031800.1:pep;Derives_from=LTnewLM_300031800.1;product=term%3DPyridoxal-dependent decarboxylase conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00282;Ontology_term=GO:0030170,GO:0019752,GO:0016831 LTnewLM_30 Pfam protein_match 950887 951084 . - . Parent=LTnewLM_300031800.1:pep;Name=PF00282;signature_desc=Pyridoxal-dependent decarboxylase conserved domain;Ontology_term=GO:0016831,GO:0030170,GO:0019752 ### LTnewLM_30 AUGUSTUS gene 951162 951447 0.59 - . ID=LTnewLM_300031900 LTnewLM_30 AUGUSTUS mRNA 951162 951447 0.59 - . ID=LTnewLM_300031900.1;Parent=LTnewLM_300031900 LTnewLM_30 AUGUSTUS CDS 951162 951393 0.59 - 1 ID=LTnewLM_300031900.1:CDS:1;Parent=LTnewLM_300031900.1 LTnewLM_30 AUGUSTUS CDS 951437 951447 0.59 - 0 ID=LTnewLM_300031900.1:CDS:2;Parent=LTnewLM_300031900.1 ### LTnewLM_30 . polypeptide 951162 951447 . - . ID=LTnewLM_300031900.1:pep;Derives_from=LTnewLM_300031900.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 952711 953760 1 - . ID=LTnewLM_300032000 LTnewLM_30 AUGUSTUS mRNA 952711 953760 1 - . ID=LTnewLM_300032000.1;Parent=LTnewLM_300032000 LTnewLM_30 AUGUSTUS CDS 952711 953760 1 - 0 ID=LTnewLM_300032000.1:CDS:1;Parent=LTnewLM_300032000.1 ### LTnewLM_30 . polypeptide 952711 953760 . - . ID=LTnewLM_300032000.1:pep;Derives_from=LTnewLM_300032000.1;orthologous_to=LmjF.30.2520_mRNA;ortholog_cluster=OG0004274;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 954272 954880 1 - . ID=LTnewLM_300032100 LTnewLM_30 AUGUSTUS mRNA 954272 954880 1 - . ID=LTnewLM_300032100.1;Parent=LTnewLM_300032100 LTnewLM_30 AUGUSTUS CDS 954272 954880 1 - 0 ID=LTnewLM_300032100.1:CDS:1;Parent=LTnewLM_300032100.1 ### LTnewLM_30 . polypeptide 954272 954880 . - . ID=LTnewLM_300032100.1:pep;Derives_from=LTnewLM_300032100.1;orthologous_to=LmjF.30.2530_mRNA;ortholog_cluster=OG0004275;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 955692 958526 1 - . ID=LTnewLM_300032200 LTnewLM_30 AUGUSTUS mRNA 955692 958526 1 - . ID=LTnewLM_300032200.1;Parent=LTnewLM_300032200 LTnewLM_30 AUGUSTUS CDS 955692 958526 1 - 0 ID=LTnewLM_300032200.1:CDS:1;Parent=LTnewLM_300032200.1 ### LTnewLM_30 . polypeptide 955692 958526 . - . ID=LTnewLM_300032200.1:pep;Derives_from=LTnewLM_300032200.1;orthologous_to=LmjF.30.2540_mRNA;ortholog_cluster=OG0004276;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862;Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 955797 955916 . - . Parent=LTnewLM_300032200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_30 Pfam protein_match 955998 956393 . - . Parent=LTnewLM_300032200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_30 AUGUSTUS gene 960708 962672 1 - . ID=LTnewLM_300032300 LTnewLM_30 AUGUSTUS mRNA 960708 962672 1 - . ID=LTnewLM_300032300.1;Parent=LTnewLM_300032300 LTnewLM_30 AUGUSTUS CDS 960708 962672 1 - 0 ID=LTnewLM_300032300.1:CDS:1;Parent=LTnewLM_300032300.1 ### LTnewLM_30 . polypeptide 960708 962672 . - . ID=LTnewLM_300032300.1:pep;Derives_from=LTnewLM_300032300.1;orthologous_to=LTnewLM_300031300.1,LTnewLM_300031400.1,LTnewLM_300031500.1,LmjF.30.2460_mRNA,LmjF.30.2470_mRNA,LmjF.30.2480_mRNA,LmjF.30.2490_mRNA,LmjF.30.2550_mRNA;ortholog_cluster=OG0000020;product=term%3DHsp70 protein/MreB/Mbl protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012|Pfam:PF06723;Ontology_term=GO:0000902 LTnewLM_30 Pfam protein_match 960804 962588 . - . Parent=LTnewLM_300032300.1:pep;Name=PF00012;signature_desc=Hsp70 protein LTnewLM_30 Pfam protein_match 961485 962201 . - . Parent=LTnewLM_300032300.1:pep;Name=PF06723;signature_desc=MreB/Mbl protein;Ontology_term=GO:0000902 ### LTnewLM_30 . pseudogene 967045 970330 . - . ID=LTnewLM_300032400:pseudogene;coverage=0.995;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2560_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 967045 970330 . - . ID=LTnewLM_300032400.1;Parent=LTnewLM_300032400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 967045 970330 . - . ID=LTnewLM_300032400.1:pseudogenic_exon:1;Parent=LTnewLM_300032400.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 967045 970330 . - . ID=LTnewLM_300032400.1:pep;Derives_from=LTnewLM_300032400.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 976265 976590 0.85 - . ID=LTnewLM_300032500 LTnewLM_30 AUGUSTUS mRNA 976265 976590 0.85 - . ID=LTnewLM_300032500.1;Parent=LTnewLM_300032500 LTnewLM_30 AUGUSTUS CDS 976265 976368 1 - 2 ID=LTnewLM_300032500.1:CDS:1;Parent=LTnewLM_300032500.1 LTnewLM_30 AUGUSTUS CDS 976419 976590 0.85 - 0 ID=LTnewLM_300032500.1:CDS:2;Parent=LTnewLM_300032500.1 ### LTnewLM_30 . polypeptide 976265 976590 . - . ID=LTnewLM_300032500.1:pep;Derives_from=LTnewLM_300032500.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 979231 980457 1 - . ID=LTnewLM_300032600 LTnewLM_30 AUGUSTUS mRNA 979231 980457 1 - . ID=LTnewLM_300032600.1;Parent=LTnewLM_300032600 LTnewLM_30 AUGUSTUS CDS 979231 980457 1 - 0 ID=LTnewLM_300032600.1:CDS:1;Parent=LTnewLM_300032600.1 ### LTnewLM_30 . polypeptide 979231 980457 . - . ID=LTnewLM_300032600.1:pep;Derives_from=LTnewLM_300032600.1;orthologous_to=LmjF.30.2570_mRNA;ortholog_cluster=OG0004277;product=term%3DCofilin/tropomyosin-type actin-binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00241;Ontology_term=GO:0005622,GO:0003779 LTnewLM_30 Pfam protein_match 979567 979905 . - . Parent=LTnewLM_300032600.1:pep;Name=PF00241;signature_desc=Cofilin/tropomyosin-type actin-binding protein;Ontology_term=GO:0003779,GO:0005622 ### LTnewLM_30 AUGUSTUS gene 986542 987135 1 - . ID=LTnewLM_300032700 LTnewLM_30 AUGUSTUS mRNA 986542 987135 1 - . ID=LTnewLM_300032700.1;Parent=LTnewLM_300032700 LTnewLM_30 AUGUSTUS CDS 986542 987135 1 - 0 ID=LTnewLM_300032700.1:CDS:1;Parent=LTnewLM_300032700.1 ### LTnewLM_30 . polypeptide 986542 987135 . - . ID=LTnewLM_300032700.1:pep;Derives_from=LTnewLM_300032700.1;orthologous_to=LmjF.30.2580_mRNA;ortholog_cluster=OG0004278;product=term%3DReticulon%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02453 LTnewLM_30 Pfam protein_match 986650 987096 . - . Parent=LTnewLM_300032700.1:pep;Name=PF02453;signature_desc=Reticulon ### LTnewLM_30 AUGUSTUS gene 988168 989649 1 - . ID=LTnewLM_300032800 LTnewLM_30 AUGUSTUS mRNA 988168 989649 1 - . ID=LTnewLM_300032800.1;Parent=LTnewLM_300032800 LTnewLM_30 AUGUSTUS CDS 988168 989649 1 - 0 ID=LTnewLM_300032800.1:CDS:1;Parent=LTnewLM_300032800.1 ### LTnewLM_30 . polypeptide 988168 989649 . - . ID=LTnewLM_300032800.1:pep;Derives_from=LTnewLM_300032800.1;orthologous_to=LmjF.30.2590_mRNA;ortholog_cluster=OG0004279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 992101 993969 1 - . ID=LTnewLM_300032900 LTnewLM_30 AUGUSTUS mRNA 992101 993969 1 - . ID=LTnewLM_300032900.1;Parent=LTnewLM_300032900 LTnewLM_30 AUGUSTUS CDS 992101 993969 1 - 0 ID=LTnewLM_300032900.1:CDS:1;Parent=LTnewLM_300032900.1 ### LTnewLM_30 . polypeptide 992101 993969 . - . ID=LTnewLM_300032900.1:pep;Derives_from=LTnewLM_300032900.1;orthologous_to=LmjF.30.2600_mRNA;ortholog_cluster=OG0004280;product=term%3DFormate--tetrahydrofolate ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01268;Ontology_term=GO:0004329,GO:0009396,GO:0005524 LTnewLM_30 Pfam protein_match 992107 993930 . - . Parent=LTnewLM_300032900.1:pep;Name=PF01268;signature_desc=Formate--tetrahydrofolate ligase;Ontology_term=GO:0004329,GO:0005524,GO:0009396 ### LTnewLM_30 AUGUSTUS gene 995341 995991 1 - . ID=LTnewLM_300033000 LTnewLM_30 AUGUSTUS mRNA 995341 995991 1 - . ID=LTnewLM_300033000.1;Parent=LTnewLM_300033000 LTnewLM_30 AUGUSTUS CDS 995341 995991 1 - 0 ID=LTnewLM_300033000.1:CDS:1;Parent=LTnewLM_300033000.1 ### LTnewLM_30 . polypeptide 995341 995991 . - . ID=LTnewLM_300033000.1:pep;Derives_from=LTnewLM_300033000.1;orthologous_to=LmjF.30.2610_mRNA;ortholog_cluster=OG0004281;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 995557 995760 . - . Parent=LTnewLM_300033000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 997477 999636 1 - . ID=LTnewLM_300033100 LTnewLM_30 AUGUSTUS mRNA 997477 999636 1 - . ID=LTnewLM_300033100.1;Parent=LTnewLM_300033100 LTnewLM_30 AUGUSTUS CDS 997477 999636 1 - 0 ID=LTnewLM_300033100.1:CDS:1;Parent=LTnewLM_300033100.1 ### LTnewLM_30 . polypeptide 997477 999636 . - . ID=LTnewLM_300033100.1:pep;Derives_from=LTnewLM_300033100.1;orthologous_to=LmjF.30.2620_mRNA;ortholog_cluster=OG0004282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1000220 1001284 1 - . ID=LTnewLM_300033200 LTnewLM_30 AUGUSTUS mRNA 1000220 1001284 1 - . ID=LTnewLM_300033200.1;Parent=LTnewLM_300033200 LTnewLM_30 AUGUSTUS CDS 1000220 1001284 1 - 0 ID=LTnewLM_300033200.1:CDS:1;Parent=LTnewLM_300033200.1 ### LTnewLM_30 . polypeptide 1000220 1001284 . - . ID=LTnewLM_300033200.1:pep;Derives_from=LTnewLM_300033200.1;orthologous_to=LmjF.30.2630_mRNA;ortholog_cluster=OG0004283;product=term%3DDNA polymerase III%2C delta subunit/ATPase family associated with various cellular activities (AAA)/Replication factor C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13177|Pfam:PF00004|Pfam:PF08542;Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 1000247 1000495 . - . Parent=LTnewLM_300033200.1:pep;Name=PF08542;signature_desc=Replication factor C C-terminal domain LTnewLM_30 Pfam protein_match 1000697 1001161 . - . Parent=LTnewLM_300033200.1:pep;Name=PF13177;signature_desc=DNA polymerase III%2C delta subunit LTnewLM_30 Pfam protein_match 1000706 1001098 . - . Parent=LTnewLM_300033200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_30 AUGUSTUS gene 1002072 1004567 1 - . ID=LTnewLM_300033300 LTnewLM_30 AUGUSTUS mRNA 1002072 1004567 1 - . ID=LTnewLM_300033300.1;Parent=LTnewLM_300033300 LTnewLM_30 AUGUSTUS CDS 1002072 1004567 1 - 0 ID=LTnewLM_300033300.1:CDS:1;Parent=LTnewLM_300033300.1 ### LTnewLM_30 . polypeptide 1002072 1004567 . - . ID=LTnewLM_300033300.1:pep;Derives_from=LTnewLM_300033300.1;orthologous_to=LmjF.30.2640_mRNA;ortholog_cluster=OG0004284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1005921 1006262 1 - . ID=LTnewLM_300033400 LTnewLM_30 AUGUSTUS mRNA 1005921 1006262 1 - . ID=LTnewLM_300033400.1;Parent=LTnewLM_300033400 LTnewLM_30 AUGUSTUS CDS 1005921 1006262 1 - 0 ID=LTnewLM_300033400.1:CDS:1;Parent=LTnewLM_300033400.1 ### LTnewLM_30 . polypeptide 1005921 1006262 . - . ID=LTnewLM_300033400.1:pep;Derives_from=LTnewLM_300033400.1;orthologous_to=LmjF.30.2645_mRNA;ortholog_cluster=OG0004285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1007133 1007603 1 - . ID=LTnewLM_300033500 LTnewLM_30 AUGUSTUS mRNA 1007133 1007603 1 - . ID=LTnewLM_300033500.1;Parent=LTnewLM_300033500 LTnewLM_30 AUGUSTUS CDS 1007133 1007603 1 - 0 ID=LTnewLM_300033500.1:CDS:1;Parent=LTnewLM_300033500.1 ### LTnewLM_30 . polypeptide 1007133 1007603 . - . ID=LTnewLM_300033500.1:pep;Derives_from=LTnewLM_300033500.1;orthologous_to=LmjF.30.2650_mRNA;ortholog_cluster=OG0004286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1008531 1009796 1 - . ID=LTnewLM_300033600 LTnewLM_30 AUGUSTUS mRNA 1008531 1009796 1 - . ID=LTnewLM_300033600.1;Parent=LTnewLM_300033600 LTnewLM_30 AUGUSTUS CDS 1008531 1009796 1 - 0 ID=LTnewLM_300033600.1:CDS:1;Parent=LTnewLM_300033600.1 ### LTnewLM_30 . polypeptide 1008531 1009796 . - . ID=LTnewLM_300033600.1:pep;Derives_from=LTnewLM_300033600.1;orthologous_to=LmjF.30.2660_mRNA;ortholog_cluster=OG0004287;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1010455 1011561 1 - . ID=LTnewLM_300033700 LTnewLM_30 AUGUSTUS mRNA 1010455 1011561 1 - . ID=LTnewLM_300033700.1;Parent=LTnewLM_300033700 LTnewLM_30 AUGUSTUS CDS 1010455 1011561 1 - 0 ID=LTnewLM_300033700.1:CDS:1;Parent=LTnewLM_300033700.1 ### LTnewLM_30 . polypeptide 1010455 1011561 . - . ID=LTnewLM_300033700.1:pep;Derives_from=LTnewLM_300033700.1;orthologous_to=LmjF.30.2670_mRNA;ortholog_cluster=OG0004288;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1012320 1013297 1 - . ID=LTnewLM_300033800 LTnewLM_30 AUGUSTUS mRNA 1012320 1013297 1 - . ID=LTnewLM_300033800.1;Parent=LTnewLM_300033800 LTnewLM_30 AUGUSTUS CDS 1012320 1013297 1 - 0 ID=LTnewLM_300033800.1:CDS:1;Parent=LTnewLM_300033800.1 ### LTnewLM_30 . polypeptide 1012320 1013297 . - . ID=LTnewLM_300033800.1:pep;Derives_from=LTnewLM_300033800.1;orthologous_to=LmjF.30.2680_mRNA;ortholog_cluster=OG0004289;product=term%3DTriose-phosphate Transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03151 LTnewLM_30 Pfam protein_match 1012437 1013255 . - . Parent=LTnewLM_300033800.1:pep;Name=PF03151;signature_desc=Triose-phosphate Transporter family ### LTnewLM_30 AUGUSTUS gene 1016156 1017040 1 - . ID=LTnewLM_300033900 LTnewLM_30 AUGUSTUS mRNA 1016156 1017040 1 - . ID=LTnewLM_300033900.1;Parent=LTnewLM_300033900 LTnewLM_30 AUGUSTUS CDS 1016156 1017040 1 - 0 ID=LTnewLM_300033900.1:CDS:1;Parent=LTnewLM_300033900.1 ### LTnewLM_30 . polypeptide 1016156 1017040 . - . ID=LTnewLM_300033900.1:pep;Derives_from=LTnewLM_300033900.1;orthologous_to=LmjF.30.2690_mRNA;ortholog_cluster=OG0004290;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1018689 1019861 1 - . ID=LTnewLM_300034000 LTnewLM_30 AUGUSTUS mRNA 1018689 1019861 1 - . ID=LTnewLM_300034000.1;Parent=LTnewLM_300034000 LTnewLM_30 AUGUSTUS CDS 1018689 1019861 1 - 0 ID=LTnewLM_300034000.1:CDS:1;Parent=LTnewLM_300034000.1 ### LTnewLM_30 . polypeptide 1018689 1019861 . - . ID=LTnewLM_300034000.1:pep;Derives_from=LTnewLM_300034000.1;orthologous_to=LmjF.30.2700_mRNA;ortholog_cluster=OG0004291;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1021104 1023902 1 - . ID=LTnewLM_300034100 LTnewLM_30 AUGUSTUS mRNA 1021104 1023902 1 - . ID=LTnewLM_300034100.1;Parent=LTnewLM_300034100 LTnewLM_30 AUGUSTUS CDS 1021104 1023902 1 - 0 ID=LTnewLM_300034100.1:CDS:1;Parent=LTnewLM_300034100.1 ### LTnewLM_30 . polypeptide 1021104 1023902 . - . ID=LTnewLM_300034100.1:pep;Derives_from=LTnewLM_300034100.1;orthologous_to=LmjF.30.2710_mRNA;ortholog_cluster=OG0004292;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1026102 1028294 1 - . ID=LTnewLM_300034200 LTnewLM_30 AUGUSTUS mRNA 1026102 1028294 1 - . ID=LTnewLM_300034200.1;Parent=LTnewLM_300034200 LTnewLM_30 AUGUSTUS CDS 1026102 1028294 1 - 0 ID=LTnewLM_300034200.1:CDS:1;Parent=LTnewLM_300034200.1 ### LTnewLM_30 . polypeptide 1026102 1028294 . - . ID=LTnewLM_300034200.1:pep;Derives_from=LTnewLM_300034200.1;orthologous_to=LmjF.30.2720_mRNA;ortholog_cluster=OG0004293;product=term%3DGRAM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02893 LTnewLM_30 Pfam protein_match 1026114 1026422 . - . Parent=LTnewLM_300034200.1:pep;Name=PF02893;signature_desc=GRAM domain ### LTnewLM_30 AUGUSTUS gene 1031098 1033929 1 - . ID=LTnewLM_300034300 LTnewLM_30 AUGUSTUS mRNA 1031098 1033929 1 - . ID=LTnewLM_300034300.1;Parent=LTnewLM_300034300 LTnewLM_30 AUGUSTUS CDS 1031098 1033929 1 - 0 ID=LTnewLM_300034300.1:CDS:1;Parent=LTnewLM_300034300.1 ### LTnewLM_30 . polypeptide 1031098 1033929 . - . ID=LTnewLM_300034300.1:pep;Derives_from=LTnewLM_300034300.1;orthologous_to=LmjF.30.2730_mRNA;ortholog_cluster=OG0004294;product=term%3DDocking domain of Afi1 for Arf3 in vesicle trafficking/Stabilization of polarity axis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07792|Pfam:PF08616 LTnewLM_30 Pfam protein_match 1031839 1032168 . - . Parent=LTnewLM_300034300.1:pep;Name=PF08616;signature_desc=Stabilization of polarity axis LTnewLM_30 Pfam protein_match 1033669 1033878 . - . Parent=LTnewLM_300034300.1:pep;Name=PF07792;signature_desc=Docking domain of Afi1 for Arf3 in vesicle trafficking ### LTnewLM_30 AUGUSTUS gene 1035293 1036519 1 - . ID=LTnewLM_300034400 LTnewLM_30 AUGUSTUS mRNA 1035293 1036519 1 - . ID=LTnewLM_300034400.1;Parent=LTnewLM_300034400 LTnewLM_30 AUGUSTUS CDS 1035293 1036519 1 - 0 ID=LTnewLM_300034400.1:CDS:1;Parent=LTnewLM_300034400.1 ### LTnewLM_30 . polypeptide 1035293 1036519 . - . ID=LTnewLM_300034400.1:pep;Derives_from=LTnewLM_300034400.1;orthologous_to=LmjF.30.2740_mRNA;ortholog_cluster=OG0004295;product=term%3DTetratricopeptide repeat/TPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00515|Pfam:PF07719|Pfam:PF13181|Pfam:PF13432|Pfam:PF13414;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1035827 1035922 . - . Parent=LTnewLM_300034400.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1035827 1035922 . - . Parent=LTnewLM_300034400.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1035827 1035922 . - . Parent=LTnewLM_300034400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1035932 1036012 . - . Parent=LTnewLM_300034400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1035935 1036114 . - . Parent=LTnewLM_300034400.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1035998 1036108 . - . Parent=LTnewLM_300034400.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_30 Pfam protein_match 1036031 1036114 . - . Parent=LTnewLM_300034400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1036031 1036117 . - . Parent=LTnewLM_300034400.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1036031 1036117 . - . Parent=LTnewLM_300034400.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat ### LTnewLM_30 AUGUSTUS gene 1037293 1037997 1 - . ID=LTnewLM_300034500 LTnewLM_30 AUGUSTUS mRNA 1037293 1037997 1 - . ID=LTnewLM_300034500.1;Parent=LTnewLM_300034500 LTnewLM_30 AUGUSTUS CDS 1037293 1037997 1 - 0 ID=LTnewLM_300034500.1:CDS:1;Parent=LTnewLM_300034500.1 ### LTnewLM_30 . polypeptide 1037293 1037997 . - . ID=LTnewLM_300034500.1:pep;Derives_from=LTnewLM_300034500.1;orthologous_to=LmjF.30.2750_mRNA;ortholog_cluster=OG0004296;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 Liftoff gene 1038967 1039116 . - . ID=LTnewLM_300034600;coverage=1.0;sequence_ID=0.973;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.2760_0 LTnewLM_30 Liftoff mRNA 1038967 1039116 . - . ID=LTnewLM_300034600.1;Parent=LTnewLM_300034600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1038967 1039116 . - 0 ID=LTnewLM_300034600.1:CDS:1;Parent=LTnewLM_300034600.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1038967 1039116 . - . ID=LTnewLM_300034600.1:pep;Derives_from=LTnewLM_300034600.1;orthologous_to=LmjF.30.2760_mRNA;ortholog_cluster=OG0004297;product=term%3DTranslation machinery associated TMA7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09072 LTnewLM_30 Pfam protein_match 1038973 1039110 . - . Parent=LTnewLM_300034600.1:pep;Name=PF09072;signature_desc=Translation machinery associated TMA7 ### LTnewLM_30 AUGUSTUS gene 1040910 1041239 1 - . ID=LTnewLM_300034700 LTnewLM_30 AUGUSTUS mRNA 1040910 1041239 1 - . ID=LTnewLM_300034700.1;Parent=LTnewLM_300034700 LTnewLM_30 AUGUSTUS CDS 1040910 1041239 1 - 0 ID=LTnewLM_300034700.1:CDS:1;Parent=LTnewLM_300034700.1 ### LTnewLM_30 . polypeptide 1040910 1041239 . - . ID=LTnewLM_300034700.1:pep;Derives_from=LTnewLM_300034700.1;orthologous_to=LmjF.30.2765_mRNA;ortholog_cluster=OG0004298;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1042136 1042942 1 - . ID=LTnewLM_300034800 LTnewLM_30 AUGUSTUS mRNA 1042136 1042942 1 - . ID=LTnewLM_300034800.1;Parent=LTnewLM_300034800 LTnewLM_30 AUGUSTUS CDS 1042136 1042942 1 - 0 ID=LTnewLM_300034800.1:CDS:1;Parent=LTnewLM_300034800.1 ### LTnewLM_30 . polypeptide 1042136 1042942 . - . ID=LTnewLM_300034800.1:pep;Derives_from=LTnewLM_300034800.1;orthologous_to=LmjF.30.2770_mRNA;ortholog_cluster=OG0004299;product=term%3DIron/manganese superoxide dismutases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02777;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784 LTnewLM_30 Pfam protein_match 1042169 1042453 . - . Parent=LTnewLM_300034800.1:pep;Name=PF02777;signature_desc=Iron/manganese superoxide dismutases%2C C-terminal domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 1044763 1045779 1 - . ID=LTnewLM_300034900 LTnewLM_30 AUGUSTUS mRNA 1044763 1045779 1 - . ID=LTnewLM_300034900.1;Parent=LTnewLM_300034900 LTnewLM_30 AUGUSTUS CDS 1044763 1045779 1 - 0 ID=LTnewLM_300034900.1:CDS:1;Parent=LTnewLM_300034900.1 ### LTnewLM_30 . polypeptide 1044763 1045779 . - . ID=LTnewLM_300034900.1:pep;Derives_from=LTnewLM_300034900.1;orthologous_to=LmjF.30.2780_mRNA;ortholog_cluster=OG0004300;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 1044823 1044885 . - . Parent=LTnewLM_300034900.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_30 AUGUSTUS gene 1046719 1047282 1 - . ID=LTnewLM_300035000 LTnewLM_30 AUGUSTUS mRNA 1046719 1047282 1 - . ID=LTnewLM_300035000.1;Parent=LTnewLM_300035000 LTnewLM_30 AUGUSTUS CDS 1046719 1047282 1 - 0 ID=LTnewLM_300035000.1:CDS:1;Parent=LTnewLM_300035000.1 ### LTnewLM_30 . polypeptide 1046719 1047282 . - . ID=LTnewLM_300035000.1:pep;Derives_from=LTnewLM_300035000.1;orthologous_to=LmjF.30.2790_mRNA;ortholog_cluster=OG0004301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1048847 1049671 1 - . ID=LTnewLM_300035100 LTnewLM_30 AUGUSTUS mRNA 1048847 1049671 1 - . ID=LTnewLM_300035100.1;Parent=LTnewLM_300035100 LTnewLM_30 AUGUSTUS CDS 1048847 1049671 1 - 0 ID=LTnewLM_300035100.1:CDS:1;Parent=LTnewLM_300035100.1 ### LTnewLM_30 . polypeptide 1048847 1049671 . - . ID=LTnewLM_300035100.1:pep;Derives_from=LTnewLM_300035100.1;orthologous_to=LmjF.30.2800_mRNA;ortholog_cluster=OG0004302;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1050605 1051222 1 - . ID=LTnewLM_300035200 LTnewLM_30 AUGUSTUS mRNA 1050605 1051222 1 - . ID=LTnewLM_300035200.1;Parent=LTnewLM_300035200 LTnewLM_30 AUGUSTUS CDS 1050605 1051222 1 - 0 ID=LTnewLM_300035200.1:CDS:1;Parent=LTnewLM_300035200.1 ### LTnewLM_30 . polypeptide 1050605 1051222 . - . ID=LTnewLM_300035200.1:pep;Derives_from=LTnewLM_300035200.1;orthologous_to=LmjF.30.2810_mRNA;ortholog_cluster=OG0004303;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1052182 1053798 1 - . ID=LTnewLM_300035300 LTnewLM_30 AUGUSTUS mRNA 1052182 1053798 1 - . ID=LTnewLM_300035300.1;Parent=LTnewLM_300035300 LTnewLM_30 AUGUSTUS CDS 1052182 1053798 1 - 0 ID=LTnewLM_300035300.1:CDS:1;Parent=LTnewLM_300035300.1 ### LTnewLM_30 . polypeptide 1052182 1053798 . - . ID=LTnewLM_300035300.1:pep;Derives_from=LTnewLM_300035300.1;orthologous_to=LmjF.30.2820_mRNA;ortholog_cluster=OG0004304;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 1052230 1053708 . - . Parent=LTnewLM_300035300.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_30 AUGUSTUS gene 1054980 1057376 1 - . ID=LTnewLM_300035400 LTnewLM_30 AUGUSTUS mRNA 1054980 1057376 1 - . ID=LTnewLM_300035400.1;Parent=LTnewLM_300035400 LTnewLM_30 AUGUSTUS CDS 1054980 1057376 1 - 0 ID=LTnewLM_300035400.1:CDS:1;Parent=LTnewLM_300035400.1 ### LTnewLM_30 . polypeptide 1054980 1057376 . - . ID=LTnewLM_300035400.1:pep;Derives_from=LTnewLM_300035400.1;orthologous_to=LmjF.30.2830_mRNA;ortholog_cluster=OG0004305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1058026 1059117 1 - . ID=LTnewLM_300035500 LTnewLM_30 AUGUSTUS mRNA 1058026 1059117 1 - . ID=LTnewLM_300035500.1;Parent=LTnewLM_300035500 LTnewLM_30 AUGUSTUS CDS 1058026 1059117 1 - 0 ID=LTnewLM_300035500.1:CDS:1;Parent=LTnewLM_300035500.1 ### LTnewLM_30 . polypeptide 1058026 1059117 . - . ID=LTnewLM_300035500.1:pep;Derives_from=LTnewLM_300035500.1;orthologous_to=LmjF.30.2840_mRNA;ortholog_cluster=OG0004306;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_30 Pfam protein_match 1058263 1059030 . - . Parent=LTnewLM_300035500.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_30 AUGUSTUS gene 1059954 1060268 1 - . ID=LTnewLM_300035600 LTnewLM_30 AUGUSTUS mRNA 1059954 1060268 1 - . ID=LTnewLM_300035600.1;Parent=LTnewLM_300035600 LTnewLM_30 AUGUSTUS CDS 1059954 1060268 1 - 0 ID=LTnewLM_300035600.1:CDS:1;Parent=LTnewLM_300035600.1 ### LTnewLM_30 . polypeptide 1059954 1060268 . - . ID=LTnewLM_300035600.1:pep;Derives_from=LTnewLM_300035600.1;orthologous_to=LmjF.30.2845_mRNA;ortholog_cluster=OG0004307;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1060832 1061179 1 - . ID=LTnewLM_300035700 LTnewLM_30 AUGUSTUS mRNA 1060832 1061179 1 - . ID=LTnewLM_300035700.1;Parent=LTnewLM_300035700 LTnewLM_30 AUGUSTUS CDS 1060832 1061179 1 - 0 ID=LTnewLM_300035700.1:CDS:1;Parent=LTnewLM_300035700.1 ### LTnewLM_30 . polypeptide 1060832 1061179 . - . ID=LTnewLM_300035700.1:pep;Derives_from=LTnewLM_300035700.1;orthologous_to=LmjF.30.2850_mRNA;ortholog_cluster=OG0004308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1064876 1065184 0.59 - . ID=LTnewLM_300035800 LTnewLM_30 AUGUSTUS mRNA 1064876 1065184 0.59 - . ID=LTnewLM_300035800.1;Parent=LTnewLM_300035800 LTnewLM_30 AUGUSTUS CDS 1064876 1064960 0.59 - 1 ID=LTnewLM_300035800.1:CDS:1;Parent=LTnewLM_300035800.1 LTnewLM_30 AUGUSTUS CDS 1065018 1065184 1 - 0 ID=LTnewLM_300035800.1:CDS:2;Parent=LTnewLM_300035800.1 ### LTnewLM_30 . polypeptide 1064876 1065184 . - . ID=LTnewLM_300035800.1:pep;Derives_from=LTnewLM_300035800.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1065468 1066145 0.61 - . ID=LTnewLM_300035900 LTnewLM_30 AUGUSTUS mRNA 1065468 1066145 0.61 - . ID=LTnewLM_300035900.1;Parent=LTnewLM_300035900 LTnewLM_30 AUGUSTUS CDS 1065468 1065769 0.79 - 2 ID=LTnewLM_300035900.1:CDS:1;Parent=LTnewLM_300035900.1 LTnewLM_30 AUGUSTUS CDS 1065878 1066145 0.68 - 0 ID=LTnewLM_300035900.1:CDS:2;Parent=LTnewLM_300035900.1 ### LTnewLM_30 . polypeptide 1065468 1066145 . - . ID=LTnewLM_300035900.1:pep;Derives_from=LTnewLM_300035900.1;orthologous_to=LTnewLM_230023600.1,LTnewLM_290029200.1,LTnewLM_330026600.1,LTnewLM_330027000.1,LTnewLM_350026400.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1067417 1068571 1 - . ID=LTnewLM_300036000 LTnewLM_30 AUGUSTUS mRNA 1067417 1068571 1 - . ID=LTnewLM_300036000.1;Parent=LTnewLM_300036000 LTnewLM_30 AUGUSTUS CDS 1067417 1068571 1 - 0 ID=LTnewLM_300036000.1:CDS:1;Parent=LTnewLM_300036000.1 ### LTnewLM_30 . polypeptide 1067417 1068571 . - . ID=LTnewLM_300036000.1:pep;Derives_from=LTnewLM_300036000.1;orthologous_to=LmjF.30.2860_mRNA;ortholog_cluster=OG0004309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1069369 1070781 1 - . ID=LTnewLM_300036100 LTnewLM_30 AUGUSTUS mRNA 1069369 1070781 1 - . ID=LTnewLM_300036100.1;Parent=LTnewLM_300036100 LTnewLM_30 AUGUSTUS CDS 1069369 1070781 1 - 0 ID=LTnewLM_300036100.1:CDS:1;Parent=LTnewLM_300036100.1 ### LTnewLM_30 . polypeptide 1069369 1070781 . - . ID=LTnewLM_300036100.1:pep;Derives_from=LTnewLM_300036100.1;orthologous_to=LmjF.30.2870_mRNA;ortholog_cluster=OG0004310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1072525 1074546 1 - . ID=LTnewLM_300036200 LTnewLM_30 AUGUSTUS mRNA 1072525 1074546 1 - . ID=LTnewLM_300036200.1;Parent=LTnewLM_300036200 LTnewLM_30 AUGUSTUS CDS 1072525 1074546 1 - 0 ID=LTnewLM_300036200.1:CDS:1;Parent=LTnewLM_300036200.1 ### LTnewLM_30 . polypeptide 1072525 1074546 . - . ID=LTnewLM_300036200.1:pep;Derives_from=LTnewLM_300036200.1;orthologous_to=LmjF.30.2880_mRNA;ortholog_cluster=OG0004311;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1075260 1076633 1 - . ID=LTnewLM_300036300 LTnewLM_30 AUGUSTUS mRNA 1075260 1076633 1 - . ID=LTnewLM_300036300.1;Parent=LTnewLM_300036300 LTnewLM_30 AUGUSTUS CDS 1075260 1076633 1 - 0 ID=LTnewLM_300036300.1:CDS:1;Parent=LTnewLM_300036300.1 ### LTnewLM_30 . polypeptide 1075260 1076633 . - . ID=LTnewLM_300036300.1:pep;Derives_from=LTnewLM_300036300.1;orthologous_to=LmjF.30.2890_mRNA;ortholog_cluster=OG0004312;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1078213 1079970 1 - . ID=LTnewLM_300036400 LTnewLM_30 AUGUSTUS mRNA 1078213 1079970 1 - . ID=LTnewLM_300036400.1;Parent=LTnewLM_300036400 LTnewLM_30 AUGUSTUS CDS 1078213 1079970 1 - 0 ID=LTnewLM_300036400.1:CDS:1;Parent=LTnewLM_300036400.1 ### LTnewLM_30 . polypeptide 1078213 1079970 . - . ID=LTnewLM_300036400.1:pep;Derives_from=LTnewLM_300036400.1;orthologous_to=LmjF.30.2900_mRNA;ortholog_cluster=OG0004313;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_30 Pfam protein_match 1078432 1079781 . - . Parent=LTnewLM_300036400.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_30 . pseudogene 1081926 1083089 . - . ID=LTnewLM_300036500:pseudogene;coverage=1.0;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.2910_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 1081926 1083089 . - . ID=LTnewLM_300036500.1;Parent=LTnewLM_300036500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 1081926 1083089 . - . ID=LTnewLM_300036500.1:pseudogenic_exon:1;Parent=LTnewLM_300036500.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1081926 1083089 . - . ID=LTnewLM_300036500.1:pep;Derives_from=LTnewLM_300036500.1;orthologous_to=LmjF.30.2910_mRNA;ortholog_cluster=OG0007593;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_30 Pfam protein_match 1082070 1082963 . - . Parent=LTnewLM_300036500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1082346 1082957 . - . Parent=LTnewLM_300036500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 1082499 1082825 . - . Parent=LTnewLM_300036500.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 ### LTnewLM_30 AUGUSTUS gene 1084548 1086479 1 - . ID=LTnewLM_300036600 LTnewLM_30 AUGUSTUS mRNA 1084548 1086479 1 - . ID=LTnewLM_300036600.1;Parent=LTnewLM_300036600 LTnewLM_30 AUGUSTUS CDS 1084548 1086479 1 - 0 ID=LTnewLM_300036600.1:CDS:1;Parent=LTnewLM_300036600.1 ### LTnewLM_30 . polypeptide 1084548 1086479 . - . ID=LTnewLM_300036600.1:pep;Derives_from=LTnewLM_300036600.1;orthologous_to=LmjF.30.2920_mRNA;ortholog_cluster=OG0004314;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1087212 1087787 1 - . ID=LTnewLM_300036700 LTnewLM_30 AUGUSTUS mRNA 1087212 1087787 1 - . ID=LTnewLM_300036700.1;Parent=LTnewLM_300036700 LTnewLM_30 AUGUSTUS CDS 1087212 1087787 1 - 0 ID=LTnewLM_300036700.1:CDS:1;Parent=LTnewLM_300036700.1 ### LTnewLM_30 . polypeptide 1087212 1087787 . - . ID=LTnewLM_300036700.1:pep;Derives_from=LTnewLM_300036700.1;orthologous_to=LmjF.30.2930_mRNA;ortholog_cluster=OG0004315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1089054 1090076 1 - . ID=LTnewLM_300036800 LTnewLM_30 AUGUSTUS mRNA 1089054 1090076 1 - . ID=LTnewLM_300036800.1;Parent=LTnewLM_300036800 LTnewLM_30 AUGUSTUS CDS 1089054 1090076 1 - 0 ID=LTnewLM_300036800.1:CDS:1;Parent=LTnewLM_300036800.1 ### LTnewLM_30 . polypeptide 1089054 1090076 . - . ID=LTnewLM_300036800.1:pep;Derives_from=LTnewLM_300036800.1;orthologous_to=LmjF.30.2940_mRNA;ortholog_cluster=OG0004316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1092950 1095163 1 - . ID=LTnewLM_300036900 LTnewLM_30 AUGUSTUS mRNA 1092950 1095163 1 - . ID=LTnewLM_300036900.1;Parent=LTnewLM_300036900 LTnewLM_30 AUGUSTUS CDS 1092950 1095163 1 - 0 ID=LTnewLM_300036900.1:CDS:1;Parent=LTnewLM_300036900.1 ### LTnewLM_30 . polypeptide 1092950 1095163 . - . ID=LTnewLM_300036900.1:pep;Derives_from=LTnewLM_300036900.1;orthologous_to=LTnewLM_220022900.1,LmjF.30.2950_mRNA;ortholog_cluster=OG0000386;product=term%3DPhosphatidylinositol-specific phospholipase C%2C X domain/Phosphatidylinositol-specific phospholipase C%2C Y domain/C2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00388|Pfam:PF00387|Pfam:PF00168;Ontology_term=GO:0006629,GO:0005515,GO:0007165,GO:0004435,GO:0035556 LTnewLM_30 Pfam protein_match 1093052 1093348 . - . Parent=LTnewLM_300036900.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1093394 1093699 . - . Parent=LTnewLM_300036900.1:pep;Name=PF00387;signature_desc=Phosphatidylinositol-specific phospholipase C%2C Y domain;Ontology_term=GO:0004435,GO:0006629,GO:0007165,GO:0035556 LTnewLM_30 Pfam protein_match 1093847 1094266 . - . Parent=LTnewLM_300036900.1:pep;Name=PF00388;signature_desc=Phosphatidylinositol-specific phospholipase C%2C X domain ### LTnewLM_30 AUGUSTUS gene 1096693 1097370 1 - . ID=LTnewLM_300037000 LTnewLM_30 AUGUSTUS mRNA 1096693 1097370 1 - . ID=LTnewLM_300037000.1;Parent=LTnewLM_300037000 LTnewLM_30 AUGUSTUS CDS 1096693 1097370 1 - 0 ID=LTnewLM_300037000.1:CDS:1;Parent=LTnewLM_300037000.1 ### LTnewLM_30 . polypeptide 1096693 1097370 . - . ID=LTnewLM_300037000.1:pep;Derives_from=LTnewLM_300037000.1;orthologous_to=LmjF.30.2960_mRNA;ortholog_cluster=OG0004317;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1100422 1101507 1 - . ID=LTnewLM_300037100 LTnewLM_30 AUGUSTUS mRNA 1100422 1101507 1 - . ID=LTnewLM_300037100.1;Parent=LTnewLM_300037100 LTnewLM_30 AUGUSTUS CDS 1100422 1101507 1 - 0 ID=LTnewLM_300037100.1:CDS:1;Parent=LTnewLM_300037100.1 ### LTnewLM_30 . polypeptide 1100422 1101507 . - . ID=LTnewLM_300037100.1:pep;Derives_from=LTnewLM_300037100.1;orthologous_to=LTnewLM_300037200.1,LTnewLM_360031500.1,LmjF.30.2970_mRNA,LmjF.30.2980_mRNA;ortholog_cluster=OG0000094;product=term%3DGlyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain/Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00044|Pfam:PF02800;Ontology_term=GO:0055114,GO:0016620 LTnewLM_30 Pfam protein_match 1100509 1100994 . - . Parent=LTnewLM_300037100.1:pep;Name=PF02800;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016620,GO:0055114 LTnewLM_30 Pfam protein_match 1101157 1101498 . - . Parent=LTnewLM_300037100.1:pep;Name=PF00044;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016620,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 1102226 1103311 1 - . ID=LTnewLM_300037200 LTnewLM_30 AUGUSTUS mRNA 1102226 1103311 1 - . ID=LTnewLM_300037200.1;Parent=LTnewLM_300037200 LTnewLM_30 AUGUSTUS CDS 1102226 1103311 1 - 0 ID=LTnewLM_300037200.1:CDS:1;Parent=LTnewLM_300037200.1 ### LTnewLM_30 . polypeptide 1102226 1103311 . - . ID=LTnewLM_300037200.1:pep;Derives_from=LTnewLM_300037200.1;orthologous_to=LTnewLM_300037100.1,LTnewLM_360031500.1,LmjF.30.2970_mRNA,LmjF.30.2980_mRNA;ortholog_cluster=OG0000094;product=term%3DGlyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain/Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00044|Pfam:PF02800;Ontology_term=GO:0055114,GO:0016620 LTnewLM_30 Pfam protein_match 1102313 1102798 . - . Parent=LTnewLM_300037200.1:pep;Name=PF02800;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016620,GO:0055114 LTnewLM_30 Pfam protein_match 1102961 1103302 . - . Parent=LTnewLM_300037200.1:pep;Name=PF00044;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016620,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 1104143 1105369 1 - . ID=LTnewLM_300037300 LTnewLM_30 AUGUSTUS mRNA 1104143 1105369 1 - . ID=LTnewLM_300037300.1;Parent=LTnewLM_300037300 LTnewLM_30 AUGUSTUS CDS 1104143 1105369 1 - 0 ID=LTnewLM_300037300.1:CDS:1;Parent=LTnewLM_300037300.1 ### LTnewLM_30 . polypeptide 1104143 1105369 . - . ID=LTnewLM_300037300.1:pep;Derives_from=LTnewLM_300037300.1;orthologous_to=LmjF.30.2990_mRNA;ortholog_cluster=OG0004318;product=term%3DProtein of unknown function (DUF2817)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10994 LTnewLM_30 Pfam protein_match 1104203 1105228 . - . Parent=LTnewLM_300037300.1:pep;Name=PF10994;signature_desc=Protein of unknown function (DUF2817) ### LTnewLM_30 AUGUSTUS gene 1106023 1106637 1 - . ID=LTnewLM_300037400 LTnewLM_30 AUGUSTUS mRNA 1106023 1106637 1 - . ID=LTnewLM_300037400.1;Parent=LTnewLM_300037400 LTnewLM_30 AUGUSTUS CDS 1106023 1106637 1 - 0 ID=LTnewLM_300037400.1:CDS:1;Parent=LTnewLM_300037400.1 ### LTnewLM_30 . polypeptide 1106023 1106637 . - . ID=LTnewLM_300037400.1:pep;Derives_from=LTnewLM_300037400.1;orthologous_to=LmjF.30.3000_mRNA;ortholog_cluster=OG0004319;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1107179 1109722 1 - . ID=LTnewLM_300037500 LTnewLM_30 AUGUSTUS mRNA 1107179 1109722 1 - . ID=LTnewLM_300037500.1;Parent=LTnewLM_300037500 LTnewLM_30 AUGUSTUS CDS 1107179 1109722 1 - 0 ID=LTnewLM_300037500.1:CDS:1;Parent=LTnewLM_300037500.1 ### LTnewLM_30 . polypeptide 1107179 1109722 . - . ID=LTnewLM_300037500.1:pep;Derives_from=LTnewLM_300037500.1;orthologous_to=LmjF.30.3010_mRNA;ortholog_cluster=OG0004320;product=term%3DTetratricopeptide repeat/TPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF13181|Pfam:PF13431|Pfam:PF00515|Pfam:PF07719|Pfam:PF13414|Pfam:PF13174|Pfam:PF13424|Pfam:PF13176;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107281 1107433 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107380 1107469 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107380 1107475 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107380 1107475 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107380 1107544 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107581 1107673 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107587 1107769 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107590 1107676 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107590 1107676 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107590 1107676 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107599 1107679 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107692 1107775 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107785 1107967 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107788 1107880 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107788 1107880 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107791 1107880 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107893 1107988 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107893 1107988 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107896 1108084 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107947 1108054 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_30 Pfam protein_match 1107992 1108087 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1107992 1108087 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107992 1108159 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1107998 1108087 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108031 1108123 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13431;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108049 1108159 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_30 Pfam protein_match 1108094 1108186 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108199 1108291 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108199 1108357 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108202 1108285 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108211 1108282 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108265 1108354 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_30 Pfam protein_match 1108295 1108486 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108298 1108393 . - . Parent=LTnewLM_300037500.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108298 1108393 . - . Parent=LTnewLM_300037500.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108298 1108393 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1108334 1108432 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13431;signature_desc=Tetratricopeptide repeat LTnewLM_30 Pfam protein_match 1108400 1108498 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1109258 1109410 . - . Parent=LTnewLM_300037500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_30 AUGUSTUS gene 1111069 1111455 1 - . ID=LTnewLM_300037600 LTnewLM_30 AUGUSTUS mRNA 1111069 1111455 1 - . ID=LTnewLM_300037600.1;Parent=LTnewLM_300037600 LTnewLM_30 AUGUSTUS CDS 1111069 1111455 1 - 0 ID=LTnewLM_300037600.1:CDS:1;Parent=LTnewLM_300037600.1 ### LTnewLM_30 . polypeptide 1111069 1111455 . - . ID=LTnewLM_300037600.1:pep;Derives_from=LTnewLM_300037600.1;orthologous_to=LmjF.30.3015_mRNA;ortholog_cluster=OG0004321;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_30 Pfam protein_match 1111183 1111404 . - . Parent=LTnewLM_300037600.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_30 AUGUSTUS gene 1113075 1114040 1 - . ID=LTnewLM_300037700 LTnewLM_30 AUGUSTUS mRNA 1113075 1114040 1 - . ID=LTnewLM_300037700.1;Parent=LTnewLM_300037700 LTnewLM_30 AUGUSTUS CDS 1113075 1114040 1 - 0 ID=LTnewLM_300037700.1:CDS:1;Parent=LTnewLM_300037700.1 ### LTnewLM_30 . polypeptide 1113075 1114040 . - . ID=LTnewLM_300037700.1:pep;Derives_from=LTnewLM_300037700.1;orthologous_to=LmjF.30.3020_mRNA;ortholog_cluster=OG0004322;product=term%3DKrr1 KH1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17903 LTnewLM_30 Pfam protein_match 1113714 1113947 . - . Parent=LTnewLM_300037700.1:pep;Name=PF17903;signature_desc=Krr1 KH1 domain ### LTnewLM_30 AUGUSTUS gene 1115233 1115520 1 - . ID=LTnewLM_300037800 LTnewLM_30 AUGUSTUS mRNA 1115233 1115520 1 - . ID=LTnewLM_300037800.1;Parent=LTnewLM_300037800 LTnewLM_30 AUGUSTUS CDS 1115233 1115520 1 - 0 ID=LTnewLM_300037800.1:CDS:1;Parent=LTnewLM_300037800.1 ### LTnewLM_30 . polypeptide 1115233 1115520 . - . ID=LTnewLM_300037800.1:pep;Derives_from=LTnewLM_300037800.1;orthologous_to=LmjF.30.3025_mRNA;ortholog_cluster=OG0004323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1116946 1118445 1 - . ID=LTnewLM_300037900 LTnewLM_30 AUGUSTUS mRNA 1116946 1118445 1 - . ID=LTnewLM_300037900.1;Parent=LTnewLM_300037900 LTnewLM_30 AUGUSTUS CDS 1116946 1118445 1 - 0 ID=LTnewLM_300037900.1:CDS:1;Parent=LTnewLM_300037900.1 ### LTnewLM_30 . polypeptide 1116946 1118445 . - . ID=LTnewLM_300037900.1:pep;Derives_from=LTnewLM_300037900.1;orthologous_to=LmjF.30.3030_mRNA;ortholog_cluster=OG0004324;product=term%3DCyclin M transmembrane N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595 LTnewLM_30 Pfam protein_match 1117909 1118373 . - . Parent=LTnewLM_300037900.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_30 AUGUSTUS gene 1120206 1121801 1 - . ID=LTnewLM_300038000 LTnewLM_30 AUGUSTUS mRNA 1120206 1121801 1 - . ID=LTnewLM_300038000.1;Parent=LTnewLM_300038000 LTnewLM_30 AUGUSTUS CDS 1120206 1121801 1 - 0 ID=LTnewLM_300038000.1:CDS:1;Parent=LTnewLM_300038000.1 ### LTnewLM_30 . polypeptide 1120206 1121801 . - . ID=LTnewLM_300038000.1:pep;Derives_from=LTnewLM_300038000.1;orthologous_to=LmjF.30.3040_mRNA;ortholog_cluster=OG0004325;product=term%3DEukaryotic translation initiation factor 3 subunit 7 (eIF-3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05091;Ontology_term=GO:0005737,GO:0005852,GO:0003743 LTnewLM_30 Pfam protein_match 1120299 1121795 . - . Parent=LTnewLM_300038000.1:pep;Name=PF05091;signature_desc=Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);Ontology_term=GO:0003743,GO:0005737,GO:0005852 ### LTnewLM_30 Liftoff gene 1122617 1128745 . - . ID=LTnewLM_300038100;coverage=1.0;sequence_ID=0.952;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.3050_0 LTnewLM_30 Liftoff mRNA 1122617 1128745 . - . ID=LTnewLM_300038100.1;Parent=LTnewLM_300038100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1122617 1128745 . - 0 ID=LTnewLM_300038100.1:CDS:1;Parent=LTnewLM_300038100.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1122617 1128745 . - . ID=LTnewLM_300038100.1:pep;Derives_from=LTnewLM_300038100.1;orthologous_to=LmjF.30.3050_mRNA;ortholog_cluster=OG0004326;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1122863 1123624 . - . Parent=LTnewLM_300038100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1122875 1123627 . - . Parent=LTnewLM_300038100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_30 AUGUSTUS gene 1132188 1135760 1 - . ID=LTnewLM_300038200 LTnewLM_30 AUGUSTUS mRNA 1132188 1135760 1 - . ID=LTnewLM_300038200.1;Parent=LTnewLM_300038200 LTnewLM_30 AUGUSTUS CDS 1132188 1135760 1 - 0 ID=LTnewLM_300038200.1:CDS:1;Parent=LTnewLM_300038200.1 ### LTnewLM_30 . polypeptide 1132188 1135760 . - . ID=LTnewLM_300038200.1:pep;Derives_from=LTnewLM_300038200.1;orthologous_to=LmjF.30.3060_mRNA;ortholog_cluster=OG0004327;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_30 Pfam protein_match 1134549 1135448 . - . Parent=LTnewLM_300038200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_30 Pfam protein_match 1135101 1135508 . - . Parent=LTnewLM_300038200.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_30 . polypeptide 1137192 1138355 . - . ID=LTnewLM_300038300.1:pep;Derives_from=LTnewLM_300038300.1;orthologous_to=LmjF.30.3070.1_mRNA,LmjF.30.3070.2_mRNA;ortholog_cluster=OG0000533;product=term%3DtRNA (Guanine-1)-methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01746 LTnewLM_30 Pfam protein_match 1137372 1137914 . - . Parent=LTnewLM_300038300.1:pep;Name=PF01746;signature_desc=tRNA (Guanine-1)-methyltransferase ### LTnewLM_30 . polypeptide 1137192 1138435 . - . ID=LTnewLM_300038300.2:pep;Derives_from=LTnewLM_300038300.2;product=term%3Dhypothetical protein ### LTnewLM_30 . pseudogene 1137192 1138526 . - . ID=LTnewLM_300038300:pseudogene;coverage=0.999;sequence_ID=0.924;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.30.3070_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 1137192 1138426 . - . ID=LTnewLM_300038300.1;Parent=LTnewLM_300038300:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 1137192 1138355 . - . ID=LTnewLM_300038300.1:pseudogenic_exon:1;Parent=LTnewLM_300038300.1;extra_copy_number=0 LTnewLM_30 . pseudogenic_transcript 1137192 1138526 . - . ID=LTnewLM_300038300.2;Parent=LTnewLM_300038300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 1137192 1138435 . - . ID=LTnewLM_300038300.2:pseudogenic_exon:1;Parent=LTnewLM_300038300.2;extra_copy_number=0 ### LTnewLM_30 AUGUSTUS gene 1140184 1141209 1 - . ID=LTnewLM_300038400 LTnewLM_30 AUGUSTUS mRNA 1140184 1141209 1 - . ID=LTnewLM_300038400.1;Parent=LTnewLM_300038400 LTnewLM_30 AUGUSTUS CDS 1140184 1141209 1 - 0 ID=LTnewLM_300038400.1:CDS:1;Parent=LTnewLM_300038400.1 ### LTnewLM_30 . polypeptide 1140184 1141209 . - . ID=LTnewLM_300038400.1:pep;Derives_from=LTnewLM_300038400.1;orthologous_to=LmjF.30.3080_mRNA;ortholog_cluster=OG0004328;product=term%3DGHMP kinases N terminal domain/GHMP kinases C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00288|Pfam:PF08544;Ontology_term=GO:0005524 LTnewLM_30 Pfam protein_match 1140310 1140546 . - . Parent=LTnewLM_300038400.1:pep;Name=PF08544;signature_desc=GHMP kinases C terminal LTnewLM_30 Pfam protein_match 1140754 1140942 . - . Parent=LTnewLM_300038400.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 ### LTnewLM_30 AUGUSTUS gene 1143650 1144648 1 - . ID=LTnewLM_300038500 LTnewLM_30 AUGUSTUS mRNA 1143650 1144648 1 - . ID=LTnewLM_300038500.1;Parent=LTnewLM_300038500 LTnewLM_30 AUGUSTUS CDS 1143650 1144648 1 - 0 ID=LTnewLM_300038500.1:CDS:1;Parent=LTnewLM_300038500.1 ### LTnewLM_30 . polypeptide 1143650 1144648 . - . ID=LTnewLM_300038500.1:pep;Derives_from=LTnewLM_300038500.1;orthologous_to=LmjF.30.3090_mRNA;ortholog_cluster=OG0004329;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1145699 1147618 1 - . ID=LTnewLM_300038600 LTnewLM_30 AUGUSTUS mRNA 1145699 1147618 1 - . ID=LTnewLM_300038600.1;Parent=LTnewLM_300038600 LTnewLM_30 AUGUSTUS CDS 1145699 1147618 1 - 0 ID=LTnewLM_300038600.1:CDS:1;Parent=LTnewLM_300038600.1 ### LTnewLM_30 . polypeptide 1145699 1147618 . - . ID=LTnewLM_300038600.1:pep;Derives_from=LTnewLM_300038600.1;orthologous_to=LmjF.30.3100_mRNA;ortholog_cluster=OG0004330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1150029 1151177 1 - . ID=LTnewLM_300038700 LTnewLM_30 AUGUSTUS mRNA 1150029 1151177 1 - . ID=LTnewLM_300038700.1;Parent=LTnewLM_300038700 LTnewLM_30 AUGUSTUS CDS 1150029 1151177 1 - 0 ID=LTnewLM_300038700.1:CDS:1;Parent=LTnewLM_300038700.1 ### LTnewLM_30 . polypeptide 1150029 1151177 . - . ID=LTnewLM_300038700.1:pep;Derives_from=LTnewLM_300038700.1;orthologous_to=LmjF.30.3110_mRNA;ortholog_cluster=OG0004331;product=term%3DAdenosylmethionine decarboxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01536;Ontology_term=GO:0004014,GO:0008295,GO:0006597 LTnewLM_30 Pfam protein_match 1150110 1151087 . - . Parent=LTnewLM_300038700.1:pep;Name=PF01536;signature_desc=Adenosylmethionine decarboxylase;Ontology_term=GO:0004014,GO:0006597,GO:0008295 ### LTnewLM_30 AUGUSTUS gene 1156431 1157384 1 - . ID=LTnewLM_300038800 LTnewLM_30 AUGUSTUS mRNA 1156431 1157384 1 - . ID=LTnewLM_300038800.1;Parent=LTnewLM_300038800 LTnewLM_30 AUGUSTUS CDS 1156431 1157384 1 - 0 ID=LTnewLM_300038800.1:CDS:1;Parent=LTnewLM_300038800.1 ### LTnewLM_30 . polypeptide 1156431 1157384 . - . ID=LTnewLM_300038800.1:pep;Derives_from=LTnewLM_300038800.1;orthologous_to=LmjF.30.3120_mRNA;ortholog_cluster=OG0004332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1159332 1162256 1 - . ID=LTnewLM_300038900 LTnewLM_30 AUGUSTUS mRNA 1159332 1162256 1 - . ID=LTnewLM_300038900.1;Parent=LTnewLM_300038900 LTnewLM_30 AUGUSTUS CDS 1159332 1162256 1 - 0 ID=LTnewLM_300038900.1:CDS:1;Parent=LTnewLM_300038900.1 ### LTnewLM_30 . polypeptide 1159332 1162256 . - . ID=LTnewLM_300038900.1:pep;Derives_from=LTnewLM_300038900.1;orthologous_to=LmjF.30.3130_mRNA;ortholog_cluster=OG0004333;product=term%3DtRNA synthetases class I (I%2C L%2C M and V)/tRNA synthetases class I (M)/Anticodon-binding domain of tRNA ligase/Valyl tRNA synthetase tRNA binding arm%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00133|Pfam:PF09334|Pfam:PF08264|Pfam:PF10458;Ontology_term=GO:0000166,GO:0005737,GO:0005524,GO:0006438,GO:0004832,GO:0004812,GO:0006418 LTnewLM_30 Pfam protein_match 1159350 1159541 . - . Parent=LTnewLM_300038900.1:pep;Name=PF10458;signature_desc=Valyl tRNA synthetase tRNA binding arm;Ontology_term=GO:0000166,GO:0004832,GO:0005524,GO:0006438,GO:0005737 LTnewLM_30 Pfam protein_match 1159737 1160183 . - . Parent=LTnewLM_300038900.1:pep;Name=PF08264;signature_desc=Anticodon-binding domain of tRNA ligase;Ontology_term=GO:0000166,GO:0006418 LTnewLM_30 Pfam protein_match 1160337 1162196 . - . Parent=LTnewLM_300038900.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_30 Pfam protein_match 1161660 1162115 . - . Parent=LTnewLM_300038900.1:pep;Name=PF09334;signature_desc=tRNA synthetases class I (M);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_30 Liftoff gene 1175601 1176293 . - . ID=LTnewLM_300039000;coverage=1.0;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.3140_0 LTnewLM_30 Liftoff mRNA 1175601 1176293 . - . ID=LTnewLM_300039000.1;Parent=LTnewLM_300039000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1175601 1176293 . - 0 ID=LTnewLM_300039000.1:CDS:1;Parent=LTnewLM_300039000.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1175601 1176293 . - . ID=LTnewLM_300039000.1:pep;Derives_from=LTnewLM_300039000.1;orthologous_to=LmjF.30.3140_mRNA;ortholog_cluster=OG0004334;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1178106 1178744 1 - . ID=LTnewLM_300039100 LTnewLM_30 AUGUSTUS mRNA 1178106 1178744 1 - . ID=LTnewLM_300039100.1;Parent=LTnewLM_300039100 LTnewLM_30 AUGUSTUS CDS 1178106 1178744 1 - 0 ID=LTnewLM_300039100.1:CDS:1;Parent=LTnewLM_300039100.1 ### LTnewLM_30 . polypeptide 1178106 1178744 . - . ID=LTnewLM_300039100.1:pep;Derives_from=LTnewLM_300039100.1;orthologous_to=LmjF.30.3150_mRNA;ortholog_cluster=OG0004335;product=term%3DTranslocon-associated protein beta (TRAPB)/CARDB/Domain of unknown function DUF11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05753|Pfam:PF07705|Pfam:PF01345;Ontology_term=GO:0005727,GO:0005783,GO:0016021 LTnewLM_30 Pfam protein_match 1178349 1178684 . - . Parent=LTnewLM_300039100.1:pep;Name=PF05753;signature_desc=Translocon-associated protein beta (TRAPB);Ontology_term=GO:0005783,GO:0016021 LTnewLM_30 Pfam protein_match 1178367 1178636 . - . Parent=LTnewLM_300039100.1:pep;Name=PF01345;signature_desc=Domain of unknown function DUF11;Ontology_term=GO:0005727 LTnewLM_30 Pfam protein_match 1178403 1178639 . - . Parent=LTnewLM_300039100.1:pep;Name=PF07705;signature_desc=CARDB ### LTnewLM_30 AUGUSTUS gene 1180000 1180947 1 - . ID=LTnewLM_300039200 LTnewLM_30 AUGUSTUS mRNA 1180000 1180947 1 - . ID=LTnewLM_300039200.1;Parent=LTnewLM_300039200 LTnewLM_30 AUGUSTUS CDS 1180000 1180947 1 - 0 ID=LTnewLM_300039200.1:CDS:1;Parent=LTnewLM_300039200.1 ### LTnewLM_30 . polypeptide 1180000 1180947 . - . ID=LTnewLM_300039200.1:pep;Derives_from=LTnewLM_300039200.1;orthologous_to=LmjF.30.3160_mRNA;ortholog_cluster=OG0004336;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1183424 1184761 1 - . ID=LTnewLM_300039300 LTnewLM_30 AUGUSTUS mRNA 1183424 1184761 1 - . ID=LTnewLM_300039300.1;Parent=LTnewLM_300039300 LTnewLM_30 AUGUSTUS CDS 1183424 1184761 1 - 0 ID=LTnewLM_300039300.1:CDS:1;Parent=LTnewLM_300039300.1 ### LTnewLM_30 . polypeptide 1183424 1184761 . - . ID=LTnewLM_300039300.1:pep;Derives_from=LTnewLM_300039300.1;orthologous_to=LmjF.30.3170_mRNA;ortholog_cluster=OG0004337;product=term%3DTrichohyalin-plectin-homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13868 LTnewLM_30 Pfam protein_match 1183508 1184554 . - . Parent=LTnewLM_300039300.1:pep;Name=PF13868;signature_desc=Trichohyalin-plectin-homology domain ### LTnewLM_30 Liftoff gene 1187273 1187716 . - . ID=LTnewLM_300039400;coverage=1.0;sequence_ID=0.972;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.3180_0 LTnewLM_30 Liftoff mRNA 1187273 1187716 . - . ID=LTnewLM_300039400.1;Parent=LTnewLM_300039400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1187273 1187716 . - 0 ID=LTnewLM_300039400.1:CDS:1;Parent=LTnewLM_300039400.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1187273 1187716 . - . ID=LTnewLM_300039400.1:pep;Derives_from=LTnewLM_300039400.1;orthologous_to=LmjF.30.3180_mRNA;ortholog_cluster=OG0004338;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_30 Pfam protein_match 1187513 1187680 . - . Parent=LTnewLM_300039400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_30 AUGUSTUS gene 1189887 1191191 1 - . ID=LTnewLM_300039500 LTnewLM_30 AUGUSTUS mRNA 1189887 1191191 1 - . ID=LTnewLM_300039500.1;Parent=LTnewLM_300039500 LTnewLM_30 AUGUSTUS CDS 1189887 1191191 1 - 0 ID=LTnewLM_300039500.1:CDS:1;Parent=LTnewLM_300039500.1 ### LTnewLM_30 . polypeptide 1189887 1191191 . - . ID=LTnewLM_300039500.1:pep;Derives_from=LTnewLM_300039500.1;orthologous_to=LmjF.30.3190_mRNA;ortholog_cluster=OG0004339;product=term%3DHydroxymethylglutaryl-coenzyme A reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00368;Ontology_term=GO:0050662,GO:0055114,GO:0015936,GO:0004420 LTnewLM_30 Pfam protein_match 1189908 1191041 . - . Parent=LTnewLM_300039500.1:pep;Name=PF00368;signature_desc=Hydroxymethylglutaryl-coenzyme A reductase;Ontology_term=GO:0004420,GO:0050662,GO:0015936,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 1192783 1193121 1 - . ID=LTnewLM_300039600 LTnewLM_30 AUGUSTUS mRNA 1192783 1193121 1 - . ID=LTnewLM_300039600.1;Parent=LTnewLM_300039600 LTnewLM_30 AUGUSTUS CDS 1192783 1193121 1 - 0 ID=LTnewLM_300039600.1:CDS:1;Parent=LTnewLM_300039600.1 ### LTnewLM_30 . polypeptide 1192783 1193121 . - . ID=LTnewLM_300039600.1:pep;Derives_from=LTnewLM_300039600.1;orthologous_to=LTnewLM_280010500.1,LmjF.28.0540_mRNA;ortholog_cluster=OG0000417;product=term%3DRibosomal protein S26e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01283;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_30 Pfam protein_match 1192816 1193121 . - . Parent=LTnewLM_300039600.1:pep;Name=PF01283;signature_desc=Ribosomal protein S26e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1193786 1196437 1 - . ID=LTnewLM_300039700 LTnewLM_30 AUGUSTUS mRNA 1193786 1196437 1 - . ID=LTnewLM_300039700.1;Parent=LTnewLM_300039700 LTnewLM_30 AUGUSTUS CDS 1193786 1196437 1 - 0 ID=LTnewLM_300039700.1:CDS:1;Parent=LTnewLM_300039700.1 ### LTnewLM_30 . polypeptide 1193786 1196437 . - . ID=LTnewLM_300039700.1:pep;Derives_from=LTnewLM_300039700.1;orthologous_to=LmjF.30.3210_mRNA;ortholog_cluster=OG0004340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1196866 1198110 1 - . ID=LTnewLM_300039800 LTnewLM_30 AUGUSTUS mRNA 1196866 1198110 1 - . ID=LTnewLM_300039800.1;Parent=LTnewLM_300039800 LTnewLM_30 AUGUSTUS CDS 1196866 1198110 1 - 0 ID=LTnewLM_300039800.1:CDS:1;Parent=LTnewLM_300039800.1 ### LTnewLM_30 . polypeptide 1196866 1198110 . - . ID=LTnewLM_300039800.1:pep;Derives_from=LTnewLM_300039800.1;orthologous_to=LmjF.30.3220_mRNA;ortholog_cluster=OG0004341;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1198709 1199134 1 - . ID=LTnewLM_300039900 LTnewLM_30 AUGUSTUS mRNA 1198709 1199134 1 - . ID=LTnewLM_300039900.1;Parent=LTnewLM_300039900 LTnewLM_30 AUGUSTUS CDS 1198709 1199134 1 - 0 ID=LTnewLM_300039900.1:CDS:1;Parent=LTnewLM_300039900.1 ### LTnewLM_30 . polypeptide 1198709 1199134 . - . ID=LTnewLM_300039900.1:pep;Derives_from=LTnewLM_300039900.1;orthologous_to=LmjF.30.3230_mRNA;ortholog_cluster=OG0004342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1199535 1199822 1 - . ID=LTnewLM_300040000 LTnewLM_30 AUGUSTUS mRNA 1199535 1199822 1 - . ID=LTnewLM_300040000.1;Parent=LTnewLM_300040000 LTnewLM_30 AUGUSTUS CDS 1199535 1199822 1 - 0 ID=LTnewLM_300040000.1:CDS:1;Parent=LTnewLM_300040000.1 ### LTnewLM_30 . polypeptide 1199535 1199822 . - . ID=LTnewLM_300040000.1:pep;Derives_from=LTnewLM_300040000.1;orthologous_to=LmjF.30.3235_mRNA;ortholog_cluster=OG0004343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1203708 1205492 1 + . ID=LTnewLM_300040100 LTnewLM_30 AUGUSTUS mRNA 1203708 1205492 1 + . ID=LTnewLM_300040100.1;Parent=LTnewLM_300040100 LTnewLM_30 AUGUSTUS CDS 1203708 1205492 1 + 0 ID=LTnewLM_300040100.1:CDS:1;Parent=LTnewLM_300040100.1 ### LTnewLM_30 . polypeptide 1203708 1205492 . + . ID=LTnewLM_300040100.1:pep;Derives_from=LTnewLM_300040100.1;orthologous_to=LmjF.30.3240_mRNA;ortholog_cluster=OG0004344;product=term%3DtRNA synthetases class I (E and Q)%2C catalytic domain/tRNA synthetases class I (E and Q)%2C anti-codon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00749|Pfam:PF03950;Ontology_term=GO:0000166,GO:0005737,GO:0016876,GO:0005524,GO:0043039,GO:0004812,GO:0006418 LTnewLM_30 Pfam protein_match 1203843 1204757 . + . Parent=LTnewLM_300040100.1:pep;Name=PF00749;signature_desc=tRNA synthetases class I (E and Q)%2C catalytic domain;Ontology_term=GO:0005524,GO:0016876,GO:0043039 LTnewLM_30 Pfam protein_match 1204767 1205297 . + . Parent=LTnewLM_300040100.1:pep;Name=PF03950;signature_desc=tRNA synthetases class I (E and Q)%2C anti-codon binding domain;Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418,GO:0005737 ### LTnewLM_30 AUGUSTUS gene 1206463 1209552 1 + . ID=LTnewLM_300040200 LTnewLM_30 AUGUSTUS mRNA 1206463 1209552 1 + . ID=LTnewLM_300040200.1;Parent=LTnewLM_300040200 LTnewLM_30 AUGUSTUS CDS 1206463 1209552 1 + 0 ID=LTnewLM_300040200.1:CDS:1;Parent=LTnewLM_300040200.1 ### LTnewLM_30 . polypeptide 1206463 1209552 . + . ID=LTnewLM_300040200.1:pep;Derives_from=LTnewLM_300040200.1;orthologous_to=LmjF.30.3250_mRNA;ortholog_cluster=OG0004345;product=term%3DAAA domain/DEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13401|Pfam:PF00270|Pfam:PF00271|Pfam:PF04408;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_30 Pfam protein_match 1207009 1207362 . + . Parent=LTnewLM_300040200.1:pep;Name=PF13401;signature_desc=AAA domain LTnewLM_30 Pfam protein_match 1207009 1207530 . + . Parent=LTnewLM_300040200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_30 Pfam protein_match 1208179 1208448 . + . Parent=LTnewLM_300040200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_30 Pfam protein_match 1208635 1208958 . + . Parent=LTnewLM_300040200.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 ### LTnewLM_30 AUGUSTUS gene 1210626 1211861 1 + . ID=LTnewLM_300040300 LTnewLM_30 AUGUSTUS mRNA 1210626 1211861 1 + . ID=LTnewLM_300040300.1;Parent=LTnewLM_300040300 LTnewLM_30 AUGUSTUS CDS 1210626 1211861 1 + 0 ID=LTnewLM_300040300.1:CDS:1;Parent=LTnewLM_300040300.1 ### LTnewLM_30 . polypeptide 1210626 1211861 . + . ID=LTnewLM_300040300.1:pep;Derives_from=LTnewLM_300040300.1;orthologous_to=LmjF.30.3260_mRNA;ortholog_cluster=OG0004346;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13637|Pfam:PF00023|Pfam:PF13857|Pfam:PF13606;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1210683 1210964 . + . Parent=LTnewLM_300040300.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_30 Pfam protein_match 1210827 1210940 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_30 Pfam protein_match 1210881 1210958 . + . Parent=LTnewLM_300040300.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1210992 1211279 . + . Parent=LTnewLM_300040300.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_30 Pfam protein_match 1211094 1211249 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_30 Pfam protein_match 1211148 1211291 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_30 Pfam protein_match 1211193 1211270 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1211196 1211279 . + . Parent=LTnewLM_300040300.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1211202 1211480 . + . Parent=LTnewLM_300040300.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_30 Pfam protein_match 1211229 1211348 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_30 Pfam protein_match 1211247 1211405 . + . Parent=LTnewLM_300040300.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_30 AUGUSTUS gene 1212544 1213041 1 + . ID=LTnewLM_300040400 LTnewLM_30 AUGUSTUS mRNA 1212544 1213041 1 + . ID=LTnewLM_300040400.1;Parent=LTnewLM_300040400 LTnewLM_30 AUGUSTUS CDS 1212544 1213041 1 + 0 ID=LTnewLM_300040400.1:CDS:1;Parent=LTnewLM_300040400.1 ### LTnewLM_30 . polypeptide 1212544 1213041 . + . ID=LTnewLM_300040400.1:pep;Derives_from=LTnewLM_300040400.1;orthologous_to=LmjF.30.3270_mRNA;ortholog_cluster=OG0004347;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1213994 1215109 1 + . ID=LTnewLM_300040500 LTnewLM_30 AUGUSTUS mRNA 1213994 1215109 1 + . ID=LTnewLM_300040500.1;Parent=LTnewLM_300040500 LTnewLM_30 AUGUSTUS CDS 1213994 1215109 1 + 0 ID=LTnewLM_300040500.1:CDS:1;Parent=LTnewLM_300040500.1 ### LTnewLM_30 . polypeptide 1213994 1215109 . + . ID=LTnewLM_300040500.1:pep;Derives_from=LTnewLM_300040500.1;orthologous_to=LmjF.30.3280_mRNA;ortholog_cluster=OG0004348;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_30 Pfam protein_match 1214087 1214752 . + . Parent=LTnewLM_300040500.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_30 AUGUSTUS gene 1216456 1219578 1 + . ID=LTnewLM_300040600 LTnewLM_30 AUGUSTUS mRNA 1216456 1219578 1 + . ID=LTnewLM_300040600.1;Parent=LTnewLM_300040600 LTnewLM_30 AUGUSTUS CDS 1216456 1219578 1 + 0 ID=LTnewLM_300040600.1:CDS:1;Parent=LTnewLM_300040600.1 ### LTnewLM_30 . polypeptide 1216456 1219578 . + . ID=LTnewLM_300040600.1:pep;Derives_from=LTnewLM_300040600.1;orthologous_to=LmjF.30.3290_mRNA;ortholog_cluster=OG0004349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1220743 1222020 1 + . ID=LTnewLM_300040700 LTnewLM_30 AUGUSTUS mRNA 1220743 1222020 1 + . ID=LTnewLM_300040700.1;Parent=LTnewLM_300040700 LTnewLM_30 AUGUSTUS CDS 1220743 1222020 1 + 0 ID=LTnewLM_300040700.1:CDS:1;Parent=LTnewLM_300040700.1 ### LTnewLM_30 . polypeptide 1220743 1222020 . + . ID=LTnewLM_300040700.1:pep;Derives_from=LTnewLM_300040700.1;orthologous_to=LmjF.30.3300_mRNA;ortholog_cluster=OG0004350;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/UBA/TS-N domain/XPC-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF00627|Pfam:PF09280;Ontology_term=GO:0006289,GO:0005515,GO:0043161,GO:0003684 LTnewLM_30 Pfam protein_match 1220743 1220934 . + . Parent=LTnewLM_300040700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_30 Pfam protein_match 1220752 1220955 . + . Parent=LTnewLM_300040700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1221241 1221336 . + . Parent=LTnewLM_300040700.1:pep;Name=PF00627;signature_desc=UBA/TS-N domain;Ontology_term=GO:0005515 LTnewLM_30 Pfam protein_match 1221517 1221678 . + . Parent=LTnewLM_300040700.1:pep;Name=PF09280;signature_desc=XPC-binding domain;Ontology_term=GO:0003684,GO:0006289,GO:0043161 ### LTnewLM_30 AUGUSTUS gene 1225011 1225400 1 + . ID=LTnewLM_300040800 LTnewLM_30 AUGUSTUS mRNA 1225011 1225400 1 + . ID=LTnewLM_300040800.1;Parent=LTnewLM_300040800 LTnewLM_30 AUGUSTUS CDS 1225011 1225400 1 + 0 ID=LTnewLM_300040800.1:CDS:1;Parent=LTnewLM_300040800.1 ### LTnewLM_30 . polypeptide 1225011 1225400 . + . ID=LTnewLM_300040800.1:pep;Derives_from=LTnewLM_300040800.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1226157 1227233 1 + . ID=LTnewLM_300040900 LTnewLM_30 AUGUSTUS mRNA 1226157 1227233 1 + . ID=LTnewLM_300040900.1;Parent=LTnewLM_300040900 LTnewLM_30 AUGUSTUS CDS 1226157 1227233 1 + 0 ID=LTnewLM_300040900.1:CDS:1;Parent=LTnewLM_300040900.1 ### LTnewLM_30 . polypeptide 1226157 1227233 . + . ID=LTnewLM_300040900.1:pep;Derives_from=LTnewLM_300040900.1;orthologous_to=LmjF.30.3310_mRNA;ortholog_cluster=OG0004351;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_30 Pfam protein_match 1226163 1226219 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226232 1226294 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226301 1226366 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226370 1226435 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226439 1226504 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226508 1226561 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226592 1226657 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226661 1226723 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226730 1226795 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226799 1226864 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226868 1226933 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1226937 1227002 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1227006 1227068 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1227075 1227110 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_30 Pfam protein_match 1227144 1227191 . + . Parent=LTnewLM_300040900.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_30 AUGUSTUS gene 1229628 1230710 1 + . ID=LTnewLM_300041000 LTnewLM_30 AUGUSTUS mRNA 1229628 1230710 1 + . ID=LTnewLM_300041000.1;Parent=LTnewLM_300041000 LTnewLM_30 AUGUSTUS CDS 1229628 1230710 1 + 0 ID=LTnewLM_300041000.1:CDS:1;Parent=LTnewLM_300041000.1 ### LTnewLM_30 . polypeptide 1229628 1230710 . + . ID=LTnewLM_300041000.1:pep;Derives_from=LTnewLM_300041000.1;orthologous_to=LmjF.30.3320_mRNA;ortholog_cluster=OG0004352;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1232955 1234277 1 + . ID=LTnewLM_300041100 LTnewLM_30 AUGUSTUS mRNA 1232955 1234277 1 + . ID=LTnewLM_300041100.1;Parent=LTnewLM_300041100 LTnewLM_30 AUGUSTUS CDS 1232955 1234277 1 + 0 ID=LTnewLM_300041100.1:CDS:1;Parent=LTnewLM_300041100.1 ### LTnewLM_30 . polypeptide 1232955 1234277 . + . ID=LTnewLM_300041100.1:pep;Derives_from=LTnewLM_300041100.1;orthologous_to=LmjF.30.3330_mRNA;ortholog_cluster=OG0004353;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1235256 1235828 1 + . ID=LTnewLM_300041200 LTnewLM_30 AUGUSTUS mRNA 1235256 1235828 1 + . ID=LTnewLM_300041200.1;Parent=LTnewLM_300041200 LTnewLM_30 AUGUSTUS CDS 1235256 1235828 1 + 0 ID=LTnewLM_300041200.1:CDS:1;Parent=LTnewLM_300041200.1 ### LTnewLM_30 . polypeptide 1235256 1235828 . + . ID=LTnewLM_300041200.1:pep;Derives_from=LTnewLM_300041200.1;orthologous_to=LTnewLM_210018400.1,LmjF.21.1050_mRNA,LmjF.30.3340_mRNA;ortholog_cluster=OG0000153;product=term%3DRibosomal protein L6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00347;Ontology_term=GO:0005840,GO:0019843,GO:0003735,GO:0006412 LTnewLM_30 Pfam protein_match 1235289 1235510 . + . Parent=LTnewLM_300041200.1:pep;Name=PF00347;signature_desc=Ribosomal protein L6;Ontology_term=GO:0003735,GO:0019843,GO:0006412,GO:0005840 LTnewLM_30 Pfam protein_match 1235547 1235783 . + . Parent=LTnewLM_300041200.1:pep;Name=PF00347;signature_desc=Ribosomal protein L6;Ontology_term=GO:0003735,GO:0019843,GO:0006412,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1236768 1237733 1 + . ID=LTnewLM_300041300 LTnewLM_30 AUGUSTUS mRNA 1236768 1237733 1 + . ID=LTnewLM_300041300.1;Parent=LTnewLM_300041300 LTnewLM_30 AUGUSTUS CDS 1236768 1237733 1 + 0 ID=LTnewLM_300041300.1:CDS:1;Parent=LTnewLM_300041300.1 ### LTnewLM_30 . polypeptide 1236768 1237733 . + . ID=LTnewLM_300041300.1:pep;Derives_from=LTnewLM_300041300.1;orthologous_to=LmjF.30.3350_mRNA;ortholog_cluster=OG0004354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1238607 1240784 1 + . ID=LTnewLM_300041400 LTnewLM_30 AUGUSTUS mRNA 1238607 1240784 1 + . ID=LTnewLM_300041400.1;Parent=LTnewLM_300041400 LTnewLM_30 AUGUSTUS CDS 1238607 1240784 1 + 0 ID=LTnewLM_300041400.1:CDS:1;Parent=LTnewLM_300041400.1 ### LTnewLM_30 . polypeptide 1238607 1240784 . + . ID=LTnewLM_300041400.1:pep;Derives_from=LTnewLM_300041400.1;orthologous_to=LmjF.30.3360_mRNA;ortholog_cluster=OG0004355;product=term%3DEF hand/EF-hand domain pair/EF-hand domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13202|Pfam:PF13499|Pfam:PF13405;Ontology_term=GO:0005509 LTnewLM_30 Pfam protein_match 1238706 1238768 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_30 Pfam protein_match 1238988 1239197 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_30 Pfam protein_match 1239003 1239053 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_30 Pfam protein_match 1239288 1239485 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_30 Pfam protein_match 1239294 1239356 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_30 Pfam protein_match 1239294 1239374 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_30 Pfam protein_match 1239603 1239671 . + . Parent=LTnewLM_300041400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_30 AUGUSTUS gene 1244527 1246503 1 + . ID=LTnewLM_300041500 LTnewLM_30 AUGUSTUS mRNA 1244527 1246503 1 + . ID=LTnewLM_300041500.1;Parent=LTnewLM_300041500 LTnewLM_30 AUGUSTUS CDS 1244527 1246503 1 + 0 ID=LTnewLM_300041500.1:CDS:1;Parent=LTnewLM_300041500.1 ### LTnewLM_30 . polypeptide 1244527 1246503 . + . ID=LTnewLM_300041500.1:pep;Derives_from=LTnewLM_300041500.1;orthologous_to=LmjF.30.3370_mRNA;ortholog_cluster=OG0004356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1254911 1256494 1 + . ID=LTnewLM_300041600 LTnewLM_30 AUGUSTUS mRNA 1254911 1256494 1 + . ID=LTnewLM_300041600.1;Parent=LTnewLM_300041600 LTnewLM_30 AUGUSTUS CDS 1254911 1256494 1 + 0 ID=LTnewLM_300041600.1:CDS:1;Parent=LTnewLM_300041600.1 ### LTnewLM_30 . polypeptide 1254911 1256494 . + . ID=LTnewLM_300041600.1:pep;Derives_from=LTnewLM_300041600.1;orthologous_to=LmjF.30.3380_mRNA;ortholog_cluster=OG0004357;product=term%3DPAS fold/Phosphoglycerate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00989|Pfam:PF00162;Ontology_term=GO:0006096,GO:0004618,GO:0006355 LTnewLM_30 Pfam protein_match 1254938 1255171 . + . Parent=LTnewLM_300041600.1:pep;Name=PF00989;signature_desc=PAS fold;Ontology_term=GO:0006355 LTnewLM_30 Pfam protein_match 1255280 1256437 . + . Parent=LTnewLM_300041600.1:pep;Name=PF00162;signature_desc=Phosphoglycerate kinase;Ontology_term=GO:0004618,GO:0006096 ### LTnewLM_30 AUGUSTUS gene 1259645 1262572 1 + . ID=LTnewLM_300041700 LTnewLM_30 AUGUSTUS mRNA 1259645 1262572 1 + . ID=LTnewLM_300041700.1;Parent=LTnewLM_300041700 LTnewLM_30 AUGUSTUS CDS 1259645 1262572 1 + 0 ID=LTnewLM_300041700.1:CDS:1;Parent=LTnewLM_300041700.1 ### LTnewLM_30 . polypeptide 1259645 1262572 . + . ID=LTnewLM_300041700.1:pep;Derives_from=LTnewLM_300041700.1;orthologous_to=LmjF.30.3390_mRNA;ortholog_cluster=OG0004358;product=term%3DCse1/CAS/CSE protein%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08506|Pfam:PF03378;Ontology_term=GO:0006886,GO:0005515 LTnewLM_30 Pfam protein_match 1260161 1261231 . + . Parent=LTnewLM_300041700.1:pep;Name=PF08506;signature_desc=Cse1;Ontology_term=GO:0006886 LTnewLM_30 Pfam protein_match 1261295 1262548 . + . Parent=LTnewLM_300041700.1:pep;Name=PF03378;signature_desc=CAS/CSE protein%2C C-terminus;Ontology_term=GO:0005515 ### LTnewLM_30 AUGUSTUS gene 1265110 1265613 1 + . ID=LTnewLM_300041800 LTnewLM_30 AUGUSTUS mRNA 1265110 1265613 1 + . ID=LTnewLM_300041800.1;Parent=LTnewLM_300041800 LTnewLM_30 AUGUSTUS CDS 1265110 1265613 1 + 0 ID=LTnewLM_300041800.1:CDS:1;Parent=LTnewLM_300041800.1 ### LTnewLM_30 . polypeptide 1265110 1265613 . + . ID=LTnewLM_300041800.1:pep;Derives_from=LTnewLM_300041800.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1266520 1267224 1 + . ID=LTnewLM_300041900 LTnewLM_30 AUGUSTUS mRNA 1266520 1267224 1 + . ID=LTnewLM_300041900.1;Parent=LTnewLM_300041900 LTnewLM_30 AUGUSTUS CDS 1266520 1267224 1 + 0 ID=LTnewLM_300041900.1:CDS:1;Parent=LTnewLM_300041900.1 ### LTnewLM_30 . polypeptide 1266520 1267224 . + . ID=LTnewLM_300041900.1:pep;Derives_from=LTnewLM_300041900.1;orthologous_to=LmjF.30.3400_mRNA;ortholog_cluster=OG0004359;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1269432 1271285 1 + . ID=LTnewLM_300042000 LTnewLM_30 AUGUSTUS mRNA 1269432 1271285 1 + . ID=LTnewLM_300042000.1;Parent=LTnewLM_300042000 LTnewLM_30 AUGUSTUS CDS 1269432 1271285 1 + 0 ID=LTnewLM_300042000.1:CDS:1;Parent=LTnewLM_300042000.1 ### LTnewLM_30 . polypeptide 1269432 1271285 . + . ID=LTnewLM_300042000.1:pep;Derives_from=LTnewLM_300042000.1;orthologous_to=LmjF.30.3410_mRNA;ortholog_cluster=OG0004360;product=term%3DDynein heavy chain region D6 P-loop domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03028;Ontology_term=GO:0030286,GO:0007018,GO:0003777 LTnewLM_30 Pfam protein_match 1269819 1270151 . + . Parent=LTnewLM_300042000.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 ### LTnewLM_30 Liftoff gene 1273353 1276243 . + . ID=LTnewLM_300042100;coverage=0.999;sequence_ID=0.945;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.30.3420_0 LTnewLM_30 Liftoff mRNA 1273353 1276243 . + . ID=LTnewLM_300042100.1;Parent=LTnewLM_300042100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 1273353 1273621 . + . ID=LTnewLM_300042100:five_prime_UTR;Parent=LTnewLM_300042100.1;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1273622 1276243 . + 0 ID=LTnewLM_300042100.1:CDS:1;Parent=LTnewLM_300042100.1;extra_copy_number=0 LTnewLM_30 Liftoff mRNA 1273638 1276243 . + . ID=LTnewLM_300042100.2;Parent=LTnewLM_300042100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_30 Liftoff five_prime_UTR 1273638 1273717 . + . ID=LTnewLM_300042100:five_prime_UTR.1;Parent=LTnewLM_300042100.2;extra_copy_number=0 LTnewLM_30 Liftoff CDS 1273718 1276243 . + 0 ID=LTnewLM_300042100.2:CDS:1;Parent=LTnewLM_300042100.2;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1273622 1276243 . + . ID=LTnewLM_300042100.1:pep;Derives_from=LTnewLM_300042100.1;orthologous_to=LTnewLM_300042100.2,LmjF.30.3420.1_mRNA,LmjF.30.3420.2_mRNA;ortholog_cluster=OG0000213;product=term%3DT-complex protein 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05794 LTnewLM_30 Pfam protein_match 1274921 1276201 . + . Parent=LTnewLM_300042100.1:pep;Name=PF05794;signature_desc=T-complex protein 11 ### LTnewLM_30 . polypeptide 1273718 1276243 . + . ID=LTnewLM_300042100.2:pep;Derives_from=LTnewLM_300042100.2;orthologous_to=LTnewLM_300042100.1,LmjF.30.3420.1_mRNA,LmjF.30.3420.2_mRNA;ortholog_cluster=OG0000213;product=term%3DT-complex protein 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05794 LTnewLM_30 Pfam protein_match 1274921 1276201 . + . Parent=LTnewLM_300042100.2:pep;Name=PF05794;signature_desc=T-complex protein 11 ### LTnewLM_30 AUGUSTUS gene 1278309 1280708 1 + . ID=LTnewLM_300042200 LTnewLM_30 AUGUSTUS mRNA 1278309 1280708 1 + . ID=LTnewLM_300042200.1;Parent=LTnewLM_300042200 LTnewLM_30 AUGUSTUS CDS 1278309 1280708 1 + 0 ID=LTnewLM_300042200.1:CDS:1;Parent=LTnewLM_300042200.1 ### LTnewLM_30 . polypeptide 1278309 1280708 . + . ID=LTnewLM_300042200.1:pep;Derives_from=LTnewLM_300042200.1;orthologous_to=LmjF.30.3430_mRNA;ortholog_cluster=OG0004361;product=term%3DTemperature dependent protein affecting M2 dsRNA replication%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12247|Pfam:PF12246 LTnewLM_30 Pfam protein_match 1279314 1279559 . + . Parent=LTnewLM_300042200.1:pep;Name=PF12247;signature_desc=Temperature dependent protein affecting M2 dsRNA replication LTnewLM_30 Pfam protein_match 1279794 1280456 . + . Parent=LTnewLM_300042200.1:pep;Name=PF12246;signature_desc=Temperature dependent protein affecting M2 dsRNA replication ### LTnewLM_30 AUGUSTUS gene 1286115 1288418 1 + . ID=LTnewLM_300042300 LTnewLM_30 AUGUSTUS mRNA 1286115 1288418 1 + . ID=LTnewLM_300042300.1;Parent=LTnewLM_300042300 LTnewLM_30 AUGUSTUS CDS 1286115 1288418 1 + 0 ID=LTnewLM_300042300.1:CDS:1;Parent=LTnewLM_300042300.1 ### LTnewLM_30 . polypeptide 1286115 1288418 . + . ID=LTnewLM_300042300.1:pep;Derives_from=LTnewLM_300042300.1;orthologous_to=LmjF.30.3440_mRNA;ortholog_cluster=OG0004362;product=term%3DDNA ligase N terminus/ATP dependent DNA ligase domain/ATP dependent DNA ligase C terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04675|Pfam:PF01068|Pfam:PF04679;Ontology_term=GO:0003910,GO:0005524,GO:0006310,GO:0006281,GO:0003677 LTnewLM_30 Pfam protein_match 1286529 1287050 . + . Parent=LTnewLM_300042300.1:pep;Name=PF04675;signature_desc=DNA ligase N terminus;Ontology_term=GO:0003677,GO:0003910,GO:0006281,GO:0006310 LTnewLM_30 Pfam protein_match 1287300 1287914 . + . Parent=LTnewLM_300042300.1:pep;Name=PF01068;signature_desc=ATP dependent DNA ligase domain;Ontology_term=GO:0003910,GO:0005524,GO:0006281,GO:0006310 LTnewLM_30 Pfam protein_match 1287990 1288319 . + . Parent=LTnewLM_300042300.1:pep;Name=PF04679;signature_desc=ATP dependent DNA ligase C terminal region;Ontology_term=GO:0003910,GO:0006281,GO:0006310 ### LTnewLM_30 . pseudogene 1288993 1289552 . + . ID=LTnewLM_300042400:pseudogene;coverage=0.992;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.30.3445_0;has_internal_stop=true LTnewLM_30 . pseudogenic_transcript 1288993 1289552 . + . ID=LTnewLM_300042400.1;Parent=LTnewLM_300042400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_30 . pseudogenic_exon 1288993 1289552 . + . ID=LTnewLM_300042400.1:pseudogenic_exon:1;Parent=LTnewLM_300042400.1;extra_copy_number=0 ### LTnewLM_30 . polypeptide 1288993 1289552 . + . ID=LTnewLM_300042400.1:pep;Derives_from=LTnewLM_300042400.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1290645 1291850 1 + . ID=LTnewLM_300042500 LTnewLM_30 AUGUSTUS mRNA 1290645 1291850 1 + . ID=LTnewLM_300042500.1;Parent=LTnewLM_300042500 LTnewLM_30 AUGUSTUS CDS 1290645 1291850 1 + 0 ID=LTnewLM_300042500.1:CDS:1;Parent=LTnewLM_300042500.1 ### LTnewLM_30 . polypeptide 1290645 1291850 . + . ID=LTnewLM_300042500.1:pep;Derives_from=LTnewLM_300042500.1;orthologous_to=LmjF.30.3450_mRNA;ortholog_cluster=OG0004363;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432 LTnewLM_30 Pfam protein_match 1290840 1290983 . + . Parent=LTnewLM_300042500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_30 AUGUSTUS gene 1292775 1293209 1 + . ID=LTnewLM_300042600 LTnewLM_30 AUGUSTUS mRNA 1292775 1293209 1 + . ID=LTnewLM_300042600.1;Parent=LTnewLM_300042600 LTnewLM_30 AUGUSTUS CDS 1292775 1293209 1 + 0 ID=LTnewLM_300042600.1:CDS:1;Parent=LTnewLM_300042600.1 ### LTnewLM_30 . polypeptide 1292775 1293209 . + . ID=LTnewLM_300042600.1:pep;Derives_from=LTnewLM_300042600.1;orthologous_to=LmjF.30.3460_mRNA;ortholog_cluster=OG0004364;product=term%3DYippee zinc-binding/DNA-binding /Mis18%2C centromere assembly%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03226 LTnewLM_30 Pfam protein_match 1292829 1293119 . + . Parent=LTnewLM_300042600.1:pep;Name=PF03226;signature_desc=Yippee zinc-binding/DNA-binding /Mis18%2C centromere assembly ### LTnewLM_30 AUGUSTUS gene 1294046 1295227 1 + . ID=LTnewLM_300042700 LTnewLM_30 AUGUSTUS mRNA 1294046 1295227 1 + . ID=LTnewLM_300042700.1;Parent=LTnewLM_300042700 LTnewLM_30 AUGUSTUS CDS 1294046 1295227 1 + 0 ID=LTnewLM_300042700.1:CDS:1;Parent=LTnewLM_300042700.1 ### LTnewLM_30 . polypeptide 1294046 1295227 . + . ID=LTnewLM_300042700.1:pep;Derives_from=LTnewLM_300042700.1;orthologous_to=LmjF.30.3470_mRNA;ortholog_cluster=OG0004365;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF17667;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1294148 1294606 . + . Parent=LTnewLM_300042700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 1294148 1294786 . + . Parent=LTnewLM_300042700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1294469 1294741 . + . Parent=LTnewLM_300042700.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_30 AUGUSTUS gene 1301325 1302071 1 + . ID=LTnewLM_300042800 LTnewLM_30 AUGUSTUS mRNA 1301325 1302071 1 + . ID=LTnewLM_300042800.1;Parent=LTnewLM_300042800 LTnewLM_30 AUGUSTUS CDS 1301325 1302071 1 + 0 ID=LTnewLM_300042800.1:CDS:1;Parent=LTnewLM_300042800.1 ### LTnewLM_30 . polypeptide 1301325 1302071 . + . ID=LTnewLM_300042800.1:pep;Derives_from=LTnewLM_300042800.1;orthologous_to=LmjF.30.3480_mRNA;ortholog_cluster=OG0004366;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1304303 1306084 1 + . ID=LTnewLM_300042900 LTnewLM_30 AUGUSTUS mRNA 1304303 1306084 1 + . ID=LTnewLM_300042900.1;Parent=LTnewLM_300042900 LTnewLM_30 AUGUSTUS CDS 1304303 1306084 1 + 0 ID=LTnewLM_300042900.1:CDS:1;Parent=LTnewLM_300042900.1 ### LTnewLM_30 . polypeptide 1304303 1306084 . + . ID=LTnewLM_300042900.1:pep;Derives_from=LTnewLM_300042900.1;orthologous_to=LTnewLM_300043100.1,LTnewLM_350046300.1,LmjF.30.3490_mRNA,LmjF.30.3510_mRNA,LmjF.35.3970_mRNA;ortholog_cluster=OG0000064;product=term%3DMIZ/SP-RING zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02891;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 1305746 1305889 . + . Parent=LTnewLM_300042900.1:pep;Name=PF02891;signature_desc=MIZ/SP-RING zinc finger;Ontology_term=GO:0008270 ### LTnewLM_30 AUGUSTUS gene 1306774 1307952 1 + . ID=LTnewLM_300043000 LTnewLM_30 AUGUSTUS mRNA 1306774 1307952 1 + . ID=LTnewLM_300043000.1;Parent=LTnewLM_300043000 LTnewLM_30 AUGUSTUS CDS 1306774 1307952 1 + 0 ID=LTnewLM_300043000.1:CDS:1;Parent=LTnewLM_300043000.1 ### LTnewLM_30 . polypeptide 1306774 1307952 . + . ID=LTnewLM_300043000.1:pep;Derives_from=LTnewLM_300043000.1;orthologous_to=LTnewLM_300043200.1,LmjF.30.3500_mRNA,LmjF.30.3520_mRNA;ortholog_cluster=OG0000214;product=term%3DS-adenosylmethionine synthetase%2C N-terminal domain/S-adenosylmethionine synthetase%2C central domain/S-adenosylmethionine synthetase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00438|Pfam:PF02772|Pfam:PF02773;Ontology_term=GO:0006556,GO:0004478 LTnewLM_30 Pfam protein_match 1306789 1307079 . + . Parent=LTnewLM_300043000.1:pep;Name=PF00438;signature_desc=S-adenosylmethionine synthetase%2C N-terminal domain;Ontology_term=GO:0004478,GO:0006556 LTnewLM_30 Pfam protein_match 1307122 1307493 . + . Parent=LTnewLM_300043000.1:pep;Name=PF02772;signature_desc=S-adenosylmethionine synthetase%2C central domain;Ontology_term=GO:0004478,GO:0006556 LTnewLM_30 Pfam protein_match 1307503 1307925 . + . Parent=LTnewLM_300043000.1:pep;Name=PF02773;signature_desc=S-adenosylmethionine synthetase%2C C-terminal domain;Ontology_term=GO:0004478,GO:0006556 ### LTnewLM_30 AUGUSTUS gene 1309425 1311203 1 + . ID=LTnewLM_300043100 LTnewLM_30 AUGUSTUS mRNA 1309425 1311203 1 + . ID=LTnewLM_300043100.1;Parent=LTnewLM_300043100 LTnewLM_30 AUGUSTUS CDS 1309425 1311203 1 + 0 ID=LTnewLM_300043100.1:CDS:1;Parent=LTnewLM_300043100.1 ### LTnewLM_30 . polypeptide 1309425 1311203 . + . ID=LTnewLM_300043100.1:pep;Derives_from=LTnewLM_300043100.1;orthologous_to=LTnewLM_300042900.1,LTnewLM_350046300.1,LmjF.30.3490_mRNA,LmjF.30.3510_mRNA,LmjF.35.3970_mRNA;ortholog_cluster=OG0000064;product=term%3DMIZ/SP-RING zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02891;Ontology_term=GO:0008270 LTnewLM_30 Pfam protein_match 1310865 1311008 . + . Parent=LTnewLM_300043100.1:pep;Name=PF02891;signature_desc=MIZ/SP-RING zinc finger;Ontology_term=GO:0008270 ### LTnewLM_30 AUGUSTUS gene 1311897 1313075 1 + . ID=LTnewLM_300043200 LTnewLM_30 AUGUSTUS mRNA 1311897 1313075 1 + . ID=LTnewLM_300043200.1;Parent=LTnewLM_300043200 LTnewLM_30 AUGUSTUS CDS 1311897 1313075 1 + 0 ID=LTnewLM_300043200.1:CDS:1;Parent=LTnewLM_300043200.1 ### LTnewLM_30 . polypeptide 1311897 1313075 . + . ID=LTnewLM_300043200.1:pep;Derives_from=LTnewLM_300043200.1;orthologous_to=LTnewLM_300043000.1,LmjF.30.3500_mRNA,LmjF.30.3520_mRNA;ortholog_cluster=OG0000214;product=term%3DS-adenosylmethionine synthetase%2C N-terminal domain/S-adenosylmethionine synthetase%2C central domain/S-adenosylmethionine synthetase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00438|Pfam:PF02772|Pfam:PF02773;Ontology_term=GO:0006556,GO:0004478 LTnewLM_30 Pfam protein_match 1311912 1312202 . + . Parent=LTnewLM_300043200.1:pep;Name=PF00438;signature_desc=S-adenosylmethionine synthetase%2C N-terminal domain;Ontology_term=GO:0004478,GO:0006556 LTnewLM_30 Pfam protein_match 1312245 1312616 . + . Parent=LTnewLM_300043200.1:pep;Name=PF02772;signature_desc=S-adenosylmethionine synthetase%2C central domain;Ontology_term=GO:0004478,GO:0006556 LTnewLM_30 Pfam protein_match 1312626 1313048 . + . Parent=LTnewLM_300043200.1:pep;Name=PF02773;signature_desc=S-adenosylmethionine synthetase%2C C-terminal domain;Ontology_term=GO:0004478,GO:0006556 ### LTnewLM_30 AUGUSTUS gene 1314697 1315440 1 + . ID=LTnewLM_300043300 LTnewLM_30 AUGUSTUS mRNA 1314697 1315440 1 + . ID=LTnewLM_300043300.1;Parent=LTnewLM_300043300 LTnewLM_30 AUGUSTUS CDS 1314697 1315440 1 + 0 ID=LTnewLM_300043300.1:CDS:1;Parent=LTnewLM_300043300.1 ### LTnewLM_30 . polypeptide 1314697 1315440 . + . ID=LTnewLM_300043300.1:pep;Derives_from=LTnewLM_300043300.1;orthologous_to=LmjF.30.3530_mRNA;ortholog_cluster=OG0004367;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_30 Pfam protein_match 1314940 1315197 . + . Parent=LTnewLM_300043300.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_30 AUGUSTUS gene 1316949 1318334 1 + . ID=LTnewLM_300043400 LTnewLM_30 AUGUSTUS mRNA 1316949 1318334 1 + . ID=LTnewLM_300043400.1;Parent=LTnewLM_300043400 LTnewLM_30 AUGUSTUS CDS 1316949 1318334 1 + 0 ID=LTnewLM_300043400.1:CDS:1;Parent=LTnewLM_300043400.1 ### LTnewLM_30 . polypeptide 1316949 1318334 . + . ID=LTnewLM_300043400.1:pep;Derives_from=LTnewLM_300043400.1;orthologous_to=LmjF.30.3540_mRNA;ortholog_cluster=OG0004368;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1319438 1320964 1 + . ID=LTnewLM_300043500 LTnewLM_30 AUGUSTUS mRNA 1319438 1320964 1 + . ID=LTnewLM_300043500.1;Parent=LTnewLM_300043500 LTnewLM_30 AUGUSTUS CDS 1319438 1320964 1 + 0 ID=LTnewLM_300043500.1:CDS:1;Parent=LTnewLM_300043500.1 ### LTnewLM_30 . polypeptide 1319438 1320964 . + . ID=LTnewLM_300043500.1:pep;Derives_from=LTnewLM_300043500.1;orthologous_to=LmjF.30.3550_mRNA;ortholog_cluster=OG0004369;product=term%3DCytochrome P450%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00067;Ontology_term=GO:0055114,GO:0005506,GO:0016705,GO:0020037 LTnewLM_30 Pfam protein_match 1319579 1320856 . + . Parent=LTnewLM_300043500.1:pep;Name=PF00067;signature_desc=Cytochrome P450;Ontology_term=GO:0005506,GO:0016705,GO:0020037,GO:0055114 ### LTnewLM_30 AUGUSTUS gene 1322984 1323472 1 + . ID=LTnewLM_300043600 LTnewLM_30 AUGUSTUS mRNA 1322984 1323472 1 + . ID=LTnewLM_300043600.1;Parent=LTnewLM_300043600 LTnewLM_30 AUGUSTUS CDS 1322984 1323472 1 + 0 ID=LTnewLM_300043600.1:CDS:1;Parent=LTnewLM_300043600.1 ### LTnewLM_30 . polypeptide 1322984 1323472 . + . ID=LTnewLM_300043600.1:pep;Derives_from=LTnewLM_300043600.1;orthologous_to=LmjF.30.3560_mRNA;ortholog_cluster=OG0004370;product=term%3DMago nashi protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02792;Ontology_term=GO:0005634 LTnewLM_30 Pfam protein_match 1323044 1323466 . + . Parent=LTnewLM_300043600.1:pep;Name=PF02792;signature_desc=Mago nashi protein;Ontology_term=GO:0005634 ### LTnewLM_30 AUGUSTUS gene 1324532 1325332 1 + . ID=LTnewLM_300043700 LTnewLM_30 AUGUSTUS mRNA 1324532 1325332 1 + . ID=LTnewLM_300043700.1;Parent=LTnewLM_300043700 LTnewLM_30 AUGUSTUS CDS 1324532 1325332 1 + 0 ID=LTnewLM_300043700.1:CDS:1;Parent=LTnewLM_300043700.1 ### LTnewLM_30 . polypeptide 1324532 1325332 . + . ID=LTnewLM_300043700.1:pep;Derives_from=LTnewLM_300043700.1;orthologous_to=LmjF.30.3570_mRNA;ortholog_cluster=OG0004371;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_30 Pfam protein_match 1324712 1324783 . + . Parent=LTnewLM_300043700.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_30 AUGUSTUS gene 1327783 1330029 1 + . ID=LTnewLM_300043800 LTnewLM_30 AUGUSTUS mRNA 1327783 1330029 1 + . ID=LTnewLM_300043800.1;Parent=LTnewLM_300043800 LTnewLM_30 AUGUSTUS CDS 1327783 1330029 1 + 0 ID=LTnewLM_300043800.1:CDS:1;Parent=LTnewLM_300043800.1 ### LTnewLM_30 . polypeptide 1327783 1330029 . + . ID=LTnewLM_300043800.1:pep;Derives_from=LTnewLM_300043800.1;orthologous_to=LmjF.30.3580_mRNA;ortholog_cluster=OG0004372;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_30 Pfam protein_match 1328263 1328688 . + . Parent=LTnewLM_300043800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_30 Pfam protein_match 1328269 1328700 . + . Parent=LTnewLM_300043800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_30 Pfam protein_match 1328959 1329432 . + . Parent=LTnewLM_300043800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_30 . pseudogene 1330827 1331374 985 + . ID=LTnewLM_300043900:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.30.3590:mRNA 1 183;original_prot_length=195 LTnewLM_30 . pseudogenic_transcript 1330827 1331374 . + . ID=LTnewLM_300043900.1;Parent=LTnewLM_300043900:pseudogene LTnewLM_30 . pseudogenic_exon 1330827 1331138 . + . ID=LTnewLM_300043900.1:pseudogenic_exon:1;Parent=LTnewLM_300043900.1 LTnewLM_30 . pseudogenic_exon 1331141 1331374 . + . ID=LTnewLM_300043900.1:pseudogenic_exon:2;Parent=LTnewLM_300043900.1 ### LTnewLM_30 . polypeptide 1330827 1331374 . + . ID=LTnewLM_300043900.1:pep;Derives_from=LTnewLM_300043900.1;orthologous_to=LmjF.30.3590_mRNA;ortholog_cluster=OG0007594;product=term%3DRibosomal protein S11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00411;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_30 Pfam protein_match 1330890 1331147 . + . Parent=LTnewLM_300043900.1:pep;Name=PF00411;signature_desc=Ribosomal protein S11;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1332133 1332678 1 + . ID=LTnewLM_300044000 LTnewLM_30 AUGUSTUS mRNA 1332133 1332678 1 + . ID=LTnewLM_300044000.1;Parent=LTnewLM_300044000 LTnewLM_30 AUGUSTUS CDS 1332133 1332678 1 + 0 ID=LTnewLM_300044000.1:CDS:1;Parent=LTnewLM_300044000.1 ### LTnewLM_30 . polypeptide 1332133 1332678 . + . ID=LTnewLM_300044000.1:pep;Derives_from=LTnewLM_300044000.1;orthologous_to=LmjF.30.3600_mRNA;ortholog_cluster=OG0004373;product=term%3DATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02823;Ontology_term=GO:0046961,GO:0046933,GO:0045261,GO:0015986 LTnewLM_30 Pfam protein_match 1332277 1332489 . + . Parent=LTnewLM_300044000.1:pep;Name=PF02823;signature_desc=ATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain;Ontology_term=GO:0046933,GO:0046961,GO:0015986,GO:0045261 ### LTnewLM_30 AUGUSTUS gene 1334713 1335879 1 + . ID=LTnewLM_300044100 LTnewLM_30 AUGUSTUS mRNA 1334713 1335879 1 + . ID=LTnewLM_300044100.1;Parent=LTnewLM_300044100 LTnewLM_30 AUGUSTUS CDS 1334713 1335879 1 + 0 ID=LTnewLM_300044100.1:CDS:1;Parent=LTnewLM_300044100.1 ### LTnewLM_30 . polypeptide 1334713 1335879 . + . ID=LTnewLM_300044100.1:pep;Derives_from=LTnewLM_300044100.1;orthologous_to=LmjF.30.3610_mRNA;ortholog_cluster=OG0004374;product=term%3DCDK5 regulatory subunit-associated protein 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05600 LTnewLM_30 Pfam protein_match 1334803 1335402 . + . Parent=LTnewLM_300044100.1:pep;Name=PF05600;signature_desc=CDK5 regulatory subunit-associated protein 3 ### LTnewLM_30 AUGUSTUS gene 1336791 1337903 1 + . ID=LTnewLM_300044200 LTnewLM_30 AUGUSTUS mRNA 1336791 1337903 1 + . ID=LTnewLM_300044200.1;Parent=LTnewLM_300044200 LTnewLM_30 AUGUSTUS CDS 1336791 1337903 1 + 0 ID=LTnewLM_300044200.1:CDS:1;Parent=LTnewLM_300044200.1 ### LTnewLM_30 . polypeptide 1336791 1337903 . + . ID=LTnewLM_300044200.1:pep;Derives_from=LTnewLM_300044200.1;orthologous_to=LmjF.30.3620_mRNA;ortholog_cluster=OG0004375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1339815 1340576 1 + . ID=LTnewLM_300044300 LTnewLM_30 AUGUSTUS mRNA 1339815 1340576 1 + . ID=LTnewLM_300044300.1;Parent=LTnewLM_300044300 LTnewLM_30 AUGUSTUS CDS 1339815 1340576 1 + 0 ID=LTnewLM_300044300.1:CDS:1;Parent=LTnewLM_300044300.1 ### LTnewLM_30 . polypeptide 1339815 1340576 . + . ID=LTnewLM_300044300.1:pep;Derives_from=LTnewLM_300044300.1;orthologous_to=LmjF.30.3630_mRNA;ortholog_cluster=OG0004376;product=term%3DCyclin/Cyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613|Pfam:PF00134;Ontology_term=GO:0000079,GO:0019901 LTnewLM_30 Pfam protein_match 1339962 1340270 . + . Parent=LTnewLM_300044300.1:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 LTnewLM_30 Pfam protein_match 1340034 1340276 . + . Parent=LTnewLM_300044300.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_30 AUGUSTUS gene 1344755 1346422 1 + . ID=LTnewLM_300044400 LTnewLM_30 AUGUSTUS mRNA 1344755 1346422 1 + . ID=LTnewLM_300044400.1;Parent=LTnewLM_300044400 LTnewLM_30 AUGUSTUS CDS 1344755 1346422 1 + 0 ID=LTnewLM_300044400.1:CDS:1;Parent=LTnewLM_300044400.1 ### LTnewLM_30 . polypeptide 1344755 1346422 . + . ID=LTnewLM_300044400.1:pep;Derives_from=LTnewLM_300044400.1;orthologous_to=LmjF.30.3640_mRNA;ortholog_cluster=OG0004377;product=term%3DLeucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580 LTnewLM_30 Pfam protein_match 1345061 1345447 . + . Parent=LTnewLM_300044400.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_30 AUGUSTUS gene 1347366 1347980 1 + . ID=LTnewLM_300044500 LTnewLM_30 AUGUSTUS mRNA 1347366 1347980 1 + . ID=LTnewLM_300044500.1;Parent=LTnewLM_300044500 LTnewLM_30 AUGUSTUS CDS 1347366 1347980 1 + 0 ID=LTnewLM_300044500.1:CDS:1;Parent=LTnewLM_300044500.1 ### LTnewLM_30 . polypeptide 1347366 1347980 . + . ID=LTnewLM_300044500.1:pep;Derives_from=LTnewLM_300044500.1;orthologous_to=LTnewLM_350024300.1,LmjF.30.3650_mRNA,LmjF.35.1910_mRNA;ortholog_cluster=OG0000215;product=term%3DRibosomal L15%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00827;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_30 Pfam protein_match 1347369 1347932 . + . Parent=LTnewLM_300044500.1:pep;Name=PF00827;signature_desc=Ribosomal L15;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1348835 1349509 1 + . ID=LTnewLM_300044600 LTnewLM_30 AUGUSTUS mRNA 1348835 1349509 1 + . ID=LTnewLM_300044600.1;Parent=LTnewLM_300044600 LTnewLM_30 AUGUSTUS CDS 1348835 1349509 1 + 0 ID=LTnewLM_300044600.1:CDS:1;Parent=LTnewLM_300044600.1 ### LTnewLM_30 . polypeptide 1348835 1349509 . + . ID=LTnewLM_300044600.1:pep;Derives_from=LTnewLM_300044600.1;orthologous_to=LmjF.30.3660_mRNA;ortholog_cluster=OG0004378;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_30 Pfam protein_match 1349042 1349218 . + . Parent=LTnewLM_300044600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 LTnewLM_30 Pfam protein_match 1349306 1349482 . + . Parent=LTnewLM_300044600.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_30 AUGUSTUS gene 1350551 1350985 1 + . ID=LTnewLM_300044700 LTnewLM_30 AUGUSTUS mRNA 1350551 1350985 1 + . ID=LTnewLM_300044700.1;Parent=LTnewLM_300044700 LTnewLM_30 AUGUSTUS CDS 1350551 1350985 1 + 0 ID=LTnewLM_300044700.1:CDS:1;Parent=LTnewLM_300044700.1 ### LTnewLM_30 . polypeptide 1350551 1350985 . + . ID=LTnewLM_300044700.1:pep;Derives_from=LTnewLM_300044700.1;orthologous_to=LmjF.30.3670_mRNA;ortholog_cluster=OG0004379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1352048 1353376 1 + . ID=LTnewLM_300044800 LTnewLM_30 AUGUSTUS mRNA 1352048 1353376 1 + . ID=LTnewLM_300044800.1;Parent=LTnewLM_300044800 LTnewLM_30 AUGUSTUS CDS 1352048 1353376 1 + 0 ID=LTnewLM_300044800.1:CDS:1;Parent=LTnewLM_300044800.1 ### LTnewLM_30 . polypeptide 1352048 1353376 . + . ID=LTnewLM_300044800.1:pep;Derives_from=LTnewLM_300044800.1;orthologous_to=LmjF.30.3680_mRNA;ortholog_cluster=OG0004380;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1355027 1356772 1 + . ID=LTnewLM_300044900 LTnewLM_30 AUGUSTUS mRNA 1355027 1356772 1 + . ID=LTnewLM_300044900.1;Parent=LTnewLM_300044900 LTnewLM_30 AUGUSTUS CDS 1355027 1356772 1 + 0 ID=LTnewLM_300044900.1:CDS:1;Parent=LTnewLM_300044900.1 ### LTnewLM_30 . polypeptide 1355027 1356772 . + . ID=LTnewLM_300044900.1:pep;Derives_from=LTnewLM_300044900.1;orthologous_to=LmjF.30.3690_mRNA;ortholog_cluster=OG0004381;product=term%3DIml2/Tetratricopeptide repeat protein 39%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10300 LTnewLM_30 Pfam protein_match 1355117 1356310 . + . Parent=LTnewLM_300044900.1:pep;Name=PF10300;signature_desc=Iml2/Tetratricopeptide repeat protein 39 ### LTnewLM_30 AUGUSTUS gene 1358370 1358786 1 + . ID=LTnewLM_300045000 LTnewLM_30 AUGUSTUS mRNA 1358370 1358786 1 + . ID=LTnewLM_300045000.1;Parent=LTnewLM_300045000 LTnewLM_30 AUGUSTUS CDS 1358370 1358786 1 + 0 ID=LTnewLM_300045000.1:CDS:1;Parent=LTnewLM_300045000.1 ### LTnewLM_30 . polypeptide 1358370 1358786 . + . ID=LTnewLM_300045000.1:pep;Derives_from=LTnewLM_300045000.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1361804 1364377 1 + . ID=LTnewLM_300045100 LTnewLM_30 AUGUSTUS mRNA 1361804 1364377 1 + . ID=LTnewLM_300045100.1;Parent=LTnewLM_300045100 LTnewLM_30 AUGUSTUS CDS 1361804 1364377 1 + 0 ID=LTnewLM_300045100.1:CDS:1;Parent=LTnewLM_300045100.1 ### LTnewLM_30 . polypeptide 1361804 1364377 . + . ID=LTnewLM_300045100.1:pep;Derives_from=LTnewLM_300045100.1;orthologous_to=LmjF.30.3700_mRNA;ortholog_cluster=OG0004382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1365190 1365435 1 + . ID=LTnewLM_300045200 LTnewLM_30 AUGUSTUS mRNA 1365190 1365435 1 + . ID=LTnewLM_300045200.1;Parent=LTnewLM_300045200 LTnewLM_30 AUGUSTUS CDS 1365190 1365435 1 + 0 ID=LTnewLM_300045200.1:CDS:1;Parent=LTnewLM_300045200.1 ### LTnewLM_30 . polypeptide 1365190 1365435 . + . ID=LTnewLM_300045200.1:pep;Derives_from=LTnewLM_300045200.1;product=term%3Dhypothetical protein ### LTnewLM_30 AUGUSTUS gene 1366184 1370227 1 + . ID=LTnewLM_300045300 LTnewLM_30 AUGUSTUS mRNA 1366184 1370227 1 + . ID=LTnewLM_300045300.1;Parent=LTnewLM_300045300 LTnewLM_30 AUGUSTUS CDS 1366184 1370227 1 + 0 ID=LTnewLM_300045300.1:CDS:1;Parent=LTnewLM_300045300.1 ### LTnewLM_30 . polypeptide 1366184 1370227 . + . ID=LTnewLM_300045300.1:pep;Derives_from=LTnewLM_300045300.1;orthologous_to=LmjF.30.3710_mRNA;ortholog_cluster=OG0004383;product=term%3DCPSF A subunit region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03178;Ontology_term=GO:0003676,GO:0005634 LTnewLM_30 Pfam protein_match 1368791 1369933 . + . Parent=LTnewLM_300045300.1:pep;Name=PF03178;signature_desc=CPSF A subunit region;Ontology_term=GO:0003676,GO:0005634 ### LTnewLM_30 AUGUSTUS gene 1370706 1371023 1 + . ID=LTnewLM_300045400 LTnewLM_30 AUGUSTUS mRNA 1370706 1371023 1 + . ID=LTnewLM_300045400.1;Parent=LTnewLM_300045400 LTnewLM_30 AUGUSTUS CDS 1370706 1371023 1 + 0 ID=LTnewLM_300045400.1:CDS:1;Parent=LTnewLM_300045400.1 ### LTnewLM_30 . polypeptide 1370706 1371023 . + . ID=LTnewLM_300045400.1:pep;Derives_from=LTnewLM_300045400.1;orthologous_to=LTnewLM_300045500.1,LmjF.30.3720_mRNA,LmjF.30.3730_mRNA;ortholog_cluster=OG0000216;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_30 Pfam protein_match 1370754 1371014 . + . Parent=LTnewLM_300045400.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1371571 1371888 1 + . ID=LTnewLM_300045500 LTnewLM_30 AUGUSTUS mRNA 1371571 1371888 1 + . ID=LTnewLM_300045500.1;Parent=LTnewLM_300045500 LTnewLM_30 AUGUSTUS CDS 1371571 1371888 1 + 0 ID=LTnewLM_300045500.1:CDS:1;Parent=LTnewLM_300045500.1 ### LTnewLM_30 . polypeptide 1371571 1371888 . + . ID=LTnewLM_300045500.1:pep;Derives_from=LTnewLM_300045500.1;orthologous_to=LTnewLM_300045400.1,LmjF.30.3720_mRNA,LmjF.30.3730_mRNA;ortholog_cluster=OG0000216;product=term%3D60s Acidic ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00428;Ontology_term=GO:0005840,GO:0005622,GO:0003735,GO:0006414 LTnewLM_30 Pfam protein_match 1371619 1371879 . + . Parent=LTnewLM_300045500.1:pep;Name=PF00428;signature_desc=60s Acidic ribosomal protein;Ontology_term=GO:0003735,GO:0006414,GO:0005622,GO:0005840 ### LTnewLM_30 AUGUSTUS gene 1372166 1372834 1 + . ID=LTnewLM_300045600 LTnewLM_30 AUGUSTUS mRNA 1372166 1372834 1 + . ID=LTnewLM_300045600.1;Parent=LTnewLM_300045600 LTnewLM_30 AUGUSTUS CDS 1372166 1372834 1 + 0 ID=LTnewLM_300045600.1:CDS:1;Parent=LTnewLM_300045600.1 ### LTnewLM_30 . polypeptide 1372166 1372834 . + . ID=LTnewLM_300045600.1:pep;Derives_from=LTnewLM_300045600.1;orthologous_to=LmjF.30.3740_mRNA;ortholog_cluster=OG0004384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 . polypeptide 1379542 1379933 . - . ID=LTnewLM_300045700.1:pep;Derives_from=LTnewLM_300045700.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_30 AUGUSTUS gene 1379542 1384498 0.57 - . ID=LTnewLM_300045700;fiveEndPartial=true;End_range=.,. LTnewLM_30 AUGUSTUS mRNA 1379542 1384498 0.57 - . ID=LTnewLM_300045700.1;Parent=LTnewLM_300045700 LTnewLM_30 AUGUSTUS CDS 1379542 1379933 0.57 - 2 ID=LTnewLM_300045700.1:CDS:1;Parent=LTnewLM_300045700.1 ### LTnewLM_31 AUGUSTUS gene 1 486 0.72 + . ID=LTnewLM_310005000;fiveEndPartial=true;Start_range=.,. LTnewLM_31 AUGUSTUS mRNA 1 486 0.72 + . ID=LTnewLM_310005000.1;Parent=LTnewLM_310005000 LTnewLM_31 AUGUSTUS CDS 293 486 0.72 + 2 ID=LTnewLM_310005000.1:CDS:1;Parent=LTnewLM_310005000.1 ### LTnewLM_31 . contig 1 1523839 . + . Name=LTnewLM_CTG000032 LTnewLM_31 . polypeptide 293 486 . + . ID=LTnewLM_310005000.1:pep;Derives_from=LTnewLM_310005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 11646 13958 1 - . ID=LTnewLM_310005100 LTnewLM_31 AUGUSTUS mRNA 11646 13958 1 - . ID=LTnewLM_310005100.1;Parent=LTnewLM_310005100 LTnewLM_31 AUGUSTUS CDS 11646 13958 1 - 0 ID=LTnewLM_310005100.1:CDS:1;Parent=LTnewLM_310005100.1 ### LTnewLM_31 . polypeptide 11646 13958 . - . ID=LTnewLM_310005100.1:pep;Derives_from=LTnewLM_310005100.1;orthologous_to=LmjF.31.0010_mRNA;ortholog_cluster=OG0004385;product=term%3DCobalamin-independent synthase%2C N-terminal domain/Cobalamin-independent synthase%2C Catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08267|Pfam:PF01717;Ontology_term=GO:0008652,GO:0009086,GO:0008270,GO:0003871 LTnewLM_31 Pfam protein_match 11676 12641 . - . Parent=LTnewLM_310005100.1:pep;Name=PF01717;signature_desc=Cobalamin-independent synthase%2C Catalytic domain;Ontology_term=GO:0003871,GO:0008270,GO:0009086 LTnewLM_31 Pfam protein_match 12987 13940 . - . Parent=LTnewLM_310005100.1:pep;Name=PF08267;signature_desc=Cobalamin-independent synthase%2C N-terminal domain;Ontology_term=GO:0003871,GO:0008270,GO:0008652 LTnewLM_31 Pfam protein_match 13089 13493 . - . Parent=LTnewLM_310005100.1:pep;Name=PF01717;signature_desc=Cobalamin-independent synthase%2C Catalytic domain;Ontology_term=GO:0003871,GO:0008270,GO:0009086 ### LTnewLM_31 AUGUSTUS gene 16105 17049 1 - . ID=LTnewLM_310005200 LTnewLM_31 AUGUSTUS mRNA 16105 17049 1 - . ID=LTnewLM_310005200.1;Parent=LTnewLM_310005200 LTnewLM_31 AUGUSTUS CDS 16105 17049 1 - 0 ID=LTnewLM_310005200.1:CDS:1;Parent=LTnewLM_310005200.1 ### LTnewLM_31 . polypeptide 16105 17049 . - . ID=LTnewLM_310005200.1:pep;Derives_from=LTnewLM_310005200.1;orthologous_to=LmjF.31.0020_mRNA;ortholog_cluster=OG0004386;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_31 Pfam protein_match 16138 16863 . - . Parent=LTnewLM_310005200.1:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_31 Liftoff gene 18019 21176 . - . ID=LTnewLM_310005300;coverage=0.999;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0030_0 LTnewLM_31 Liftoff mRNA 18019 21176 . - . ID=LTnewLM_310005300.1;Parent=LTnewLM_310005300;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 18019 21176 . - 0 ID=LTnewLM_310005300.1:CDS:1;Parent=LTnewLM_310005300.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 18019 21176 . - . ID=LTnewLM_310005300.1:pep;Derives_from=LTnewLM_310005300.1;orthologous_to=LmjF.31.0030_mRNA;ortholog_cluster=OG0004387;product=term%3DRING-variant domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12906;Ontology_term=GO:0008270 LTnewLM_31 Pfam protein_match 21024 21152 . - . Parent=LTnewLM_310005300.1:pep;Name=PF12906;signature_desc=RING-variant domain;Ontology_term=GO:0008270 ### LTnewLM_31 . pseudogene 23188 24852 2.91e+03 - . ID=LTnewLM_310005400:pseudogene;has_internal_stop=true;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.31.0040:mRNA 1 546;original_prot_length=546 LTnewLM_31 . pseudogenic_transcript 23188 24852 . - . ID=LTnewLM_310005400.1;Parent=LTnewLM_310005400:pseudogene LTnewLM_31 . pseudogenic_exon 23188 24852 . - . ID=LTnewLM_310005400.1:pseudogenic_exon:1;Parent=LTnewLM_310005400.1 ### LTnewLM_31 . polypeptide 23188 24852 . - . ID=LTnewLM_310005400.1:pep;Derives_from=LTnewLM_310005400.1;orthologous_to=LmjF.31.0040_mRNA;ortholog_cluster=OG0007595;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 25443 26132 1 - . ID=LTnewLM_310005500 LTnewLM_31 AUGUSTUS mRNA 25443 26132 1 - . ID=LTnewLM_310005500.1;Parent=LTnewLM_310005500 LTnewLM_31 AUGUSTUS CDS 25443 26132 1 - 0 ID=LTnewLM_310005500.1:CDS:1;Parent=LTnewLM_310005500.1 ### LTnewLM_31 . polypeptide 25443 26132 . - . ID=LTnewLM_310005500.1:pep;Derives_from=LTnewLM_310005500.1;orthologous_to=LmjF.31.0050_mRNA;ortholog_cluster=OG0004388;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_31 Pfam protein_match 25467 25952 . - . Parent=LTnewLM_310005500.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_31 AUGUSTUS gene 26688 27089 1 - . ID=LTnewLM_310005600 LTnewLM_31 AUGUSTUS mRNA 26688 27089 1 - . ID=LTnewLM_310005600.1;Parent=LTnewLM_310005600 LTnewLM_31 AUGUSTUS CDS 26688 27089 1 - 0 ID=LTnewLM_310005600.1:CDS:1;Parent=LTnewLM_310005600.1 ### LTnewLM_31 . polypeptide 26688 27089 . - . ID=LTnewLM_310005600.1:pep;Derives_from=LTnewLM_310005600.1;orthologous_to=LmjF.31.0060_mRNA;ortholog_cluster=OG0004389;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 27435 30287 1 - . ID=LTnewLM_310005700 LTnewLM_31 AUGUSTUS mRNA 27435 30287 1 - . ID=LTnewLM_310005700.1;Parent=LTnewLM_310005700 LTnewLM_31 AUGUSTUS CDS 27435 30287 1 - 0 ID=LTnewLM_310005700.1:CDS:1;Parent=LTnewLM_310005700.1 ### LTnewLM_31 . polypeptide 27435 30287 . - . ID=LTnewLM_310005700.1:pep;Derives_from=LTnewLM_310005700.1;orthologous_to=LmjF.31.0070_mRNA;ortholog_cluster=OG0004390;product=term%3DT5orf172 domain/Type III restriction enzyme%2C res subunit/DEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10544|Pfam:PF04851|Pfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524,GO:0016787,GO:0003677 LTnewLM_31 Pfam protein_match 28626 28922 . - . Parent=LTnewLM_310005700.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_31 Pfam protein_match 29082 29603 . - . Parent=LTnewLM_310005700.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_31 Pfam protein_match 29091 29609 . - . Parent=LTnewLM_310005700.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_31 Pfam protein_match 29991 30248 . - . Parent=LTnewLM_310005700.1:pep;Name=PF10544;signature_desc=T5orf172 domain ### LTnewLM_31 AUGUSTUS gene 32029 32724 1 - . ID=LTnewLM_310005800 LTnewLM_31 AUGUSTUS mRNA 32029 32724 1 - . ID=LTnewLM_310005800.1;Parent=LTnewLM_310005800 LTnewLM_31 AUGUSTUS CDS 32029 32724 1 - 0 ID=LTnewLM_310005800.1:CDS:1;Parent=LTnewLM_310005800.1 ### LTnewLM_31 . polypeptide 32029 32724 . - . ID=LTnewLM_310005800.1:pep;Derives_from=LTnewLM_310005800.1;orthologous_to=LmjF.31.0080_mRNA;ortholog_cluster=OG0004391;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 33421 34899 1 - . ID=LTnewLM_310005900 LTnewLM_31 AUGUSTUS mRNA 33421 34899 1 - . ID=LTnewLM_310005900.1;Parent=LTnewLM_310005900 LTnewLM_31 AUGUSTUS CDS 33421 34899 1 - 0 ID=LTnewLM_310005900.1:CDS:1;Parent=LTnewLM_310005900.1 ### LTnewLM_31 . polypeptide 33421 34899 . - . ID=LTnewLM_310005900.1:pep;Derives_from=LTnewLM_310005900.1;orthologous_to=LmjF.31.0090_mRNA;ortholog_cluster=OG0004392;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 35422 36516 1 - . ID=LTnewLM_310006000 LTnewLM_31 AUGUSTUS mRNA 35422 36516 1 - . ID=LTnewLM_310006000.1;Parent=LTnewLM_310006000 LTnewLM_31 AUGUSTUS CDS 35422 36516 1 - 0 ID=LTnewLM_310006000.1:CDS:1;Parent=LTnewLM_310006000.1 ### LTnewLM_31 . polypeptide 35422 36516 . - . ID=LTnewLM_310006000.1:pep;Derives_from=LTnewLM_310006000.1;orthologous_to=LmjF.31.0100_mRNA;ortholog_cluster=OG0004393;product=term%3DtRNA N6-adenosine threonylcarbamoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00814 LTnewLM_31 Pfam protein_match 35530 36438 . - . Parent=LTnewLM_310006000.1:pep;Name=PF00814;signature_desc=tRNA N6-adenosine threonylcarbamoyltransferase ### LTnewLM_31 AUGUSTUS gene 36823 37074 1 - . ID=LTnewLM_310006100 LTnewLM_31 AUGUSTUS mRNA 36823 37074 1 - . ID=LTnewLM_310006100.1;Parent=LTnewLM_310006100 LTnewLM_31 AUGUSTUS CDS 36823 37074 1 - 0 ID=LTnewLM_310006100.1:CDS:1;Parent=LTnewLM_310006100.1 ### LTnewLM_31 . polypeptide 36823 37074 . - . ID=LTnewLM_310006100.1:pep;Derives_from=LTnewLM_310006100.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 37662 40019 1 - . ID=LTnewLM_310006200 LTnewLM_31 AUGUSTUS mRNA 37662 40019 1 - . ID=LTnewLM_310006200.1;Parent=LTnewLM_310006200 LTnewLM_31 AUGUSTUS CDS 37662 40019 1 - 0 ID=LTnewLM_310006200.1:CDS:1;Parent=LTnewLM_310006200.1 ### LTnewLM_31 . polypeptide 37662 40019 . - . ID=LTnewLM_310006200.1:pep;Derives_from=LTnewLM_310006200.1;orthologous_to=LmjF.31.0110_mRNA;ortholog_cluster=OG0004394;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 40451 40834 1 - . ID=LTnewLM_310006300 LTnewLM_31 AUGUSTUS mRNA 40451 40834 1 - . ID=LTnewLM_310006300.1;Parent=LTnewLM_310006300 LTnewLM_31 AUGUSTUS CDS 40451 40834 1 - 0 ID=LTnewLM_310006300.1:CDS:1;Parent=LTnewLM_310006300.1 ### LTnewLM_31 . polypeptide 40451 40834 . - . ID=LTnewLM_310006300.1:pep;Derives_from=LTnewLM_310006300.1;orthologous_to=LmjF.31.0120_mRNA;ortholog_cluster=OG0004395;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 41334 43805 1 - . ID=LTnewLM_310006400 LTnewLM_31 AUGUSTUS mRNA 41334 43805 1 - . ID=LTnewLM_310006400.1;Parent=LTnewLM_310006400 LTnewLM_31 AUGUSTUS CDS 41334 43805 1 - 0 ID=LTnewLM_310006400.1:CDS:1;Parent=LTnewLM_310006400.1 ### LTnewLM_31 . polypeptide 41334 43805 . - . ID=LTnewLM_310006400.1:pep;Derives_from=LTnewLM_310006400.1;orthologous_to=LmjF.31.0130_mRNA;ortholog_cluster=OG0004396;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 44484 45860 1 - . ID=LTnewLM_310006500 LTnewLM_31 AUGUSTUS mRNA 44484 45860 1 - . ID=LTnewLM_310006500.1;Parent=LTnewLM_310006500 LTnewLM_31 AUGUSTUS CDS 44484 45860 1 - 0 ID=LTnewLM_310006500.1:CDS:1;Parent=LTnewLM_310006500.1 ### LTnewLM_31 . polypeptide 44484 45860 . - . ID=LTnewLM_310006500.1:pep;Derives_from=LTnewLM_310006500.1;orthologous_to=LmjF.31.0140_mRNA;ortholog_cluster=OG0004397;product=term%3DUbiquitin family/Ubiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00240|Pfam:PF13423|Pfam:PF00443;Ontology_term=GO:0005515,GO:0036459,GO:0006511 LTnewLM_31 Pfam protein_match 44532 45548 . - . Parent=LTnewLM_310006500.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_31 Pfam protein_match 44646 45548 . - . Parent=LTnewLM_310006500.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase LTnewLM_31 Pfam protein_match 45645 45851 . - . Parent=LTnewLM_310006500.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 46525 47493 1 - . ID=LTnewLM_310006600 LTnewLM_31 AUGUSTUS mRNA 46525 47493 1 - . ID=LTnewLM_310006600.1;Parent=LTnewLM_310006600 LTnewLM_31 AUGUSTUS CDS 46525 47493 1 - 0 ID=LTnewLM_310006600.1:CDS:1;Parent=LTnewLM_310006600.1 ### LTnewLM_31 . polypeptide 46525 47493 . - . ID=LTnewLM_310006600.1:pep;Derives_from=LTnewLM_310006600.1;orthologous_to=LmjF.31.0150_mRNA;ortholog_cluster=OG0004398;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 48411 51956 1 - . ID=LTnewLM_310006700 LTnewLM_31 AUGUSTUS mRNA 48411 51956 1 - . ID=LTnewLM_310006700.1;Parent=LTnewLM_310006700 LTnewLM_31 AUGUSTUS CDS 48411 51956 1 - 0 ID=LTnewLM_310006700.1:CDS:1;Parent=LTnewLM_310006700.1 ### LTnewLM_31 . polypeptide 48411 51956 . - . ID=LTnewLM_310006700.1:pep;Derives_from=LTnewLM_310006700.1;orthologous_to=LmjF.31.0160_mRNA;ortholog_cluster=OG0004399;product=term%3DRNA polymerase beta subunit/RNA polymerase Rpb2%2C domain 2/RNA polymerase Rpb2%2C domain 3/RNA polymerase Rpb2%2C domain 4/RNA polymerase Rpb2%2C domain 5/RNA polymerase Rpb2%2C domain 6/RNA polymerase Rpb2%2C domain 7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04563|Pfam:PF04561|Pfam:PF04565|Pfam:PF04566|Pfam:PF04567|Pfam:PF00562|Pfam:PF04560;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_31 Pfam protein_match 48432 48698 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04560;signature_desc=RNA polymerase Rpb2%2C domain 7;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 48705 49817 . - . Parent=LTnewLM_310006700.1:pep;Name=PF00562;signature_desc=RNA polymerase Rpb2%2C domain 6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 49839 49964 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04567;signature_desc=RNA polymerase Rpb2%2C domain 5;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 50049 50231 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04566;signature_desc=RNA polymerase Rpb2%2C domain 4;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 50346 50531 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04565;signature_desc=RNA polymerase Rpb2%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 50610 51821 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04563;signature_desc=RNA polymerase beta subunit;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 50754 51170 . - . Parent=LTnewLM_310006700.1:pep;Name=PF04561;signature_desc=RNA polymerase Rpb2%2C domain 2;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_31 AUGUSTUS gene 52500 53183 1 - . ID=LTnewLM_310006800 LTnewLM_31 AUGUSTUS mRNA 52500 53183 1 - . ID=LTnewLM_310006800.1;Parent=LTnewLM_310006800 LTnewLM_31 AUGUSTUS CDS 52500 52508 1 - 0 ID=LTnewLM_310006800.1:CDS:1;Parent=LTnewLM_310006800.1 LTnewLM_31 AUGUSTUS CDS 52557 53183 1 - 0 ID=LTnewLM_310006800.1:CDS:2;Parent=LTnewLM_310006800.1 ### LTnewLM_31 . polypeptide 52500 53183 . - . ID=LTnewLM_310006800.1:pep;Derives_from=LTnewLM_310006800.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 53655 55181 1 - . ID=LTnewLM_310006900 LTnewLM_31 AUGUSTUS mRNA 53655 55181 1 - . ID=LTnewLM_310006900.1;Parent=LTnewLM_310006900 LTnewLM_31 AUGUSTUS CDS 53655 55181 1 - 0 ID=LTnewLM_310006900.1:CDS:1;Parent=LTnewLM_310006900.1 ### LTnewLM_31 . polypeptide 53655 55181 . - . ID=LTnewLM_310006900.1:pep;Derives_from=LTnewLM_310006900.1;orthologous_to=LmjF.31.0170_mRNA;ortholog_cluster=OG0004400;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 55802 56275 1 - . ID=LTnewLM_310007000 LTnewLM_31 AUGUSTUS mRNA 55802 56275 1 - . ID=LTnewLM_310007000.1;Parent=LTnewLM_310007000 LTnewLM_31 AUGUSTUS CDS 55802 56275 1 - 0 ID=LTnewLM_310007000.1:CDS:1;Parent=LTnewLM_310007000.1 ### LTnewLM_31 . polypeptide 55802 56275 . - . ID=LTnewLM_310007000.1:pep;Derives_from=LTnewLM_310007000.1;orthologous_to=LmjF.31.0180_mRNA;ortholog_cluster=OG0004401;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 56911 58797 1 - . ID=LTnewLM_310007100 LTnewLM_31 AUGUSTUS mRNA 56911 58797 1 - . ID=LTnewLM_310007100.1;Parent=LTnewLM_310007100 LTnewLM_31 AUGUSTUS CDS 56911 58797 1 - 0 ID=LTnewLM_310007100.1:CDS:1;Parent=LTnewLM_310007100.1 ### LTnewLM_31 . polypeptide 56911 58797 . - . ID=LTnewLM_310007100.1:pep;Derives_from=LTnewLM_310007100.1;orthologous_to=LmjF.31.0190_mRNA;ortholog_cluster=OG0004402;product=term%3DN-terminal domain of 16S rRNA methyltransferase RsmF/16S rRNA methyltransferase RsmB/F/FtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17125|Pfam:PF01189|Pfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_31 Pfam protein_match 57202 57813 . - . Parent=LTnewLM_310007100.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 LTnewLM_31 Pfam protein_match 57385 57792 . - . Parent=LTnewLM_310007100.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 LTnewLM_31 Pfam protein_match 57826 58074 . - . Parent=LTnewLM_310007100.1:pep;Name=PF17125;signature_desc=N-terminal domain of 16S rRNA methyltransferase RsmF ### LTnewLM_31 . polypeptide 59566 60912 . - . ID=LTnewLM_310007200.1:pep;Derives_from=LTnewLM_310007200.1;orthologous_to=LTnewLM_310007200.2,LmjF.31.0200.1_mRNA,LmjF.31.0200.2_mRNA;ortholog_cluster=OG0000217;product=term%3DNLE (NUC135) domain/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08154|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60184 60294 . - . Parent=LTnewLM_310007200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60490 60582 . - . Parent=LTnewLM_310007200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60673 60846 . - . Parent=LTnewLM_310007200.1:pep;Name=PF08154;signature_desc=NLE (NUC135) domain ### LTnewLM_31 . polypeptide 59566 61023 . - . ID=LTnewLM_310007200.2:pep;Derives_from=LTnewLM_310007200.2;orthologous_to=LTnewLM_310007200.1,LmjF.31.0200.1_mRNA,LmjF.31.0200.2_mRNA;ortholog_cluster=OG0000217;product=term%3DNLE (NUC135) domain/WD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08154|Pfam:PF00400;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60184 60294 . - . Parent=LTnewLM_310007200.2:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60490 60582 . - . Parent=LTnewLM_310007200.2:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 60673 60846 . - . Parent=LTnewLM_310007200.2:pep;Name=PF08154;signature_desc=NLE (NUC135) domain ### LTnewLM_31 Liftoff gene 59566 61912 . - . ID=LTnewLM_310007200;coverage=0.994;sequence_ID=0.932;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.31.0200_0 LTnewLM_31 Liftoff mRNA 59566 60977 . - . ID=LTnewLM_310007200.1;Parent=LTnewLM_310007200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 59566 60912 . - 0 ID=LTnewLM_310007200.1:CDS:1;Parent=LTnewLM_310007200.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 60913 60977 . - . ID=LTnewLM_310007200:five_prime_UTR;Parent=LTnewLM_310007200.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 59566 61912 . - . ID=LTnewLM_310007200.2;Parent=LTnewLM_310007200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 59566 61023 . - 0 ID=LTnewLM_310007200.2:CDS:1;Parent=LTnewLM_310007200.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 61024 61912 . - . ID=LTnewLM_310007200:five_prime_UTR.1;Parent=LTnewLM_310007200.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 62174 62755 1 - . ID=LTnewLM_310007300 LTnewLM_31 AUGUSTUS mRNA 62174 62755 1 - . ID=LTnewLM_310007300.1;Parent=LTnewLM_310007300 LTnewLM_31 AUGUSTUS CDS 62174 62755 1 - 0 ID=LTnewLM_310007300.1:CDS:1;Parent=LTnewLM_310007300.1 ### LTnewLM_31 . polypeptide 62174 62755 . - . ID=LTnewLM_310007300.1:pep;Derives_from=LTnewLM_310007300.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 63218 64783 1 - . ID=LTnewLM_310007400 LTnewLM_31 AUGUSTUS mRNA 63218 64783 1 - . ID=LTnewLM_310007400.1;Parent=LTnewLM_310007400 LTnewLM_31 AUGUSTUS CDS 63218 64783 1 - 0 ID=LTnewLM_310007400.1:CDS:1;Parent=LTnewLM_310007400.1 ### LTnewLM_31 . polypeptide 63218 64783 . - . ID=LTnewLM_310007400.1:pep;Derives_from=LTnewLM_310007400.1;orthologous_to=LmjF.31.0210_mRNA;ortholog_cluster=OG0004403;product=term%3DN-terminal beta-sandwich domain of polyadenylation factor/mRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16573|Pfam:PF16575 LTnewLM_31 Pfam protein_match 64070 64378 . - . Parent=LTnewLM_310007400.1:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop LTnewLM_31 Pfam protein_match 64436 64651 . - . Parent=LTnewLM_310007400.1:pep;Name=PF16573;signature_desc=N-terminal beta-sandwich domain of polyadenylation factor ### LTnewLM_31 AUGUSTUS gene 65247 65870 1 - . ID=LTnewLM_310007500 LTnewLM_31 AUGUSTUS mRNA 65247 65870 1 - . ID=LTnewLM_310007500.1;Parent=LTnewLM_310007500 LTnewLM_31 AUGUSTUS CDS 65247 65870 1 - 0 ID=LTnewLM_310007500.1:CDS:1;Parent=LTnewLM_310007500.1 ### LTnewLM_31 . polypeptide 65247 65870 . - . ID=LTnewLM_310007500.1:pep;Derives_from=LTnewLM_310007500.1;orthologous_to=LmjF.31.0220_mRNA;ortholog_cluster=OG0004404;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 66458 69037 1 - . ID=LTnewLM_310007600 LTnewLM_31 AUGUSTUS mRNA 66458 69037 1 - . ID=LTnewLM_310007600.1;Parent=LTnewLM_310007600 LTnewLM_31 AUGUSTUS CDS 66458 69037 1 - 0 ID=LTnewLM_310007600.1:CDS:1;Parent=LTnewLM_310007600.1 ### LTnewLM_31 . polypeptide 66458 69037 . - . ID=LTnewLM_310007600.1:pep;Derives_from=LTnewLM_310007600.1;orthologous_to=LmjF.31.0230_mRNA;ortholog_cluster=OG0004405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 69920 71443 1 - . ID=LTnewLM_310007700 LTnewLM_31 AUGUSTUS mRNA 69920 71443 1 - . ID=LTnewLM_310007700.1;Parent=LTnewLM_310007700 LTnewLM_31 AUGUSTUS CDS 69920 71443 1 - 0 ID=LTnewLM_310007700.1:CDS:1;Parent=LTnewLM_310007700.1 ### LTnewLM_31 . polypeptide 69920 71443 . - . ID=LTnewLM_310007700.1:pep;Derives_from=LTnewLM_310007700.1;orthologous_to=LmjF.31.0240_mRNA;ortholog_cluster=OG0004406;product=term%3DJmjC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08007 LTnewLM_31 Pfam protein_match 70607 70957 . - . Parent=LTnewLM_310007700.1:pep;Name=PF08007;signature_desc=JmjC domain ### LTnewLM_31 AUGUSTUS gene 72155 75670 1 - . ID=LTnewLM_310007800 LTnewLM_31 AUGUSTUS mRNA 72155 75670 1 - . ID=LTnewLM_310007800.1;Parent=LTnewLM_310007800 LTnewLM_31 AUGUSTUS CDS 72155 75670 1 - 0 ID=LTnewLM_310007800.1:CDS:1;Parent=LTnewLM_310007800.1 ### LTnewLM_31 . polypeptide 72155 75670 . - . ID=LTnewLM_310007800.1:pep;Derives_from=LTnewLM_310007800.1;orthologous_to=LmjF.31.0250_mRNA;ortholog_cluster=OG0004407;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_31 Pfam protein_match 73643 74014 . - . Parent=LTnewLM_310007800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_31 Pfam protein_match 74222 74668 . - . Parent=LTnewLM_310007800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_31 Liftoff gene 77320 77541 . - . ID=LTnewLM_310007900;coverage=0.902;sequence_ID=0.813;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0255_0 LTnewLM_31 Liftoff mRNA 77320 77541 . - . ID=LTnewLM_310007900.1;Parent=LTnewLM_310007900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 77320 77541 . - 0 ID=LTnewLM_310007900.1:CDS:1;Parent=LTnewLM_310007900.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 77320 77541 . - . ID=LTnewLM_310007900.1:pep;Derives_from=LTnewLM_310007900.1;orthologous_to=LmjF.31.0255_mRNA;ortholog_cluster=OG0004408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 78130 79015 . - . ID=LTnewLM_310008000:pseudogene;coverage=1.0;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0260_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 78130 79015 . - . ID=LTnewLM_310008000.1;Parent=LTnewLM_310008000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 78130 79015 . - . ID=LTnewLM_310008000.1:pseudogenic_exon:1;Parent=LTnewLM_310008000.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 78130 79015 . - . ID=LTnewLM_310008000.1:pep;Derives_from=LTnewLM_310008000.1;orthologous_to=LmjF.31.0260_mRNA;ortholog_cluster=OG0007596;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 80232 81209 1 - . ID=LTnewLM_310008100 LTnewLM_31 AUGUSTUS mRNA 80232 81209 1 - . ID=LTnewLM_310008100.1;Parent=LTnewLM_310008100 LTnewLM_31 AUGUSTUS CDS 80232 81209 1 - 0 ID=LTnewLM_310008100.1:CDS:1;Parent=LTnewLM_310008100.1 ### LTnewLM_31 . polypeptide 80232 81209 . - . ID=LTnewLM_310008100.1:pep;Derives_from=LTnewLM_310008100.1;orthologous_to=LmjF.31.0270_mRNA;ortholog_cluster=OG0004409;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13640|Pfam:PF13661;Ontology_term=GO:0016706,GO:0016491,GO:0055114 LTnewLM_31 Pfam protein_match 80526 80780 . - . Parent=LTnewLM_310008100.1:pep;Name=PF13661;signature_desc=2OG-Fe(II) oxygenase superfamily LTnewLM_31 Pfam protein_match 80526 80786 . - . Parent=LTnewLM_310008100.1:pep;Name=PF13640;signature_desc=2OG-Fe(II) oxygenase superfamily;Ontology_term=GO:0016491,GO:0016706,GO:0055114 ### LTnewLM_31 AUGUSTUS gene 81808 82833 1 - . ID=LTnewLM_310008200 LTnewLM_31 AUGUSTUS mRNA 81808 82833 1 - . ID=LTnewLM_310008200.1;Parent=LTnewLM_310008200 LTnewLM_31 AUGUSTUS CDS 81808 82833 1 - 0 ID=LTnewLM_310008200.1:CDS:1;Parent=LTnewLM_310008200.1 ### LTnewLM_31 . polypeptide 81808 82833 . - . ID=LTnewLM_310008200.1:pep;Derives_from=LTnewLM_310008200.1;orthologous_to=LmjF.31.0280_mRNA;ortholog_cluster=OG0004410;product=term%3DEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)/Endoplasmic reticulum vesicle transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13850|Pfam:PF07970 LTnewLM_31 Pfam protein_match 81928 82368 . - . Parent=LTnewLM_310008200.1:pep;Name=PF07970;signature_desc=Endoplasmic reticulum vesicle transporter LTnewLM_31 Pfam protein_match 82543 82818 . - . Parent=LTnewLM_310008200.1:pep;Name=PF13850;signature_desc=Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ### LTnewLM_31 AUGUSTUS gene 83799 86654 1 - . ID=LTnewLM_310008300 LTnewLM_31 AUGUSTUS mRNA 83799 86654 1 - . ID=LTnewLM_310008300.1;Parent=LTnewLM_310008300 LTnewLM_31 AUGUSTUS CDS 83799 86654 1 - 0 ID=LTnewLM_310008300.1:CDS:1;Parent=LTnewLM_310008300.1 ### LTnewLM_31 . polypeptide 83799 86654 . - . ID=LTnewLM_310008300.1:pep;Derives_from=LTnewLM_310008300.1;orthologous_to=LmjF.31.0290_mRNA;ortholog_cluster=OG0004411;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_31 Pfam protein_match 84759 85679 . - . Parent=LTnewLM_310008300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_31 Pfam protein_match 85281 85700 . - . Parent=LTnewLM_310008300.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_31 AUGUSTUS gene 87353 90772 1 - . ID=LTnewLM_310008400 LTnewLM_31 AUGUSTUS mRNA 87353 90772 1 - . ID=LTnewLM_310008400.1;Parent=LTnewLM_310008400 LTnewLM_31 AUGUSTUS CDS 87353 90772 1 - 0 ID=LTnewLM_310008400.1:CDS:1;Parent=LTnewLM_310008400.1 ### LTnewLM_31 . polypeptide 87353 90772 . - . ID=LTnewLM_310008400.1:pep;Derives_from=LTnewLM_310008400.1;orthologous_to=LmjF.31.0300_mRNA;ortholog_cluster=OG0004412;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 90077 90526 . - . Parent=LTnewLM_310008400.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 AUGUSTUS gene 92315 95728 1 - . ID=LTnewLM_310008500 LTnewLM_31 AUGUSTUS mRNA 92315 95728 1 - . ID=LTnewLM_310008500.1;Parent=LTnewLM_310008500 LTnewLM_31 AUGUSTUS CDS 92315 95728 1 - 0 ID=LTnewLM_310008500.1:CDS:1;Parent=LTnewLM_310008500.1 ### LTnewLM_31 . polypeptide 92315 95728 . - . ID=LTnewLM_310008500.1:pep;Derives_from=LTnewLM_310008500.1;orthologous_to=LmjF.31.0310_mRNA;ortholog_cluster=OG0004413;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 95030 95482 . - . Parent=LTnewLM_310008500.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 AUGUSTUS gene 98204 99811 1 - . ID=LTnewLM_310008600 LTnewLM_31 AUGUSTUS mRNA 98204 99811 1 - . ID=LTnewLM_310008600.1;Parent=LTnewLM_310008600 LTnewLM_31 AUGUSTUS CDS 98204 99811 1 - 0 ID=LTnewLM_310008600.1:CDS:1;Parent=LTnewLM_310008600.1 ### LTnewLM_31 . polypeptide 98204 99811 . - . ID=LTnewLM_310008600.1:pep;Derives_from=LTnewLM_310008600.1;orthologous_to=LTnewLM_270011600.1,LmjF.27.0680_mRNA,LmjF.31.0320_mRNA;ortholog_cluster=OG0000190;product=term%3DTryptophan/tyrosine permease family/Transmembrane amino acid transporter protein/Amino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03222|Pfam:PF01490|Pfam:PF13520;Ontology_term=GO:0016020,GO:0015171,GO:0003333 LTnewLM_31 Pfam protein_match 98234 99406 . - . Parent=LTnewLM_310008600.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 98681 99403 . - . Parent=LTnewLM_310008600.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 LTnewLM_31 Pfam protein_match 98699 99406 . - . Parent=LTnewLM_310008600.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 AUGUSTUS gene 102776 104278 1 - . ID=LTnewLM_310008700 LTnewLM_31 AUGUSTUS mRNA 102776 104278 1 - . ID=LTnewLM_310008700.1;Parent=LTnewLM_310008700 LTnewLM_31 AUGUSTUS CDS 102776 104278 1 - 0 ID=LTnewLM_310008700.1:CDS:1;Parent=LTnewLM_310008700.1 ### LTnewLM_31 . polypeptide 102776 104278 . - . ID=LTnewLM_310008700.1:pep;Derives_from=LTnewLM_310008700.1;orthologous_to=LTnewLM_020009800.1,LTnewLM_020009800.2,LTnewLM_270011500.1,LTnewLM_310008800.1,LmjF.27.0670_mRNA,LmjF.31.0330_mRNA,LmjF.31.0340_mRNA;ortholog_cluster=OG0000025;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_31 Pfam protein_match 102794 103963 . - . Parent=LTnewLM_310008700.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_31 AUGUSTUS gene 110220 111623 1 - . ID=LTnewLM_310008800 LTnewLM_31 AUGUSTUS mRNA 110220 111623 1 - . ID=LTnewLM_310008800.1;Parent=LTnewLM_310008800 LTnewLM_31 AUGUSTUS CDS 110220 111623 1 - 0 ID=LTnewLM_310008800.1:CDS:1;Parent=LTnewLM_310008800.1 ### LTnewLM_31 . polypeptide 110220 111623 . - . ID=LTnewLM_310008800.1:pep;Derives_from=LTnewLM_310008800.1;orthologous_to=LTnewLM_020009800.1,LTnewLM_020009800.2,LTnewLM_270011500.1,LTnewLM_310008700.1,LmjF.27.0670_mRNA,LmjF.31.0330_mRNA,LmjF.31.0340_mRNA;ortholog_cluster=OG0000025;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_31 Pfam protein_match 110238 111407 . - . Parent=LTnewLM_310008800.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_31 AUGUSTUS gene 115229 116764 1 - . ID=LTnewLM_310008900 LTnewLM_31 AUGUSTUS mRNA 115229 116764 1 - . ID=LTnewLM_310008900.1;Parent=LTnewLM_310008900 LTnewLM_31 AUGUSTUS CDS 115229 116764 1 - 0 ID=LTnewLM_310008900.1:CDS:1;Parent=LTnewLM_310008900.1 ### LTnewLM_31 . polypeptide 115229 116764 . - . ID=LTnewLM_310008900.1:pep;Derives_from=LTnewLM_310008900.1;orthologous_to=LmjF.31.0350_mRNA;ortholog_cluster=OG0004414;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family/Amino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222|Pfam:PF13520;Ontology_term=GO:0016020,GO:0015171,GO:0003333 LTnewLM_31 Pfam protein_match 115262 116434 . - . Parent=LTnewLM_310008900.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 115715 116407 . - . Parent=LTnewLM_310008900.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 LTnewLM_31 Pfam protein_match 115940 116431 . - . Parent=LTnewLM_310008900.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 AUGUSTUS gene 118156 121134 1 - . ID=LTnewLM_310009000 LTnewLM_31 AUGUSTUS mRNA 118156 121134 1 - . ID=LTnewLM_310009000.1;Parent=LTnewLM_310009000 LTnewLM_31 AUGUSTUS CDS 118156 121134 1 - 0 ID=LTnewLM_310009000.1:CDS:1;Parent=LTnewLM_310009000.1 ### LTnewLM_31 . polypeptide 118156 121134 . - . ID=LTnewLM_310009000.1:pep;Derives_from=LTnewLM_310009000.1;orthologous_to=LmjF.31.0360_mRNA;ortholog_cluster=OG0004415;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 120466 120912 . - . Parent=LTnewLM_310009000.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 AUGUSTUS gene 122784 124820 1 - . ID=LTnewLM_310009100 LTnewLM_31 AUGUSTUS mRNA 122784 124820 1 - . ID=LTnewLM_310009100.1;Parent=LTnewLM_310009100 LTnewLM_31 AUGUSTUS CDS 122784 124820 1 - 0 ID=LTnewLM_310009100.1:CDS:1;Parent=LTnewLM_310009100.1 ### LTnewLM_31 . polypeptide 122784 124820 . - . ID=LTnewLM_310009100.1:pep;Derives_from=LTnewLM_310009100.1;orthologous_to=LmjF.31.0370_mRNA;ortholog_cluster=OG0004416;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 125422 129564 1 - . ID=LTnewLM_310009200 LTnewLM_31 AUGUSTUS mRNA 125422 129564 1 - . ID=LTnewLM_310009200.1;Parent=LTnewLM_310009200 LTnewLM_31 AUGUSTUS CDS 125422 129564 1 - 0 ID=LTnewLM_310009200.1:CDS:1;Parent=LTnewLM_310009200.1 ### LTnewLM_31 . polypeptide 125422 129564 . - . ID=LTnewLM_310009200.1:pep;Derives_from=LTnewLM_310009200.1;orthologous_to=LmjF.31.0380_mRNA;ortholog_cluster=OG0004417;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 132355 134709 1 - . ID=LTnewLM_310009300 LTnewLM_31 AUGUSTUS mRNA 132355 134709 1 - . ID=LTnewLM_310009300.1;Parent=LTnewLM_310009300 LTnewLM_31 AUGUSTUS CDS 132355 134709 1 - 0 ID=LTnewLM_310009300.1:CDS:1;Parent=LTnewLM_310009300.1 ### LTnewLM_31 . polypeptide 132355 134709 . - . ID=LTnewLM_310009300.1:pep;Derives_from=LTnewLM_310009300.1;orthologous_to=LmjF.31.0390_mRNA;ortholog_cluster=OG0004418;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 132946 133920 . - . Parent=LTnewLM_310009300.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 134080 134358 . - . Parent=LTnewLM_310009300.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 AUGUSTUS gene 135519 140006 1 - . ID=LTnewLM_310009400 LTnewLM_31 AUGUSTUS mRNA 135519 140006 1 - . ID=LTnewLM_310009400.1;Parent=LTnewLM_310009400 LTnewLM_31 AUGUSTUS CDS 135519 140006 1 - 0 ID=LTnewLM_310009400.1:CDS:1;Parent=LTnewLM_310009400.1 ### LTnewLM_31 . polypeptide 135519 140006 . - . ID=LTnewLM_310009400.1:pep;Derives_from=LTnewLM_310009400.1;orthologous_to=LmjF.31.0400_mRNA;ortholog_cluster=OG0004419;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 136473 137303 . - . Parent=LTnewLM_310009400.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 137490 137747 . - . Parent=LTnewLM_310009400.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 AUGUSTUS gene 142183 144807 1 - . ID=LTnewLM_310009500 LTnewLM_31 AUGUSTUS mRNA 142183 144807 1 - . ID=LTnewLM_310009500.1;Parent=LTnewLM_310009500 LTnewLM_31 AUGUSTUS CDS 142183 144807 1 - 0 ID=LTnewLM_310009500.1:CDS:1;Parent=LTnewLM_310009500.1 ### LTnewLM_31 . polypeptide 142183 144807 . - . ID=LTnewLM_310009500.1:pep;Derives_from=LTnewLM_310009500.1;orthologous_to=LmjF.31.0410_mRNA;ortholog_cluster=OG0004420;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 142912 143895 . - . Parent=LTnewLM_310009500.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 144070 144348 . - . Parent=LTnewLM_310009500.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 . pseudogene 145507 145921 . - . ID=LTnewLM_310009600:pseudogene;coverage=0.871;sequence_ID=0.771;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0420_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 145507 145921 . - . ID=LTnewLM_310009600.1;Parent=LTnewLM_310009600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 145507 145921 . - . ID=LTnewLM_310009600.1:pseudogenic_exon:1;Parent=LTnewLM_310009600.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 145507 145921 . - . ID=LTnewLM_310009600.1:pep;Derives_from=LTnewLM_310009600.1;orthologous_to=LmjF.31.0420_mRNA;ortholog_cluster=OG0007597;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 147738 150557 1 - . ID=LTnewLM_310009700 LTnewLM_31 AUGUSTUS mRNA 147738 150557 1 - . ID=LTnewLM_310009700.1;Parent=LTnewLM_310009700 LTnewLM_31 AUGUSTUS CDS 147738 150557 1 - 0 ID=LTnewLM_310009700.1:CDS:1;Parent=LTnewLM_310009700.1 ### LTnewLM_31 . polypeptide 147738 150557 . - . ID=LTnewLM_310009700.1:pep;Derives_from=LTnewLM_310009700.1;orthologous_to=LmjF.31.0430_mRNA;ortholog_cluster=OG0004421;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 148374 149339 . - . Parent=LTnewLM_310009700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 149547 149819 . - . Parent=LTnewLM_310009700.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 AUGUSTUS gene 153231 155405 1 - . ID=LTnewLM_310009800 LTnewLM_31 AUGUSTUS mRNA 153231 155405 1 - . ID=LTnewLM_310009800.1;Parent=LTnewLM_310009800 LTnewLM_31 AUGUSTUS CDS 153231 155405 1 - 0 ID=LTnewLM_310009800.1:CDS:1;Parent=LTnewLM_310009800.1 ### LTnewLM_31 . polypeptide 153231 155405 . - . ID=LTnewLM_310009800.1:pep;Derives_from=LTnewLM_310009800.1;orthologous_to=LmjF.31.0440_mRNA;ortholog_cluster=OG0004422;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 153822 154763 . - . Parent=LTnewLM_310009800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 154914 155183 . - . Parent=LTnewLM_310009800.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 AUGUSTUS gene 157809 158180 0.88 - . ID=LTnewLM_310009900 LTnewLM_31 AUGUSTUS mRNA 157809 158180 0.88 - . ID=LTnewLM_310009900.1;Parent=LTnewLM_310009900 LTnewLM_31 AUGUSTUS CDS 157809 158180 0.88 - 0 ID=LTnewLM_310009900.1:CDS:1;Parent=LTnewLM_310009900.1 ### LTnewLM_31 . polypeptide 157809 158180 . - . ID=LTnewLM_310009900.1:pep;Derives_from=LTnewLM_310009900.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_340018100.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 159767 160356 652 - . ID=LTnewLM_310010000:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.08.0750:mRNA 1 196;original_prot_length=205 LTnewLM_31 . pseudogenic_transcript 159767 160356 . - . ID=LTnewLM_310010000.1;Parent=LTnewLM_310010000:pseudogene LTnewLM_31 . pseudogenic_exon 159767 159916 . - . ID=LTnewLM_310010000.1:pseudogenic_exon:1;Parent=LTnewLM_310010000.1 LTnewLM_31 . pseudogenic_exon 159919 160356 . - . ID=LTnewLM_310010000.1:pseudogenic_exon:2;Parent=LTnewLM_310010000.1 ### LTnewLM_31 . polypeptide 159767 160356 . - . ID=LTnewLM_310010000.1:pep;Derives_from=LTnewLM_310010000.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010100.1,LTnewLM_310010300.1,LTnewLM_310010400.1,LTnewLM_310010500.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_31 Pfam protein_match 159850 160314 . - . Parent=LTnewLM_310010000.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_31 Liftoff gene 165899 166497 . - . ID=LTnewLM_310010100;coverage=0.988;sequence_ID=0.858;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0450_0 LTnewLM_31 Liftoff mRNA 165899 166497 . - . ID=LTnewLM_310010100.1;Parent=LTnewLM_310010100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 165899 166497 . - 0 ID=LTnewLM_310010100.1:CDS:1;Parent=LTnewLM_310010100.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 165899 166497 . - . ID=LTnewLM_310010100.1:pep;Derives_from=LTnewLM_310010100.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010000.1,LTnewLM_310010300.1,LTnewLM_310010400.1,LTnewLM_310010500.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_31 Pfam protein_match 165991 166455 . - . Parent=LTnewLM_310010100.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_31 AUGUSTUS gene 167878 168900 0.91 - . ID=LTnewLM_310010200 LTnewLM_31 AUGUSTUS mRNA 167878 168900 0.91 - . ID=LTnewLM_310010200.1;Parent=LTnewLM_310010200 LTnewLM_31 AUGUSTUS CDS 167878 168900 0.91 - 0 ID=LTnewLM_310010200.1:CDS:1;Parent=LTnewLM_310010200.1 ### LTnewLM_31 . polypeptide 167878 168900 . - . ID=LTnewLM_310010200.1:pep;Derives_from=LTnewLM_310010200.1;orthologous_to=LTnewLM_080012100.1,LTnewLM_290036300.1,LTnewLM_310010600.1,LTnewLM_340010700.1,LTnewLM_340033900.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 172029 172631 0.7 - . ID=LTnewLM_310010300 LTnewLM_31 AUGUSTUS mRNA 172029 172631 0.7 - . ID=LTnewLM_310010300.1;Parent=LTnewLM_310010300 LTnewLM_31 AUGUSTUS CDS 172029 172479 0.7 - 1 ID=LTnewLM_310010300.1:CDS:1;Parent=LTnewLM_310010300.1 LTnewLM_31 AUGUSTUS CDS 172546 172631 0.85 - 0 ID=LTnewLM_310010300.1:CDS:2;Parent=LTnewLM_310010300.1 ### LTnewLM_31 . polypeptide 172029 172631 . - . ID=LTnewLM_310010300.1:pep;Derives_from=LTnewLM_310010300.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010000.1,LTnewLM_310010100.1,LTnewLM_310010400.1,LTnewLM_310010500.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_31 Pfam protein_match 172185 172511 . - . Parent=LTnewLM_310010300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_31 . pseudogene 178090 178675 669 - . ID=LTnewLM_310010400:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.08.0730:mRNA 1 193;original_prot_length=205 LTnewLM_31 . pseudogenic_transcript 178090 178675 . - . ID=LTnewLM_310010400.1;Parent=LTnewLM_310010400:pseudogene LTnewLM_31 . pseudogenic_exon 178090 178245 . - . ID=LTnewLM_310010400.1:pseudogenic_exon:1;Parent=LTnewLM_310010400.1 LTnewLM_31 . pseudogenic_exon 178248 178538 . - . ID=LTnewLM_310010400.1:pseudogenic_exon:2;Parent=LTnewLM_310010400.1 LTnewLM_31 . pseudogenic_exon 178541 178675 . - . ID=LTnewLM_310010400.1:pseudogenic_exon:3;Parent=LTnewLM_310010400.1 ### LTnewLM_31 . polypeptide 178090 178675 . - . ID=LTnewLM_310010400.1:pep;Derives_from=LTnewLM_310010400.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010000.1,LTnewLM_310010100.1,LTnewLM_310010300.1,LTnewLM_310010500.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_31 Pfam protein_match 178166 178633 . - . Parent=LTnewLM_310010400.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_31 . pseudogene 184221 184801 659 - . ID=LTnewLM_310010500:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.08.0730:mRNA 1 193;original_prot_length=205 LTnewLM_31 . pseudogenic_transcript 184221 184801 . - . ID=LTnewLM_310010500.1;Parent=LTnewLM_310010500:pseudogene LTnewLM_31 . pseudogenic_exon 184221 184364 . - . ID=LTnewLM_310010500.1:pseudogenic_exon:1;Parent=LTnewLM_310010500.1 LTnewLM_31 . pseudogenic_exon 184366 184632 . - . ID=LTnewLM_310010500.1:pseudogenic_exon:2;Parent=LTnewLM_310010500.1 LTnewLM_31 . pseudogenic_exon 184635 184688 . - . ID=LTnewLM_310010500.1:pseudogenic_exon:3;Parent=LTnewLM_310010500.1 LTnewLM_31 . pseudogenic_exon 184691 184801 . - . ID=LTnewLM_310010500.1:pseudogenic_exon:4;Parent=LTnewLM_310010500.1 ### LTnewLM_31 . polypeptide 184221 184801 . - . ID=LTnewLM_310010500.1:pep;Derives_from=LTnewLM_310010500.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010000.1,LTnewLM_310010100.1,LTnewLM_310010300.1,LTnewLM_310010400.1,LTnewLM_340018400.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_31 Pfam protein_match 184298 184759 . - . Parent=LTnewLM_310010500.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_31 AUGUSTUS gene 186492 187367 0.93 - . ID=LTnewLM_310010600 LTnewLM_31 AUGUSTUS mRNA 186492 187367 0.93 - . ID=LTnewLM_310010600.1;Parent=LTnewLM_310010600 LTnewLM_31 AUGUSTUS CDS 186492 187367 0.93 - 0 ID=LTnewLM_310010600.1:CDS:1;Parent=LTnewLM_310010600.1 ### LTnewLM_31 . polypeptide 186492 187367 . - . ID=LTnewLM_310010600.1:pep;Derives_from=LTnewLM_310010600.1;orthologous_to=LTnewLM_080012100.1,LTnewLM_290036300.1,LTnewLM_310010200.1,LTnewLM_340010700.1,LTnewLM_340033900.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 187801 188280 1 - . ID=LTnewLM_310010700 LTnewLM_31 AUGUSTUS mRNA 187801 188280 1 - . ID=LTnewLM_310010700.1;Parent=LTnewLM_310010700 LTnewLM_31 AUGUSTUS CDS 187801 188280 1 - 0 ID=LTnewLM_310010700.1:CDS:1;Parent=LTnewLM_310010700.1 ### LTnewLM_31 . polypeptide 187801 188280 . - . ID=LTnewLM_310010700.1:pep;Derives_from=LTnewLM_310010700.1;orthologous_to=LTnewLM_340024100.1,LTnewLM_340024100.2,LTnewLM_340024100.3;ortholog_cluster=OG0000218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 189132 191255 . - . ID=LTnewLM_310010800.1:pep;Derives_from=LTnewLM_310010800.1;orthologous_to=LTnewLM_310010800.2,LmjF.31.0460.1_mRNA,LmjF.31.0460.2_mRNA;ortholog_cluster=OG0000219;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 189753 190727 . - . Parent=LTnewLM_310010800.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 190923 191174 . - . Parent=LTnewLM_310010800.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 . polypeptide 189132 191330 . - . ID=LTnewLM_310010800.2:pep;Derives_from=LTnewLM_310010800.2;orthologous_to=LTnewLM_310010800.1,LmjF.31.0460.1_mRNA,LmjF.31.0460.2_mRNA;ortholog_cluster=OG0000219;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_31 Pfam protein_match 189753 190727 . - . Parent=LTnewLM_310010800.2:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_31 Pfam protein_match 190923 191174 . - . Parent=LTnewLM_310010800.2:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_31 Liftoff gene 189132 192553 . - . ID=LTnewLM_310010800;coverage=0.996;sequence_ID=0.935;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.0460_0 LTnewLM_31 Liftoff mRNA 189132 191276 . - . ID=LTnewLM_310010800.1;Parent=LTnewLM_310010800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 189132 191255 . - 0 ID=LTnewLM_310010800.1:CDS:1;Parent=LTnewLM_310010800.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 191256 191276 . - . ID=LTnewLM_310010800:five_prime_UTR;Parent=LTnewLM_310010800.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 189132 192553 . - . ID=LTnewLM_310010800.2;Parent=LTnewLM_310010800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 189132 191330 . - 0 ID=LTnewLM_310010800.2:CDS:1;Parent=LTnewLM_310010800.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 191331 192553 . - . ID=LTnewLM_310010800:five_prime_UTR.1;Parent=LTnewLM_310010800.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 193045 193773 1 - . ID=LTnewLM_310010900 LTnewLM_31 AUGUSTUS mRNA 193045 193773 1 - . ID=LTnewLM_310010900.1;Parent=LTnewLM_310010900 LTnewLM_31 AUGUSTUS CDS 193045 193773 1 - 0 ID=LTnewLM_310010900.1:CDS:1;Parent=LTnewLM_310010900.1 ### LTnewLM_31 . polypeptide 193045 193773 . - . ID=LTnewLM_310010900.1:pep;Derives_from=LTnewLM_310010900.1;orthologous_to=LmjF.31.0470_mRNA;ortholog_cluster=OG0004423;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 195812 196966 1 - . ID=LTnewLM_310011000 LTnewLM_31 AUGUSTUS mRNA 195812 196966 1 - . ID=LTnewLM_310011000.1;Parent=LTnewLM_310011000 LTnewLM_31 AUGUSTUS CDS 195812 196966 1 - 0 ID=LTnewLM_310011000.1:CDS:1;Parent=LTnewLM_310011000.1 ### LTnewLM_31 . polypeptide 195812 196966 . - . ID=LTnewLM_310011000.1:pep;Derives_from=LTnewLM_310011000.1;orthologous_to=LmjF.31.0480_mRNA;ortholog_cluster=OG0004424;product=term%3DSulfotransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17784 LTnewLM_31 Pfam protein_match 196106 196936 . - . Parent=LTnewLM_310011000.1:pep;Name=PF17784;signature_desc=Sulfotransferase domain ### LTnewLM_31 AUGUSTUS gene 197881 200349 1 - . ID=LTnewLM_310011100 LTnewLM_31 AUGUSTUS mRNA 197881 200349 1 - . ID=LTnewLM_310011100.1;Parent=LTnewLM_310011100 LTnewLM_31 AUGUSTUS CDS 197881 200349 1 - 0 ID=LTnewLM_310011100.1:CDS:1;Parent=LTnewLM_310011100.1 ### LTnewLM_31 . polypeptide 197881 200349 . - . ID=LTnewLM_310011100.1:pep;Derives_from=LTnewLM_310011100.1;orthologous_to=LmjF.31.0490_mRNA;ortholog_cluster=OG0004425;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_31 Pfam protein_match 198361 198588 . - . Parent=LTnewLM_310011100.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_31 AUGUSTUS gene 203761 205680 1 - . ID=LTnewLM_310011200 LTnewLM_31 AUGUSTUS mRNA 203761 205680 1 - . ID=LTnewLM_310011200.1;Parent=LTnewLM_310011200 LTnewLM_31 AUGUSTUS CDS 203761 205680 1 - 0 ID=LTnewLM_310011200.1:CDS:1;Parent=LTnewLM_310011200.1 ### LTnewLM_31 . polypeptide 203761 205680 . - . ID=LTnewLM_310011200.1:pep;Derives_from=LTnewLM_310011200.1;orthologous_to=LmjF.31.0500_mRNA;ortholog_cluster=OG0004426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 206818 208629 1 - . ID=LTnewLM_310011300 LTnewLM_31 AUGUSTUS mRNA 206818 208629 1 - . ID=LTnewLM_310011300.1;Parent=LTnewLM_310011300 LTnewLM_31 AUGUSTUS CDS 206818 208629 1 - 0 ID=LTnewLM_310011300.1:CDS:1;Parent=LTnewLM_310011300.1 ### LTnewLM_31 . polypeptide 206818 208629 . - . ID=LTnewLM_310011300.1:pep;Derives_from=LTnewLM_310011300.1;orthologous_to=LmjF.31.0510_mRNA;ortholog_cluster=OG0004427;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_31 Pfam protein_match 207583 207768 . - . Parent=LTnewLM_310011300.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_31 AUGUSTUS gene 209322 211016 1 - . ID=LTnewLM_310011400 LTnewLM_31 AUGUSTUS mRNA 209322 211016 1 - . ID=LTnewLM_310011400.1;Parent=LTnewLM_310011400 LTnewLM_31 AUGUSTUS CDS 209322 211016 1 - 0 ID=LTnewLM_310011400.1:CDS:1;Parent=LTnewLM_310011400.1 ### LTnewLM_31 . polypeptide 209322 211016 . - . ID=LTnewLM_310011400.1:pep;Derives_from=LTnewLM_310011400.1;orthologous_to=LmjF.31.0520_mRNA;ortholog_cluster=OG0004428;product=term%3DCCCH zinc finger in TRM13 protein/U11-48K-like CHHC zinc finger/Methyltransferase TRM13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11722|Pfam:PF05253|Pfam:PF05206;Ontology_term=GO:0008033,GO:0008168 LTnewLM_31 Pfam protein_match 209340 209480 . - . Parent=LTnewLM_310011400.1:pep;Name=PF05206;signature_desc=Methyltransferase TRM13;Ontology_term=GO:0008168,GO:0008033 LTnewLM_31 Pfam protein_match 209493 210212 . - . Parent=LTnewLM_310011400.1:pep;Name=PF05206;signature_desc=Methyltransferase TRM13;Ontology_term=GO:0008168,GO:0008033 LTnewLM_31 Pfam protein_match 210675 210746 . - . Parent=LTnewLM_310011400.1:pep;Name=PF05253;signature_desc=U11-48K-like CHHC zinc finger LTnewLM_31 Pfam protein_match 210849 210926 . - . Parent=LTnewLM_310011400.1:pep;Name=PF11722;signature_desc=CCCH zinc finger in TRM13 protein;Ontology_term=GO:0008168 ### LTnewLM_31 AUGUSTUS gene 216881 218917 1 - . ID=LTnewLM_310011500 LTnewLM_31 AUGUSTUS mRNA 216881 218917 1 - . ID=LTnewLM_310011500.1;Parent=LTnewLM_310011500 LTnewLM_31 AUGUSTUS CDS 216881 218917 1 - 0 ID=LTnewLM_310011500.1:CDS:1;Parent=LTnewLM_310011500.1 ### LTnewLM_31 . polypeptide 216881 218917 . - . ID=LTnewLM_310011500.1:pep;Derives_from=LTnewLM_310011500.1;orthologous_to=LmjF.31.0530_mRNA;ortholog_cluster=OG0004429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 222170 224689 1 - . ID=LTnewLM_310011600 LTnewLM_31 AUGUSTUS mRNA 222170 224689 1 - . ID=LTnewLM_310011600.1;Parent=LTnewLM_310011600 LTnewLM_31 AUGUSTUS CDS 222170 224689 1 - 0 ID=LTnewLM_310011600.1:CDS:1;Parent=LTnewLM_310011600.1 ### LTnewLM_31 . polypeptide 222170 224689 . - . ID=LTnewLM_310011600.1:pep;Derives_from=LTnewLM_310011600.1;orthologous_to=LmjF.31.0540_mRNA;ortholog_cluster=OG0004430;product=term%3DABC transporter transmembrane region 2/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06472|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_31 Pfam protein_match 222701 223117 . - . Parent=LTnewLM_310011600.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 223505 224302 . - . Parent=LTnewLM_310011600.1:pep;Name=PF06472;signature_desc=ABC transporter transmembrane region 2;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_31 . pseudogene 226136 229942 . - . ID=LTnewLM_310011700:pseudogene;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0550_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 226136 229942 . - . ID=LTnewLM_310011700.1;Parent=LTnewLM_310011700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 226136 229942 . - . ID=LTnewLM_310011700.1:pseudogenic_exon:1;Parent=LTnewLM_310011700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 226136 229942 . - . ID=LTnewLM_310011700.1:pep;Derives_from=LTnewLM_310011700.1;orthologous_to=LmjF.31.0550_mRNA;ortholog_cluster=OG0007598;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 230728 231717 1 - . ID=LTnewLM_310011800 LTnewLM_31 AUGUSTUS mRNA 230728 231717 1 - . ID=LTnewLM_310011800.1;Parent=LTnewLM_310011800 LTnewLM_31 AUGUSTUS CDS 230728 231717 1 - 0 ID=LTnewLM_310011800.1:CDS:1;Parent=LTnewLM_310011800.1 ### LTnewLM_31 . polypeptide 230728 231717 . - . ID=LTnewLM_310011800.1:pep;Derives_from=LTnewLM_310011800.1;orthologous_to=LmjF.31.0560_mRNA;ortholog_cluster=OG0004431;product=term%3DGHMP kinases N terminal domain/GHMP kinases C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00288|Pfam:PF08544;Ontology_term=GO:0005524 LTnewLM_31 Pfam protein_match 230788 231030 . - . Parent=LTnewLM_310011800.1:pep;Name=PF08544;signature_desc=GHMP kinases C terminal LTnewLM_31 Pfam protein_match 231232 231405 . - . Parent=LTnewLM_310011800.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 ### LTnewLM_31 AUGUSTUS gene 233199 234617 1 - . ID=LTnewLM_310011900 LTnewLM_31 AUGUSTUS mRNA 233199 234617 1 - . ID=LTnewLM_310011900.1;Parent=LTnewLM_310011900 LTnewLM_31 AUGUSTUS CDS 233199 234617 1 - 0 ID=LTnewLM_310011900.1:CDS:1;Parent=LTnewLM_310011900.1 ### LTnewLM_31 . polypeptide 233199 234617 . - . ID=LTnewLM_310011900.1:pep;Derives_from=LTnewLM_310011900.1;orthologous_to=LmjF.31.0570_mRNA;ortholog_cluster=OG0004432;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_31 Pfam protein_match 233223 234395 . - . Parent=LTnewLM_310011900.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 233898 234392 . - . Parent=LTnewLM_310011900.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 GenomeTools gene 235183 235329 85.4 - . ID=LTnewLM_310012000 LTnewLM_31 INFERNAL snRNA 235183 235329 85.4 - . ID=LTnewLM_310012000:snRNA;Parent=LTnewLM_310012000;gc=0.41;evalue=2.2e-24;score=85.4;model_name=U2;model_acc=RF00004;model_range=1-192 ### LTnewLM_31 Aragorn_1.2.36 gene 235541 235613 . + . ID=LTnewLM_310012100 LTnewLM_31 Aragorn_1.2.36 tRNA 235541 235613 . + . ID=LTnewLM_310012100:tRNA;Parent=LTnewLM_310012100;aa=Ala;anticodon=agc;gc_content=53.4 ### LTnewLM_31 AUGUSTUS gene 239145 240770 1 - . ID=LTnewLM_310012200 LTnewLM_31 AUGUSTUS mRNA 239145 240770 1 - . ID=LTnewLM_310012200.1;Parent=LTnewLM_310012200 LTnewLM_31 AUGUSTUS CDS 239145 240770 1 - 0 ID=LTnewLM_310012200.1:CDS:1;Parent=LTnewLM_310012200.1 ### LTnewLM_31 . polypeptide 239145 240770 . - . ID=LTnewLM_310012200.1:pep;Derives_from=LTnewLM_310012200.1;orthologous_to=LmjF.31.0580_mRNA;ortholog_cluster=OG0004433;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_31 Pfam protein_match 239187 240353 . - . Parent=LTnewLM_310012200.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_31 AUGUSTUS gene 241974 242798 1 - . ID=LTnewLM_310012300 LTnewLM_31 AUGUSTUS mRNA 241974 242798 1 - . ID=LTnewLM_310012300.1;Parent=LTnewLM_310012300 LTnewLM_31 AUGUSTUS CDS 241974 242798 1 - 0 ID=LTnewLM_310012300.1:CDS:1;Parent=LTnewLM_310012300.1 ### LTnewLM_31 . polypeptide 241974 242798 . - . ID=LTnewLM_310012300.1:pep;Derives_from=LTnewLM_310012300.1;orthologous_to=LmjF.31.0590_mRNA;ortholog_cluster=OG0004434;product=term%3DFatty acid hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04116;Ontology_term=GO:0055114,GO:0005506,GO:0006633,GO:0016491 LTnewLM_31 Pfam protein_match 242037 242435 . - . Parent=LTnewLM_310012300.1:pep;Name=PF04116;signature_desc=Fatty acid hydroxylase;Ontology_term=GO:0005506,GO:0016491,GO:0006633,GO:0055114 ### LTnewLM_31 AUGUSTUS gene 243371 244747 1 - . ID=LTnewLM_310012400 LTnewLM_31 AUGUSTUS mRNA 243371 244747 1 - . ID=LTnewLM_310012400.1;Parent=LTnewLM_310012400 LTnewLM_31 AUGUSTUS CDS 243371 244747 1 - 0 ID=LTnewLM_310012400.1:CDS:1;Parent=LTnewLM_310012400.1 ### LTnewLM_31 . polypeptide 243371 244747 . - . ID=LTnewLM_310012400.1:pep;Derives_from=LTnewLM_310012400.1;orthologous_to=LmjF.31.0600_mRNA;ortholog_cluster=OG0004435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 245221 246903 1 - . ID=LTnewLM_310012500 LTnewLM_31 AUGUSTUS mRNA 245221 246903 1 - . ID=LTnewLM_310012500.1;Parent=LTnewLM_310012500 LTnewLM_31 AUGUSTUS CDS 245221 246903 1 - 0 ID=LTnewLM_310012500.1:CDS:1;Parent=LTnewLM_310012500.1 ### LTnewLM_31 . polypeptide 245221 246903 . - . ID=LTnewLM_310012500.1:pep;Derives_from=LTnewLM_310012500.1;orthologous_to=LmjF.31.0610_mRNA;ortholog_cluster=OG0004436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 247350 249800 1 - . ID=LTnewLM_310012600 LTnewLM_31 AUGUSTUS mRNA 247350 249800 1 - . ID=LTnewLM_310012600.1;Parent=LTnewLM_310012600 LTnewLM_31 AUGUSTUS CDS 247350 249800 1 - 0 ID=LTnewLM_310012600.1:CDS:1;Parent=LTnewLM_310012600.1 ### LTnewLM_31 . polypeptide 247350 249800 . - . ID=LTnewLM_310012600.1:pep;Derives_from=LTnewLM_310012600.1;orthologous_to=LmjF.31.0620_mRNA;ortholog_cluster=OG0004437;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 250325 253361 . - . ID=LTnewLM_310012700:pseudogene;coverage=1.0;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0630_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 250325 253361 . - . ID=LTnewLM_310012700.1;Parent=LTnewLM_310012700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 250325 253361 . - . ID=LTnewLM_310012700.1:pseudogenic_exon:1;Parent=LTnewLM_310012700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 250325 253361 . - . ID=LTnewLM_310012700.1:pep;Derives_from=LTnewLM_310012700.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 253829 256603 1 - . ID=LTnewLM_310012800 LTnewLM_31 AUGUSTUS mRNA 253829 256603 1 - . ID=LTnewLM_310012800.1;Parent=LTnewLM_310012800 LTnewLM_31 AUGUSTUS CDS 253829 256603 1 - 0 ID=LTnewLM_310012800.1:CDS:1;Parent=LTnewLM_310012800.1 ### LTnewLM_31 . polypeptide 253829 256603 . - . ID=LTnewLM_310012800.1:pep;Derives_from=LTnewLM_310012800.1;orthologous_to=LmjF.31.0640_mRNA;ortholog_cluster=OG0004438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 257284 258291 1 - . ID=LTnewLM_310012900 LTnewLM_31 AUGUSTUS mRNA 257284 258291 1 - . ID=LTnewLM_310012900.1;Parent=LTnewLM_310012900 LTnewLM_31 AUGUSTUS CDS 257284 258291 1 - 0 ID=LTnewLM_310012900.1:CDS:1;Parent=LTnewLM_310012900.1 ### LTnewLM_31 . polypeptide 257284 258291 . - . ID=LTnewLM_310012900.1:pep;Derives_from=LTnewLM_310012900.1;orthologous_to=LmjF.31.0650_mRNA;ortholog_cluster=OG0004439;product=term%3DFtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_31 Pfam protein_match 257548 258288 . - . Parent=LTnewLM_310012900.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_31 AUGUSTUS gene 259491 265258 0.42 - . ID=LTnewLM_310013000 LTnewLM_31 AUGUSTUS mRNA 259491 265258 0.42 - . ID=LTnewLM_310013000.1;Parent=LTnewLM_310013000 LTnewLM_31 AUGUSTUS CDS 259491 262342 0.42 - 2 ID=LTnewLM_310013000.1:CDS:1;Parent=LTnewLM_310013000.1 LTnewLM_31 AUGUSTUS CDS 262393 265258 0.6 - 0 ID=LTnewLM_310013000.1:CDS:2;Parent=LTnewLM_310013000.1 ### LTnewLM_31 . polypeptide 259491 265258 . - . ID=LTnewLM_310013000.1:pep;Derives_from=LTnewLM_310013000.1;orthologous_to=LmjF.31.0660_mRNA;ortholog_cluster=OG0004440;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 267531 271124 1 - . ID=LTnewLM_310013100 LTnewLM_31 AUGUSTUS mRNA 267531 271124 1 - . ID=LTnewLM_310013100.1;Parent=LTnewLM_310013100 LTnewLM_31 AUGUSTUS CDS 267531 271124 1 - 0 ID=LTnewLM_310013100.1:CDS:1;Parent=LTnewLM_310013100.1 ### LTnewLM_31 . polypeptide 267531 271124 . - . ID=LTnewLM_310013100.1:pep;Derives_from=LTnewLM_310013100.1;orthologous_to=LmjF.31.0670_mRNA;ortholog_cluster=OG0004441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 272697 273545 1 - . ID=LTnewLM_310013200 LTnewLM_31 AUGUSTUS mRNA 272697 273545 1 - . ID=LTnewLM_310013200.1;Parent=LTnewLM_310013200 LTnewLM_31 AUGUSTUS CDS 272697 273545 1 - 0 ID=LTnewLM_310013200.1:CDS:1;Parent=LTnewLM_310013200.1 ### LTnewLM_31 . polypeptide 272697 273545 . - . ID=LTnewLM_310013200.1:pep;Derives_from=LTnewLM_310013200.1;orthologous_to=LmjF.31.0680_mRNA;ortholog_cluster=OG0004442;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 273246 273542 . - . Parent=LTnewLM_310013200.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 274346 275785 1 - . ID=LTnewLM_310013300 LTnewLM_31 AUGUSTUS mRNA 274346 275785 1 - . ID=LTnewLM_310013300.1;Parent=LTnewLM_310013300 LTnewLM_31 AUGUSTUS CDS 274346 275785 1 - 0 ID=LTnewLM_310013300.1:CDS:1;Parent=LTnewLM_310013300.1 ### LTnewLM_31 . polypeptide 274346 275785 . - . ID=LTnewLM_310013300.1:pep;Derives_from=LTnewLM_310013300.1;orthologous_to=LmjF.31.0690_mRNA;ortholog_cluster=OG0004443;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 276429 279296 . - . ID=LTnewLM_310013400;coverage=1.0;sequence_ID=0.955;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.0700_0 LTnewLM_31 Liftoff mRNA 276429 279296 . - . ID=LTnewLM_310013400.1;Parent=LTnewLM_310013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 276429 279296 . - 0 ID=LTnewLM_310013400.1:CDS:1;Parent=LTnewLM_310013400.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 276429 279296 . - . ID=LTnewLM_310013400.1:pep;Derives_from=LTnewLM_310013400.1;orthologous_to=LmjF.31.0700_mRNA;ortholog_cluster=OG0004444;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862|Pfam:PF01434;Ontology_term=GO:0004222,GO:0006508,GO:0005524 LTnewLM_31 Pfam protein_match 276486 277013 . - . Parent=LTnewLM_310013400.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 LTnewLM_31 Pfam protein_match 277062 277163 . - . Parent=LTnewLM_310013400.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_31 Pfam protein_match 277581 277979 . - . Parent=LTnewLM_310013400.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_31 AUGUSTUS gene 285016 285405 1 - . ID=LTnewLM_310013500 LTnewLM_31 AUGUSTUS mRNA 285016 285405 1 - . ID=LTnewLM_310013500.1;Parent=LTnewLM_310013500 LTnewLM_31 AUGUSTUS CDS 285016 285405 1 - 0 ID=LTnewLM_310013500.1:CDS:1;Parent=LTnewLM_310013500.1 ### LTnewLM_31 . polypeptide 285016 285405 . - . ID=LTnewLM_310013500.1:pep;Derives_from=LTnewLM_310013500.1;orthologous_to=LmjF.31.0710_mRNA;ortholog_cluster=OG0004445;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 290015 292954 1 - . ID=LTnewLM_310013600 LTnewLM_31 AUGUSTUS mRNA 290015 292954 1 - . ID=LTnewLM_310013600.1;Parent=LTnewLM_310013600 LTnewLM_31 AUGUSTUS CDS 290015 292954 1 - 0 ID=LTnewLM_310013600.1:CDS:1;Parent=LTnewLM_310013600.1 ### LTnewLM_31 . polypeptide 290015 292954 . - . ID=LTnewLM_310013600.1:pep;Derives_from=LTnewLM_310013600.1;orthologous_to=LmjF.31.0720_mRNA;ortholog_cluster=OG0004446;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_31 Pfam protein_match 291701 292486 . - . Parent=LTnewLM_310013600.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 294924 295256 1 - . ID=LTnewLM_310013700 LTnewLM_31 AUGUSTUS mRNA 294924 295256 1 - . ID=LTnewLM_310013700.1;Parent=LTnewLM_310013700 LTnewLM_31 AUGUSTUS CDS 294924 295256 1 - 0 ID=LTnewLM_310013700.1:CDS:1;Parent=LTnewLM_310013700.1 ### LTnewLM_31 . polypeptide 294924 295256 . - . ID=LTnewLM_310013700.1:pep;Derives_from=LTnewLM_310013700.1;orthologous_to=LmjF.31.0730_mRNA;ortholog_cluster=OG0004447;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 296353 297312 . - . ID=LTnewLM_310013800;coverage=1.0;sequence_ID=0.937;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0740_0 LTnewLM_31 Liftoff mRNA 296353 297312 . - . ID=LTnewLM_310013800.1;Parent=LTnewLM_310013800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 296353 297312 . - 0 ID=LTnewLM_310013800.1:CDS:1;Parent=LTnewLM_310013800.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 296353 297312 . - . ID=LTnewLM_310013800.1:pep;Derives_from=LTnewLM_310013800.1;orthologous_to=LmjF.31.0740_mRNA;ortholog_cluster=OG0004448;product=term%3DTir chaperone protein (CesT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05932;Ontology_term=GO:0009405,GO:0005737,GO:0050708 LTnewLM_31 Pfam protein_match 296383 296739 . - . Parent=LTnewLM_310013800.1:pep;Name=PF05932;signature_desc=Tir chaperone protein (CesT) family;Ontology_term=GO:0009405,GO:0050708,GO:0005737 ### LTnewLM_31 AUGUSTUS gene 298427 298678 0.82 - . ID=LTnewLM_310013900 LTnewLM_31 AUGUSTUS mRNA 298427 298678 0.82 - . ID=LTnewLM_310013900.1;Parent=LTnewLM_310013900 LTnewLM_31 AUGUSTUS CDS 298427 298678 0.82 - 0 ID=LTnewLM_310013900.1:CDS:1;Parent=LTnewLM_310013900.1 ### LTnewLM_31 . polypeptide 298427 298678 . - . ID=LTnewLM_310013900.1:pep;Derives_from=LTnewLM_310013900.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 298753 299043 1 - . ID=LTnewLM_310014000 LTnewLM_31 AUGUSTUS mRNA 298753 299043 1 - . ID=LTnewLM_310014000.1;Parent=LTnewLM_310014000 LTnewLM_31 AUGUSTUS CDS 298753 299043 1 - 0 ID=LTnewLM_310014000.1:CDS:1;Parent=LTnewLM_310014000.1 ### LTnewLM_31 . polypeptide 298753 299043 . - . ID=LTnewLM_310014000.1:pep;Derives_from=LTnewLM_310014000.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 300232 301125 1 - . ID=LTnewLM_310014100 LTnewLM_31 AUGUSTUS mRNA 300232 301125 1 - . ID=LTnewLM_310014100.1;Parent=LTnewLM_310014100 LTnewLM_31 AUGUSTUS CDS 300232 301125 1 - 0 ID=LTnewLM_310014100.1:CDS:1;Parent=LTnewLM_310014100.1 ### LTnewLM_31 . polypeptide 300232 301125 . - . ID=LTnewLM_310014100.1:pep;Derives_from=LTnewLM_310014100.1;orthologous_to=LmjF.31.0750_mRNA;ortholog_cluster=OG0004449;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 305756 306658 1 - . ID=LTnewLM_310014200 LTnewLM_31 AUGUSTUS mRNA 305756 306658 1 - . ID=LTnewLM_310014200.1;Parent=LTnewLM_310014200 LTnewLM_31 AUGUSTUS CDS 305756 306658 1 - 0 ID=LTnewLM_310014200.1:CDS:1;Parent=LTnewLM_310014200.1 ### LTnewLM_31 . polypeptide 305756 306658 . - . ID=LTnewLM_310014200.1:pep;Derives_from=LTnewLM_310014200.1;orthologous_to=LmjF.31.0760_mRNA;ortholog_cluster=OG0004450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 311650 312989 1.9e+03 - . ID=LTnewLM_310014300:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.31.0850:mRNA 1 437;original_prot_length=437 LTnewLM_31 . pseudogenic_transcript 311650 312989 . - . ID=LTnewLM_310014300.1;Parent=LTnewLM_310014300:pseudogene LTnewLM_31 . pseudogenic_exon 311650 311730 . - . ID=LTnewLM_310014300.1:pseudogenic_exon:1;Parent=LTnewLM_310014300.1 LTnewLM_31 . pseudogenic_exon 311732 311989 . - . ID=LTnewLM_310014300.1:pseudogenic_exon:2;Parent=LTnewLM_310014300.1 LTnewLM_31 . pseudogenic_exon 311991 312989 . - . ID=LTnewLM_310014300.1:pseudogenic_exon:3;Parent=LTnewLM_310014300.1 ### LTnewLM_31 . polypeptide 311650 312989 . - . ID=LTnewLM_310014300.1:pep;Derives_from=LTnewLM_310014300.1;orthologous_to=LTnewLM_310015100.1,LmjF.31.0770_mRNA,LmjF.31.0850_mRNA;ortholog_cluster=OG0000291;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 313947 314771 1 - . ID=LTnewLM_310014400 LTnewLM_31 AUGUSTUS mRNA 313947 314771 1 - . ID=LTnewLM_310014400.1;Parent=LTnewLM_310014400 LTnewLM_31 AUGUSTUS CDS 313947 314771 1 - 0 ID=LTnewLM_310014400.1:CDS:1;Parent=LTnewLM_310014400.1 ### LTnewLM_31 . polypeptide 313947 314771 . - . ID=LTnewLM_310014400.1:pep;Derives_from=LTnewLM_310014400.1;orthologous_to=LmjF.31.0780_mRNA;ortholog_cluster=OG0004451;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 314460 314768 . - . Parent=LTnewLM_310014400.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 315813 316679 1 - . ID=LTnewLM_310014500 LTnewLM_31 AUGUSTUS mRNA 315813 316679 1 - . ID=LTnewLM_310014500.1;Parent=LTnewLM_310014500 LTnewLM_31 AUGUSTUS CDS 315813 316679 1 - 0 ID=LTnewLM_310014500.1:CDS:1;Parent=LTnewLM_310014500.1 ### LTnewLM_31 . polypeptide 315813 316679 . - . ID=LTnewLM_310014500.1:pep;Derives_from=LTnewLM_310014500.1;orthologous_to=LmjF.31.0790_mRNA;ortholog_cluster=OG0004452;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 316368 316676 . - . Parent=LTnewLM_310014500.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 321049 322998 1 - . ID=LTnewLM_310014600 LTnewLM_31 AUGUSTUS mRNA 321049 322998 1 - . ID=LTnewLM_310014600.1;Parent=LTnewLM_310014600 LTnewLM_31 AUGUSTUS CDS 321049 322998 1 - 0 ID=LTnewLM_310014600.1:CDS:1;Parent=LTnewLM_310014600.1 ### LTnewLM_31 . polypeptide 321049 322998 . - . ID=LTnewLM_310014600.1:pep;Derives_from=LTnewLM_310014600.1;orthologous_to=LmjF.31.0800_mRNA;ortholog_cluster=OG0004453;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 324319 326208 1 - . ID=LTnewLM_310014700 LTnewLM_31 AUGUSTUS mRNA 324319 326208 1 - . ID=LTnewLM_310014700.1;Parent=LTnewLM_310014700 LTnewLM_31 AUGUSTUS CDS 324319 326208 1 - 0 ID=LTnewLM_310014700.1:CDS:1;Parent=LTnewLM_310014700.1 ### LTnewLM_31 . polypeptide 324319 326208 . - . ID=LTnewLM_310014700.1:pep;Derives_from=LTnewLM_310014700.1;orthologous_to=LTnewLM_340036800.1,LmjF.31.0810_mRNA;ortholog_cluster=OG0000435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 328532 328801 . - . ID=LTnewLM_310014800.1:pep;Derives_from=LTnewLM_310014800.1;orthologous_to=LTnewLM_310014800.2,LmjF.31.0820_mRNA;ortholog_cluster=OG0000436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 328532 330029 1.12 - . ID=LTnewLM_310014800 LTnewLM_31 AUGUSTUS mRNA 328532 328801 0.98 - . ID=LTnewLM_310014800.1;Parent=LTnewLM_310014800 LTnewLM_31 AUGUSTUS CDS 328532 328801 0.98 - 0 ID=LTnewLM_310014800.1:CDS:1;Parent=LTnewLM_310014800.1 LTnewLM_31 AUGUSTUS mRNA 328532 330029 0.14 - . ID=LTnewLM_310014800.2;Parent=LTnewLM_310014800 LTnewLM_31 AUGUSTUS CDS 328532 328946 0.4 - 1 ID=LTnewLM_310014800.2:CDS:1;Parent=LTnewLM_310014800.2 LTnewLM_31 AUGUSTUS CDS 329860 330029 0.18 - 0 ID=LTnewLM_310014800.2:CDS:2;Parent=LTnewLM_310014800.2 ### LTnewLM_31 . polypeptide 328532 330029 . - . ID=LTnewLM_310014800.2:pep;Derives_from=LTnewLM_310014800.2;orthologous_to=LTnewLM_310014800.1,LmjF.31.0820_mRNA;ortholog_cluster=OG0000436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 331326 332252 1 - . ID=LTnewLM_310014900 LTnewLM_31 AUGUSTUS mRNA 331326 332252 1 - . ID=LTnewLM_310014900.1;Parent=LTnewLM_310014900 LTnewLM_31 AUGUSTUS CDS 331326 332252 1 - 0 ID=LTnewLM_310014900.1:CDS:1;Parent=LTnewLM_310014900.1 ### LTnewLM_31 . polypeptide 331326 332252 . - . ID=LTnewLM_310014900.1:pep;Derives_from=LTnewLM_310014900.1;orthologous_to=LmjF.31.0830_mRNA;ortholog_cluster=OG0004454;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_31 Pfam protein_match 331539 331967 . - . Parent=LTnewLM_310014900.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_31 . pseudogene 333847 334684 . - . ID=LTnewLM_310015000:pseudogene;coverage=0.997;sequence_ID=0.896;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0840_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 333847 334684 . - . ID=LTnewLM_310015000.1;Parent=LTnewLM_310015000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 333847 334684 . - . ID=LTnewLM_310015000.1:pseudogenic_exon:1;Parent=LTnewLM_310015000.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 333847 334684 . - . ID=LTnewLM_310015000.1:pep;Derives_from=LTnewLM_310015000.1;orthologous_to=LmjF.31.0840_mRNA;ortholog_cluster=OG0007599;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_31 Pfam protein_match 334118 334546 . - . Parent=LTnewLM_310015000.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_31 . pseudogene 338576 339908 2.03e+03 - . ID=LTnewLM_310015100:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.31.0850:mRNA 1 437;original_prot_length=437 LTnewLM_31 . pseudogenic_transcript 338576 339908 . - . ID=LTnewLM_310015100.1;Parent=LTnewLM_310015100:pseudogene LTnewLM_31 . pseudogenic_exon 338576 338650 . - . ID=LTnewLM_310015100.1:pseudogenic_exon:1;Parent=LTnewLM_310015100.1 LTnewLM_31 . pseudogenic_exon 338652 339908 . - . ID=LTnewLM_310015100.1:pseudogenic_exon:2;Parent=LTnewLM_310015100.1 ### LTnewLM_31 . polypeptide 338576 339908 . - . ID=LTnewLM_310015100.1:pep;Derives_from=LTnewLM_310015100.1;orthologous_to=LTnewLM_310014300.1,LmjF.31.0770_mRNA,LmjF.31.0850_mRNA;ortholog_cluster=OG0000291;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 345243 345575 1 - . ID=LTnewLM_310015200 LTnewLM_31 AUGUSTUS mRNA 345243 345575 1 - . ID=LTnewLM_310015200.1;Parent=LTnewLM_310015200 LTnewLM_31 AUGUSTUS CDS 345243 345575 1 - 0 ID=LTnewLM_310015200.1:CDS:1;Parent=LTnewLM_310015200.1 ### LTnewLM_31 . polypeptide 345243 345575 . - . ID=LTnewLM_310015200.1:pep;Derives_from=LTnewLM_310015200.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 346380 348209 1 - . ID=LTnewLM_310015300 LTnewLM_31 AUGUSTUS mRNA 346380 348209 1 - . ID=LTnewLM_310015300.1;Parent=LTnewLM_310015300 LTnewLM_31 AUGUSTUS CDS 346380 348209 1 - 0 ID=LTnewLM_310015300.1:CDS:1;Parent=LTnewLM_310015300.1 ### LTnewLM_31 . polypeptide 346380 348209 . - . ID=LTnewLM_310015300.1:pep;Derives_from=LTnewLM_310015300.1;orthologous_to=LmjF.31.0860_mRNA;ortholog_cluster=OG0004455;product=term%3DElongation factor Tu GTP binding domain/ADP-ribosylation factor family/Ras family/Ras of Complex%2C Roc%2C domain of DAPkinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF00025|Pfam:PF00071|Pfam:PF08477;Ontology_term=GO:0005525,GO:0005622,GO:0003924,GO:0007264 LTnewLM_31 Pfam protein_match 347376 347942 . - . Parent=LTnewLM_310015300.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_31 Pfam protein_match 347379 348101 . - . Parent=LTnewLM_310015300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_31 Pfam protein_match 347640 347948 . - . Parent=LTnewLM_310015300.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_31 Pfam protein_match 347664 347936 . - . Parent=LTnewLM_310015300.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_31 AUGUSTUS gene 352672 354114 1 - . ID=LTnewLM_310015400 LTnewLM_31 AUGUSTUS mRNA 352672 354114 1 - . ID=LTnewLM_310015400.1;Parent=LTnewLM_310015400 LTnewLM_31 AUGUSTUS CDS 352672 354114 1 - 0 ID=LTnewLM_310015400.1:CDS:1;Parent=LTnewLM_310015400.1 ### LTnewLM_31 . polypeptide 352672 354114 . - . ID=LTnewLM_310015400.1:pep;Derives_from=LTnewLM_310015400.1;orthologous_to=LTnewLM_310015500.1,LmjF.31.0870_mRNA,LmjF.31.0880_mRNA;ortholog_cluster=OG0000220;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_31 Pfam protein_match 352699 353871 . - . Parent=LTnewLM_310015400.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_31 AUGUSTUS gene 359633 361075 1 - . ID=LTnewLM_310015500 LTnewLM_31 AUGUSTUS mRNA 359633 361075 1 - . ID=LTnewLM_310015500.1;Parent=LTnewLM_310015500 LTnewLM_31 AUGUSTUS CDS 359633 361075 1 - 0 ID=LTnewLM_310015500.1:CDS:1;Parent=LTnewLM_310015500.1 ### LTnewLM_31 . polypeptide 359633 361075 . - . ID=LTnewLM_310015500.1:pep;Derives_from=LTnewLM_310015500.1;orthologous_to=LTnewLM_310015400.1,LmjF.31.0870_mRNA,LmjF.31.0880_mRNA;ortholog_cluster=OG0000220;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_31 Pfam protein_match 359657 360832 . - . Parent=LTnewLM_310015500.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_31 AUGUSTUS gene 362660 363136 1 - . ID=LTnewLM_310015600 LTnewLM_31 AUGUSTUS mRNA 362660 363136 1 - . ID=LTnewLM_310015600.1;Parent=LTnewLM_310015600 LTnewLM_31 AUGUSTUS CDS 362660 363136 1 - 0 ID=LTnewLM_310015600.1:CDS:1;Parent=LTnewLM_310015600.1 ### LTnewLM_31 . polypeptide 362660 363136 . - . ID=LTnewLM_310015600.1:pep;Derives_from=LTnewLM_310015600.1;orthologous_to=LmjF.31.0890_mRNA;ortholog_cluster=OG0004456;product=term%3DHemingway/CFA97%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13879 LTnewLM_31 Pfam protein_match 362780 363070 . - . Parent=LTnewLM_310015600.1:pep;Name=PF13879;signature_desc=Hemingway/CFA97 ### LTnewLM_31 AUGUSTUS gene 364753 364992 1 - . ID=LTnewLM_310015700 LTnewLM_31 AUGUSTUS mRNA 364753 364992 1 - . ID=LTnewLM_310015700.1;Parent=LTnewLM_310015700 LTnewLM_31 AUGUSTUS CDS 364753 364992 1 - 0 ID=LTnewLM_310015700.1:CDS:1;Parent=LTnewLM_310015700.1 ### LTnewLM_31 . polypeptide 364753 364992 . - . ID=LTnewLM_310015700.1:pep;Derives_from=LTnewLM_310015700.1;orthologous_to=LmjF.31.0900_mRNA;ortholog_cluster=OG0004457;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 369018 369518 . - . ID=LTnewLM_310015800:pseudogene;coverage=0.988;sequence_ID=0.844;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0910_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 369018 369518 . - . ID=LTnewLM_310015800.1;Parent=LTnewLM_310015800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 369018 369518 . - . ID=LTnewLM_310015800.1:pseudogenic_exon:1;Parent=LTnewLM_310015800.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 369018 369518 . - . ID=LTnewLM_310015800.1:pep;Derives_from=LTnewLM_310015800.1;orthologous_to=LmjF.31.0910_mRNA;ortholog_cluster=OG0007600;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 372719 374585 0.88 - . ID=LTnewLM_310015900 LTnewLM_31 AUGUSTUS mRNA 372719 374585 0.88 - . ID=LTnewLM_310015900.1;Parent=LTnewLM_310015900 LTnewLM_31 AUGUSTUS CDS 372719 374278 0.88 - 0 ID=LTnewLM_310015900.1:CDS:1;Parent=LTnewLM_310015900.1 LTnewLM_31 AUGUSTUS CDS 374322 374585 0.89 - 0 ID=LTnewLM_310015900.1:CDS:2;Parent=LTnewLM_310015900.1 ### LTnewLM_31 . polypeptide 372719 374585 . - . ID=LTnewLM_310015900.1:pep;Derives_from=LTnewLM_310015900.1;orthologous_to=LTnewLM_310016100.1,LTnewLM_310016300.1,LTnewLM_310016600.1,LTnewLM_310016800.1;ortholog_cluster=OG0000095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 376587 377511 1.31e+03 - . ID=LTnewLM_310016000:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.31.0940:mRNA 1 298;original_prot_length=304 LTnewLM_31 . pseudogenic_transcript 376587 377511 . - . ID=LTnewLM_310016000.1;Parent=LTnewLM_310016000:pseudogene LTnewLM_31 . pseudogenic_exon 376587 376910 . - . ID=LTnewLM_310016000.1:pseudogenic_exon:1;Parent=LTnewLM_310016000.1 LTnewLM_31 . pseudogenic_exon 376912 377004 . - . ID=LTnewLM_310016000.1:pseudogenic_exon:2;Parent=LTnewLM_310016000.1 LTnewLM_31 . pseudogenic_exon 377006 377125 . - . ID=LTnewLM_310016000.1:pseudogenic_exon:3;Parent=LTnewLM_310016000.1 LTnewLM_31 . pseudogenic_exon 377128 377511 . - . ID=LTnewLM_310016000.1:pseudogenic_exon:4;Parent=LTnewLM_310016000.1 ### LTnewLM_31 . polypeptide 376587 377511 . - . ID=LTnewLM_310016000.1:pep;Derives_from=LTnewLM_310016000.1;orthologous_to=LTnewLM_310016500.1,LmjF.31.0940_mRNA;ortholog_cluster=OG0000534;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 381282 383147 1 - . ID=LTnewLM_310016100 LTnewLM_31 AUGUSTUS mRNA 381282 383147 1 - . ID=LTnewLM_310016100.1;Parent=LTnewLM_310016100 LTnewLM_31 AUGUSTUS CDS 381282 383147 1 - 0 ID=LTnewLM_310016100.1:CDS:1;Parent=LTnewLM_310016100.1 ### LTnewLM_31 . polypeptide 381282 383147 . - . ID=LTnewLM_310016100.1:pep;Derives_from=LTnewLM_310016100.1;orthologous_to=LTnewLM_310015900.1,LTnewLM_310016300.1,LTnewLM_310016600.1,LTnewLM_310016800.1;ortholog_cluster=OG0000095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 384323 385288 1.56 - . ID=LTnewLM_310016200 LTnewLM_31 AUGUSTUS mRNA 384323 385288 0.57 - . ID=LTnewLM_310016200.1;Parent=LTnewLM_310016200 LTnewLM_31 AUGUSTUS CDS 384323 384571 0.74 - 0 ID=LTnewLM_310016200.1:CDS:1;Parent=LTnewLM_310016200.1 LTnewLM_31 AUGUSTUS CDS 384845 385288 0.6 - 0 ID=LTnewLM_310016200.1:CDS:2;Parent=LTnewLM_310016200.1 LTnewLM_31 AUGUSTUS mRNA 384623 385288 0.99 - . ID=LTnewLM_310016200.2;Parent=LTnewLM_310016200 LTnewLM_31 AUGUSTUS CDS 384623 385288 0.99 - 0 ID=LTnewLM_310016200.2:CDS:1;Parent=LTnewLM_310016200.2 ### LTnewLM_31 . polypeptide 384323 385288 . - . ID=LTnewLM_310016200.1:pep;Derives_from=LTnewLM_310016200.1;orthologous_to=LTnewLM_310016200.2,LTnewLM_310016400.1,LTnewLM_310016400.2,LTnewLM_310016700.1,LTnewLM_310016700.2;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 384623 385288 . - . ID=LTnewLM_310016200.2:pep;Derives_from=LTnewLM_310016200.2;orthologous_to=LTnewLM_310016200.1,LTnewLM_310016400.1,LTnewLM_310016400.2,LTnewLM_310016700.1,LTnewLM_310016700.2;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 389906 391772 . - . ID=LTnewLM_310016300:pseudogene;coverage=0.996;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.0960_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 389906 391772 . - . ID=LTnewLM_310016300.1;Parent=LTnewLM_310016300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 389906 391772 . - . ID=LTnewLM_310016300.1:pseudogenic_exon:1;Parent=LTnewLM_310016300.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 389906 391772 . - . ID=LTnewLM_310016300.1:pep;Derives_from=LTnewLM_310016300.1;orthologous_to=LTnewLM_310015900.1,LTnewLM_310016100.1,LTnewLM_310016600.1,LTnewLM_310016800.1;ortholog_cluster=OG0000095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 392951 393757 1.86 - . ID=LTnewLM_310016400 LTnewLM_31 AUGUSTUS mRNA 392951 393757 0.87 - . ID=LTnewLM_310016400.1;Parent=LTnewLM_310016400 LTnewLM_31 AUGUSTUS CDS 392951 393199 0.97 - 0 ID=LTnewLM_310016400.1:CDS:1;Parent=LTnewLM_310016400.1 LTnewLM_31 AUGUSTUS CDS 393452 393757 0.89 - 0 ID=LTnewLM_310016400.1:CDS:2;Parent=LTnewLM_310016400.1 LTnewLM_31 AUGUSTUS mRNA 393251 393757 0.99 - . ID=LTnewLM_310016400.2;Parent=LTnewLM_310016400 LTnewLM_31 AUGUSTUS CDS 393251 393757 0.99 - 0 ID=LTnewLM_310016400.2:CDS:1;Parent=LTnewLM_310016400.2 ### LTnewLM_31 . polypeptide 392951 393757 . - . ID=LTnewLM_310016400.1:pep;Derives_from=LTnewLM_310016400.1;orthologous_to=LTnewLM_310016200.1,LTnewLM_310016200.2,LTnewLM_310016400.2,LTnewLM_310016700.1,LTnewLM_310016700.2;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 393251 393757 . - . ID=LTnewLM_310016400.2:pep;Derives_from=LTnewLM_310016400.2;orthologous_to=LTnewLM_310016200.1,LTnewLM_310016200.2,LTnewLM_310016400.1,LTnewLM_310016700.1,LTnewLM_310016700.2;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 393893 394849 1.2e+03 - . ID=LTnewLM_310016500:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.31.0940:mRNA 1 292;original_prot_length=304 LTnewLM_31 . pseudogenic_transcript 393893 394849 . - . ID=LTnewLM_310016500.1;Parent=LTnewLM_310016500:pseudogene LTnewLM_31 . pseudogenic_exon 393893 393991 . - . ID=LTnewLM_310016500.1:pseudogenic_exon:1;Parent=LTnewLM_310016500.1 LTnewLM_31 . pseudogenic_exon 393994 394203 . - . ID=LTnewLM_310016500.1:pseudogenic_exon:2;Parent=LTnewLM_310016500.1 LTnewLM_31 . pseudogenic_exon 394205 394321 . - . ID=LTnewLM_310016500.1:pseudogenic_exon:3;Parent=LTnewLM_310016500.1 LTnewLM_31 . pseudogenic_exon 394366 394452 . - . ID=LTnewLM_310016500.1:pseudogenic_exon:4;Parent=LTnewLM_310016500.1 LTnewLM_31 . pseudogenic_exon 394454 394849 . - . ID=LTnewLM_310016500.1:pseudogenic_exon:5;Parent=LTnewLM_310016500.1 ### LTnewLM_31 . polypeptide 393893 394849 . - . ID=LTnewLM_310016500.1:pep;Derives_from=LTnewLM_310016500.1;orthologous_to=LTnewLM_310016000.1,LmjF.31.0940_mRNA;ortholog_cluster=OG0000534;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 397494 399359 1 - . ID=LTnewLM_310016600 LTnewLM_31 AUGUSTUS mRNA 397494 399359 1 - . ID=LTnewLM_310016600.1;Parent=LTnewLM_310016600 LTnewLM_31 AUGUSTUS CDS 397494 399359 1 - 0 ID=LTnewLM_310016600.1:CDS:1;Parent=LTnewLM_310016600.1 ### LTnewLM_31 . polypeptide 397494 399359 . - . ID=LTnewLM_310016600.1:pep;Derives_from=LTnewLM_310016600.1;orthologous_to=LTnewLM_310015900.1,LTnewLM_310016100.1,LTnewLM_310016300.1,LTnewLM_310016800.1;ortholog_cluster=OG0000095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 400535 401548 1.41 - . ID=LTnewLM_310016700 LTnewLM_31 AUGUSTUS mRNA 400535 401548 0.42 - . ID=LTnewLM_310016700.1;Parent=LTnewLM_310016700 LTnewLM_31 AUGUSTUS CDS 400535 400783 0.95 - 0 ID=LTnewLM_310016700.1:CDS:1;Parent=LTnewLM_310016700.1 LTnewLM_31 AUGUSTUS CDS 401231 401548 0.45 - 0 ID=LTnewLM_310016700.1:CDS:2;Parent=LTnewLM_310016700.1 LTnewLM_31 AUGUSTUS mRNA 401201 401548 0.99 - . ID=LTnewLM_310016700.2;Parent=LTnewLM_310016700 LTnewLM_31 AUGUSTUS CDS 401201 401548 0.99 - 0 ID=LTnewLM_310016700.2:CDS:1;Parent=LTnewLM_310016700.2 ### LTnewLM_31 . polypeptide 400535 401548 . - . ID=LTnewLM_310016700.1:pep;Derives_from=LTnewLM_310016700.1;orthologous_to=LTnewLM_310016200.1,LTnewLM_310016200.2,LTnewLM_310016400.1,LTnewLM_310016400.2,LTnewLM_310016700.2;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 401201 401548 . - . ID=LTnewLM_310016700.2:pep;Derives_from=LTnewLM_310016700.2;orthologous_to=LTnewLM_310016200.1,LTnewLM_310016200.2,LTnewLM_310016400.1,LTnewLM_310016400.2,LTnewLM_310016700.1;ortholog_cluster=OG0000065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 401576 402352 0.48 - . ID=LTnewLM_310016800 LTnewLM_31 AUGUSTUS mRNA 401576 402352 0.48 - . ID=LTnewLM_310016800.1;Parent=LTnewLM_310016800 LTnewLM_31 AUGUSTUS CDS 401576 401969 0.55 - 1 ID=LTnewLM_310016800.1:CDS:1;Parent=LTnewLM_310016800.1 LTnewLM_31 AUGUSTUS CDS 402273 402352 0.7 - 0 ID=LTnewLM_310016800.1:CDS:2;Parent=LTnewLM_310016800.1 ### LTnewLM_31 . polypeptide 401576 402352 . - . ID=LTnewLM_310016800.1:pep;Derives_from=LTnewLM_310016800.1;orthologous_to=LTnewLM_310015900.1,LTnewLM_310016100.1,LTnewLM_310016300.1,LTnewLM_310016600.1;ortholog_cluster=OG0000095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 404806 405045 1 - . ID=LTnewLM_310016900 LTnewLM_31 AUGUSTUS mRNA 404806 405045 1 - . ID=LTnewLM_310016900.1;Parent=LTnewLM_310016900 LTnewLM_31 AUGUSTUS CDS 404806 405045 1 - 0 ID=LTnewLM_310016900.1:CDS:1;Parent=LTnewLM_310016900.1 ### LTnewLM_31 . polypeptide 404806 405045 . - . ID=LTnewLM_310016900.1:pep;Derives_from=LTnewLM_310016900.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 405624 408305 1 - . ID=LTnewLM_310017000 LTnewLM_31 AUGUSTUS mRNA 405624 408305 1 - . ID=LTnewLM_310017000.1;Parent=LTnewLM_310017000 LTnewLM_31 AUGUSTUS CDS 405624 408305 1 - 0 ID=LTnewLM_310017000.1:CDS:1;Parent=LTnewLM_310017000.1 ### LTnewLM_31 . polypeptide 405624 408305 . - . ID=LTnewLM_310017000.1:pep;Derives_from=LTnewLM_310017000.1;orthologous_to=LmjF.31.0970_mRNA;ortholog_cluster=OG0004458;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 409529 411841 1 - . ID=LTnewLM_310017100 LTnewLM_31 AUGUSTUS mRNA 409529 411841 1 - . ID=LTnewLM_310017100.1;Parent=LTnewLM_310017100 LTnewLM_31 AUGUSTUS CDS 409529 411841 1 - 0 ID=LTnewLM_310017100.1:CDS:1;Parent=LTnewLM_310017100.1 ### LTnewLM_31 . polypeptide 409529 411841 . - . ID=LTnewLM_310017100.1:pep;Derives_from=LTnewLM_310017100.1;orthologous_to=LmjF.31.0980_mRNA;ortholog_cluster=OG0004459;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 412790 413992 1 - . ID=LTnewLM_310017200 LTnewLM_31 AUGUSTUS mRNA 412790 413992 1 - . ID=LTnewLM_310017200.1;Parent=LTnewLM_310017200 LTnewLM_31 AUGUSTUS CDS 412790 413992 1 - 0 ID=LTnewLM_310017200.1:CDS:1;Parent=LTnewLM_310017200.1 ### LTnewLM_31 . polypeptide 412790 413992 . - . ID=LTnewLM_310017200.1:pep;Derives_from=LTnewLM_310017200.1;orthologous_to=LmjF.31.0990_mRNA;ortholog_cluster=OG0004460;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 415142 418507 1 - . ID=LTnewLM_310017300 LTnewLM_31 AUGUSTUS mRNA 415142 418507 1 - . ID=LTnewLM_310017300.1;Parent=LTnewLM_310017300 LTnewLM_31 AUGUSTUS CDS 415142 418507 1 - 0 ID=LTnewLM_310017300.1:CDS:1;Parent=LTnewLM_310017300.1 ### LTnewLM_31 . polypeptide 415142 418507 . - . ID=LTnewLM_310017300.1:pep;Derives_from=LTnewLM_310017300.1;orthologous_to=LmjF.31.1000_mRNA;ortholog_cluster=OG0004461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 419350 421605 1 - . ID=LTnewLM_310017400 LTnewLM_31 AUGUSTUS mRNA 419350 421605 1 - . ID=LTnewLM_310017400.1;Parent=LTnewLM_310017400 LTnewLM_31 AUGUSTUS CDS 419350 421605 1 - 0 ID=LTnewLM_310017400.1:CDS:1;Parent=LTnewLM_310017400.1 ### LTnewLM_31 . polypeptide 419350 421605 . - . ID=LTnewLM_310017400.1:pep;Derives_from=LTnewLM_310017400.1;orthologous_to=LmjF.31.1010_mRNA;ortholog_cluster=OG0004462;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 425853 428693 1 - . ID=LTnewLM_310017500 LTnewLM_31 AUGUSTUS mRNA 425853 428693 1 - . ID=LTnewLM_310017500.1;Parent=LTnewLM_310017500 LTnewLM_31 AUGUSTUS CDS 425853 428693 1 - 0 ID=LTnewLM_310017500.1:CDS:1;Parent=LTnewLM_310017500.1 ### LTnewLM_31 . polypeptide 425853 428693 . - . ID=LTnewLM_310017500.1:pep;Derives_from=LTnewLM_310017500.1;orthologous_to=LmjF.31.1020_mRNA;ortholog_cluster=OG0004463;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 436929 439646 1 - . ID=LTnewLM_310017600 LTnewLM_31 AUGUSTUS mRNA 436929 439646 1 - . ID=LTnewLM_310017600.1;Parent=LTnewLM_310017600 LTnewLM_31 AUGUSTUS CDS 436929 439646 1 - 0 ID=LTnewLM_310017600.1:CDS:1;Parent=LTnewLM_310017600.1 ### LTnewLM_31 . polypeptide 436929 439646 . - . ID=LTnewLM_310017600.1:pep;Derives_from=LTnewLM_310017600.1;orthologous_to=LmjF.31.1030_mRNA;ortholog_cluster=OG0004464;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_31 Pfam protein_match 438864 439049 . - . Parent=LTnewLM_310017600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_31 AUGUSTUS gene 447611 449929 1 - . ID=LTnewLM_310017700 LTnewLM_31 AUGUSTUS mRNA 447611 449929 1 - . ID=LTnewLM_310017700.1;Parent=LTnewLM_310017700 LTnewLM_31 AUGUSTUS CDS 447611 449929 1 - 0 ID=LTnewLM_310017700.1:CDS:1;Parent=LTnewLM_310017700.1 ### LTnewLM_31 . polypeptide 447611 449929 . - . ID=LTnewLM_310017700.1:pep;Derives_from=LTnewLM_310017700.1;orthologous_to=LmjF.31.1040_mRNA;ortholog_cluster=OG0004465;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_31 Pfam protein_match 449525 449674 . - . Parent=LTnewLM_310017700.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_31 AUGUSTUS gene 452902 454056 1 - . ID=LTnewLM_310017800 LTnewLM_31 AUGUSTUS mRNA 452902 454056 1 - . ID=LTnewLM_310017800.1;Parent=LTnewLM_310017800 LTnewLM_31 AUGUSTUS CDS 452902 454056 1 - 0 ID=LTnewLM_310017800.1:CDS:1;Parent=LTnewLM_310017800.1 ### LTnewLM_31 . polypeptide 452902 454056 . - . ID=LTnewLM_310017800.1:pep;Derives_from=LTnewLM_310017800.1;orthologous_to=LmjF.31.1050_mRNA;ortholog_cluster=OG0004466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 455651 457870 0.95 - . ID=LTnewLM_310017900 LTnewLM_31 AUGUSTUS mRNA 455651 457870 0.95 - . ID=LTnewLM_310017900.1;Parent=LTnewLM_310017900 LTnewLM_31 AUGUSTUS CDS 455651 457870 0.95 - 0 ID=LTnewLM_310017900.1:CDS:1;Parent=LTnewLM_310017900.1 ### LTnewLM_31 . polypeptide 455651 457870 . - . ID=LTnewLM_310017900.1:pep;Derives_from=LTnewLM_310017900.1;orthologous_to=LmjF.31.1060_mRNA;ortholog_cluster=OG0004467;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 455867 457069 . - . Parent=LTnewLM_310017900.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 459158 459949 1 - . ID=LTnewLM_310018000 LTnewLM_31 AUGUSTUS mRNA 459158 459949 1 - . ID=LTnewLM_310018000.1;Parent=LTnewLM_310018000 LTnewLM_31 AUGUSTUS CDS 459158 459949 1 - 0 ID=LTnewLM_310018000.1:CDS:1;Parent=LTnewLM_310018000.1 ### LTnewLM_31 . polypeptide 459158 459949 . - . ID=LTnewLM_310018000.1:pep;Derives_from=LTnewLM_310018000.1;orthologous_to=LmjF.31.1070_mRNA;ortholog_cluster=OG0004468;product=term%3DBiotin/lipoate A/B protein ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03099;Ontology_term=GO:0006464 LTnewLM_31 Pfam protein_match 459503 459907 . - . Parent=LTnewLM_310018000.1:pep;Name=PF03099;signature_desc=Biotin/lipoate A/B protein ligase family;Ontology_term=GO:0006464 ### LTnewLM_31 AUGUSTUS gene 461063 463999 1 - . ID=LTnewLM_310018100 LTnewLM_31 AUGUSTUS mRNA 461063 463999 1 - . ID=LTnewLM_310018100.1;Parent=LTnewLM_310018100 LTnewLM_31 AUGUSTUS CDS 461063 463999 1 - 0 ID=LTnewLM_310018100.1:CDS:1;Parent=LTnewLM_310018100.1 ### LTnewLM_31 . polypeptide 461063 463999 . - . ID=LTnewLM_310018100.1:pep;Derives_from=LTnewLM_310018100.1;orthologous_to=LmjF.31.1080_mRNA;ortholog_cluster=OG0004469;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 466995 468911 1 - . ID=LTnewLM_310018200 LTnewLM_31 AUGUSTUS mRNA 466995 468911 1 - . ID=LTnewLM_310018200.1;Parent=LTnewLM_310018200 LTnewLM_31 AUGUSTUS CDS 466995 468911 1 - 0 ID=LTnewLM_310018200.1:CDS:1;Parent=LTnewLM_310018200.1 ### LTnewLM_31 . polypeptide 466995 468911 . - . ID=LTnewLM_310018200.1:pep;Derives_from=LTnewLM_310018200.1;orthologous_to=LmjF.31.1090_mRNA;ortholog_cluster=OG0004470;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 471767 472405 1 - . ID=LTnewLM_310018300 LTnewLM_31 AUGUSTUS mRNA 471767 472405 1 - . ID=LTnewLM_310018300.1;Parent=LTnewLM_310018300 LTnewLM_31 AUGUSTUS CDS 471767 472405 1 - 0 ID=LTnewLM_310018300.1:CDS:1;Parent=LTnewLM_310018300.1 ### LTnewLM_31 . polypeptide 471767 472405 . - . ID=LTnewLM_310018300.1:pep;Derives_from=LTnewLM_310018300.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 472604 472930 1 - . ID=LTnewLM_310018400 LTnewLM_31 AUGUSTUS mRNA 472604 472930 1 - . ID=LTnewLM_310018400.1;Parent=LTnewLM_310018400 LTnewLM_31 AUGUSTUS CDS 472604 472930 1 - 0 ID=LTnewLM_310018400.1:CDS:1;Parent=LTnewLM_310018400.1 ### LTnewLM_31 . polypeptide 472604 472930 . - . ID=LTnewLM_310018400.1:pep;Derives_from=LTnewLM_310018400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 474700 475845 1 - . ID=LTnewLM_310018500 LTnewLM_31 AUGUSTUS mRNA 474700 475845 1 - . ID=LTnewLM_310018500.1;Parent=LTnewLM_310018500 LTnewLM_31 AUGUSTUS CDS 474700 475845 1 - 0 ID=LTnewLM_310018500.1:CDS:1;Parent=LTnewLM_310018500.1 ### LTnewLM_31 . polypeptide 474700 475845 . - . ID=LTnewLM_310018500.1:pep;Derives_from=LTnewLM_310018500.1;orthologous_to=LmjF.31.1100_mRNA;ortholog_cluster=OG0004471;product=term%3DCilia- and flagella-associated protein 300%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14926 LTnewLM_31 Pfam protein_match 474712 475089 . - . Parent=LTnewLM_310018500.1:pep;Name=PF14926;signature_desc=Cilia- and flagella-associated protein 300 ### LTnewLM_31 AUGUSTUS gene 476606 477253 1 - . ID=LTnewLM_310018600 LTnewLM_31 AUGUSTUS mRNA 476606 477253 1 - . ID=LTnewLM_310018600.1;Parent=LTnewLM_310018600 LTnewLM_31 AUGUSTUS CDS 476606 477253 1 - 0 ID=LTnewLM_310018600.1:CDS:1;Parent=LTnewLM_310018600.1 ### LTnewLM_31 . polypeptide 476606 477253 . - . ID=LTnewLM_310018600.1:pep;Derives_from=LTnewLM_310018600.1;orthologous_to=LmjF.31.1110_mRNA;ortholog_cluster=OG0004472;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_31 Pfam protein_match 476627 477139 . - . Parent=LTnewLM_310018600.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 478216 478845 1 - . ID=LTnewLM_310018700 LTnewLM_31 AUGUSTUS mRNA 478216 478845 1 - . ID=LTnewLM_310018700.1;Parent=LTnewLM_310018700 LTnewLM_31 AUGUSTUS CDS 478216 478845 1 - 0 ID=LTnewLM_310018700.1:CDS:1;Parent=LTnewLM_310018700.1 ### LTnewLM_31 . polypeptide 478216 478845 . - . ID=LTnewLM_310018700.1:pep;Derives_from=LTnewLM_310018700.1;orthologous_to=LmjF.31.1120_mRNA;ortholog_cluster=OG0004473;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_31 Pfam protein_match 478240 478716 . - . Parent=LTnewLM_310018700.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 480770 481987 1 - . ID=LTnewLM_310018800 LTnewLM_31 AUGUSTUS mRNA 480770 481987 1 - . ID=LTnewLM_310018800.1;Parent=LTnewLM_310018800 LTnewLM_31 AUGUSTUS CDS 480770 481987 1 - 0 ID=LTnewLM_310018800.1:CDS:1;Parent=LTnewLM_310018800.1 ### LTnewLM_31 . polypeptide 480770 481987 . - . ID=LTnewLM_310018800.1:pep;Derives_from=LTnewLM_310018800.1;orthologous_to=LTnewLM_310018900.1,LmjF.31.1130_mRNA;ortholog_cluster=OG0000437;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 480791 481741 . - . Parent=LTnewLM_310018800.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 481121 481396 . - . Parent=LTnewLM_310018800.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_31 AUGUSTUS gene 484138 485355 1 - . ID=LTnewLM_310018900 LTnewLM_31 AUGUSTUS mRNA 484138 485355 1 - . ID=LTnewLM_310018900.1;Parent=LTnewLM_310018900 LTnewLM_31 AUGUSTUS CDS 484138 485355 1 - 0 ID=LTnewLM_310018900.1:CDS:1;Parent=LTnewLM_310018900.1 ### LTnewLM_31 . polypeptide 484138 485355 . - . ID=LTnewLM_310018900.1:pep;Derives_from=LTnewLM_310018900.1;orthologous_to=LTnewLM_310018800.1,LmjF.31.1130_mRNA;ortholog_cluster=OG0000437;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 484159 485109 . - . Parent=LTnewLM_310018900.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 484486 484767 . - . Parent=LTnewLM_310018900.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_31 AUGUSTUS gene 486295 486831 0.91 - . ID=LTnewLM_310019000 LTnewLM_31 AUGUSTUS mRNA 486295 486831 0.91 - . ID=LTnewLM_310019000.1;Parent=LTnewLM_310019000 LTnewLM_31 AUGUSTUS CDS 486295 486831 0.91 - 0 ID=LTnewLM_310019000.1:CDS:1;Parent=LTnewLM_310019000.1 ### LTnewLM_31 . polypeptide 486295 486831 . - . ID=LTnewLM_310019000.1:pep;Derives_from=LTnewLM_310019000.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 486886 487821 1 - . ID=LTnewLM_310019100 LTnewLM_31 AUGUSTUS mRNA 486886 487821 1 - . ID=LTnewLM_310019100.1;Parent=LTnewLM_310019100 LTnewLM_31 AUGUSTUS CDS 486886 487821 1 - 0 ID=LTnewLM_310019100.1:CDS:1;Parent=LTnewLM_310019100.1 ### LTnewLM_31 . polypeptide 486886 487821 . - . ID=LTnewLM_310019100.1:pep;Derives_from=LTnewLM_310019100.1;orthologous_to=LmjF.31.1140_mRNA;ortholog_cluster=OG0004474;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold/Alpha/beta hydrolase family/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561|Pfam:PF12697|Pfam:PF00326;Ontology_term=GO:0006508,GO:0008236 LTnewLM_31 Pfam protein_match 486901 487584 . - . Parent=LTnewLM_310019100.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 LTnewLM_31 Pfam protein_match 486949 487656 . - . Parent=LTnewLM_310019100.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_31 Pfam protein_match 486952 487641 . - . Parent=LTnewLM_310019100.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_31 Pfam protein_match 487252 487647 . - . Parent=LTnewLM_310019100.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold ### LTnewLM_31 AUGUSTUS gene 488499 491822 1 - . ID=LTnewLM_310019200 LTnewLM_31 AUGUSTUS mRNA 488499 491822 1 - . ID=LTnewLM_310019200.1;Parent=LTnewLM_310019200 LTnewLM_31 AUGUSTUS CDS 488499 491822 1 - 0 ID=LTnewLM_310019200.1:CDS:1;Parent=LTnewLM_310019200.1 ### LTnewLM_31 . polypeptide 488499 491822 . - . ID=LTnewLM_310019200.1:pep;Derives_from=LTnewLM_310019200.1;orthologous_to=LmjF.31.1150_mRNA;ortholog_cluster=OG0004475;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 494789 496678 1 - . ID=LTnewLM_310019300 LTnewLM_31 AUGUSTUS mRNA 494789 496678 1 - . ID=LTnewLM_310019300.1;Parent=LTnewLM_310019300 LTnewLM_31 AUGUSTUS CDS 494789 496678 1 - 0 ID=LTnewLM_310019300.1:CDS:1;Parent=LTnewLM_310019300.1 ### LTnewLM_31 . polypeptide 494789 496678 . - . ID=LTnewLM_310019300.1:pep;Derives_from=LTnewLM_310019300.1;orthologous_to=LTnewLM_310038100.1,LmjF.31.1160_mRNA;ortholog_cluster=OG0000438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 497808 498247 . - . ID=LTnewLM_310019400:pseudogene;coverage=0.993;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1165_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 497808 498247 . - . ID=LTnewLM_310019400.1;Parent=LTnewLM_310019400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 497808 498247 . - . ID=LTnewLM_310019400.1:pseudogenic_exon:1;Parent=LTnewLM_310019400.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 497808 498247 . - . ID=LTnewLM_310019400.1:pep;Derives_from=LTnewLM_310019400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 500743 501081 1 - . ID=LTnewLM_310019500 LTnewLM_31 AUGUSTUS mRNA 500743 501081 1 - . ID=LTnewLM_310019500.1;Parent=LTnewLM_310019500 LTnewLM_31 AUGUSTUS CDS 500743 501081 1 - 0 ID=LTnewLM_310019500.1:CDS:1;Parent=LTnewLM_310019500.1 ### LTnewLM_31 . polypeptide 500743 501081 . - . ID=LTnewLM_310019500.1:pep;Derives_from=LTnewLM_310019500.1;orthologous_to=LmjF.31.1170_mRNA;ortholog_cluster=OG0004476;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_31 Pfam protein_match 500902 501045 . - . Parent=LTnewLM_310019500.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_31 AUGUSTUS gene 501937 502425 1 - . ID=LTnewLM_310019600 LTnewLM_31 AUGUSTUS mRNA 501937 502425 1 - . ID=LTnewLM_310019600.1;Parent=LTnewLM_310019600 LTnewLM_31 AUGUSTUS CDS 501937 502425 1 - 0 ID=LTnewLM_310019600.1:CDS:1;Parent=LTnewLM_310019600.1 ### LTnewLM_31 . polypeptide 501937 502425 . - . ID=LTnewLM_310019600.1:pep;Derives_from=LTnewLM_310019600.1;orthologous_to=LmjF.31.1180_mRNA;ortholog_cluster=OG0004477;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 503579 503971 1 - . ID=LTnewLM_310019700 LTnewLM_31 AUGUSTUS mRNA 503579 503971 1 - . ID=LTnewLM_310019700.1;Parent=LTnewLM_310019700 LTnewLM_31 AUGUSTUS CDS 503579 503971 1 - 0 ID=LTnewLM_310019700.1:CDS:1;Parent=LTnewLM_310019700.1 ### LTnewLM_31 . polypeptide 503579 503971 . - . ID=LTnewLM_310019700.1:pep;Derives_from=LTnewLM_310019700.1;orthologous_to=LmjF.31.1190_mRNA;ortholog_cluster=OG0004478;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_31 Pfam protein_match 503753 503914 . - . Parent=LTnewLM_310019700.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_31 AUGUSTUS gene 506598 507002 1 - . ID=LTnewLM_310019800 LTnewLM_31 AUGUSTUS mRNA 506598 507002 1 - . ID=LTnewLM_310019800.1;Parent=LTnewLM_310019800 LTnewLM_31 AUGUSTUS CDS 506598 507002 1 - 0 ID=LTnewLM_310019800.1:CDS:1;Parent=LTnewLM_310019800.1 ### LTnewLM_31 . polypeptide 506598 507002 . - . ID=LTnewLM_310019800.1:pep;Derives_from=LTnewLM_310019800.1;orthologous_to=LmjF.31.1200_mRNA;ortholog_cluster=OG0004479;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_31 Pfam protein_match 506820 506936 . - . Parent=LTnewLM_310019800.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_31 AUGUSTUS gene 508325 523165 1 - . ID=LTnewLM_310019900 LTnewLM_31 AUGUSTUS mRNA 508325 523165 1 - . ID=LTnewLM_310019900.1;Parent=LTnewLM_310019900 LTnewLM_31 AUGUSTUS CDS 508325 523165 1 - 0 ID=LTnewLM_310019900.1:CDS:1;Parent=LTnewLM_310019900.1 ### LTnewLM_31 . polypeptide 508325 523165 . - . ID=LTnewLM_310019900.1:pep;Derives_from=LTnewLM_310019900.1;orthologous_to=LmjF.31.1210_mRNA;ortholog_cluster=OG0004480;product=term%3DThioredoxin-like/Protein of unknown function (DUF3638)/Protein of unknown function (DUF3645)/Zn-finger in Ran binding protein and others%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13905|Pfam:PF12340|Pfam:PF12359|Pfam:PF00641;Ontology_term=GO:0008270 LTnewLM_31 Pfam protein_match 508703 508774 . - . Parent=LTnewLM_310019900.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_31 Pfam protein_match 511799 511891 . - . Parent=LTnewLM_310019900.1:pep;Name=PF12359;signature_desc=Protein of unknown function (DUF3645) LTnewLM_31 Pfam protein_match 512495 513229 . - . Parent=LTnewLM_310019900.1:pep;Name=PF12340;signature_desc=Protein of unknown function (DUF3638) LTnewLM_31 Pfam protein_match 521222 521491 . - . Parent=LTnewLM_310019900.1:pep;Name=PF13905;signature_desc=Thioredoxin-like ### LTnewLM_31 AUGUSTUS gene 528027 530432 1 - . ID=LTnewLM_310020000 LTnewLM_31 AUGUSTUS mRNA 528027 530432 1 - . ID=LTnewLM_310020000.1;Parent=LTnewLM_310020000 LTnewLM_31 AUGUSTUS CDS 528027 530432 1 - 0 ID=LTnewLM_310020000.1:CDS:1;Parent=LTnewLM_310020000.1 ### LTnewLM_31 . polypeptide 528027 530432 . - . ID=LTnewLM_310020000.1:pep;Derives_from=LTnewLM_310020000.1;orthologous_to=LmjF.31.1220_mRNA;ortholog_cluster=OG0004481;product=term%3DInorganic H+ pyrophosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03030;Ontology_term=GO:0016020,GO:0004427,GO:0009678,GO:0015992 LTnewLM_31 Pfam protein_match 528084 530114 . - . Parent=LTnewLM_310020000.1:pep;Name=PF03030;signature_desc=Inorganic H+ pyrophosphatase;Ontology_term=GO:0004427,GO:0009678,GO:0015992,GO:0016020 ### LTnewLM_31 AUGUSTUS gene 531035 533731 1 - . ID=LTnewLM_310020100 LTnewLM_31 AUGUSTUS mRNA 531035 533731 1 - . ID=LTnewLM_310020100.1;Parent=LTnewLM_310020100 LTnewLM_31 AUGUSTUS CDS 531035 533731 1 - 0 ID=LTnewLM_310020100.1:CDS:1;Parent=LTnewLM_310020100.1 ### LTnewLM_31 . polypeptide 531035 533731 . - . ID=LTnewLM_310020100.1:pep;Derives_from=LTnewLM_310020100.1;orthologous_to=LmjF.31.1230_mRNA;ortholog_cluster=OG0004482;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Aragorn_1.2.36 gene 534747 534819 . + . ID=LTnewLM_310020200 LTnewLM_31 Aragorn_1.2.36 tRNA 534747 534819 . + . ID=LTnewLM_310020200:tRNA;Parent=LTnewLM_310020200;aa=Gly;anticodon=gcc;gc_content=65.8 ### LTnewLM_31 Aragorn_1.2.36 gene 534865 534938 . - . ID=LTnewLM_310020300 LTnewLM_31 Aragorn_1.2.36 tRNA 534865 534938 . - . ID=LTnewLM_310020300:tRNA;Parent=LTnewLM_310020300;aa=Glu;anticodon=ctc;gc_content=58.1 ### LTnewLM_31 AUGUSTUS gene 537011 540889 1 - . ID=LTnewLM_310020400 LTnewLM_31 AUGUSTUS mRNA 537011 540889 1 - . ID=LTnewLM_310020400.1;Parent=LTnewLM_310020400 LTnewLM_31 AUGUSTUS CDS 537011 540889 1 - 0 ID=LTnewLM_310020400.1:CDS:1;Parent=LTnewLM_310020400.1 ### LTnewLM_31 . polypeptide 537011 540889 . - . ID=LTnewLM_310020400.1:pep;Derives_from=LTnewLM_310020400.1;orthologous_to=LmjF.31.1240_mRNA;ortholog_cluster=OG0004483;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 542340 545612 1 - . ID=LTnewLM_310020500 LTnewLM_31 AUGUSTUS mRNA 542340 545612 1 - . ID=LTnewLM_310020500.1;Parent=LTnewLM_310020500 LTnewLM_31 AUGUSTUS CDS 542340 545612 1 - 0 ID=LTnewLM_310020500.1:CDS:1;Parent=LTnewLM_310020500.1 ### LTnewLM_31 . polypeptide 542340 545612 . - . ID=LTnewLM_310020500.1:pep;Derives_from=LTnewLM_310020500.1;orthologous_to=LmjF.31.1250_mRNA;ortholog_cluster=OG0004484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 547399 549283 0.61 - . ID=LTnewLM_310020600 LTnewLM_31 AUGUSTUS mRNA 547399 549283 0.61 - . ID=LTnewLM_310020600.1;Parent=LTnewLM_310020600 LTnewLM_31 AUGUSTUS CDS 547399 549068 0.86 - 2 ID=LTnewLM_310020600.1:CDS:1;Parent=LTnewLM_310020600.1 LTnewLM_31 AUGUSTUS CDS 549166 549283 0.61 - 0 ID=LTnewLM_310020600.1:CDS:2;Parent=LTnewLM_310020600.1 ### LTnewLM_31 . polypeptide 547399 549283 . - . ID=LTnewLM_310020600.1:pep;Derives_from=LTnewLM_310020600.1;orthologous_to=LmjF.31.1260_mRNA;ortholog_cluster=OG0004485;product=term%3DMicrotubule-binding stalk of dynein motor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12777 LTnewLM_31 Pfam protein_match 548531 548983 . - . Parent=LTnewLM_310020600.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor ### LTnewLM_31 AUGUSTUS gene 550998 556040 1 - . ID=LTnewLM_310020700 LTnewLM_31 AUGUSTUS mRNA 550998 556040 1 - . ID=LTnewLM_310020700.1;Parent=LTnewLM_310020700 LTnewLM_31 AUGUSTUS CDS 550998 556040 1 - 0 ID=LTnewLM_310020700.1:CDS:1;Parent=LTnewLM_310020700.1 ### LTnewLM_31 . polypeptide 550998 556040 . - . ID=LTnewLM_310020700.1:pep;Derives_from=LTnewLM_310020700.1;orthologous_to=LmjF.31.1270_mRNA;ortholog_cluster=OG0004486;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_31 Pfam protein_match 551271 551717 . - . Parent=LTnewLM_310020700.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 552117 552827 . - . Parent=LTnewLM_310020700.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_31 Pfam protein_match 553314 553715 . - . Parent=LTnewLM_310020700.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 554274 555077 . - . Parent=LTnewLM_310020700.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 557946 562559 1 - . ID=LTnewLM_310020800 LTnewLM_31 AUGUSTUS mRNA 557946 562559 1 - . ID=LTnewLM_310020800.1;Parent=LTnewLM_310020800 LTnewLM_31 AUGUSTUS CDS 557946 562559 1 - 0 ID=LTnewLM_310020800.1:CDS:1;Parent=LTnewLM_310020800.1 ### LTnewLM_31 . polypeptide 557946 562559 . - . ID=LTnewLM_310020800.1:pep;Derives_from=LTnewLM_310020800.1;orthologous_to=LTnewLM_310020900.1,LmjF.31.1280_mRNA,LmjF.31.1290_mRNA;ortholog_cluster=OG0000221;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_31 Pfam protein_match 558228 558674 . - . Parent=LTnewLM_310020800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 559005 559721 . - . Parent=LTnewLM_310020800.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_31 Pfam protein_match 560259 560660 . - . Parent=LTnewLM_310020800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 560937 561689 . - . Parent=LTnewLM_310020800.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 564379 569040 1 - . ID=LTnewLM_310020900 LTnewLM_31 AUGUSTUS mRNA 564379 569040 1 - . ID=LTnewLM_310020900.1;Parent=LTnewLM_310020900 LTnewLM_31 AUGUSTUS CDS 564379 569040 1 - 0 ID=LTnewLM_310020900.1:CDS:1;Parent=LTnewLM_310020900.1 ### LTnewLM_31 . polypeptide 564379 569040 . - . ID=LTnewLM_310020900.1:pep;Derives_from=LTnewLM_310020900.1;orthologous_to=LTnewLM_310020800.1,LmjF.31.1280_mRNA,LmjF.31.1290_mRNA;ortholog_cluster=OG0000221;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_31 Pfam protein_match 564652 565098 . - . Parent=LTnewLM_310020900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 565387 566160 . - . Parent=LTnewLM_310020900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_31 Pfam protein_match 566725 567126 . - . Parent=LTnewLM_310020900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 567403 567915 . - . Parent=LTnewLM_310020900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 571415 574405 1 - . ID=LTnewLM_310021000 LTnewLM_31 AUGUSTUS mRNA 571415 574405 1 - . ID=LTnewLM_310021000.1;Parent=LTnewLM_310021000 LTnewLM_31 AUGUSTUS CDS 571415 574405 1 - 0 ID=LTnewLM_310021000.1:CDS:1;Parent=LTnewLM_310021000.1 ### LTnewLM_31 . polypeptide 571415 574405 . - . ID=LTnewLM_310021000.1:pep;Derives_from=LTnewLM_310021000.1;orthologous_to=LmjF.31.1300_mRNA;ortholog_cluster=OG0004487;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 576607 581598 . - . ID=LTnewLM_310021100;coverage=1.0;sequence_ID=0.922;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.1310_0 LTnewLM_31 Liftoff mRNA 576607 581598 . - . ID=LTnewLM_310021100.1;Parent=LTnewLM_310021100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 576607 581598 . - 0 ID=LTnewLM_310021100.1:CDS:1;Parent=LTnewLM_310021100.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 576607 581598 . - . ID=LTnewLM_310021100.1:pep;Derives_from=LTnewLM_310021100.1;orthologous_to=LmjF.31.1310_mRNA;ortholog_cluster=OG0004488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 583503 591206 1 - . ID=LTnewLM_310021200 LTnewLM_31 AUGUSTUS mRNA 583503 591206 1 - . ID=LTnewLM_310021200.1;Parent=LTnewLM_310021200 LTnewLM_31 AUGUSTUS CDS 583503 591206 1 - 0 ID=LTnewLM_310021200.1:CDS:1;Parent=LTnewLM_310021200.1 ### LTnewLM_31 . polypeptide 583503 591206 . - . ID=LTnewLM_310021200.1:pep;Derives_from=LTnewLM_310021200.1;orthologous_to=LmjF.31.1320_mRNA;ortholog_cluster=OG0004489;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_31 Pfam protein_match 583959 584390 . - . Parent=LTnewLM_310021200.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_31 AUGUSTUS gene 600623 606328 1 - . ID=LTnewLM_310021300 LTnewLM_31 AUGUSTUS mRNA 600623 606328 1 - . ID=LTnewLM_310021300.1;Parent=LTnewLM_310021300 LTnewLM_31 AUGUSTUS CDS 600623 606328 1 - 0 ID=LTnewLM_310021300.1:CDS:1;Parent=LTnewLM_310021300.1 ### LTnewLM_31 . polypeptide 600623 606328 . - . ID=LTnewLM_310021300.1:pep;Derives_from=LTnewLM_310021300.1;orthologous_to=LmjF.31.1330_mRNA;ortholog_cluster=OG0004490;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 610548 611172 0.41 - . ID=LTnewLM_310021400 LTnewLM_31 AUGUSTUS mRNA 610548 611172 0.41 - . ID=LTnewLM_310021400.1;Parent=LTnewLM_310021400 LTnewLM_31 AUGUSTUS CDS 610548 610731 0.44 - 1 ID=LTnewLM_310021400.1:CDS:1;Parent=LTnewLM_310021400.1 LTnewLM_31 AUGUSTUS CDS 610946 611172 0.63 - 0 ID=LTnewLM_310021400.1:CDS:2;Parent=LTnewLM_310021400.1 ### LTnewLM_31 . polypeptide 610548 611172 . - . ID=LTnewLM_310021400.1:pep;Derives_from=LTnewLM_310021400.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_340037200.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 620101 621708 1 - . ID=LTnewLM_310021500 LTnewLM_31 AUGUSTUS mRNA 620101 621708 1 - . ID=LTnewLM_310021500.1;Parent=LTnewLM_310021500 LTnewLM_31 AUGUSTUS CDS 620101 621708 1 - 0 ID=LTnewLM_310021500.1:CDS:1;Parent=LTnewLM_310021500.1 ### LTnewLM_31 . polypeptide 620101 621708 . - . ID=LTnewLM_310021500.1:pep;Derives_from=LTnewLM_310021500.1;orthologous_to=LmjF.31.1340_mRNA;ortholog_cluster=OG0004491;product=term%3D'Cold-shock' DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00313;Ontology_term=GO:0006355,GO:0003677 LTnewLM_31 Pfam protein_match 620377 620499 . - . Parent=LTnewLM_310021500.1:pep;Name=PF00313;signature_desc='Cold-shock' DNA-binding domain;Ontology_term=GO:0003677,GO:0006355 ### LTnewLM_31 AUGUSTUS gene 633278 634846 1 - . ID=LTnewLM_310021600 LTnewLM_31 AUGUSTUS mRNA 633278 634846 1 - . ID=LTnewLM_310021600.1;Parent=LTnewLM_310021600 LTnewLM_31 AUGUSTUS CDS 633278 634846 1 - 0 ID=LTnewLM_310021600.1:CDS:1;Parent=LTnewLM_310021600.1 ### LTnewLM_31 . polypeptide 633278 634846 . - . ID=LTnewLM_310021600.1:pep;Derives_from=LTnewLM_310021600.1;orthologous_to=LmjF.31.1350_mRNA;ortholog_cluster=OG0004492;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 641574 642841 . - . ID=LTnewLM_310021700:pseudogene;coverage=0.998;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1360_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 641574 642841 . - . ID=LTnewLM_310021700.1;Parent=LTnewLM_310021700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 641574 642841 . - . ID=LTnewLM_310021700.1:pseudogenic_exon:1;Parent=LTnewLM_310021700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 641574 642841 . - . ID=LTnewLM_310021700.1:pep;Derives_from=LTnewLM_310021700.1;orthologous_to=LmjF.31.1360_mRNA;ortholog_cluster=OG0007601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 643601 648070 . - . ID=LTnewLM_310021800:pseudogene;coverage=0.997;sequence_ID=0.937;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1370_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 643601 648070 . - . ID=LTnewLM_310021800.1;Parent=LTnewLM_310021800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 643601 648070 . - . ID=LTnewLM_310021800.1:pseudogenic_exon:1;Parent=LTnewLM_310021800.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 643601 648070 . - . ID=LTnewLM_310021800.1:pep;Derives_from=LTnewLM_310021800.1;orthologous_to=LmjF.31.1370_mRNA;ortholog_cluster=OG0007602;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 649267 652776 1 - . ID=LTnewLM_310021900 LTnewLM_31 AUGUSTUS mRNA 649267 652776 1 - . ID=LTnewLM_310021900.1;Parent=LTnewLM_310021900 LTnewLM_31 AUGUSTUS CDS 649267 652776 1 - 0 ID=LTnewLM_310021900.1:CDS:1;Parent=LTnewLM_310021900.1 ### LTnewLM_31 . polypeptide 649267 652776 . - . ID=LTnewLM_310021900.1:pep;Derives_from=LTnewLM_310021900.1;orthologous_to=LmjF.31.1380_mRNA;ortholog_cluster=OG0004493;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 653660 655981 1 - . ID=LTnewLM_310022000 LTnewLM_31 AUGUSTUS mRNA 653660 655981 1 - . ID=LTnewLM_310022000.1;Parent=LTnewLM_310022000 LTnewLM_31 AUGUSTUS CDS 653660 655981 1 - 0 ID=LTnewLM_310022000.1:CDS:1;Parent=LTnewLM_310022000.1 ### LTnewLM_31 . polypeptide 653660 655981 . - . ID=LTnewLM_310022000.1:pep;Derives_from=LTnewLM_310022000.1;orthologous_to=LmjF.31.1390_mRNA;ortholog_cluster=OG0004494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 660553 661086 0.93 - . ID=LTnewLM_310022100 LTnewLM_31 AUGUSTUS mRNA 660553 661086 0.93 - . ID=LTnewLM_310022100.1;Parent=LTnewLM_310022100 LTnewLM_31 AUGUSTUS CDS 660553 661086 0.93 - 0 ID=LTnewLM_310022100.1:CDS:1;Parent=LTnewLM_310022100.1 ### LTnewLM_31 . polypeptide 660553 661086 . - . ID=LTnewLM_310022100.1:pep;Derives_from=LTnewLM_310022100.1;orthologous_to=LTnewLM_100019100.1,LTnewLM_310022300.1,LTnewLM_310022500.1,LTnewLM_310027800.1,LTnewLM_360061400.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 661836 662216 1 - . ID=LTnewLM_310022200 LTnewLM_31 AUGUSTUS mRNA 661836 662216 1 - . ID=LTnewLM_310022200.1;Parent=LTnewLM_310022200 LTnewLM_31 AUGUSTUS CDS 661836 662216 1 - 0 ID=LTnewLM_310022200.1:CDS:1;Parent=LTnewLM_310022200.1 ### LTnewLM_31 . polypeptide 661836 662216 . - . ID=LTnewLM_310022200.1:pep;Derives_from=LTnewLM_310022200.1;orthologous_to=LmjF.31.1395_mRNA;ortholog_cluster=OG0004495;product=term%3DLSD1 zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06943 LTnewLM_31 Pfam protein_match 662109 662180 . - . Parent=LTnewLM_310022200.1:pep;Name=PF06943;signature_desc=LSD1 zinc finger ### LTnewLM_31 AUGUSTUS gene 663210 663860 0.71 - . ID=LTnewLM_310022300 LTnewLM_31 AUGUSTUS mRNA 663210 663860 0.71 - . ID=LTnewLM_310022300.1;Parent=LTnewLM_310022300 LTnewLM_31 AUGUSTUS CDS 663210 663860 0.71 - 0 ID=LTnewLM_310022300.1:CDS:1;Parent=LTnewLM_310022300.1 ### LTnewLM_31 . polypeptide 663210 663860 . - . ID=LTnewLM_310022300.1:pep;Derives_from=LTnewLM_310022300.1;orthologous_to=LTnewLM_100019100.1,LTnewLM_310022100.1,LTnewLM_310022500.1,LTnewLM_310027800.1,LTnewLM_360061400.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 665342 669250 1 - . ID=LTnewLM_310022400 LTnewLM_31 AUGUSTUS mRNA 665342 669250 1 - . ID=LTnewLM_310022400.1;Parent=LTnewLM_310022400 LTnewLM_31 AUGUSTUS CDS 665342 669250 1 - 0 ID=LTnewLM_310022400.1:CDS:1;Parent=LTnewLM_310022400.1 ### LTnewLM_31 . polypeptide 665342 669250 . - . ID=LTnewLM_310022400.1:pep;Derives_from=LTnewLM_310022400.1;orthologous_to=LmjF.31.1400_mRNA;ortholog_cluster=OG0004496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 676978 677505 0.91 - . ID=LTnewLM_310022500 LTnewLM_31 AUGUSTUS mRNA 676978 677505 0.91 - . ID=LTnewLM_310022500.1;Parent=LTnewLM_310022500 LTnewLM_31 AUGUSTUS CDS 676978 677505 0.91 - 0 ID=LTnewLM_310022500.1:CDS:1;Parent=LTnewLM_310022500.1 ### LTnewLM_31 . polypeptide 676978 677505 . - . ID=LTnewLM_310022500.1:pep;Derives_from=LTnewLM_310022500.1;orthologous_to=LTnewLM_100019100.1,LTnewLM_310022100.1,LTnewLM_310022300.1,LTnewLM_310027800.1,LTnewLM_360061400.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 678424 685566 1 - . ID=LTnewLM_310022600 LTnewLM_31 AUGUSTUS mRNA 678424 685566 1 - . ID=LTnewLM_310022600.1;Parent=LTnewLM_310022600 LTnewLM_31 AUGUSTUS CDS 678424 685566 1 - 0 ID=LTnewLM_310022600.1:CDS:1;Parent=LTnewLM_310022600.1 ### LTnewLM_31 . polypeptide 678424 685566 . - . ID=LTnewLM_310022600.1:pep;Derives_from=LTnewLM_310022600.1;orthologous_to=LmjF.31.1410_mRNA;ortholog_cluster=OG0004497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 690952 694425 1 - . ID=LTnewLM_310022700 LTnewLM_31 AUGUSTUS mRNA 690952 694425 1 - . ID=LTnewLM_310022700.1;Parent=LTnewLM_310022700 LTnewLM_31 AUGUSTUS CDS 690952 694425 1 - 0 ID=LTnewLM_310022700.1:CDS:1;Parent=LTnewLM_310022700.1 ### LTnewLM_31 . polypeptide 690952 694425 . - . ID=LTnewLM_310022700.1:pep;Derives_from=LTnewLM_310022700.1;orthologous_to=LmjF.31.1420_mRNA;ortholog_cluster=OG0004498;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 695436 700841 1 - . ID=LTnewLM_310022800 LTnewLM_31 AUGUSTUS mRNA 695436 700841 1 - . ID=LTnewLM_310022800.1;Parent=LTnewLM_310022800 LTnewLM_31 AUGUSTUS CDS 695436 700841 1 - 0 ID=LTnewLM_310022800.1:CDS:1;Parent=LTnewLM_310022800.1 ### LTnewLM_31 . polypeptide 695436 700841 . - . ID=LTnewLM_310022800.1:pep;Derives_from=LTnewLM_310022800.1;orthologous_to=LmjF.31.1430_mRNA;ortholog_cluster=OG0004499;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_31 Pfam protein_match 695820 696314 . - . Parent=LTnewLM_310022800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 696741 697454 . - . Parent=LTnewLM_310022800.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_31 Pfam protein_match 698157 698678 . - . Parent=LTnewLM_310022800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_31 Pfam protein_match 699162 699959 . - . Parent=LTnewLM_310022800.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 702087 702464 0.88 - . ID=LTnewLM_310022900 LTnewLM_31 AUGUSTUS mRNA 702087 702464 0.88 - . ID=LTnewLM_310022900.1;Parent=LTnewLM_310022900 LTnewLM_31 AUGUSTUS CDS 702087 702464 0.88 - 0 ID=LTnewLM_310022900.1:CDS:1;Parent=LTnewLM_310022900.1 ### LTnewLM_31 . polypeptide 702087 702464 . - . ID=LTnewLM_310022900.1:pep;Derives_from=LTnewLM_310022900.1;orthologous_to=LTnewLM_310023100.1;ortholog_cluster=OG0004500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 707461 709071 1 - . ID=LTnewLM_310023000 LTnewLM_31 AUGUSTUS mRNA 707461 709071 1 - . ID=LTnewLM_310023000.1;Parent=LTnewLM_310023000 LTnewLM_31 AUGUSTUS CDS 707461 709071 1 - 0 ID=LTnewLM_310023000.1:CDS:1;Parent=LTnewLM_310023000.1 ### LTnewLM_31 . polypeptide 707461 709071 . - . ID=LTnewLM_310023000.1:pep;Derives_from=LTnewLM_310023000.1;orthologous_to=LTnewLM_300005000.1,LTnewLM_310023200.1;ortholog_cluster=OG0000429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 712842 713219 0.9 - . ID=LTnewLM_310023100 LTnewLM_31 AUGUSTUS mRNA 712842 713219 0.9 - . ID=LTnewLM_310023100.1;Parent=LTnewLM_310023100 LTnewLM_31 AUGUSTUS CDS 712842 713219 0.9 - 0 ID=LTnewLM_310023100.1:CDS:1;Parent=LTnewLM_310023100.1 ### LTnewLM_31 . polypeptide 712842 713219 . - . ID=LTnewLM_310023100.1:pep;Derives_from=LTnewLM_310023100.1;orthologous_to=LTnewLM_310022900.1;ortholog_cluster=OG0004500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 718251 719885 0.52 - . ID=LTnewLM_310023200 LTnewLM_31 AUGUSTUS mRNA 718251 719885 0.52 - . ID=LTnewLM_310023200.1;Parent=LTnewLM_310023200 LTnewLM_31 AUGUSTUS CDS 718251 718357 0.8 - 2 ID=LTnewLM_310023200.1:CDS:1;Parent=LTnewLM_310023200.1 LTnewLM_31 AUGUSTUS CDS 718448 719885 0.52 - 0 ID=LTnewLM_310023200.1:CDS:2;Parent=LTnewLM_310023200.1 ### LTnewLM_31 . polypeptide 718251 719885 . - . ID=LTnewLM_310023200.1:pep;Derives_from=LTnewLM_310023200.1;orthologous_to=LTnewLM_300005000.1,LTnewLM_310023000.1;ortholog_cluster=OG0000429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 725413 726827 0.91 - . ID=LTnewLM_310023300 LTnewLM_31 AUGUSTUS mRNA 725413 726827 0.91 - . ID=LTnewLM_310023300.1;Parent=LTnewLM_310023300 LTnewLM_31 AUGUSTUS CDS 725413 725945 0.91 - 2 ID=LTnewLM_310023300.1:CDS:1;Parent=LTnewLM_310023300.1 LTnewLM_31 AUGUSTUS CDS 726131 726827 0.91 - 0 ID=LTnewLM_310023300.1:CDS:2;Parent=LTnewLM_310023300.1 ### LTnewLM_31 . polypeptide 725413 726827 . - . ID=LTnewLM_310023300.1:pep;Derives_from=LTnewLM_310023300.1;orthologous_to=LmjF.31.1445_mRNA;ortholog_cluster=OG0004501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 729776 730114 1 - . ID=LTnewLM_310023400 LTnewLM_31 AUGUSTUS mRNA 729776 730114 1 - . ID=LTnewLM_310023400.1;Parent=LTnewLM_310023400 LTnewLM_31 AUGUSTUS CDS 729776 730114 1 - 0 ID=LTnewLM_310023400.1:CDS:1;Parent=LTnewLM_310023400.1 ### LTnewLM_31 . polypeptide 729776 730114 . - . ID=LTnewLM_310023400.1:pep;Derives_from=LTnewLM_310023400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 735420 736328 1 - . ID=LTnewLM_310023500 LTnewLM_31 AUGUSTUS mRNA 735420 736328 1 - . ID=LTnewLM_310023500.1;Parent=LTnewLM_310023500 LTnewLM_31 AUGUSTUS CDS 735420 736328 1 - 0 ID=LTnewLM_310023500.1:CDS:1;Parent=LTnewLM_310023500.1 ### LTnewLM_31 . polypeptide 735420 736328 . - . ID=LTnewLM_310023500.1:pep;Derives_from=LTnewLM_310023500.1;orthologous_to=LTnewLM_310023600.1,LmjF.31.1450_mRNA,LmjF.31.1460_mRNA;ortholog_cluster=OG0000222;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 740161 741072 1 - . ID=LTnewLM_310023600 LTnewLM_31 AUGUSTUS mRNA 740161 741072 1 - . ID=LTnewLM_310023600.1;Parent=LTnewLM_310023600 LTnewLM_31 AUGUSTUS CDS 740161 741072 1 - 0 ID=LTnewLM_310023600.1:CDS:1;Parent=LTnewLM_310023600.1 ### LTnewLM_31 . polypeptide 740161 741072 . - . ID=LTnewLM_310023600.1:pep;Derives_from=LTnewLM_310023600.1;orthologous_to=LTnewLM_310023500.1,LmjF.31.1450_mRNA,LmjF.31.1460_mRNA;ortholog_cluster=OG0000222;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 742188 745306 . - . ID=LTnewLM_310023700:pseudogene;coverage=0.997;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1470_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 742188 745306 . - . ID=LTnewLM_310023700.1;Parent=LTnewLM_310023700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 742188 745306 . - . ID=LTnewLM_310023700.1:pseudogenic_exon:1;Parent=LTnewLM_310023700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 742188 745306 . - . ID=LTnewLM_310023700.1:pep;Derives_from=LTnewLM_310023700.1;orthologous_to=LmjF.31.1470_mRNA;ortholog_cluster=OG0007603;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 747632 752521 1 - . ID=LTnewLM_310023800 LTnewLM_31 AUGUSTUS mRNA 747632 752521 1 - . ID=LTnewLM_310023800.1;Parent=LTnewLM_310023800 LTnewLM_31 AUGUSTUS CDS 747632 752521 1 - 0 ID=LTnewLM_310023800.1:CDS:1;Parent=LTnewLM_310023800.1 ### LTnewLM_31 . polypeptide 747632 752521 . - . ID=LTnewLM_310023800.1:pep;Derives_from=LTnewLM_310023800.1;orthologous_to=LmjF.31.1480_mRNA;ortholog_cluster=OG0004502;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_31 Pfam protein_match 748460 748522 . - . Parent=LTnewLM_310023800.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_31 . polypeptide 753545 757918 . - . ID=LTnewLM_310023900.1:pep;Derives_from=LTnewLM_310023900.1;orthologous_to=LTnewLM_310023900.2,LmjF.31.1490.1_mRNA,LmjF.31.1490.2_mRNA;ortholog_cluster=OG0000223;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 753545 758278 . - . ID=LTnewLM_310023900.2:pep;Derives_from=LTnewLM_310023900.2;orthologous_to=LTnewLM_310023900.1,LmjF.31.1490.1_mRNA,LmjF.31.1490.2_mRNA;ortholog_cluster=OG0000223;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 753545 761041 . - . ID=LTnewLM_310023900;coverage=0.938;sequence_ID=0.871;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.31.1490_0 LTnewLM_31 Liftoff mRNA 753545 758064 . - . ID=LTnewLM_310023900.1;Parent=LTnewLM_310023900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 753545 757918 . - 0 ID=LTnewLM_310023900.1:CDS:1;Parent=LTnewLM_310023900.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 757919 758064 . - . ID=LTnewLM_310023900:five_prime_UTR;Parent=LTnewLM_310023900.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 753545 761041 . - . ID=LTnewLM_310023900.2;Parent=LTnewLM_310023900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 753545 758278 . - 0 ID=LTnewLM_310023900.2:CDS:1;Parent=LTnewLM_310023900.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 758279 761041 . - . ID=LTnewLM_310023900:five_prime_UTR.1;Parent=LTnewLM_310023900.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 764124 767570 1 - . ID=LTnewLM_310024000 LTnewLM_31 AUGUSTUS mRNA 764124 767570 1 - . ID=LTnewLM_310024000.1;Parent=LTnewLM_310024000 LTnewLM_31 AUGUSTUS CDS 764124 767570 1 - 0 ID=LTnewLM_310024000.1:CDS:1;Parent=LTnewLM_310024000.1 ### LTnewLM_31 . polypeptide 764124 767570 . - . ID=LTnewLM_310024000.1:pep;Derives_from=LTnewLM_310024000.1;orthologous_to=LmjF.31.1500_mRNA;ortholog_cluster=OG0004503;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 770255 775333 1 - . ID=LTnewLM_310024100 LTnewLM_31 AUGUSTUS mRNA 770255 775333 1 - . ID=LTnewLM_310024100.1;Parent=LTnewLM_310024100 LTnewLM_31 AUGUSTUS CDS 770255 775333 1 - 0 ID=LTnewLM_310024100.1:CDS:1;Parent=LTnewLM_310024100.1 ### LTnewLM_31 . polypeptide 770255 775333 . - . ID=LTnewLM_310024100.1:pep;Derives_from=LTnewLM_310024100.1;orthologous_to=LmjF.31.1510_mRNA;ortholog_cluster=OG0004504;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 786198 789026 1 - . ID=LTnewLM_310024200 LTnewLM_31 AUGUSTUS mRNA 786198 789026 1 - . ID=LTnewLM_310024200.1;Parent=LTnewLM_310024200 LTnewLM_31 AUGUSTUS CDS 786198 789026 1 - 0 ID=LTnewLM_310024200.1:CDS:1;Parent=LTnewLM_310024200.1 ### LTnewLM_31 . polypeptide 786198 789026 . - . ID=LTnewLM_310024200.1:pep;Derives_from=LTnewLM_310024200.1;orthologous_to=LmjF.31.1520_mRNA;ortholog_cluster=OG0004505;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 795828 802670 1 - . ID=LTnewLM_310024300 LTnewLM_31 AUGUSTUS mRNA 795828 802670 1 - . ID=LTnewLM_310024300.1;Parent=LTnewLM_310024300 LTnewLM_31 AUGUSTUS CDS 795828 802670 1 - 0 ID=LTnewLM_310024300.1:CDS:1;Parent=LTnewLM_310024300.1 ### LTnewLM_31 . polypeptide 795828 802670 . - . ID=LTnewLM_310024300.1:pep;Derives_from=LTnewLM_310024300.1;orthologous_to=LmjF.31.1530_mRNA;ortholog_cluster=OG0004506;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_31 Pfam protein_match 797769 798263 . - . Parent=LTnewLM_310024300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 798039 798263 . - . Parent=LTnewLM_310024300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_31 Pfam protein_match 798750 799028 . - . Parent=LTnewLM_310024300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_31 Pfam protein_match 798756 799028 . - . Parent=LTnewLM_310024300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_31 AUGUSTUS gene 810125 811390 1 - . ID=LTnewLM_310024400 LTnewLM_31 AUGUSTUS mRNA 810125 811390 1 - . ID=LTnewLM_310024400.1;Parent=LTnewLM_310024400 LTnewLM_31 AUGUSTUS CDS 810125 811390 1 - 0 ID=LTnewLM_310024400.1:CDS:1;Parent=LTnewLM_310024400.1 ### LTnewLM_31 . polypeptide 810125 811390 . - . ID=LTnewLM_310024400.1:pep;Derives_from=LTnewLM_310024400.1;orthologous_to=LmjF.31.1540_mRNA;ortholog_cluster=OG0004507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 813562 814350 1 - . ID=LTnewLM_310024500 LTnewLM_31 AUGUSTUS mRNA 813562 814350 1 - . ID=LTnewLM_310024500.1;Parent=LTnewLM_310024500 LTnewLM_31 AUGUSTUS CDS 813562 814350 1 - 0 ID=LTnewLM_310024500.1:CDS:1;Parent=LTnewLM_310024500.1 ### LTnewLM_31 . polypeptide 813562 814350 . - . ID=LTnewLM_310024500.1:pep;Derives_from=LTnewLM_310024500.1;orthologous_to=LmjF.31.1550_mRNA;ortholog_cluster=OG0004508;product=term%3DMitochondrial ribosomal protein L51 / S25 / CI-B8 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05047 LTnewLM_31 Pfam protein_match 814126 814278 . - . Parent=LTnewLM_310024500.1:pep;Name=PF05047;signature_desc=Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain ### LTnewLM_31 AUGUSTUS gene 814874 815842 1 - . ID=LTnewLM_310024600 LTnewLM_31 AUGUSTUS mRNA 814874 815842 1 - . ID=LTnewLM_310024600.1;Parent=LTnewLM_310024600 LTnewLM_31 AUGUSTUS CDS 814874 815842 1 - 0 ID=LTnewLM_310024600.1:CDS:1;Parent=LTnewLM_310024600.1 ### LTnewLM_31 . polypeptide 814874 815842 . - . ID=LTnewLM_310024600.1:pep;Derives_from=LTnewLM_310024600.1;orthologous_to=LmjF.31.1560_mRNA;ortholog_cluster=OG0004509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 817775 818248 1 - . ID=LTnewLM_310024700 LTnewLM_31 AUGUSTUS mRNA 817775 818248 1 - . ID=LTnewLM_310024700.1;Parent=LTnewLM_310024700 LTnewLM_31 AUGUSTUS CDS 817775 818248 1 - 0 ID=LTnewLM_310024700.1:CDS:1;Parent=LTnewLM_310024700.1 ### LTnewLM_31 . polypeptide 817775 818248 . - . ID=LTnewLM_310024700.1:pep;Derives_from=LTnewLM_310024700.1;orthologous_to=LmjF.31.1570_mRNA;ortholog_cluster=OG0004510;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 818822 819193 1 - . ID=LTnewLM_310024800 LTnewLM_31 AUGUSTUS mRNA 818822 819193 1 - . ID=LTnewLM_310024800.1;Parent=LTnewLM_310024800 LTnewLM_31 AUGUSTUS CDS 818822 819193 1 - 0 ID=LTnewLM_310024800.1:CDS:1;Parent=LTnewLM_310024800.1 ### LTnewLM_31 . polypeptide 818822 819193 . - . ID=LTnewLM_310024800.1:pep;Derives_from=LTnewLM_310024800.1;orthologous_to=LmjF.31.1580_mRNA;ortholog_cluster=OG0004511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 819698 820258 1 - . ID=LTnewLM_310024900 LTnewLM_31 AUGUSTUS mRNA 819698 820258 1 - . ID=LTnewLM_310024900.1;Parent=LTnewLM_310024900 LTnewLM_31 AUGUSTUS CDS 819698 820258 1 - 0 ID=LTnewLM_310024900.1:CDS:1;Parent=LTnewLM_310024900.1 ### LTnewLM_31 . polypeptide 819698 820258 . - . ID=LTnewLM_310024900.1:pep;Derives_from=LTnewLM_310024900.1;orthologous_to=LmjF.31.1590_mRNA;ortholog_cluster=OG0004512;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 821867 824302 1 - . ID=LTnewLM_310025000 LTnewLM_31 AUGUSTUS mRNA 821867 824302 1 - . ID=LTnewLM_310025000.1;Parent=LTnewLM_310025000 LTnewLM_31 AUGUSTUS CDS 821867 824302 1 - 0 ID=LTnewLM_310025000.1:CDS:1;Parent=LTnewLM_310025000.1 ### LTnewLM_31 . polypeptide 821867 824302 . - . ID=LTnewLM_310025000.1:pep;Derives_from=LTnewLM_310025000.1;orthologous_to=LmjF.31.1600_mRNA;ortholog_cluster=OG0004513;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_31 Pfam protein_match 822239 822289 . - . Parent=LTnewLM_310025000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_31 Pfam protein_match 823337 823390 . - . Parent=LTnewLM_310025000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_31 AUGUSTUS gene 824573 825388 1 - . ID=LTnewLM_310025100 LTnewLM_31 AUGUSTUS mRNA 824573 825388 1 - . ID=LTnewLM_310025100.1;Parent=LTnewLM_310025100 LTnewLM_31 AUGUSTUS CDS 824573 825388 1 - 0 ID=LTnewLM_310025100.1:CDS:1;Parent=LTnewLM_310025100.1 ### LTnewLM_31 . polypeptide 824573 825388 . - . ID=LTnewLM_310025100.1:pep;Derives_from=LTnewLM_310025100.1;orthologous_to=LmjF.31.1610_mRNA;ortholog_cluster=OG0004514;product=term%3DTetrapyrrole (Corrin/Porphyrin) Methylases%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00590;Ontology_term=GO:0008152,GO:0008168 LTnewLM_31 Pfam protein_match 824681 825388 . - . Parent=LTnewLM_310025100.1:pep;Name=PF00590;signature_desc=Tetrapyrrole (Corrin/Porphyrin) Methylases;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_31 AUGUSTUS gene 825657 826196 1 - . ID=LTnewLM_310025200 LTnewLM_31 AUGUSTUS mRNA 825657 826196 1 - . ID=LTnewLM_310025200.1;Parent=LTnewLM_310025200 LTnewLM_31 AUGUSTUS CDS 825657 826196 1 - 0 ID=LTnewLM_310025200.1:CDS:1;Parent=LTnewLM_310025200.1 ### LTnewLM_31 . polypeptide 825657 826196 . - . ID=LTnewLM_310025200.1:pep;Derives_from=LTnewLM_310025200.1;orthologous_to=LmjF.31.1620_mRNA;ortholog_cluster=OG0004515;product=term%3DProtein of unknown function DUF84%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01931 LTnewLM_31 Pfam protein_match 825681 826178 . - . Parent=LTnewLM_310025200.1:pep;Name=PF01931;signature_desc=Protein of unknown function DUF84 ### LTnewLM_31 AUGUSTUS gene 826548 827624 1 - . ID=LTnewLM_310025300 LTnewLM_31 AUGUSTUS mRNA 826548 827624 1 - . ID=LTnewLM_310025300.1;Parent=LTnewLM_310025300 LTnewLM_31 AUGUSTUS CDS 826548 827624 1 - 0 ID=LTnewLM_310025300.1:CDS:1;Parent=LTnewLM_310025300.1 ### LTnewLM_31 . polypeptide 826548 827624 . - . ID=LTnewLM_310025300.1:pep;Derives_from=LTnewLM_310025300.1;orthologous_to=LTnewLM_310025400.1,LmjF.31.1630_mRNA,LmjF.31.1640_mRNA;ortholog_cluster=OG0000224;product=term%3DThiolase%2C N-terminal domain/Beta-ketoacyl synthase%2C N-terminal domain/Thiolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00108|Pfam:PF00109|Pfam:PF02803;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 826569 826973 . - . Parent=LTnewLM_310025300.1:pep;Name=PF02803;signature_desc=Thiolase%2C C-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 827013 827621 . - . Parent=LTnewLM_310025300.1:pep;Name=PF00108;signature_desc=Thiolase%2C N-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 827490 827588 . - . Parent=LTnewLM_310025300.1:pep;Name=PF00109;signature_desc=Beta-ketoacyl synthase%2C N-terminal domain ### LTnewLM_31 AUGUSTUS gene 828190 829512 1 - . ID=LTnewLM_310025400 LTnewLM_31 AUGUSTUS mRNA 828190 829512 1 - . ID=LTnewLM_310025400.1;Parent=LTnewLM_310025400 LTnewLM_31 AUGUSTUS CDS 828190 829512 1 - 0 ID=LTnewLM_310025400.1:CDS:1;Parent=LTnewLM_310025400.1 ### LTnewLM_31 . polypeptide 828190 829512 . - . ID=LTnewLM_310025400.1:pep;Derives_from=LTnewLM_310025400.1;orthologous_to=LTnewLM_310025300.1,LmjF.31.1630_mRNA,LmjF.31.1640_mRNA;ortholog_cluster=OG0000224;product=term%3DThiolase%2C N-terminal domain/Beta-ketoacyl synthase%2C N-terminal domain/Thiolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00108|Pfam:PF00109|Pfam:PF02803;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 828211 828618 . - . Parent=LTnewLM_310025400.1:pep;Name=PF02803;signature_desc=Thiolase%2C C-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 828655 829476 . - . Parent=LTnewLM_310025400.1:pep;Name=PF00108;signature_desc=Thiolase%2C N-terminal domain;Ontology_term=GO:0016747,GO:0008152 LTnewLM_31 Pfam protein_match 829132 829230 . - . Parent=LTnewLM_310025400.1:pep;Name=PF00109;signature_desc=Beta-ketoacyl synthase%2C N-terminal domain ### LTnewLM_31 AUGUSTUS gene 834422 835858 1 - . ID=LTnewLM_310025500 LTnewLM_31 AUGUSTUS mRNA 834422 835858 1 - . ID=LTnewLM_310025500.1;Parent=LTnewLM_310025500 LTnewLM_31 AUGUSTUS CDS 834422 835858 1 - 0 ID=LTnewLM_310025500.1:CDS:1;Parent=LTnewLM_310025500.1 ### LTnewLM_31 . polypeptide 834422 835858 . - . ID=LTnewLM_310025500.1:pep;Derives_from=LTnewLM_310025500.1;orthologous_to=LmjF.31.1650_mRNA;ortholog_cluster=OG0004516;product=term%3DMYND finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753 LTnewLM_31 Pfam protein_match 834521 834628 . - . Parent=LTnewLM_310025500.1:pep;Name=PF01753;signature_desc=MYND finger ### LTnewLM_31 AUGUSTUS gene 836325 836885 1 - . ID=LTnewLM_310025600 LTnewLM_31 AUGUSTUS mRNA 836325 836885 1 - . ID=LTnewLM_310025600.1;Parent=LTnewLM_310025600 LTnewLM_31 AUGUSTUS CDS 836325 836885 1 - 0 ID=LTnewLM_310025600.1:CDS:1;Parent=LTnewLM_310025600.1 ### LTnewLM_31 . polypeptide 836325 836885 . - . ID=LTnewLM_310025600.1:pep;Derives_from=LTnewLM_310025600.1;orthologous_to=LmjF.31.1660_mRNA;ortholog_cluster=OG0004517;product=term%3DGINS complex protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05916 LTnewLM_31 Pfam protein_match 836451 836729 . - . Parent=LTnewLM_310025600.1:pep;Name=PF05916;signature_desc=GINS complex protein ### LTnewLM_31 AUGUSTUS gene 838029 838877 1 - . ID=LTnewLM_310025700 LTnewLM_31 AUGUSTUS mRNA 838029 838877 1 - . ID=LTnewLM_310025700.1;Parent=LTnewLM_310025700 LTnewLM_31 AUGUSTUS CDS 838029 838877 1 - 0 ID=LTnewLM_310025700.1:CDS:1;Parent=LTnewLM_310025700.1 ### LTnewLM_31 . polypeptide 838029 838877 . - . ID=LTnewLM_310025700.1:pep;Derives_from=LTnewLM_310025700.1;orthologous_to=LmjF.31.1670_mRNA;ortholog_cluster=OG0004518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 839934 840761 1 - . ID=LTnewLM_310025800 LTnewLM_31 AUGUSTUS mRNA 839934 840761 1 - . ID=LTnewLM_310025800.1;Parent=LTnewLM_310025800 LTnewLM_31 AUGUSTUS CDS 839934 840761 1 - 0 ID=LTnewLM_310025800.1:CDS:1;Parent=LTnewLM_310025800.1 ### LTnewLM_31 . polypeptide 839934 840761 . - . ID=LTnewLM_310025800.1:pep;Derives_from=LTnewLM_310025800.1;orthologous_to=LmjF.31.1680_mRNA;ortholog_cluster=OG0004519;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 841364 845680 1 - . ID=LTnewLM_310025900 LTnewLM_31 AUGUSTUS mRNA 841364 845680 1 - . ID=LTnewLM_310025900.1;Parent=LTnewLM_310025900 LTnewLM_31 AUGUSTUS CDS 841364 845680 1 - 0 ID=LTnewLM_310025900.1:CDS:1;Parent=LTnewLM_310025900.1 ### LTnewLM_31 . polypeptide 841364 845680 . - . ID=LTnewLM_310025900.1:pep;Derives_from=LTnewLM_310025900.1;orthologous_to=LmjF.31.1690_mRNA;ortholog_cluster=OG0004520;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 846140 848173 1 - . ID=LTnewLM_310026000 LTnewLM_31 AUGUSTUS mRNA 846140 848173 1 - . ID=LTnewLM_310026000.1;Parent=LTnewLM_310026000 LTnewLM_31 AUGUSTUS CDS 846140 848173 1 - 0 ID=LTnewLM_310026000.1:CDS:1;Parent=LTnewLM_310026000.1 ### LTnewLM_31 . polypeptide 846140 848173 . - . ID=LTnewLM_310026000.1:pep;Derives_from=LTnewLM_310026000.1;orthologous_to=LmjF.31.1700_mRNA;ortholog_cluster=OG0004521;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 849091 851220 1 - . ID=LTnewLM_310026100 LTnewLM_31 AUGUSTUS mRNA 849091 851220 1 - . ID=LTnewLM_310026100.1;Parent=LTnewLM_310026100 LTnewLM_31 AUGUSTUS CDS 849091 851220 1 - 0 ID=LTnewLM_310026100.1:CDS:1;Parent=LTnewLM_310026100.1 ### LTnewLM_31 . polypeptide 849091 851220 . - . ID=LTnewLM_310026100.1:pep;Derives_from=LTnewLM_310026100.1;orthologous_to=LmjF.31.1710_mRNA;ortholog_cluster=OG0004522;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 852455 856051 1 - . ID=LTnewLM_310026200 LTnewLM_31 AUGUSTUS mRNA 852455 856051 1 - . ID=LTnewLM_310026200.1;Parent=LTnewLM_310026200 LTnewLM_31 AUGUSTUS CDS 852455 856051 1 - 0 ID=LTnewLM_310026200.1:CDS:1;Parent=LTnewLM_310026200.1 ### LTnewLM_31 . polypeptide 852455 856051 . - . ID=LTnewLM_310026200.1:pep;Derives_from=LTnewLM_310026200.1;orthologous_to=LmjF.31.1720_mRNA;ortholog_cluster=OG0004523;product=term%3DCullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_31 Pfam protein_match 852488 852667 . - . Parent=LTnewLM_310026200.1:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_31 AUGUSTUS gene 859769 860917 1 - . ID=LTnewLM_310026300 LTnewLM_31 AUGUSTUS mRNA 859769 860917 1 - . ID=LTnewLM_310026300.1;Parent=LTnewLM_310026300 LTnewLM_31 AUGUSTUS CDS 859769 860917 1 - 0 ID=LTnewLM_310026300.1:CDS:1;Parent=LTnewLM_310026300.1 ### LTnewLM_31 . polypeptide 859769 860917 . - . ID=LTnewLM_310026300.1:pep;Derives_from=LTnewLM_310026300.1;orthologous_to=LmjF.31.1730_mRNA;ortholog_cluster=OG0004524;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 863265 864823 . - . ID=LTnewLM_310026400:pseudogene;coverage=0.991;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1740_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 863265 864823 . - . ID=LTnewLM_310026400.1;Parent=LTnewLM_310026400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 863265 864823 . - . ID=LTnewLM_310026400.1:pseudogenic_exon:1;Parent=LTnewLM_310026400.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 863265 864823 . - . ID=LTnewLM_310026400.1:pep;Derives_from=LTnewLM_310026400.1;orthologous_to=LmjF.31.1740_mRNA;ortholog_cluster=OG0007604;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 867291 867518 1 - . ID=LTnewLM_310026500 LTnewLM_31 AUGUSTUS mRNA 867291 867518 1 - . ID=LTnewLM_310026500.1;Parent=LTnewLM_310026500 LTnewLM_31 AUGUSTUS CDS 867291 867518 1 - 0 ID=LTnewLM_310026500.1:CDS:1;Parent=LTnewLM_310026500.1 ### LTnewLM_31 . polypeptide 867291 867518 . - . ID=LTnewLM_310026500.1:pep;Derives_from=LTnewLM_310026500.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 868714 869925 1 - . ID=LTnewLM_310026600 LTnewLM_31 AUGUSTUS mRNA 868714 869925 1 - . ID=LTnewLM_310026600.1;Parent=LTnewLM_310026600 LTnewLM_31 AUGUSTUS CDS 868714 869925 1 - 0 ID=LTnewLM_310026600.1:CDS:1;Parent=LTnewLM_310026600.1 ### LTnewLM_31 . polypeptide 868714 869925 . - . ID=LTnewLM_310026600.1:pep;Derives_from=LTnewLM_310026600.1;orthologous_to=LmjF.31.1750_mRNA;ortholog_cluster=OG0004525;product=term%3DNucleosome assembly protein (NAP)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00956;Ontology_term=GO:0005634,GO:0006334 LTnewLM_31 Pfam protein_match 868960 869808 . - . Parent=LTnewLM_310026600.1:pep;Name=PF00956;signature_desc=Nucleosome assembly protein (NAP);Ontology_term=GO:0006334,GO:0005634 ### LTnewLM_31 AUGUSTUS gene 875522 876649 1 - . ID=LTnewLM_310026700 LTnewLM_31 AUGUSTUS mRNA 875522 876649 1 - . ID=LTnewLM_310026700.1;Parent=LTnewLM_310026700 LTnewLM_31 AUGUSTUS CDS 875522 876649 1 - 0 ID=LTnewLM_310026700.1:CDS:1;Parent=LTnewLM_310026700.1 ### LTnewLM_31 . polypeptide 875522 876649 . - . ID=LTnewLM_310026700.1:pep;Derives_from=LTnewLM_310026700.1;orthologous_to=LmjF.31.1760_mRNA;ortholog_cluster=OG0004526;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 879004 882054 . - . ID=LTnewLM_310026800.1:pep;Derives_from=LTnewLM_310026800.1;orthologous_to=LTnewLM_310026800.2,LmjF.31.1770.1_mRNA,LmjF.31.1770.2_mRNA;ortholog_cluster=OG0000225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 879004 882375 . - . ID=LTnewLM_310026800.2:pep;Derives_from=LTnewLM_310026800.2;orthologous_to=LTnewLM_310026800.1,LmjF.31.1770.1_mRNA,LmjF.31.1770.2_mRNA;ortholog_cluster=OG0000225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 879004 883056 . - . ID=LTnewLM_310026800;coverage=0.995;sequence_ID=0.939;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.31.1770_0 LTnewLM_31 Liftoff mRNA 879004 882301 . - . ID=LTnewLM_310026800.1;Parent=LTnewLM_310026800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 879004 882054 . - 0 ID=LTnewLM_310026800.1:CDS:1;Parent=LTnewLM_310026800.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 882055 882301 . - . ID=LTnewLM_310026800:five_prime_UTR;Parent=LTnewLM_310026800.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 879004 883056 . - . ID=LTnewLM_310026800.2;Parent=LTnewLM_310026800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 879004 882375 . - 0 ID=LTnewLM_310026800.2:CDS:1;Parent=LTnewLM_310026800.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 882376 883056 . - . ID=LTnewLM_310026800:five_prime_UTR.1;Parent=LTnewLM_310026800.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 885416 886801 1 - . ID=LTnewLM_310026900 LTnewLM_31 AUGUSTUS mRNA 885416 886801 1 - . ID=LTnewLM_310026900.1;Parent=LTnewLM_310026900 LTnewLM_31 AUGUSTUS CDS 885416 886801 1 - 0 ID=LTnewLM_310026900.1:CDS:1;Parent=LTnewLM_310026900.1 ### LTnewLM_31 . polypeptide 885416 886801 . - . ID=LTnewLM_310026900.1:pep;Derives_from=LTnewLM_310026900.1;orthologous_to=LmjF.31.1780_mRNA;ortholog_cluster=OG0004527;product=term%3DTLC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03798;Ontology_term=GO:0016021 LTnewLM_31 Pfam protein_match 885677 886375 . - . Parent=LTnewLM_310026900.1:pep;Name=PF03798;signature_desc=TLC domain;Ontology_term=GO:0016021 ### LTnewLM_31 AUGUSTUS gene 892470 894287 1 - . ID=LTnewLM_310027000 LTnewLM_31 AUGUSTUS mRNA 892470 894287 1 - . ID=LTnewLM_310027000.1;Parent=LTnewLM_310027000 LTnewLM_31 AUGUSTUS CDS 892470 894287 1 - 0 ID=LTnewLM_310027000.1:CDS:1;Parent=LTnewLM_310027000.1 ### LTnewLM_31 . polypeptide 892470 894287 . - . ID=LTnewLM_310027000.1:pep;Derives_from=LTnewLM_310027000.1;orthologous_to=LTnewLM_000006000.1,LTnewLM_310027200.1,LTnewLM_310027600.1,LmjF.31.1790_mRNA,LmjF.31.1800_mRNA,LmjF.31.1820_mRNA;ortholog_cluster=OG0000043;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_31 Pfam protein_match 892488 894032 . - . Parent=LTnewLM_310027000.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 893505 894026 . - . Parent=LTnewLM_310027000.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 AUGUSTUS gene 895764 896036 0.84 - . ID=LTnewLM_310027100 LTnewLM_31 AUGUSTUS mRNA 895764 896036 0.84 - . ID=LTnewLM_310027100.1;Parent=LTnewLM_310027100 LTnewLM_31 AUGUSTUS CDS 895764 896036 0.84 - 0 ID=LTnewLM_310027100.1:CDS:1;Parent=LTnewLM_310027100.1 ### LTnewLM_31 . polypeptide 895764 896036 . - . ID=LTnewLM_310027100.1:pep;Derives_from=LTnewLM_310027100.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 899298 901061 1 - . ID=LTnewLM_310027200 LTnewLM_31 AUGUSTUS mRNA 899298 901061 1 - . ID=LTnewLM_310027200.1;Parent=LTnewLM_310027200 LTnewLM_31 AUGUSTUS CDS 899298 901061 1 - 0 ID=LTnewLM_310027200.1:CDS:1;Parent=LTnewLM_310027200.1 ### LTnewLM_31 . polypeptide 899298 901061 . - . ID=LTnewLM_310027200.1:pep;Derives_from=LTnewLM_310027200.1;orthologous_to=LTnewLM_000006000.1,LTnewLM_310027000.1,LTnewLM_310027600.1,LmjF.31.1790_mRNA,LmjF.31.1800_mRNA,LmjF.31.1820_mRNA;ortholog_cluster=OG0000043;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_31 Pfam protein_match 899316 900860 . - . Parent=LTnewLM_310027200.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 900333 900854 . - . Parent=LTnewLM_310027200.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 Liftoff gene 903929 904309 . - . ID=LTnewLM_310027300;coverage=1.0;sequence_ID=0.913;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1810_0 LTnewLM_31 Liftoff mRNA 903929 904309 . - . ID=LTnewLM_310027300.1;Parent=LTnewLM_310027300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 903929 904309 . - 0 ID=LTnewLM_310027300.1:CDS:1;Parent=LTnewLM_310027300.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 903929 904309 . - . ID=LTnewLM_310027300.1:pep;Derives_from=LTnewLM_310027300.1;orthologous_to=LmjF.31.1810_mRNA;ortholog_cluster=OG0004528;product=term%3DPeptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07687 LTnewLM_31 Pfam protein_match 903944 904216 . - . Parent=LTnewLM_310027300.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_31 AUGUSTUS gene 906794 907153 1 - . ID=LTnewLM_310027400 LTnewLM_31 AUGUSTUS mRNA 906794 907153 1 - . ID=LTnewLM_310027400.1;Parent=LTnewLM_310027400 LTnewLM_31 AUGUSTUS CDS 906794 907153 1 - 0 ID=LTnewLM_310027400.1:CDS:1;Parent=LTnewLM_310027400.1 ### LTnewLM_31 . polypeptide 906794 907153 . - . ID=LTnewLM_310027400.1:pep;Derives_from=LTnewLM_310027400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 908064 908411 1 - . ID=LTnewLM_310027500 LTnewLM_31 AUGUSTUS mRNA 908064 908411 1 - . ID=LTnewLM_310027500.1;Parent=LTnewLM_310027500 LTnewLM_31 AUGUSTUS CDS 908064 908411 1 - 0 ID=LTnewLM_310027500.1:CDS:1;Parent=LTnewLM_310027500.1 ### LTnewLM_31 . polypeptide 908064 908411 . - . ID=LTnewLM_310027500.1:pep;Derives_from=LTnewLM_310027500.1;orthologous_to=LTnewLM_230026500.1,LTnewLM_330022200.1,LTnewLM_330022200.2;ortholog_cluster=OG0000172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 909517 911334 1 - . ID=LTnewLM_310027600 LTnewLM_31 AUGUSTUS mRNA 909517 911334 1 - . ID=LTnewLM_310027600.1;Parent=LTnewLM_310027600 LTnewLM_31 AUGUSTUS CDS 909517 911334 1 - 0 ID=LTnewLM_310027600.1:CDS:1;Parent=LTnewLM_310027600.1 ### LTnewLM_31 . polypeptide 909517 911334 . - . ID=LTnewLM_310027600.1:pep;Derives_from=LTnewLM_310027600.1;orthologous_to=LTnewLM_000006000.1,LTnewLM_310027000.1,LTnewLM_310027200.1,LmjF.31.1790_mRNA,LmjF.31.1800_mRNA,LmjF.31.1820_mRNA;ortholog_cluster=OG0000043;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family/Amino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222|Pfam:PF13520;Ontology_term=GO:0016020,GO:0015171,GO:0003333 LTnewLM_31 Pfam protein_match 909535 911079 . - . Parent=LTnewLM_310027600.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_31 Pfam protein_match 910117 911067 . - . Parent=LTnewLM_310027600.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 LTnewLM_31 Pfam protein_match 910552 911073 . - . Parent=LTnewLM_310027600.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_31 AUGUSTUS gene 915878 919999 1 - . ID=LTnewLM_310027700 LTnewLM_31 AUGUSTUS mRNA 915878 919999 1 - . ID=LTnewLM_310027700.1;Parent=LTnewLM_310027700 LTnewLM_31 AUGUSTUS CDS 915878 919999 1 - 0 ID=LTnewLM_310027700.1:CDS:1;Parent=LTnewLM_310027700.1 ### LTnewLM_31 . polypeptide 915878 919999 . - . ID=LTnewLM_310027700.1:pep;Derives_from=LTnewLM_310027700.1;orthologous_to=LmjF.31.1830_mRNA;ortholog_cluster=OG0004529;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_31 Pfam protein_match 915971 916666 . - . Parent=LTnewLM_310027700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 916370 916663 . - . Parent=LTnewLM_310027700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_31 AUGUSTUS gene 921609 921929 0.64 - . ID=LTnewLM_310027800 LTnewLM_31 AUGUSTUS mRNA 921609 921929 0.64 - . ID=LTnewLM_310027800.1;Parent=LTnewLM_310027800 LTnewLM_31 AUGUSTUS CDS 921609 921929 0.64 - 0 ID=LTnewLM_310027800.1:CDS:1;Parent=LTnewLM_310027800.1 ### LTnewLM_31 . polypeptide 921609 921929 . - . ID=LTnewLM_310027800.1:pep;Derives_from=LTnewLM_310027800.1;orthologous_to=LTnewLM_100019100.1,LTnewLM_310022100.1,LTnewLM_310022300.1,LTnewLM_310022500.1,LTnewLM_360061400.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 925070 929149 1 - . ID=LTnewLM_310027900 LTnewLM_31 AUGUSTUS mRNA 925070 929149 1 - . ID=LTnewLM_310027900.1;Parent=LTnewLM_310027900 LTnewLM_31 AUGUSTUS CDS 925070 929149 1 - 0 ID=LTnewLM_310027900.1:CDS:1;Parent=LTnewLM_310027900.1 ### LTnewLM_31 . polypeptide 925070 929149 . - . ID=LTnewLM_310027900.1:pep;Derives_from=LTnewLM_310027900.1;orthologous_to=LmjF.31.1840_mRNA;ortholog_cluster=OG0004530;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 925136 925789 . - . Parent=LTnewLM_310027900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 925526 925825 . - . Parent=LTnewLM_310027900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_31 AUGUSTUS gene 932936 933241 1 - . ID=LTnewLM_310028000 LTnewLM_31 AUGUSTUS mRNA 932936 933241 1 - . ID=LTnewLM_310028000.1;Parent=LTnewLM_310028000 LTnewLM_31 AUGUSTUS CDS 932936 933241 1 - 0 ID=LTnewLM_310028000.1:CDS:1;Parent=LTnewLM_310028000.1 ### LTnewLM_31 . polypeptide 932936 933241 . - . ID=LTnewLM_310028000.1:pep;Derives_from=LTnewLM_310028000.1;orthologous_to=LmjF.31.1850_mRNA;ortholog_cluster=OG0004531;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 934466 934924 . - . ID=LTnewLM_310028100.1:pep;Derives_from=LTnewLM_310028100.1;orthologous_to=LmjF.31.1855.2_mRNA;ortholog_cluster=OG0007605;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 934466 935351 . - . ID=LTnewLM_310028100.2:pep;Derives_from=LTnewLM_310028100.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 934466 937493 . - . ID=LTnewLM_310028100:pseudogene;coverage=0.976;sequence_ID=0.884;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.1855_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 934466 935239 . - . ID=LTnewLM_310028100.1;Parent=LTnewLM_310028100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 934466 934924 . - . ID=LTnewLM_310028100.1:pseudogenic_exon:1;Parent=LTnewLM_310028100.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 934466 937493 . - . ID=LTnewLM_310028100.2;Parent=LTnewLM_310028100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 934466 935351 . - . ID=LTnewLM_310028100.2:pseudogenic_exon:1;Parent=LTnewLM_310028100.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 941062 942141 1 - . ID=LTnewLM_310028200 LTnewLM_31 AUGUSTUS mRNA 941062 942141 1 - . ID=LTnewLM_310028200.1;Parent=LTnewLM_310028200 LTnewLM_31 AUGUSTUS CDS 941062 942141 1 - 0 ID=LTnewLM_310028200.1:CDS:1;Parent=LTnewLM_310028200.1 ### LTnewLM_31 . polypeptide 941062 942141 . - . ID=LTnewLM_310028200.1:pep;Derives_from=LTnewLM_310028200.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 944100 944795 1 - . ID=LTnewLM_310028300 LTnewLM_31 AUGUSTUS mRNA 944100 944795 1 - . ID=LTnewLM_310028300.1;Parent=LTnewLM_310028300 LTnewLM_31 AUGUSTUS CDS 944100 944795 1 - 0 ID=LTnewLM_310028300.1:CDS:1;Parent=LTnewLM_310028300.1 ### LTnewLM_31 . polypeptide 944100 944795 . - . ID=LTnewLM_310028300.1:pep;Derives_from=LTnewLM_310028300.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 948708 949511 1 - . ID=LTnewLM_310028400 LTnewLM_31 AUGUSTUS mRNA 948708 949511 1 - . ID=LTnewLM_310028400.1;Parent=LTnewLM_310028400 LTnewLM_31 AUGUSTUS CDS 948708 949511 1 - 0 ID=LTnewLM_310028400.1:CDS:1;Parent=LTnewLM_310028400.1 ### LTnewLM_31 . polypeptide 948708 949511 . - . ID=LTnewLM_310028400.1:pep;Derives_from=LTnewLM_310028400.1;orthologous_to=LmjF.31.1860_mRNA;ortholog_cluster=OG0004532;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 953984 954484 1 - . ID=LTnewLM_310028500 LTnewLM_31 AUGUSTUS mRNA 953984 954484 1 - . ID=LTnewLM_310028500.1;Parent=LTnewLM_310028500 LTnewLM_31 AUGUSTUS CDS 953984 954484 1 - 0 ID=LTnewLM_310028500.1:CDS:1;Parent=LTnewLM_310028500.1 ### LTnewLM_31 . polypeptide 953984 954484 . - . ID=LTnewLM_310028500.1:pep;Derives_from=LTnewLM_310028500.1;orthologous_to=LTnewLM_330038800.1;ortholog_cluster=OG0004533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 961424 964354 0.47 - . ID=LTnewLM_310028600 LTnewLM_31 AUGUSTUS mRNA 961424 964354 0.47 - . ID=LTnewLM_310028600.1;Parent=LTnewLM_310028600 LTnewLM_31 AUGUSTUS CDS 961424 964354 0.47 - 0 ID=LTnewLM_310028600.1:CDS:1;Parent=LTnewLM_310028600.1 ### LTnewLM_31 . polypeptide 961424 964354 . - . ID=LTnewLM_310028600.1:pep;Derives_from=LTnewLM_310028600.1;orthologous_to=LTnewLM_270035900.1,LmjF.31.1870_mRNA,LmjF.31.1880_mRNA;ortholog_cluster=OG0000196;product=term%3DGlycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13692|Pfam:PF00534|Pfam:PF13524;Ontology_term=GO:0009058 LTnewLM_31 Pfam protein_match 961475 961795 . - . Parent=LTnewLM_310028600.1:pep;Name=PF13524;signature_desc=Glycosyl transferases group 1 LTnewLM_31 Pfam protein_match 961517 961873 . - . Parent=LTnewLM_310028600.1:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_31 Pfam protein_match 961700 961876 . - . Parent=LTnewLM_310028600.1:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_31 . pseudogene 967543 970127 . - . ID=LTnewLM_310028700:pseudogene;coverage=0.880;sequence_ID=0.850;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1870_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 967543 970127 . - . ID=LTnewLM_310028700.1;Parent=LTnewLM_310028700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 967543 970127 . - . ID=LTnewLM_310028700.1:pseudogenic_exon:1;Parent=LTnewLM_310028700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 967543 970127 . - . ID=LTnewLM_310028700.1:pep;Derives_from=LTnewLM_310028700.1;product=term%3Dhypothetical protein ### LTnewLM_31 Liftoff gene 974954 976693 . - . ID=LTnewLM_310028800;coverage=0.998;sequence_ID=0.966;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1890_0 LTnewLM_31 Liftoff mRNA 974954 976693 . - . ID=LTnewLM_310028800.1;Parent=LTnewLM_310028800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 974954 976693 . - 0 ID=LTnewLM_310028800.1:CDS:1;Parent=LTnewLM_310028800.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 974954 976693 . - . ID=LTnewLM_310028800.1:pep;Derives_from=LTnewLM_310028800.1;orthologous_to=LTnewLM_310030500.1,LmjF.31.1890_mRNA,LmjF.31.2020_mRNA;ortholog_cluster=OG0000226;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 974990 976087 . - . Parent=LTnewLM_310028800.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_31 Pfam protein_match 975287 975751 . - . Parent=LTnewLM_310028800.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_31 AUGUSTUS gene 977100 977486 1 - . ID=LTnewLM_310028900 LTnewLM_31 AUGUSTUS mRNA 977100 977486 1 - . ID=LTnewLM_310028900.1;Parent=LTnewLM_310028900 LTnewLM_31 AUGUSTUS CDS 977100 977486 1 - 0 ID=LTnewLM_310028900.1:CDS:1;Parent=LTnewLM_310028900.1 ### LTnewLM_31 . polypeptide 977100 977486 . - . ID=LTnewLM_310028900.1:pep;Derives_from=LTnewLM_310028900.1;orthologous_to=LTnewLM_310030600.1,LmjF.31.1900_mRNA,LmjF.31.2030_mRNA;ortholog_cluster=OG0000227;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain/Ribosomal L40e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF14560|Pfam:PF01020;Ontology_term=GO:0005840,GO:0005515,GO:0003735,GO:0006412 LTnewLM_31 Pfam protein_match 977109 977255 . - . Parent=LTnewLM_310028900.1:pep;Name=PF01020;signature_desc=Ribosomal L40e family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_31 Pfam protein_match 977268 977480 . - . Parent=LTnewLM_310028900.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 977277 977486 . - . Parent=LTnewLM_310028900.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_31 Pfam protein_match 977286 977447 . - . Parent=LTnewLM_310028900.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 980280 982829 1 - . ID=LTnewLM_310029000 LTnewLM_31 AUGUSTUS mRNA 980280 982829 1 - . ID=LTnewLM_310029000.1;Parent=LTnewLM_310029000 LTnewLM_31 AUGUSTUS CDS 980280 982829 1 - 0 ID=LTnewLM_310029000.1:CDS:1;Parent=LTnewLM_310029000.1 ### LTnewLM_31 . polypeptide 980280 982829 . - . ID=LTnewLM_310029000.1:pep;Derives_from=LTnewLM_310029000.1;orthologous_to=LmjF.31.1910_mRNA;ortholog_cluster=OG0004534;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 984503 991060 0.59 - . ID=LTnewLM_310029100 LTnewLM_31 AUGUSTUS mRNA 984503 991060 0.59 - . ID=LTnewLM_310029100.1;Parent=LTnewLM_310029100 LTnewLM_31 AUGUSTUS CDS 984503 984803 0.59 - 1 ID=LTnewLM_310029100.1:CDS:1;Parent=LTnewLM_310029100.1 LTnewLM_31 AUGUSTUS CDS 987192 991060 0.63 - 0 ID=LTnewLM_310029100.1:CDS:2;Parent=LTnewLM_310029100.1 ### LTnewLM_31 . polypeptide 984503 991060 . - . ID=LTnewLM_310029100.1:pep;Derives_from=LTnewLM_310029100.1;orthologous_to=LmjF.31.1920_mRNA;ortholog_cluster=OG0004535;product=term%3DRING-variant domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12906;Ontology_term=GO:0008270 LTnewLM_31 Pfam protein_match 988154 988306 . - . Parent=LTnewLM_310029100.1:pep;Name=PF12906;signature_desc=RING-variant domain;Ontology_term=GO:0008270 ### LTnewLM_31 AUGUSTUS gene 992824 994806 1 - . ID=LTnewLM_310029200 LTnewLM_31 AUGUSTUS mRNA 992824 994806 1 - . ID=LTnewLM_310029200.1;Parent=LTnewLM_310029200 LTnewLM_31 AUGUSTUS CDS 992824 994806 1 - 0 ID=LTnewLM_310029200.1:CDS:1;Parent=LTnewLM_310029200.1 ### LTnewLM_31 . polypeptide 992824 994806 . - . ID=LTnewLM_310029200.1:pep;Derives_from=LTnewLM_310029200.1;orthologous_to=LmjF.31.1930_mRNA;ortholog_cluster=OG0004536;product=term%3DDihydrouridine synthase (Dus)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01207;Ontology_term=GO:0008033,GO:0055114,GO:0050660,GO:0017150 LTnewLM_31 Pfam protein_match 993175 993657 . - . Parent=LTnewLM_310029200.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 LTnewLM_31 Pfam protein_match 993793 993969 . - . Parent=LTnewLM_310029200.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 LTnewLM_31 Pfam protein_match 994333 994458 . - . Parent=LTnewLM_310029200.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 ### LTnewLM_31 AUGUSTUS gene 997827 999263 1 - . ID=LTnewLM_310029300 LTnewLM_31 AUGUSTUS mRNA 997827 999263 1 - . ID=LTnewLM_310029300.1;Parent=LTnewLM_310029300 LTnewLM_31 AUGUSTUS CDS 997827 999263 1 - 0 ID=LTnewLM_310029300.1:CDS:1;Parent=LTnewLM_310029300.1 ### LTnewLM_31 . polypeptide 997827 999263 . - . ID=LTnewLM_310029300.1:pep;Derives_from=LTnewLM_310029300.1;orthologous_to=LmjF.31.1940_mRNA;ortholog_cluster=OG0004537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1000872 1002590 1 - . ID=LTnewLM_310029400 LTnewLM_31 AUGUSTUS mRNA 1000872 1002590 1 - . ID=LTnewLM_310029400.1;Parent=LTnewLM_310029400 LTnewLM_31 AUGUSTUS CDS 1000872 1002590 1 - 0 ID=LTnewLM_310029400.1:CDS:1;Parent=LTnewLM_310029400.1 ### LTnewLM_31 . polypeptide 1000872 1002590 . - . ID=LTnewLM_310029400.1:pep;Derives_from=LTnewLM_310029400.1;orthologous_to=LmjF.31.1950_mRNA;ortholog_cluster=OG0004538;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1005570 1006130 1 - . ID=LTnewLM_310029500 LTnewLM_31 AUGUSTUS mRNA 1005570 1006130 1 - . ID=LTnewLM_310029500.1;Parent=LTnewLM_310029500 LTnewLM_31 AUGUSTUS CDS 1005570 1006130 1 - 0 ID=LTnewLM_310029500.1:CDS:1;Parent=LTnewLM_310029500.1 ### LTnewLM_31 . polypeptide 1005570 1006130 . - . ID=LTnewLM_310029500.1:pep;Derives_from=LTnewLM_310029500.1;orthologous_to=LmjF.31.1960_mRNA;ortholog_cluster=OG0004539;product=term%3DRedoxin/Thioredoxin/Thioredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08534|Pfam:PF00085|Pfam:PF13905;Ontology_term=GO:0045454,GO:0016491 LTnewLM_31 Pfam protein_match 1005771 1006040 . - . Parent=LTnewLM_310029500.1:pep;Name=PF13905;signature_desc=Thioredoxin-like LTnewLM_31 Pfam protein_match 1005798 1006103 . - . Parent=LTnewLM_310029500.1:pep;Name=PF08534;signature_desc=Redoxin;Ontology_term=GO:0016491 LTnewLM_31 Pfam protein_match 1005897 1006055 . - . Parent=LTnewLM_310029500.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_31 AUGUSTUS gene 1007821 1008099 1 - . ID=LTnewLM_310029600 LTnewLM_31 AUGUSTUS mRNA 1007821 1008099 1 - . ID=LTnewLM_310029600.1;Parent=LTnewLM_310029600 LTnewLM_31 AUGUSTUS CDS 1007821 1008099 1 - 0 ID=LTnewLM_310029600.1:CDS:1;Parent=LTnewLM_310029600.1 ### LTnewLM_31 . polypeptide 1007821 1008099 . - . ID=LTnewLM_310029600.1:pep;Derives_from=LTnewLM_310029600.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1009034 1009582 0.86 - . ID=LTnewLM_310029700 LTnewLM_31 AUGUSTUS mRNA 1009034 1009582 0.86 - . ID=LTnewLM_310029700.1;Parent=LTnewLM_310029700 LTnewLM_31 AUGUSTUS CDS 1009034 1009071 0.99 - 2 ID=LTnewLM_310029700.1:CDS:1;Parent=LTnewLM_310029700.1 LTnewLM_31 AUGUSTUS CDS 1009408 1009582 0.86 - 0 ID=LTnewLM_310029700.1:CDS:2;Parent=LTnewLM_310029700.1 ### LTnewLM_31 . polypeptide 1009034 1009582 . - . ID=LTnewLM_310029700.1:pep;Derives_from=LTnewLM_310029700.1;orthologous_to=LmjF.31.1970_mRNA;ortholog_cluster=OG0004540;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_31 Pfam protein_match 1009412 1009519 . - . Parent=LTnewLM_310029700.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_31 . pseudogene 1010844 1011500 . - . ID=LTnewLM_310029800:pseudogene;coverage=0.990;sequence_ID=0.900;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1980_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1010844 1011500 . - . ID=LTnewLM_310029800.1;Parent=LTnewLM_310029800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1010844 1011500 . - . ID=LTnewLM_310029800.1:pseudogenic_exon:1;Parent=LTnewLM_310029800.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1010844 1011500 . - . ID=LTnewLM_310029800.1:pep;Derives_from=LTnewLM_310029800.1;orthologous_to=LmjF.31.1980_mRNA;ortholog_cluster=OG0007606;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1015834 1018035 . - . ID=LTnewLM_310029900:pseudogene;coverage=0.996;sequence_ID=0.898;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.1990_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1015834 1018035 . - . ID=LTnewLM_310029900.1;Parent=LTnewLM_310029900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1015834 1018035 . - . ID=LTnewLM_310029900.1:pseudogenic_exon:1;Parent=LTnewLM_310029900.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1015834 1018035 . - . ID=LTnewLM_310029900.1:pep;Derives_from=LTnewLM_310029900.1;orthologous_to=LmjF.31.1990_mRNA;ortholog_cluster=OG0007607;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1018163 1019418 0.48 - . ID=LTnewLM_310030000 LTnewLM_31 AUGUSTUS mRNA 1018163 1019418 0.48 - . ID=LTnewLM_310030000.1;Parent=LTnewLM_310030000 LTnewLM_31 AUGUSTUS CDS 1018163 1018224 0.65 - 2 ID=LTnewLM_310030000.1:CDS:1;Parent=LTnewLM_310030000.1 LTnewLM_31 AUGUSTUS CDS 1018275 1019418 0.57 - 0 ID=LTnewLM_310030000.1:CDS:2;Parent=LTnewLM_310030000.1 ### LTnewLM_31 . polypeptide 1018163 1019418 . - . ID=LTnewLM_310030000.1:pep;Derives_from=LTnewLM_310030000.1;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1020739 1021838 482 - . ID=LTnewLM_310030100:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.29.1570:mRNA 8 377;original_prot_length=402 LTnewLM_31 . pseudogenic_transcript 1020739 1021838 . - . ID=LTnewLM_310030100.1;Parent=LTnewLM_310030100:pseudogene LTnewLM_31 . pseudogenic_exon 1020739 1021038 . - . ID=LTnewLM_310030100.1:pseudogenic_exon:1;Parent=LTnewLM_310030100.1 LTnewLM_31 . pseudogenic_exon 1021041 1021205 . - . ID=LTnewLM_310030100.1:pseudogenic_exon:2;Parent=LTnewLM_310030100.1 LTnewLM_31 . pseudogenic_exon 1021208 1021378 . - . ID=LTnewLM_310030100.1:pseudogenic_exon:3;Parent=LTnewLM_310030100.1 LTnewLM_31 . pseudogenic_exon 1021381 1021638 . - . ID=LTnewLM_310030100.1:pseudogenic_exon:4;Parent=LTnewLM_310030100.1 LTnewLM_31 . pseudogenic_exon 1021641 1021838 . - . ID=LTnewLM_310030100.1:pseudogenic_exon:5;Parent=LTnewLM_310030100.1 ### LTnewLM_31 . polypeptide 1020739 1021838 . - . ID=LTnewLM_310030100.1:pep;Derives_from=LTnewLM_310030100.1;orthologous_to=LTnewLM_290023000.1,LTnewLM_310039800.1,LmjF.29.1570_mRNA;ortholog_cluster=OG0000207;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1022877 1023098 1 - . ID=LTnewLM_310030200 LTnewLM_31 AUGUSTUS mRNA 1022877 1023098 1 - . ID=LTnewLM_310030200.1;Parent=LTnewLM_310030200 LTnewLM_31 AUGUSTUS CDS 1022877 1023098 1 - 0 ID=LTnewLM_310030200.1:CDS:1;Parent=LTnewLM_310030200.1 ### LTnewLM_31 . polypeptide 1022877 1023098 . - . ID=LTnewLM_310030200.1:pep;Derives_from=LTnewLM_310030200.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1024968 1026878 1 - . ID=LTnewLM_310030300 LTnewLM_31 AUGUSTUS mRNA 1024968 1026878 1 - . ID=LTnewLM_310030300.1;Parent=LTnewLM_310030300 LTnewLM_31 AUGUSTUS CDS 1024968 1026878 1 - 0 ID=LTnewLM_310030300.1:CDS:1;Parent=LTnewLM_310030300.1 ### LTnewLM_31 . polypeptide 1024968 1026878 . - . ID=LTnewLM_310030300.1:pep;Derives_from=LTnewLM_310030300.1;orthologous_to=LmjF.31.2000_mRNA;ortholog_cluster=OG0004541;product=term%3DLeishmanolysin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01457;Ontology_term=GO:0004222,GO:0007155,GO:0016020,GO:0006508 LTnewLM_31 Pfam protein_match 1025112 1026635 . - . Parent=LTnewLM_310030300.1:pep;Name=PF01457;signature_desc=Leishmanolysin;Ontology_term=GO:0004222,GO:0006508,GO:0007155,GO:0016020 ### LTnewLM_31 AUGUSTUS gene 1029246 1031066 1 - . ID=LTnewLM_310030400 LTnewLM_31 AUGUSTUS mRNA 1029246 1031066 1 - . ID=LTnewLM_310030400.1;Parent=LTnewLM_310030400 LTnewLM_31 AUGUSTUS CDS 1029246 1031066 1 - 0 ID=LTnewLM_310030400.1:CDS:1;Parent=LTnewLM_310030400.1 ### LTnewLM_31 . polypeptide 1029246 1031066 . - . ID=LTnewLM_310030400.1:pep;Derives_from=LTnewLM_310030400.1;orthologous_to=LmjF.31.2010_mRNA;ortholog_cluster=OG0004542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1034632 1036364 . - . ID=LTnewLM_310030500:pseudogene;coverage=0.998;sequence_ID=0.970;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2020_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1034632 1036364 . - . ID=LTnewLM_310030500.1;Parent=LTnewLM_310030500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1034632 1036364 . - . ID=LTnewLM_310030500.1:pseudogenic_exon:1;Parent=LTnewLM_310030500.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1034632 1036364 . - . ID=LTnewLM_310030500.1:pep;Derives_from=LTnewLM_310030500.1;orthologous_to=LTnewLM_310028800.1,LmjF.31.1890_mRNA,LmjF.31.2020_mRNA;ortholog_cluster=OG0000226;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1036735 1037121 1 - . ID=LTnewLM_310030600 LTnewLM_31 AUGUSTUS mRNA 1036735 1037121 1 - . ID=LTnewLM_310030600.1;Parent=LTnewLM_310030600 LTnewLM_31 AUGUSTUS CDS 1036735 1037121 1 - 0 ID=LTnewLM_310030600.1:CDS:1;Parent=LTnewLM_310030600.1 ### LTnewLM_31 . polypeptide 1036735 1037121 . - . ID=LTnewLM_310030600.1:pep;Derives_from=LTnewLM_310030600.1;orthologous_to=LTnewLM_310028900.1,LmjF.31.1900_mRNA,LmjF.31.2030_mRNA;ortholog_cluster=OG0000227;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain/Ribosomal L40e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF14560|Pfam:PF01020;Ontology_term=GO:0005840,GO:0005515,GO:0003735,GO:0006412 LTnewLM_31 Pfam protein_match 1036744 1036890 . - . Parent=LTnewLM_310030600.1:pep;Name=PF01020;signature_desc=Ribosomal L40e family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_31 Pfam protein_match 1036903 1037115 . - . Parent=LTnewLM_310030600.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_31 Pfam protein_match 1036912 1037121 . - . Parent=LTnewLM_310030600.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_31 Pfam protein_match 1036921 1037082 . - . Parent=LTnewLM_310030600.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_31 AUGUSTUS gene 1039031 1040533 1 - . ID=LTnewLM_310030700 LTnewLM_31 AUGUSTUS mRNA 1039031 1040533 1 - . ID=LTnewLM_310030700.1;Parent=LTnewLM_310030700 LTnewLM_31 AUGUSTUS CDS 1039031 1040533 1 - 0 ID=LTnewLM_310030700.1:CDS:1;Parent=LTnewLM_310030700.1 ### LTnewLM_31 . polypeptide 1039031 1040533 . - . ID=LTnewLM_310030700.1:pep;Derives_from=LTnewLM_310030700.1;orthologous_to=LmjF.31.2040_mRNA;ortholog_cluster=OG0004543;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1043103 1044665 1 - . ID=LTnewLM_310030800 LTnewLM_31 AUGUSTUS mRNA 1043103 1044665 1 - . ID=LTnewLM_310030800.1;Parent=LTnewLM_310030800 LTnewLM_31 AUGUSTUS CDS 1043103 1044665 1 - 0 ID=LTnewLM_310030800.1:CDS:1;Parent=LTnewLM_310030800.1 ### LTnewLM_31 . polypeptide 1043103 1044665 . - . ID=LTnewLM_310030800.1:pep;Derives_from=LTnewLM_310030800.1;orthologous_to=LmjF.31.2050_mRNA;ortholog_cluster=OG0004544;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 1043613 1044188 . - . Parent=LTnewLM_310030800.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 AUGUSTUS gene 1047975 1049450 1 - . ID=LTnewLM_310030900 LTnewLM_31 AUGUSTUS mRNA 1047975 1049450 1 - . ID=LTnewLM_310030900.1;Parent=LTnewLM_310030900 LTnewLM_31 AUGUSTUS CDS 1047975 1049450 1 - 0 ID=LTnewLM_310030900.1:CDS:1;Parent=LTnewLM_310030900.1 ### LTnewLM_31 . polypeptide 1047975 1049450 . - . ID=LTnewLM_310030900.1:pep;Derives_from=LTnewLM_310030900.1;orthologous_to=LmjF.31.2060_mRNA;ortholog_cluster=OG0004545;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 1048467 1049009 . - . Parent=LTnewLM_310030900.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 . pseudogene 1050515 1051910 684 - . ID=LTnewLM_310031000:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.31.2050:mRNA 22 512;original_prot_length=518 LTnewLM_31 . pseudogenic_transcript 1050515 1051910 . - . ID=LTnewLM_310031000.1;Parent=LTnewLM_310031000:pseudogene LTnewLM_31 . pseudogenic_exon 1050515 1050742 . - . ID=LTnewLM_310031000.1:pseudogenic_exon:1;Parent=LTnewLM_310031000.1 LTnewLM_31 . pseudogenic_exon 1050744 1051910 . - . ID=LTnewLM_310031000.1:pseudogenic_exon:2;Parent=LTnewLM_310031000.1 ### LTnewLM_31 . polypeptide 1050515 1051910 . - . ID=LTnewLM_310031000.1:pep;Derives_from=LTnewLM_310031000.1;orthologous_to=LmjF.31.2070_mRNA;ortholog_cluster=OG0007608;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_31 Pfam protein_match 1050996 1051538 . - . Parent=LTnewLM_310031000.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_31 AUGUSTUS gene 1052737 1053589 1.55 - . ID=LTnewLM_310031100 LTnewLM_31 AUGUSTUS mRNA 1052737 1053589 0.55 - . ID=LTnewLM_310031100.1;Parent=LTnewLM_310031100 LTnewLM_31 AUGUSTUS CDS 1052737 1052757 0.61 - 0 ID=LTnewLM_310031100.1:CDS:1;Parent=LTnewLM_310031100.1 LTnewLM_31 AUGUSTUS CDS 1053230 1053589 0.86 - 0 ID=LTnewLM_310031100.1:CDS:2;Parent=LTnewLM_310031100.1 LTnewLM_31 AUGUSTUS mRNA 1053182 1053589 1 - . ID=LTnewLM_310031100.2;Parent=LTnewLM_310031100 LTnewLM_31 AUGUSTUS CDS 1053182 1053589 1 - 0 ID=LTnewLM_310031100.2:CDS:1;Parent=LTnewLM_310031100.2 ### LTnewLM_31 . polypeptide 1052737 1053589 . - . ID=LTnewLM_310031100.1:pep;Derives_from=LTnewLM_310031100.1;orthologous_to=LTnewLM_310031100.2;ortholog_cluster=OG0004546;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1053182 1053589 . - . ID=LTnewLM_310031100.2:pep;Derives_from=LTnewLM_310031100.2;orthologous_to=LTnewLM_310031100.1;ortholog_cluster=OG0004546;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1054841 1057330 . - . ID=LTnewLM_310031200:pseudogene;coverage=0.998;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2080_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1054841 1057330 . - . ID=LTnewLM_310031200.1;Parent=LTnewLM_310031200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1054841 1057330 . - . ID=LTnewLM_310031200.1:pseudogenic_exon:1;Parent=LTnewLM_310031200.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1054841 1057330 . - . ID=LTnewLM_310031200.1:pep;Derives_from=LTnewLM_310031200.1;orthologous_to=LmjF.31.2080_mRNA;ortholog_cluster=OG0007609;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1059829 1060980 1 - . ID=LTnewLM_310031300 LTnewLM_31 AUGUSTUS mRNA 1059829 1060980 1 - . ID=LTnewLM_310031300.1;Parent=LTnewLM_310031300 LTnewLM_31 AUGUSTUS CDS 1059829 1060980 1 - 0 ID=LTnewLM_310031300.1:CDS:1;Parent=LTnewLM_310031300.1 ### LTnewLM_31 . polypeptide 1059829 1060980 . - . ID=LTnewLM_310031300.1:pep;Derives_from=LTnewLM_310031300.1;orthologous_to=LmjF.31.2090_mRNA;ortholog_cluster=OG0004547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1064162 1064389 0.89 - . ID=LTnewLM_310031400 LTnewLM_31 AUGUSTUS mRNA 1064162 1064389 0.89 - . ID=LTnewLM_310031400.1;Parent=LTnewLM_310031400 LTnewLM_31 AUGUSTUS CDS 1064162 1064389 0.89 - 0 ID=LTnewLM_310031400.1:CDS:1;Parent=LTnewLM_310031400.1 ### LTnewLM_31 . polypeptide 1064162 1064389 . - . ID=LTnewLM_310031400.1:pep;Derives_from=LTnewLM_310031400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1064603 1065778 1 - . ID=LTnewLM_310031500 LTnewLM_31 AUGUSTUS mRNA 1064603 1065778 1 - . ID=LTnewLM_310031500.1;Parent=LTnewLM_310031500 LTnewLM_31 AUGUSTUS CDS 1064603 1065778 1 - 0 ID=LTnewLM_310031500.1:CDS:1;Parent=LTnewLM_310031500.1 ### LTnewLM_31 . polypeptide 1064603 1065778 . - . ID=LTnewLM_310031500.1:pep;Derives_from=LTnewLM_310031500.1;orthologous_to=LmjF.31.2100_mRNA;ortholog_cluster=OG0004548;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1069761 1070379 0.57 - . ID=LTnewLM_310031600 LTnewLM_31 AUGUSTUS mRNA 1069761 1070379 0.57 - . ID=LTnewLM_310031600.1;Parent=LTnewLM_310031600 LTnewLM_31 AUGUSTUS CDS 1069761 1069915 0.59 - 2 ID=LTnewLM_310031600.1:CDS:1;Parent=LTnewLM_310031600.1 LTnewLM_31 AUGUSTUS CDS 1070214 1070379 0.94 - 0 ID=LTnewLM_310031600.1:CDS:2;Parent=LTnewLM_310031600.1 ### LTnewLM_31 . polypeptide 1069761 1070379 . - . ID=LTnewLM_310031600.1:pep;Derives_from=LTnewLM_310031600.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1070489 1073536 0.99 - . ID=LTnewLM_310031700 LTnewLM_31 AUGUSTUS mRNA 1070489 1073536 0.99 - . ID=LTnewLM_310031700.1;Parent=LTnewLM_310031700 LTnewLM_31 AUGUSTUS CDS 1070489 1073536 0.99 - 0 ID=LTnewLM_310031700.1:CDS:1;Parent=LTnewLM_310031700.1 ### LTnewLM_31 . polypeptide 1070489 1073536 . - . ID=LTnewLM_310031700.1:pep;Derives_from=LTnewLM_310031700.1;orthologous_to=LmjF.31.2110_mRNA;ortholog_cluster=OG0004549;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1077602 1078681 1 - . ID=LTnewLM_310031800 LTnewLM_31 AUGUSTUS mRNA 1077602 1078681 1 - . ID=LTnewLM_310031800.1;Parent=LTnewLM_310031800 LTnewLM_31 AUGUSTUS CDS 1077602 1078681 1 - 0 ID=LTnewLM_310031800.1:CDS:1;Parent=LTnewLM_310031800.1 ### LTnewLM_31 . polypeptide 1077602 1078681 . - . ID=LTnewLM_310031800.1:pep;Derives_from=LTnewLM_310031800.1;orthologous_to=LmjF.31.2115_mRNA;ortholog_cluster=OG0004550;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1080428 1082719 1 - . ID=LTnewLM_310031900 LTnewLM_31 AUGUSTUS mRNA 1080428 1082719 1 - . ID=LTnewLM_310031900.1;Parent=LTnewLM_310031900 LTnewLM_31 AUGUSTUS CDS 1080428 1082719 1 - 0 ID=LTnewLM_310031900.1:CDS:1;Parent=LTnewLM_310031900.1 ### LTnewLM_31 . polypeptide 1080428 1082719 . - . ID=LTnewLM_310031900.1:pep;Derives_from=LTnewLM_310031900.1;orthologous_to=LmjF.31.2120_mRNA;ortholog_cluster=OG0004551;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1084979 1087771 1 - . ID=LTnewLM_310032000 LTnewLM_31 AUGUSTUS mRNA 1084979 1087771 1 - . ID=LTnewLM_310032000.1;Parent=LTnewLM_310032000 LTnewLM_31 AUGUSTUS CDS 1084979 1087771 1 - 0 ID=LTnewLM_310032000.1:CDS:1;Parent=LTnewLM_310032000.1 ### LTnewLM_31 . polypeptide 1084979 1087771 . - . ID=LTnewLM_310032000.1:pep;Derives_from=LTnewLM_310032000.1;orthologous_to=LmjF.31.2130_mRNA;ortholog_cluster=OG0004552;product=term%3DFungal tRNA ligase phosphodiesterase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08302;Ontology_term=GO:0003972,GO:0006388,GO:0005524 LTnewLM_31 Pfam protein_match 1085033 1085233 . - . Parent=LTnewLM_310032000.1:pep;Name=PF08302;signature_desc=Fungal tRNA ligase phosphodiesterase domain;Ontology_term=GO:0003972,GO:0005524,GO:0006388 ### LTnewLM_31 AUGUSTUS gene 1090555 1093701 1 - . ID=LTnewLM_310032100 LTnewLM_31 AUGUSTUS mRNA 1090555 1093701 1 - . ID=LTnewLM_310032100.1;Parent=LTnewLM_310032100 LTnewLM_31 AUGUSTUS CDS 1090555 1093701 1 - 0 ID=LTnewLM_310032100.1:CDS:1;Parent=LTnewLM_310032100.1 ### LTnewLM_31 . polypeptide 1090555 1093701 . - . ID=LTnewLM_310032100.1:pep;Derives_from=LTnewLM_310032100.1;orthologous_to=LmjF.31.2140_mRNA;ortholog_cluster=OG0004553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1096421 1097254 . - . ID=LTnewLM_310032200.1:pep;Derives_from=LTnewLM_310032200.1;orthologous_to=LTnewLM_310032200.2,LmjF.31.2150.1_mRNA,LmjF.31.2150.2_mRNA;ortholog_cluster=OG0000228;product=term%3DAldo/keto reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00248 LTnewLM_31 Pfam protein_match 1096469 1097215 . - . Parent=LTnewLM_310032200.1:pep;Name=PF00248;signature_desc=Aldo/keto reductase family ### LTnewLM_31 . polypeptide 1096421 1097275 . - . ID=LTnewLM_310032200.2:pep;Derives_from=LTnewLM_310032200.2;orthologous_to=LTnewLM_310032200.1,LmjF.31.2150.1_mRNA,LmjF.31.2150.2_mRNA;ortholog_cluster=OG0000228;product=term%3DAldo/keto reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00248 LTnewLM_31 Pfam protein_match 1096469 1097215 . - . Parent=LTnewLM_310032200.2:pep;Name=PF00248;signature_desc=Aldo/keto reductase family ### LTnewLM_31 Liftoff gene 1096421 1097363 . - . ID=LTnewLM_310032200;coverage=0.997;sequence_ID=0.956;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.31.2150_0 LTnewLM_31 Liftoff mRNA 1096421 1097257 . - . ID=LTnewLM_310032200.1;Parent=LTnewLM_310032200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1096421 1097254 . - 0 ID=LTnewLM_310032200.1:CDS:1;Parent=LTnewLM_310032200.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 1097255 1097257 . - . ID=LTnewLM_310032200:five_prime_UTR;Parent=LTnewLM_310032200.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 1096421 1097363 . - . ID=LTnewLM_310032200.2;Parent=LTnewLM_310032200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1096421 1097275 . - 0 ID=LTnewLM_310032200.2:CDS:1;Parent=LTnewLM_310032200.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 1097276 1097363 . - . ID=LTnewLM_310032200:five_prime_UTR.1;Parent=LTnewLM_310032200.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1101858 1104335 1 - . ID=LTnewLM_310032300 LTnewLM_31 AUGUSTUS mRNA 1101858 1104335 1 - . ID=LTnewLM_310032300.1;Parent=LTnewLM_310032300 LTnewLM_31 AUGUSTUS CDS 1101858 1104335 1 - 0 ID=LTnewLM_310032300.1:CDS:1;Parent=LTnewLM_310032300.1 ### LTnewLM_31 . polypeptide 1101858 1104335 . - . ID=LTnewLM_310032300.1:pep;Derives_from=LTnewLM_310032300.1;orthologous_to=LmjF.31.2160_mRNA;ortholog_cluster=OG0004554;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1107577 1111107 . - . ID=LTnewLM_310032400.1:pep;Derives_from=LTnewLM_310032400.1;orthologous_to=LTnewLM_310032400.2,LmjF.31.2170.1_mRNA,LmjF.31.2170.2_mRNA;ortholog_cluster=OG0000229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1107577 1111350 . - . ID=LTnewLM_310032400.2:pep;Derives_from=LTnewLM_310032400.2;orthologous_to=LTnewLM_310032400.1,LmjF.31.2170.1_mRNA,LmjF.31.2170.2_mRNA;ortholog_cluster=OG0000229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 1107577 1111742 . - . ID=LTnewLM_310032400;coverage=0.997;sequence_ID=0.930;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.31.2170_0 LTnewLM_31 Liftoff mRNA 1107577 1111288 . - . ID=LTnewLM_310032400.1;Parent=LTnewLM_310032400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1107577 1111107 . - 0 ID=LTnewLM_310032400.1:CDS:1;Parent=LTnewLM_310032400.1;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 1111108 1111288 . - . ID=LTnewLM_310032400:five_prime_UTR;Parent=LTnewLM_310032400.1;extra_copy_number=0 LTnewLM_31 Liftoff mRNA 1107577 1111742 . - . ID=LTnewLM_310032400.2;Parent=LTnewLM_310032400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1107577 1111350 . - 0 ID=LTnewLM_310032400.2:CDS:1;Parent=LTnewLM_310032400.2;extra_copy_number=0 LTnewLM_31 Liftoff five_prime_UTR 1111351 1111742 . - . ID=LTnewLM_310032400:five_prime_UTR.1;Parent=LTnewLM_310032400.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1116313 1119024 1 - . ID=LTnewLM_310032500 LTnewLM_31 AUGUSTUS mRNA 1116313 1119024 1 - . ID=LTnewLM_310032500.1;Parent=LTnewLM_310032500 LTnewLM_31 AUGUSTUS CDS 1116313 1119024 1 - 0 ID=LTnewLM_310032500.1:CDS:1;Parent=LTnewLM_310032500.1 ### LTnewLM_31 . polypeptide 1116313 1119024 . - . ID=LTnewLM_310032500.1:pep;Derives_from=LTnewLM_310032500.1;orthologous_to=LmjF.31.2180_mRNA;ortholog_cluster=OG0004555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1124008 1126314 1 - . ID=LTnewLM_310032600 LTnewLM_31 AUGUSTUS mRNA 1124008 1126314 1 - . ID=LTnewLM_310032600.1;Parent=LTnewLM_310032600 LTnewLM_31 AUGUSTUS CDS 1124008 1126314 1 - 0 ID=LTnewLM_310032600.1:CDS:1;Parent=LTnewLM_310032600.1 ### LTnewLM_31 . polypeptide 1124008 1126314 . - . ID=LTnewLM_310032600.1:pep;Derives_from=LTnewLM_310032600.1;orthologous_to=LmjF.31.2190_mRNA;ortholog_cluster=OG0004556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1134367 1136115 1 - . ID=LTnewLM_310032700 LTnewLM_31 AUGUSTUS mRNA 1134367 1136115 1 - . ID=LTnewLM_310032700.1;Parent=LTnewLM_310032700 LTnewLM_31 AUGUSTUS CDS 1134367 1136115 1 - 0 ID=LTnewLM_310032700.1:CDS:1;Parent=LTnewLM_310032700.1 ### LTnewLM_31 . polypeptide 1134367 1136115 . - . ID=LTnewLM_310032700.1:pep;Derives_from=LTnewLM_310032700.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1141114 1142571 1 - . ID=LTnewLM_310032800 LTnewLM_31 AUGUSTUS mRNA 1141114 1142571 1 - . ID=LTnewLM_310032800.1;Parent=LTnewLM_310032800 LTnewLM_31 AUGUSTUS CDS 1141114 1142571 1 - 0 ID=LTnewLM_310032800.1:CDS:1;Parent=LTnewLM_310032800.1 ### LTnewLM_31 . polypeptide 1141114 1142571 . - . ID=LTnewLM_310032800.1:pep;Derives_from=LTnewLM_310032800.1;orthologous_to=LmjF.31.2200_mRNA;ortholog_cluster=OG0004557;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1146814 1149336 . - . ID=LTnewLM_310032900.1:pep;Derives_from=LTnewLM_310032900.1;orthologous_to=LmjF.31.2210.1_mRNA,LmjF.31.2210.2_mRNA;ortholog_cluster=OG0000535;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1146814 1149830 . - . ID=LTnewLM_310032900.2:pep;Derives_from=LTnewLM_310032900.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1146814 1150170 . - . ID=LTnewLM_310032900:pseudogene;coverage=0.994;sequence_ID=0.903;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2210_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1146814 1149390 . - . ID=LTnewLM_310032900.1;Parent=LTnewLM_310032900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1146814 1149336 . - . ID=LTnewLM_310032900.1:pseudogenic_exon:1;Parent=LTnewLM_310032900.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1146814 1150170 . - . ID=LTnewLM_310032900.2;Parent=LTnewLM_310032900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1146814 1149830 . - . ID=LTnewLM_310032900.2:pseudogenic_exon:1;Parent=LTnewLM_310032900.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1150701 1157588 1 - . ID=LTnewLM_310033000 LTnewLM_31 AUGUSTUS mRNA 1150701 1157588 1 - . ID=LTnewLM_310033000.1;Parent=LTnewLM_310033000 LTnewLM_31 AUGUSTUS CDS 1150701 1157588 1 - 0 ID=LTnewLM_310033000.1:CDS:1;Parent=LTnewLM_310033000.1 ### LTnewLM_31 . polypeptide 1150701 1157588 . - . ID=LTnewLM_310033000.1:pep;Derives_from=LTnewLM_310033000.1;orthologous_to=LmjF.31.2220_mRNA;ortholog_cluster=OG0004558;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1159198 1160538 1 - . ID=LTnewLM_310033100 LTnewLM_31 AUGUSTUS mRNA 1159198 1160538 1 - . ID=LTnewLM_310033100.1;Parent=LTnewLM_310033100 LTnewLM_31 AUGUSTUS CDS 1159198 1160538 1 - 0 ID=LTnewLM_310033100.1:CDS:1;Parent=LTnewLM_310033100.1 ### LTnewLM_31 . polypeptide 1159198 1160538 . - . ID=LTnewLM_310033100.1:pep;Derives_from=LTnewLM_310033100.1;orthologous_to=LmjF.31.2230_mRNA;ortholog_cluster=OG0004559;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1164047 1164505 1 - . ID=LTnewLM_310033200 LTnewLM_31 AUGUSTUS mRNA 1164047 1164505 1 - . ID=LTnewLM_310033200.1;Parent=LTnewLM_310033200 LTnewLM_31 AUGUSTUS CDS 1164047 1164505 1 - 0 ID=LTnewLM_310033200.1:CDS:1;Parent=LTnewLM_310033200.1 ### LTnewLM_31 . polypeptide 1164047 1164505 . - . ID=LTnewLM_310033200.1:pep;Derives_from=LTnewLM_310033200.1;orthologous_to=LmjF.31.2240_mRNA;ortholog_cluster=OG0004560;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 1165294 1166436 . - . ID=LTnewLM_310033300;coverage=1.0;sequence_ID=0.953;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2250_0 LTnewLM_31 Liftoff mRNA 1165294 1166436 . - . ID=LTnewLM_310033300.1;Parent=LTnewLM_310033300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1165294 1166436 . - 0 ID=LTnewLM_310033300.1:CDS:1;Parent=LTnewLM_310033300.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1165294 1166436 . - . ID=LTnewLM_310033300.1:pep;Derives_from=LTnewLM_310033300.1;orthologous_to=LTnewLM_310034300.1,LmjF.31.2250_mRNA,LmjF.31.2330_mRNA;ortholog_cluster=OG0000230;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_31 Pfam protein_match 1165315 1166082 . - . Parent=LTnewLM_310033300.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_31 Pfam protein_match 1165741 1166043 . - . Parent=LTnewLM_310033300.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_31 AUGUSTUS gene 1166763 1168628 1 - . ID=LTnewLM_310033400 LTnewLM_31 AUGUSTUS mRNA 1166763 1168628 1 - . ID=LTnewLM_310033400.1;Parent=LTnewLM_310033400 LTnewLM_31 AUGUSTUS CDS 1166763 1168628 1 - 0 ID=LTnewLM_310033400.1:CDS:1;Parent=LTnewLM_310033400.1 ### LTnewLM_31 . polypeptide 1166763 1168628 . - . ID=LTnewLM_310033400.1:pep;Derives_from=LTnewLM_310033400.1;orthologous_to=LmjF.31.2260_mRNA;ortholog_cluster=OG0004561;product=term%3DPeptidase M1 N-terminal domain/Peptidase family M1 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17900|Pfam:PF01433;Ontology_term=GO:0008237,GO:0008270 LTnewLM_31 Pfam protein_match 1166898 1167470 . - . Parent=LTnewLM_310033400.1:pep;Name=PF01433;signature_desc=Peptidase family M1 domain;Ontology_term=GO:0008237,GO:0008270 LTnewLM_31 Pfam protein_match 1167699 1168025 . - . Parent=LTnewLM_310033400.1:pep;Name=PF17900;signature_desc=Peptidase M1 N-terminal domain ### LTnewLM_31 AUGUSTUS gene 1169874 1171262 1 - . ID=LTnewLM_310033500 LTnewLM_31 AUGUSTUS mRNA 1169874 1171262 1 - . ID=LTnewLM_310033500.1;Parent=LTnewLM_310033500 LTnewLM_31 AUGUSTUS CDS 1169874 1171262 1 - 0 ID=LTnewLM_310033500.1:CDS:1;Parent=LTnewLM_310033500.1 ### LTnewLM_31 . polypeptide 1169874 1171262 . - . ID=LTnewLM_310033500.1:pep;Derives_from=LTnewLM_310033500.1;orthologous_to=LmjF.31.2270_mRNA;ortholog_cluster=OG0004562;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1174477 1175025 1 - . ID=LTnewLM_310033600 LTnewLM_31 AUGUSTUS mRNA 1174477 1175025 1 - . ID=LTnewLM_310033600.1;Parent=LTnewLM_310033600 LTnewLM_31 AUGUSTUS CDS 1174477 1175025 1 - 0 ID=LTnewLM_310033600.1:CDS:1;Parent=LTnewLM_310033600.1 ### LTnewLM_31 . polypeptide 1174477 1175025 . - . ID=LTnewLM_310033600.1:pep;Derives_from=LTnewLM_310033600.1;orthologous_to=LmjF.31.2280_mRNA;ortholog_cluster=OG0004563;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family/Gtr1/RagA G protein conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF01926|Pfam:PF08477|Pfam:PF00071|Pfam:PF04670;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_31 Pfam protein_match 1174498 1175007 . - . Parent=LTnewLM_310033600.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_31 Pfam protein_match 1174510 1174971 . - . Parent=LTnewLM_310033600.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_31 Pfam protein_match 1174600 1174977 . - . Parent=LTnewLM_310033600.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_31 Pfam protein_match 1174612 1174968 . - . Parent=LTnewLM_310033600.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_31 Pfam protein_match 1174642 1174971 . - . Parent=LTnewLM_310033600.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_31 Pfam protein_match 1174666 1174971 . - . Parent=LTnewLM_310033600.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_31 Liftoff gene 1177983 1178660 . - . ID=LTnewLM_310033700;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2290_0 LTnewLM_31 Liftoff mRNA 1177983 1178660 . - . ID=LTnewLM_310033700.1;Parent=LTnewLM_310033700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1177983 1178660 . - 0 ID=LTnewLM_310033700.1:CDS:1;Parent=LTnewLM_310033700.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1177983 1178660 . - . ID=LTnewLM_310033700.1:pep;Derives_from=LTnewLM_310033700.1;orthologous_to=LmjF.31.2290_mRNA;ortholog_cluster=OG0004564;product=term%3DPhospholipid methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04191 LTnewLM_31 Pfam protein_match 1178037 1178336 . - . Parent=LTnewLM_310033700.1:pep;Name=PF04191;signature_desc=Phospholipid methyltransferase ### LTnewLM_31 AUGUSTUS gene 1180238 1180528 1 - . ID=LTnewLM_310033800 LTnewLM_31 AUGUSTUS mRNA 1180238 1180528 1 - . ID=LTnewLM_310033800.1;Parent=LTnewLM_310033800 LTnewLM_31 AUGUSTUS CDS 1180238 1180528 1 - 0 ID=LTnewLM_310033800.1:CDS:1;Parent=LTnewLM_310033800.1 ### LTnewLM_31 . polypeptide 1180238 1180528 . - . ID=LTnewLM_310033800.1:pep;Derives_from=LTnewLM_310033800.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1181037 1181324 1 - . ID=LTnewLM_310033900 LTnewLM_31 AUGUSTUS mRNA 1181037 1181324 1 - . ID=LTnewLM_310033900.1;Parent=LTnewLM_310033900 LTnewLM_31 AUGUSTUS CDS 1181037 1181324 1 - 0 ID=LTnewLM_310033900.1:CDS:1;Parent=LTnewLM_310033900.1 ### LTnewLM_31 . polypeptide 1181037 1181324 . - . ID=LTnewLM_310033900.1:pep;Derives_from=LTnewLM_310033900.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1183096 1184244 0.6 - . ID=LTnewLM_310034000 LTnewLM_31 AUGUSTUS mRNA 1183096 1184244 0.6 - . ID=LTnewLM_310034000.1;Parent=LTnewLM_310034000 LTnewLM_31 AUGUSTUS CDS 1183096 1184148 0.65 - 0 ID=LTnewLM_310034000.1:CDS:1;Parent=LTnewLM_310034000.1 LTnewLM_31 AUGUSTUS CDS 1184197 1184244 0.92 - 0 ID=LTnewLM_310034000.1:CDS:2;Parent=LTnewLM_310034000.1 ### LTnewLM_31 . polypeptide 1183096 1184244 . - . ID=LTnewLM_310034000.1:pep;Derives_from=LTnewLM_310034000.1;orthologous_to=LmjF.31.2300_mRNA;ortholog_cluster=OG0004565;product=term%3DS1/P1 Nuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02265;Ontology_term=GO:0004519,GO:0006308,GO:0003676 LTnewLM_31 Pfam protein_match 1183399 1184196 . - . Parent=LTnewLM_310034000.1:pep;Name=PF02265;signature_desc=S1/P1 Nuclease;Ontology_term=GO:0003676,GO:0004519,GO:0006308 ### LTnewLM_31 AUGUSTUS gene 1186023 1187159 1 - . ID=LTnewLM_310034100 LTnewLM_31 AUGUSTUS mRNA 1186023 1187159 1 - . ID=LTnewLM_310034100.1;Parent=LTnewLM_310034100 LTnewLM_31 AUGUSTUS CDS 1186023 1187159 1 - 0 ID=LTnewLM_310034100.1:CDS:1;Parent=LTnewLM_310034100.1 ### LTnewLM_31 . polypeptide 1186023 1187159 . - . ID=LTnewLM_310034100.1:pep;Derives_from=LTnewLM_310034100.1;orthologous_to=LmjF.31.2310_mRNA;ortholog_cluster=OG0004566;product=term%3DS1/P1 Nuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02265;Ontology_term=GO:0004519,GO:0006308,GO:0003676 LTnewLM_31 Pfam protein_match 1186272 1187081 . - . Parent=LTnewLM_310034100.1:pep;Name=PF02265;signature_desc=S1/P1 Nuclease;Ontology_term=GO:0003676,GO:0004519,GO:0006308 ### LTnewLM_31 AUGUSTUS gene 1187639 1190365 1 - . ID=LTnewLM_310034200 LTnewLM_31 AUGUSTUS mRNA 1187639 1190365 1 - . ID=LTnewLM_310034200.1;Parent=LTnewLM_310034200 LTnewLM_31 AUGUSTUS CDS 1187639 1190365 1 - 0 ID=LTnewLM_310034200.1:CDS:1;Parent=LTnewLM_310034200.1 ### LTnewLM_31 . polypeptide 1187639 1190365 . - . ID=LTnewLM_310034200.1:pep;Derives_from=LTnewLM_310034200.1;orthologous_to=LmjF.31.2320_mRNA;ortholog_cluster=OG0004567;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_31 Pfam protein_match 1188008 1188151 . - . Parent=LTnewLM_310034200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_31 Pfam protein_match 1189106 1190074 . - . Parent=LTnewLM_310034200.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_31 Pfam protein_match 1189571 1190128 . - . Parent=LTnewLM_310034200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_31 . pseudogene 1193176 1194339 1.86e+03 - . ID=LTnewLM_310034300:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.31.2250:mRNA 1 381;original_prot_length=381 LTnewLM_31 . pseudogenic_transcript 1193176 1194339 . - . ID=LTnewLM_310034300.1;Parent=LTnewLM_310034300:pseudogene LTnewLM_31 . pseudogenic_exon 1193176 1194339 . - . ID=LTnewLM_310034300.1:pseudogenic_exon:1;Parent=LTnewLM_310034300.1 ### LTnewLM_31 . polypeptide 1193176 1194339 . - . ID=LTnewLM_310034300.1:pep;Derives_from=LTnewLM_310034300.1;orthologous_to=LTnewLM_310033300.1,LmjF.31.2250_mRNA,LmjF.31.2330_mRNA;ortholog_cluster=OG0000230;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_31 Pfam protein_match 1193197 1193964 . - . Parent=LTnewLM_310034300.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_31 Pfam protein_match 1193623 1193925 . - . Parent=LTnewLM_310034300.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_31 . polypeptide 1196183 1197271 . - . ID=LTnewLM_310034400.1:pep;Derives_from=LTnewLM_310034400.1;orthologous_to=LmjF.31.2340.1_mRNA,LmjF.31.2340.2_mRNA;ortholog_cluster=OG0000536;product=term%3DHaloacid dehalogenase-like hydrolase/HAD-hyrolase-like/Mitochondrial PGP phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13344|Pfam:PF13242|Pfam:PF09419 LTnewLM_31 Pfam protein_match 1196201 1196437 . - . Parent=LTnewLM_310034400.1:pep;Name=PF13242;signature_desc=HAD-hyrolase-like LTnewLM_31 Pfam protein_match 1196279 1196401 . - . Parent=LTnewLM_310034400.1:pep;Name=PF09419;signature_desc=Mitochondrial PGP phosphatase LTnewLM_31 Pfam protein_match 1196888 1197211 . - . Parent=LTnewLM_310034400.1:pep;Name=PF13344;signature_desc=Haloacid dehalogenase-like hydrolase ### LTnewLM_31 . polypeptide 1196183 1197518 . - . ID=LTnewLM_310034400.2:pep;Derives_from=LTnewLM_310034400.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1196183 1207438 . - . ID=LTnewLM_310034400:pseudogene;coverage=0.958;sequence_ID=0.851;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2340_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1196183 1197302 . - . ID=LTnewLM_310034400.1;Parent=LTnewLM_310034400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1196183 1197271 . - . ID=LTnewLM_310034400.1:pseudogenic_exon:1;Parent=LTnewLM_310034400.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1196183 1207438 . - . ID=LTnewLM_310034400.2;Parent=LTnewLM_310034400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1196183 1197518 . - . ID=LTnewLM_310034400.2:pseudogenic_exon:1;Parent=LTnewLM_310034400.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1207971 1212464 1 - . ID=LTnewLM_310034500 LTnewLM_31 AUGUSTUS mRNA 1207971 1212464 1 - . ID=LTnewLM_310034500.1;Parent=LTnewLM_310034500 LTnewLM_31 AUGUSTUS CDS 1207971 1212464 1 - 0 ID=LTnewLM_310034500.1:CDS:1;Parent=LTnewLM_310034500.1 ### LTnewLM_31 . polypeptide 1207971 1212464 . - . ID=LTnewLM_310034500.1:pep;Derives_from=LTnewLM_310034500.1;orthologous_to=LmjF.31.2350_mRNA;ortholog_cluster=OG0004568;product=term%3DSymplekin tight junction protein C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12295 LTnewLM_31 Pfam protein_match 1208055 1208417 . - . Parent=LTnewLM_310034500.1:pep;Name=PF12295;signature_desc=Symplekin tight junction protein C terminal ### LTnewLM_31 AUGUSTUS gene 1213913 1215529 1 - . ID=LTnewLM_310034600 LTnewLM_31 AUGUSTUS mRNA 1213913 1215529 1 - . ID=LTnewLM_310034600.1;Parent=LTnewLM_310034600 LTnewLM_31 AUGUSTUS CDS 1213913 1215529 1 - 0 ID=LTnewLM_310034600.1:CDS:1;Parent=LTnewLM_310034600.1 ### LTnewLM_31 . polypeptide 1213913 1215529 . - . ID=LTnewLM_310034600.1:pep;Derives_from=LTnewLM_310034600.1;orthologous_to=LmjF.31.2360_mRNA;ortholog_cluster=OG0004569;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1216231 1217613 1 - . ID=LTnewLM_310034700 LTnewLM_31 AUGUSTUS mRNA 1216231 1217613 1 - . ID=LTnewLM_310034700.1;Parent=LTnewLM_310034700 LTnewLM_31 AUGUSTUS CDS 1216231 1217613 1 - 0 ID=LTnewLM_310034700.1:CDS:1;Parent=LTnewLM_310034700.1 ### LTnewLM_31 . polypeptide 1216231 1217613 . - . ID=LTnewLM_310034700.1:pep;Derives_from=LTnewLM_310034700.1;orthologous_to=LmjF.31.2370_mRNA;ortholog_cluster=OG0004570;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1222582 1225038 1 - . ID=LTnewLM_310034800 LTnewLM_31 AUGUSTUS mRNA 1222582 1225038 1 - . ID=LTnewLM_310034800.1;Parent=LTnewLM_310034800 LTnewLM_31 AUGUSTUS CDS 1222582 1225038 1 - 0 ID=LTnewLM_310034800.1:CDS:1;Parent=LTnewLM_310034800.1 ### LTnewLM_31 . polypeptide 1222582 1225038 . - . ID=LTnewLM_310034800.1:pep;Derives_from=LTnewLM_310034800.1;orthologous_to=LmjF.31.2380_mRNA;ortholog_cluster=OG0004571;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1229561 1230916 1 - . ID=LTnewLM_310034900 LTnewLM_31 AUGUSTUS mRNA 1229561 1230916 1 - . ID=LTnewLM_310034900.1;Parent=LTnewLM_310034900 LTnewLM_31 AUGUSTUS CDS 1229561 1230916 1 - 0 ID=LTnewLM_310034900.1:CDS:1;Parent=LTnewLM_310034900.1 ### LTnewLM_31 . polypeptide 1229561 1230916 . - . ID=LTnewLM_310034900.1:pep;Derives_from=LTnewLM_310034900.1;orthologous_to=LmjF.31.2390_mRNA;ortholog_cluster=OG0004572;product=term%3DCation efflux family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01545;Ontology_term=GO:0006812,GO:0008324,GO:0055085,GO:0016021 LTnewLM_31 Pfam protein_match 1229870 1230733 . - . Parent=LTnewLM_310034900.1:pep;Name=PF01545;signature_desc=Cation efflux family;Ontology_term=GO:0008324,GO:0006812,GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 1232930 1236610 1 - . ID=LTnewLM_310035000 LTnewLM_31 AUGUSTUS mRNA 1232930 1236610 1 - . ID=LTnewLM_310035000.1;Parent=LTnewLM_310035000 LTnewLM_31 AUGUSTUS CDS 1232930 1236610 1 - 0 ID=LTnewLM_310035000.1:CDS:1;Parent=LTnewLM_310035000.1 ### LTnewLM_31 . polypeptide 1232930 1236610 . - . ID=LTnewLM_310035000.1:pep;Derives_from=LTnewLM_310035000.1;orthologous_to=LmjF.31.2400_mRNA;ortholog_cluster=OG0004573;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1245489 1246100 . - . ID=LTnewLM_310035100.1:pep;Derives_from=LTnewLM_310035100.1;orthologous_to=LmjF.31.2410.1_mRNA;ortholog_cluster=OG0007610;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1245489 1246498 . - . ID=LTnewLM_310035100.2:pep;Derives_from=LTnewLM_310035100.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1245489 1249240 . - . ID=LTnewLM_310035100:pseudogene;coverage=0.962;sequence_ID=0.873;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2410_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1245489 1246355 . - . ID=LTnewLM_310035100.1;Parent=LTnewLM_310035100:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1245489 1246100 . - . ID=LTnewLM_310035100.1:pseudogenic_exon:1;Parent=LTnewLM_310035100.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1245489 1249240 . - . ID=LTnewLM_310035100.2;Parent=LTnewLM_310035100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1245489 1246498 . - . ID=LTnewLM_310035100.2:pseudogenic_exon:1;Parent=LTnewLM_310035100.2;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1249981 1250664 . - . ID=LTnewLM_310035200.1:pep;Derives_from=LTnewLM_310035200.1;orthologous_to=LmjF.31.2420.1_mRNA;ortholog_cluster=OG0007611;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1249981 1250771 . - . ID=LTnewLM_310035200.2:pep;Derives_from=LTnewLM_310035200.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1249981 1252902 . - . ID=LTnewLM_310035200:pseudogene;coverage=0.992;sequence_ID=0.869;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2420_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1249981 1250699 . - . ID=LTnewLM_310035200.1;Parent=LTnewLM_310035200:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1249981 1250664 . - . ID=LTnewLM_310035200.1:pseudogenic_exon:1;Parent=LTnewLM_310035200.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1249981 1252902 . - . ID=LTnewLM_310035200.2;Parent=LTnewLM_310035200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1249981 1250771 . - . ID=LTnewLM_310035200.2:pseudogenic_exon:1;Parent=LTnewLM_310035200.2;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1253130 1254102 . - . ID=LTnewLM_310035300.1:pep;Derives_from=LTnewLM_310035300.1;orthologous_to=LTnewLM_310035300.2;ortholog_cluster=OG0004574;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1253130 1254459 0.52 - . ID=LTnewLM_310035300 LTnewLM_31 AUGUSTUS mRNA 1253130 1254102 0.2 - . ID=LTnewLM_310035300.1;Parent=LTnewLM_310035300 LTnewLM_31 AUGUSTUS CDS 1253130 1253253 0.22 - 1 ID=LTnewLM_310035300.1:CDS:1;Parent=LTnewLM_310035300.1 LTnewLM_31 AUGUSTUS CDS 1253888 1254102 0.35 - 0 ID=LTnewLM_310035300.1:CDS:2;Parent=LTnewLM_310035300.1 LTnewLM_31 AUGUSTUS mRNA 1253130 1254459 0.32 - . ID=LTnewLM_310035300.2;Parent=LTnewLM_310035300 LTnewLM_31 AUGUSTUS CDS 1253130 1253253 0.35 - 1 ID=LTnewLM_310035300.2:CDS:1;Parent=LTnewLM_310035300.2 LTnewLM_31 AUGUSTUS CDS 1253888 1254459 0.56 - 0 ID=LTnewLM_310035300.2:CDS:2;Parent=LTnewLM_310035300.2 ### LTnewLM_31 . polypeptide 1253130 1254459 . - . ID=LTnewLM_310035300.2:pep;Derives_from=LTnewLM_310035300.2;orthologous_to=LTnewLM_310035300.1;ortholog_cluster=OG0004574;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1255600 1256358 1 - . ID=LTnewLM_310035400 LTnewLM_31 AUGUSTUS mRNA 1255600 1256358 1 - . ID=LTnewLM_310035400.1;Parent=LTnewLM_310035400 LTnewLM_31 AUGUSTUS CDS 1255600 1256358 1 - 0 ID=LTnewLM_310035400.1:CDS:1;Parent=LTnewLM_310035400.1 ### LTnewLM_31 . polypeptide 1255600 1256358 . - . ID=LTnewLM_310035400.1:pep;Derives_from=LTnewLM_310035400.1;orthologous_to=LmjF.31.2430_mRNA;ortholog_cluster=OG0004575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1258815 1259474 1 - . ID=LTnewLM_310035500 LTnewLM_31 AUGUSTUS mRNA 1258815 1259474 1 - . ID=LTnewLM_310035500.1;Parent=LTnewLM_310035500 LTnewLM_31 AUGUSTUS CDS 1258815 1259474 1 - 0 ID=LTnewLM_310035500.1:CDS:1;Parent=LTnewLM_310035500.1 ### LTnewLM_31 . polypeptide 1258815 1259474 . - . ID=LTnewLM_310035500.1:pep;Derives_from=LTnewLM_310035500.1;orthologous_to=LmjF.31.2440_mRNA;ortholog_cluster=OG0004576;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1260983 1261429 . - . ID=LTnewLM_310035600.1:pep;Derives_from=LTnewLM_310035600.1;orthologous_to=LmjF.31.2450.1_mRNA;ortholog_cluster=OG0007612;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1260983 1261703 . - . ID=LTnewLM_310035600.2:pep;Derives_from=LTnewLM_310035600.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1260983 1262111 . - . ID=LTnewLM_310035600:pseudogene;coverage=0.987;sequence_ID=0.879;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2450_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1260983 1261561 . - . ID=LTnewLM_310035600.1;Parent=LTnewLM_310035600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1260983 1261429 . - . ID=LTnewLM_310035600.1:pseudogenic_exon:1;Parent=LTnewLM_310035600.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1260983 1262111 . - . ID=LTnewLM_310035600.2;Parent=LTnewLM_310035600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1260983 1261703 . - . ID=LTnewLM_310035600.2:pseudogenic_exon:1;Parent=LTnewLM_310035600.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1262602 1263699 1 - . ID=LTnewLM_310035700 LTnewLM_31 AUGUSTUS mRNA 1262602 1263699 1 - . ID=LTnewLM_310035700.1;Parent=LTnewLM_310035700 LTnewLM_31 AUGUSTUS CDS 1262602 1263699 1 - 0 ID=LTnewLM_310035700.1:CDS:1;Parent=LTnewLM_310035700.1 ### LTnewLM_31 . polypeptide 1262602 1263699 . - . ID=LTnewLM_310035700.1:pep;Derives_from=LTnewLM_310035700.1;orthologous_to=LmjF.31.2460_mRNA;ortholog_cluster=OG0004577;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_31 Pfam protein_match 1262896 1263369 . - . Parent=LTnewLM_310035700.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_31 AUGUSTUS gene 1266030 1267520 1 - . ID=LTnewLM_310035800 LTnewLM_31 AUGUSTUS mRNA 1266030 1267520 1 - . ID=LTnewLM_310035800.1;Parent=LTnewLM_310035800 LTnewLM_31 AUGUSTUS CDS 1266030 1267520 1 - 0 ID=LTnewLM_310035800.1:CDS:1;Parent=LTnewLM_310035800.1 ### LTnewLM_31 . polypeptide 1266030 1267520 . - . ID=LTnewLM_310035800.1:pep;Derives_from=LTnewLM_310035800.1;orthologous_to=LTnewLM_310036800.1,LmjF.31.2570_mRNA;ortholog_cluster=OG0000439;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1268581 1269496 . - . ID=LTnewLM_310035900:pseudogene;coverage=0.997;sequence_ID=0.906;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2470_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1268581 1269496 . - . ID=LTnewLM_310035900.1;Parent=LTnewLM_310035900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1268581 1269496 . - . ID=LTnewLM_310035900.1:pseudogenic_exon:1;Parent=LTnewLM_310035900.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1268581 1269496 . - . ID=LTnewLM_310035900.1:pep;Derives_from=LTnewLM_310035900.1;orthologous_to=LmjF.31.2470_mRNA;ortholog_cluster=OG0007613;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1269680 1270162 1 - . ID=LTnewLM_310036000 LTnewLM_31 AUGUSTUS mRNA 1269680 1270162 1 - . ID=LTnewLM_310036000.1;Parent=LTnewLM_310036000 LTnewLM_31 AUGUSTUS CDS 1269680 1270162 1 - 0 ID=LTnewLM_310036000.1:CDS:1;Parent=LTnewLM_310036000.1 ### LTnewLM_31 . polypeptide 1269680 1270162 . - . ID=LTnewLM_310036000.1:pep;Derives_from=LTnewLM_310036000.1;orthologous_to=LmjF.31.2480_mRNA;ortholog_cluster=OG0004578;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111;Ontology_term=GO:0051536,GO:0009055 LTnewLM_31 Pfam protein_match 1269749 1269991 . - . Parent=LTnewLM_310036000.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_31 AUGUSTUS gene 1270853 1271290 1 - . ID=LTnewLM_310036100 LTnewLM_31 AUGUSTUS mRNA 1270853 1271290 1 - . ID=LTnewLM_310036100.1;Parent=LTnewLM_310036100 LTnewLM_31 AUGUSTUS CDS 1270853 1271290 1 - 0 ID=LTnewLM_310036100.1:CDS:1;Parent=LTnewLM_310036100.1 ### LTnewLM_31 . polypeptide 1270853 1271290 . - . ID=LTnewLM_310036100.1:pep;Derives_from=LTnewLM_310036100.1;orthologous_to=LmjF.31.2490_mRNA;ortholog_cluster=OG0004579;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111;Ontology_term=GO:0051536,GO:0009055 LTnewLM_31 Pfam protein_match 1270919 1271161 . - . Parent=LTnewLM_310036100.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_31 AUGUSTUS gene 1272070 1272495 1 - . ID=LTnewLM_310036200 LTnewLM_31 AUGUSTUS mRNA 1272070 1272495 1 - . ID=LTnewLM_310036200.1;Parent=LTnewLM_310036200 LTnewLM_31 AUGUSTUS CDS 1272070 1272495 1 - 0 ID=LTnewLM_310036200.1:CDS:1;Parent=LTnewLM_310036200.1 ### LTnewLM_31 . polypeptide 1272070 1272495 . - . ID=LTnewLM_310036200.1:pep;Derives_from=LTnewLM_310036200.1;orthologous_to=LmjF.31.2500_mRNA;ortholog_cluster=OG0004580;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111;Ontology_term=GO:0051536,GO:0009055 LTnewLM_31 Pfam protein_match 1272139 1272372 . - . Parent=LTnewLM_310036200.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_31 AUGUSTUS gene 1273348 1273896 1 - . ID=LTnewLM_310036300 LTnewLM_31 AUGUSTUS mRNA 1273348 1273896 1 - . ID=LTnewLM_310036300.1;Parent=LTnewLM_310036300 LTnewLM_31 AUGUSTUS CDS 1273348 1273896 1 - 0 ID=LTnewLM_310036300.1:CDS:1;Parent=LTnewLM_310036300.1 ### LTnewLM_31 . polypeptide 1273348 1273896 . - . ID=LTnewLM_310036300.1:pep;Derives_from=LTnewLM_310036300.1;orthologous_to=LmjF.31.2510_mRNA;ortholog_cluster=OG0004581;product=term%3D2Fe-2S iron-sulfur cluster binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00111;Ontology_term=GO:0051536,GO:0009055 LTnewLM_31 Pfam protein_match 1273447 1273686 . - . Parent=LTnewLM_310036300.1:pep;Name=PF00111;signature_desc=2Fe-2S iron-sulfur cluster binding domain;Ontology_term=GO:0009055,GO:0051536 ### LTnewLM_31 . pseudogene 1275735 1278263 . - . ID=LTnewLM_310036400:pseudogene;coverage=0.972;sequence_ID=0.860;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2520_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1275735 1278263 . - . ID=LTnewLM_310036400.1;Parent=LTnewLM_310036400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1275735 1278263 . - . ID=LTnewLM_310036400.1:pseudogenic_exon:1;Parent=LTnewLM_310036400.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1275735 1278263 . - . ID=LTnewLM_310036400.1:pep;Derives_from=LTnewLM_310036400.1;orthologous_to=LTnewLM_310036500.1,LmjF.31.2520_mRNA,LmjF.31.2530_mRNA,LmjF.31.2540_mRNA;ortholog_cluster=OG0000096;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1279889 1282369 1 - . ID=LTnewLM_310036500 LTnewLM_31 AUGUSTUS mRNA 1279889 1282369 1 - . ID=LTnewLM_310036500.1;Parent=LTnewLM_310036500 LTnewLM_31 AUGUSTUS CDS 1279889 1282369 1 - 0 ID=LTnewLM_310036500.1:CDS:1;Parent=LTnewLM_310036500.1 ### LTnewLM_31 . polypeptide 1279889 1282369 . - . ID=LTnewLM_310036500.1:pep;Derives_from=LTnewLM_310036500.1;orthologous_to=LTnewLM_310036400.1,LmjF.31.2520_mRNA,LmjF.31.2530_mRNA,LmjF.31.2540_mRNA;ortholog_cluster=OG0000096;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1283662 1286028 1 - . ID=LTnewLM_310036600 LTnewLM_31 AUGUSTUS mRNA 1283662 1286028 1 - . ID=LTnewLM_310036600.1;Parent=LTnewLM_310036600 LTnewLM_31 AUGUSTUS CDS 1283662 1286028 1 - 0 ID=LTnewLM_310036600.1:CDS:1;Parent=LTnewLM_310036600.1 ### LTnewLM_31 . polypeptide 1283662 1286028 . - . ID=LTnewLM_310036600.1:pep;Derives_from=LTnewLM_310036600.1;orthologous_to=LmjF.31.2550_mRNA;ortholog_cluster=OG0004582;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1288106 1290757 . - . ID=LTnewLM_310036700.1:pep;Derives_from=LTnewLM_310036700.1;orthologous_to=LmjF.31.2560.1_mRNA,LmjF.31.2560.2_mRNA;ortholog_cluster=OG0000537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1288106 1291185 . - . ID=LTnewLM_310036700.2:pep;Derives_from=LTnewLM_310036700.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1288106 1292160 . - . ID=LTnewLM_310036700:pseudogene;coverage=0.992;sequence_ID=0.905;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2560_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1288106 1291186 . - . ID=LTnewLM_310036700.1;Parent=LTnewLM_310036700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1288106 1290757 . - . ID=LTnewLM_310036700.1:pseudogenic_exon:1;Parent=LTnewLM_310036700.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1288106 1292160 . - . ID=LTnewLM_310036700.2;Parent=LTnewLM_310036700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1288106 1291185 . - . ID=LTnewLM_310036700.2:pseudogenic_exon:1;Parent=LTnewLM_310036700.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1293056 1296382 1 - . ID=LTnewLM_310036800 LTnewLM_31 AUGUSTUS mRNA 1293056 1296382 1 - . ID=LTnewLM_310036800.1;Parent=LTnewLM_310036800 LTnewLM_31 AUGUSTUS CDS 1293056 1296382 1 - 0 ID=LTnewLM_310036800.1:CDS:1;Parent=LTnewLM_310036800.1 ### LTnewLM_31 . polypeptide 1293056 1296382 . - . ID=LTnewLM_310036800.1:pep;Derives_from=LTnewLM_310036800.1;orthologous_to=LTnewLM_310035800.1,LmjF.31.2570_mRNA;ortholog_cluster=OG0000439;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1298599 1298811 1 - . ID=LTnewLM_310036900 LTnewLM_31 AUGUSTUS mRNA 1298599 1298811 1 - . ID=LTnewLM_310036900.1;Parent=LTnewLM_310036900 LTnewLM_31 AUGUSTUS CDS 1298599 1298811 1 - 0 ID=LTnewLM_310036900.1:CDS:1;Parent=LTnewLM_310036900.1 ### LTnewLM_31 . polypeptide 1298599 1298811 . - . ID=LTnewLM_310036900.1:pep;Derives_from=LTnewLM_310036900.1;orthologous_to=LmjF.31.2580_mRNA;ortholog_cluster=OG0004583;product=term%3DUbiquinol-cytochrome C reductase hinge protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02320 LTnewLM_31 Pfam protein_match 1298605 1298793 . - . Parent=LTnewLM_310036900.1:pep;Name=PF02320;signature_desc=Ubiquinol-cytochrome C reductase hinge protein ### LTnewLM_31 AUGUSTUS gene 1299923 1302697 1 - . ID=LTnewLM_310037000 LTnewLM_31 AUGUSTUS mRNA 1299923 1302697 1 - . ID=LTnewLM_310037000.1;Parent=LTnewLM_310037000 LTnewLM_31 AUGUSTUS CDS 1299923 1302697 1 - 0 ID=LTnewLM_310037000.1:CDS:1;Parent=LTnewLM_310037000.1 ### LTnewLM_31 . polypeptide 1299923 1302697 . - . ID=LTnewLM_310037000.1:pep;Derives_from=LTnewLM_310037000.1;orthologous_to=LmjF.31.2590_mRNA;ortholog_cluster=OG0004584;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1304365 1305567 1 - . ID=LTnewLM_310037100 LTnewLM_31 AUGUSTUS mRNA 1304365 1305567 1 - . ID=LTnewLM_310037100.1;Parent=LTnewLM_310037100 LTnewLM_31 AUGUSTUS CDS 1304365 1305567 1 - 0 ID=LTnewLM_310037100.1:CDS:1;Parent=LTnewLM_310037100.1 ### LTnewLM_31 . polypeptide 1304365 1305567 . - . ID=LTnewLM_310037100.1:pep;Derives_from=LTnewLM_310037100.1;orthologous_to=LmjF.31.2600_mRNA;ortholog_cluster=OG0004585;product=term%3DCalreticulin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00262;Ontology_term=GO:0005783,GO:0005509,GO:0051082,GO:0006457 LTnewLM_31 Pfam protein_match 1304572 1304793 . - . Parent=LTnewLM_310037100.1:pep;Name=PF00262;signature_desc=Calreticulin family;Ontology_term=GO:0005509,GO:0051082,GO:0006457,GO:0005783 LTnewLM_31 Pfam protein_match 1304797 1305477 . - . Parent=LTnewLM_310037100.1:pep;Name=PF00262;signature_desc=Calreticulin family;Ontology_term=GO:0005509,GO:0051082,GO:0006457,GO:0005783 ### LTnewLM_31 AUGUSTUS gene 1306632 1311620 1 - . ID=LTnewLM_310037200 LTnewLM_31 AUGUSTUS mRNA 1306632 1311620 1 - . ID=LTnewLM_310037200.1;Parent=LTnewLM_310037200 LTnewLM_31 AUGUSTUS CDS 1306632 1311620 1 - 0 ID=LTnewLM_310037200.1:CDS:1;Parent=LTnewLM_310037200.1 ### LTnewLM_31 . polypeptide 1306632 1311620 . - . ID=LTnewLM_310037200.1:pep;Derives_from=LTnewLM_310037200.1;orthologous_to=LmjF.31.2610_mRNA;ortholog_cluster=OG0004586;product=term%3DRNA polymerase Rpb1%2C domain 1/RNA polymerase Rpb1%2C domain 2/RNA polymerase Rpb1%2C domain 3/RNA polymerase Rpb1%2C domain 4/RNA polymerase Rpb1%2C domain 5/RNA polymerase Rpb1%2C domain 6/RNA polymerase Rpb1%2C domain 7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04997|Pfam:PF00623|Pfam:PF04983|Pfam:PF05000|Pfam:PF04998|Pfam:PF04992|Pfam:PF04990;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_31 Pfam protein_match 1307442 1309265 . - . Parent=LTnewLM_310037200.1:pep;Name=PF04998;signature_desc=RNA polymerase Rpb1%2C domain 5;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1307829 1308212 . - . Parent=LTnewLM_310037200.1:pep;Name=PF04990;signature_desc=RNA polymerase Rpb1%2C domain 7;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1308465 1309067 . - . Parent=LTnewLM_310037200.1:pep;Name=PF04992;signature_desc=RNA polymerase Rpb1%2C domain 6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1309290 1309598 . - . Parent=LTnewLM_310037200.1:pep;Name=PF05000;signature_desc=RNA polymerase Rpb1%2C domain 4;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1309680 1310147 . - . Parent=LTnewLM_310037200.1:pep;Name=PF04983;signature_desc=RNA polymerase Rpb1%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1310157 1310645 . - . Parent=LTnewLM_310037200.1:pep;Name=PF00623;signature_desc=RNA polymerase Rpb1%2C domain 2;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_31 Pfam protein_match 1310652 1311578 . - . Parent=LTnewLM_310037200.1:pep;Name=PF04997;signature_desc=RNA polymerase Rpb1%2C domain 1;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_31 AUGUSTUS gene 1312504 1313682 1 - . ID=LTnewLM_310037300 LTnewLM_31 AUGUSTUS mRNA 1312504 1313682 1 - . ID=LTnewLM_310037300.1;Parent=LTnewLM_310037300 LTnewLM_31 AUGUSTUS CDS 1312504 1313682 1 - 0 ID=LTnewLM_310037300.1:CDS:1;Parent=LTnewLM_310037300.1 ### LTnewLM_31 . polypeptide 1312504 1313682 . - . ID=LTnewLM_310037300.1:pep;Derives_from=LTnewLM_310037300.1;orthologous_to=LmjF.31.2620_mRNA;ortholog_cluster=OG0004587;product=term%3DCrcB-like protein%2C Camphor Resistance (CrcB)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02537;Ontology_term=GO:0016021 LTnewLM_31 Pfam protein_match 1312543 1312866 . - . Parent=LTnewLM_310037300.1:pep;Name=PF02537;signature_desc=CrcB-like protein%2C Camphor Resistance (CrcB);Ontology_term=GO:0016021 LTnewLM_31 Pfam protein_match 1313149 1313394 . - . Parent=LTnewLM_310037300.1:pep;Name=PF02537;signature_desc=CrcB-like protein%2C Camphor Resistance (CrcB);Ontology_term=GO:0016021 ### LTnewLM_31 AUGUSTUS gene 1315584 1316681 1 - . ID=LTnewLM_310037400 LTnewLM_31 AUGUSTUS mRNA 1315584 1316681 1 - . ID=LTnewLM_310037400.1;Parent=LTnewLM_310037400 LTnewLM_31 AUGUSTUS CDS 1315584 1316681 1 - 0 ID=LTnewLM_310037400.1:CDS:1;Parent=LTnewLM_310037400.1 ### LTnewLM_31 . polypeptide 1315584 1316681 . - . ID=LTnewLM_310037400.1:pep;Derives_from=LTnewLM_310037400.1;orthologous_to=LmjF.31.2630_mRNA;ortholog_cluster=OG0004588;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_31 Pfam protein_match 1315761 1316333 . - . Parent=LTnewLM_310037400.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 LTnewLM_31 Pfam protein_match 1316343 1316420 . - . Parent=LTnewLM_310037400.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain ### LTnewLM_31 . pseudogene 1317574 1319079 858 - . ID=LTnewLM_310037500:pseudogene;has_internal_stop=true;has_frameshift=false;Target=LmjF.31.2650:mRNA 26 541;original_prot_length=558 LTnewLM_31 . pseudogenic_transcript 1317574 1319079 . - . ID=LTnewLM_310037500.1;Parent=LTnewLM_310037500:pseudogene LTnewLM_31 . pseudogenic_exon 1317574 1319079 . - . ID=LTnewLM_310037500.1:pseudogenic_exon:1;Parent=LTnewLM_310037500.1 ### LTnewLM_31 . polypeptide 1317574 1319079 . - . ID=LTnewLM_310037500.1:pep;Derives_from=LTnewLM_310037500.1;orthologous_to=LmjF.31.2640.1_mRNA,LmjF.31.2640.2_mRNA;ortholog_cluster=OG0000538;product=term%3DFAD dependent oxidoreductase/Pyridine nucleotide-disulphide oxidoreductase/Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12831|Pfam:PF07992|Pfam:PF00070|Pfam:PF02852;Ontology_term=GO:0055114,GO:0016491,GO:0050660,GO:0045454 LTnewLM_31 Pfam protein_match 1317712 1318005 . - . Parent=LTnewLM_310037500.1:pep;Name=PF02852;signature_desc=Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain;Ontology_term=GO:0045454,GO:0055114 LTnewLM_31 Pfam protein_match 1318087 1319079 . - . Parent=LTnewLM_310037500.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_31 Pfam protein_match 1318348 1318551 . - . Parent=LTnewLM_310037500.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 LTnewLM_31 Pfam protein_match 1318870 1319079 . - . Parent=LTnewLM_310037500.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase ### LTnewLM_31 . pseudogene 1321018 1322691 . - . ID=LTnewLM_310037600:pseudogene;coverage=1.0;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2650_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1321018 1322691 . - . ID=LTnewLM_310037600.1;Parent=LTnewLM_310037600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1321018 1322691 . - . ID=LTnewLM_310037600.1:pseudogenic_exon:1;Parent=LTnewLM_310037600.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1321018 1322691 . - . ID=LTnewLM_310037600.1:pep;Derives_from=LTnewLM_310037600.1;orthologous_to=LmjF.31.2650_mRNA;ortholog_cluster=OG0007614;product=term%3DHI0933-like protein/Pyridine nucleotide-disulphide oxidoreductase/FAD binding domain/FAD dependent oxidoreductase/Glucose inhibited division protein A/Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03486|Pfam:PF07992|Pfam:PF00890|Pfam:PF12831|Pfam:PF01134|Pfam:PF00070|Pfam:PF02852;Ontology_term=GO:0016491,GO:0008033,GO:0045454,GO:0050660,GO:0055114 LTnewLM_31 Pfam protein_match 1321192 1321512 . - . Parent=LTnewLM_310037600.1:pep;Name=PF02852;signature_desc=Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain;Ontology_term=GO:0045454,GO:0055114 LTnewLM_31 Pfam protein_match 1321582 1322619 . - . Parent=LTnewLM_310037600.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_31 Pfam protein_match 1321906 1322094 . - . Parent=LTnewLM_310037600.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 LTnewLM_31 Pfam protein_match 1322173 1322616 . - . Parent=LTnewLM_310037600.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_31 Pfam protein_match 1322185 1322616 . - . Parent=LTnewLM_310037600.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_31 Pfam protein_match 1322524 1322616 . - . Parent=LTnewLM_310037600.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_31 Pfam protein_match 1322524 1322619 . - . Parent=LTnewLM_310037600.1:pep;Name=PF03486;signature_desc=HI0933-like protein ### LTnewLM_31 AUGUSTUS gene 1327249 1328982 1 - . ID=LTnewLM_310037700 LTnewLM_31 AUGUSTUS mRNA 1327249 1328982 1 - . ID=LTnewLM_310037700.1;Parent=LTnewLM_310037700 LTnewLM_31 AUGUSTUS CDS 1327249 1328982 1 - 0 ID=LTnewLM_310037700.1:CDS:1;Parent=LTnewLM_310037700.1 ### LTnewLM_31 . polypeptide 1327249 1328982 . - . ID=LTnewLM_310037700.1:pep;Derives_from=LTnewLM_310037700.1;orthologous_to=LmjF.31.2655_mRNA;ortholog_cluster=OG0004589;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1331659 1332174 1 - . ID=LTnewLM_310037800 LTnewLM_31 AUGUSTUS mRNA 1331659 1332174 1 - . ID=LTnewLM_310037800.1;Parent=LTnewLM_310037800 LTnewLM_31 AUGUSTUS CDS 1331659 1332174 1 - 0 ID=LTnewLM_310037800.1:CDS:1;Parent=LTnewLM_310037800.1 ### LTnewLM_31 . polypeptide 1331659 1332174 . - . ID=LTnewLM_310037800.1:pep;Derives_from=LTnewLM_310037800.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1332511 1332756 1 - . ID=LTnewLM_310037900 LTnewLM_31 AUGUSTUS mRNA 1332511 1332756 1 - . ID=LTnewLM_310037900.1;Parent=LTnewLM_310037900 LTnewLM_31 AUGUSTUS CDS 1332511 1332756 1 - 0 ID=LTnewLM_310037900.1:CDS:1;Parent=LTnewLM_310037900.1 ### LTnewLM_31 . polypeptide 1332511 1332756 . - . ID=LTnewLM_310037900.1:pep;Derives_from=LTnewLM_310037900.1;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1335413 1337869 . - . ID=LTnewLM_310038000:pseudogene;coverage=0.971;sequence_ID=0.909;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2670_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1335413 1337869 . - . ID=LTnewLM_310038000.1;Parent=LTnewLM_310038000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1335413 1337869 . - . ID=LTnewLM_310038000.1:pseudogenic_exon:1;Parent=LTnewLM_310038000.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1335413 1337869 . - . ID=LTnewLM_310038000.1:pep;Derives_from=LTnewLM_310038000.1;orthologous_to=LmjF.31.2670_mRNA;ortholog_cluster=OG0007615;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1338150 1338807 0.43 - . ID=LTnewLM_310038100 LTnewLM_31 AUGUSTUS mRNA 1338150 1338807 0.43 - . ID=LTnewLM_310038100.1;Parent=LTnewLM_310038100 LTnewLM_31 AUGUSTUS CDS 1338150 1338153 0.46 - 1 ID=LTnewLM_310038100.1:CDS:1;Parent=LTnewLM_310038100.1 LTnewLM_31 AUGUSTUS CDS 1338248 1338807 0.43 - 0 ID=LTnewLM_310038100.1:CDS:2;Parent=LTnewLM_310038100.1 ### LTnewLM_31 . polypeptide 1338150 1338807 . - . ID=LTnewLM_310038100.1:pep;Derives_from=LTnewLM_310038100.1;orthologous_to=LTnewLM_310019300.1,LmjF.31.1160_mRNA;ortholog_cluster=OG0000438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1338843 1340281 0.63 - . ID=LTnewLM_310038200 LTnewLM_31 AUGUSTUS mRNA 1338843 1340281 0.63 - . ID=LTnewLM_310038200.1;Parent=LTnewLM_310038200 LTnewLM_31 AUGUSTUS CDS 1338843 1339508 0.91 - 0 ID=LTnewLM_310038200.1:CDS:1;Parent=LTnewLM_310038200.1 LTnewLM_31 AUGUSTUS CDS 1339577 1340281 0.63 - 0 ID=LTnewLM_310038200.1:CDS:2;Parent=LTnewLM_310038200.1 ### LTnewLM_31 . polypeptide 1338843 1340281 . - . ID=LTnewLM_310038200.1:pep;Derives_from=LTnewLM_310038200.1;orthologous_to=LmjF.31.2680_mRNA;ortholog_cluster=OG0004590;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1340325 1340612 0.76 - . ID=LTnewLM_310038300 LTnewLM_31 AUGUSTUS mRNA 1340325 1340612 0.76 - . ID=LTnewLM_310038300.1;Parent=LTnewLM_310038300 LTnewLM_31 AUGUSTUS CDS 1340325 1340423 0.81 - 0 ID=LTnewLM_310038300.1:CDS:1;Parent=LTnewLM_310038300.1 LTnewLM_31 AUGUSTUS CDS 1340469 1340612 0.83 - 0 ID=LTnewLM_310038300.1:CDS:2;Parent=LTnewLM_310038300.1 ### LTnewLM_31 . polypeptide 1340325 1340612 . - . ID=LTnewLM_310038300.1:pep;Derives_from=LTnewLM_310038300.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1342794 1346744 1 - . ID=LTnewLM_310038400 LTnewLM_31 AUGUSTUS mRNA 1342794 1346744 1 - . ID=LTnewLM_310038400.1;Parent=LTnewLM_310038400 LTnewLM_31 AUGUSTUS CDS 1342794 1346744 1 - 0 ID=LTnewLM_310038400.1:CDS:1;Parent=LTnewLM_310038400.1 ### LTnewLM_31 . polypeptide 1342794 1346744 . - . ID=LTnewLM_310038400.1:pep;Derives_from=LTnewLM_310038400.1;orthologous_to=LmjF.31.2690_mRNA;ortholog_cluster=OG0004591;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1347341 1350016 1 - . ID=LTnewLM_310038500 LTnewLM_31 AUGUSTUS mRNA 1347341 1350016 1 - . ID=LTnewLM_310038500.1;Parent=LTnewLM_310038500 LTnewLM_31 AUGUSTUS CDS 1347341 1350016 1 - 0 ID=LTnewLM_310038500.1:CDS:1;Parent=LTnewLM_310038500.1 ### LTnewLM_31 . polypeptide 1347341 1350016 . - . ID=LTnewLM_310038500.1:pep;Derives_from=LTnewLM_310038500.1;orthologous_to=LmjF.31.2700_mRNA;ortholog_cluster=OG0004592;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1351040 1354294 1 - . ID=LTnewLM_310038600 LTnewLM_31 AUGUSTUS mRNA 1351040 1354294 1 - . ID=LTnewLM_310038600.1;Parent=LTnewLM_310038600 LTnewLM_31 AUGUSTUS CDS 1351040 1354294 1 - 0 ID=LTnewLM_310038600.1:CDS:1;Parent=LTnewLM_310038600.1 ### LTnewLM_31 . polypeptide 1351040 1354294 . - . ID=LTnewLM_310038600.1:pep;Derives_from=LTnewLM_310038600.1;orthologous_to=LmjF.31.2710_mRNA;ortholog_cluster=OG0004593;product=term%3DMORN repeat/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_31 Pfam protein_match 1351199 1351975 . - . Parent=LTnewLM_310038600.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_31 Pfam protein_match 1353656 1353700 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1353716 1353769 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1353776 1353838 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1353854 1353910 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1353917 1353979 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1353986 1354048 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_31 Pfam protein_match 1354067 1354120 . - . Parent=LTnewLM_310038600.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_31 AUGUSTUS gene 1354643 1355083 1 - . ID=LTnewLM_310038700 LTnewLM_31 AUGUSTUS mRNA 1354643 1355083 1 - . ID=LTnewLM_310038700.1;Parent=LTnewLM_310038700 LTnewLM_31 AUGUSTUS CDS 1354643 1355083 1 - 0 ID=LTnewLM_310038700.1:CDS:1;Parent=LTnewLM_310038700.1 ### LTnewLM_31 . polypeptide 1354643 1355083 . - . ID=LTnewLM_310038700.1:pep;Derives_from=LTnewLM_310038700.1;orthologous_to=LmjF.31.2715_mRNA;ortholog_cluster=OG0004594;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Aragorn_1.2.36 gene 1355542 1355614 . + . ID=LTnewLM_310038800 LTnewLM_31 Aragorn_1.2.36 tRNA 1355542 1355614 . + . ID=LTnewLM_310038800:tRNA;Parent=LTnewLM_310038800;aa=Phe;anticodon=gaa;gc_content=61.6 ### LTnewLM_31 Aragorn_1.2.36 gene 1355649 1355730 . - . ID=LTnewLM_310038900 LTnewLM_31 Aragorn_1.2.36 tRNA 1355649 1355730 . - . ID=LTnewLM_310038900:tRNA;Parent=LTnewLM_310038900;aa=Ser;anticodon=aga;gc_content=56.1 ### LTnewLM_31 AUGUSTUS gene 1356080 1357687 1 - . ID=LTnewLM_310039000 LTnewLM_31 AUGUSTUS mRNA 1356080 1357687 1 - . ID=LTnewLM_310039000.1;Parent=LTnewLM_310039000 LTnewLM_31 AUGUSTUS CDS 1356080 1357687 1 - 0 ID=LTnewLM_310039000.1:CDS:1;Parent=LTnewLM_310039000.1 ### LTnewLM_31 . polypeptide 1356080 1357687 . - . ID=LTnewLM_310039000.1:pep;Derives_from=LTnewLM_310039000.1;orthologous_to=LmjF.31.2720_mRNA;ortholog_cluster=OG0004595;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415 LTnewLM_31 Pfam protein_match 1356797 1356949 . - . Parent=LTnewLM_310039000.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_31 AUGUSTUS gene 1358219 1359010 1 - . ID=LTnewLM_310039100 LTnewLM_31 AUGUSTUS mRNA 1358219 1359010 1 - . ID=LTnewLM_310039100.1;Parent=LTnewLM_310039100 LTnewLM_31 AUGUSTUS CDS 1358219 1359010 1 - 0 ID=LTnewLM_310039100.1:CDS:1;Parent=LTnewLM_310039100.1 ### LTnewLM_31 . polypeptide 1358219 1359010 . - . ID=LTnewLM_310039100.1:pep;Derives_from=LTnewLM_310039100.1;orthologous_to=LmjF.31.2730_mRNA;ortholog_cluster=OG0004596;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_31 Pfam protein_match 1358267 1358890 . - . Parent=LTnewLM_310039100.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 1359659 1361062 1 - . ID=LTnewLM_310039200 LTnewLM_31 AUGUSTUS mRNA 1359659 1361062 1 - . ID=LTnewLM_310039200.1;Parent=LTnewLM_310039200 LTnewLM_31 AUGUSTUS CDS 1359659 1361062 1 - 0 ID=LTnewLM_310039200.1:CDS:1;Parent=LTnewLM_310039200.1 ### LTnewLM_31 . polypeptide 1359659 1361062 . - . ID=LTnewLM_310039200.1:pep;Derives_from=LTnewLM_310039200.1;orthologous_to=LmjF.31.2740_mRNA;ortholog_cluster=OG0004597;product=term%3DEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)/Endoplasmic reticulum vesicle transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13850|Pfam:PF07970 LTnewLM_31 Pfam protein_match 1359722 1360441 . - . Parent=LTnewLM_310039200.1:pep;Name=PF07970;signature_desc=Endoplasmic reticulum vesicle transporter LTnewLM_31 Pfam protein_match 1360601 1360870 . - . Parent=LTnewLM_310039200.1:pep;Name=PF13850;signature_desc=Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) ### LTnewLM_31 AUGUSTUS gene 1361639 1362943 1 - . ID=LTnewLM_310039300 LTnewLM_31 AUGUSTUS mRNA 1361639 1362943 1 - . ID=LTnewLM_310039300.1;Parent=LTnewLM_310039300 LTnewLM_31 AUGUSTUS CDS 1361639 1362943 1 - 0 ID=LTnewLM_310039300.1:CDS:1;Parent=LTnewLM_310039300.1 ### LTnewLM_31 . polypeptide 1361639 1362943 . - . ID=LTnewLM_310039300.1:pep;Derives_from=LTnewLM_310039300.1;orthologous_to=LmjF.31.2750_mRNA;ortholog_cluster=OG0004598;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1364473 1368399 1 - . ID=LTnewLM_310039400 LTnewLM_31 AUGUSTUS mRNA 1364473 1368399 1 - . ID=LTnewLM_310039400.1;Parent=LTnewLM_310039400 LTnewLM_31 AUGUSTUS CDS 1364473 1368399 1 - 0 ID=LTnewLM_310039400.1:CDS:1;Parent=LTnewLM_310039400.1 ### LTnewLM_31 . polypeptide 1364473 1368399 . - . ID=LTnewLM_310039400.1:pep;Derives_from=LTnewLM_310039400.1;orthologous_to=LmjF.31.2760_mRNA;ortholog_cluster=OG0004599;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1372173 1373114 1 - . ID=LTnewLM_310039500 LTnewLM_31 AUGUSTUS mRNA 1372173 1373114 1 - . ID=LTnewLM_310039500.1;Parent=LTnewLM_310039500 LTnewLM_31 AUGUSTUS CDS 1372173 1373114 1 - 0 ID=LTnewLM_310039500.1:CDS:1;Parent=LTnewLM_310039500.1 ### LTnewLM_31 . polypeptide 1372173 1373114 . - . ID=LTnewLM_310039500.1:pep;Derives_from=LTnewLM_310039500.1;orthologous_to=LmjF.31.2770_mRNA;ortholog_cluster=OG0004600;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_31 Pfam protein_match 1372863 1373060 . - . Parent=LTnewLM_310039500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_31 AUGUSTUS gene 1375603 1376103 1 - . ID=LTnewLM_310039600 LTnewLM_31 AUGUSTUS mRNA 1375603 1376103 1 - . ID=LTnewLM_310039600.1;Parent=LTnewLM_310039600 LTnewLM_31 AUGUSTUS CDS 1375603 1376103 1 - 0 ID=LTnewLM_310039600.1:CDS:1;Parent=LTnewLM_310039600.1 ### LTnewLM_31 . polypeptide 1375603 1376103 . - . ID=LTnewLM_310039600.1:pep;Derives_from=LTnewLM_310039600.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1378731 1379444 1 - . ID=LTnewLM_310039700 LTnewLM_31 AUGUSTUS mRNA 1378731 1379444 1 - . ID=LTnewLM_310039700.1;Parent=LTnewLM_310039700 LTnewLM_31 AUGUSTUS CDS 1378731 1379444 1 - 0 ID=LTnewLM_310039700.1:CDS:1;Parent=LTnewLM_310039700.1 ### LTnewLM_31 . polypeptide 1378731 1379444 . - . ID=LTnewLM_310039700.1:pep;Derives_from=LTnewLM_310039700.1;orthologous_to=LmjF.31.2780_mRNA;ortholog_cluster=OG0004601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1381560 1381772 1 - . ID=LTnewLM_310039800 LTnewLM_31 AUGUSTUS mRNA 1381560 1381772 1 - . ID=LTnewLM_310039800.1;Parent=LTnewLM_310039800 LTnewLM_31 AUGUSTUS CDS 1381560 1381772 1 - 0 ID=LTnewLM_310039800.1:CDS:1;Parent=LTnewLM_310039800.1 ### LTnewLM_31 . polypeptide 1381560 1381772 . - . ID=LTnewLM_310039800.1:pep;Derives_from=LTnewLM_310039800.1;orthologous_to=LTnewLM_290023000.1,LTnewLM_310030100.1,LmjF.29.1570_mRNA;ortholog_cluster=OG0000207;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1383962 1384498 1 - . ID=LTnewLM_310039900 LTnewLM_31 AUGUSTUS mRNA 1383962 1384498 1 - . ID=LTnewLM_310039900.1;Parent=LTnewLM_310039900 LTnewLM_31 AUGUSTUS CDS 1383962 1384498 1 - 0 ID=LTnewLM_310039900.1:CDS:1;Parent=LTnewLM_310039900.1 ### LTnewLM_31 . polypeptide 1383962 1384498 . - . ID=LTnewLM_310039900.1:pep;Derives_from=LTnewLM_310039900.1;orthologous_to=LmjF.31.2790_mRNA;ortholog_cluster=OG0004602;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_31 Pfam protein_match 1383983 1384486 . - . Parent=LTnewLM_310039900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_31 Pfam protein_match 1384052 1384456 . - . Parent=LTnewLM_310039900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_31 Pfam protein_match 1384085 1384462 . - . Parent=LTnewLM_310039900.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_31 Pfam protein_match 1384088 1384456 . - . Parent=LTnewLM_310039900.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_31 Pfam protein_match 1384127 1384456 . - . Parent=LTnewLM_310039900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_31 . pseudogene 1388807 1389620 . - . ID=LTnewLM_310040000:pseudogene;coverage=1.0;sequence_ID=0.907;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2800_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1388807 1389620 . - . ID=LTnewLM_310040000.1;Parent=LTnewLM_310040000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1388807 1389620 . - . ID=LTnewLM_310040000.1:pseudogenic_exon:1;Parent=LTnewLM_310040000.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1388807 1389620 . - . ID=LTnewLM_310040000.1:pep;Derives_from=LTnewLM_310040000.1;orthologous_to=LmjF.31.2800_mRNA;ortholog_cluster=OG0007616;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1391152 1391991 1 - . ID=LTnewLM_310040100 LTnewLM_31 AUGUSTUS mRNA 1391152 1391991 1 - . ID=LTnewLM_310040100.1;Parent=LTnewLM_310040100 LTnewLM_31 AUGUSTUS CDS 1391152 1391991 1 - 0 ID=LTnewLM_310040100.1:CDS:1;Parent=LTnewLM_310040100.1 ### LTnewLM_31 . polypeptide 1391152 1391991 . - . ID=LTnewLM_310040100.1:pep;Derives_from=LTnewLM_310040100.1;orthologous_to=LmjF.31.2810_mRNA;ortholog_cluster=OG0004603;product=term%3DKH domain/Domain of unknown function (DUF1771)/Smr domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00013|Pfam:PF08590|Pfam:PF01713;Ontology_term=GO:0003723 LTnewLM_31 Pfam protein_match 1391341 1391538 . - . Parent=LTnewLM_310040100.1:pep;Name=PF01713;signature_desc=Smr domain LTnewLM_31 Pfam protein_match 1391572 1391754 . - . Parent=LTnewLM_310040100.1:pep;Name=PF08590;signature_desc=Domain of unknown function (DUF1771) LTnewLM_31 Pfam protein_match 1391809 1391964 . - . Parent=LTnewLM_310040100.1:pep;Name=PF00013;signature_desc=KH domain;Ontology_term=GO:0003723 ### LTnewLM_31 AUGUSTUS gene 1392835 1393647 1 - . ID=LTnewLM_310040200 LTnewLM_31 AUGUSTUS mRNA 1392835 1393647 1 - . ID=LTnewLM_310040200.1;Parent=LTnewLM_310040200 LTnewLM_31 AUGUSTUS CDS 1392835 1393647 1 - 0 ID=LTnewLM_310040200.1:CDS:1;Parent=LTnewLM_310040200.1 ### LTnewLM_31 . polypeptide 1392835 1393647 . - . ID=LTnewLM_310040200.1:pep;Derives_from=LTnewLM_310040200.1;orthologous_to=LmjF.31.2820_mRNA;ortholog_cluster=OG0004604;product=term%3DMaf1 regulator%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09174;Ontology_term=GO:0016480 LTnewLM_31 Pfam protein_match 1393012 1393572 . - . Parent=LTnewLM_310040200.1:pep;Name=PF09174;signature_desc=Maf1 regulator;Ontology_term=GO:0016480 ### LTnewLM_31 Liftoff gene 1395573 1397450 . - . ID=LTnewLM_310040300;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2830_0 LTnewLM_31 Liftoff mRNA 1395573 1397450 . - . ID=LTnewLM_310040300.1;Parent=LTnewLM_310040300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1395573 1397450 . - 0 ID=LTnewLM_310040300.1:CDS:1;Parent=LTnewLM_310040300.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1395573 1397450 . - . ID=LTnewLM_310040300.1:pep;Derives_from=LTnewLM_310040300.1;orthologous_to=LmjF.31.2830_mRNA;ortholog_cluster=OG0004605;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1398485 1399613 . - . ID=LTnewLM_310040400:pseudogene;coverage=0.990;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.2840_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1398485 1399613 . - . ID=LTnewLM_310040400.1;Parent=LTnewLM_310040400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1398485 1399613 . - . ID=LTnewLM_310040400.1:pseudogenic_exon:1;Parent=LTnewLM_310040400.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1398485 1399613 . - . ID=LTnewLM_310040400.1:pep;Derives_from=LTnewLM_310040400.1;orthologous_to=LmjF.31.2840_mRNA;ortholog_cluster=OG0007617;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1399947 1400582 1 - . ID=LTnewLM_310040500 LTnewLM_31 AUGUSTUS mRNA 1399947 1400582 1 - . ID=LTnewLM_310040500.1;Parent=LTnewLM_310040500 LTnewLM_31 AUGUSTUS CDS 1399947 1400582 1 - 0 ID=LTnewLM_310040500.1:CDS:1;Parent=LTnewLM_310040500.1 ### LTnewLM_31 . polypeptide 1399947 1400582 . - . ID=LTnewLM_310040500.1:pep;Derives_from=LTnewLM_310040500.1;orthologous_to=LmjF.31.2850_mRNA;ortholog_cluster=OG0004606;product=term%3DRibosomal protein L7/L12 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00542;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_31 Pfam protein_match 1399956 1400153 . - . Parent=LTnewLM_310040500.1:pep;Name=PF00542;signature_desc=Ribosomal protein L7/L12 C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_31 AUGUSTUS gene 1401350 1403380 1 - . ID=LTnewLM_310040600 LTnewLM_31 AUGUSTUS mRNA 1401350 1403380 1 - . ID=LTnewLM_310040600.1;Parent=LTnewLM_310040600 LTnewLM_31 AUGUSTUS CDS 1401350 1403380 1 - 0 ID=LTnewLM_310040600.1:CDS:1;Parent=LTnewLM_310040600.1 ### LTnewLM_31 . polypeptide 1401350 1403380 . - . ID=LTnewLM_310040600.1:pep;Derives_from=LTnewLM_310040600.1;orthologous_to=LmjF.31.2860_mRNA;ortholog_cluster=OG0004607;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_31 Pfam protein_match 1401467 1402312 . - . Parent=LTnewLM_310040600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 1401482 1402306 . - . Parent=LTnewLM_310040600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_31 . polypeptide 1404101 1404448 . - . ID=LTnewLM_310040700.1:pep;Derives_from=LTnewLM_310040700.1;orthologous_to=LmjF.31.2870.2_mRNA;ortholog_cluster=OG0007618;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1404101 1404660 . - . ID=LTnewLM_310040700.2:pep;Derives_from=LTnewLM_310040700.2;product=term%3Dhypothetical protein ### LTnewLM_31 . pseudogene 1404101 1404733 . - . ID=LTnewLM_310040700:pseudogene;coverage=0.982;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.2870_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1404101 1404542 . - . ID=LTnewLM_310040700.1;Parent=LTnewLM_310040700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1404101 1404448 . - . ID=LTnewLM_310040700.1:pseudogenic_exon:1;Parent=LTnewLM_310040700.1;extra_copy_number=0 LTnewLM_31 . pseudogenic_transcript 1404101 1404733 . - . ID=LTnewLM_310040700.2;Parent=LTnewLM_310040700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1404101 1404660 . - . ID=LTnewLM_310040700.2:pseudogenic_exon:1;Parent=LTnewLM_310040700.2;extra_copy_number=0 ### LTnewLM_31 AUGUSTUS gene 1405280 1406140 1 - . ID=LTnewLM_310040800 LTnewLM_31 AUGUSTUS mRNA 1405280 1406140 1 - . ID=LTnewLM_310040800.1;Parent=LTnewLM_310040800 LTnewLM_31 AUGUSTUS CDS 1405280 1406140 1 - 0 ID=LTnewLM_310040800.1:CDS:1;Parent=LTnewLM_310040800.1 ### LTnewLM_31 . polypeptide 1405280 1406140 . - . ID=LTnewLM_310040800.1:pep;Derives_from=LTnewLM_310040800.1;orthologous_to=LmjF.31.2880_mRNA;ortholog_cluster=OG0004608;product=term%3DAldo/keto reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00248 LTnewLM_31 Pfam protein_match 1405328 1406089 . - . Parent=LTnewLM_310040800.1:pep;Name=PF00248;signature_desc=Aldo/keto reductase family ### LTnewLM_31 AUGUSTUS gene 1406823 1410545 1 - . ID=LTnewLM_310040900 LTnewLM_31 AUGUSTUS mRNA 1406823 1410545 1 - . ID=LTnewLM_310040900.1;Parent=LTnewLM_310040900 LTnewLM_31 AUGUSTUS CDS 1406823 1410545 1 - 0 ID=LTnewLM_310040900.1:CDS:1;Parent=LTnewLM_310040900.1 ### LTnewLM_31 . polypeptide 1406823 1410545 . - . ID=LTnewLM_310040900.1:pep;Derives_from=LTnewLM_310040900.1;orthologous_to=LmjF.31.2890_mRNA;ortholog_cluster=OG0004609;product=term%3DRegion in Clathrin and VPS%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00637;Ontology_term=GO:0006886,GO:0016192 LTnewLM_31 Pfam protein_match 1408512 1408778 . - . Parent=LTnewLM_310040900.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 ### LTnewLM_31 AUGUSTUS gene 1411008 1413207 1 - . ID=LTnewLM_310041000 LTnewLM_31 AUGUSTUS mRNA 1411008 1413207 1 - . ID=LTnewLM_310041000.1;Parent=LTnewLM_310041000 LTnewLM_31 AUGUSTUS CDS 1411008 1412352 1 - 1 ID=LTnewLM_310041000.1:CDS:1;Parent=LTnewLM_310041000.1 LTnewLM_31 AUGUSTUS CDS 1412960 1413207 1 - 0 ID=LTnewLM_310041000.1:CDS:2;Parent=LTnewLM_310041000.1 ### LTnewLM_31 . polypeptide 1411008 1413207 . - . ID=LTnewLM_310041000.1:pep;Derives_from=LTnewLM_310041000.1;orthologous_to=LmjF.31.2900_mRNA;ortholog_cluster=OG0004610;product=term%3DNucleoporin complex subunit 54%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13874 LTnewLM_31 Pfam protein_match 1411909 1412301 . - . Parent=LTnewLM_310041000.1:pep;Name=PF13874;signature_desc=Nucleoporin complex subunit 54 ### LTnewLM_31 AUGUSTUS gene 1414572 1415315 1 - . ID=LTnewLM_310041100 LTnewLM_31 AUGUSTUS mRNA 1414572 1415315 1 - . ID=LTnewLM_310041100.1;Parent=LTnewLM_310041100 LTnewLM_31 AUGUSTUS CDS 1414572 1415315 1 - 0 ID=LTnewLM_310041100.1:CDS:1;Parent=LTnewLM_310041100.1 ### LTnewLM_31 . polypeptide 1414572 1415315 . - . ID=LTnewLM_310041100.1:pep;Derives_from=LTnewLM_310041100.1;orthologous_to=LmjF.31.2910_mRNA;ortholog_cluster=OG0004611;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1417854 1419158 1 - . ID=LTnewLM_310041200 LTnewLM_31 AUGUSTUS mRNA 1417854 1419158 1 - . ID=LTnewLM_310041200.1;Parent=LTnewLM_310041200 LTnewLM_31 AUGUSTUS CDS 1417854 1419158 1 - 0 ID=LTnewLM_310041200.1:CDS:1;Parent=LTnewLM_310041200.1 ### LTnewLM_31 . polypeptide 1417854 1419158 . - . ID=LTnewLM_310041200.1:pep;Derives_from=LTnewLM_310041200.1;orthologous_to=LmjF.31.2920_mRNA;ortholog_cluster=OG0004612;product=term%3DInositol monophosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00459;Ontology_term=GO:0046854 LTnewLM_31 Pfam protein_match 1417989 1418957 . - . Parent=LTnewLM_310041200.1:pep;Name=PF00459;signature_desc=Inositol monophosphatase family;Ontology_term=GO:0046854 ### LTnewLM_31 AUGUSTUS gene 1419844 1420593 1 - . ID=LTnewLM_310041300 LTnewLM_31 AUGUSTUS mRNA 1419844 1420593 1 - . ID=LTnewLM_310041300.1;Parent=LTnewLM_310041300 LTnewLM_31 AUGUSTUS CDS 1419844 1420593 1 - 0 ID=LTnewLM_310041300.1:CDS:1;Parent=LTnewLM_310041300.1 ### LTnewLM_31 . polypeptide 1419844 1420593 . - . ID=LTnewLM_310041300.1:pep;Derives_from=LTnewLM_310041300.1;orthologous_to=LmjF.31.2930_mRNA;ortholog_cluster=OG0004613;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1424238 1425482 1 - . ID=LTnewLM_310041400 LTnewLM_31 AUGUSTUS mRNA 1424238 1425482 1 - . ID=LTnewLM_310041400.1;Parent=LTnewLM_310041400 LTnewLM_31 AUGUSTUS CDS 1424238 1425482 1 - 0 ID=LTnewLM_310041400.1:CDS:1;Parent=LTnewLM_310041400.1 ### LTnewLM_31 . polypeptide 1424238 1425482 . - . ID=LTnewLM_310041400.1:pep;Derives_from=LTnewLM_310041400.1;orthologous_to=LmjF.31.2940_mRNA;ortholog_cluster=OG0004614;product=term%3DSqualene/phytoene synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00494;Ontology_term=GO:0009058,GO:0016740 LTnewLM_31 Pfam protein_match 1424547 1425365 . - . Parent=LTnewLM_310041400.1:pep;Name=PF00494;signature_desc=Squalene/phytoene synthase;Ontology_term=GO:0016740,GO:0009058 ### LTnewLM_31 AUGUSTUS gene 1426199 1427176 1 - . ID=LTnewLM_310041500 LTnewLM_31 AUGUSTUS mRNA 1426199 1427176 1 - . ID=LTnewLM_310041500.1;Parent=LTnewLM_310041500 LTnewLM_31 AUGUSTUS CDS 1426199 1427176 1 - 0 ID=LTnewLM_310041500.1:CDS:1;Parent=LTnewLM_310041500.1 ### LTnewLM_31 . polypeptide 1426199 1427176 . - . ID=LTnewLM_310041500.1:pep;Derives_from=LTnewLM_310041500.1;orthologous_to=LmjF.31.2950_mRNA;ortholog_cluster=OG0004615;product=term%3DNADH pyrophosphatase zinc ribbon domain/NUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09297|Pfam:PF00293;Ontology_term=GO:0016787,GO:0046872 LTnewLM_31 Pfam protein_match 1426331 1426651 . - . Parent=LTnewLM_310041500.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 LTnewLM_31 Pfam protein_match 1426664 1426756 . - . Parent=LTnewLM_310041500.1:pep;Name=PF09297;signature_desc=NADH pyrophosphatase zinc ribbon domain;Ontology_term=GO:0016787,GO:0046872 ### LTnewLM_31 AUGUSTUS gene 1430349 1431674 1 - . ID=LTnewLM_310041600 LTnewLM_31 AUGUSTUS mRNA 1430349 1431674 1 - . ID=LTnewLM_310041600.1;Parent=LTnewLM_310041600 LTnewLM_31 AUGUSTUS CDS 1430349 1431674 1 - 0 ID=LTnewLM_310041600.1:CDS:1;Parent=LTnewLM_310041600.1 ### LTnewLM_31 . polypeptide 1430349 1431674 . - . ID=LTnewLM_310041600.1:pep;Derives_from=LTnewLM_310041600.1;orthologous_to=LmjF.31.2960_mRNA,LmjF.36.2290_mRNA;ortholog_cluster=OG0000440;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_31 Pfam protein_match 1430778 1431551 . - . Parent=LTnewLM_310041600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 1430790 1431542 . - . Parent=LTnewLM_310041600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_31 Pfam protein_match 1430931 1431296 . - . Parent=LTnewLM_310041600.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_31 Pfam protein_match 1431084 1431335 . - . Parent=LTnewLM_310041600.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_31 AUGUSTUS gene 1434535 1441041 1 - . ID=LTnewLM_310041700 LTnewLM_31 AUGUSTUS mRNA 1434535 1441041 1 - . ID=LTnewLM_310041700.1;Parent=LTnewLM_310041700 LTnewLM_31 AUGUSTUS CDS 1434535 1441041 1 - 0 ID=LTnewLM_310041700.1:CDS:1;Parent=LTnewLM_310041700.1 ### LTnewLM_31 . polypeptide 1434535 1441041 . - . ID=LTnewLM_310041700.1:pep;Derives_from=LTnewLM_310041700.1;orthologous_to=LmjF.31.2970_mRNA;ortholog_cluster=OG0004616;product=term%3DBiotin carboxylase%2C N-terminal domain/Carbamoyl-phosphate synthase L chain%2C ATP binding domain/Biotin carboxylase C-terminal domain/Biotin-requiring enzyme/Acetyl-CoA carboxylase%2C central region/Carboxyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00289|Pfam:PF02786|Pfam:PF02785|Pfam:PF00364|Pfam:PF08326|Pfam:PF01039;Ontology_term=GO:0003824,GO:0008152,GO:0005524,GO:0006633,GO:0003989,GO:0016874 LTnewLM_31 Pfam protein_match 1434910 1436511 . - . Parent=LTnewLM_310041700.1:pep;Name=PF01039;signature_desc=Carboxyl transferase domain;Ontology_term=GO:0016874 LTnewLM_31 Pfam protein_match 1437076 1438539 . - . Parent=LTnewLM_310041700.1:pep;Name=PF08326;signature_desc=Acetyl-CoA carboxylase%2C central region;Ontology_term=GO:0003989,GO:0005524,GO:0006633 LTnewLM_31 Pfam protein_match 1438861 1439037 . - . Parent=LTnewLM_310041700.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_31 Pfam protein_match 1439482 1439799 . - . Parent=LTnewLM_310041700.1:pep;Name=PF02785;signature_desc=Biotin carboxylase C-terminal domain;Ontology_term=GO:0016874 LTnewLM_31 Pfam protein_match 1439905 1440465 . - . Parent=LTnewLM_310041700.1:pep;Name=PF02786;signature_desc=Carbamoyl-phosphate synthase L chain%2C ATP binding domain;Ontology_term=GO:0005524 LTnewLM_31 Pfam protein_match 1440592 1440951 . - . Parent=LTnewLM_310041700.1:pep;Name=PF00289;signature_desc=Biotin carboxylase%2C N-terminal domain;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_31 AUGUSTUS gene 1441842 1444805 1 - . ID=LTnewLM_310041800 LTnewLM_31 AUGUSTUS mRNA 1441842 1444805 1 - . ID=LTnewLM_310041800.1;Parent=LTnewLM_310041800 LTnewLM_31 AUGUSTUS CDS 1441842 1444805 1 - 0 ID=LTnewLM_310041800.1:CDS:1;Parent=LTnewLM_310041800.1 ### LTnewLM_31 . polypeptide 1441842 1444805 . - . ID=LTnewLM_310041800.1:pep;Derives_from=LTnewLM_310041800.1;orthologous_to=LmjF.31.2980_mRNA;ortholog_cluster=OG0004617;product=term%3DPhosphatase 4 regulatory subunit 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04802 LTnewLM_31 Pfam protein_match 1443777 1444238 . - . Parent=LTnewLM_310041800.1:pep;Name=PF04802;signature_desc=Phosphatase 4 regulatory subunit 3 ### LTnewLM_31 AUGUSTUS gene 1446358 1452219 2 - . ID=LTnewLM_310041900 LTnewLM_31 AUGUSTUS mRNA 1446358 1452219 1 - . ID=LTnewLM_310041900.1;Parent=LTnewLM_310041900 LTnewLM_31 AUGUSTUS CDS 1446358 1452219 1 - 0 ID=LTnewLM_310041900.1:CDS:1;Parent=LTnewLM_310041900.1 LTnewLM_31 AUGUSTUS mRNA 1450409 1452219 1 - . ID=LTnewLM_310041900.2;Parent=LTnewLM_310041900 LTnewLM_31 AUGUSTUS CDS 1450409 1450411 1 - 0 ID=LTnewLM_310041900.2:CDS:1;Parent=LTnewLM_310041900.2 LTnewLM_31 AUGUSTUS CDS 1450483 1452219 1 - 0 ID=LTnewLM_310041900.2:CDS:2;Parent=LTnewLM_310041900.2 ### LTnewLM_31 . polypeptide 1446358 1452219 . - . ID=LTnewLM_310041900.1:pep;Derives_from=LTnewLM_310041900.1;orthologous_to=LTnewLM_310041900.2,LmjF.31.2990_mRNA;ortholog_cluster=OG0000441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . polypeptide 1450409 1452219 . - . ID=LTnewLM_310041900.2:pep;Derives_from=LTnewLM_310041900.2;orthologous_to=LTnewLM_310041900.1,LmjF.31.2990_mRNA;ortholog_cluster=OG0000441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 . pseudogene 1453480 1456308 . - . ID=LTnewLM_310042000:pseudogene;coverage=1.0;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.31.3000_0;has_internal_stop=true LTnewLM_31 . pseudogenic_transcript 1453480 1456308 . - . ID=LTnewLM_310042000.1;Parent=LTnewLM_310042000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_31 . pseudogenic_exon 1453480 1456308 . - . ID=LTnewLM_310042000.1:pseudogenic_exon:1;Parent=LTnewLM_310042000.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1453480 1456308 . - . ID=LTnewLM_310042000.1:pep;Derives_from=LTnewLM_310042000.1;orthologous_to=LmjF.31.3000_mRNA;ortholog_cluster=OG0007619;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 Liftoff gene 1457525 1459090 . - . ID=LTnewLM_310042100;coverage=1.0;sequence_ID=0.911;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.31.3010_0 LTnewLM_31 Liftoff mRNA 1457525 1459090 . - . ID=LTnewLM_310042100.1;Parent=LTnewLM_310042100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_31 Liftoff CDS 1457525 1459090 . - 0 ID=LTnewLM_310042100.1:CDS:1;Parent=LTnewLM_310042100.1;extra_copy_number=0 ### LTnewLM_31 . polypeptide 1457525 1459090 . - . ID=LTnewLM_310042100.1:pep;Derives_from=LTnewLM_310042100.1;orthologous_to=LmjF.31.3010_mRNA;ortholog_cluster=OG0004618;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1459403 1460826 0.61 - . ID=LTnewLM_310042200 LTnewLM_31 AUGUSTUS mRNA 1459403 1460826 0.61 - . ID=LTnewLM_310042200.1;Parent=LTnewLM_310042200 LTnewLM_31 AUGUSTUS CDS 1459403 1459860 0.93 - 2 ID=LTnewLM_310042200.1:CDS:1;Parent=LTnewLM_310042200.1 LTnewLM_31 AUGUSTUS CDS 1459941 1460826 0.61 - 0 ID=LTnewLM_310042200.1:CDS:2;Parent=LTnewLM_310042200.1 ### LTnewLM_31 . polypeptide 1459403 1460826 . - . ID=LTnewLM_310042200.1:pep;Derives_from=LTnewLM_310042200.1;orthologous_to=LmjF.31.3020_mRNA;ortholog_cluster=OG0004619;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1461459 1466792 1 - . ID=LTnewLM_310042300 LTnewLM_31 AUGUSTUS mRNA 1461459 1466792 1 - . ID=LTnewLM_310042300.1;Parent=LTnewLM_310042300 LTnewLM_31 AUGUSTUS CDS 1461459 1466792 1 - 0 ID=LTnewLM_310042300.1:CDS:1;Parent=LTnewLM_310042300.1 ### LTnewLM_31 . polypeptide 1461459 1466792 . - . ID=LTnewLM_310042300.1:pep;Derives_from=LTnewLM_310042300.1;orthologous_to=LmjF.31.3030_mRNA;ortholog_cluster=OG0004620;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1468459 1468686 1 - . ID=LTnewLM_310042400 LTnewLM_31 AUGUSTUS mRNA 1468459 1468686 1 - . ID=LTnewLM_310042400.1;Parent=LTnewLM_310042400 LTnewLM_31 AUGUSTUS CDS 1468459 1468686 1 - 0 ID=LTnewLM_310042400.1:CDS:1;Parent=LTnewLM_310042400.1 ### LTnewLM_31 . polypeptide 1468459 1468686 . - . ID=LTnewLM_310042400.1:pep;Derives_from=LTnewLM_310042400.1;product=term%3Dhypothetical protein ### LTnewLM_31 AUGUSTUS gene 1469839 1470585 1 - . ID=LTnewLM_310042500 LTnewLM_31 AUGUSTUS mRNA 1469839 1470585 1 - . ID=LTnewLM_310042500.1;Parent=LTnewLM_310042500 LTnewLM_31 AUGUSTUS CDS 1469839 1470585 1 - 0 ID=LTnewLM_310042500.1:CDS:1;Parent=LTnewLM_310042500.1 ### LTnewLM_31 . polypeptide 1469839 1470585 . - . ID=LTnewLM_310042500.1:pep;Derives_from=LTnewLM_310042500.1;orthologous_to=LmjF.31.3040_mRNA;ortholog_cluster=OG0004621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1471233 1471757 1 - . ID=LTnewLM_310042600 LTnewLM_31 AUGUSTUS mRNA 1471233 1471757 1 - . ID=LTnewLM_310042600.1;Parent=LTnewLM_310042600 LTnewLM_31 AUGUSTUS CDS 1471233 1471757 1 - 0 ID=LTnewLM_310042600.1:CDS:1;Parent=LTnewLM_310042600.1 ### LTnewLM_31 . polypeptide 1471233 1471757 . - . ID=LTnewLM_310042600.1:pep;Derives_from=LTnewLM_310042600.1;orthologous_to=LmjF.31.3050_mRNA;ortholog_cluster=OG0004622;product=term%3DPutative cyclase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04199;Ontology_term=GO:0019441,GO:0004061 LTnewLM_31 Pfam protein_match 1471509 1471748 . - . Parent=LTnewLM_310042600.1:pep;Name=PF04199;signature_desc=Putative cyclase;Ontology_term=GO:0004061,GO:0019441 ### LTnewLM_31 AUGUSTUS gene 1475011 1476309 1 - . ID=LTnewLM_310042700 LTnewLM_31 AUGUSTUS mRNA 1475011 1476309 1 - . ID=LTnewLM_310042700.1;Parent=LTnewLM_310042700 LTnewLM_31 AUGUSTUS CDS 1475011 1476309 1 - 0 ID=LTnewLM_310042700.1:CDS:1;Parent=LTnewLM_310042700.1 ### LTnewLM_31 . polypeptide 1475011 1476309 . - . ID=LTnewLM_310042700.1:pep;Derives_from=LTnewLM_310042700.1;orthologous_to=LTnewLM_310042800.1,LmjF.31.3060_mRNA,LmjF.31.3070_mRNA;ortholog_cluster=OG0000231;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_31 Pfam protein_match 1475029 1476150 . - . Parent=LTnewLM_310042700.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_31 AUGUSTUS gene 1479603 1480901 1 - . ID=LTnewLM_310042800 LTnewLM_31 AUGUSTUS mRNA 1479603 1480901 1 - . ID=LTnewLM_310042800.1;Parent=LTnewLM_310042800 LTnewLM_31 AUGUSTUS CDS 1479603 1480901 1 - 0 ID=LTnewLM_310042800.1:CDS:1;Parent=LTnewLM_310042800.1 ### LTnewLM_31 . polypeptide 1479603 1480901 . - . ID=LTnewLM_310042800.1:pep;Derives_from=LTnewLM_310042800.1;orthologous_to=LTnewLM_310042700.1,LmjF.31.3060_mRNA,LmjF.31.3070_mRNA;ortholog_cluster=OG0000231;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_31 Pfam protein_match 1479621 1480742 . - . Parent=LTnewLM_310042800.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_31 AUGUSTUS gene 1484643 1485728 1 - . ID=LTnewLM_310042900 LTnewLM_31 AUGUSTUS mRNA 1484643 1485728 1 - . ID=LTnewLM_310042900.1;Parent=LTnewLM_310042900 LTnewLM_31 AUGUSTUS CDS 1484643 1485728 1 - 0 ID=LTnewLM_310042900.1:CDS:1;Parent=LTnewLM_310042900.1 ### LTnewLM_31 . polypeptide 1484643 1485728 . - . ID=LTnewLM_310042900.1:pep;Derives_from=LTnewLM_310042900.1;orthologous_to=LmjF.31.3080_mRNA;ortholog_cluster=OG0004623;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1486368 1489760 1 - . ID=LTnewLM_310043000 LTnewLM_31 AUGUSTUS mRNA 1486368 1489760 1 - . ID=LTnewLM_310043000.1;Parent=LTnewLM_310043000 LTnewLM_31 AUGUSTUS CDS 1486368 1489760 1 - 0 ID=LTnewLM_310043000.1:CDS:1;Parent=LTnewLM_310043000.1 ### LTnewLM_31 . polypeptide 1486368 1489760 . - . ID=LTnewLM_310043000.1:pep;Derives_from=LTnewLM_310043000.1;orthologous_to=LmjF.31.3090_mRNA;ortholog_cluster=OG0004624;product=term%3DInsulinase (Peptidase family M16)/Peptidase M16 inactive domain/Middle or third domain of peptidase_M16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00675|Pfam:PF05193|Pfam:PF16187 LTnewLM_31 Pfam protein_match 1487439 1488089 . - . Parent=LTnewLM_310043000.1:pep;Name=PF16187;signature_desc=Middle or third domain of peptidase_M16 LTnewLM_31 Pfam protein_match 1488516 1489037 . - . Parent=LTnewLM_310043000.1:pep;Name=PF05193;signature_desc=Peptidase M16 inactive domain LTnewLM_31 Pfam protein_match 1489119 1489523 . - . Parent=LTnewLM_310043000.1:pep;Name=PF00675;signature_desc=Insulinase (Peptidase family M16) ### LTnewLM_31 AUGUSTUS gene 1490797 1491450 1 - . ID=LTnewLM_310043100 LTnewLM_31 AUGUSTUS mRNA 1490797 1491450 1 - . ID=LTnewLM_310043100.1;Parent=LTnewLM_310043100 LTnewLM_31 AUGUSTUS CDS 1490797 1491450 1 - 0 ID=LTnewLM_310043100.1:CDS:1;Parent=LTnewLM_310043100.1 ### LTnewLM_31 . polypeptide 1490797 1491450 . - . ID=LTnewLM_310043100.1:pep;Derives_from=LTnewLM_310043100.1;orthologous_to=LmjF.31.3100_mRNA;ortholog_cluster=OG0004625;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_31 Pfam protein_match 1491241 1491399 . - . Parent=LTnewLM_310043100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_31 AUGUSTUS gene 1491911 1492477 1 - . ID=LTnewLM_310043200 LTnewLM_31 AUGUSTUS mRNA 1491911 1492477 1 - . ID=LTnewLM_310043200.1;Parent=LTnewLM_310043200 LTnewLM_31 AUGUSTUS CDS 1491911 1492477 1 - 0 ID=LTnewLM_310043200.1:CDS:1;Parent=LTnewLM_310043200.1 ### LTnewLM_31 . polypeptide 1491911 1492477 . - . ID=LTnewLM_310043200.1:pep;Derives_from=LTnewLM_310043200.1;orthologous_to=LmjF.31.3105_mRNA;ortholog_cluster=OG0004626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1493630 1496170 1 - . ID=LTnewLM_310043300 LTnewLM_31 AUGUSTUS mRNA 1493630 1496170 1 - . ID=LTnewLM_310043300.1;Parent=LTnewLM_310043300 LTnewLM_31 AUGUSTUS CDS 1493630 1496170 1 - 0 ID=LTnewLM_310043300.1:CDS:1;Parent=LTnewLM_310043300.1 ### LTnewLM_31 . polypeptide 1493630 1496170 . - . ID=LTnewLM_310043300.1:pep;Derives_from=LTnewLM_310043300.1;orthologous_to=LmjF.31.3110_mRNA;ortholog_cluster=OG0004627;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1497102 1498850 1 - . ID=LTnewLM_310043400 LTnewLM_31 AUGUSTUS mRNA 1497102 1498850 1 - . ID=LTnewLM_310043400.1;Parent=LTnewLM_310043400 LTnewLM_31 AUGUSTUS CDS 1497102 1498850 1 - 0 ID=LTnewLM_310043400.1:CDS:1;Parent=LTnewLM_310043400.1 ### LTnewLM_31 . polypeptide 1497102 1498850 . - . ID=LTnewLM_310043400.1:pep;Derives_from=LTnewLM_310043400.1;orthologous_to=LmjF.31.3120_mRNA;ortholog_cluster=OG0004628;product=term%3DPhospholipid methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04191 LTnewLM_31 Pfam protein_match 1497225 1497533 . - . Parent=LTnewLM_310043400.1:pep;Name=PF04191;signature_desc=Phospholipid methyltransferase LTnewLM_31 Pfam protein_match 1497978 1498277 . - . Parent=LTnewLM_310043400.1:pep;Name=PF04191;signature_desc=Phospholipid methyltransferase ### LTnewLM_31 AUGUSTUS gene 1499648 1501711 1 - . ID=LTnewLM_310043500 LTnewLM_31 AUGUSTUS mRNA 1499648 1501711 1 - . ID=LTnewLM_310043500.1;Parent=LTnewLM_310043500 LTnewLM_31 AUGUSTUS CDS 1499648 1501711 1 - 0 ID=LTnewLM_310043500.1:CDS:1;Parent=LTnewLM_310043500.1 ### LTnewLM_31 . polypeptide 1499648 1501711 . - . ID=LTnewLM_310043500.1:pep;Derives_from=LTnewLM_310043500.1;orthologous_to=LmjF.31.3130_mRNA;ortholog_cluster=OG0004629;product=term%3DBiotin carboxylase%2C N-terminal domain/Carbamoyl-phosphate synthase L chain%2C ATP binding domain/ATP-grasp domain/D-ala D-ala ligase C-terminus/Biotin carboxylase C-terminal domain/Biotin-requiring enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00289|Pfam:PF02786|Pfam:PF02222|Pfam:PF07478|Pfam:PF02785|Pfam:PF00364;Ontology_term=GO:0003824,GO:0008152,GO:0005524,GO:0008716,GO:0016874 LTnewLM_31 Pfam protein_match 1499669 1499860 . - . Parent=LTnewLM_310043500.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_31 Pfam protein_match 1500323 1500655 . - . Parent=LTnewLM_310043500.1:pep;Name=PF02785;signature_desc=Biotin carboxylase C-terminal domain;Ontology_term=GO:0016874 LTnewLM_31 Pfam protein_match 1500698 1501333 . - . Parent=LTnewLM_310043500.1:pep;Name=PF02786;signature_desc=Carbamoyl-phosphate synthase L chain%2C ATP binding domain;Ontology_term=GO:0005524 LTnewLM_31 Pfam protein_match 1500803 1501300 . - . Parent=LTnewLM_310043500.1:pep;Name=PF02222;signature_desc=ATP-grasp domain LTnewLM_31 Pfam protein_match 1500806 1501264 . - . Parent=LTnewLM_310043500.1:pep;Name=PF07478;signature_desc=D-ala D-ala ligase C-terminus;Ontology_term=GO:0008716 LTnewLM_31 Pfam protein_match 1501352 1501675 . - . Parent=LTnewLM_310043500.1:pep;Name=PF00289;signature_desc=Biotin carboxylase%2C N-terminal domain;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_31 AUGUSTUS gene 1502278 1503435 1 - . ID=LTnewLM_310043600 LTnewLM_31 AUGUSTUS mRNA 1502278 1503435 1 - . ID=LTnewLM_310043600.1;Parent=LTnewLM_310043600 LTnewLM_31 AUGUSTUS CDS 1502278 1503435 1 - 0 ID=LTnewLM_310043600.1:CDS:1;Parent=LTnewLM_310043600.1 ### LTnewLM_31 . polypeptide 1502278 1503435 . - . ID=LTnewLM_310043600.1:pep;Derives_from=LTnewLM_310043600.1;orthologous_to=LmjF.31.3140_mRNA;ortholog_cluster=OG0004630;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1503775 1504146 0.47 - . ID=LTnewLM_310043700 LTnewLM_31 AUGUSTUS mRNA 1503775 1504146 0.47 - . ID=LTnewLM_310043700.1;Parent=LTnewLM_310043700 LTnewLM_31 AUGUSTUS CDS 1503775 1504146 0.47 - 0 ID=LTnewLM_310043700.1:CDS:1;Parent=LTnewLM_310043700.1 ### LTnewLM_31 . polypeptide 1503775 1504146 . - . ID=LTnewLM_310043700.1:pep;Derives_from=LTnewLM_310043700.1;orthologous_to=LmjF.31.3145_mRNA;ortholog_cluster=OG0004631;product=term%3DRoadblock/LC7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03259 LTnewLM_31 Pfam protein_match 1503817 1504095 . - . Parent=LTnewLM_310043700.1:pep;Name=PF03259;signature_desc=Roadblock/LC7 domain ### LTnewLM_31 AUGUSTUS gene 1504599 1509008 1 - . ID=LTnewLM_310043800 LTnewLM_31 AUGUSTUS mRNA 1504599 1509008 1 - . ID=LTnewLM_310043800.1;Parent=LTnewLM_310043800 LTnewLM_31 AUGUSTUS CDS 1504599 1509008 1 - 0 ID=LTnewLM_310043800.1:CDS:1;Parent=LTnewLM_310043800.1 ### LTnewLM_31 . polypeptide 1504599 1509008 . - . ID=LTnewLM_310043800.1:pep;Derives_from=LTnewLM_310043800.1;orthologous_to=LmjF.31.3150_mRNA;ortholog_cluster=OG0004632;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_31 AUGUSTUS gene 1509852 1511141 1 - . ID=LTnewLM_310043900 LTnewLM_31 AUGUSTUS mRNA 1509852 1511141 1 - . ID=LTnewLM_310043900.1;Parent=LTnewLM_310043900 LTnewLM_31 AUGUSTUS CDS 1509852 1511141 1 - 0 ID=LTnewLM_310043900.1:CDS:1;Parent=LTnewLM_310043900.1 ### LTnewLM_31 . polypeptide 1509852 1511141 . - . ID=LTnewLM_310043900.1:pep;Derives_from=LTnewLM_310043900.1;orthologous_to=LmjF.31.3160_mRNA;ortholog_cluster=OG0004633;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531|Pfam:PF00169;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_31 Pfam protein_match 1509876 1510151 . - . Parent=LTnewLM_310043900.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_31 Pfam protein_match 1510317 1511087 . - . Parent=LTnewLM_310043900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_31 Pfam protein_match 1510329 1511078 . - . Parent=LTnewLM_310043900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_31 Pfam protein_match 1510467 1510916 . - . Parent=LTnewLM_310043900.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_31 AUGUSTUS gene 1512801 1514708 1 + . ID=LTnewLM_310044000 LTnewLM_31 AUGUSTUS mRNA 1512801 1514708 1 + . ID=LTnewLM_310044000.1;Parent=LTnewLM_310044000 LTnewLM_31 AUGUSTUS CDS 1512801 1514708 1 + 0 ID=LTnewLM_310044000.1:CDS:1;Parent=LTnewLM_310044000.1 ### LTnewLM_31 . polypeptide 1512801 1514708 . + . ID=LTnewLM_310044000.1:pep;Derives_from=LTnewLM_310044000.1;orthologous_to=LmjF.31.3170_mRNA;ortholog_cluster=OG0004634;product=term%3DNodulin-like/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813|Pfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_31 Pfam protein_match 1512918 1513457 . + . Parent=LTnewLM_310044000.1:pep;Name=PF06813;signature_desc=Nodulin-like LTnewLM_31 Pfam protein_match 1512939 1513730 . + . Parent=LTnewLM_310044000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_31 AUGUSTUS gene 1515211 1515513 1 + . ID=LTnewLM_310044100 LTnewLM_31 AUGUSTUS mRNA 1515211 1515513 1 + . ID=LTnewLM_310044100.1;Parent=LTnewLM_310044100 LTnewLM_31 AUGUSTUS CDS 1515211 1515513 1 + 0 ID=LTnewLM_310044100.1:CDS:1;Parent=LTnewLM_310044100.1 ### LTnewLM_31 . polypeptide 1515211 1515513 . + . ID=LTnewLM_310044100.1:pep;Derives_from=LTnewLM_310044100.1;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_31 Pfam protein_match 1515292 1515477 . + . Parent=LTnewLM_310044100.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_31 Pfam protein_match 1515307 1515474 . + . Parent=LTnewLM_310044100.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_31 AUGUSTUS gene 1517421 1519863 1.06 + . ID=LTnewLM_310044200 LTnewLM_31 AUGUSTUS mRNA 1517421 1519863 0.59 + . ID=LTnewLM_310044200.1;Parent=LTnewLM_310044200 LTnewLM_31 AUGUSTUS CDS 1517421 1518760 0.71 + 0 ID=LTnewLM_310044200.1:CDS:1;Parent=LTnewLM_310044200.1 LTnewLM_31 AUGUSTUS CDS 1518837 1519863 0.79 + 1 ID=LTnewLM_310044200.1:CDS:2;Parent=LTnewLM_310044200.1 LTnewLM_31 AUGUSTUS mRNA 1517778 1519863 0.47 + . ID=LTnewLM_310044200.2;Parent=LTnewLM_310044200 LTnewLM_31 AUGUSTUS CDS 1517778 1518760 0.66 + 0 ID=LTnewLM_310044200.2:CDS:1;Parent=LTnewLM_310044200.2 LTnewLM_31 AUGUSTUS CDS 1518837 1519863 0.68 + 1 ID=LTnewLM_310044200.2:CDS:2;Parent=LTnewLM_310044200.2 ### LTnewLM_31 . polypeptide 1517421 1519863 . + . ID=LTnewLM_310044200.1:pep;Derives_from=LTnewLM_310044200.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.2,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3DGalactosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01762;Ontology_term=GO:0006486,GO:0008378,GO:0016020 LTnewLM_31 Pfam protein_match 1518876 1519196 . + . Parent=LTnewLM_310044200.1:pep;Name=PF01762;signature_desc=Galactosyltransferase;Ontology_term=GO:0008378,GO:0006486,GO:0016020 ### LTnewLM_31 . polypeptide 1517778 1519863 . + . ID=LTnewLM_310044200.2:pep;Derives_from=LTnewLM_310044200.2;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3DGalactosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01762;Ontology_term=GO:0006486,GO:0008378,GO:0016020 LTnewLM_31 Pfam protein_match 1518876 1519196 . + . Parent=LTnewLM_310044200.2:pep;Name=PF01762;signature_desc=Galactosyltransferase;Ontology_term=GO:0008378,GO:0006486,GO:0016020 ### LTnewLM_32 . contig 1 1538781 . + . Name=LTnewLM_CTG000033 LTnewLM_32 . pseudogene 1655 3754 1.2e+03 - . ID=LTnewLM_320005000:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.25.0340:mRNA 4 652;original_prot_length=662 LTnewLM_32 . pseudogenic_transcript 1655 3754 . - . ID=LTnewLM_320005000.1;Parent=LTnewLM_320005000:pseudogene LTnewLM_32 . pseudogenic_exon 1655 1681 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:1;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 1683 1691 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:2;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 1693 1719 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:3;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 1721 1984 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:4;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 1986 2012 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:5;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2014 2067 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:6;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2073 2084 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:7;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2086 2103 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:8;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2106 2129 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:9;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2131 2232 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:10;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2234 2317 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:11;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2319 2336 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:12;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2338 2406 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:13;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2409 2426 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:14;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2429 2638 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:15;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2640 2702 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:16;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2704 2748 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:17;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2750 2791 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:18;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2794 2820 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:19;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2822 2845 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:20;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2847 2876 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:21;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2878 2886 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:22;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2888 2911 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:23;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 2913 3095 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:24;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3097 3201 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:25;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3204 3260 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:26;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3262 3318 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:27;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3320 3334 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:28;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3337 3351 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:29;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3354 3368 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:30;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3371 3424 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:31;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3426 3536 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:32;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3539 3547 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:33;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3550 3567 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:34;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3569 3634 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:35;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3637 3654 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:36;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3657 3677 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:37;Parent=LTnewLM_320005000.1 LTnewLM_32 . pseudogenic_exon 3680 3754 . - . ID=LTnewLM_320005000.1:pseudogenic_exon:38;Parent=LTnewLM_320005000.1 ### LTnewLM_32 . polypeptide 1655 3754 . - . ID=LTnewLM_320005000.1:pep;Derives_from=LTnewLM_320005000.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 4439 4843 1 - . ID=LTnewLM_320005100 LTnewLM_32 AUGUSTUS mRNA 4439 4843 1 - . ID=LTnewLM_320005100.1;Parent=LTnewLM_320005100 LTnewLM_32 AUGUSTUS CDS 4439 4843 1 - 0 ID=LTnewLM_320005100.1:CDS:1;Parent=LTnewLM_320005100.1 ### LTnewLM_32 . polypeptide 4439 4843 . - . ID=LTnewLM_320005100.1:pep;Derives_from=LTnewLM_320005100.1;orthologous_to=LmjF.32.0010_mRNA;ortholog_cluster=OG0004635;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 5787 7271 1 - . ID=LTnewLM_320005200 LTnewLM_32 AUGUSTUS mRNA 5787 7271 1 - . ID=LTnewLM_320005200.1;Parent=LTnewLM_320005200 LTnewLM_32 AUGUSTUS CDS 5787 7271 1 - 0 ID=LTnewLM_320005200.1:CDS:1;Parent=LTnewLM_320005200.1 ### LTnewLM_32 . polypeptide 5787 7271 . - . ID=LTnewLM_320005200.1:pep;Derives_from=LTnewLM_320005200.1;orthologous_to=LmjF.32.0020_mRNA;ortholog_cluster=OG0004636;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 10981 12084 1 - . ID=LTnewLM_320005300 LTnewLM_32 AUGUSTUS mRNA 10981 12084 1 - . ID=LTnewLM_320005300.1;Parent=LTnewLM_320005300 LTnewLM_32 AUGUSTUS CDS 10981 12084 1 - 0 ID=LTnewLM_320005300.1:CDS:1;Parent=LTnewLM_320005300.1 ### LTnewLM_32 . polypeptide 10981 12084 . - . ID=LTnewLM_320005300.1:pep;Derives_from=LTnewLM_320005300.1;orthologous_to=LmjF.32.0030_mRNA;ortholog_cluster=OG0004637;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 13110 13796 0.49 - . ID=LTnewLM_320005400 LTnewLM_32 AUGUSTUS mRNA 13110 13796 0.49 - . ID=LTnewLM_320005400.1;Parent=LTnewLM_320005400 LTnewLM_32 AUGUSTUS CDS 13110 13694 0.93 - 0 ID=LTnewLM_320005400.1:CDS:1;Parent=LTnewLM_320005400.1 LTnewLM_32 AUGUSTUS CDS 13773 13796 0.49 - 0 ID=LTnewLM_320005400.1:CDS:2;Parent=LTnewLM_320005400.1 ### LTnewLM_32 . polypeptide 13110 13796 . - . ID=LTnewLM_320005400.1:pep;Derives_from=LTnewLM_320005400.1;orthologous_to=LTnewLM_170018700.1,LTnewLM_340012200.1;ortholog_cluster=OG0000357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 14505 14872 0.44 - . ID=LTnewLM_320005500 LTnewLM_32 AUGUSTUS mRNA 14505 14872 0.44 - . ID=LTnewLM_320005500.1;Parent=LTnewLM_320005500 LTnewLM_32 AUGUSTUS CDS 14505 14699 0.81 - 0 ID=LTnewLM_320005500.1:CDS:1;Parent=LTnewLM_320005500.1 LTnewLM_32 AUGUSTUS CDS 14774 14872 0.46 - 0 ID=LTnewLM_320005500.1:CDS:2;Parent=LTnewLM_320005500.1 ### LTnewLM_32 . polypeptide 14505 14872 . - . ID=LTnewLM_320005500.1:pep;Derives_from=LTnewLM_320005500.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 16710 17855 1 - . ID=LTnewLM_320005600 LTnewLM_32 AUGUSTUS mRNA 16710 17855 1 - . ID=LTnewLM_320005600.1;Parent=LTnewLM_320005600 LTnewLM_32 AUGUSTUS CDS 16710 17855 1 - 0 ID=LTnewLM_320005600.1:CDS:1;Parent=LTnewLM_320005600.1 ### LTnewLM_32 . polypeptide 16710 17855 . - . ID=LTnewLM_320005600.1:pep;Derives_from=LTnewLM_320005600.1;orthologous_to=LmjF.32.0040_mRNA;ortholog_cluster=OG0004638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 20135 21178 1 - . ID=LTnewLM_320005700 LTnewLM_32 AUGUSTUS mRNA 20135 21178 1 - . ID=LTnewLM_320005700.1;Parent=LTnewLM_320005700 LTnewLM_32 AUGUSTUS CDS 20135 21178 1 - 0 ID=LTnewLM_320005700.1:CDS:1;Parent=LTnewLM_320005700.1 ### LTnewLM_32 . polypeptide 20135 21178 . - . ID=LTnewLM_320005700.1:pep;Derives_from=LTnewLM_320005700.1;orthologous_to=LmjF.32.0050_mRNA;ortholog_cluster=OG0004639;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 20369 20479 . - . Parent=LTnewLM_320005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 20531 20587 . - . Parent=LTnewLM_320005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 20843 20953 . - . Parent=LTnewLM_320005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_32 Liftoff gene 21865 23016 . - . ID=LTnewLM_320005800;coverage=1.0;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.0060_0 LTnewLM_32 Liftoff mRNA 21865 23016 . - . ID=LTnewLM_320005800.1;Parent=LTnewLM_320005800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 21865 23016 . - 0 ID=LTnewLM_320005800.1:CDS:1;Parent=LTnewLM_320005800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 21865 23016 . - . ID=LTnewLM_320005800.1:pep;Derives_from=LTnewLM_320005800.1;orthologous_to=LmjF.32.0060_mRNA;ortholog_cluster=OG0004640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 23834 24757 1 - . ID=LTnewLM_320005900 LTnewLM_32 AUGUSTUS mRNA 23834 24757 1 - . ID=LTnewLM_320005900.1;Parent=LTnewLM_320005900 LTnewLM_32 AUGUSTUS CDS 23834 24757 1 - 0 ID=LTnewLM_320005900.1:CDS:1;Parent=LTnewLM_320005900.1 ### LTnewLM_32 . polypeptide 23834 24757 . - . ID=LTnewLM_320005900.1:pep;Derives_from=LTnewLM_320005900.1;orthologous_to=LmjF.32.0070_mRNA;ortholog_cluster=OG0004641;product=term%3DSNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05739;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 23858 24010 . - . Parent=LTnewLM_320005900.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 25677 26942 1 - . ID=LTnewLM_320006000 LTnewLM_32 AUGUSTUS mRNA 25677 26942 1 - . ID=LTnewLM_320006000.1;Parent=LTnewLM_320006000 LTnewLM_32 AUGUSTUS CDS 25677 26942 1 - 0 ID=LTnewLM_320006000.1:CDS:1;Parent=LTnewLM_320006000.1 ### LTnewLM_32 . polypeptide 25677 26942 . - . ID=LTnewLM_320006000.1:pep;Derives_from=LTnewLM_320006000.1;orthologous_to=LmjF.32.0080_mRNA;ortholog_cluster=OG0004642;product=term%3DMyristoyl-CoA:protein N-myristoyltransferase%2C N-terminal domain/Myristoyl-CoA:protein N-myristoyltransferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01233|Pfam:PF02799;Ontology_term=GO:0004379 LTnewLM_32 Pfam protein_match 25710 26258 . - . Parent=LTnewLM_320006000.1:pep;Name=PF02799;signature_desc=Myristoyl-CoA:protein N-myristoyltransferase%2C C-terminal domain;Ontology_term=GO:0004379 LTnewLM_32 Pfam protein_match 26307 26840 . - . Parent=LTnewLM_320006000.1:pep;Name=PF01233;signature_desc=Myristoyl-CoA:protein N-myristoyltransferase%2C N-terminal domain;Ontology_term=GO:0004379 ### LTnewLM_32 AUGUSTUS gene 29069 29983 1 - . ID=LTnewLM_320006100 LTnewLM_32 AUGUSTUS mRNA 29069 29983 1 - . ID=LTnewLM_320006100.1;Parent=LTnewLM_320006100 LTnewLM_32 AUGUSTUS CDS 29069 29983 1 - 0 ID=LTnewLM_320006100.1:CDS:1;Parent=LTnewLM_320006100.1 ### LTnewLM_32 . polypeptide 29069 29983 . - . ID=LTnewLM_320006100.1:pep;Derives_from=LTnewLM_320006100.1;orthologous_to=LmjF.32.0090_mRNA;ortholog_cluster=OG0004643;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 32939 33634 1 - . ID=LTnewLM_320006200 LTnewLM_32 AUGUSTUS mRNA 32939 33634 1 - . ID=LTnewLM_320006200.1;Parent=LTnewLM_320006200 LTnewLM_32 AUGUSTUS CDS 32939 33634 1 - 0 ID=LTnewLM_320006200.1:CDS:1;Parent=LTnewLM_320006200.1 ### LTnewLM_32 . polypeptide 32939 33634 . - . ID=LTnewLM_320006200.1:pep;Derives_from=LTnewLM_320006200.1;orthologous_to=LmjF.32.0100_mRNA;ortholog_cluster=OG0004644;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 33107 33565 . - . Parent=LTnewLM_320006200.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 35438 36376 1 - . ID=LTnewLM_320006300 LTnewLM_32 AUGUSTUS mRNA 35438 36376 1 - . ID=LTnewLM_320006300.1;Parent=LTnewLM_320006300 LTnewLM_32 AUGUSTUS CDS 35438 36376 1 - 0 ID=LTnewLM_320006300.1:CDS:1;Parent=LTnewLM_320006300.1 ### LTnewLM_32 . polypeptide 35438 36376 . - . ID=LTnewLM_320006300.1:pep;Derives_from=LTnewLM_320006300.1;orthologous_to=LmjF.32.0110_mRNA;ortholog_cluster=OG0004645;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_32 Pfam protein_match 35456 35731 . - . Parent=LTnewLM_320006300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 35777 36079 . - . Parent=LTnewLM_320006300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 36284 36373 . - . Parent=LTnewLM_320006300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_32 AUGUSTUS gene 38423 41791 1 - . ID=LTnewLM_320006400 LTnewLM_32 AUGUSTUS mRNA 38423 41791 1 - . ID=LTnewLM_320006400.1;Parent=LTnewLM_320006400 LTnewLM_32 AUGUSTUS CDS 38423 41791 1 - 0 ID=LTnewLM_320006400.1:CDS:1;Parent=LTnewLM_320006400.1 ### LTnewLM_32 . polypeptide 38423 41791 . - . ID=LTnewLM_320006400.1:pep;Derives_from=LTnewLM_320006400.1;orthologous_to=LmjF.32.0120_mRNA;ortholog_cluster=OG0004646;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 40064 40846 . - . Parent=LTnewLM_320006400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 40079 40843 . - . Parent=LTnewLM_320006400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 44153 44872 1 - . ID=LTnewLM_320006500 LTnewLM_32 AUGUSTUS mRNA 44153 44872 1 - . ID=LTnewLM_320006500.1;Parent=LTnewLM_320006500 LTnewLM_32 AUGUSTUS CDS 44153 44872 1 - 0 ID=LTnewLM_320006500.1:CDS:1;Parent=LTnewLM_320006500.1 ### LTnewLM_32 . polypeptide 44153 44872 . - . ID=LTnewLM_320006500.1:pep;Derives_from=LTnewLM_320006500.1;orthologous_to=LmjF.32.0130_mRNA;ortholog_cluster=OG0004647;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 46306 49434 1 - . ID=LTnewLM_320006600 LTnewLM_32 AUGUSTUS mRNA 46306 49434 1 - . ID=LTnewLM_320006600.1;Parent=LTnewLM_320006600 LTnewLM_32 AUGUSTUS CDS 46306 49434 1 - 0 ID=LTnewLM_320006600.1:CDS:1;Parent=LTnewLM_320006600.1 ### LTnewLM_32 . polypeptide 46306 49434 . - . ID=LTnewLM_320006600.1:pep;Derives_from=LTnewLM_320006600.1;orthologous_to=LmjF.32.0140_mRNA;ortholog_cluster=OG0004648;product=term%3DArmadillo/beta-catenin-like repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00514;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 47719 47835 . - . Parent=LTnewLM_320006600.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 47848 47991 . - . Parent=LTnewLM_320006600.1:pep;Name=PF00514;signature_desc=Armadillo/beta-catenin-like repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 50759 53755 1 - . ID=LTnewLM_320006700 LTnewLM_32 AUGUSTUS mRNA 50759 53755 1 - . ID=LTnewLM_320006700.1;Parent=LTnewLM_320006700 LTnewLM_32 AUGUSTUS CDS 50759 53755 1 - 0 ID=LTnewLM_320006700.1:CDS:1;Parent=LTnewLM_320006700.1 ### LTnewLM_32 . polypeptide 50759 53755 . - . ID=LTnewLM_320006700.1:pep;Derives_from=LTnewLM_320006700.1;orthologous_to=LmjF.32.0150_mRNA;ortholog_cluster=OG0004649;product=term%3DUtp14 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04615;Ontology_term=GO:0006364,GO:0032040 LTnewLM_32 Pfam protein_match 50834 53206 . - . Parent=LTnewLM_320006700.1:pep;Name=PF04615;signature_desc=Utp14 protein;Ontology_term=GO:0006364,GO:0032040 ### LTnewLM_32 AUGUSTUS gene 54819 56687 1 - . ID=LTnewLM_320006800 LTnewLM_32 AUGUSTUS mRNA 54819 56687 1 - . ID=LTnewLM_320006800.1;Parent=LTnewLM_320006800 LTnewLM_32 AUGUSTUS CDS 54819 56687 1 - 0 ID=LTnewLM_320006800.1:CDS:1;Parent=LTnewLM_320006800.1 ### LTnewLM_32 . polypeptide 54819 56687 . - . ID=LTnewLM_320006800.1:pep;Derives_from=LTnewLM_320006800.1;orthologous_to=LmjF.32.0160_mRNA;ortholog_cluster=OG0004650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 57323 57598 1 - . ID=LTnewLM_320006900 LTnewLM_32 AUGUSTUS mRNA 57323 57598 1 - . ID=LTnewLM_320006900.1;Parent=LTnewLM_320006900 LTnewLM_32 AUGUSTUS CDS 57323 57598 1 - 0 ID=LTnewLM_320006900.1:CDS:1;Parent=LTnewLM_320006900.1 ### LTnewLM_32 . polypeptide 57323 57598 . - . ID=LTnewLM_320006900.1:pep;Derives_from=LTnewLM_320006900.1;orthologous_to=LmjF.32.0165_mRNA;ortholog_cluster=OG0004651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 58284 59210 1 - . ID=LTnewLM_320007000 LTnewLM_32 AUGUSTUS mRNA 58284 59210 1 - . ID=LTnewLM_320007000.1;Parent=LTnewLM_320007000 LTnewLM_32 AUGUSTUS CDS 58284 59210 1 - 0 ID=LTnewLM_320007000.1:CDS:1;Parent=LTnewLM_320007000.1 ### LTnewLM_32 . polypeptide 58284 59210 . - . ID=LTnewLM_320007000.1:pep;Derives_from=LTnewLM_320007000.1;orthologous_to=LmjF.32.0170_mRNA;ortholog_cluster=OG0004652;product=term%3DLeucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580 LTnewLM_32 Pfam protein_match 58668 59207 . - . Parent=LTnewLM_320007000.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_32 AUGUSTUS gene 59929 60279 1 - . ID=LTnewLM_320007100 LTnewLM_32 AUGUSTUS mRNA 59929 60279 1 - . ID=LTnewLM_320007100.1;Parent=LTnewLM_320007100 LTnewLM_32 AUGUSTUS CDS 59929 60279 1 - 0 ID=LTnewLM_320007100.1:CDS:1;Parent=LTnewLM_320007100.1 ### LTnewLM_32 . polypeptide 59929 60279 . - . ID=LTnewLM_320007100.1:pep;Derives_from=LTnewLM_320007100.1;orthologous_to=LmjF.32.0180_mRNA;ortholog_cluster=OG0004653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 61186 63492 1 - . ID=LTnewLM_320007200 LTnewLM_32 AUGUSTUS mRNA 61186 63492 1 - . ID=LTnewLM_320007200.1;Parent=LTnewLM_320007200 LTnewLM_32 AUGUSTUS CDS 61186 63492 1 - 0 ID=LTnewLM_320007200.1:CDS:1;Parent=LTnewLM_320007200.1 ### LTnewLM_32 . polypeptide 61186 63492 . - . ID=LTnewLM_320007200.1:pep;Derives_from=LTnewLM_320007200.1;orthologous_to=LmjF.32.0190_mRNA;ortholog_cluster=OG0004654;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 64179 65522 0.66 - . ID=LTnewLM_320007300 LTnewLM_32 AUGUSTUS mRNA 64179 65522 0.66 - . ID=LTnewLM_320007300.1;Parent=LTnewLM_320007300 LTnewLM_32 AUGUSTUS CDS 64179 65522 0.66 - 0 ID=LTnewLM_320007300.1:CDS:1;Parent=LTnewLM_320007300.1 ### LTnewLM_32 . polypeptide 64179 65522 . - . ID=LTnewLM_320007300.1:pep;Derives_from=LTnewLM_320007300.1;orthologous_to=LmjF.32.0200_mRNA;ortholog_cluster=OG0004655;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 66494 68074 1 - . ID=LTnewLM_320007400 LTnewLM_32 AUGUSTUS mRNA 66494 68074 1 - . ID=LTnewLM_320007400.1;Parent=LTnewLM_320007400 LTnewLM_32 AUGUSTUS CDS 66494 68074 1 - 0 ID=LTnewLM_320007400.1:CDS:1;Parent=LTnewLM_320007400.1 ### LTnewLM_32 . polypeptide 66494 68074 . - . ID=LTnewLM_320007400.1:pep;Derives_from=LTnewLM_320007400.1;orthologous_to=LmjF.32.0210_mRNA;ortholog_cluster=OG0004656;product=term%3DStructure-specific recognition protein (SSRP1)/Histone chaperone Rttp106-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03531|Pfam:PF08512 LTnewLM_32 Pfam protein_match 66809 67036 . - . Parent=LTnewLM_320007400.1:pep;Name=PF08512;signature_desc=Histone chaperone Rttp106-like LTnewLM_32 Pfam protein_match 67775 67912 . - . Parent=LTnewLM_320007400.1:pep;Name=PF03531;signature_desc=Structure-specific recognition protein (SSRP1) ### LTnewLM_32 AUGUSTUS gene 70056 73136 1 - . ID=LTnewLM_320007500 LTnewLM_32 AUGUSTUS mRNA 70056 73136 1 - . ID=LTnewLM_320007500.1;Parent=LTnewLM_320007500 LTnewLM_32 AUGUSTUS CDS 70056 73136 1 - 0 ID=LTnewLM_320007500.1:CDS:1;Parent=LTnewLM_320007500.1 ### LTnewLM_32 . polypeptide 70056 73136 . - . ID=LTnewLM_320007500.1:pep;Derives_from=LTnewLM_320007500.1;orthologous_to=LmjF.32.0220_mRNA;ortholog_cluster=OG0004657;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 75400 75675 1 - . ID=LTnewLM_320007600 LTnewLM_32 AUGUSTUS mRNA 75400 75675 1 - . ID=LTnewLM_320007600.1;Parent=LTnewLM_320007600 LTnewLM_32 AUGUSTUS CDS 75400 75675 1 - 0 ID=LTnewLM_320007600.1:CDS:1;Parent=LTnewLM_320007600.1 ### LTnewLM_32 . polypeptide 75400 75675 . - . ID=LTnewLM_320007600.1:pep;Derives_from=LTnewLM_320007600.1;orthologous_to=LmjF.32.0230_mRNA;ortholog_cluster=OG0004658;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_32 Pfam protein_match 75409 75657 . - . Parent=LTnewLM_320007600.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_32 AUGUSTUS gene 76697 79957 1 - . ID=LTnewLM_320007700 LTnewLM_32 AUGUSTUS mRNA 76697 79957 1 - . ID=LTnewLM_320007700.1;Parent=LTnewLM_320007700 LTnewLM_32 AUGUSTUS CDS 76697 79957 1 - 0 ID=LTnewLM_320007700.1:CDS:1;Parent=LTnewLM_320007700.1 ### LTnewLM_32 . polypeptide 76697 79957 . - . ID=LTnewLM_320007700.1:pep;Derives_from=LTnewLM_320007700.1;orthologous_to=LmjF.32.0240_mRNA;ortholog_cluster=OG0004659;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 82249 88611 1 - . ID=LTnewLM_320007800 LTnewLM_32 AUGUSTUS mRNA 82249 88611 1 - . ID=LTnewLM_320007800.1;Parent=LTnewLM_320007800 LTnewLM_32 AUGUSTUS CDS 82249 87658 1 - 1 ID=LTnewLM_320007800.1:CDS:1;Parent=LTnewLM_320007800.1 LTnewLM_32 AUGUSTUS CDS 87746 88611 1 - 0 ID=LTnewLM_320007800.1:CDS:2;Parent=LTnewLM_320007800.1 ### LTnewLM_32 . polypeptide 82249 88611 . - . ID=LTnewLM_320007800.1:pep;Derives_from=LTnewLM_320007800.1;orthologous_to=LmjF.32.0250_mRNA;ortholog_cluster=OG0004660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 90112 94194 1 - . ID=LTnewLM_320007900 LTnewLM_32 AUGUSTUS mRNA 90112 94194 1 - . ID=LTnewLM_320007900.1;Parent=LTnewLM_320007900 LTnewLM_32 AUGUSTUS CDS 90112 94194 1 - 0 ID=LTnewLM_320007900.1:CDS:1;Parent=LTnewLM_320007900.1 ### LTnewLM_32 . polypeptide 90112 94194 . - . ID=LTnewLM_320007900.1:pep;Derives_from=LTnewLM_320007900.1;orthologous_to=LmjF.32.0260_mRNA;ortholog_cluster=OG0004661;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 93430 94185 . - . Parent=LTnewLM_320007900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 93442 94176 . - . Parent=LTnewLM_320007900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 97624 101529 1 - . ID=LTnewLM_320008000 LTnewLM_32 AUGUSTUS mRNA 97624 101529 1 - . ID=LTnewLM_320008000.1;Parent=LTnewLM_320008000 LTnewLM_32 AUGUSTUS CDS 97624 101529 1 - 0 ID=LTnewLM_320008000.1:CDS:1;Parent=LTnewLM_320008000.1 ### LTnewLM_32 . polypeptide 97624 101529 . - . ID=LTnewLM_320008000.1:pep;Derives_from=LTnewLM_320008000.1;orthologous_to=LmjF.32.0270_mRNA;ortholog_cluster=OG0004662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 102941 103645 1 - . ID=LTnewLM_320008100 LTnewLM_32 AUGUSTUS mRNA 102941 103645 1 - . ID=LTnewLM_320008100.1;Parent=LTnewLM_320008100 LTnewLM_32 AUGUSTUS CDS 102941 103645 1 - 0 ID=LTnewLM_320008100.1:CDS:1;Parent=LTnewLM_320008100.1 ### LTnewLM_32 . polypeptide 102941 103645 . - . ID=LTnewLM_320008100.1:pep;Derives_from=LTnewLM_320008100.1;orthologous_to=LmjF.32.0280_mRNA;ortholog_cluster=OG0004663;product=term%3DCiliary basal body-associated%2C B9 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07162 LTnewLM_32 Pfam protein_match 102980 103588 . - . Parent=LTnewLM_320008100.1:pep;Name=PF07162;signature_desc=Ciliary basal body-associated%2C B9 protein ### LTnewLM_32 AUGUSTUS gene 104866 105897 1 - . ID=LTnewLM_320008200 LTnewLM_32 AUGUSTUS mRNA 104866 105897 1 - . ID=LTnewLM_320008200.1;Parent=LTnewLM_320008200 LTnewLM_32 AUGUSTUS CDS 104866 105897 1 - 0 ID=LTnewLM_320008200.1:CDS:1;Parent=LTnewLM_320008200.1 ### LTnewLM_32 . polypeptide 104866 105897 . - . ID=LTnewLM_320008200.1:pep;Derives_from=LTnewLM_320008200.1;orthologous_to=LmjF.32.0290_mRNA;ortholog_cluster=OG0004664;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 106936 109224 1 - . ID=LTnewLM_320008300 LTnewLM_32 AUGUSTUS mRNA 106936 109224 1 - . ID=LTnewLM_320008300.1;Parent=LTnewLM_320008300 LTnewLM_32 AUGUSTUS CDS 106936 109224 1 - 0 ID=LTnewLM_320008300.1:CDS:1;Parent=LTnewLM_320008300.1 ### LTnewLM_32 . polypeptide 106936 109224 . - . ID=LTnewLM_320008300.1:pep;Derives_from=LTnewLM_320008300.1;orthologous_to=LmjF.32.0300_mRNA;ortholog_cluster=OG0004665;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 108289 108450 . - . Parent=LTnewLM_320008300.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 110236 115203 1 - . ID=LTnewLM_320008400 LTnewLM_32 AUGUSTUS mRNA 110236 115203 1 - . ID=LTnewLM_320008400.1;Parent=LTnewLM_320008400 LTnewLM_32 AUGUSTUS CDS 110236 115203 1 - 0 ID=LTnewLM_320008400.1:CDS:1;Parent=LTnewLM_320008400.1 ### LTnewLM_32 . polypeptide 110236 115203 . - . ID=LTnewLM_320008400.1:pep;Derives_from=LTnewLM_320008400.1;orthologous_to=LmjF.32.0310_mRNA;ortholog_cluster=OG0004666;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 116296 117222 1 - . ID=LTnewLM_320008500 LTnewLM_32 AUGUSTUS mRNA 116296 117222 1 - . ID=LTnewLM_320008500.1;Parent=LTnewLM_320008500 LTnewLM_32 AUGUSTUS CDS 116296 117222 1 - 0 ID=LTnewLM_320008500.1:CDS:1;Parent=LTnewLM_320008500.1 ### LTnewLM_32 . polypeptide 116296 117222 . - . ID=LTnewLM_320008500.1:pep;Derives_from=LTnewLM_320008500.1;orthologous_to=LmjF.32.0320_mRNA;ortholog_cluster=OG0004667;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 118813 123429 1 - . ID=LTnewLM_320008600 LTnewLM_32 AUGUSTUS mRNA 118813 123429 1 - . ID=LTnewLM_320008600.1;Parent=LTnewLM_320008600 LTnewLM_32 AUGUSTUS CDS 118813 123429 1 - 0 ID=LTnewLM_320008600.1:CDS:1;Parent=LTnewLM_320008600.1 ### LTnewLM_32 . polypeptide 118813 123429 . - . ID=LTnewLM_320008600.1:pep;Derives_from=LTnewLM_320008600.1;orthologous_to=LmjF.32.0330_mRNA;ortholog_cluster=OG0004668;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 124888 127569 1 - . ID=LTnewLM_320008700 LTnewLM_32 AUGUSTUS mRNA 124888 127569 1 - . ID=LTnewLM_320008700.1;Parent=LTnewLM_320008700 LTnewLM_32 AUGUSTUS CDS 124888 127569 1 - 0 ID=LTnewLM_320008700.1:CDS:1;Parent=LTnewLM_320008700.1 ### LTnewLM_32 . polypeptide 124888 127569 . - . ID=LTnewLM_320008700.1:pep;Derives_from=LTnewLM_320008700.1;orthologous_to=LmjF.32.0340_mRNA;ortholog_cluster=OG0004669;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 129571 130971 1 - . ID=LTnewLM_320008800 LTnewLM_32 AUGUSTUS mRNA 129571 130971 1 - . ID=LTnewLM_320008800.1;Parent=LTnewLM_320008800 LTnewLM_32 AUGUSTUS CDS 129571 130971 1 - 0 ID=LTnewLM_320008800.1:CDS:1;Parent=LTnewLM_320008800.1 ### LTnewLM_32 . polypeptide 129571 130971 . - . ID=LTnewLM_320008800.1:pep;Derives_from=LTnewLM_320008800.1;orthologous_to=LmjF.32.0350_mRNA;ortholog_cluster=OG0004670;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 132055 133155 1 - . ID=LTnewLM_320008900 LTnewLM_32 AUGUSTUS mRNA 132055 133155 1 - . ID=LTnewLM_320008900.1;Parent=LTnewLM_320008900 LTnewLM_32 AUGUSTUS CDS 132055 133155 1 - 0 ID=LTnewLM_320008900.1:CDS:1;Parent=LTnewLM_320008900.1 ### LTnewLM_32 . polypeptide 132055 133155 . - . ID=LTnewLM_320008900.1:pep;Derives_from=LTnewLM_320008900.1;orthologous_to=LmjF.32.0360_mRNA;ortholog_cluster=OG0004671;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 133948 136833 0.42 - . ID=LTnewLM_320009000 LTnewLM_32 AUGUSTUS mRNA 133948 136833 0.42 - . ID=LTnewLM_320009000.1;Parent=LTnewLM_320009000 LTnewLM_32 AUGUSTUS CDS 133948 136833 0.42 - 0 ID=LTnewLM_320009000.1:CDS:1;Parent=LTnewLM_320009000.1 ### LTnewLM_32 . polypeptide 133948 136833 . - . ID=LTnewLM_320009000.1:pep;Derives_from=LTnewLM_320009000.1;orthologous_to=LmjF.32.0370_mRNA;ortholog_cluster=OG0004672;product=term%3DRoot hair defective 3 GTP-binding protein (RHD3) GTPase domain/Sey1 three-helix bundle domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05879|Pfam:PF20428 LTnewLM_32 Pfam protein_match 134227 134562 . - . Parent=LTnewLM_320009000.1:pep;Name=PF20428;signature_desc=Sey1 three-helix bundle domain LTnewLM_32 Pfam protein_match 135577 136455 . - . Parent=LTnewLM_320009000.1:pep;Name=PF05879;signature_desc=Root hair defective 3 GTP-binding protein (RHD3) GTPase domain ### LTnewLM_32 AUGUSTUS gene 138670 140244 1 - . ID=LTnewLM_320009100 LTnewLM_32 AUGUSTUS mRNA 138670 140244 1 - . ID=LTnewLM_320009100.1;Parent=LTnewLM_320009100 LTnewLM_32 AUGUSTUS CDS 138670 140244 1 - 0 ID=LTnewLM_320009100.1:CDS:1;Parent=LTnewLM_320009100.1 ### LTnewLM_32 . polypeptide 138670 140244 . - . ID=LTnewLM_320009100.1:pep;Derives_from=LTnewLM_320009100.1;orthologous_to=LmjF.32.0380_mRNA;ortholog_cluster=OG0004673;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 141443 142522 1 - . ID=LTnewLM_320009200 LTnewLM_32 AUGUSTUS mRNA 141443 142522 1 - . ID=LTnewLM_320009200.1;Parent=LTnewLM_320009200 LTnewLM_32 AUGUSTUS CDS 141443 142522 1 - 0 ID=LTnewLM_320009200.1:CDS:1;Parent=LTnewLM_320009200.1 ### LTnewLM_32 . polypeptide 141443 142522 . - . ID=LTnewLM_320009200.1:pep;Derives_from=LTnewLM_320009200.1;orthologous_to=LmjF.32.0390_mRNA;ortholog_cluster=OG0004674;product=term%3DJAB1/Mov34/MPN/PAD-1 ubiquitin protease/Maintenance of mitochondrial structure and function%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01398|Pfam:PF13012;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 141584 141910 . - . Parent=LTnewLM_320009200.1:pep;Name=PF13012;signature_desc=Maintenance of mitochondrial structure and function LTnewLM_32 Pfam protein_match 142076 142396 . - . Parent=LTnewLM_320009200.1:pep;Name=PF01398;signature_desc=JAB1/Mov34/MPN/PAD-1 ubiquitin protease;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 155708 157552 1 - . ID=LTnewLM_320009300 LTnewLM_32 AUGUSTUS mRNA 155708 157552 1 - . ID=LTnewLM_320009300.1;Parent=LTnewLM_320009300 LTnewLM_32 AUGUSTUS CDS 155708 157552 1 - 0 ID=LTnewLM_320009300.1:CDS:1;Parent=LTnewLM_320009300.1 ### LTnewLM_32 . polypeptide 155708 157552 . - . ID=LTnewLM_320009300.1:pep;Derives_from=LTnewLM_320009300.1;orthologous_to=LmjF.32.0400_mRNA;ortholog_cluster=OG0004675;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 156110 156433 . - . Parent=LTnewLM_320009300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_32 Pfam protein_match 156542 157084 . - . Parent=LTnewLM_320009300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_32 AUGUSTUS gene 158652 160934 1 - . ID=LTnewLM_320009400 LTnewLM_32 AUGUSTUS mRNA 158652 160934 1 - . ID=LTnewLM_320009400.1;Parent=LTnewLM_320009400 LTnewLM_32 AUGUSTUS CDS 158652 160934 1 - 0 ID=LTnewLM_320009400.1:CDS:1;Parent=LTnewLM_320009400.1 ### LTnewLM_32 . polypeptide 158652 160934 . - . ID=LTnewLM_320009400.1:pep;Derives_from=LTnewLM_320009400.1;orthologous_to=LmjF.32.0410_mRNA;ortholog_cluster=OG0004676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 161879 164038 1 - . ID=LTnewLM_320009500 LTnewLM_32 AUGUSTUS mRNA 161879 164038 1 - . ID=LTnewLM_320009500.1;Parent=LTnewLM_320009500 LTnewLM_32 AUGUSTUS CDS 161879 164038 1 - 0 ID=LTnewLM_320009500.1:CDS:1;Parent=LTnewLM_320009500.1 ### LTnewLM_32 . polypeptide 161879 164038 . - . ID=LTnewLM_320009500.1:pep;Derives_from=LTnewLM_320009500.1;orthologous_to=LmjF.32.0420_mRNA;ortholog_cluster=OG0004677;product=term%3DMicrotubule binding/Kinesin motor domain/MORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225|Pfam:PF02493;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_32 Pfam protein_match 162212 162268 . - . Parent=LTnewLM_320009500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_32 Pfam protein_match 162341 162406 . - . Parent=LTnewLM_320009500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_32 Pfam protein_match 162413 162475 . - . Parent=LTnewLM_320009500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_32 Pfam protein_match 162518 162562 . - . Parent=LTnewLM_320009500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_32 Pfam protein_match 162587 162628 . - . Parent=LTnewLM_320009500.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_32 Pfam protein_match 162974 163882 . - . Parent=LTnewLM_320009500.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_32 Pfam protein_match 163574 163978 . - . Parent=LTnewLM_320009500.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_32 AUGUSTUS gene 165223 165723 1 - . ID=LTnewLM_320009600 LTnewLM_32 AUGUSTUS mRNA 165223 165723 1 - . ID=LTnewLM_320009600.1;Parent=LTnewLM_320009600 LTnewLM_32 AUGUSTUS CDS 165223 165723 1 - 0 ID=LTnewLM_320009600.1:CDS:1;Parent=LTnewLM_320009600.1 ### LTnewLM_32 . polypeptide 165223 165723 . - . ID=LTnewLM_320009600.1:pep;Derives_from=LTnewLM_320009600.1;orthologous_to=LTnewLM_240005300.1,LmjF.24.0040_mRNA;ortholog_cluster=OG0000389;product=term%3DRibosomal protein L22p/L17e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00237;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_32 Pfam protein_match 165280 165675 . - . Parent=LTnewLM_320009600.1:pep;Name=PF00237;signature_desc=Ribosomal protein L22p/L17e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_32 AUGUSTUS gene 167369 168244 1 - . ID=LTnewLM_320009700 LTnewLM_32 AUGUSTUS mRNA 167369 168244 1 - . ID=LTnewLM_320009700.1;Parent=LTnewLM_320009700 LTnewLM_32 AUGUSTUS CDS 167369 168244 1 - 0 ID=LTnewLM_320009700.1:CDS:1;Parent=LTnewLM_320009700.1 ### LTnewLM_32 . polypeptide 167369 168244 . - . ID=LTnewLM_320009700.1:pep;Derives_from=LTnewLM_320009700.1;orthologous_to=LmjF.32.0440_mRNA;ortholog_cluster=OG0004678;product=term%3DFAM210A/B-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06916 LTnewLM_32 Pfam protein_match 167486 167758 . - . Parent=LTnewLM_320009700.1:pep;Name=PF06916;signature_desc=FAM210A/B-like domain ### LTnewLM_32 AUGUSTUS gene 169381 170175 1 - . ID=LTnewLM_320009800 LTnewLM_32 AUGUSTUS mRNA 169381 170175 1 - . ID=LTnewLM_320009800.1;Parent=LTnewLM_320009800 LTnewLM_32 AUGUSTUS CDS 169381 170175 1 - 0 ID=LTnewLM_320009800.1:CDS:1;Parent=LTnewLM_320009800.1 ### LTnewLM_32 . polypeptide 169381 170175 . - . ID=LTnewLM_320009800.1:pep;Derives_from=LTnewLM_320009800.1;orthologous_to=LTnewLM_190005500.1,LmjF.19.0060_mRNA,LmjF.32.0450_mRNA;ortholog_cluster=OG0000138;product=term%3DRibosomal protein S5%2C N-terminal domain/Ribosomal protein S5%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00333|Pfam:PF03719;Ontology_term=GO:0003723,GO:0006412,GO:0003735,GO:0005840 LTnewLM_32 Pfam protein_match 169450 169665 . - . Parent=LTnewLM_320009800.1:pep;Name=PF03719;signature_desc=Ribosomal protein S5%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_32 Pfam protein_match 169726 169917 . - . Parent=LTnewLM_320009800.1:pep;Name=PF00333;signature_desc=Ribosomal protein S5%2C N-terminal domain;Ontology_term=GO:0003723,GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_32 AUGUSTUS gene 172146 172988 1 - . ID=LTnewLM_320009900 LTnewLM_32 AUGUSTUS mRNA 172146 172988 1 - . ID=LTnewLM_320009900.1;Parent=LTnewLM_320009900 LTnewLM_32 AUGUSTUS CDS 172146 172988 1 - 0 ID=LTnewLM_320009900.1:CDS:1;Parent=LTnewLM_320009900.1 ### LTnewLM_32 . polypeptide 172146 172988 . - . ID=LTnewLM_320009900.1:pep;Derives_from=LTnewLM_320009900.1;orthologous_to=LmjF.32.0460_mRNA;ortholog_cluster=OG0004679;product=term%3DAldo/keto reductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00248 LTnewLM_32 Pfam protein_match 172206 172934 . - . Parent=LTnewLM_320009900.1:pep;Name=PF00248;signature_desc=Aldo/keto reductase family ### LTnewLM_32 Liftoff gene 173975 177139 . - . ID=LTnewLM_320010000;coverage=0.997;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.0470_0 LTnewLM_32 Liftoff mRNA 173975 177139 . - . ID=LTnewLM_320010000.1;Parent=LTnewLM_320010000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 173975 177139 . - 0 ID=LTnewLM_320010000.1:CDS:1;Parent=LTnewLM_320010000.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 173975 177139 . - . ID=LTnewLM_320010000.1:pep;Derives_from=LTnewLM_320010000.1;orthologous_to=LmjF.32.0470_mRNA;ortholog_cluster=OG0004680;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_32 Pfam protein_match 175619 175678 . - . Parent=LTnewLM_320010000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_32 Liftoff gene 178692 179312 . - . ID=LTnewLM_320010100;coverage=1.0;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.0473_0 LTnewLM_32 Liftoff mRNA 178692 179312 . - . ID=LTnewLM_320010100.1;Parent=LTnewLM_320010100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 178692 179312 . - 0 ID=LTnewLM_320010100.1:CDS:1;Parent=LTnewLM_320010100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 178692 179312 . - . ID=LTnewLM_320010100.1:pep;Derives_from=LTnewLM_320010100.1;orthologous_to=LmjF.32.0473_mRNA;ortholog_cluster=OG0004681;product=term%3DRtf2 RING-finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04641 LTnewLM_32 Pfam protein_match 178815 179312 . - . Parent=LTnewLM_320010100.1:pep;Name=PF04641;signature_desc=Rtf2 RING-finger ### LTnewLM_32 AUGUSTUS gene 179818 180123 1 - . ID=LTnewLM_320010200 LTnewLM_32 AUGUSTUS mRNA 179818 180123 1 - . ID=LTnewLM_320010200.1;Parent=LTnewLM_320010200 LTnewLM_32 AUGUSTUS CDS 179818 180123 1 - 0 ID=LTnewLM_320010200.1:CDS:1;Parent=LTnewLM_320010200.1 ### LTnewLM_32 . polypeptide 179818 180123 . - . ID=LTnewLM_320010200.1:pep;Derives_from=LTnewLM_320010200.1;orthologous_to=LmjF.32.0477_mRNA;ortholog_cluster=OG0004682;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 180579 181730 1 - . ID=LTnewLM_320010300 LTnewLM_32 AUGUSTUS mRNA 180579 181730 1 - . ID=LTnewLM_320010300.1;Parent=LTnewLM_320010300 LTnewLM_32 AUGUSTUS CDS 180579 181730 1 - 0 ID=LTnewLM_320010300.1:CDS:1;Parent=LTnewLM_320010300.1 ### LTnewLM_32 . polypeptide 180579 181730 . - . ID=LTnewLM_320010300.1:pep;Derives_from=LTnewLM_320010300.1;orthologous_to=LmjF.32.0480_mRNA;ortholog_cluster=OG0004683;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 183618 184229 1 + . ID=LTnewLM_320010400 LTnewLM_32 AUGUSTUS mRNA 183618 184229 1 + . ID=LTnewLM_320010400.1;Parent=LTnewLM_320010400 LTnewLM_32 AUGUSTUS CDS 183618 184229 1 + 0 ID=LTnewLM_320010400.1:CDS:1;Parent=LTnewLM_320010400.1 ### LTnewLM_32 . polypeptide 183618 184229 . + . ID=LTnewLM_320010400.1:pep;Derives_from=LTnewLM_320010400.1;orthologous_to=LmjF.32.0490_mRNA;ortholog_cluster=OG0004684;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family/50S ribosome-binding GTPase/Elongation factor Tu GTP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071|Pfam:PF01926|Pfam:PF00009;Ontology_term=GO:0007264,GO:0005622,GO:0003924,GO:0005525 LTnewLM_32 Pfam protein_match 183630 184124 . + . Parent=LTnewLM_320010400.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 183645 183986 . + . Parent=LTnewLM_320010400.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_32 Pfam protein_match 183645 184130 . + . Parent=LTnewLM_320010400.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_32 Pfam protein_match 183648 183932 . + . Parent=LTnewLM_320010400.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 183705 184064 . + . Parent=LTnewLM_320010400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_32 AUGUSTUS gene 184829 185611 1 + . ID=LTnewLM_320010500 LTnewLM_32 AUGUSTUS mRNA 184829 185611 1 + . ID=LTnewLM_320010500.1;Parent=LTnewLM_320010500 LTnewLM_32 AUGUSTUS CDS 184829 185611 1 + 0 ID=LTnewLM_320010500.1:CDS:1;Parent=LTnewLM_320010500.1 ### LTnewLM_32 . polypeptide 184829 185611 . + . ID=LTnewLM_320010500.1:pep;Derives_from=LTnewLM_320010500.1;orthologous_to=LmjF.32.0500_mRNA;ortholog_cluster=OG0004685;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 186173 187264 1 + . ID=LTnewLM_320010600 LTnewLM_32 AUGUSTUS mRNA 186173 187264 1 + . ID=LTnewLM_320010600.1;Parent=LTnewLM_320010600 LTnewLM_32 AUGUSTUS CDS 186173 187264 1 + 0 ID=LTnewLM_320010600.1:CDS:1;Parent=LTnewLM_320010600.1 ### LTnewLM_32 . polypeptide 186173 187264 . + . ID=LTnewLM_320010600.1:pep;Derives_from=LTnewLM_320010600.1;orthologous_to=LmjF.09.1020_mRNA,LmjF.32.0510_mRNA;ortholog_cluster=OG0000442;product=term%3DLEM3 (ligand-effect modulator 3) family / CDC50 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03381;Ontology_term=GO:0016020 LTnewLM_32 Pfam protein_match 186392 187237 . + . Parent=LTnewLM_320010600.1:pep;Name=PF03381;signature_desc=LEM3 (ligand-effect modulator 3) family / CDC50 family;Ontology_term=GO:0016020 ### LTnewLM_32 AUGUSTUS gene 188372 188824 1 + . ID=LTnewLM_320010700 LTnewLM_32 AUGUSTUS mRNA 188372 188824 1 + . ID=LTnewLM_320010700.1;Parent=LTnewLM_320010700 LTnewLM_32 AUGUSTUS CDS 188372 188824 1 + 0 ID=LTnewLM_320010700.1:CDS:1;Parent=LTnewLM_320010700.1 ### LTnewLM_32 . polypeptide 188372 188824 . + . ID=LTnewLM_320010700.1:pep;Derives_from=LTnewLM_320010700.1;orthologous_to=LmjF.32.0520_mRNA;ortholog_cluster=OG0004686;product=term%3DProfilin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00235 LTnewLM_32 Pfam protein_match 188372 188818 . + . Parent=LTnewLM_320010700.1:pep;Name=PF00235;signature_desc=Profilin ### LTnewLM_32 AUGUSTUS gene 191594 192031 1 + . ID=LTnewLM_320010800 LTnewLM_32 AUGUSTUS mRNA 191594 192031 1 + . ID=LTnewLM_320010800.1;Parent=LTnewLM_320010800 LTnewLM_32 AUGUSTUS CDS 191594 192031 1 + 0 ID=LTnewLM_320010800.1:CDS:1;Parent=LTnewLM_320010800.1 ### LTnewLM_32 . polypeptide 191594 192031 . + . ID=LTnewLM_320010800.1:pep;Derives_from=LTnewLM_320010800.1;orthologous_to=LmjF.32.0530_mRNA;ortholog_cluster=OG0004687;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 193169 194704 1 + . ID=LTnewLM_320010900 LTnewLM_32 AUGUSTUS mRNA 193169 194704 1 + . ID=LTnewLM_320010900.1;Parent=LTnewLM_320010900 LTnewLM_32 AUGUSTUS CDS 193169 194704 1 + 0 ID=LTnewLM_320010900.1:CDS:1;Parent=LTnewLM_320010900.1 ### LTnewLM_32 . polypeptide 193169 194704 . + . ID=LTnewLM_320010900.1:pep;Derives_from=LTnewLM_320010900.1;orthologous_to=LmjF.32.0540_mRNA;ortholog_cluster=OG0004688;product=term%3DSulfite exporter TauE/SafE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01925;Ontology_term=GO:0016021 LTnewLM_32 Pfam protein_match 193211 193798 . + . Parent=LTnewLM_320010900.1:pep;Name=PF01925;signature_desc=Sulfite exporter TauE/SafE;Ontology_term=GO:0016021 LTnewLM_32 Pfam protein_match 193457 193813 . + . Parent=LTnewLM_320010900.1:pep;Name=PF01925;signature_desc=Sulfite exporter TauE/SafE;Ontology_term=GO:0016021 ### LTnewLM_32 AUGUSTUS gene 197704 198045 1 + . ID=LTnewLM_320011000 LTnewLM_32 AUGUSTUS mRNA 197704 198045 1 + . ID=LTnewLM_320011000.1;Parent=LTnewLM_320011000 LTnewLM_32 AUGUSTUS CDS 197704 198045 1 + 0 ID=LTnewLM_320011000.1:CDS:1;Parent=LTnewLM_320011000.1 ### LTnewLM_32 . polypeptide 197704 198045 . + . ID=LTnewLM_320011000.1:pep;Derives_from=LTnewLM_320011000.1;orthologous_to=LmjF.32.0550_mRNA;ortholog_cluster=OG0004689;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 199010 199546 1 + . ID=LTnewLM_320011100 LTnewLM_32 AUGUSTUS mRNA 199010 199546 1 + . ID=LTnewLM_320011100.1;Parent=LTnewLM_320011100 LTnewLM_32 AUGUSTUS CDS 199010 199546 1 + 0 ID=LTnewLM_320011100.1:CDS:1;Parent=LTnewLM_320011100.1 ### LTnewLM_32 . polypeptide 199010 199546 . + . ID=LTnewLM_320011100.1:pep;Derives_from=LTnewLM_320011100.1;orthologous_to=LmjF.32.0560_mRNA;ortholog_cluster=OG0004690;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 201368 203122 1 + . ID=LTnewLM_320011200 LTnewLM_32 AUGUSTUS mRNA 201368 203122 1 + . ID=LTnewLM_320011200.1;Parent=LTnewLM_320011200 LTnewLM_32 AUGUSTUS CDS 201368 203122 1 + 0 ID=LTnewLM_320011200.1:CDS:1;Parent=LTnewLM_320011200.1 ### LTnewLM_32 . polypeptide 201368 203122 . + . ID=LTnewLM_320011200.1:pep;Derives_from=LTnewLM_320011200.1;orthologous_to=LmjF.32.0570_mRNA;ortholog_cluster=OG0004691;product=term%3DType III restriction enzyme%2C res subunit/DEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524,GO:0016787,GO:0003677 LTnewLM_32 Pfam protein_match 201857 202321 . + . Parent=LTnewLM_320011200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_32 Pfam protein_match 201860 202336 . + . Parent=LTnewLM_320011200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 202469 202777 . + . Parent=LTnewLM_320011200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_32 AUGUSTUS gene 204150 205913 1 + . ID=LTnewLM_320011300 LTnewLM_32 AUGUSTUS mRNA 204150 205913 1 + . ID=LTnewLM_320011300.1;Parent=LTnewLM_320011300 LTnewLM_32 AUGUSTUS CDS 204150 205913 1 + 0 ID=LTnewLM_320011300.1:CDS:1;Parent=LTnewLM_320011300.1 ### LTnewLM_32 . polypeptide 204150 205913 . + . ID=LTnewLM_320011300.1:pep;Derives_from=LTnewLM_320011300.1;orthologous_to=LmjF.32.0580_mRNA;ortholog_cluster=OG0004692;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 206980 207930 1 + . ID=LTnewLM_320011400 LTnewLM_32 AUGUSTUS mRNA 206980 207930 1 + . ID=LTnewLM_320011400.1;Parent=LTnewLM_320011400 LTnewLM_32 AUGUSTUS CDS 206980 207930 1 + 0 ID=LTnewLM_320011400.1:CDS:1;Parent=LTnewLM_320011400.1 ### LTnewLM_32 . polypeptide 206980 207930 . + . ID=LTnewLM_320011400.1:pep;Derives_from=LTnewLM_320011400.1;orthologous_to=LmjF.32.0590_mRNA;ortholog_cluster=OG0004693;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_32 Pfam protein_match 207097 207255 . + . Parent=LTnewLM_320011400.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_32 AUGUSTUS gene 208758 211190 1 + . ID=LTnewLM_320011500 LTnewLM_32 AUGUSTUS mRNA 208758 211190 1 + . ID=LTnewLM_320011500.1;Parent=LTnewLM_320011500 LTnewLM_32 AUGUSTUS CDS 208758 211190 1 + 0 ID=LTnewLM_320011500.1:CDS:1;Parent=LTnewLM_320011500.1 ### LTnewLM_32 . polypeptide 208758 211190 . + . ID=LTnewLM_320011500.1:pep;Derives_from=LTnewLM_320011500.1;orthologous_to=LmjF.32.0600_mRNA;ortholog_cluster=OG0004694;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 212383 213474 1 + . ID=LTnewLM_320011600 LTnewLM_32 AUGUSTUS mRNA 212383 213474 1 + . ID=LTnewLM_320011600.1;Parent=LTnewLM_320011600 LTnewLM_32 AUGUSTUS CDS 212383 213474 1 + 0 ID=LTnewLM_320011600.1:CDS:1;Parent=LTnewLM_320011600.1 ### LTnewLM_32 . polypeptide 212383 213474 . + . ID=LTnewLM_320011600.1:pep;Derives_from=LTnewLM_320011600.1;orthologous_to=LmjF.32.0610_mRNA;ortholog_cluster=OG0004695;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 212398 212487 . + . Parent=LTnewLM_320011600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 214834 215964 1 + . ID=LTnewLM_320011700 LTnewLM_32 AUGUSTUS mRNA 214834 215964 1 + . ID=LTnewLM_320011700.1;Parent=LTnewLM_320011700 LTnewLM_32 AUGUSTUS CDS 214834 215964 1 + 0 ID=LTnewLM_320011700.1:CDS:1;Parent=LTnewLM_320011700.1 ### LTnewLM_32 . polypeptide 214834 215964 . + . ID=LTnewLM_320011700.1:pep;Derives_from=LTnewLM_320011700.1;orthologous_to=LmjF.32.0620_mRNA;ortholog_cluster=OG0004696;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 216562 217349 . + . ID=LTnewLM_320011800;coverage=1.0;sequence_ID=0.950;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.32.0630_0 LTnewLM_32 Liftoff mRNA 216562 217349 . + . ID=LTnewLM_320011800.1;Parent=LTnewLM_320011800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 216562 216587 . + . ID=LTnewLM_320011800:five_prime_UTR;Parent=LTnewLM_320011800.1;extra_copy_number=0 LTnewLM_32 Liftoff CDS 216588 217349 . + 0 ID=LTnewLM_320011800.1:CDS:1;Parent=LTnewLM_320011800.1;extra_copy_number=0 LTnewLM_32 Liftoff mRNA 216615 217349 . + . ID=LTnewLM_320011800.2;Parent=LTnewLM_320011800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 216615 216788 . + . ID=LTnewLM_320011800:five_prime_UTR.1;Parent=LTnewLM_320011800.2;extra_copy_number=0 LTnewLM_32 Liftoff CDS 216789 217349 . + 0 ID=LTnewLM_320011800.2:CDS:1;Parent=LTnewLM_320011800.2;extra_copy_number=0 ### LTnewLM_32 . polypeptide 216588 217349 . + . ID=LTnewLM_320011800.1:pep;Derives_from=LTnewLM_320011800.1;orthologous_to=LmjF.32.0630.1_mRNA;ortholog_cluster=OG0004697;product=term%3DAMMECR1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01871 LTnewLM_32 Pfam protein_match 216813 217310 . + . Parent=LTnewLM_320011800.1:pep;Name=PF01871;signature_desc=AMMECR1 ### LTnewLM_32 . polypeptide 216789 217349 . + . ID=LTnewLM_320011800.2:pep;Derives_from=LTnewLM_320011800.2;orthologous_to=LmjF.32.0630.2_mRNA;ortholog_cluster=OG0004698;product=term%3DAMMECR1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01871 LTnewLM_32 Pfam protein_match 216813 217310 . + . Parent=LTnewLM_320011800.2:pep;Name=PF01871;signature_desc=AMMECR1 ### LTnewLM_32 AUGUSTUS gene 219956 221770 1 + . ID=LTnewLM_320011900 LTnewLM_32 AUGUSTUS mRNA 219956 221770 1 + . ID=LTnewLM_320011900.1;Parent=LTnewLM_320011900 LTnewLM_32 AUGUSTUS CDS 219956 221770 1 + 0 ID=LTnewLM_320011900.1:CDS:1;Parent=LTnewLM_320011900.1 ### LTnewLM_32 . polypeptide 219956 221770 . + . ID=LTnewLM_320011900.1:pep;Derives_from=LTnewLM_320011900.1;orthologous_to=LmjF.32.0640_mRNA;ortholog_cluster=OG0004699;product=term%3DCyclin-dependent kinase inhibitor 3 (CDKN3)/Protein-tyrosine phosphatase/Dual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05706|Pfam:PF00102|Pfam:PF00782;Ontology_term=GO:0004721,GO:0004725,GO:0008138,GO:0006470 LTnewLM_32 Pfam protein_match 220424 220615 . + . Parent=LTnewLM_320011900.1:pep;Name=PF05706;signature_desc=Cyclin-dependent kinase inhibitor 3 (CDKN3);Ontology_term=GO:0004721,GO:0004725 LTnewLM_32 Pfam protein_match 220448 220690 . + . Parent=LTnewLM_320011900.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 LTnewLM_32 Pfam protein_match 220490 220690 . + . Parent=LTnewLM_320011900.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_32 AUGUSTUS gene 223326 224174 1 + . ID=LTnewLM_320012000 LTnewLM_32 AUGUSTUS mRNA 223326 224174 1 + . ID=LTnewLM_320012000.1;Parent=LTnewLM_320012000 LTnewLM_32 AUGUSTUS CDS 223326 224174 1 + 0 ID=LTnewLM_320012000.1:CDS:1;Parent=LTnewLM_320012000.1 ### LTnewLM_32 . polypeptide 223326 224174 . + . ID=LTnewLM_320012000.1:pep;Derives_from=LTnewLM_320012000.1;orthologous_to=LmjF.32.0650_mRNA;ortholog_cluster=OG0004700;product=term%3DAKAP7 2'5' RNA ligase-like domain/2'-5' RNA ligase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10469|Pfam:PF13563 LTnewLM_32 Pfam protein_match 223539 224159 . + . Parent=LTnewLM_320012000.1:pep;Name=PF10469;signature_desc=AKAP7 2'5' RNA ligase-like domain LTnewLM_32 Pfam protein_match 223650 224006 . + . Parent=LTnewLM_320012000.1:pep;Name=PF13563;signature_desc=2'-5' RNA ligase superfamily ### LTnewLM_32 AUGUSTUS gene 225125 225754 1 + . ID=LTnewLM_320012100 LTnewLM_32 AUGUSTUS mRNA 225125 225754 1 + . ID=LTnewLM_320012100.1;Parent=LTnewLM_320012100 LTnewLM_32 AUGUSTUS CDS 225125 225754 1 + 0 ID=LTnewLM_320012100.1:CDS:1;Parent=LTnewLM_320012100.1 ### LTnewLM_32 . polypeptide 225125 225754 . + . ID=LTnewLM_320012100.1:pep;Derives_from=LTnewLM_320012100.1;orthologous_to=LmjF.32.0660_mRNA;ortholog_cluster=OG0004701;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 227068 227976 1 + . ID=LTnewLM_320012200 LTnewLM_32 AUGUSTUS mRNA 227068 227976 1 + . ID=LTnewLM_320012200.1;Parent=LTnewLM_320012200 LTnewLM_32 AUGUSTUS CDS 227068 227976 1 + 0 ID=LTnewLM_320012200.1:CDS:1;Parent=LTnewLM_320012200.1 ### LTnewLM_32 . polypeptide 227068 227976 . + . ID=LTnewLM_320012200.1:pep;Derives_from=LTnewLM_320012200.1;orthologous_to=LmjF.32.0670_mRNA;ortholog_cluster=OG0004702;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 230443 233796 1 + . ID=LTnewLM_320012300 LTnewLM_32 AUGUSTUS mRNA 230443 233796 1 + . ID=LTnewLM_320012300.1;Parent=LTnewLM_320012300 LTnewLM_32 AUGUSTUS CDS 230443 233796 1 + 0 ID=LTnewLM_320012300.1:CDS:1;Parent=LTnewLM_320012300.1 ### LTnewLM_32 . polypeptide 230443 233796 . + . ID=LTnewLM_320012300.1:pep;Derives_from=LTnewLM_320012300.1;orthologous_to=LmjF.32.0680_mRNA;ortholog_cluster=OG0004703;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_32 Pfam protein_match 230470 230904 . + . Parent=LTnewLM_320012300.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_32 Pfam protein_match 230494 231453 . + . Parent=LTnewLM_320012300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_32 AUGUSTUS gene 235501 236181 1 + . ID=LTnewLM_320012400 LTnewLM_32 AUGUSTUS mRNA 235501 236181 1 + . ID=LTnewLM_320012400.1;Parent=LTnewLM_320012400 LTnewLM_32 AUGUSTUS CDS 235501 236181 1 + 0 ID=LTnewLM_320012400.1:CDS:1;Parent=LTnewLM_320012400.1 ### LTnewLM_32 . polypeptide 235501 236181 . + . ID=LTnewLM_320012400.1:pep;Derives_from=LTnewLM_320012400.1;orthologous_to=LmjF.32.0690_mRNA;ortholog_cluster=OG0004704;product=term%3DRibosomal protein S4/S9 N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00163;Ontology_term=GO:0005622,GO:0019843 LTnewLM_32 Pfam protein_match 235651 235950 . + . Parent=LTnewLM_320012400.1:pep;Name=PF00163;signature_desc=Ribosomal protein S4/S9 N-terminal domain;Ontology_term=GO:0019843,GO:0005622 ### LTnewLM_32 AUGUSTUS gene 238193 238753 1 + . ID=LTnewLM_320012500 LTnewLM_32 AUGUSTUS mRNA 238193 238753 1 + . ID=LTnewLM_320012500.1;Parent=LTnewLM_320012500 LTnewLM_32 AUGUSTUS CDS 238193 238753 1 + 0 ID=LTnewLM_320012500.1:CDS:1;Parent=LTnewLM_320012500.1 ### LTnewLM_32 . polypeptide 238193 238753 . + . ID=LTnewLM_320012500.1:pep;Derives_from=LTnewLM_320012500.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 241410 242114 1 + . ID=LTnewLM_320012600 LTnewLM_32 AUGUSTUS mRNA 241410 242114 1 + . ID=LTnewLM_320012600.1;Parent=LTnewLM_320012600 LTnewLM_32 AUGUSTUS CDS 241410 242114 1 + 0 ID=LTnewLM_320012600.1:CDS:1;Parent=LTnewLM_320012600.1 ### LTnewLM_32 . polypeptide 241410 242114 . + . ID=LTnewLM_320012600.1:pep;Derives_from=LTnewLM_320012600.1;orthologous_to=LmjF.32.0700_mRNA;ortholog_cluster=OG0004705;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_32 Pfam protein_match 241479 241844 . + . Parent=LTnewLM_320012600.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_32 AUGUSTUS gene 247694 248584 1 + . ID=LTnewLM_320012700 LTnewLM_32 AUGUSTUS mRNA 247694 248584 1 + . ID=LTnewLM_320012700.1;Parent=LTnewLM_320012700 LTnewLM_32 AUGUSTUS CDS 247694 248584 1 + 0 ID=LTnewLM_320012700.1:CDS:1;Parent=LTnewLM_320012700.1 ### LTnewLM_32 . polypeptide 247694 248584 . + . ID=LTnewLM_320012700.1:pep;Derives_from=LTnewLM_320012700.1;orthologous_to=LmjF.32.0710_mRNA;ortholog_cluster=OG0004706;product=term%3DMut7-C RNAse domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01927 LTnewLM_32 Pfam protein_match 247745 248287 . + . Parent=LTnewLM_320012700.1:pep;Name=PF01927;signature_desc=Mut7-C RNAse domain ### LTnewLM_32 AUGUSTUS gene 249503 249853 1 + . ID=LTnewLM_320012800 LTnewLM_32 AUGUSTUS mRNA 249503 249853 1 + . ID=LTnewLM_320012800.1;Parent=LTnewLM_320012800 LTnewLM_32 AUGUSTUS CDS 249503 249853 1 + 0 ID=LTnewLM_320012800.1:CDS:1;Parent=LTnewLM_320012800.1 ### LTnewLM_32 . polypeptide 249503 249853 . + . ID=LTnewLM_320012800.1:pep;Derives_from=LTnewLM_320012800.1;orthologous_to=LmjF.32.0715_mRNA;ortholog_cluster=OG0004707;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_32 Pfam protein_match 249539 249721 . + . Parent=LTnewLM_320012800.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_32 AUGUSTUS gene 251469 253040 1 + . ID=LTnewLM_320012900 LTnewLM_32 AUGUSTUS mRNA 251469 253040 1 + . ID=LTnewLM_320012900.1;Parent=LTnewLM_320012900 LTnewLM_32 AUGUSTUS CDS 251469 253040 1 + 0 ID=LTnewLM_320012900.1:CDS:1;Parent=LTnewLM_320012900.1 ### LTnewLM_32 . polypeptide 251469 253040 . + . ID=LTnewLM_320012900.1:pep;Derives_from=LTnewLM_320012900.1;orthologous_to=LmjF.32.0720_mRNA;ortholog_cluster=OG0004708;product=term%3DPan3 Pseudokinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18101 LTnewLM_32 Pfam protein_match 252567 252962 . + . Parent=LTnewLM_320012900.1:pep;Name=PF18101;signature_desc=Pan3 Pseudokinase domain ### LTnewLM_32 AUGUSTUS gene 255466 257259 1 + . ID=LTnewLM_320013000 LTnewLM_32 AUGUSTUS mRNA 255466 257259 1 + . ID=LTnewLM_320013000.1;Parent=LTnewLM_320013000 LTnewLM_32 AUGUSTUS CDS 255466 257259 1 + 0 ID=LTnewLM_320013000.1:CDS:1;Parent=LTnewLM_320013000.1 ### LTnewLM_32 . polypeptide 255466 257259 . + . ID=LTnewLM_320013000.1:pep;Derives_from=LTnewLM_320013000.1;orthologous_to=LmjF.32.0730_mRNA;ortholog_cluster=OG0004709;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 255670 255840 . + . Parent=LTnewLM_320013000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 258503 259672 1 + . ID=LTnewLM_320013100 LTnewLM_32 AUGUSTUS mRNA 258503 259672 1 + . ID=LTnewLM_320013100.1;Parent=LTnewLM_320013100 LTnewLM_32 AUGUSTUS CDS 258503 259672 1 + 0 ID=LTnewLM_320013100.1:CDS:1;Parent=LTnewLM_320013100.1 ### LTnewLM_32 . polypeptide 258503 259672 . + . ID=LTnewLM_320013100.1:pep;Derives_from=LTnewLM_320013100.1;orthologous_to=LmjF.32.0740_mRNA;ortholog_cluster=OG0004710;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 260334 261041 1 + . ID=LTnewLM_320013200 LTnewLM_32 AUGUSTUS mRNA 260334 261041 1 + . ID=LTnewLM_320013200.1;Parent=LTnewLM_320013200 LTnewLM_32 AUGUSTUS CDS 260334 261041 1 + 0 ID=LTnewLM_320013200.1:CDS:1;Parent=LTnewLM_320013200.1 ### LTnewLM_32 . polypeptide 260334 261041 . + . ID=LTnewLM_320013200.1:pep;Derives_from=LTnewLM_320013200.1;orthologous_to=LmjF.32.0750_mRNA;ortholog_cluster=OG0004711;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 260550 260684 . + . Parent=LTnewLM_320013200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_32 AUGUSTUS gene 262698 263588 1 + . ID=LTnewLM_320013300 LTnewLM_32 AUGUSTUS mRNA 262698 263588 1 + . ID=LTnewLM_320013300.1;Parent=LTnewLM_320013300 LTnewLM_32 AUGUSTUS CDS 262698 263588 1 + 0 ID=LTnewLM_320013300.1:CDS:1;Parent=LTnewLM_320013300.1 ### LTnewLM_32 . polypeptide 262698 263588 . + . ID=LTnewLM_320013300.1:pep;Derives_from=LTnewLM_320013300.1;orthologous_to=LmjF.32.0760_mRNA;ortholog_cluster=OG0004712;product=term%3DCyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00134 LTnewLM_32 Pfam protein_match 262827 263039 . + . Parent=LTnewLM_320013300.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_32 AUGUSTUS gene 264627 269558 1 + . ID=LTnewLM_320013400 LTnewLM_32 AUGUSTUS mRNA 264627 269558 1 + . ID=LTnewLM_320013400.1;Parent=LTnewLM_320013400 LTnewLM_32 AUGUSTUS CDS 264627 269558 1 + 0 ID=LTnewLM_320013400.1:CDS:1;Parent=LTnewLM_320013400.1 ### LTnewLM_32 . polypeptide 264627 269558 . + . ID=LTnewLM_320013400.1:pep;Derives_from=LTnewLM_320013400.1;orthologous_to=LmjF.32.0770_mRNA;ortholog_cluster=OG0004713;product=term%3DRIC1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07064 LTnewLM_32 Pfam protein_match 267720 268397 . + . Parent=LTnewLM_320013400.1:pep;Name=PF07064;signature_desc=RIC1 ### LTnewLM_32 AUGUSTUS gene 271914 275330 1 + . ID=LTnewLM_320013500 LTnewLM_32 AUGUSTUS mRNA 271914 275330 1 + . ID=LTnewLM_320013500.1;Parent=LTnewLM_320013500 LTnewLM_32 AUGUSTUS CDS 271914 275330 1 + 0 ID=LTnewLM_320013500.1:CDS:1;Parent=LTnewLM_320013500.1 ### LTnewLM_32 . polypeptide 271914 275330 . + . ID=LTnewLM_320013500.1:pep;Derives_from=LTnewLM_320013500.1;orthologous_to=LmjF.32.0780_mRNA;ortholog_cluster=OG0004714;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 274485 275288 . + . Parent=LTnewLM_320013500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 274488 275297 . + . Parent=LTnewLM_320013500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 276892 277389 1 + . ID=LTnewLM_320013600 LTnewLM_32 AUGUSTUS mRNA 276892 277389 1 + . ID=LTnewLM_320013600.1;Parent=LTnewLM_320013600 LTnewLM_32 AUGUSTUS CDS 276892 277389 1 + 0 ID=LTnewLM_320013600.1:CDS:1;Parent=LTnewLM_320013600.1 ### LTnewLM_32 . polypeptide 276892 277389 . + . ID=LTnewLM_320013600.1:pep;Derives_from=LTnewLM_320013600.1;orthologous_to=LmjF.32.0790_mRNA;ortholog_cluster=OG0004715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 279311 280463 0.62 + . ID=LTnewLM_320013700 LTnewLM_32 AUGUSTUS mRNA 279311 280463 0.62 + . ID=LTnewLM_320013700.1;Parent=LTnewLM_320013700 LTnewLM_32 AUGUSTUS CDS 279311 279480 0.63 + 0 ID=LTnewLM_320013700.1:CDS:1;Parent=LTnewLM_320013700.1 LTnewLM_32 AUGUSTUS CDS 280046 280463 0.75 + 1 ID=LTnewLM_320013700.1:CDS:2;Parent=LTnewLM_320013700.1 ### LTnewLM_32 . polypeptide 279311 280463 . + . ID=LTnewLM_320013700.1:pep;Derives_from=LTnewLM_320013700.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 281110 282111 0.62 + . ID=LTnewLM_320013800 LTnewLM_32 AUGUSTUS mRNA 281110 282111 0.62 + . ID=LTnewLM_320013800.1;Parent=LTnewLM_320013800 LTnewLM_32 AUGUSTUS CDS 281110 281354 0.62 + 0 ID=LTnewLM_320013800.1:CDS:1;Parent=LTnewLM_320013800.1 LTnewLM_32 AUGUSTUS CDS 281706 282111 0.62 + 1 ID=LTnewLM_320013800.1:CDS:2;Parent=LTnewLM_320013800.1 ### LTnewLM_32 . polypeptide 281110 282111 . + . ID=LTnewLM_320013800.1:pep;Derives_from=LTnewLM_320013800.1;orthologous_to=LTnewLM_320014000.1,LTnewLM_320014000.2,LmjF.32.0810.1_mRNA,LmjF.32.0810.2_mRNA;ortholog_cluster=OG0000097;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 282863 286315 1 + . ID=LTnewLM_320013900 LTnewLM_32 AUGUSTUS mRNA 282863 286315 1 + . ID=LTnewLM_320013900.1;Parent=LTnewLM_320013900 LTnewLM_32 AUGUSTUS CDS 282863 286315 1 + 0 ID=LTnewLM_320013900.1:CDS:1;Parent=LTnewLM_320013900.1 ### LTnewLM_32 . polypeptide 282863 286315 . + . ID=LTnewLM_320013900.1:pep;Derives_from=LTnewLM_320013900.1;orthologous_to=LmjF.32.0800_mRNA;ortholog_cluster=OG0004716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 287256 295692 . + . ID=LTnewLM_320014000;coverage=0.984;sequence_ID=0.916;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.32.0810_0 LTnewLM_32 Liftoff mRNA 287256 295692 . + . ID=LTnewLM_320014000.1;Parent=LTnewLM_320014000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 287256 291099 . + . ID=LTnewLM_320014000:five_prime_UTR;Parent=LTnewLM_320014000.1;extra_copy_number=0 LTnewLM_32 Liftoff CDS 291100 295692 . + 0 ID=LTnewLM_320014000.1:CDS:1;Parent=LTnewLM_320014000.1;extra_copy_number=0 LTnewLM_32 Liftoff mRNA 292760 295692 . + . ID=LTnewLM_320014000.2;Parent=LTnewLM_320014000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 292760 292950 . + . ID=LTnewLM_320014000:five_prime_UTR.1;Parent=LTnewLM_320014000.2;extra_copy_number=0 LTnewLM_32 Liftoff CDS 292951 295692 . + 0 ID=LTnewLM_320014000.2:CDS:1;Parent=LTnewLM_320014000.2;extra_copy_number=0 ### LTnewLM_32 . polypeptide 291100 295692 . + . ID=LTnewLM_320014000.1:pep;Derives_from=LTnewLM_320014000.1;orthologous_to=LTnewLM_320013800.1,LTnewLM_320014000.2,LmjF.32.0810.1_mRNA,LmjF.32.0810.2_mRNA;ortholog_cluster=OG0000097;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 294907 295671 . + . Parent=LTnewLM_320014000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_32 Pfam protein_match 294907 295680 . + . Parent=LTnewLM_320014000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_32 . polypeptide 292951 295692 . + . ID=LTnewLM_320014000.2:pep;Derives_from=LTnewLM_320014000.2;orthologous_to=LTnewLM_320013800.1,LTnewLM_320014000.1,LmjF.32.0810.1_mRNA,LmjF.32.0810.2_mRNA;ortholog_cluster=OG0000097;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 294907 295671 . + . Parent=LTnewLM_320014000.2:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_32 Pfam protein_match 294907 295680 . + . Parent=LTnewLM_320014000.2:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 304059 304898 1 + . ID=LTnewLM_320014100 LTnewLM_32 AUGUSTUS mRNA 304059 304898 1 + . ID=LTnewLM_320014100.1;Parent=LTnewLM_320014100 LTnewLM_32 AUGUSTUS CDS 304059 304898 1 + 0 ID=LTnewLM_320014100.1:CDS:1;Parent=LTnewLM_320014100.1 ### LTnewLM_32 . polypeptide 304059 304898 . + . ID=LTnewLM_320014100.1:pep;Derives_from=LTnewLM_320014100.1;orthologous_to=LmjF.32.0820_mRNA;ortholog_cluster=OG0004717;product=term%3DCyclin/Cyclin%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613|Pfam:PF00134;Ontology_term=GO:0000079,GO:0019901 LTnewLM_32 Pfam protein_match 304473 304784 . + . Parent=LTnewLM_320014100.1:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 LTnewLM_32 Pfam protein_match 304521 304790 . + . Parent=LTnewLM_320014100.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain ### LTnewLM_32 AUGUSTUS gene 309407 310807 1 + . ID=LTnewLM_320014200 LTnewLM_32 AUGUSTUS mRNA 309407 310807 1 + . ID=LTnewLM_320014200.1;Parent=LTnewLM_320014200 LTnewLM_32 AUGUSTUS CDS 309407 310807 1 + 0 ID=LTnewLM_320014200.1:CDS:1;Parent=LTnewLM_320014200.1 ### LTnewLM_32 . polypeptide 309407 310807 . + . ID=LTnewLM_320014200.1:pep;Derives_from=LTnewLM_320014200.1;orthologous_to=LmjF.32.0830_mRNA;ortholog_cluster=OG0004718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 311966 313501 1 + . ID=LTnewLM_320014300 LTnewLM_32 AUGUSTUS mRNA 311966 313501 1 + . ID=LTnewLM_320014300.1;Parent=LTnewLM_320014300 LTnewLM_32 AUGUSTUS CDS 311966 313501 1 + 0 ID=LTnewLM_320014300.1:CDS:1;Parent=LTnewLM_320014300.1 ### LTnewLM_32 . polypeptide 311966 313501 . + . ID=LTnewLM_320014300.1:pep;Derives_from=LTnewLM_320014300.1;orthologous_to=LmjF.32.0840_mRNA;ortholog_cluster=OG0004719;product=term%3DRRM-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11835 LTnewLM_32 Pfam protein_match 312032 312268 . + . Parent=LTnewLM_320014300.1:pep;Name=PF11835;signature_desc=RRM-like domain ### LTnewLM_32 AUGUSTUS gene 319201 321474 1 + . ID=LTnewLM_320014400 LTnewLM_32 AUGUSTUS mRNA 319201 321474 1 + . ID=LTnewLM_320014400.1;Parent=LTnewLM_320014400 LTnewLM_32 AUGUSTUS CDS 319201 321474 1 + 0 ID=LTnewLM_320014400.1:CDS:1;Parent=LTnewLM_320014400.1 ### LTnewLM_32 . polypeptide 319201 321474 . + . ID=LTnewLM_320014400.1:pep;Derives_from=LTnewLM_320014400.1;orthologous_to=LmjF.32.0850_mRNA;ortholog_cluster=OG0004720;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 320959 321147 . + . Parent=LTnewLM_320014400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_32 AUGUSTUS gene 322375 324081 1 + . ID=LTnewLM_320014500 LTnewLM_32 AUGUSTUS mRNA 322375 324081 1 + . ID=LTnewLM_320014500.1;Parent=LTnewLM_320014500 LTnewLM_32 AUGUSTUS CDS 322375 324081 1 + 0 ID=LTnewLM_320014500.1:CDS:1;Parent=LTnewLM_320014500.1 ### LTnewLM_32 . polypeptide 322375 324081 . + . ID=LTnewLM_320014500.1:pep;Derives_from=LTnewLM_320014500.1;orthologous_to=LmjF.32.0860_mRNA;ortholog_cluster=OG0004721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 327015 328514 1 + . ID=LTnewLM_320014600 LTnewLM_32 AUGUSTUS mRNA 327015 328514 1 + . ID=LTnewLM_320014600.1;Parent=LTnewLM_320014600 LTnewLM_32 AUGUSTUS CDS 327015 328514 1 + 0 ID=LTnewLM_320014600.1:CDS:1;Parent=LTnewLM_320014600.1 ### LTnewLM_32 . polypeptide 327015 328514 . + . ID=LTnewLM_320014600.1:pep;Derives_from=LTnewLM_320014600.1;orthologous_to=LmjF.32.0870_mRNA;ortholog_cluster=OG0004722;product=term%3DPheRS DNA binding domain 1/tRNA synthetases class II core domain (F)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18552|Pfam:PF01409;Ontology_term=GO:0004812,GO:0000049,GO:0005524,GO:0043039,GO:0005737 LTnewLM_32 Pfam protein_match 327030 327167 . + . Parent=LTnewLM_320014600.1:pep;Name=PF18552;signature_desc=PheRS DNA binding domain 1 LTnewLM_32 Pfam protein_match 327648 328487 . + . Parent=LTnewLM_320014600.1:pep;Name=PF01409;signature_desc=tRNA synthetases class II core domain (F);Ontology_term=GO:0000049,GO:0004812,GO:0005524,GO:0043039,GO:0005737 ### LTnewLM_32 AUGUSTUS gene 330448 330987 1 + . ID=LTnewLM_320014700 LTnewLM_32 AUGUSTUS mRNA 330448 330987 1 + . ID=LTnewLM_320014700.1;Parent=LTnewLM_320014700 LTnewLM_32 AUGUSTUS CDS 330448 330987 1 + 0 ID=LTnewLM_320014700.1:CDS:1;Parent=LTnewLM_320014700.1 ### LTnewLM_32 . polypeptide 330448 330987 . + . ID=LTnewLM_320014700.1:pep;Derives_from=LTnewLM_320014700.1;orthologous_to=LTnewLM_350011200.1,LmjF.32.0880_mRNA,LmjF.35.0600_mRNA;ortholog_cluster=OG0000232;product=term%3DRibosomal proteins 50S-L18Ae/60S-L20/60S-L18A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01775;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_32 Pfam protein_match 330463 330831 . + . Parent=LTnewLM_320014700.1:pep;Name=PF01775;signature_desc=Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_32 AUGUSTUS gene 332254 333462 1 + . ID=LTnewLM_320014800 LTnewLM_32 AUGUSTUS mRNA 332254 333462 1 + . ID=LTnewLM_320014800.1;Parent=LTnewLM_320014800 LTnewLM_32 AUGUSTUS CDS 332254 333462 1 + 0 ID=LTnewLM_320014800.1:CDS:1;Parent=LTnewLM_320014800.1 ### LTnewLM_32 . polypeptide 332254 333462 . + . ID=LTnewLM_320014800.1:pep;Derives_from=LTnewLM_320014800.1;orthologous_to=LmjF.32.0890_mRNA;ortholog_cluster=OG0004723;product=term%3DCytidylyltransferase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01467;Ontology_term=GO:0003824,GO:0009058 LTnewLM_32 Pfam protein_match 332416 332781 . + . Parent=LTnewLM_320014800.1:pep;Name=PF01467;signature_desc=Cytidylyltransferase-like;Ontology_term=GO:0003824,GO:0009058 LTnewLM_32 Pfam protein_match 332956 333222 . + . Parent=LTnewLM_320014800.1:pep;Name=PF01467;signature_desc=Cytidylyltransferase-like;Ontology_term=GO:0003824,GO:0009058 ### LTnewLM_32 AUGUSTUS gene 334954 335808 1 + . ID=LTnewLM_320014900 LTnewLM_32 AUGUSTUS mRNA 334954 335808 1 + . ID=LTnewLM_320014900.1;Parent=LTnewLM_320014900 LTnewLM_32 AUGUSTUS CDS 334954 335808 1 + 0 ID=LTnewLM_320014900.1:CDS:1;Parent=LTnewLM_320014900.1 ### LTnewLM_32 . polypeptide 334954 335808 . + . ID=LTnewLM_320014900.1:pep;Derives_from=LTnewLM_320014900.1;orthologous_to=LmjF.32.0900_mRNA;ortholog_cluster=OG0004724;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 336392 337522 1 + . ID=LTnewLM_320015000 LTnewLM_32 AUGUSTUS mRNA 336392 337522 1 + . ID=LTnewLM_320015000.1;Parent=LTnewLM_320015000 LTnewLM_32 AUGUSTUS CDS 336392 337522 1 + 0 ID=LTnewLM_320015000.1:CDS:1;Parent=LTnewLM_320015000.1 ### LTnewLM_32 . polypeptide 336392 337522 . + . ID=LTnewLM_320015000.1:pep;Derives_from=LTnewLM_320015000.1;orthologous_to=LmjF.32.0910_mRNA;ortholog_cluster=OG0004725;product=term%3DAlpha/beta hydrolase family/Serine aminopeptidase%2C S33%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12697|Pfam:PF12146 LTnewLM_32 Pfam protein_match 336542 337408 . + . Parent=LTnewLM_320015000.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_32 Pfam protein_match 336740 336973 . + . Parent=LTnewLM_320015000.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 ### LTnewLM_32 AUGUSTUS gene 339660 342341 1 + . ID=LTnewLM_320015100 LTnewLM_32 AUGUSTUS mRNA 339660 342341 1 + . ID=LTnewLM_320015100.1;Parent=LTnewLM_320015100 LTnewLM_32 AUGUSTUS CDS 339660 342341 1 + 0 ID=LTnewLM_320015100.1:CDS:1;Parent=LTnewLM_320015100.1 ### LTnewLM_32 . polypeptide 339660 342341 . + . ID=LTnewLM_320015100.1:pep;Derives_from=LTnewLM_320015100.1;orthologous_to=LmjF.32.0920_mRNA;ortholog_cluster=OG0004726;product=term%3DV-type ATPase 116kDa subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01496;Ontology_term=GO:0033179,GO:0015991,GO:0015078 LTnewLM_32 Pfam protein_match 339762 342311 . + . Parent=LTnewLM_320015100.1:pep;Name=PF01496;signature_desc=V-type ATPase 116kDa subunit family;Ontology_term=GO:0015078,GO:0015991,GO:0033179 ### LTnewLM_32 AUGUSTUS gene 344367 344732 1 + . ID=LTnewLM_320015200 LTnewLM_32 AUGUSTUS mRNA 344367 344732 1 + . ID=LTnewLM_320015200.1;Parent=LTnewLM_320015200 LTnewLM_32 AUGUSTUS CDS 344367 344732 1 + 0 ID=LTnewLM_320015200.1:CDS:1;Parent=LTnewLM_320015200.1 ### LTnewLM_32 . polypeptide 344367 344732 . + . ID=LTnewLM_320015200.1:pep;Derives_from=LTnewLM_320015200.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 350090 352204 1 + . ID=LTnewLM_320015300 LTnewLM_32 AUGUSTUS mRNA 350090 352204 1 + . ID=LTnewLM_320015300.1;Parent=LTnewLM_320015300 LTnewLM_32 AUGUSTUS CDS 350090 352204 1 + 0 ID=LTnewLM_320015300.1:CDS:1;Parent=LTnewLM_320015300.1 ### LTnewLM_32 . polypeptide 350090 352204 . + . ID=LTnewLM_320015300.1:pep;Derives_from=LTnewLM_320015300.1;orthologous_to=LmjF.32.0930_mRNA;ortholog_cluster=OG0004727;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 353243 356434 1 + . ID=LTnewLM_320015400 LTnewLM_32 AUGUSTUS mRNA 353243 356434 1 + . ID=LTnewLM_320015400.1;Parent=LTnewLM_320015400 LTnewLM_32 AUGUSTUS CDS 353243 356434 1 + 0 ID=LTnewLM_320015400.1:CDS:1;Parent=LTnewLM_320015400.1 ### LTnewLM_32 . polypeptide 353243 356434 . + . ID=LTnewLM_320015400.1:pep;Derives_from=LTnewLM_320015400.1;orthologous_to=LmjF.32.0940_mRNA;ortholog_cluster=OG0004728;product=term%3DCLASP N terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12348 LTnewLM_32 Pfam protein_match 353477 353998 . + . Parent=LTnewLM_320015400.1:pep;Name=PF12348;signature_desc=CLASP N terminal ### LTnewLM_32 AUGUSTUS gene 357450 360254 1 + . ID=LTnewLM_320015500 LTnewLM_32 AUGUSTUS mRNA 357450 360254 1 + . ID=LTnewLM_320015500.1;Parent=LTnewLM_320015500 LTnewLM_32 AUGUSTUS CDS 357450 360254 1 + 0 ID=LTnewLM_320015500.1:CDS:1;Parent=LTnewLM_320015500.1 ### LTnewLM_32 . polypeptide 357450 360254 . + . ID=LTnewLM_320015500.1:pep;Derives_from=LTnewLM_320015500.1;orthologous_to=LmjF.32.0950_mRNA;ortholog_cluster=OG0004729;product=term%3DStaphylococcal nuclease homologue/Tudor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00565|Pfam:PF00567 LTnewLM_32 Pfam protein_match 357537 357872 . + . Parent=LTnewLM_320015500.1:pep;Name=PF00565;signature_desc=Staphylococcal nuclease homologue LTnewLM_32 Pfam protein_match 358095 358340 . + . Parent=LTnewLM_320015500.1:pep;Name=PF00565;signature_desc=Staphylococcal nuclease homologue LTnewLM_32 Pfam protein_match 358608 358958 . + . Parent=LTnewLM_320015500.1:pep;Name=PF00565;signature_desc=Staphylococcal nuclease homologue LTnewLM_32 Pfam protein_match 359160 359468 . + . Parent=LTnewLM_320015500.1:pep;Name=PF00565;signature_desc=Staphylococcal nuclease homologue LTnewLM_32 Pfam protein_match 359577 359921 . + . Parent=LTnewLM_320015500.1:pep;Name=PF00567;signature_desc=Tudor domain ### LTnewLM_32 AUGUSTUS gene 363764 364579 1 + . ID=LTnewLM_320015600 LTnewLM_32 AUGUSTUS mRNA 363764 364579 1 + . ID=LTnewLM_320015600.1;Parent=LTnewLM_320015600 LTnewLM_32 AUGUSTUS CDS 363764 364579 1 + 0 ID=LTnewLM_320015600.1:CDS:1;Parent=LTnewLM_320015600.1 ### LTnewLM_32 . polypeptide 363764 364579 . + . ID=LTnewLM_320015600.1:pep;Derives_from=LTnewLM_320015600.1;orthologous_to=LmjF.32.0960_mRNA;ortholog_cluster=OG0004730;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_32 Pfam protein_match 363782 364231 . + . Parent=LTnewLM_320015600.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_32 AUGUSTUS gene 365601 371267 1 + . ID=LTnewLM_320015700 LTnewLM_32 AUGUSTUS mRNA 365601 371267 1 + . ID=LTnewLM_320015700.1;Parent=LTnewLM_320015700 LTnewLM_32 AUGUSTUS CDS 365601 371267 1 + 0 ID=LTnewLM_320015700.1:CDS:1;Parent=LTnewLM_320015700.1 ### LTnewLM_32 . polypeptide 365601 371267 . + . ID=LTnewLM_320015700.1:pep;Derives_from=LTnewLM_320015700.1;orthologous_to=LmjF.32.0970_mRNA;ortholog_cluster=OG0004731;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_32 Pfam protein_match 366609 366791 . + . Parent=LTnewLM_320015700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_32 AUGUSTUS gene 376693 378372 1 + . ID=LTnewLM_320015800 LTnewLM_32 AUGUSTUS mRNA 376693 378372 1 + . ID=LTnewLM_320015800.1;Parent=LTnewLM_320015800 LTnewLM_32 AUGUSTUS CDS 376693 378372 1 + 0 ID=LTnewLM_320015800.1:CDS:1;Parent=LTnewLM_320015800.1 ### LTnewLM_32 . polypeptide 376693 378372 . + . ID=LTnewLM_320015800.1:pep;Derives_from=LTnewLM_320015800.1;orthologous_to=LmjF.32.0980_mRNA;ortholog_cluster=OG0004732;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 390361 391593 . + . ID=LTnewLM_320015900:pseudogene;coverage=1.0;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.0985_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 390361 391593 . + . ID=LTnewLM_320015900.1;Parent=LTnewLM_320015900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 390361 391593 . + . ID=LTnewLM_320015900.1:pseudogenic_exon:1;Parent=LTnewLM_320015900.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 390361 391593 . + . ID=LTnewLM_320015900.1:pep;Derives_from=LTnewLM_320015900.1;orthologous_to=LmjF.32.0985_mRNA;ortholog_cluster=OG0007620;product=term%3DVps23 core domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09454 LTnewLM_32 Pfam protein_match 391162 391344 . + . Parent=LTnewLM_320015900.1:pep;Name=PF09454;signature_desc=Vps23 core domain ### LTnewLM_32 AUGUSTUS gene 394305 398840 1 + . ID=LTnewLM_320016000 LTnewLM_32 AUGUSTUS mRNA 394305 398840 1 + . ID=LTnewLM_320016000.1;Parent=LTnewLM_320016000 LTnewLM_32 AUGUSTUS CDS 394305 398840 1 + 0 ID=LTnewLM_320016000.1:CDS:1;Parent=LTnewLM_320016000.1 ### LTnewLM_32 . polypeptide 394305 398840 . + . ID=LTnewLM_320016000.1:pep;Derives_from=LTnewLM_320016000.1;orthologous_to=LmjF.32.0990_mRNA;ortholog_cluster=OG0004733;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 397299 397394 . + . Parent=LTnewLM_320016000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 399894 401510 1 + . ID=LTnewLM_320016100 LTnewLM_32 AUGUSTUS mRNA 399894 401510 1 + . ID=LTnewLM_320016100.1;Parent=LTnewLM_320016100 LTnewLM_32 AUGUSTUS CDS 399894 401510 1 + 0 ID=LTnewLM_320016100.1:CDS:1;Parent=LTnewLM_320016100.1 ### LTnewLM_32 . polypeptide 399894 401510 . + . ID=LTnewLM_320016100.1:pep;Derives_from=LTnewLM_320016100.1;orthologous_to=LmjF.32.1000_mRNA;ortholog_cluster=OG0004734;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_32 Pfam protein_match 400011 401483 . + . Parent=LTnewLM_320016100.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_32 AUGUSTUS gene 403115 404386 1 + . ID=LTnewLM_320016200 LTnewLM_32 AUGUSTUS mRNA 403115 404386 1 + . ID=LTnewLM_320016200.1;Parent=LTnewLM_320016200 LTnewLM_32 AUGUSTUS CDS 403115 404386 1 + 0 ID=LTnewLM_320016200.1:CDS:1;Parent=LTnewLM_320016200.1 ### LTnewLM_32 . polypeptide 403115 404386 . + . ID=LTnewLM_320016200.1:pep;Derives_from=LTnewLM_320016200.1;orthologous_to=LmjF.32.1010_mRNA;ortholog_cluster=OG0004735;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03162 LTnewLM_32 Pfam protein_match 403148 403645 . + . Parent=LTnewLM_320016200.1:pep;Name=PF03162;signature_desc=Tyrosine phosphatase family ### LTnewLM_32 AUGUSTUS gene 406266 408701 1 + . ID=LTnewLM_320016300 LTnewLM_32 AUGUSTUS mRNA 406266 408701 1 + . ID=LTnewLM_320016300.1;Parent=LTnewLM_320016300 LTnewLM_32 AUGUSTUS CDS 406266 408701 1 + 0 ID=LTnewLM_320016300.1:CDS:1;Parent=LTnewLM_320016300.1 ### LTnewLM_32 . polypeptide 406266 408701 . + . ID=LTnewLM_320016300.1:pep;Derives_from=LTnewLM_320016300.1;orthologous_to=LmjF.32.1020_mRNA;ortholog_cluster=OG0004736;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 407397 408434 . + . Parent=LTnewLM_320016300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_32 Pfam protein_match 407880 408446 . + . Parent=LTnewLM_320016300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 409482 410147 1 + . ID=LTnewLM_320016400 LTnewLM_32 AUGUSTUS mRNA 409482 410147 1 + . ID=LTnewLM_320016400.1;Parent=LTnewLM_320016400 LTnewLM_32 AUGUSTUS CDS 409482 410147 1 + 0 ID=LTnewLM_320016400.1:CDS:1;Parent=LTnewLM_320016400.1 ### LTnewLM_32 . polypeptide 409482 410147 . + . ID=LTnewLM_320016400.1:pep;Derives_from=LTnewLM_320016400.1;orthologous_to=LmjF.32.1030_mRNA;ortholog_cluster=OG0004737;product=term%3DMaf-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02545;Ontology_term=GO:0005737 LTnewLM_32 Pfam protein_match 409500 410090 . + . Parent=LTnewLM_320016400.1:pep;Name=PF02545;signature_desc=Maf-like protein;Ontology_term=GO:0005737 ### LTnewLM_32 . pseudogene 410793 412666 . + . ID=LTnewLM_320016500:pseudogene;coverage=0.999;sequence_ID=0.891;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1040_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 410793 412666 . + . ID=LTnewLM_320016500.1;Parent=LTnewLM_320016500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 410793 412666 . + . ID=LTnewLM_320016500.1:pseudogenic_exon:1;Parent=LTnewLM_320016500.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 410793 412666 . + . ID=LTnewLM_320016500.1:pep;Derives_from=LTnewLM_320016500.1;orthologous_to=LmjF.32.1040_mRNA;ortholog_cluster=OG0007621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 414432 415046 1 + . ID=LTnewLM_320016600 LTnewLM_32 AUGUSTUS mRNA 414432 415046 1 + . ID=LTnewLM_320016600.1;Parent=LTnewLM_320016600 LTnewLM_32 AUGUSTUS CDS 414432 415046 1 + 0 ID=LTnewLM_320016600.1:CDS:1;Parent=LTnewLM_320016600.1 ### LTnewLM_32 . polypeptide 414432 415046 . + . ID=LTnewLM_320016600.1:pep;Derives_from=LTnewLM_320016600.1;orthologous_to=LmjF.32.1050_mRNA;ortholog_cluster=OG0004738;product=term%3DCalcineurin-like phosphoesterase superfamily domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12850 LTnewLM_32 Pfam protein_match 414444 414905 . + . Parent=LTnewLM_320016600.1:pep;Name=PF12850;signature_desc=Calcineurin-like phosphoesterase superfamily domain ### LTnewLM_32 AUGUSTUS gene 416592 418397 1 + . ID=LTnewLM_320016700 LTnewLM_32 AUGUSTUS mRNA 416592 418397 1 + . ID=LTnewLM_320016700.1;Parent=LTnewLM_320016700 LTnewLM_32 AUGUSTUS CDS 416592 418397 1 + 0 ID=LTnewLM_320016700.1:CDS:1;Parent=LTnewLM_320016700.1 ### LTnewLM_32 . polypeptide 416592 418397 . + . ID=LTnewLM_320016700.1:pep;Derives_from=LTnewLM_320016700.1;orthologous_to=LmjF.32.1060_mRNA;ortholog_cluster=OG0004739;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 417378 417470 . + . Parent=LTnewLM_320016700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 420032 420277 1 + . ID=LTnewLM_320016800 LTnewLM_32 AUGUSTUS mRNA 420032 420277 1 + . ID=LTnewLM_320016800.1;Parent=LTnewLM_320016800 LTnewLM_32 AUGUSTUS CDS 420032 420277 1 + 0 ID=LTnewLM_320016800.1:CDS:1;Parent=LTnewLM_320016800.1 ### LTnewLM_32 . polypeptide 420032 420277 . + . ID=LTnewLM_320016800.1:pep;Derives_from=LTnewLM_320016800.1;orthologous_to=LmjF.32.1070_mRNA;ortholog_cluster=OG0004740;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_32 Pfam protein_match 420059 420259 . + . Parent=LTnewLM_320016800.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_32 AUGUSTUS gene 421509 422075 1 + . ID=LTnewLM_320016900 LTnewLM_32 AUGUSTUS mRNA 421509 422075 1 + . ID=LTnewLM_320016900.1;Parent=LTnewLM_320016900 LTnewLM_32 AUGUSTUS CDS 421509 422075 1 + 0 ID=LTnewLM_320016900.1:CDS:1;Parent=LTnewLM_320016900.1 ### LTnewLM_32 . polypeptide 421509 422075 . + . ID=LTnewLM_320016900.1:pep;Derives_from=LTnewLM_320016900.1;orthologous_to=LmjF.32.1080_mRNA;ortholog_cluster=OG0004741;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 424180 429065 0.98 + . ID=LTnewLM_320017000 LTnewLM_32 AUGUSTUS mRNA 424180 429065 0.98 + . ID=LTnewLM_320017000.1;Parent=LTnewLM_320017000 LTnewLM_32 AUGUSTUS CDS 424180 427899 0.98 + 0 ID=LTnewLM_320017000.1:CDS:1;Parent=LTnewLM_320017000.1 LTnewLM_32 AUGUSTUS CDS 427959 429065 0.98 + 0 ID=LTnewLM_320017000.1:CDS:2;Parent=LTnewLM_320017000.1 ### LTnewLM_32 . polypeptide 424180 429065 . + . ID=LTnewLM_320017000.1:pep;Derives_from=LTnewLM_320017000.1;orthologous_to=LmjF.32.1090_mRNA;ortholog_cluster=OG0004742;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_32 Pfam protein_match 428002 428991 . + . Parent=LTnewLM_320017000.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_32 AUGUSTUS gene 430681 433794 1 + . ID=LTnewLM_320017100 LTnewLM_32 AUGUSTUS mRNA 430681 433794 1 + . ID=LTnewLM_320017100.1;Parent=LTnewLM_320017100 LTnewLM_32 AUGUSTUS CDS 430681 433794 1 + 0 ID=LTnewLM_320017100.1:CDS:1;Parent=LTnewLM_320017100.1 ### LTnewLM_32 . polypeptide 430681 433794 . + . ID=LTnewLM_320017100.1:pep;Derives_from=LTnewLM_320017100.1;orthologous_to=LmjF.32.1100_mRNA;ortholog_cluster=OG0004743;product=term%3DImportin-beta N-terminal domain/Exportin 1-like protein/Chromosome region maintenance or exportin repeat/CRM1 / Exportin repeat 2/CRM1 / Exportin repeat 3/CRM1 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03810|Pfam:PF08389|Pfam:PF18777|Pfam:PF18784|Pfam:PF18787|Pfam:PF08767;Ontology_term=GO:0008536,GO:0006886 LTnewLM_32 Pfam protein_match 430780 430974 . + . Parent=LTnewLM_320017100.1:pep;Name=PF03810;signature_desc=Importin-beta N-terminal domain;Ontology_term=GO:0008536,GO:0006886 LTnewLM_32 Pfam protein_match 431014 431445 . + . Parent=LTnewLM_320017100.1:pep;Name=PF08389;signature_desc=Exportin 1-like protein LTnewLM_32 Pfam protein_match 431704 431793 . + . Parent=LTnewLM_320017100.1:pep;Name=PF18777;signature_desc=Chromosome region maintenance or exportin repeat LTnewLM_32 Pfam protein_match 431857 432039 . + . Parent=LTnewLM_320017100.1:pep;Name=PF18784;signature_desc=CRM1 / Exportin repeat 2 LTnewLM_32 Pfam protein_match 432079 432228 . + . Parent=LTnewLM_320017100.1:pep;Name=PF18787;signature_desc=CRM1 / Exportin repeat 3 LTnewLM_32 Pfam protein_match 432754 433668 . + . Parent=LTnewLM_320017100.1:pep;Name=PF08767;signature_desc=CRM1 C terminal ### LTnewLM_32 AUGUSTUS gene 435073 436170 1 + . ID=LTnewLM_320017200 LTnewLM_32 AUGUSTUS mRNA 435073 436170 1 + . ID=LTnewLM_320017200.1;Parent=LTnewLM_320017200 LTnewLM_32 AUGUSTUS CDS 435073 436170 1 + 0 ID=LTnewLM_320017200.1:CDS:1;Parent=LTnewLM_320017200.1 ### LTnewLM_32 . polypeptide 435073 436170 . + . ID=LTnewLM_320017200.1:pep;Derives_from=LTnewLM_320017200.1;orthologous_to=LmjF.32.1110_mRNA;ortholog_cluster=OG0004744;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_32 Pfam protein_match 435283 435549 . + . Parent=LTnewLM_320017200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 435589 435840 . + . Parent=LTnewLM_320017200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 435877 436146 . + . Parent=LTnewLM_320017200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_32 AUGUSTUS gene 437173 438186 1 + . ID=LTnewLM_320017300 LTnewLM_32 AUGUSTUS mRNA 437173 438186 1 + . ID=LTnewLM_320017300.1;Parent=LTnewLM_320017300 LTnewLM_32 AUGUSTUS CDS 437173 438186 1 + 0 ID=LTnewLM_320017300.1:CDS:1;Parent=LTnewLM_320017300.1 ### LTnewLM_32 . polypeptide 437173 438186 . + . ID=LTnewLM_320017300.1:pep;Derives_from=LTnewLM_320017300.1;orthologous_to=LmjF.32.1120_mRNA;ortholog_cluster=OG0004745;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_32 Pfam protein_match 437206 437469 . + . Parent=LTnewLM_320017300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 437590 437865 . + . Parent=LTnewLM_320017300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_32 Pfam protein_match 437896 438162 . + . Parent=LTnewLM_320017300.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_32 AUGUSTUS gene 439588 444409 0.67 + . ID=LTnewLM_320017400 LTnewLM_32 AUGUSTUS mRNA 439588 444409 0.67 + . ID=LTnewLM_320017400.1;Parent=LTnewLM_320017400 LTnewLM_32 AUGUSTUS CDS 439588 441096 0.75 + 0 ID=LTnewLM_320017400.1:CDS:1;Parent=LTnewLM_320017400.1 LTnewLM_32 AUGUSTUS CDS 441176 444409 0.67 + 0 ID=LTnewLM_320017400.1:CDS:2;Parent=LTnewLM_320017400.1 ### LTnewLM_32 . polypeptide 439588 444409 . + . ID=LTnewLM_320017400.1:pep;Derives_from=LTnewLM_320017400.1;orthologous_to=LmjF.32.1130_mRNA;ortholog_cluster=OG0004746;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 445658 447928 1 + . ID=LTnewLM_320017500 LTnewLM_32 AUGUSTUS mRNA 445658 447928 1 + . ID=LTnewLM_320017500.1;Parent=LTnewLM_320017500 LTnewLM_32 AUGUSTUS CDS 445658 447928 1 + 0 ID=LTnewLM_320017500.1:CDS:1;Parent=LTnewLM_320017500.1 ### LTnewLM_32 . polypeptide 445658 447928 . + . ID=LTnewLM_320017500.1:pep;Derives_from=LTnewLM_320017500.1;orthologous_to=LmjF.32.1140_mRNA;ortholog_cluster=OG0004747;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 449464 450381 1 + . ID=LTnewLM_320017600 LTnewLM_32 AUGUSTUS mRNA 449464 450381 1 + . ID=LTnewLM_320017600.1;Parent=LTnewLM_320017600 LTnewLM_32 AUGUSTUS CDS 449464 450381 1 + 0 ID=LTnewLM_320017600.1:CDS:1;Parent=LTnewLM_320017600.1 ### LTnewLM_32 . polypeptide 449464 450381 . + . ID=LTnewLM_320017600.1:pep;Derives_from=LTnewLM_320017600.1;orthologous_to=LmjF.32.1150_mRNA;ortholog_cluster=OG0004748;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 455139 456284 1 + . ID=LTnewLM_320017700 LTnewLM_32 AUGUSTUS mRNA 455139 456284 1 + . ID=LTnewLM_320017700.1;Parent=LTnewLM_320017700 LTnewLM_32 AUGUSTUS CDS 455139 456284 1 + 0 ID=LTnewLM_320017700.1:CDS:1;Parent=LTnewLM_320017700.1 ### LTnewLM_32 . polypeptide 455139 456284 . + . ID=LTnewLM_320017700.1:pep;Derives_from=LTnewLM_320017700.1;orthologous_to=LmjF.32.1160_mRNA;ortholog_cluster=OG0004749;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_32 Pfam protein_match 455352 456041 . + . Parent=LTnewLM_320017700.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_32 AUGUSTUS gene 458096 459181 1 + . ID=LTnewLM_320017800 LTnewLM_32 AUGUSTUS mRNA 458096 459181 1 + . ID=LTnewLM_320017800.1;Parent=LTnewLM_320017800 LTnewLM_32 AUGUSTUS CDS 458096 459181 1 + 0 ID=LTnewLM_320017800.1:CDS:1;Parent=LTnewLM_320017800.1 ### LTnewLM_32 . polypeptide 458096 459181 . + . ID=LTnewLM_320017800.1:pep;Derives_from=LTnewLM_320017800.1;orthologous_to=LmjF.32.1170_mRNA;ortholog_cluster=OG0004750;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 459946 461928 1 + . ID=LTnewLM_320017900 LTnewLM_32 AUGUSTUS mRNA 459946 461928 1 + . ID=LTnewLM_320017900.1;Parent=LTnewLM_320017900 LTnewLM_32 AUGUSTUS CDS 459946 461928 1 + 0 ID=LTnewLM_320017900.1:CDS:1;Parent=LTnewLM_320017900.1 ### LTnewLM_32 . polypeptide 459946 461928 . + . ID=LTnewLM_320017900.1:pep;Derives_from=LTnewLM_320017900.1;orthologous_to=LmjF.32.1180_mRNA;ortholog_cluster=OG0004751;product=term%3DAnkyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637 LTnewLM_32 Pfam protein_match 460069 460194 . + . Parent=LTnewLM_320017900.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_32 AUGUSTUS gene 463136 464836 1 + . ID=LTnewLM_320018000 LTnewLM_32 AUGUSTUS mRNA 463136 464836 1 + . ID=LTnewLM_320018000.1;Parent=LTnewLM_320018000 LTnewLM_32 AUGUSTUS CDS 463136 464836 1 + 0 ID=LTnewLM_320018000.1:CDS:1;Parent=LTnewLM_320018000.1 ### LTnewLM_32 . polypeptide 463136 464836 . + . ID=LTnewLM_320018000.1:pep;Derives_from=LTnewLM_320018000.1;orthologous_to=LmjF.32.1190_mRNA;ortholog_cluster=OG0004752;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 465570 466394 1 + . ID=LTnewLM_320018100 LTnewLM_32 AUGUSTUS mRNA 465570 466394 1 + . ID=LTnewLM_320018100.1;Parent=LTnewLM_320018100 LTnewLM_32 AUGUSTUS CDS 465570 466394 1 + 0 ID=LTnewLM_320018100.1:CDS:1;Parent=LTnewLM_320018100.1 ### LTnewLM_32 . polypeptide 465570 466394 . + . ID=LTnewLM_320018100.1:pep;Derives_from=LTnewLM_320018100.1;orthologous_to=LmjF.32.1200_mRNA;ortholog_cluster=OG0004753;product=term%3DCSN8/PSMD8/EIF3K family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10075 LTnewLM_32 Pfam protein_match 465912 466304 . + . Parent=LTnewLM_320018100.1:pep;Name=PF10075;signature_desc=CSN8/PSMD8/EIF3K family ### LTnewLM_32 AUGUSTUS gene 467424 469829 1 + . ID=LTnewLM_320018200 LTnewLM_32 AUGUSTUS mRNA 467424 469829 1 + . ID=LTnewLM_320018200.1;Parent=LTnewLM_320018200 LTnewLM_32 AUGUSTUS CDS 467424 469829 1 + 0 ID=LTnewLM_320018200.1:CDS:1;Parent=LTnewLM_320018200.1 ### LTnewLM_32 . polypeptide 467424 469829 . + . ID=LTnewLM_320018200.1:pep;Derives_from=LTnewLM_320018200.1;orthologous_to=LmjF.32.1210_mRNA;ortholog_cluster=OG0004754;product=term%3DPentacotripeptide-repeat region of PRORP/Pentatricopeptide repeat domain/PPR repeat family/PPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17177|Pfam:PF13812|Pfam:PF13041|Pfam:PF12854|Pfam:PF01535 LTnewLM_32 Pfam protein_match 467808 468218 . + . Parent=LTnewLM_320018200.1:pep;Name=PF17177;signature_desc=Pentacotripeptide-repeat region of PRORP LTnewLM_32 Pfam protein_match 467994 468164 . + . Parent=LTnewLM_320018200.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_32 Pfam protein_match 468030 468173 . + . Parent=LTnewLM_320018200.1:pep;Name=PF13041;signature_desc=PPR repeat family LTnewLM_32 Pfam protein_match 468096 468272 . + . Parent=LTnewLM_320018200.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_32 Pfam protein_match 468123 468218 . + . Parent=LTnewLM_320018200.1:pep;Name=PF12854;signature_desc=PPR repeat LTnewLM_32 Pfam protein_match 468132 468272 . + . Parent=LTnewLM_320018200.1:pep;Name=PF13041;signature_desc=PPR repeat family LTnewLM_32 Pfam protein_match 468144 468230 . + . Parent=LTnewLM_320018200.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_32 AUGUSTUS gene 471005 473398 1 + . ID=LTnewLM_320018300 LTnewLM_32 AUGUSTUS mRNA 471005 473398 1 + . ID=LTnewLM_320018300.1;Parent=LTnewLM_320018300 LTnewLM_32 AUGUSTUS CDS 471005 473398 1 + 0 ID=LTnewLM_320018300.1:CDS:1;Parent=LTnewLM_320018300.1 ### LTnewLM_32 . polypeptide 471005 473398 . + . ID=LTnewLM_320018300.1:pep;Derives_from=LTnewLM_320018300.1;orthologous_to=LmjF.32.1220_mRNA;ortholog_cluster=OG0004755;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 474628 475839 1 + . ID=LTnewLM_320018400 LTnewLM_32 AUGUSTUS mRNA 474628 475839 1 + . ID=LTnewLM_320018400.1;Parent=LTnewLM_320018400 LTnewLM_32 AUGUSTUS CDS 474628 475839 1 + 0 ID=LTnewLM_320018400.1:CDS:1;Parent=LTnewLM_320018400.1 ### LTnewLM_32 . polypeptide 474628 475839 . + . ID=LTnewLM_320018400.1:pep;Derives_from=LTnewLM_320018400.1;orthologous_to=LmjF.32.1230_mRNA;ortholog_cluster=OG0004756;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_32 Pfam protein_match 474673 474939 . + . Parent=LTnewLM_320018400.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_32 AUGUSTUS gene 477042 479816 1 + . ID=LTnewLM_320018500 LTnewLM_32 AUGUSTUS mRNA 477042 479816 1 + . ID=LTnewLM_320018500.1;Parent=LTnewLM_320018500 LTnewLM_32 AUGUSTUS CDS 477042 479816 1 + 0 ID=LTnewLM_320018500.1:CDS:1;Parent=LTnewLM_320018500.1 ### LTnewLM_32 . polypeptide 477042 479816 . + . ID=LTnewLM_320018500.1:pep;Derives_from=LTnewLM_320018500.1;orthologous_to=LmjF.32.1240_mRNA;ortholog_cluster=OG0004757;product=term%3DPTHB1 N-terminus/PTHB1 C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14727|Pfam:PF14728 LTnewLM_32 Pfam protein_match 477048 478403 . + . Parent=LTnewLM_320018500.1:pep;Name=PF14727;signature_desc=PTHB1 N-terminus LTnewLM_32 Pfam protein_match 478680 479762 . + . Parent=LTnewLM_320018500.1:pep;Name=PF14728;signature_desc=PTHB1 C-terminus ### LTnewLM_32 AUGUSTUS gene 481087 482707 1.21 + . ID=LTnewLM_320018600 LTnewLM_32 AUGUSTUS mRNA 481087 482707 0.21 + . ID=LTnewLM_320018600.1;Parent=LTnewLM_320018600 LTnewLM_32 AUGUSTUS CDS 481087 481323 0.21 + 0 ID=LTnewLM_320018600.1:CDS:1;Parent=LTnewLM_320018600.1 LTnewLM_32 AUGUSTUS CDS 481421 482707 0.4 + 0 ID=LTnewLM_320018600.1:CDS:2;Parent=LTnewLM_320018600.1 LTnewLM_32 AUGUSTUS mRNA 481457 482707 1 + . ID=LTnewLM_320018600.2;Parent=LTnewLM_320018600 LTnewLM_32 AUGUSTUS CDS 481457 482707 1 + 0 ID=LTnewLM_320018600.2:CDS:1;Parent=LTnewLM_320018600.2 ### LTnewLM_32 . polypeptide 481087 482707 . + . ID=LTnewLM_320018600.1:pep;Derives_from=LTnewLM_320018600.1;orthologous_to=LTnewLM_320018600.2,LmjF.32.1250_mRNA;ortholog_cluster=OG0000443;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_32 Pfam protein_match 481354 482592 . + . Parent=LTnewLM_320018600.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_32 . polypeptide 481457 482707 . + . ID=LTnewLM_320018600.2:pep;Derives_from=LTnewLM_320018600.2;orthologous_to=LTnewLM_320018600.1,LmjF.32.1250_mRNA;ortholog_cluster=OG0000443;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_32 Pfam protein_match 481460 482689 . + . Parent=LTnewLM_320018600.2:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_32 AUGUSTUS gene 483716 485152 1 + . ID=LTnewLM_320018700 LTnewLM_32 AUGUSTUS mRNA 483716 485152 1 + . ID=LTnewLM_320018700.1;Parent=LTnewLM_320018700 LTnewLM_32 AUGUSTUS CDS 483716 485152 1 + 0 ID=LTnewLM_320018700.1:CDS:1;Parent=LTnewLM_320018700.1 ### LTnewLM_32 . polypeptide 483716 485152 . + . ID=LTnewLM_320018700.1:pep;Derives_from=LTnewLM_320018700.1;orthologous_to=LmjF.32.1260_mRNA;ortholog_cluster=OG0004758;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_32 Pfam protein_match 484133 484672 . + . Parent=LTnewLM_320018700.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_32 AUGUSTUS gene 491077 493377 1 + . ID=LTnewLM_320018800 LTnewLM_32 AUGUSTUS mRNA 491077 493377 1 + . ID=LTnewLM_320018800.1;Parent=LTnewLM_320018800 LTnewLM_32 AUGUSTUS CDS 491077 493377 1 + 0 ID=LTnewLM_320018800.1:CDS:1;Parent=LTnewLM_320018800.1 ### LTnewLM_32 . polypeptide 491077 493377 . + . ID=LTnewLM_320018800.1:pep;Derives_from=LTnewLM_320018800.1;orthologous_to=LmjF.32.1270_mRNA;ortholog_cluster=OG0004759;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_32 Pfam protein_match 492238 492864 . + . Parent=LTnewLM_320018800.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_32 AUGUSTUS gene 498047 498646 1 + . ID=LTnewLM_320018900 LTnewLM_32 AUGUSTUS mRNA 498047 498646 1 + . ID=LTnewLM_320018900.1;Parent=LTnewLM_320018900 LTnewLM_32 AUGUSTUS CDS 498047 498646 1 + 0 ID=LTnewLM_320018900.1:CDS:1;Parent=LTnewLM_320018900.1 ### LTnewLM_32 . polypeptide 498047 498646 . + . ID=LTnewLM_320018900.1:pep;Derives_from=LTnewLM_320018900.1;orthologous_to=LmjF.32.1280_mRNA;ortholog_cluster=OG0004760;product=term%3DSHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03876;Ontology_term=GO:0006351,GO:0003899 LTnewLM_32 Pfam protein_match 498068 498289 . + . Parent=LTnewLM_320018900.1:pep;Name=PF03876;signature_desc=SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397;Ontology_term=GO:0003899,GO:0006351 ### LTnewLM_32 AUGUSTUS gene 499233 499517 1 + . ID=LTnewLM_320019000 LTnewLM_32 AUGUSTUS mRNA 499233 499517 1 + . ID=LTnewLM_320019000.1;Parent=LTnewLM_320019000 LTnewLM_32 AUGUSTUS CDS 499233 499517 1 + 0 ID=LTnewLM_320019000.1:CDS:1;Parent=LTnewLM_320019000.1 ### LTnewLM_32 . polypeptide 499233 499517 . + . ID=LTnewLM_320019000.1:pep;Derives_from=LTnewLM_320019000.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 501913 503610 1 + . ID=LTnewLM_320019100 LTnewLM_32 AUGUSTUS mRNA 501913 503610 1 + . ID=LTnewLM_320019100.1;Parent=LTnewLM_320019100 LTnewLM_32 AUGUSTUS CDS 501913 503610 1 + 0 ID=LTnewLM_320019100.1:CDS:1;Parent=LTnewLM_320019100.1 ### LTnewLM_32 . polypeptide 501913 503610 . + . ID=LTnewLM_320019100.1:pep;Derives_from=LTnewLM_320019100.1;orthologous_to=LmjF.32.1290_mRNA;ortholog_cluster=OG0004761;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 502975 503301 . + . Parent=LTnewLM_320019100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 503047 503280 . + . Parent=LTnewLM_320019100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 506301 507116 1 + . ID=LTnewLM_320019200 LTnewLM_32 AUGUSTUS mRNA 506301 507116 1 + . ID=LTnewLM_320019200.1;Parent=LTnewLM_320019200 LTnewLM_32 AUGUSTUS CDS 506301 507116 1 + 0 ID=LTnewLM_320019200.1:CDS:1;Parent=LTnewLM_320019200.1 ### LTnewLM_32 . polypeptide 506301 507116 . + . ID=LTnewLM_320019200.1:pep;Derives_from=LTnewLM_320019200.1;orthologous_to=LmjF.32.1300_mRNA;ortholog_cluster=OG0004762;product=term%3DPolypeptide deformylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01327 LTnewLM_32 Pfam protein_match 506451 506906 . + . Parent=LTnewLM_320019200.1:pep;Name=PF01327;signature_desc=Polypeptide deformylase ### LTnewLM_32 AUGUSTUS gene 507917 509155 1 + . ID=LTnewLM_320019300 LTnewLM_32 AUGUSTUS mRNA 507917 509155 1 + . ID=LTnewLM_320019300.1;Parent=LTnewLM_320019300 LTnewLM_32 AUGUSTUS CDS 507917 509155 1 + 0 ID=LTnewLM_320019300.1:CDS:1;Parent=LTnewLM_320019300.1 ### LTnewLM_32 . polypeptide 507917 509155 . + . ID=LTnewLM_320019300.1:pep;Derives_from=LTnewLM_320019300.1;orthologous_to=LmjF.32.1310_mRNA;ortholog_cluster=OG0004763;product=term%3DWLM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08325 LTnewLM_32 Pfam protein_match 507974 508705 . + . Parent=LTnewLM_320019300.1:pep;Name=PF08325;signature_desc=WLM domain ### LTnewLM_32 AUGUSTUS gene 509839 511470 1 + . ID=LTnewLM_320019400 LTnewLM_32 AUGUSTUS mRNA 509839 511470 1 + . ID=LTnewLM_320019400.1;Parent=LTnewLM_320019400 LTnewLM_32 AUGUSTUS CDS 509839 511470 1 + 0 ID=LTnewLM_320019400.1:CDS:1;Parent=LTnewLM_320019400.1 ### LTnewLM_32 . polypeptide 509839 511470 . + . ID=LTnewLM_320019400.1:pep;Derives_from=LTnewLM_320019400.1;orthologous_to=LmjF.32.1320_mRNA;ortholog_cluster=OG0004764;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 512721 514613 1 + . ID=LTnewLM_320019500 LTnewLM_32 AUGUSTUS mRNA 512721 514613 1 + . ID=LTnewLM_320019500.1;Parent=LTnewLM_320019500 LTnewLM_32 AUGUSTUS CDS 512721 514613 1 + 0 ID=LTnewLM_320019500.1:CDS:1;Parent=LTnewLM_320019500.1 ### LTnewLM_32 . polypeptide 512721 514613 . + . ID=LTnewLM_320019500.1:pep;Derives_from=LTnewLM_320019500.1;orthologous_to=LmjF.32.1330_mRNA;ortholog_cluster=OG0004765;product=term%3DPPPDE putative peptidase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05903 LTnewLM_32 Pfam protein_match 513201 513608 . + . Parent=LTnewLM_320019500.1:pep;Name=PF05903;signature_desc=PPPDE putative peptidase domain ### LTnewLM_32 AUGUSTUS gene 516158 520786 1 + . ID=LTnewLM_320019600 LTnewLM_32 AUGUSTUS mRNA 516158 520786 1 + . ID=LTnewLM_320019600.1;Parent=LTnewLM_320019600 LTnewLM_32 AUGUSTUS CDS 516158 520786 1 + 0 ID=LTnewLM_320019600.1:CDS:1;Parent=LTnewLM_320019600.1 ### LTnewLM_32 . polypeptide 516158 520786 . + . ID=LTnewLM_320019600.1:pep;Derives_from=LTnewLM_320019600.1;orthologous_to=LmjF.32.1340_mRNA;ortholog_cluster=OG0004766;product=term%3DMono-functional DNA-alkylating methyl methanesulfonate N-term/CPSF A subunit region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10433|Pfam:PF03178;Ontology_term=GO:0003676,GO:0005634 LTnewLM_32 Pfam protein_match 517079 518572 . + . Parent=LTnewLM_320019600.1:pep;Name=PF10433;signature_desc=Mono-functional DNA-alkylating methyl methanesulfonate N-term LTnewLM_32 Pfam protein_match 519680 520672 . + . Parent=LTnewLM_320019600.1:pep;Name=PF03178;signature_desc=CPSF A subunit region;Ontology_term=GO:0003676,GO:0005634 ### LTnewLM_32 AUGUSTUS gene 521563 523041 1 + . ID=LTnewLM_320019700 LTnewLM_32 AUGUSTUS mRNA 521563 523041 1 + . ID=LTnewLM_320019700.1;Parent=LTnewLM_320019700 LTnewLM_32 AUGUSTUS CDS 521563 523041 1 + 0 ID=LTnewLM_320019700.1:CDS:1;Parent=LTnewLM_320019700.1 ### LTnewLM_32 . polypeptide 521563 523041 . + . ID=LTnewLM_320019700.1:pep;Derives_from=LTnewLM_320019700.1;orthologous_to=LmjF.32.1350_mRNA;ortholog_cluster=OG0004767;product=term%3DLicD family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04991 LTnewLM_32 Pfam protein_match 522367 522474 . + . Parent=LTnewLM_320019700.1:pep;Name=PF04991;signature_desc=LicD family ### LTnewLM_32 AUGUSTUS gene 525845 529153 1 + . ID=LTnewLM_320019800 LTnewLM_32 AUGUSTUS mRNA 525845 529153 1 + . ID=LTnewLM_320019800.1;Parent=LTnewLM_320019800 LTnewLM_32 AUGUSTUS CDS 525845 529153 1 + 0 ID=LTnewLM_320019800.1:CDS:1;Parent=LTnewLM_320019800.1 ### LTnewLM_32 . polypeptide 525845 529153 . + . ID=LTnewLM_320019800.1:pep;Derives_from=LTnewLM_320019800.1;orthologous_to=LmjF.32.1360_mRNA;ortholog_cluster=OG0004768;product=term%3DAdenylate kinase/mRNA capping enzyme%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00406|Pfam:PF01331;Ontology_term=GO:0006370,GO:0004484,GO:0006397 LTnewLM_32 Pfam protein_match 527510 527635 . + . Parent=LTnewLM_320019800.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_32 Pfam protein_match 528227 528757 . + . Parent=LTnewLM_320019800.1:pep;Name=PF01331;signature_desc=mRNA capping enzyme%2C catalytic domain;Ontology_term=GO:0004484,GO:0006370,GO:0006397 ### LTnewLM_32 AUGUSTUS gene 532746 535118 1 + . ID=LTnewLM_320019900 LTnewLM_32 AUGUSTUS mRNA 532746 535118 1 + . ID=LTnewLM_320019900.1;Parent=LTnewLM_320019900 LTnewLM_32 AUGUSTUS CDS 532746 535118 1 + 0 ID=LTnewLM_320019900.1:CDS:1;Parent=LTnewLM_320019900.1 ### LTnewLM_32 . polypeptide 532746 535118 . + . ID=LTnewLM_320019900.1:pep;Derives_from=LTnewLM_320019900.1;orthologous_to=LmjF.32.1370_mRNA;ortholog_cluster=OG0004769;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 539304 540362 1 - . ID=LTnewLM_320020000 LTnewLM_32 AUGUSTUS mRNA 539304 540362 1 - . ID=LTnewLM_320020000.1;Parent=LTnewLM_320020000 LTnewLM_32 AUGUSTUS CDS 539304 539729 1 - 0 ID=LTnewLM_320020000.1:CDS:1;Parent=LTnewLM_320020000.1 LTnewLM_32 AUGUSTUS CDS 539820 540362 1 - 0 ID=LTnewLM_320020000.1:CDS:2;Parent=LTnewLM_320020000.1 ### LTnewLM_32 . polypeptide 539304 540362 . - . ID=LTnewLM_320020000.1:pep;Derives_from=LTnewLM_320020000.1;orthologous_to=LmjF.32.1380_mRNA;ortholog_cluster=OG0004770;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 542126 544378 1 - . ID=LTnewLM_320020100 LTnewLM_32 AUGUSTUS mRNA 542126 544378 1 - . ID=LTnewLM_320020100.1;Parent=LTnewLM_320020100 LTnewLM_32 AUGUSTUS CDS 542126 544378 1 - 0 ID=LTnewLM_320020100.1:CDS:1;Parent=LTnewLM_320020100.1 ### LTnewLM_32 . polypeptide 542126 544378 . - . ID=LTnewLM_320020100.1:pep;Derives_from=LTnewLM_320020100.1;orthologous_to=LmjF.32.1390_mRNA;ortholog_cluster=OG0004771;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 545917 550986 1 - . ID=LTnewLM_320020200 LTnewLM_32 AUGUSTUS mRNA 545917 550986 1 - . ID=LTnewLM_320020200.1;Parent=LTnewLM_320020200 LTnewLM_32 AUGUSTUS CDS 545917 550986 1 - 0 ID=LTnewLM_320020200.1:CDS:1;Parent=LTnewLM_320020200.1 ### LTnewLM_32 . polypeptide 545917 550986 . - . ID=LTnewLM_320020200.1:pep;Derives_from=LTnewLM_320020200.1;orthologous_to=LmjF.32.1400_mRNA;ortholog_cluster=OG0004772;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain/Sec63 Brl domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271|Pfam:PF02889;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 548281 548859 . - . Parent=LTnewLM_320020200.1:pep;Name=PF02889;signature_desc=Sec63 Brl domain LTnewLM_32 Pfam protein_match 549631 549885 . - . Parent=LTnewLM_320020200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_32 Pfam protein_match 550237 550923 . - . Parent=LTnewLM_320020200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 550336 550908 . - . Parent=LTnewLM_320020200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_32 AUGUSTUS gene 551719 552951 1 - . ID=LTnewLM_320020300 LTnewLM_32 AUGUSTUS mRNA 551719 552951 1 - . ID=LTnewLM_320020300.1;Parent=LTnewLM_320020300 LTnewLM_32 AUGUSTUS CDS 551719 552951 1 - 0 ID=LTnewLM_320020300.1:CDS:1;Parent=LTnewLM_320020300.1 ### LTnewLM_32 . polypeptide 551719 552951 . - . ID=LTnewLM_320020300.1:pep;Derives_from=LTnewLM_320020300.1;orthologous_to=LmjF.32.1410_mRNA;ortholog_cluster=OG0004773;product=term%3DPutative cyclase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04199;Ontology_term=GO:0019441,GO:0004061 LTnewLM_32 Pfam protein_match 551953 552516 . - . Parent=LTnewLM_320020300.1:pep;Name=PF04199;signature_desc=Putative cyclase;Ontology_term=GO:0004061,GO:0019441 ### LTnewLM_32 AUGUSTUS gene 553626 555698 1 - . ID=LTnewLM_320020400 LTnewLM_32 AUGUSTUS mRNA 553626 555698 1 - . ID=LTnewLM_320020400.1;Parent=LTnewLM_320020400 LTnewLM_32 AUGUSTUS CDS 553626 555698 1 - 0 ID=LTnewLM_320020400.1:CDS:1;Parent=LTnewLM_320020400.1 ### LTnewLM_32 . polypeptide 553626 555698 . - . ID=LTnewLM_320020400.1:pep;Derives_from=LTnewLM_320020400.1;orthologous_to=LmjF.32.1420_mRNA;ortholog_cluster=OG0004774;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 557626 561414 . - . ID=LTnewLM_320020500;coverage=0.999;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.1430_0 LTnewLM_32 Liftoff mRNA 557626 561414 . - . ID=LTnewLM_320020500.1;Parent=LTnewLM_320020500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 557626 561414 . - 0 ID=LTnewLM_320020500.1:CDS:1;Parent=LTnewLM_320020500.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 557626 561414 . - . ID=LTnewLM_320020500.1:pep;Derives_from=LTnewLM_320020500.1;orthologous_to=LmjF.32.1430_mRNA;ortholog_cluster=OG0004775;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 562843 563286 1 - . ID=LTnewLM_320020600 LTnewLM_32 AUGUSTUS mRNA 562843 563286 1 - . ID=LTnewLM_320020600.1;Parent=LTnewLM_320020600 LTnewLM_32 AUGUSTUS CDS 562843 563286 1 - 0 ID=LTnewLM_320020600.1:CDS:1;Parent=LTnewLM_320020600.1 ### LTnewLM_32 . polypeptide 562843 563286 . - . ID=LTnewLM_320020600.1:pep;Derives_from=LTnewLM_320020600.1;orthologous_to=LmjF.32.1440_mRNA;ortholog_cluster=OG0004776;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 564093 564578 1 - . ID=LTnewLM_320020700 LTnewLM_32 AUGUSTUS mRNA 564093 564578 1 - . ID=LTnewLM_320020700.1;Parent=LTnewLM_320020700 LTnewLM_32 AUGUSTUS CDS 564093 564578 1 - 0 ID=LTnewLM_320020700.1:CDS:1;Parent=LTnewLM_320020700.1 ### LTnewLM_32 . polypeptide 564093 564578 . - . ID=LTnewLM_320020700.1:pep;Derives_from=LTnewLM_320020700.1;orthologous_to=LmjF.32.1450_mRNA;ortholog_cluster=OG0004777;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 565436 575071 1 - . ID=LTnewLM_320020800 LTnewLM_32 AUGUSTUS mRNA 565436 575071 1 - . ID=LTnewLM_320020800.1;Parent=LTnewLM_320020800 LTnewLM_32 AUGUSTUS CDS 565436 575071 1 - 0 ID=LTnewLM_320020800.1:CDS:1;Parent=LTnewLM_320020800.1 ### LTnewLM_32 . polypeptide 565436 575071 . - . ID=LTnewLM_320020800.1:pep;Derives_from=LTnewLM_320020800.1;orthologous_to=LmjF.32.1460_mRNA;ortholog_cluster=OG0004778;product=term%3DFAT domain/Phosphatidylinositol 3- and 4-kinase/FATC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02259|Pfam:PF00454|Pfam:PF02260;Ontology_term=GO:0016773,GO:0005515 LTnewLM_32 Pfam protein_match 565445 565531 . - . Parent=LTnewLM_320020800.1:pep;Name=PF02260;signature_desc=FATC domain;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 565655 566386 . - . Parent=LTnewLM_320020800.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_32 Pfam protein_match 567065 567805 . - . Parent=LTnewLM_320020800.1:pep;Name=PF02259;signature_desc=FAT domain;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 577022 577861 1 - . ID=LTnewLM_320020900 LTnewLM_32 AUGUSTUS mRNA 577022 577861 1 - . ID=LTnewLM_320020900.1;Parent=LTnewLM_320020900 LTnewLM_32 AUGUSTUS CDS 577022 577861 1 - 0 ID=LTnewLM_320020900.1:CDS:1;Parent=LTnewLM_320020900.1 ### LTnewLM_32 . polypeptide 577022 577861 . - . ID=LTnewLM_320020900.1:pep;Derives_from=LTnewLM_320020900.1;orthologous_to=LmjF.32.1470_mRNA;ortholog_cluster=OG0004779;product=term%3DMicrotubule-binding protein MIP-T3 CH-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10243 LTnewLM_32 Pfam protein_match 577520 577840 . - . Parent=LTnewLM_320020900.1:pep;Name=PF10243;signature_desc=Microtubule-binding protein MIP-T3 CH-like domain ### LTnewLM_32 AUGUSTUS gene 579048 581021 1 - . ID=LTnewLM_320021000 LTnewLM_32 AUGUSTUS mRNA 579048 581021 1 - . ID=LTnewLM_320021000.1;Parent=LTnewLM_320021000 LTnewLM_32 AUGUSTUS CDS 579048 581021 1 - 0 ID=LTnewLM_320021000.1:CDS:1;Parent=LTnewLM_320021000.1 ### LTnewLM_32 . polypeptide 579048 581021 . - . ID=LTnewLM_320021000.1:pep;Derives_from=LTnewLM_320021000.1;orthologous_to=LmjF.32.1480_mRNA;ortholog_cluster=OG0004780;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 584812 585384 1 - . ID=LTnewLM_320021100 LTnewLM_32 AUGUSTUS mRNA 584812 585384 1 - . ID=LTnewLM_320021100.1;Parent=LTnewLM_320021100 LTnewLM_32 AUGUSTUS CDS 584812 585384 1 - 0 ID=LTnewLM_320021100.1:CDS:1;Parent=LTnewLM_320021100.1 ### LTnewLM_32 . polypeptide 584812 585384 . - . ID=LTnewLM_320021100.1:pep;Derives_from=LTnewLM_320021100.1;orthologous_to=LmjF.32.1490_mRNA;ortholog_cluster=OG0004781;product=term%3DrRNA processing%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08524 LTnewLM_32 Pfam protein_match 584821 585285 . - . Parent=LTnewLM_320021100.1:pep;Name=PF08524;signature_desc=rRNA processing ### LTnewLM_32 AUGUSTUS gene 586173 587300 1 - . ID=LTnewLM_320021200 LTnewLM_32 AUGUSTUS mRNA 586173 587300 1 - . ID=LTnewLM_320021200.1;Parent=LTnewLM_320021200 LTnewLM_32 AUGUSTUS CDS 586173 587300 1 - 0 ID=LTnewLM_320021200.1:CDS:1;Parent=LTnewLM_320021200.1 ### LTnewLM_32 . polypeptide 586173 587300 . - . ID=LTnewLM_320021200.1:pep;Derives_from=LTnewLM_320021200.1;orthologous_to=LmjF.32.1495_mRNA;ortholog_cluster=OG0004782;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 588929 591061 1 - . ID=LTnewLM_320021300 LTnewLM_32 AUGUSTUS mRNA 588929 591061 1 - . ID=LTnewLM_320021300.1;Parent=LTnewLM_320021300 LTnewLM_32 AUGUSTUS CDS 588929 591061 1 - 0 ID=LTnewLM_320021300.1:CDS:1;Parent=LTnewLM_320021300.1 ### LTnewLM_32 . polypeptide 588929 591061 . - . ID=LTnewLM_320021300.1:pep;Derives_from=LTnewLM_320021300.1;orthologous_to=LmjF.32.1500_mRNA;ortholog_cluster=OG0004783;product=term%3DATPase family associated with various cellular activities (AAA)/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF01434;Ontology_term=GO:0004222,GO:0006508,GO:0005524 LTnewLM_32 Pfam protein_match 588962 589507 . - . Parent=LTnewLM_320021300.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 LTnewLM_32 Pfam protein_match 589943 590344 . - . Parent=LTnewLM_320021300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_32 AUGUSTUS gene 595750 598395 1 - . ID=LTnewLM_320021400 LTnewLM_32 AUGUSTUS mRNA 595750 598395 1 - . ID=LTnewLM_320021400.1;Parent=LTnewLM_320021400 LTnewLM_32 AUGUSTUS CDS 595750 598395 1 - 0 ID=LTnewLM_320021400.1:CDS:1;Parent=LTnewLM_320021400.1 ### LTnewLM_32 . polypeptide 595750 598395 . - . ID=LTnewLM_320021400.1:pep;Derives_from=LTnewLM_320021400.1;orthologous_to=LmjF.32.1510_mRNA;ortholog_cluster=OG0004784;product=term%3DYqaJ-like viral recombinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09588 LTnewLM_32 Pfam protein_match 597598 598371 . - . Parent=LTnewLM_320021400.1:pep;Name=PF09588;signature_desc=YqaJ-like viral recombinase domain ### LTnewLM_32 AUGUSTUS gene 599786 601549 0.96 - . ID=LTnewLM_320021500 LTnewLM_32 AUGUSTUS mRNA 599786 601549 0.96 - . ID=LTnewLM_320021500.1;Parent=LTnewLM_320021500 LTnewLM_32 AUGUSTUS CDS 599786 601549 0.96 - 0 ID=LTnewLM_320021500.1:CDS:1;Parent=LTnewLM_320021500.1 ### LTnewLM_32 . polypeptide 599786 601549 . - . ID=LTnewLM_320021500.1:pep;Derives_from=LTnewLM_320021500.1;orthologous_to=LmjF.32.1520_mRNA;ortholog_cluster=OG0004785;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 602236 603198 . - . ID=LTnewLM_320021600:pseudogene;coverage=1.0;sequence_ID=0.897;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1530_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 602236 603198 . - . ID=LTnewLM_320021600.1;Parent=LTnewLM_320021600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 602236 603198 . - . ID=LTnewLM_320021600.1:pseudogenic_exon:1;Parent=LTnewLM_320021600.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 602236 603198 . - . ID=LTnewLM_320021600.1:pep;Derives_from=LTnewLM_320021600.1;orthologous_to=LmjF.32.1530_mRNA;ortholog_cluster=OG0007622;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_32 Pfam protein_match 602599 602850 . - . Parent=LTnewLM_320021600.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_32 AUGUSTUS gene 604261 604995 1 - . ID=LTnewLM_320021700 LTnewLM_32 AUGUSTUS mRNA 604261 604995 1 - . ID=LTnewLM_320021700.1;Parent=LTnewLM_320021700 LTnewLM_32 AUGUSTUS CDS 604261 604995 1 - 0 ID=LTnewLM_320021700.1:CDS:1;Parent=LTnewLM_320021700.1 ### LTnewLM_32 . polypeptide 604261 604995 . - . ID=LTnewLM_320021700.1:pep;Derives_from=LTnewLM_320021700.1;orthologous_to=LmjF.32.1540_mRNA;ortholog_cluster=OG0004786;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_32 Pfam protein_match 604690 604887 . - . Parent=LTnewLM_320021700.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_32 AUGUSTUS gene 609050 610387 1 - . ID=LTnewLM_320021800 LTnewLM_32 AUGUSTUS mRNA 609050 610387 1 - . ID=LTnewLM_320021800.1;Parent=LTnewLM_320021800 LTnewLM_32 AUGUSTUS CDS 609050 610387 1 - 0 ID=LTnewLM_320021800.1:CDS:1;Parent=LTnewLM_320021800.1 ### LTnewLM_32 . polypeptide 609050 610387 . - . ID=LTnewLM_320021800.1:pep;Derives_from=LTnewLM_320021800.1;orthologous_to=LmjF.32.1550_mRNA;ortholog_cluster=OG0004787;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_32 Pfam protein_match 609158 609406 . - . Parent=LTnewLM_320021800.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_32 AUGUSTUS gene 611372 614128 1 - . ID=LTnewLM_320021900 LTnewLM_32 AUGUSTUS mRNA 611372 614128 1 - . ID=LTnewLM_320021900.1;Parent=LTnewLM_320021900 LTnewLM_32 AUGUSTUS CDS 611372 614128 1 - 0 ID=LTnewLM_320021900.1:CDS:1;Parent=LTnewLM_320021900.1 ### LTnewLM_32 . polypeptide 611372 614128 . - . ID=LTnewLM_320021900.1:pep;Derives_from=LTnewLM_320021900.1;orthologous_to=LmjF.32.1560_mRNA;ortholog_cluster=OG0004788;product=term%3DClustered mitochondria/Translation initiation factor eIF3 subunit 135%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13236|Pfam:PF12807 LTnewLM_32 Pfam protein_match 611918 612142 . - . Parent=LTnewLM_320021900.1:pep;Name=PF12807;signature_desc=Translation initiation factor eIF3 subunit 135 LTnewLM_32 Pfam protein_match 612725 613333 . - . Parent=LTnewLM_320021900.1:pep;Name=PF13236;signature_desc=Clustered mitochondria ### LTnewLM_32 . pseudogene 615117 617475 . - . ID=LTnewLM_320022000:pseudogene;coverage=0.999;sequence_ID=0.880;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1570_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 615117 617475 . - . ID=LTnewLM_320022000.1;Parent=LTnewLM_320022000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 615117 617475 . - . ID=LTnewLM_320022000.1:pseudogenic_exon:1;Parent=LTnewLM_320022000.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 615117 617475 . - . ID=LTnewLM_320022000.1:pep;Derives_from=LTnewLM_320022000.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 620079 621344 1 - . ID=LTnewLM_320022100 LTnewLM_32 AUGUSTUS mRNA 620079 621344 1 - . ID=LTnewLM_320022100.1;Parent=LTnewLM_320022100 LTnewLM_32 AUGUSTUS CDS 620079 621344 1 - 0 ID=LTnewLM_320022100.1:CDS:1;Parent=LTnewLM_320022100.1 ### LTnewLM_32 . polypeptide 620079 621344 . - . ID=LTnewLM_320022100.1:pep;Derives_from=LTnewLM_320022100.1;orthologous_to=LmjF.32.1580_mRNA;ortholog_cluster=OG0004789;product=term%3DPhosphomannose isomerase type I%2C catalytic domain/Phosphomannose isomerase type I%2C helical insertion domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20511|Pfam:PF20512 LTnewLM_32 Pfam protein_match 620586 620783 . - . Parent=LTnewLM_320022100.1:pep;Name=PF20512;signature_desc=Phosphomannose isomerase type I%2C helical insertion domain LTnewLM_32 Pfam protein_match 620898 621335 . - . Parent=LTnewLM_320022100.1:pep;Name=PF20511;signature_desc=Phosphomannose isomerase type I%2C catalytic domain ### LTnewLM_32 AUGUSTUS gene 622519 625332 1 - . ID=LTnewLM_320022200 LTnewLM_32 AUGUSTUS mRNA 622519 625332 1 - . ID=LTnewLM_320022200.1;Parent=LTnewLM_320022200 LTnewLM_32 AUGUSTUS CDS 622519 625332 1 - 0 ID=LTnewLM_320022200.1:CDS:1;Parent=LTnewLM_320022200.1 ### LTnewLM_32 . polypeptide 622519 625332 . - . ID=LTnewLM_320022200.1:pep;Derives_from=LTnewLM_320022200.1;orthologous_to=LTnewLM_280032800.1,LmjF.28.2530_mRNA;ortholog_cluster=OG0000421;product=term%3DPIF1-like helicase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05970|Pfam:PF13604;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_32 Pfam protein_match 624346 624519 . - . Parent=LTnewLM_320022200.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_32 Pfam protein_match 624349 624933 . - . Parent=LTnewLM_320022200.1:pep;Name=PF13604;signature_desc=AAA domain LTnewLM_32 Pfam protein_match 624721 624933 . - . Parent=LTnewLM_320022200.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 ### LTnewLM_32 AUGUSTUS gene 626310 628316 1 - . ID=LTnewLM_320022300 LTnewLM_32 AUGUSTUS mRNA 626310 628316 1 - . ID=LTnewLM_320022300.1;Parent=LTnewLM_320022300 LTnewLM_32 AUGUSTUS CDS 626310 628316 1 - 0 ID=LTnewLM_320022300.1:CDS:1;Parent=LTnewLM_320022300.1 ### LTnewLM_32 . polypeptide 626310 628316 . - . ID=LTnewLM_320022300.1:pep;Derives_from=LTnewLM_320022300.1;orthologous_to=LmjF.32.1600_mRNA;ortholog_cluster=OG0004790;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 632300 633175 1 - . ID=LTnewLM_320022400 LTnewLM_32 AUGUSTUS mRNA 632300 633175 1 - . ID=LTnewLM_320022400.1;Parent=LTnewLM_320022400 LTnewLM_32 AUGUSTUS CDS 632300 633175 1 - 0 ID=LTnewLM_320022400.1:CDS:1;Parent=LTnewLM_320022400.1 ### LTnewLM_32 . polypeptide 632300 633175 . - . ID=LTnewLM_320022400.1:pep;Derives_from=LTnewLM_320022400.1;orthologous_to=LmjF.32.1610_mRNA;ortholog_cluster=OG0004791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 634593 636896 1 - . ID=LTnewLM_320022500 LTnewLM_32 AUGUSTUS mRNA 634593 636896 1 - . ID=LTnewLM_320022500.1;Parent=LTnewLM_320022500 LTnewLM_32 AUGUSTUS CDS 634593 636896 1 - 0 ID=LTnewLM_320022500.1:CDS:1;Parent=LTnewLM_320022500.1 ### LTnewLM_32 . polypeptide 634593 636896 . - . ID=LTnewLM_320022500.1:pep;Derives_from=LTnewLM_320022500.1;orthologous_to=LmjF.32.1620_mRNA;ortholog_cluster=OG0004792;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 638808 639560 1 - . ID=LTnewLM_320022600 LTnewLM_32 AUGUSTUS mRNA 638808 639560 1 - . ID=LTnewLM_320022600.1;Parent=LTnewLM_320022600 LTnewLM_32 AUGUSTUS CDS 638808 639560 1 - 0 ID=LTnewLM_320022600.1:CDS:1;Parent=LTnewLM_320022600.1 ### LTnewLM_32 . polypeptide 638808 639560 . - . ID=LTnewLM_320022600.1:pep;Derives_from=LTnewLM_320022600.1;orthologous_to=LmjF.32.1635_mRNA;ortholog_cluster=OG0004793;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 640575 641243 1 - . ID=LTnewLM_320022700 LTnewLM_32 AUGUSTUS mRNA 640575 641243 1 - . ID=LTnewLM_320022700.1;Parent=LTnewLM_320022700 LTnewLM_32 AUGUSTUS CDS 640575 641243 1 - 0 ID=LTnewLM_320022700.1:CDS:1;Parent=LTnewLM_320022700.1 ### LTnewLM_32 . polypeptide 640575 641243 . - . ID=LTnewLM_320022700.1:pep;Derives_from=LTnewLM_320022700.1;orthologous_to=LmjF.32.1640_mRNA;ortholog_cluster=OG0004794;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 643196 645967 . - . ID=LTnewLM_320022800;coverage=0.998;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1650_0 LTnewLM_32 Liftoff mRNA 643196 645967 . - . ID=LTnewLM_320022800.1;Parent=LTnewLM_320022800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 643196 645967 . - 0 ID=LTnewLM_320022800.1:CDS:1;Parent=LTnewLM_320022800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 643196 645967 . - . ID=LTnewLM_320022800.1:pep;Derives_from=LTnewLM_320022800.1;orthologous_to=LmjF.32.1650_mRNA;ortholog_cluster=OG0004795;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 647837 651367 1 - . ID=LTnewLM_320022900 LTnewLM_32 AUGUSTUS mRNA 647837 651367 1 - . ID=LTnewLM_320022900.1;Parent=LTnewLM_320022900 LTnewLM_32 AUGUSTUS CDS 647837 651367 1 - 0 ID=LTnewLM_320022900.1:CDS:1;Parent=LTnewLM_320022900.1 ### LTnewLM_32 . polypeptide 647837 651367 . - . ID=LTnewLM_320022900.1:pep;Derives_from=LTnewLM_320022900.1;orthologous_to=LmjF.32.1660_mRNA;ortholog_cluster=OG0004796;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 652317 653198 1 - . ID=LTnewLM_320023000 LTnewLM_32 AUGUSTUS mRNA 652317 653198 1 - . ID=LTnewLM_320023000.1;Parent=LTnewLM_320023000 LTnewLM_32 AUGUSTUS CDS 652317 653198 1 - 0 ID=LTnewLM_320023000.1:CDS:1;Parent=LTnewLM_320023000.1 ### LTnewLM_32 . polypeptide 652317 653198 . - . ID=LTnewLM_320023000.1:pep;Derives_from=LTnewLM_320023000.1;orthologous_to=LmjF.32.1670_mRNA;ortholog_cluster=OG0004797;product=term%3DNAD synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02540 LTnewLM_32 Pfam protein_match 652398 653111 . - . Parent=LTnewLM_320023000.1:pep;Name=PF02540;signature_desc=NAD synthase ### LTnewLM_32 AUGUSTUS gene 654792 655202 1 - . ID=LTnewLM_320023100 LTnewLM_32 AUGUSTUS mRNA 654792 655202 1 - . ID=LTnewLM_320023100.1;Parent=LTnewLM_320023100 LTnewLM_32 AUGUSTUS CDS 654792 655202 1 - 0 ID=LTnewLM_320023100.1:CDS:1;Parent=LTnewLM_320023100.1 ### LTnewLM_32 . polypeptide 654792 655202 . - . ID=LTnewLM_320023100.1:pep;Derives_from=LTnewLM_320023100.1;orthologous_to=LmjF.32.1680_mRNA;ortholog_cluster=OG0004798;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 658436 660127 1 - . ID=LTnewLM_320023200 LTnewLM_32 AUGUSTUS mRNA 658436 660127 1 - . ID=LTnewLM_320023200.1;Parent=LTnewLM_320023200 LTnewLM_32 AUGUSTUS CDS 658436 660127 1 - 0 ID=LTnewLM_320023200.1:CDS:1;Parent=LTnewLM_320023200.1 ### LTnewLM_32 . polypeptide 658436 660127 . - . ID=LTnewLM_320023200.1:pep;Derives_from=LTnewLM_320023200.1;orthologous_to=LmjF.32.1690_mRNA;ortholog_cluster=OG0004799;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_32 Pfam protein_match 659009 659725 . - . Parent=LTnewLM_320023200.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_32 AUGUSTUS gene 662981 665503 1 - . ID=LTnewLM_320023300 LTnewLM_32 AUGUSTUS mRNA 662981 665503 1 - . ID=LTnewLM_320023300.1;Parent=LTnewLM_320023300 LTnewLM_32 AUGUSTUS CDS 662981 665503 1 - 0 ID=LTnewLM_320023300.1:CDS:1;Parent=LTnewLM_320023300.1 ### LTnewLM_32 . polypeptide 662981 665503 . - . ID=LTnewLM_320023300.1:pep;Derives_from=LTnewLM_320023300.1;orthologous_to=LmjF.32.1700_mRNA;ortholog_cluster=OG0004800;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 666833 668848 1 - . ID=LTnewLM_320023400 LTnewLM_32 AUGUSTUS mRNA 666833 668848 1 - . ID=LTnewLM_320023400.1;Parent=LTnewLM_320023400 LTnewLM_32 AUGUSTUS CDS 666833 668848 1 - 0 ID=LTnewLM_320023400.1:CDS:1;Parent=LTnewLM_320023400.1 ### LTnewLM_32 . polypeptide 666833 668848 . - . ID=LTnewLM_320023400.1:pep;Derives_from=LTnewLM_320023400.1;orthologous_to=LmjF.32.1710_mRNA;ortholog_cluster=OG0004801;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 670362 672542 1 - . ID=LTnewLM_320023500 LTnewLM_32 AUGUSTUS mRNA 670362 672542 1 - . ID=LTnewLM_320023500.1;Parent=LTnewLM_320023500 LTnewLM_32 AUGUSTUS CDS 670362 672542 1 - 0 ID=LTnewLM_320023500.1:CDS:1;Parent=LTnewLM_320023500.1 ### LTnewLM_32 . polypeptide 670362 672542 . - . ID=LTnewLM_320023500.1:pep;Derives_from=LTnewLM_320023500.1;orthologous_to=LmjF.32.1720_mRNA;ortholog_cluster=OG0004802;product=term%3DDNA polymerase alpha/epsilon subunit B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04042;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_32 Pfam protein_match 671010 671537 . - . Parent=LTnewLM_320023500.1:pep;Name=PF04042;signature_desc=DNA polymerase alpha/epsilon subunit B;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_32 AUGUSTUS gene 673930 674901 1 - . ID=LTnewLM_320023600 LTnewLM_32 AUGUSTUS mRNA 673930 674901 1 - . ID=LTnewLM_320023600.1;Parent=LTnewLM_320023600 LTnewLM_32 AUGUSTUS CDS 673930 674901 1 - 0 ID=LTnewLM_320023600.1:CDS:1;Parent=LTnewLM_320023600.1 ### LTnewLM_32 . polypeptide 673930 674901 . - . ID=LTnewLM_320023600.1:pep;Derives_from=LTnewLM_320023600.1;orthologous_to=LmjF.32.1730_mRNA;ortholog_cluster=OG0004803;product=term%3DCoatomer epsilon subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04733;Ontology_term=GO:0006890,GO:0005198 LTnewLM_32 Pfam protein_match 673963 674901 . - . Parent=LTnewLM_320023600.1:pep;Name=PF04733;signature_desc=Coatomer epsilon subunit;Ontology_term=GO:0005198,GO:0006890 ### LTnewLM_32 AUGUSTUS gene 678578 678967 1 - . ID=LTnewLM_320023700 LTnewLM_32 AUGUSTUS mRNA 678578 678967 1 - . ID=LTnewLM_320023700.1;Parent=LTnewLM_320023700 LTnewLM_32 AUGUSTUS CDS 678578 678967 1 - 0 ID=LTnewLM_320023700.1:CDS:1;Parent=LTnewLM_320023700.1 ### LTnewLM_32 . polypeptide 678578 678967 . - . ID=LTnewLM_320023700.1:pep;Derives_from=LTnewLM_320023700.1;orthologous_to=LmjF.32.1740_mRNA;ortholog_cluster=OG0004804;product=term%3DWW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00397|Pfam:PF00642;Ontology_term=GO:0046872,GO:0005515 LTnewLM_32 Pfam protein_match 678647 678706 . - . Parent=LTnewLM_320023700.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_32 Pfam protein_match 678803 678886 . - . Parent=LTnewLM_320023700.1:pep;Name=PF00397;signature_desc=WW domain;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 680767 683100 1 - . ID=LTnewLM_320023800 LTnewLM_32 AUGUSTUS mRNA 680767 683100 1 - . ID=LTnewLM_320023800.1;Parent=LTnewLM_320023800 LTnewLM_32 AUGUSTUS CDS 680767 683100 1 - 0 ID=LTnewLM_320023800.1:CDS:1;Parent=LTnewLM_320023800.1 ### LTnewLM_32 . polypeptide 680767 683100 . - . ID=LTnewLM_320023800.1:pep;Derives_from=LTnewLM_320023800.1;orthologous_to=LmjF.32.1750_mRNA;ortholog_cluster=OG0004805;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_32 Pfam protein_match 681130 681198 . - . Parent=LTnewLM_320023800.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_32 Pfam protein_match 681394 681456 . - . Parent=LTnewLM_320023800.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_32 Pfam protein_match 681508 681597 . - . Parent=LTnewLM_320023800.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_32 Pfam protein_match 682669 682713 . - . Parent=LTnewLM_320023800.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_32 Pfam protein_match 682759 682842 . - . Parent=LTnewLM_320023800.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_32 AUGUSTUS gene 684972 686669 1 - . ID=LTnewLM_320023900 LTnewLM_32 AUGUSTUS mRNA 684972 686669 1 - . ID=LTnewLM_320023900.1;Parent=LTnewLM_320023900 LTnewLM_32 AUGUSTUS CDS 684972 686669 1 - 0 ID=LTnewLM_320023900.1:CDS:1;Parent=LTnewLM_320023900.1 ### LTnewLM_32 . polypeptide 684972 686669 . - . ID=LTnewLM_320023900.1:pep;Derives_from=LTnewLM_320023900.1;orthologous_to=LmjF.32.1760_mRNA;ortholog_cluster=OG0004806;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 687775 689316 1 - . ID=LTnewLM_320024000 LTnewLM_32 AUGUSTUS mRNA 687775 689316 1 - . ID=LTnewLM_320024000.1;Parent=LTnewLM_320024000 LTnewLM_32 AUGUSTUS CDS 687775 689316 1 - 0 ID=LTnewLM_320024000.1:CDS:1;Parent=LTnewLM_320024000.1 ### LTnewLM_32 . polypeptide 687775 689316 . - . ID=LTnewLM_320024000.1:pep;Derives_from=LTnewLM_320024000.1;orthologous_to=LmjF.32.1770_mRNA;ortholog_cluster=OG0004807;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 690116 690683 . - . ID=LTnewLM_320024100:pseudogene;coverage=0.996;sequence_ID=0.910;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1780_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 690116 690683 . - . ID=LTnewLM_320024100.1;Parent=LTnewLM_320024100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 690116 690683 . - . ID=LTnewLM_320024100.1:pseudogenic_exon:1;Parent=LTnewLM_320024100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 690116 690683 . - . ID=LTnewLM_320024100.1:pep;Derives_from=LTnewLM_320024100.1;product=term%3Dhypothetical protein ### LTnewLM_32 Liftoff gene 691450 693414 . - . ID=LTnewLM_320024200;coverage=1.0;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1790_0 LTnewLM_32 Liftoff mRNA 691450 693414 . - . ID=LTnewLM_320024200.1;Parent=LTnewLM_320024200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 691450 693414 . - 0 ID=LTnewLM_320024200.1:CDS:1;Parent=LTnewLM_320024200.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 691450 693414 . - . ID=LTnewLM_320024200.1:pep;Derives_from=LTnewLM_320024200.1;orthologous_to=LmjF.32.1790_mRNA;ortholog_cluster=OG0004808;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 694480 695214 1 - . ID=LTnewLM_320024300 LTnewLM_32 AUGUSTUS mRNA 694480 695214 1 - . ID=LTnewLM_320024300.1;Parent=LTnewLM_320024300 LTnewLM_32 AUGUSTUS CDS 694480 695214 1 - 0 ID=LTnewLM_320024300.1:CDS:1;Parent=LTnewLM_320024300.1 ### LTnewLM_32 . polypeptide 694480 695214 . - . ID=LTnewLM_320024300.1:pep;Derives_from=LTnewLM_320024300.1;orthologous_to=LmjF.32.1800_mRNA;ortholog_cluster=OG0004809;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 696055 696516 1 - . ID=LTnewLM_320024400 LTnewLM_32 AUGUSTUS mRNA 696055 696516 1 - . ID=LTnewLM_320024400.1;Parent=LTnewLM_320024400 LTnewLM_32 AUGUSTUS CDS 696055 696516 1 - 0 ID=LTnewLM_320024400.1:CDS:1;Parent=LTnewLM_320024400.1 ### LTnewLM_32 . polypeptide 696055 696516 . - . ID=LTnewLM_320024400.1:pep;Derives_from=LTnewLM_320024400.1;orthologous_to=LmjF.32.1802_mRNA;ortholog_cluster=OG0004810;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 700981 702948 1 - . ID=LTnewLM_320024500 LTnewLM_32 AUGUSTUS mRNA 700981 702948 1 - . ID=LTnewLM_320024500.1;Parent=LTnewLM_320024500 LTnewLM_32 AUGUSTUS CDS 700981 702948 1 - 0 ID=LTnewLM_320024500.1:CDS:1;Parent=LTnewLM_320024500.1 ### LTnewLM_32 . polypeptide 700981 702948 . - . ID=LTnewLM_320024500.1:pep;Derives_from=LTnewLM_320024500.1;orthologous_to=LmjF.32.1810_mRNA;ortholog_cluster=OG0004811;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF00169;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 700996 701331 . - . Parent=LTnewLM_320024500.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_32 Pfam protein_match 701545 702378 . - . Parent=LTnewLM_320024500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 701560 702366 . - . Parent=LTnewLM_320024500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 709109 709696 1 - . ID=LTnewLM_320024600 LTnewLM_32 AUGUSTUS mRNA 709109 709696 1 - . ID=LTnewLM_320024600.1;Parent=LTnewLM_320024600 LTnewLM_32 AUGUSTUS CDS 709109 709696 1 - 0 ID=LTnewLM_320024600.1:CDS:1;Parent=LTnewLM_320024600.1 ### LTnewLM_32 . polypeptide 709109 709696 . - . ID=LTnewLM_320024600.1:pep;Derives_from=LTnewLM_320024600.1;orthologous_to=LTnewLM_320024700.1,LmjF.32.1820_mRNA,LmjF.32.1830_mRNA;ortholog_cluster=OG0000233;product=term%3DIron/manganese superoxide dismutases%2C alpha-hairpin domain/Iron/manganese superoxide dismutases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00081|Pfam:PF02777;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784 LTnewLM_32 Pfam protein_match 709121 709426 . - . Parent=LTnewLM_320024600.1:pep;Name=PF02777;signature_desc=Iron/manganese superoxide dismutases%2C C-terminal domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 LTnewLM_32 Pfam protein_match 709448 709690 . - . Parent=LTnewLM_320024600.1:pep;Name=PF00081;signature_desc=Iron/manganese superoxide dismutases%2C alpha-hairpin domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 ### LTnewLM_32 AUGUSTUS gene 711599 712225 1 - . ID=LTnewLM_320024700 LTnewLM_32 AUGUSTUS mRNA 711599 712225 1 - . ID=LTnewLM_320024700.1;Parent=LTnewLM_320024700 LTnewLM_32 AUGUSTUS CDS 711599 712225 1 - 0 ID=LTnewLM_320024700.1:CDS:1;Parent=LTnewLM_320024700.1 ### LTnewLM_32 . polypeptide 711599 712225 . - . ID=LTnewLM_320024700.1:pep;Derives_from=LTnewLM_320024700.1;orthologous_to=LTnewLM_320024600.1,LmjF.32.1820_mRNA,LmjF.32.1830_mRNA;ortholog_cluster=OG0000233;product=term%3DIron/manganese superoxide dismutases%2C alpha-hairpin domain/Iron/manganese superoxide dismutases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00081|Pfam:PF02777;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784 LTnewLM_32 Pfam protein_match 711653 711955 . - . Parent=LTnewLM_320024700.1:pep;Name=PF02777;signature_desc=Iron/manganese superoxide dismutases%2C C-terminal domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 LTnewLM_32 Pfam protein_match 711977 712219 . - . Parent=LTnewLM_320024700.1:pep;Name=PF00081;signature_desc=Iron/manganese superoxide dismutases%2C alpha-hairpin domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 ### LTnewLM_32 AUGUSTUS gene 714558 715232 1 - . ID=LTnewLM_320024800 LTnewLM_32 AUGUSTUS mRNA 714558 715232 1 - . ID=LTnewLM_320024800.1;Parent=LTnewLM_320024800 LTnewLM_32 AUGUSTUS CDS 714558 715232 1 - 0 ID=LTnewLM_320024800.1:CDS:1;Parent=LTnewLM_320024800.1 ### LTnewLM_32 . polypeptide 714558 715232 . - . ID=LTnewLM_320024800.1:pep;Derives_from=LTnewLM_320024800.1;orthologous_to=LmjF.32.1840_mRNA;ortholog_cluster=OG0004812;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Signal recognition particle receptor beta subunit/Gtr1/RagA G protein conserved region/Ras family/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF09439|Pfam:PF04670|Pfam:PF00071|Pfam:PF01926;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_32 Pfam protein_match 714666 715133 . - . Parent=LTnewLM_320024800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_32 Pfam protein_match 714744 715133 . - . Parent=LTnewLM_320024800.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_32 Pfam protein_match 714765 715148 . - . Parent=LTnewLM_320024800.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 714789 715133 . - . Parent=LTnewLM_320024800.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_32 Pfam protein_match 714792 715133 . - . Parent=LTnewLM_320024800.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_32 Pfam protein_match 714798 715130 . - . Parent=LTnewLM_320024800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_32 AUGUSTUS gene 716313 718097 1 - . ID=LTnewLM_320024900 LTnewLM_32 AUGUSTUS mRNA 716313 718097 1 - . ID=LTnewLM_320024900.1;Parent=LTnewLM_320024900 LTnewLM_32 AUGUSTUS CDS 716313 718097 1 - 0 ID=LTnewLM_320024900.1:CDS:1;Parent=LTnewLM_320024900.1 ### LTnewLM_32 . polypeptide 716313 718097 . - . ID=LTnewLM_320024900.1:pep;Derives_from=LTnewLM_320024900.1;orthologous_to=LmjF.32.1850_mRNA;ortholog_cluster=OG0004813;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_32 Pfam protein_match 716472 717989 . - . Parent=LTnewLM_320024900.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_32 AUGUSTUS gene 718871 720115 1 - . ID=LTnewLM_320025000 LTnewLM_32 AUGUSTUS mRNA 718871 720115 1 - . ID=LTnewLM_320025000.1;Parent=LTnewLM_320025000 LTnewLM_32 AUGUSTUS CDS 718871 720115 1 - 0 ID=LTnewLM_320025000.1:CDS:1;Parent=LTnewLM_320025000.1 ### LTnewLM_32 . polypeptide 718871 720115 . - . ID=LTnewLM_320025000.1:pep;Derives_from=LTnewLM_320025000.1;orthologous_to=LmjF.32.1860_mRNA;ortholog_cluster=OG0004814;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 722106 723983 1 - . ID=LTnewLM_320025100 LTnewLM_32 AUGUSTUS mRNA 722106 723983 1 - . ID=LTnewLM_320025100.1;Parent=LTnewLM_320025100 LTnewLM_32 AUGUSTUS CDS 722106 723983 1 - 0 ID=LTnewLM_320025100.1:CDS:1;Parent=LTnewLM_320025100.1 ### LTnewLM_32 . polypeptide 722106 723983 . - . ID=LTnewLM_320025100.1:pep;Derives_from=LTnewLM_320025100.1;orthologous_to=LmjF.32.1870_mRNA;ortholog_cluster=OG0004815;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 726269 726745 1 - . ID=LTnewLM_320025200 LTnewLM_32 AUGUSTUS mRNA 726269 726745 1 - . ID=LTnewLM_320025200.1;Parent=LTnewLM_320025200 LTnewLM_32 AUGUSTUS CDS 726269 726745 1 - 0 ID=LTnewLM_320025200.1:CDS:1;Parent=LTnewLM_320025200.1 ### LTnewLM_32 . polypeptide 726269 726745 . - . ID=LTnewLM_320025200.1:pep;Derives_from=LTnewLM_320025200.1;orthologous_to=LmjF.32.1875_mRNA;ortholog_cluster=OG0004816;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 730077 732341 1 - . ID=LTnewLM_320025300 LTnewLM_32 AUGUSTUS mRNA 730077 732341 1 - . ID=LTnewLM_320025300.1;Parent=LTnewLM_320025300 LTnewLM_32 AUGUSTUS CDS 730077 732341 1 - 0 ID=LTnewLM_320025300.1:CDS:1;Parent=LTnewLM_320025300.1 ### LTnewLM_32 . polypeptide 730077 732341 . - . ID=LTnewLM_320025300.1:pep;Derives_from=LTnewLM_320025300.1;orthologous_to=LmjF.32.1880_mRNA;ortholog_cluster=OG0004817;product=term%3D3'-5' exonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01612;Ontology_term=GO:0006139,GO:0003676,GO:0008408 LTnewLM_32 Pfam protein_match 730194 730703 . - . Parent=LTnewLM_320025300.1:pep;Name=PF01612;signature_desc=3'-5' exonuclease;Ontology_term=GO:0003676,GO:0008408,GO:0006139 ### LTnewLM_32 AUGUSTUS gene 735275 739507 1 - . ID=LTnewLM_320025400 LTnewLM_32 AUGUSTUS mRNA 735275 739507 1 - . ID=LTnewLM_320025400.1;Parent=LTnewLM_320025400 LTnewLM_32 AUGUSTUS CDS 735275 739507 1 - 0 ID=LTnewLM_320025400.1:CDS:1;Parent=LTnewLM_320025400.1 ### LTnewLM_32 . polypeptide 735275 739507 . - . ID=LTnewLM_320025400.1:pep;Derives_from=LTnewLM_320025400.1;orthologous_to=LmjF.32.1890_mRNA;ortholog_cluster=OG0004818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 740611 742428 1 - . ID=LTnewLM_320025500 LTnewLM_32 AUGUSTUS mRNA 740611 742428 1 - . ID=LTnewLM_320025500.1;Parent=LTnewLM_320025500 LTnewLM_32 AUGUSTUS CDS 740611 742428 1 - 0 ID=LTnewLM_320025500.1:CDS:1;Parent=LTnewLM_320025500.1 ### LTnewLM_32 . polypeptide 740611 742428 . - . ID=LTnewLM_320025500.1:pep;Derives_from=LTnewLM_320025500.1;orthologous_to=LmjF.32.1900_mRNA;ortholog_cluster=OG0004819;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 744188 746161 1 - . ID=LTnewLM_320025600 LTnewLM_32 AUGUSTUS mRNA 744188 746161 1 - . ID=LTnewLM_320025600.1;Parent=LTnewLM_320025600 LTnewLM_32 AUGUSTUS CDS 744188 744313 1 - 0 ID=LTnewLM_320025600.1:CDS:1;Parent=LTnewLM_320025600.1 LTnewLM_32 AUGUSTUS CDS 744965 746161 1 - 0 ID=LTnewLM_320025600.1:CDS:2;Parent=LTnewLM_320025600.1 ### LTnewLM_32 . polypeptide 744188 746161 . - . ID=LTnewLM_320025600.1:pep;Derives_from=LTnewLM_320025600.1;orthologous_to=LmjF.32.1910_mRNA;ortholog_cluster=OG0004820;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 748826 750643 . - . ID=LTnewLM_320025700;coverage=1.0;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.1920_0 LTnewLM_32 Liftoff mRNA 748826 750643 . - . ID=LTnewLM_320025700.1;Parent=LTnewLM_320025700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 748826 750643 . - 0 ID=LTnewLM_320025700.1:CDS:1;Parent=LTnewLM_320025700.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 748826 750643 . - . ID=LTnewLM_320025700.1:pep;Derives_from=LTnewLM_320025700.1;orthologous_to=LmjF.32.1920_mRNA;ortholog_cluster=OG0004821;product=term%3DVitamin B6 photo-protection and homoeostasis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04884 LTnewLM_32 Pfam protein_match 749489 750172 . - . Parent=LTnewLM_320025700.1:pep;Name=PF04884;signature_desc=Vitamin B6 photo-protection and homoeostasis ### LTnewLM_32 AUGUSTUS gene 754419 756767 1 - . ID=LTnewLM_320025800 LTnewLM_32 AUGUSTUS mRNA 754419 756767 1 - . ID=LTnewLM_320025800.1;Parent=LTnewLM_320025800 LTnewLM_32 AUGUSTUS CDS 754419 756767 1 - 0 ID=LTnewLM_320025800.1:CDS:1;Parent=LTnewLM_320025800.1 ### LTnewLM_32 . polypeptide 754419 756767 . - . ID=LTnewLM_320025800.1:pep;Derives_from=LTnewLM_320025800.1;orthologous_to=LmjF.32.1930_mRNA;ortholog_cluster=OG0004822;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 758169 759140 1 - . ID=LTnewLM_320025900 LTnewLM_32 AUGUSTUS mRNA 758169 759140 1 - . ID=LTnewLM_320025900.1;Parent=LTnewLM_320025900 LTnewLM_32 AUGUSTUS CDS 758169 759140 1 - 0 ID=LTnewLM_320025900.1:CDS:1;Parent=LTnewLM_320025900.1 ### LTnewLM_32 . polypeptide 758169 759140 . - . ID=LTnewLM_320025900.1:pep;Derives_from=LTnewLM_320025900.1;orthologous_to=LmjF.32.1940_mRNA;ortholog_cluster=OG0004823;product=term%3DDnaJ domain/DnaJ C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556 LTnewLM_32 Pfam protein_match 758229 758714 . - . Parent=LTnewLM_320025900.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_32 Pfam protein_match 758940 759134 . - . Parent=LTnewLM_320025900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_32 AUGUSTUS gene 762322 763605 0.8 - . ID=LTnewLM_320026000 LTnewLM_32 AUGUSTUS mRNA 762322 763605 0.8 - . ID=LTnewLM_320026000.1;Parent=LTnewLM_320026000 LTnewLM_32 AUGUSTUS CDS 762322 763339 0.83 - 1 ID=LTnewLM_320026000.1:CDS:1;Parent=LTnewLM_320026000.1 LTnewLM_32 AUGUSTUS CDS 763397 763605 0.8 - 0 ID=LTnewLM_320026000.1:CDS:2;Parent=LTnewLM_320026000.1 ### LTnewLM_32 . polypeptide 762322 763605 . - . ID=LTnewLM_320026000.1:pep;Derives_from=LTnewLM_320026000.1;orthologous_to=LmjF.32.1950_mRNA;ortholog_cluster=OG0004824;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 766033 766942 . - . ID=LTnewLM_320026100:pseudogene;coverage=0.994;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.1960_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 766033 766942 . - . ID=LTnewLM_320026100.1;Parent=LTnewLM_320026100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 766033 766942 . - . ID=LTnewLM_320026100.1:pseudogenic_exon:1;Parent=LTnewLM_320026100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 766033 766942 . - . ID=LTnewLM_320026100.1:pep;Derives_from=LTnewLM_320026100.1;orthologous_to=LmjF.32.1960_mRNA;ortholog_cluster=OG0007623;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_32 Pfam protein_match 766310 766708 . - . Parent=LTnewLM_320026100.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_32 AUGUSTUS gene 768534 769964 1 - . ID=LTnewLM_320026200 LTnewLM_32 AUGUSTUS mRNA 768534 769964 1 - . ID=LTnewLM_320026200.1;Parent=LTnewLM_320026200 LTnewLM_32 AUGUSTUS CDS 768534 769964 1 - 0 ID=LTnewLM_320026200.1:CDS:1;Parent=LTnewLM_320026200.1 ### LTnewLM_32 . polypeptide 768534 769964 . - . ID=LTnewLM_320026200.1:pep;Derives_from=LTnewLM_320026200.1;orthologous_to=LmjF.32.1965_mRNA;ortholog_cluster=OG0004825;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 774588 775481 1 - . ID=LTnewLM_320026300 LTnewLM_32 AUGUSTUS mRNA 774588 775481 1 - . ID=LTnewLM_320026300.1;Parent=LTnewLM_320026300 LTnewLM_32 AUGUSTUS CDS 774588 775481 1 - 0 ID=LTnewLM_320026300.1:CDS:1;Parent=LTnewLM_320026300.1 ### LTnewLM_32 . polypeptide 774588 775481 . - . ID=LTnewLM_320026300.1:pep;Derives_from=LTnewLM_320026300.1;orthologous_to=LmjF.32.1970_mRNA;ortholog_cluster=OG0004826;product=term%3DPossible Fer4-like domain in RNase L inhibitor%2C RLI/Ribosome biogenesis protein%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04068|Pfam:PF04034 LTnewLM_32 Pfam protein_match 774864 775241 . - . Parent=LTnewLM_320026300.1:pep;Name=PF04034;signature_desc=Ribosome biogenesis protein%2C C-terminal LTnewLM_32 Pfam protein_match 775263 775355 . - . Parent=LTnewLM_320026300.1:pep;Name=PF04068;signature_desc=Possible Fer4-like domain in RNase L inhibitor%2C RLI ### LTnewLM_32 AUGUSTUS gene 776271 776717 1 - . ID=LTnewLM_320026400 LTnewLM_32 AUGUSTUS mRNA 776271 776717 1 - . ID=LTnewLM_320026400.1;Parent=LTnewLM_320026400 LTnewLM_32 AUGUSTUS CDS 776271 776717 1 - 0 ID=LTnewLM_320026400.1:CDS:1;Parent=LTnewLM_320026400.1 ### LTnewLM_32 . polypeptide 776271 776717 . - . ID=LTnewLM_320026400.1:pep;Derives_from=LTnewLM_320026400.1;orthologous_to=LmjF.32.1975_mRNA;ortholog_cluster=OG0004827;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 777960 780155 1 - . ID=LTnewLM_320026500 LTnewLM_32 AUGUSTUS mRNA 777960 780155 1 - . ID=LTnewLM_320026500.1;Parent=LTnewLM_320026500 LTnewLM_32 AUGUSTUS CDS 777960 780155 1 - 0 ID=LTnewLM_320026500.1:CDS:1;Parent=LTnewLM_320026500.1 ### LTnewLM_32 . polypeptide 777960 780155 . - . ID=LTnewLM_320026500.1:pep;Derives_from=LTnewLM_320026500.1;orthologous_to=LmjF.32.1980_mRNA;ortholog_cluster=OG0004828;product=term%3DDomain of unknown function (DUF4200)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13863 LTnewLM_32 Pfam protein_match 779541 779888 . - . Parent=LTnewLM_320026500.1:pep;Name=PF13863;signature_desc=Domain of unknown function (DUF4200) ### LTnewLM_32 AUGUSTUS gene 781874 782194 1 - . ID=LTnewLM_320026600 LTnewLM_32 AUGUSTUS mRNA 781874 782194 1 - . ID=LTnewLM_320026600.1;Parent=LTnewLM_320026600 LTnewLM_32 AUGUSTUS CDS 781874 782194 1 - 0 ID=LTnewLM_320026600.1:CDS:1;Parent=LTnewLM_320026600.1 ### LTnewLM_32 . polypeptide 781874 782194 . - . ID=LTnewLM_320026600.1:pep;Derives_from=LTnewLM_320026600.1;orthologous_to=LmjF.32.1990_mRNA;ortholog_cluster=OG0004829;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 783471 784580 1 - . ID=LTnewLM_320026700 LTnewLM_32 AUGUSTUS mRNA 783471 784580 1 - . ID=LTnewLM_320026700.1;Parent=LTnewLM_320026700 LTnewLM_32 AUGUSTUS CDS 783471 784580 1 - 0 ID=LTnewLM_320026700.1:CDS:1;Parent=LTnewLM_320026700.1 ### LTnewLM_32 . polypeptide 783471 784580 . - . ID=LTnewLM_320026700.1:pep;Derives_from=LTnewLM_320026700.1;orthologous_to=LmjF.32.2000_mRNA;ortholog_cluster=OG0004830;product=term%3DTLR4 regulator and MIR-interacting MSAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11938 LTnewLM_32 Pfam protein_match 783876 784403 . - . Parent=LTnewLM_320026700.1:pep;Name=PF11938;signature_desc=TLR4 regulator and MIR-interacting MSAP ### LTnewLM_32 AUGUSTUS gene 785698 786585 1 - . ID=LTnewLM_320026800 LTnewLM_32 AUGUSTUS mRNA 785698 786585 1 - . ID=LTnewLM_320026800.1;Parent=LTnewLM_320026800 LTnewLM_32 AUGUSTUS CDS 785698 786585 1 - 0 ID=LTnewLM_320026800.1:CDS:1;Parent=LTnewLM_320026800.1 ### LTnewLM_32 . polypeptide 785698 786585 . - . ID=LTnewLM_320026800.1:pep;Derives_from=LTnewLM_320026800.1;orthologous_to=LmjF.32.2010_mRNA;ortholog_cluster=OG0004831;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 788171 788836 1 - . ID=LTnewLM_320026900 LTnewLM_32 AUGUSTUS mRNA 788171 788836 1 - . ID=LTnewLM_320026900.1;Parent=LTnewLM_320026900 LTnewLM_32 AUGUSTUS CDS 788171 788836 1 - 0 ID=LTnewLM_320026900.1:CDS:1;Parent=LTnewLM_320026900.1 ### LTnewLM_32 . polypeptide 788171 788836 . - . ID=LTnewLM_320026900.1:pep;Derives_from=LTnewLM_320026900.1;orthologous_to=LmjF.32.2020_mRNA;ortholog_cluster=OG0004832;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_32 Pfam protein_match 788195 788722 . - . Parent=LTnewLM_320026900.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_32 AUGUSTUS gene 791568 792203 1 - . ID=LTnewLM_320027000 LTnewLM_32 AUGUSTUS mRNA 791568 792203 1 - . ID=LTnewLM_320027000.1;Parent=LTnewLM_320027000 LTnewLM_32 AUGUSTUS CDS 791568 792203 1 - 0 ID=LTnewLM_320027000.1:CDS:1;Parent=LTnewLM_320027000.1 ### LTnewLM_32 . polypeptide 791568 792203 . - . ID=LTnewLM_320027000.1:pep;Derives_from=LTnewLM_320027000.1;orthologous_to=LmjF.32.2030_mRNA;ortholog_cluster=OG0004833;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_32 Pfam protein_match 791703 792179 . - . Parent=LTnewLM_320027000.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_32 Pfam protein_match 791820 792191 . - . Parent=LTnewLM_320027000.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 791838 792179 . - . Parent=LTnewLM_320027000.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_32 Liftoff gene 793777 796590 . - . ID=LTnewLM_320027100;coverage=0.999;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.2040_0 LTnewLM_32 Liftoff mRNA 793777 796590 . - . ID=LTnewLM_320027100.1;Parent=LTnewLM_320027100;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 793777 796590 . - 0 ID=LTnewLM_320027100.1:CDS:1;Parent=LTnewLM_320027100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 793777 796590 . - . ID=LTnewLM_320027100.1:pep;Derives_from=LTnewLM_320027100.1;orthologous_to=LmjF.32.2040_mRNA;ortholog_cluster=OG0004834;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 798012 798287 1 - . ID=LTnewLM_320027200 LTnewLM_32 AUGUSTUS mRNA 798012 798287 1 - . ID=LTnewLM_320027200.1;Parent=LTnewLM_320027200 LTnewLM_32 AUGUSTUS CDS 798012 798287 1 - 0 ID=LTnewLM_320027200.1:CDS:1;Parent=LTnewLM_320027200.1 ### LTnewLM_32 . polypeptide 798012 798287 . - . ID=LTnewLM_320027200.1:pep;Derives_from=LTnewLM_320027200.1;orthologous_to=LmjF.32.2050_mRNA;ortholog_cluster=OG0004835;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 798973 801168 1 - . ID=LTnewLM_320027300 LTnewLM_32 AUGUSTUS mRNA 798973 801168 1 - . ID=LTnewLM_320027300.1;Parent=LTnewLM_320027300 LTnewLM_32 AUGUSTUS CDS 798973 801168 1 - 0 ID=LTnewLM_320027300.1:CDS:1;Parent=LTnewLM_320027300.1 ### LTnewLM_32 . polypeptide 798973 801168 . - . ID=LTnewLM_320027300.1:pep;Derives_from=LTnewLM_320027300.1;orthologous_to=LmjF.32.2060_mRNA;ortholog_cluster=OG0004836;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_32 Pfam protein_match 799138 799635 . - . Parent=LTnewLM_320027300.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_32 Pfam protein_match 799969 800766 . - . Parent=LTnewLM_320027300.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 ### LTnewLM_32 AUGUSTUS gene 804583 805587 1 - . ID=LTnewLM_320027400 LTnewLM_32 AUGUSTUS mRNA 804583 805587 1 - . ID=LTnewLM_320027400.1;Parent=LTnewLM_320027400 LTnewLM_32 AUGUSTUS CDS 804583 805587 1 - 0 ID=LTnewLM_320027400.1:CDS:1;Parent=LTnewLM_320027400.1 ### LTnewLM_32 . polypeptide 804583 805587 . - . ID=LTnewLM_320027400.1:pep;Derives_from=LTnewLM_320027400.1;orthologous_to=LmjF.32.2070_mRNA;ortholog_cluster=OG0004837;product=term%3DCytidylyltransferase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01467;Ontology_term=GO:0003824,GO:0009058 LTnewLM_32 Pfam protein_match 804604 805020 . - . Parent=LTnewLM_320027400.1:pep;Name=PF01467;signature_desc=Cytidylyltransferase-like;Ontology_term=GO:0003824,GO:0009058 ### LTnewLM_32 AUGUSTUS gene 807249 808877 1 - . ID=LTnewLM_320027500 LTnewLM_32 AUGUSTUS mRNA 807249 808877 1 - . ID=LTnewLM_320027500.1;Parent=LTnewLM_320027500 LTnewLM_32 AUGUSTUS CDS 807249 808877 1 - 0 ID=LTnewLM_320027500.1:CDS:1;Parent=LTnewLM_320027500.1 ### LTnewLM_32 . polypeptide 807249 808877 . - . ID=LTnewLM_320027500.1:pep;Derives_from=LTnewLM_320027500.1;orthologous_to=LmjF.32.2080_mRNA;ortholog_cluster=OG0004838;product=term%3DCytidine and deoxycytidylate deaminase zinc-binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00383;Ontology_term=GO:0008270,GO:0016787 LTnewLM_32 Pfam protein_match 807378 807464 . - . Parent=LTnewLM_320027500.1:pep;Name=PF00383;signature_desc=Cytidine and deoxycytidylate deaminase zinc-binding region;Ontology_term=GO:0008270,GO:0016787 ### LTnewLM_32 AUGUSTUS gene 809503 810516 1 - . ID=LTnewLM_320027600 LTnewLM_32 AUGUSTUS mRNA 809503 810516 1 - . ID=LTnewLM_320027600.1;Parent=LTnewLM_320027600 LTnewLM_32 AUGUSTUS CDS 809503 810516 1 - 0 ID=LTnewLM_320027600.1:CDS:1;Parent=LTnewLM_320027600.1 ### LTnewLM_32 . polypeptide 809503 810516 . - . ID=LTnewLM_320027600.1:pep;Derives_from=LTnewLM_320027600.1;orthologous_to=LmjF.32.2090_mRNA;ortholog_cluster=OG0004839;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 811746 814634 1 - . ID=LTnewLM_320027700 LTnewLM_32 AUGUSTUS mRNA 811746 814634 1 - . ID=LTnewLM_320027700.1;Parent=LTnewLM_320027700 LTnewLM_32 AUGUSTUS CDS 811746 814634 1 - 0 ID=LTnewLM_320027700.1:CDS:1;Parent=LTnewLM_320027700.1 ### LTnewLM_32 . polypeptide 811746 814634 . - . ID=LTnewLM_320027700.1:pep;Derives_from=LTnewLM_320027700.1;orthologous_to=LmjF.32.2100_mRNA;ortholog_cluster=OG0004840;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 819528 822134 1 - . ID=LTnewLM_320027800 LTnewLM_32 AUGUSTUS mRNA 819528 822134 1 - . ID=LTnewLM_320027800.1;Parent=LTnewLM_320027800 LTnewLM_32 AUGUSTUS CDS 819528 822134 1 - 0 ID=LTnewLM_320027800.1:CDS:1;Parent=LTnewLM_320027800.1 ### LTnewLM_32 . polypeptide 819528 822134 . - . ID=LTnewLM_320027800.1:pep;Derives_from=LTnewLM_320027800.1;orthologous_to=LmjF.32.2110_mRNA;ortholog_cluster=OG0004841;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 823585 825651 1 - . ID=LTnewLM_320027900 LTnewLM_32 AUGUSTUS mRNA 823585 825651 1 - . ID=LTnewLM_320027900.1;Parent=LTnewLM_320027900 LTnewLM_32 AUGUSTUS CDS 823585 825651 1 - 0 ID=LTnewLM_320027900.1:CDS:1;Parent=LTnewLM_320027900.1 ### LTnewLM_32 . polypeptide 823585 825651 . - . ID=LTnewLM_320027900.1:pep;Derives_from=LTnewLM_320027900.1;orthologous_to=LmjF.32.2120_mRNA;ortholog_cluster=OG0004842;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 826936 828150 1 - . ID=LTnewLM_320028000 LTnewLM_32 AUGUSTUS mRNA 826936 828150 1 - . ID=LTnewLM_320028000.1;Parent=LTnewLM_320028000 LTnewLM_32 AUGUSTUS CDS 826936 828150 1 - 0 ID=LTnewLM_320028000.1:CDS:1;Parent=LTnewLM_320028000.1 ### LTnewLM_32 . polypeptide 826936 828150 . - . ID=LTnewLM_320028000.1:pep;Derives_from=LTnewLM_320028000.1;orthologous_to=LmjF.32.2130_mRNA;ortholog_cluster=OG0004843;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 827917 828108 . - . Parent=LTnewLM_320028000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_32 AUGUSTUS gene 829029 829430 1 - . ID=LTnewLM_320028100 LTnewLM_32 AUGUSTUS mRNA 829029 829430 1 - . ID=LTnewLM_320028100.1;Parent=LTnewLM_320028100 LTnewLM_32 AUGUSTUS CDS 829029 829430 1 - 0 ID=LTnewLM_320028100.1:CDS:1;Parent=LTnewLM_320028100.1 ### LTnewLM_32 . polypeptide 829029 829430 . - . ID=LTnewLM_320028100.1:pep;Derives_from=LTnewLM_320028100.1;orthologous_to=LmjF.32.2140_mRNA;ortholog_cluster=OG0004844;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 831078 834326 1 - . ID=LTnewLM_320028200 LTnewLM_32 AUGUSTUS mRNA 831078 834326 1 - . ID=LTnewLM_320028200.1;Parent=LTnewLM_320028200 LTnewLM_32 AUGUSTUS CDS 831078 834326 1 - 0 ID=LTnewLM_320028200.1:CDS:1;Parent=LTnewLM_320028200.1 ### LTnewLM_32 . polypeptide 831078 834326 . - . ID=LTnewLM_320028200.1:pep;Derives_from=LTnewLM_320028200.1;orthologous_to=LmjF.32.2150_mRNA;ortholog_cluster=OG0004845;product=term%3DImportin repeat/Importin repeat 6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18808|Pfam:PF18829 LTnewLM_32 Pfam protein_match 831720 831992 . - . Parent=LTnewLM_320028200.1:pep;Name=PF18829;signature_desc=Importin repeat 6 LTnewLM_32 Pfam protein_match 833268 833528 . - . Parent=LTnewLM_320028200.1:pep;Name=PF18808;signature_desc=Importin repeat ### LTnewLM_32 AUGUSTUS gene 835508 838612 0.67 - . ID=LTnewLM_320028300 LTnewLM_32 AUGUSTUS mRNA 835508 838612 0.67 - . ID=LTnewLM_320028300.1;Parent=LTnewLM_320028300 LTnewLM_32 AUGUSTUS CDS 835508 838612 0.67 - 0 ID=LTnewLM_320028300.1:CDS:1;Parent=LTnewLM_320028300.1 ### LTnewLM_32 . polypeptide 835508 838612 . - . ID=LTnewLM_320028300.1:pep;Derives_from=LTnewLM_320028300.1;orthologous_to=LmjF.32.2155_mRNA;ortholog_cluster=OG0004846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 839083 839460 1 - . ID=LTnewLM_320028400 LTnewLM_32 AUGUSTUS mRNA 839083 839460 1 - . ID=LTnewLM_320028400.1;Parent=LTnewLM_320028400 LTnewLM_32 AUGUSTUS CDS 839083 839460 1 - 0 ID=LTnewLM_320028400.1:CDS:1;Parent=LTnewLM_320028400.1 ### LTnewLM_32 . polypeptide 839083 839460 . - . ID=LTnewLM_320028400.1:pep;Derives_from=LTnewLM_320028400.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 840016 843933 1 - . ID=LTnewLM_320028500 LTnewLM_32 AUGUSTUS mRNA 840016 843933 1 - . ID=LTnewLM_320028500.1;Parent=LTnewLM_320028500 LTnewLM_32 AUGUSTUS CDS 840016 843933 1 - 0 ID=LTnewLM_320028500.1:CDS:1;Parent=LTnewLM_320028500.1 ### LTnewLM_32 . polypeptide 840016 843933 . - . ID=LTnewLM_320028500.1:pep;Derives_from=LTnewLM_320028500.1;orthologous_to=LmjF.32.2160_mRNA;ortholog_cluster=OG0004847;product=term%3DSynaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_32 Pfam protein_match 840037 840186 . - . Parent=LTnewLM_320028500.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_32 AUGUSTUS gene 844921 846756 1 - . ID=LTnewLM_320028600 LTnewLM_32 AUGUSTUS mRNA 844921 846756 1 - . ID=LTnewLM_320028600.1;Parent=LTnewLM_320028600 LTnewLM_32 AUGUSTUS CDS 844921 846756 1 - 0 ID=LTnewLM_320028600.1:CDS:1;Parent=LTnewLM_320028600.1 ### LTnewLM_32 . polypeptide 844921 846756 . - . ID=LTnewLM_320028600.1:pep;Derives_from=LTnewLM_320028600.1;orthologous_to=LmjF.32.2170_mRNA;ortholog_cluster=OG0004848;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 848263 848964 1 - . ID=LTnewLM_320028700 LTnewLM_32 AUGUSTUS mRNA 848263 848964 1 - . ID=LTnewLM_320028700.1;Parent=LTnewLM_320028700 LTnewLM_32 AUGUSTUS CDS 848263 848964 1 - 0 ID=LTnewLM_320028700.1:CDS:1;Parent=LTnewLM_320028700.1 ### LTnewLM_32 . polypeptide 848263 848964 . - . ID=LTnewLM_320028700.1:pep;Derives_from=LTnewLM_320028700.1;orthologous_to=LmjF.32.2180_mRNA;ortholog_cluster=OG0004849;product=term%3DCSN8/PSMD8/EIF3K family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10075 LTnewLM_32 Pfam protein_match 848506 848835 . - . Parent=LTnewLM_320028700.1:pep;Name=PF10075;signature_desc=CSN8/PSMD8/EIF3K family ### LTnewLM_32 AUGUSTUS gene 850309 852213 1 - . ID=LTnewLM_320028800 LTnewLM_32 AUGUSTUS mRNA 850309 852213 1 - . ID=LTnewLM_320028800.1;Parent=LTnewLM_320028800 LTnewLM_32 AUGUSTUS CDS 850309 852213 1 - 0 ID=LTnewLM_320028800.1:CDS:1;Parent=LTnewLM_320028800.1 ### LTnewLM_32 . polypeptide 850309 852213 . - . ID=LTnewLM_320028800.1:pep;Derives_from=LTnewLM_320028800.1;orthologous_to=LmjF.32.2190_mRNA;ortholog_cluster=OG0004850;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 853344 856391 1 - . ID=LTnewLM_320028900 LTnewLM_32 AUGUSTUS mRNA 853344 856391 1 - . ID=LTnewLM_320028900.1;Parent=LTnewLM_320028900 LTnewLM_32 AUGUSTUS CDS 853344 856391 1 - 0 ID=LTnewLM_320028900.1:CDS:1;Parent=LTnewLM_320028900.1 ### LTnewLM_32 . polypeptide 853344 856391 . - . ID=LTnewLM_320028900.1:pep;Derives_from=LTnewLM_320028900.1;orthologous_to=LmjF.32.2200_mRNA;ortholog_cluster=OG0004851;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_32 Pfam protein_match 853464 853724 . - . Parent=LTnewLM_320028900.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_32 Pfam protein_match 853794 854063 . - . Parent=LTnewLM_320028900.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 854277 854465 . - . Parent=LTnewLM_320028900.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_32 Pfam protein_match 855381 855926 . - . Parent=LTnewLM_320028900.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_32 Pfam protein_match 855564 855914 . - . Parent=LTnewLM_320028900.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_32 AUGUSTUS gene 857108 857728 1 - . ID=LTnewLM_320029000 LTnewLM_32 AUGUSTUS mRNA 857108 857728 1 - . ID=LTnewLM_320029000.1;Parent=LTnewLM_320029000 LTnewLM_32 AUGUSTUS CDS 857108 857728 1 - 0 ID=LTnewLM_320029000.1:CDS:1;Parent=LTnewLM_320029000.1 ### LTnewLM_32 . polypeptide 857108 857728 . - . ID=LTnewLM_320029000.1:pep;Derives_from=LTnewLM_320029000.1;orthologous_to=LmjF.32.2210_mRNA;ortholog_cluster=OG0004852;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_32 Pfam protein_match 857537 857701 . - . Parent=LTnewLM_320029000.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_32 AUGUSTUS gene 859216 864403 0.72 - . ID=LTnewLM_320029100 LTnewLM_32 AUGUSTUS mRNA 859216 864403 0.72 - . ID=LTnewLM_320029100.1;Parent=LTnewLM_320029100 LTnewLM_32 AUGUSTUS CDS 859216 861993 0.72 - 0 ID=LTnewLM_320029100.1:CDS:1;Parent=LTnewLM_320029100.1 LTnewLM_32 AUGUSTUS CDS 862052 864403 0.72 - 0 ID=LTnewLM_320029100.1:CDS:2;Parent=LTnewLM_320029100.1 ### LTnewLM_32 . polypeptide 859216 864403 . - . ID=LTnewLM_320029100.1:pep;Derives_from=LTnewLM_320029100.1;orthologous_to=LmjF.32.2220_mRNA;ortholog_cluster=OG0004853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 865704 868025 1 - . ID=LTnewLM_320029200 LTnewLM_32 AUGUSTUS mRNA 865704 868025 1 - . ID=LTnewLM_320029200.1;Parent=LTnewLM_320029200 LTnewLM_32 AUGUSTUS CDS 865704 868025 1 - 0 ID=LTnewLM_320029200.1:CDS:1;Parent=LTnewLM_320029200.1 ### LTnewLM_32 . polypeptide 865704 868025 . - . ID=LTnewLM_320029200.1:pep;Derives_from=LTnewLM_320029200.1;orthologous_to=LmjF.32.2230_mRNA;ortholog_cluster=OG0004854;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Domain of unknown function (DUF4217)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF13959;Ontology_term=GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 865878 866057 . - . Parent=LTnewLM_320029200.1:pep;Name=PF13959;signature_desc=Domain of unknown function (DUF4217) LTnewLM_32 Pfam protein_match 866175 866507 . - . Parent=LTnewLM_320029200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_32 Pfam protein_match 866796 867338 . - . Parent=LTnewLM_320029200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_32 Liftoff gene 868946 872407 . - . ID=LTnewLM_320029300;coverage=0.999;sequence_ID=0.907;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.2240_0 LTnewLM_32 Liftoff mRNA 868946 872407 . - . ID=LTnewLM_320029300.1;Parent=LTnewLM_320029300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 868946 872407 . - 0 ID=LTnewLM_320029300.1:CDS:1;Parent=LTnewLM_320029300.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 868946 872407 . - . ID=LTnewLM_320029300.1:pep;Derives_from=LTnewLM_320029300.1;orthologous_to=LmjF.32.2240_mRNA;ortholog_cluster=OG0004855;product=term%3DFormyl transferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00551;Ontology_term=GO:0016742,GO:0009058 LTnewLM_32 Pfam protein_match 871085 871327 . - . Parent=LTnewLM_320029300.1:pep;Name=PF00551;signature_desc=Formyl transferase;Ontology_term=GO:0016742,GO:0009058 ### LTnewLM_32 AUGUSTUS gene 878941 880059 1 - . ID=LTnewLM_320029400 LTnewLM_32 AUGUSTUS mRNA 878941 880059 1 - . ID=LTnewLM_320029400.1;Parent=LTnewLM_320029400 LTnewLM_32 AUGUSTUS CDS 878941 880059 1 - 0 ID=LTnewLM_320029400.1:CDS:1;Parent=LTnewLM_320029400.1 ### LTnewLM_32 . polypeptide 878941 880059 . - . ID=LTnewLM_320029400.1:pep;Derives_from=LTnewLM_320029400.1;orthologous_to=LmjF.32.2250_mRNA;ortholog_cluster=OG0004856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 888295 888858 1 - . ID=LTnewLM_320029500 LTnewLM_32 AUGUSTUS mRNA 888295 888858 1 - . ID=LTnewLM_320029500.1;Parent=LTnewLM_320029500 LTnewLM_32 AUGUSTUS CDS 888295 888858 1 - 0 ID=LTnewLM_320029500.1:CDS:1;Parent=LTnewLM_320029500.1 ### LTnewLM_32 . polypeptide 888295 888858 . - . ID=LTnewLM_320029500.1:pep;Derives_from=LTnewLM_320029500.1;orthologous_to=LmjF.32.2260_mRNA;ortholog_cluster=OG0004857;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 890093 895234 1 - . ID=LTnewLM_320029600 LTnewLM_32 AUGUSTUS mRNA 890093 895234 1 - . ID=LTnewLM_320029600.1;Parent=LTnewLM_320029600 LTnewLM_32 AUGUSTUS CDS 890093 895234 1 - 0 ID=LTnewLM_320029600.1:CDS:1;Parent=LTnewLM_320029600.1 ### LTnewLM_32 . polypeptide 890093 895234 . - . ID=LTnewLM_320029600.1:pep;Derives_from=LTnewLM_320029600.1;orthologous_to=LmjF.32.2270_mRNA;ortholog_cluster=OG0004858;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 896949 897803 1 - . ID=LTnewLM_320029700 LTnewLM_32 AUGUSTUS mRNA 896949 897803 1 - . ID=LTnewLM_320029700.1;Parent=LTnewLM_320029700 LTnewLM_32 AUGUSTUS CDS 896949 897803 1 - 0 ID=LTnewLM_320029700.1:CDS:1;Parent=LTnewLM_320029700.1 ### LTnewLM_32 . polypeptide 896949 897803 . - . ID=LTnewLM_320029700.1:pep;Derives_from=LTnewLM_320029700.1;orthologous_to=LmjF.32.2280_mRNA;ortholog_cluster=OG0004859;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 900478 902412 . - . ID=LTnewLM_320029800;coverage=0.995;sequence_ID=0.922;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.2290_0 LTnewLM_32 Liftoff mRNA 900478 902412 . - . ID=LTnewLM_320029800.1;Parent=LTnewLM_320029800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 900478 902412 . - 0 ID=LTnewLM_320029800.1:CDS:1;Parent=LTnewLM_320029800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 900478 902412 . - . ID=LTnewLM_320029800.1:pep;Derives_from=LTnewLM_320029800.1;orthologous_to=LmjF.32.2290_mRNA;ortholog_cluster=OG0004860;product=term%3DPAP2 superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01569;Ontology_term=GO:0003824,GO:0016020 LTnewLM_32 Pfam protein_match 901321 901644 . - . Parent=LTnewLM_320029800.1:pep;Name=PF01569;signature_desc=PAP2 superfamily;Ontology_term=GO:0003824,GO:0016020 ### LTnewLM_32 AUGUSTUS gene 904409 905722 1 - . ID=LTnewLM_320029900 LTnewLM_32 AUGUSTUS mRNA 904409 905722 1 - . ID=LTnewLM_320029900.1;Parent=LTnewLM_320029900 LTnewLM_32 AUGUSTUS CDS 904409 905722 1 - 0 ID=LTnewLM_320029900.1:CDS:1;Parent=LTnewLM_320029900.1 ### LTnewLM_32 . polypeptide 904409 905722 . - . ID=LTnewLM_320029900.1:pep;Derives_from=LTnewLM_320029900.1;orthologous_to=LmjF.32.2300_mRNA;ortholog_cluster=OG0004861;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 906674 910363 1 - . ID=LTnewLM_320030000 LTnewLM_32 AUGUSTUS mRNA 906674 910363 1 - . ID=LTnewLM_320030000.1;Parent=LTnewLM_320030000 LTnewLM_32 AUGUSTUS CDS 906674 910363 1 - 0 ID=LTnewLM_320030000.1:CDS:1;Parent=LTnewLM_320030000.1 ### LTnewLM_32 . polypeptide 906674 910363 . - . ID=LTnewLM_320030000.1:pep;Derives_from=LTnewLM_320030000.1;orthologous_to=LmjF.32.2310_mRNA;ortholog_cluster=OG0004862;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 911706 913019 1 - . ID=LTnewLM_320030100 LTnewLM_32 AUGUSTUS mRNA 911706 913019 1 - . ID=LTnewLM_320030100.1;Parent=LTnewLM_320030100 LTnewLM_32 AUGUSTUS CDS 911706 913019 1 - 0 ID=LTnewLM_320030100.1:CDS:1;Parent=LTnewLM_320030100.1 ### LTnewLM_32 . polypeptide 911706 913019 . - . ID=LTnewLM_320030100.1:pep;Derives_from=LTnewLM_320030100.1;orthologous_to=LmjF.32.2320_mRNA;ortholog_cluster=OG0004863;product=term%3DErgosterol biosynthesis ERG4/ERG24 family/Protein of unknown function (DUF1295)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01222|Pfam:PF06966;Ontology_term=GO:0016020 LTnewLM_32 Pfam protein_match 911712 912962 . - . Parent=LTnewLM_320030100.1:pep;Name=PF01222;signature_desc=Ergosterol biosynthesis ERG4/ERG24 family;Ontology_term=GO:0016020 LTnewLM_32 Pfam protein_match 911751 911975 . - . Parent=LTnewLM_320030100.1:pep;Name=PF06966;signature_desc=Protein of unknown function (DUF1295) ### LTnewLM_32 AUGUSTUS gene 914162 914674 1 - . ID=LTnewLM_320030200 LTnewLM_32 AUGUSTUS mRNA 914162 914674 1 - . ID=LTnewLM_320030200.1;Parent=LTnewLM_320030200 LTnewLM_32 AUGUSTUS CDS 914162 914674 1 - 0 ID=LTnewLM_320030200.1:CDS:1;Parent=LTnewLM_320030200.1 ### LTnewLM_32 . polypeptide 914162 914674 . - . ID=LTnewLM_320030200.1:pep;Derives_from=LTnewLM_320030200.1;orthologous_to=LmjF.32.2330_mRNA;ortholog_cluster=OG0004864;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 918028 919044 1 - . ID=LTnewLM_320030300 LTnewLM_32 AUGUSTUS mRNA 918028 919044 1 - . ID=LTnewLM_320030300.1;Parent=LTnewLM_320030300 LTnewLM_32 AUGUSTUS CDS 918028 919044 1 - 0 ID=LTnewLM_320030300.1:CDS:1;Parent=LTnewLM_320030300.1 ### LTnewLM_32 . polypeptide 918028 919044 . - . ID=LTnewLM_320030300.1:pep;Derives_from=LTnewLM_320030300.1;orthologous_to=LmjF.32.2340_mRNA;ortholog_cluster=OG0004865;product=term%3DOxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491 LTnewLM_32 Pfam protein_match 918394 918585 . - . Parent=LTnewLM_320030300.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_32 Pfam protein_match 918622 918912 . - . Parent=LTnewLM_320030300.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain ### LTnewLM_32 AUGUSTUS gene 920172 922106 1 - . ID=LTnewLM_320030400 LTnewLM_32 AUGUSTUS mRNA 920172 922106 1 - . ID=LTnewLM_320030400.1;Parent=LTnewLM_320030400 LTnewLM_32 AUGUSTUS CDS 920172 922106 1 - 0 ID=LTnewLM_320030400.1:CDS:1;Parent=LTnewLM_320030400.1 ### LTnewLM_32 . polypeptide 920172 922106 . - . ID=LTnewLM_320030400.1:pep;Derives_from=LTnewLM_320030400.1;orthologous_to=LmjF.32.2350_mRNA;ortholog_cluster=OG0004866;product=term%3DNsp1-like C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05064 LTnewLM_32 Pfam protein_match 920472 920768 . - . Parent=LTnewLM_320030400.1:pep;Name=PF05064;signature_desc=Nsp1-like C-terminal region ### LTnewLM_32 . pseudogene 922916 925719 . - . ID=LTnewLM_320030500:pseudogene;coverage=0.997;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.2360_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 922916 925719 . - . ID=LTnewLM_320030500.1;Parent=LTnewLM_320030500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 922916 925719 . - . ID=LTnewLM_320030500.1:pseudogenic_exon:1;Parent=LTnewLM_320030500.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 922916 925719 . - . ID=LTnewLM_320030500.1:pep;Derives_from=LTnewLM_320030500.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 927328 928164 1 - . ID=LTnewLM_320030600 LTnewLM_32 AUGUSTUS mRNA 927328 928164 1 - . ID=LTnewLM_320030600.1;Parent=LTnewLM_320030600 LTnewLM_32 AUGUSTUS CDS 927328 928164 1 - 0 ID=LTnewLM_320030600.1:CDS:1;Parent=LTnewLM_320030600.1 ### LTnewLM_32 . polypeptide 927328 928164 . - . ID=LTnewLM_320030600.1:pep;Derives_from=LTnewLM_320030600.1;orthologous_to=LmjF.32.2370_mRNA;ortholog_cluster=OG0004867;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_32 Pfam protein_match 927415 928074 . - . Parent=LTnewLM_320030600.1:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_32 . polypeptide 929246 930037 . - . ID=LTnewLM_320030700.1:pep;Derives_from=LTnewLM_320030700.1;orthologous_to=LmjF.32.2380.1_mRNA;ortholog_cluster=OG0004868;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_32 Pfam protein_match 929696 929980 . - . Parent=LTnewLM_320030700.1:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_32 . polypeptide 929246 931036 . - . ID=LTnewLM_320030700.2:pep;Derives_from=LTnewLM_320030700.2;orthologous_to=LmjF.32.2380.2_mRNA;ortholog_cluster=OG0004869;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_32 Pfam protein_match 929696 930331 . - . Parent=LTnewLM_320030700.2:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_32 Liftoff gene 929246 931298 . - . ID=LTnewLM_320030700;coverage=1.0;sequence_ID=0.931;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.32.2380_0 LTnewLM_32 Liftoff mRNA 929246 930103 . - . ID=LTnewLM_320030700.1;Parent=LTnewLM_320030700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 929246 930037 . - 0 ID=LTnewLM_320030700.1:CDS:1;Parent=LTnewLM_320030700.1;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 930038 930103 . - . ID=LTnewLM_320030700:five_prime_UTR;Parent=LTnewLM_320030700.1;extra_copy_number=0 LTnewLM_32 Liftoff mRNA 929246 931298 . - . ID=LTnewLM_320030700.2;Parent=LTnewLM_320030700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 929246 931036 . - 0 ID=LTnewLM_320030700.2:CDS:1;Parent=LTnewLM_320030700.2;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 931037 931298 . - . ID=LTnewLM_320030700:five_prime_UTR.1;Parent=LTnewLM_320030700.2;extra_copy_number=0 ### LTnewLM_32 AUGUSTUS gene 932115 933686 1 - . ID=LTnewLM_320030800 LTnewLM_32 AUGUSTUS mRNA 932115 933686 1 - . ID=LTnewLM_320030800.1;Parent=LTnewLM_320030800 LTnewLM_32 AUGUSTUS CDS 932115 933686 1 - 0 ID=LTnewLM_320030800.1:CDS:1;Parent=LTnewLM_320030800.1 ### LTnewLM_32 . polypeptide 932115 933686 . - . ID=LTnewLM_320030800.1:pep;Derives_from=LTnewLM_320030800.1;orthologous_to=LmjF.32.2390_mRNA;ortholog_cluster=OG0004870;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 935404 936471 1 - . ID=LTnewLM_320030900 LTnewLM_32 AUGUSTUS mRNA 935404 936471 1 - . ID=LTnewLM_320030900.1;Parent=LTnewLM_320030900 LTnewLM_32 AUGUSTUS CDS 935404 936471 1 - 0 ID=LTnewLM_320030900.1:CDS:1;Parent=LTnewLM_320030900.1 ### LTnewLM_32 . polypeptide 935404 936471 . - . ID=LTnewLM_320030900.1:pep;Derives_from=LTnewLM_320030900.1;orthologous_to=LmjF.32.2400_mRNA;ortholog_cluster=OG0004871;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 941449 948630 1 - . ID=LTnewLM_320031000 LTnewLM_32 AUGUSTUS mRNA 941449 948630 1 - . ID=LTnewLM_320031000.1;Parent=LTnewLM_320031000 LTnewLM_32 AUGUSTUS CDS 941449 948630 1 - 0 ID=LTnewLM_320031000.1:CDS:1;Parent=LTnewLM_320031000.1 ### LTnewLM_32 . polypeptide 941449 948630 . - . ID=LTnewLM_320031000.1:pep;Derives_from=LTnewLM_320031000.1;orthologous_to=LmjF.32.2410_mRNA;ortholog_cluster=OG0004872;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 949998 953048 1 - . ID=LTnewLM_320031100 LTnewLM_32 AUGUSTUS mRNA 949998 953048 1 - . ID=LTnewLM_320031100.1;Parent=LTnewLM_320031100 LTnewLM_32 AUGUSTUS CDS 949998 953048 1 - 0 ID=LTnewLM_320031100.1:CDS:1;Parent=LTnewLM_320031100.1 ### LTnewLM_32 . polypeptide 949998 953048 . - . ID=LTnewLM_320031100.1:pep;Derives_from=LTnewLM_320031100.1;orthologous_to=LmjF.32.2420_mRNA;ortholog_cluster=OG0004873;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 953601 954845 1 - . ID=LTnewLM_320031200 LTnewLM_32 AUGUSTUS mRNA 953601 954845 1 - . ID=LTnewLM_320031200.1;Parent=LTnewLM_320031200 LTnewLM_32 AUGUSTUS CDS 953601 954845 1 - 0 ID=LTnewLM_320031200.1:CDS:1;Parent=LTnewLM_320031200.1 ### LTnewLM_32 . polypeptide 953601 954845 . - . ID=LTnewLM_320031200.1:pep;Derives_from=LTnewLM_320031200.1;orthologous_to=LmjF.32.2430_mRNA;ortholog_cluster=OG0004874;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_32 Pfam protein_match 953850 954335 . - . Parent=LTnewLM_320031200.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_32 AUGUSTUS gene 955783 957225 1 - . ID=LTnewLM_320031300 LTnewLM_32 AUGUSTUS mRNA 955783 957225 1 - . ID=LTnewLM_320031300.1;Parent=LTnewLM_320031300 LTnewLM_32 AUGUSTUS CDS 955783 957225 1 - 0 ID=LTnewLM_320031300.1:CDS:1;Parent=LTnewLM_320031300.1 ### LTnewLM_32 . polypeptide 955783 957225 . - . ID=LTnewLM_320031300.1:pep;Derives_from=LTnewLM_320031300.1;orthologous_to=LmjF.32.2440_mRNA;ortholog_cluster=OG0004875;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 958573 959643 1 - . ID=LTnewLM_320031400 LTnewLM_32 AUGUSTUS mRNA 958573 959643 1 - . ID=LTnewLM_320031400.1;Parent=LTnewLM_320031400 LTnewLM_32 AUGUSTUS CDS 958573 959643 1 - 0 ID=LTnewLM_320031400.1:CDS:1;Parent=LTnewLM_320031400.1 ### LTnewLM_32 . polypeptide 958573 959643 . - . ID=LTnewLM_320031400.1:pep;Derives_from=LTnewLM_320031400.1;orthologous_to=LmjF.32.2450_mRNA;ortholog_cluster=OG0004876;product=term%3DCid1 family poly A polymerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03828 LTnewLM_32 Pfam protein_match 958711 958905 . - . Parent=LTnewLM_320031400.1:pep;Name=PF03828;signature_desc=Cid1 family poly A polymerase ### LTnewLM_32 AUGUSTUS gene 960685 963618 1 - . ID=LTnewLM_320031500 LTnewLM_32 AUGUSTUS mRNA 960685 963618 1 - . ID=LTnewLM_320031500.1;Parent=LTnewLM_320031500 LTnewLM_32 AUGUSTUS CDS 960685 963618 1 - 0 ID=LTnewLM_320031500.1:CDS:1;Parent=LTnewLM_320031500.1 ### LTnewLM_32 . polypeptide 960685 963618 . - . ID=LTnewLM_320031500.1:pep;Derives_from=LTnewLM_320031500.1;orthologous_to=LmjF.32.2460_mRNA;ortholog_cluster=OG0004877;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 965387 965605 1 - . ID=LTnewLM_320031600 LTnewLM_32 AUGUSTUS mRNA 965387 965605 1 - . ID=LTnewLM_320031600.1;Parent=LTnewLM_320031600 LTnewLM_32 AUGUSTUS CDS 965387 965605 1 - 0 ID=LTnewLM_320031600.1:CDS:1;Parent=LTnewLM_320031600.1 ### LTnewLM_32 . polypeptide 965387 965605 . - . ID=LTnewLM_320031600.1:pep;Derives_from=LTnewLM_320031600.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 970611 971015 1 - . ID=LTnewLM_320031700 LTnewLM_32 AUGUSTUS mRNA 970611 971015 1 - . ID=LTnewLM_320031700.1;Parent=LTnewLM_320031700 LTnewLM_32 AUGUSTUS CDS 970611 971015 1 - 0 ID=LTnewLM_320031700.1:CDS:1;Parent=LTnewLM_320031700.1 ### LTnewLM_32 . polypeptide 970611 971015 . - . ID=LTnewLM_320031700.1:pep;Derives_from=LTnewLM_320031700.1;orthologous_to=LmjF.32.2480_mRNA;ortholog_cluster=OG0004878;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 971701 975573 1 - . ID=LTnewLM_320031800 LTnewLM_32 AUGUSTUS mRNA 971701 975573 1 - . ID=LTnewLM_320031800.1;Parent=LTnewLM_320031800 LTnewLM_32 AUGUSTUS CDS 971701 975573 1 - 0 ID=LTnewLM_320031800.1:CDS:1;Parent=LTnewLM_320031800.1 ### LTnewLM_32 . polypeptide 971701 975573 . - . ID=LTnewLM_320031800.1:pep;Derives_from=LTnewLM_320031800.1;orthologous_to=LmjF.32.2490_mRNA;ortholog_cluster=OG0004879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 976845 977333 1 - . ID=LTnewLM_320031900 LTnewLM_32 AUGUSTUS mRNA 976845 977333 1 - . ID=LTnewLM_320031900.1;Parent=LTnewLM_320031900 LTnewLM_32 AUGUSTUS CDS 976845 977333 1 - 0 ID=LTnewLM_320031900.1:CDS:1;Parent=LTnewLM_320031900.1 ### LTnewLM_32 . polypeptide 976845 977333 . - . ID=LTnewLM_320031900.1:pep;Derives_from=LTnewLM_320031900.1;orthologous_to=LmjF.32.2500_mRNA;ortholog_cluster=OG0004880;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 978319 979125 1 - . ID=LTnewLM_320032000 LTnewLM_32 AUGUSTUS mRNA 978319 979125 1 - . ID=LTnewLM_320032000.1;Parent=LTnewLM_320032000 LTnewLM_32 AUGUSTUS CDS 978319 979125 1 - 0 ID=LTnewLM_320032000.1:CDS:1;Parent=LTnewLM_320032000.1 ### LTnewLM_32 . polypeptide 978319 979125 . - . ID=LTnewLM_320032000.1:pep;Derives_from=LTnewLM_320032000.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 980092 982089 1 - . ID=LTnewLM_320032100 LTnewLM_32 AUGUSTUS mRNA 980092 982089 1 - . ID=LTnewLM_320032100.1;Parent=LTnewLM_320032100 LTnewLM_32 AUGUSTUS CDS 980092 982089 1 - 0 ID=LTnewLM_320032100.1:CDS:1;Parent=LTnewLM_320032100.1 ### LTnewLM_32 . polypeptide 980092 982089 . - . ID=LTnewLM_320032100.1:pep;Derives_from=LTnewLM_320032100.1;orthologous_to=LmjF.32.2510_mRNA;ortholog_cluster=OG0004881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 983290 986052 1 - . ID=LTnewLM_320032200 LTnewLM_32 AUGUSTUS mRNA 983290 986052 1 - . ID=LTnewLM_320032200.1;Parent=LTnewLM_320032200 LTnewLM_32 AUGUSTUS CDS 983290 986052 1 - 0 ID=LTnewLM_320032200.1:CDS:1;Parent=LTnewLM_320032200.1 ### LTnewLM_32 . polypeptide 983290 986052 . - . ID=LTnewLM_320032200.1:pep;Derives_from=LTnewLM_320032200.1;orthologous_to=LmjF.32.2520_mRNA;ortholog_cluster=OG0004882;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 989472 992348 1 - . ID=LTnewLM_320032300 LTnewLM_32 AUGUSTUS mRNA 989472 992348 1 - . ID=LTnewLM_320032300.1;Parent=LTnewLM_320032300 LTnewLM_32 AUGUSTUS CDS 989472 992348 1 - 0 ID=LTnewLM_320032300.1:CDS:1;Parent=LTnewLM_320032300.1 ### LTnewLM_32 . polypeptide 989472 992348 . - . ID=LTnewLM_320032300.1:pep;Derives_from=LTnewLM_320032300.1;orthologous_to=LmjF.32.2530_mRNA;ortholog_cluster=OG0004883;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 993573 995594 1 - . ID=LTnewLM_320032400 LTnewLM_32 AUGUSTUS mRNA 993573 995594 1 - . ID=LTnewLM_320032400.1;Parent=LTnewLM_320032400 LTnewLM_32 AUGUSTUS CDS 993573 995594 1 - 0 ID=LTnewLM_320032400.1:CDS:1;Parent=LTnewLM_320032400.1 ### LTnewLM_32 . polypeptide 993573 995594 . - . ID=LTnewLM_320032400.1:pep;Derives_from=LTnewLM_320032400.1;orthologous_to=LmjF.32.2540_mRNA;ortholog_cluster=OG0004884;product=term%3DHD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01966 LTnewLM_32 Pfam protein_match 995082 995372 . - . Parent=LTnewLM_320032400.1:pep;Name=PF01966;signature_desc=HD domain ### LTnewLM_32 AUGUSTUS gene 996779 1001617 1 - . ID=LTnewLM_320032500 LTnewLM_32 AUGUSTUS mRNA 996779 1001617 1 - . ID=LTnewLM_320032500.1;Parent=LTnewLM_320032500 LTnewLM_32 AUGUSTUS CDS 996779 1001617 1 - 0 ID=LTnewLM_320032500.1:CDS:1;Parent=LTnewLM_320032500.1 ### LTnewLM_32 . polypeptide 996779 1001617 . - . ID=LTnewLM_320032500.1:pep;Derives_from=LTnewLM_320032500.1;orthologous_to=LmjF.32.2550_mRNA;ortholog_cluster=OG0004885;product=term%3DAMP deaminase/Adenosine deaminase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19326|Pfam:PF00962;Ontology_term=GO:0019239 LTnewLM_32 Pfam protein_match 997460 998938 . - . Parent=LTnewLM_320032500.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_32 Pfam protein_match 997604 997930 . - . Parent=LTnewLM_320032500.1:pep;Name=PF00962;signature_desc=Adenosine deaminase;Ontology_term=GO:0019239 LTnewLM_32 Pfam protein_match 999380 999982 . - . Parent=LTnewLM_320032500.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_32 Pfam protein_match 1000187 1001011 . - . Parent=LTnewLM_320032500.1:pep;Name=PF19326;signature_desc=AMP deaminase ### LTnewLM_32 AUGUSTUS gene 1002801 1004057 1 - . ID=LTnewLM_320032600 LTnewLM_32 AUGUSTUS mRNA 1002801 1004057 1 - . ID=LTnewLM_320032600.1;Parent=LTnewLM_320032600 LTnewLM_32 AUGUSTUS CDS 1002801 1004057 1 - 0 ID=LTnewLM_320032600.1:CDS:1;Parent=LTnewLM_320032600.1 ### LTnewLM_32 . polypeptide 1002801 1004057 . - . ID=LTnewLM_320032600.1:pep;Derives_from=LTnewLM_320032600.1;orthologous_to=LmjF.32.2560_mRNA;ortholog_cluster=OG0004886;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1004699 1007518 1 - . ID=LTnewLM_320032700 LTnewLM_32 AUGUSTUS mRNA 1004699 1007518 1 - . ID=LTnewLM_320032700.1;Parent=LTnewLM_320032700 LTnewLM_32 AUGUSTUS CDS 1004699 1007518 1 - 0 ID=LTnewLM_320032700.1:CDS:1;Parent=LTnewLM_320032700.1 ### LTnewLM_32 . polypeptide 1004699 1007518 . - . ID=LTnewLM_320032700.1:pep;Derives_from=LTnewLM_320032700.1;orthologous_to=LmjF.32.2570_mRNA;ortholog_cluster=OG0004887;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1008598 1009704 1.31 - . ID=LTnewLM_320032800 LTnewLM_32 AUGUSTUS mRNA 1008598 1009704 1 - . ID=LTnewLM_320032800.1;Parent=LTnewLM_320032800 LTnewLM_32 AUGUSTUS CDS 1008598 1009704 1 - 0 ID=LTnewLM_320032800.1:CDS:1;Parent=LTnewLM_320032800.1 LTnewLM_32 AUGUSTUS mRNA 1009146 1009704 0.31 - . ID=LTnewLM_320032800.2;Parent=LTnewLM_320032800 LTnewLM_32 AUGUSTUS CDS 1009146 1009172 0.32 - 0 ID=LTnewLM_320032800.2:CDS:1;Parent=LTnewLM_320032800.2 LTnewLM_32 AUGUSTUS CDS 1009267 1009704 0.47 - 0 ID=LTnewLM_320032800.2:CDS:2;Parent=LTnewLM_320032800.2 ### LTnewLM_32 . polypeptide 1008598 1009704 . - . ID=LTnewLM_320032800.1:pep;Derives_from=LTnewLM_320032800.1;orthologous_to=LTnewLM_320032800.2,LmjF.32.2580_mRNA;ortholog_cluster=OG0000444;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . polypeptide 1009146 1009704 . - . ID=LTnewLM_320032800.2:pep;Derives_from=LTnewLM_320032800.2;orthologous_to=LTnewLM_320032800.1,LmjF.32.2580_mRNA;ortholog_cluster=OG0000444;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1011105 1011503 1 - . ID=LTnewLM_320032900 LTnewLM_32 AUGUSTUS mRNA 1011105 1011503 1 - . ID=LTnewLM_320032900.1;Parent=LTnewLM_320032900 LTnewLM_32 AUGUSTUS CDS 1011105 1011503 1 - 0 ID=LTnewLM_320032900.1:CDS:1;Parent=LTnewLM_320032900.1 ### LTnewLM_32 . polypeptide 1011105 1011503 . - . ID=LTnewLM_320032900.1:pep;Derives_from=LTnewLM_320032900.1;orthologous_to=LmjF.32.2590_mRNA;ortholog_cluster=OG0004888;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1012679 1014589 1 - . ID=LTnewLM_320033000 LTnewLM_32 AUGUSTUS mRNA 1012679 1014589 1 - . ID=LTnewLM_320033000.1;Parent=LTnewLM_320033000 LTnewLM_32 AUGUSTUS CDS 1012679 1014589 1 - 0 ID=LTnewLM_320033000.1:CDS:1;Parent=LTnewLM_320033000.1 ### LTnewLM_32 . polypeptide 1012679 1014589 . - . ID=LTnewLM_320033000.1:pep;Derives_from=LTnewLM_320033000.1;orthologous_to=LmjF.32.2600_mRNA;ortholog_cluster=OG0004889;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1017692 1020706 1 - . ID=LTnewLM_320033100 LTnewLM_32 AUGUSTUS mRNA 1017692 1020706 1 - . ID=LTnewLM_320033100.1;Parent=LTnewLM_320033100 LTnewLM_32 AUGUSTUS CDS 1017692 1020706 1 - 0 ID=LTnewLM_320033100.1:CDS:1;Parent=LTnewLM_320033100.1 ### LTnewLM_32 . polypeptide 1017692 1020706 . - . ID=LTnewLM_320033100.1:pep;Derives_from=LTnewLM_320033100.1;orthologous_to=LmjF.32.2610_mRNA;ortholog_cluster=OG0004890;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1022554 1023462 1 - . ID=LTnewLM_320033200 LTnewLM_32 AUGUSTUS mRNA 1022554 1023462 1 - . ID=LTnewLM_320033200.1;Parent=LTnewLM_320033200 LTnewLM_32 AUGUSTUS CDS 1022554 1023462 1 - 0 ID=LTnewLM_320033200.1:CDS:1;Parent=LTnewLM_320033200.1 ### LTnewLM_32 . polypeptide 1022554 1023462 . - . ID=LTnewLM_320033200.1:pep;Derives_from=LTnewLM_320033200.1;orthologous_to=LmjF.32.2620_mRNA;ortholog_cluster=OG0004891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1025150 1026091 1 - . ID=LTnewLM_320033300 LTnewLM_32 AUGUSTUS mRNA 1025150 1026091 1 - . ID=LTnewLM_320033300.1;Parent=LTnewLM_320033300 LTnewLM_32 AUGUSTUS CDS 1025150 1026091 1 - 0 ID=LTnewLM_320033300.1:CDS:1;Parent=LTnewLM_320033300.1 ### LTnewLM_32 . polypeptide 1025150 1026091 . - . ID=LTnewLM_320033300.1:pep;Derives_from=LTnewLM_320033300.1;orthologous_to=LmjF.32.2630_mRNA;ortholog_cluster=OG0004892;product=term%3DIron/manganese superoxide dismutases%2C alpha-hairpin domain/Iron/manganese superoxide dismutases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00081|Pfam:PF02777;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784 LTnewLM_32 Pfam protein_match 1025204 1025500 . - . Parent=LTnewLM_320033300.1:pep;Name=PF02777;signature_desc=Iron/manganese superoxide dismutases%2C C-terminal domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 LTnewLM_32 Pfam protein_match 1025531 1025782 . - . Parent=LTnewLM_320033300.1:pep;Name=PF00081;signature_desc=Iron/manganese superoxide dismutases%2C alpha-hairpin domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 ### LTnewLM_32 . polypeptide 1033081 1034280 . - . ID=LTnewLM_320033400.1:pep;Derives_from=LTnewLM_320033400.1;orthologous_to=LTnewLM_320033400.2,LTnewLM_330024200.1,LmjF.32.2640.1_mRNA,LmjF.32.2640.2_mRNA;ortholog_cluster=OG0000098;product=term%3DCys/Met metabolism PLP-dependent enzyme/Aminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01053|Pfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_32 Pfam protein_match 1033117 1034244 . - . Parent=LTnewLM_320033400.1:pep;Name=PF01053;signature_desc=Cys/Met metabolism PLP-dependent enzyme;Ontology_term=GO:0030170 LTnewLM_32 Pfam protein_match 1033714 1034070 . - . Parent=LTnewLM_320033400.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_32 . polypeptide 1033081 1034469 . - . ID=LTnewLM_320033400.2:pep;Derives_from=LTnewLM_320033400.2;orthologous_to=LTnewLM_320033400.1,LTnewLM_330024200.1,LmjF.32.2640.1_mRNA,LmjF.32.2640.2_mRNA;ortholog_cluster=OG0000098;product=term%3DCys/Met metabolism PLP-dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01053;Ontology_term=GO:0030170 LTnewLM_32 Pfam protein_match 1033117 1034244 . - . Parent=LTnewLM_320033400.2:pep;Name=PF01053;signature_desc=Cys/Met metabolism PLP-dependent enzyme;Ontology_term=GO:0030170 ### LTnewLM_32 Liftoff gene 1033081 1035538 . - . ID=LTnewLM_320033400;coverage=0.997;sequence_ID=0.938;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.32.2640_0 LTnewLM_32 Liftoff mRNA 1033081 1034413 . - . ID=LTnewLM_320033400.1;Parent=LTnewLM_320033400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1033081 1034280 . - 0 ID=LTnewLM_320033400.1:CDS:1;Parent=LTnewLM_320033400.1;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 1034281 1034413 . - . ID=LTnewLM_320033400:five_prime_UTR;Parent=LTnewLM_320033400.1;extra_copy_number=0 LTnewLM_32 Liftoff mRNA 1033081 1035538 . - . ID=LTnewLM_320033400.2;Parent=LTnewLM_320033400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1033081 1034469 . - 0 ID=LTnewLM_320033400.2:CDS:1;Parent=LTnewLM_320033400.2;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 1034470 1035538 . - . ID=LTnewLM_320033400:five_prime_UTR.1;Parent=LTnewLM_320033400.2;extra_copy_number=0 ### LTnewLM_32 AUGUSTUS gene 1036621 1042758 1 - . ID=LTnewLM_320033500 LTnewLM_32 AUGUSTUS mRNA 1036621 1042758 1 - . ID=LTnewLM_320033500.1;Parent=LTnewLM_320033500 LTnewLM_32 AUGUSTUS CDS 1036621 1042758 1 - 0 ID=LTnewLM_320033500.1:CDS:1;Parent=LTnewLM_320033500.1 ### LTnewLM_32 . polypeptide 1036621 1042758 . - . ID=LTnewLM_320033500.1:pep;Derives_from=LTnewLM_320033500.1;orthologous_to=LmjF.32.2650_mRNA;ortholog_cluster=OG0004893;product=term%3DSpoU rRNA Methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00588;Ontology_term=GO:0003723,GO:0008173,GO:0006396 LTnewLM_32 Pfam protein_match 1036672 1037097 . - . Parent=LTnewLM_320033500.1:pep;Name=PF00588;signature_desc=SpoU rRNA Methylase family;Ontology_term=GO:0003723,GO:0008173,GO:0006396 ### LTnewLM_32 AUGUSTUS gene 1043361 1044116 1 - . ID=LTnewLM_320033600 LTnewLM_32 AUGUSTUS mRNA 1043361 1044116 1 - . ID=LTnewLM_320033600.1;Parent=LTnewLM_320033600 LTnewLM_32 AUGUSTUS CDS 1043361 1044116 1 - 0 ID=LTnewLM_320033600.1:CDS:1;Parent=LTnewLM_320033600.1 ### LTnewLM_32 . polypeptide 1043361 1044116 . - . ID=LTnewLM_320033600.1:pep;Derives_from=LTnewLM_320033600.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 1047809 1049269 1 - . ID=LTnewLM_320033700 LTnewLM_32 AUGUSTUS mRNA 1047809 1049269 1 - . ID=LTnewLM_320033700.1;Parent=LTnewLM_320033700 LTnewLM_32 AUGUSTUS CDS 1047809 1049269 1 - 0 ID=LTnewLM_320033700.1:CDS:1;Parent=LTnewLM_320033700.1 ### LTnewLM_32 . polypeptide 1047809 1049269 . - . ID=LTnewLM_320033700.1:pep;Derives_from=LTnewLM_320033700.1;orthologous_to=LmjF.32.2660_mRNA;ortholog_cluster=OG0004894;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_32 Pfam protein_match 1047830 1048990 . - . Parent=LTnewLM_320033700.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_32 Pfam protein_match 1048514 1048984 . - . Parent=LTnewLM_320033700.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_32 AUGUSTUS gene 1050473 1052992 1 - . ID=LTnewLM_320033800 LTnewLM_32 AUGUSTUS mRNA 1050473 1052992 1 - . ID=LTnewLM_320033800.1;Parent=LTnewLM_320033800 LTnewLM_32 AUGUSTUS CDS 1050473 1052992 1 - 0 ID=LTnewLM_320033800.1:CDS:1;Parent=LTnewLM_320033800.1 ### LTnewLM_32 . polypeptide 1050473 1052992 . - . ID=LTnewLM_320033800.1:pep;Derives_from=LTnewLM_320033800.1;orthologous_to=LmjF.32.2670_mRNA;ortholog_cluster=OG0004895;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1055509 1056663 1 - . ID=LTnewLM_320033900 LTnewLM_32 AUGUSTUS mRNA 1055509 1056663 1 - . ID=LTnewLM_320033900.1;Parent=LTnewLM_320033900 LTnewLM_32 AUGUSTUS CDS 1055509 1056663 1 - 0 ID=LTnewLM_320033900.1:CDS:1;Parent=LTnewLM_320033900.1 ### LTnewLM_32 . polypeptide 1055509 1056663 . - . ID=LTnewLM_320033900.1:pep;Derives_from=LTnewLM_320033900.1;orthologous_to=LmjF.32.2680_mRNA;ortholog_cluster=OG0004896;product=term%3DVAD1 Analog of StAR-related lipid transfer domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16016 LTnewLM_32 Pfam protein_match 1056139 1056507 . - . Parent=LTnewLM_320033900.1:pep;Name=PF16016;signature_desc=VAD1 Analog of StAR-related lipid transfer domain ### LTnewLM_32 AUGUSTUS gene 1058091 1058495 1 - . ID=LTnewLM_320034000 LTnewLM_32 AUGUSTUS mRNA 1058091 1058495 1 - . ID=LTnewLM_320034000.1;Parent=LTnewLM_320034000 LTnewLM_32 AUGUSTUS CDS 1058091 1058495 1 - 0 ID=LTnewLM_320034000.1:CDS:1;Parent=LTnewLM_320034000.1 ### LTnewLM_32 . polypeptide 1058091 1058495 . - . ID=LTnewLM_320034000.1:pep;Derives_from=LTnewLM_320034000.1;orthologous_to=LTnewLM_320034200.1,LmjF.32.2690_mRNA,LmjF.32.2710_mRNA;ortholog_cluster=OG0000234;product=term%3DKOW motif/Ribosomal L27e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00467|Pfam:PF01777;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_32 Pfam protein_match 1058097 1058342 . - . Parent=LTnewLM_320034000.1:pep;Name=PF01777;signature_desc=Ribosomal L27e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_32 Pfam protein_match 1058418 1058477 . - . Parent=LTnewLM_320034000.1:pep;Name=PF00467;signature_desc=KOW motif ### LTnewLM_32 AUGUSTUS gene 1059417 1062803 1 - . ID=LTnewLM_320034100 LTnewLM_32 AUGUSTUS mRNA 1059417 1062803 1 - . ID=LTnewLM_320034100.1;Parent=LTnewLM_320034100 LTnewLM_32 AUGUSTUS CDS 1059417 1062803 1 - 0 ID=LTnewLM_320034100.1:CDS:1;Parent=LTnewLM_320034100.1 ### LTnewLM_32 . polypeptide 1059417 1062803 . - . ID=LTnewLM_320034100.1:pep;Derives_from=LTnewLM_320034100.1;orthologous_to=LmjF.32.2700_mRNA;ortholog_cluster=OG0004897;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1064409 1064813 1 - . ID=LTnewLM_320034200 LTnewLM_32 AUGUSTUS mRNA 1064409 1064813 1 - . ID=LTnewLM_320034200.1;Parent=LTnewLM_320034200 LTnewLM_32 AUGUSTUS CDS 1064409 1064813 1 - 0 ID=LTnewLM_320034200.1:CDS:1;Parent=LTnewLM_320034200.1 ### LTnewLM_32 . polypeptide 1064409 1064813 . - . ID=LTnewLM_320034200.1:pep;Derives_from=LTnewLM_320034200.1;orthologous_to=LTnewLM_320034000.1,LmjF.32.2690_mRNA,LmjF.32.2710_mRNA;ortholog_cluster=OG0000234;product=term%3DKOW motif/Ribosomal L27e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00467|Pfam:PF01777;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_32 Pfam protein_match 1064415 1064660 . - . Parent=LTnewLM_320034200.1:pep;Name=PF01777;signature_desc=Ribosomal L27e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_32 Pfam protein_match 1064736 1064795 . - . Parent=LTnewLM_320034200.1:pep;Name=PF00467;signature_desc=KOW motif ### LTnewLM_32 AUGUSTUS gene 1065770 1066219 1 - . ID=LTnewLM_320034300 LTnewLM_32 AUGUSTUS mRNA 1065770 1066219 1 - . ID=LTnewLM_320034300.1;Parent=LTnewLM_320034300 LTnewLM_32 AUGUSTUS CDS 1065770 1066219 1 - 0 ID=LTnewLM_320034300.1:CDS:1;Parent=LTnewLM_320034300.1 ### LTnewLM_32 . polypeptide 1065770 1066219 . - . ID=LTnewLM_320034300.1:pep;Derives_from=LTnewLM_320034300.1;orthologous_to=LmjF.32.2720_mRNA;ortholog_cluster=OG0004898;product=term%3DSybindin-like family/Sedlin%2C N-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04099|Pfam:PF04628;Ontology_term=GO:0005801,GO:0005622,GO:0006888 LTnewLM_32 Pfam protein_match 1065791 1066018 . - . Parent=LTnewLM_320034300.1:pep;Name=PF04628;signature_desc=Sedlin%2C N-terminal conserved region;Ontology_term=GO:0006888,GO:0005622 LTnewLM_32 Pfam protein_match 1065791 1066213 . - . Parent=LTnewLM_320034300.1:pep;Name=PF04099;signature_desc=Sybindin-like family;Ontology_term=GO:0006888,GO:0005801 ### LTnewLM_32 AUGUSTUS gene 1067025 1070144 1 - . ID=LTnewLM_320034400 LTnewLM_32 AUGUSTUS mRNA 1067025 1070144 1 - . ID=LTnewLM_320034400.1;Parent=LTnewLM_320034400 LTnewLM_32 AUGUSTUS CDS 1067025 1070144 1 - 0 ID=LTnewLM_320034400.1:CDS:1;Parent=LTnewLM_320034400.1 ### LTnewLM_32 . polypeptide 1067025 1070144 . - . ID=LTnewLM_320034400.1:pep;Derives_from=LTnewLM_320034400.1;orthologous_to=LmjF.32.2730_mRNA;ortholog_cluster=OG0004899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1071228 1071611 1 - . ID=LTnewLM_320034500 LTnewLM_32 AUGUSTUS mRNA 1071228 1071611 1 - . ID=LTnewLM_320034500.1;Parent=LTnewLM_320034500 LTnewLM_32 AUGUSTUS CDS 1071228 1071611 1 - 0 ID=LTnewLM_320034500.1:CDS:1;Parent=LTnewLM_320034500.1 ### LTnewLM_32 . polypeptide 1071228 1071611 . - . ID=LTnewLM_320034500.1:pep;Derives_from=LTnewLM_320034500.1;orthologous_to=LmjF.32.2740_mRNA;ortholog_cluster=OG0004900;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_32 Pfam protein_match 1071273 1071584 . - . Parent=LTnewLM_320034500.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_32 AUGUSTUS gene 1073161 1077732 1 - . ID=LTnewLM_320034600 LTnewLM_32 AUGUSTUS mRNA 1073161 1077732 1 - . ID=LTnewLM_320034600.1;Parent=LTnewLM_320034600 LTnewLM_32 AUGUSTUS CDS 1073161 1077732 1 - 0 ID=LTnewLM_320034600.1:CDS:1;Parent=LTnewLM_320034600.1 ### LTnewLM_32 . polypeptide 1073161 1077732 . - . ID=LTnewLM_320034600.1:pep;Derives_from=LTnewLM_320034600.1;orthologous_to=LmjF.32.2750_mRNA;ortholog_cluster=OG0004901;product=term%3DGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12783|Pfam:PF01369;Ontology_term=GO:0005086,GO:0032012 LTnewLM_32 Pfam protein_match 1074079 1074690 . - . Parent=LTnewLM_320034600.1:pep;Name=PF01369;signature_desc=Sec7 domain;Ontology_term=GO:0005086,GO:0032012 LTnewLM_32 Pfam protein_match 1075255 1075734 . - . Parent=LTnewLM_320034600.1:pep;Name=PF12783;signature_desc=Guanine nucleotide exchange factor in Golgi transport N-terminal ### LTnewLM_32 AUGUSTUS gene 1078874 1081519 1 - . ID=LTnewLM_320034700 LTnewLM_32 AUGUSTUS mRNA 1078874 1081519 1 - . ID=LTnewLM_320034700.1;Parent=LTnewLM_320034700 LTnewLM_32 AUGUSTUS CDS 1078874 1081519 1 - 0 ID=LTnewLM_320034700.1:CDS:1;Parent=LTnewLM_320034700.1 ### LTnewLM_32 . polypeptide 1078874 1081519 . - . ID=LTnewLM_320034700.1:pep;Derives_from=LTnewLM_320034700.1;orthologous_to=LmjF.32.2760_mRNA;ortholog_cluster=OG0004902;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . polypeptide 1085748 1088621 . - . ID=LTnewLM_320034800.1:pep;Derives_from=LTnewLM_320034800.1;orthologous_to=LmjF.32.2770.1_mRNA,LmjF.32.2770.2_mRNA;ortholog_cluster=OG0000539;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . polypeptide 1085748 1089067 . - . ID=LTnewLM_320034800.2:pep;Derives_from=LTnewLM_320034800.2;product=term%3Dhypothetical protein ### LTnewLM_32 . pseudogene 1085748 1089478 . - . ID=LTnewLM_320034800:pseudogene;coverage=0.983;sequence_ID=0.908;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.2770_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1085748 1088998 . - . ID=LTnewLM_320034800.1;Parent=LTnewLM_320034800:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1085748 1088621 . - . ID=LTnewLM_320034800.1:pseudogenic_exon:1;Parent=LTnewLM_320034800.1;extra_copy_number=0 LTnewLM_32 . pseudogenic_transcript 1085748 1089478 . - . ID=LTnewLM_320034800.2;Parent=LTnewLM_320034800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1085748 1089067 . - . ID=LTnewLM_320034800.2:pseudogenic_exon:1;Parent=LTnewLM_320034800.2;extra_copy_number=0 ### LTnewLM_32 AUGUSTUS gene 1090618 1093899 1 - . ID=LTnewLM_320034900 LTnewLM_32 AUGUSTUS mRNA 1090618 1093899 1 - . ID=LTnewLM_320034900.1;Parent=LTnewLM_320034900 LTnewLM_32 AUGUSTUS CDS 1090618 1093899 1 - 0 ID=LTnewLM_320034900.1:CDS:1;Parent=LTnewLM_320034900.1 ### LTnewLM_32 . polypeptide 1090618 1093899 . - . ID=LTnewLM_320034900.1:pep;Derives_from=LTnewLM_320034900.1;orthologous_to=LmjF.32.2780_mRNA;ortholog_cluster=OG0004903;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1094590 1095804 1 - . ID=LTnewLM_320035000 LTnewLM_32 AUGUSTUS mRNA 1094590 1095804 1 - . ID=LTnewLM_320035000.1;Parent=LTnewLM_320035000 LTnewLM_32 AUGUSTUS CDS 1094590 1095804 1 - 0 ID=LTnewLM_320035000.1:CDS:1;Parent=LTnewLM_320035000.1 ### LTnewLM_32 . polypeptide 1094590 1095804 . - . ID=LTnewLM_320035000.1:pep;Derives_from=LTnewLM_320035000.1;orthologous_to=LmjF.32.2790_mRNA;ortholog_cluster=OG0004904;product=term%3DExonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00929 LTnewLM_32 Pfam protein_match 1094641 1095312 . - . Parent=LTnewLM_320035000.1:pep;Name=PF00929;signature_desc=Exonuclease ### LTnewLM_32 AUGUSTUS gene 1097372 1101457 1 - . ID=LTnewLM_320035100 LTnewLM_32 AUGUSTUS mRNA 1097372 1101457 1 - . ID=LTnewLM_320035100.1;Parent=LTnewLM_320035100 LTnewLM_32 AUGUSTUS CDS 1097372 1101457 1 - 0 ID=LTnewLM_320035100.1:CDS:1;Parent=LTnewLM_320035100.1 ### LTnewLM_32 . polypeptide 1097372 1101457 . - . ID=LTnewLM_320035100.1:pep;Derives_from=LTnewLM_320035100.1;orthologous_to=LmjF.32.2800_mRNA;ortholog_cluster=OG0004905;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1103142 1104488 1 - . ID=LTnewLM_320035200 LTnewLM_32 AUGUSTUS mRNA 1103142 1104488 1 - . ID=LTnewLM_320035200.1;Parent=LTnewLM_320035200 LTnewLM_32 AUGUSTUS CDS 1103142 1104488 1 - 0 ID=LTnewLM_320035200.1:CDS:1;Parent=LTnewLM_320035200.1 ### LTnewLM_32 . polypeptide 1103142 1104488 . - . ID=LTnewLM_320035200.1:pep;Derives_from=LTnewLM_320035200.1;orthologous_to=LmjF.32.2810_mRNA;ortholog_cluster=OG0004906;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 1103319 1103441 . - . Parent=LTnewLM_320035200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 1104000 1104149 . - . Parent=LTnewLM_320035200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_32 AUGUSTUS gene 1106020 1107246 1 - . ID=LTnewLM_320035300 LTnewLM_32 AUGUSTUS mRNA 1106020 1107246 1 - . ID=LTnewLM_320035300.1;Parent=LTnewLM_320035300 LTnewLM_32 AUGUSTUS CDS 1106020 1107246 1 - 0 ID=LTnewLM_320035300.1:CDS:1;Parent=LTnewLM_320035300.1 ### LTnewLM_32 . polypeptide 1106020 1107246 . - . ID=LTnewLM_320035300.1:pep;Derives_from=LTnewLM_320035300.1;orthologous_to=LmjF.32.2820_mRNA;ortholog_cluster=OG0004907;product=term%3D26S proteasome subunit RPN7/PCI domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10602|Pfam:PF01399;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1106128 1106427 . - . Parent=LTnewLM_320035300.1:pep;Name=PF01399;signature_desc=PCI domain;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1106473 1106985 . - . Parent=LTnewLM_320035300.1:pep;Name=PF10602;signature_desc=26S proteasome subunit RPN7 ### LTnewLM_32 AUGUSTUS gene 1108893 1112333 1 - . ID=LTnewLM_320035400 LTnewLM_32 AUGUSTUS mRNA 1108893 1112333 1 - . ID=LTnewLM_320035400.1;Parent=LTnewLM_320035400 LTnewLM_32 AUGUSTUS CDS 1108893 1112333 1 - 0 ID=LTnewLM_320035400.1:CDS:1;Parent=LTnewLM_320035400.1 ### LTnewLM_32 . polypeptide 1108893 1112333 . - . ID=LTnewLM_320035400.1:pep;Derives_from=LTnewLM_320035400.1;orthologous_to=LmjF.32.2830_mRNA;ortholog_cluster=OG0004908;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1113244 1114956 1 - . ID=LTnewLM_320035500 LTnewLM_32 AUGUSTUS mRNA 1113244 1114956 1 - . ID=LTnewLM_320035500.1;Parent=LTnewLM_320035500 LTnewLM_32 AUGUSTUS CDS 1113244 1114956 1 - 0 ID=LTnewLM_320035500.1:CDS:1;Parent=LTnewLM_320035500.1 ### LTnewLM_32 . polypeptide 1113244 1114956 . - . ID=LTnewLM_320035500.1:pep;Derives_from=LTnewLM_320035500.1;orthologous_to=LmjF.32.2840_mRNA;ortholog_cluster=OG0004909;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02996 LTnewLM_32 Pfam protein_match 1114570 1114893 . - . Parent=LTnewLM_320035500.1:pep;Name=PF02996;signature_desc=Prefoldin subunit ### LTnewLM_32 AUGUSTUS gene 1116204 1118117 1 - . ID=LTnewLM_320035600 LTnewLM_32 AUGUSTUS mRNA 1116204 1118117 1 - . ID=LTnewLM_320035600.1;Parent=LTnewLM_320035600 LTnewLM_32 AUGUSTUS CDS 1116204 1118117 1 - 0 ID=LTnewLM_320035600.1:CDS:1;Parent=LTnewLM_320035600.1 ### LTnewLM_32 . polypeptide 1116204 1118117 . - . ID=LTnewLM_320035600.1:pep;Derives_from=LTnewLM_320035600.1;orthologous_to=LmjF.32.2850_mRNA;ortholog_cluster=OG0004910;product=term%3DCS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04969 LTnewLM_32 Pfam protein_match 1117917 1118102 . - . Parent=LTnewLM_320035600.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_32 AUGUSTUS gene 1119810 1122062 1 - . ID=LTnewLM_320035700 LTnewLM_32 AUGUSTUS mRNA 1119810 1122062 1 - . ID=LTnewLM_320035700.1;Parent=LTnewLM_320035700 LTnewLM_32 AUGUSTUS CDS 1119810 1122062 1 - 0 ID=LTnewLM_320035700.1:CDS:1;Parent=LTnewLM_320035700.1 ### LTnewLM_32 . polypeptide 1119810 1122062 . - . ID=LTnewLM_320035700.1:pep;Derives_from=LTnewLM_320035700.1;orthologous_to=LmjF.32.2860_mRNA;ortholog_cluster=OG0004911;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 1125411 1126907 . - . ID=LTnewLM_320035800:pseudogene;coverage=0.998;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.2870_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1125411 1126907 . - . ID=LTnewLM_320035800.1;Parent=LTnewLM_320035800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1125411 1126907 . - . ID=LTnewLM_320035800.1:pseudogenic_exon:1;Parent=LTnewLM_320035800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1125411 1126907 . - . ID=LTnewLM_320035800.1:pep;Derives_from=LTnewLM_320035800.1;orthologous_to=LmjF.32.2870_mRNA;ortholog_cluster=OG0007624;product=term%3DCytidylyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01148;Ontology_term=GO:0016020,GO:0016772 LTnewLM_32 Pfam protein_match 1125474 1125803 . - . Parent=LTnewLM_320035800.1:pep;Name=PF01148;signature_desc=Cytidylyltransferase family;Ontology_term=GO:0016772,GO:0016020 ### LTnewLM_32 . polypeptide 1128706 1130213 . - . ID=LTnewLM_320035900.1:pep;Derives_from=LTnewLM_320035900.1;orthologous_to=LTnewLM_320035900.2,LmjF.32.2880_mRNA;ortholog_cluster=OG0000445;product=term%3DProtein of unknown function (DUF778)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05608 LTnewLM_32 Pfam protein_match 1128885 1130078 . - . Parent=LTnewLM_320035900.1:pep;Name=PF05608;signature_desc=Protein of unknown function (DUF778) ### LTnewLM_32 AUGUSTUS gene 1128706 1131021 2 - . ID=LTnewLM_320035900 LTnewLM_32 AUGUSTUS mRNA 1128706 1130213 1 - . ID=LTnewLM_320035900.1;Parent=LTnewLM_320035900 LTnewLM_32 AUGUSTUS CDS 1128706 1130151 1 - 0 ID=LTnewLM_320035900.1:CDS:1;Parent=LTnewLM_320035900.1 LTnewLM_32 AUGUSTUS CDS 1130208 1130213 1 - 0 ID=LTnewLM_320035900.1:CDS:2;Parent=LTnewLM_320035900.1 LTnewLM_32 AUGUSTUS mRNA 1128706 1131021 1 - . ID=LTnewLM_320035900.2;Parent=LTnewLM_320035900 LTnewLM_32 AUGUSTUS CDS 1128706 1131021 1 - 0 ID=LTnewLM_320035900.2:CDS:1;Parent=LTnewLM_320035900.2 ### LTnewLM_32 . polypeptide 1128706 1131021 . - . ID=LTnewLM_320035900.2:pep;Derives_from=LTnewLM_320035900.2;orthologous_to=LTnewLM_320035900.1,LmjF.32.2880_mRNA;ortholog_cluster=OG0000445;product=term%3DProtein of unknown function (DUF778)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05608 LTnewLM_32 Pfam protein_match 1128829 1130022 . - . Parent=LTnewLM_320035900.2:pep;Name=PF05608;signature_desc=Protein of unknown function (DUF778) ### LTnewLM_32 AUGUSTUS gene 1135352 1136686 1 - . ID=LTnewLM_320036000 LTnewLM_32 AUGUSTUS mRNA 1135352 1136686 1 - . ID=LTnewLM_320036000.1;Parent=LTnewLM_320036000 LTnewLM_32 AUGUSTUS CDS 1135352 1136686 1 - 0 ID=LTnewLM_320036000.1:CDS:1;Parent=LTnewLM_320036000.1 ### LTnewLM_32 . polypeptide 1135352 1136686 . - . ID=LTnewLM_320036000.1:pep;Derives_from=LTnewLM_320036000.1;orthologous_to=LmjF.32.2885_mRNA;ortholog_cluster=OG0004912;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1137565 1138440 1 - . ID=LTnewLM_320036100 LTnewLM_32 AUGUSTUS mRNA 1137565 1138440 1 - . ID=LTnewLM_320036100.1;Parent=LTnewLM_320036100 LTnewLM_32 AUGUSTUS CDS 1137565 1138440 1 - 0 ID=LTnewLM_320036100.1:CDS:1;Parent=LTnewLM_320036100.1 ### LTnewLM_32 . polypeptide 1137565 1138440 . - . ID=LTnewLM_320036100.1:pep;Derives_from=LTnewLM_320036100.1;orthologous_to=LmjF.32.2890_mRNA;ortholog_cluster=OG0004913;product=term%3DSoluble NSF attachment protein%2C SNAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14938 LTnewLM_32 Pfam protein_match 1137598 1138431 . - . Parent=LTnewLM_320036100.1:pep;Name=PF14938;signature_desc=Soluble NSF attachment protein%2C SNAP ### LTnewLM_32 AUGUSTUS gene 1140761 1142617 1 - . ID=LTnewLM_320036200 LTnewLM_32 AUGUSTUS mRNA 1140761 1142617 1 - . ID=LTnewLM_320036200.1;Parent=LTnewLM_320036200 LTnewLM_32 AUGUSTUS CDS 1140761 1142617 1 - 0 ID=LTnewLM_320036200.1:CDS:1;Parent=LTnewLM_320036200.1 ### LTnewLM_32 . polypeptide 1140761 1142617 . - . ID=LTnewLM_320036200.1:pep;Derives_from=LTnewLM_320036200.1;orthologous_to=LmjF.32.2900_mRNA;ortholog_cluster=OG0004914;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1145113 1149138 1 - . ID=LTnewLM_320036300 LTnewLM_32 AUGUSTUS mRNA 1145113 1149138 1 - . ID=LTnewLM_320036300.1;Parent=LTnewLM_320036300 LTnewLM_32 AUGUSTUS CDS 1145113 1149138 1 - 0 ID=LTnewLM_320036300.1:CDS:1;Parent=LTnewLM_320036300.1 ### LTnewLM_32 . polypeptide 1145113 1149138 . - . ID=LTnewLM_320036300.1:pep;Derives_from=LTnewLM_320036300.1;orthologous_to=LmjF.32.2910_mRNA;ortholog_cluster=OG0004915;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443|Pfam:PF13423;Ontology_term=GO:0006511,GO:0036459 LTnewLM_32 Pfam protein_match 1145152 1147257 . - . Parent=LTnewLM_320036300.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_32 Pfam protein_match 1145209 1145829 . - . Parent=LTnewLM_320036300.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_32 AUGUSTUS gene 1150640 1152823 1 - . ID=LTnewLM_320036400 LTnewLM_32 AUGUSTUS mRNA 1150640 1152823 1 - . ID=LTnewLM_320036400.1;Parent=LTnewLM_320036400 LTnewLM_32 AUGUSTUS CDS 1150640 1152823 1 - 0 ID=LTnewLM_320036400.1:CDS:1;Parent=LTnewLM_320036400.1 ### LTnewLM_32 . polypeptide 1150640 1152823 . - . ID=LTnewLM_320036400.1:pep;Derives_from=LTnewLM_320036400.1;orthologous_to=LmjF.32.2920_mRNA;ortholog_cluster=OG0004916;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1153422 1155338 1 - . ID=LTnewLM_320036500 LTnewLM_32 AUGUSTUS mRNA 1153422 1155338 1 - . ID=LTnewLM_320036500.1;Parent=LTnewLM_320036500 LTnewLM_32 AUGUSTUS CDS 1153422 1155338 1 - 0 ID=LTnewLM_320036500.1:CDS:1;Parent=LTnewLM_320036500.1 ### LTnewLM_32 . polypeptide 1153422 1155338 . - . ID=LTnewLM_320036500.1:pep;Derives_from=LTnewLM_320036500.1;orthologous_to=LmjF.27.2490_mRNA,LmjF.32.2930_mRNA;ortholog_cluster=OG0000446;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_32 Pfam protein_match 1153509 1153721 . - . Parent=LTnewLM_320036500.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 LTnewLM_32 Pfam protein_match 1153659 1154540 . - . Parent=LTnewLM_320036500.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_32 AUGUSTUS gene 1156647 1158461 1 - . ID=LTnewLM_320036600 LTnewLM_32 AUGUSTUS mRNA 1156647 1158461 1 - . ID=LTnewLM_320036600.1;Parent=LTnewLM_320036600 LTnewLM_32 AUGUSTUS CDS 1156647 1158461 1 - 0 ID=LTnewLM_320036600.1:CDS:1;Parent=LTnewLM_320036600.1 ### LTnewLM_32 . polypeptide 1156647 1158461 . - . ID=LTnewLM_320036600.1:pep;Derives_from=LTnewLM_320036600.1;orthologous_to=LmjF.32.2940_mRNA;ortholog_cluster=OG0004917;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_32 Pfam protein_match 1156980 1157198 . - . Parent=LTnewLM_320036600.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein LTnewLM_32 Pfam protein_match 1157661 1157840 . - . Parent=LTnewLM_320036600.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_32 AUGUSTUS gene 1159411 1159866 1 - . ID=LTnewLM_320036700 LTnewLM_32 AUGUSTUS mRNA 1159411 1159866 1 - . ID=LTnewLM_320036700.1;Parent=LTnewLM_320036700 LTnewLM_32 AUGUSTUS CDS 1159411 1159866 1 - 0 ID=LTnewLM_320036700.1:CDS:1;Parent=LTnewLM_320036700.1 ### LTnewLM_32 . polypeptide 1159411 1159866 . - . ID=LTnewLM_320036700.1:pep;Derives_from=LTnewLM_320036700.1;orthologous_to=LTnewLM_320036800.1,LmjF.32.2950_mRNA;ortholog_cluster=OG0000447;product=term%3DNucleoside diphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00334;Ontology_term=GO:0006241,GO:0005524,GO:0006183,GO:0006165,GO:0004550,GO:0006228 LTnewLM_32 Pfam protein_match 1159456 1159857 . - . Parent=LTnewLM_320036700.1:pep;Name=PF00334;signature_desc=Nucleoside diphosphate kinase;Ontology_term=GO:0004550,GO:0005524,GO:0006165,GO:0006183,GO:0006228,GO:0006241 ### LTnewLM_32 AUGUSTUS gene 1160456 1160911 1 - . ID=LTnewLM_320036800 LTnewLM_32 AUGUSTUS mRNA 1160456 1160911 1 - . ID=LTnewLM_320036800.1;Parent=LTnewLM_320036800 LTnewLM_32 AUGUSTUS CDS 1160456 1160911 1 - 0 ID=LTnewLM_320036800.1:CDS:1;Parent=LTnewLM_320036800.1 ### LTnewLM_32 . polypeptide 1160456 1160911 . - . ID=LTnewLM_320036800.1:pep;Derives_from=LTnewLM_320036800.1;orthologous_to=LTnewLM_320036700.1,LmjF.32.2950_mRNA;ortholog_cluster=OG0000447;product=term%3DNucleoside diphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00334;Ontology_term=GO:0006241,GO:0005524,GO:0006183,GO:0006165,GO:0004550,GO:0006228 LTnewLM_32 Pfam protein_match 1160501 1160902 . - . Parent=LTnewLM_320036800.1:pep;Name=PF00334;signature_desc=Nucleoside diphosphate kinase;Ontology_term=GO:0004550,GO:0005524,GO:0006165,GO:0006183,GO:0006228,GO:0006241 ### LTnewLM_32 AUGUSTUS gene 1161290 1163467 1 - . ID=LTnewLM_320036900 LTnewLM_32 AUGUSTUS mRNA 1161290 1163467 1 - . ID=LTnewLM_320036900.1;Parent=LTnewLM_320036900 LTnewLM_32 AUGUSTUS CDS 1161290 1163467 1 - 0 ID=LTnewLM_320036900.1:CDS:1;Parent=LTnewLM_320036900.1 ### LTnewLM_32 . polypeptide 1161290 1163467 . - . ID=LTnewLM_320036900.1:pep;Derives_from=LTnewLM_320036900.1;orthologous_to=LmjF.32.2960_mRNA;ortholog_cluster=OG0004918;product=term%3DMCM N-terminal domain/MCM OB domain/MCM P-loop domain/AAA domain (dynein-related subfamily)/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14551|Pfam:PF17207|Pfam:PF00493|Pfam:PF07728|Pfam:PF01078|Pfam:PF17855;Ontology_term=GO:0015979,GO:0015995,GO:0005524,GO:0016851,GO:0006260,GO:0016887,GO:0003677 LTnewLM_32 Pfam protein_match 1161539 1161781 . - . Parent=LTnewLM_320036900.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain LTnewLM_32 Pfam protein_match 1161857 1162516 . - . Parent=LTnewLM_320036900.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_32 Pfam protein_match 1161935 1162351 . - . Parent=LTnewLM_320036900.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_32 Pfam protein_match 1162007 1162201 . - . Parent=LTnewLM_320036900.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_32 Pfam protein_match 1162649 1163038 . - . Parent=LTnewLM_320036900.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_32 Pfam protein_match 1163072 1163389 . - . Parent=LTnewLM_320036900.1:pep;Name=PF14551;signature_desc=MCM N-terminal domain ### LTnewLM_32 AUGUSTUS gene 1163874 1164251 1 - . ID=LTnewLM_320037000 LTnewLM_32 AUGUSTUS mRNA 1163874 1164251 1 - . ID=LTnewLM_320037000.1;Parent=LTnewLM_320037000 LTnewLM_32 AUGUSTUS CDS 1163874 1164251 1 - 0 ID=LTnewLM_320037000.1:CDS:1;Parent=LTnewLM_320037000.1 ### LTnewLM_32 . polypeptide 1163874 1164251 . - . ID=LTnewLM_320037000.1:pep;Derives_from=LTnewLM_320037000.1;orthologous_to=LmjF.32.2970_mRNA;ortholog_cluster=OG0004919;product=term%3DTubulin binding cofactor A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02970;Ontology_term=GO:0005874,GO:0007021,GO:0051082 LTnewLM_32 Pfam protein_match 1163913 1164188 . - . Parent=LTnewLM_320037000.1:pep;Name=PF02970;signature_desc=Tubulin binding cofactor A;Ontology_term=GO:0051082,GO:0007021,GO:0005874 ### LTnewLM_32 AUGUSTUS gene 1164541 1165110 1 - . ID=LTnewLM_320037100 LTnewLM_32 AUGUSTUS mRNA 1164541 1165110 1 - . ID=LTnewLM_320037100.1;Parent=LTnewLM_320037100 LTnewLM_32 AUGUSTUS CDS 1164541 1165110 1 - 0 ID=LTnewLM_320037100.1:CDS:1;Parent=LTnewLM_320037100.1 ### LTnewLM_32 . polypeptide 1164541 1165110 . - . ID=LTnewLM_320037100.1:pep;Derives_from=LTnewLM_320037100.1;orthologous_to=LmjF.32.2980_mRNA;ortholog_cluster=OG0004920;product=term%3DPhosducin/Thioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02114|Pfam:PF00085;Ontology_term=GO:0045454 LTnewLM_32 Pfam protein_match 1164556 1165044 . - . Parent=LTnewLM_320037100.1:pep;Name=PF02114;signature_desc=Phosducin LTnewLM_32 Pfam protein_match 1164661 1164909 . - . Parent=LTnewLM_320037100.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_32 AUGUSTUS gene 1165397 1165993 1 - . ID=LTnewLM_320037200 LTnewLM_32 AUGUSTUS mRNA 1165397 1165993 1 - . ID=LTnewLM_320037200.1;Parent=LTnewLM_320037200 LTnewLM_32 AUGUSTUS CDS 1165397 1165993 1 - 0 ID=LTnewLM_320037200.1:CDS:1;Parent=LTnewLM_320037200.1 ### LTnewLM_32 . polypeptide 1165397 1165993 . - . ID=LTnewLM_320037200.1:pep;Derives_from=LTnewLM_320037200.1;orthologous_to=LmjF.32.2985_mRNA;ortholog_cluster=OG0004921;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 1171948 1175488 . + . ID=LTnewLM_320037300;coverage=0.998;sequence_ID=0.950;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.32.2990_0 LTnewLM_32 Liftoff mRNA 1171948 1175488 . + . ID=LTnewLM_320037300.1;Parent=LTnewLM_320037300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 1171948 1172929 . + . ID=LTnewLM_320037300:five_prime_UTR;Parent=LTnewLM_320037300.1;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1172930 1175488 . + 0 ID=LTnewLM_320037300.1:CDS:1;Parent=LTnewLM_320037300.1;extra_copy_number=0 LTnewLM_32 Liftoff mRNA 1174288 1175488 . + . ID=LTnewLM_320037300.2;Parent=LTnewLM_320037300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff five_prime_UTR 1174288 1174957 . + . ID=LTnewLM_320037300:five_prime_UTR.1;Parent=LTnewLM_320037300.2;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1174958 1175488 . + 0 ID=LTnewLM_320037300.2:CDS:1;Parent=LTnewLM_320037300.2;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1172930 1175488 . + . ID=LTnewLM_320037300.1:pep;Derives_from=LTnewLM_320037300.1;orthologous_to=LmjF.32.2990.2_mRNA;ortholog_cluster=OG0004922;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . polypeptide 1174958 1175488 . + . ID=LTnewLM_320037300.2:pep;Derives_from=LTnewLM_320037300.2;orthologous_to=LmjF.32.2990.1_mRNA;ortholog_cluster=OG0004923;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1175861 1176394 1 + . ID=LTnewLM_320037400 LTnewLM_32 AUGUSTUS mRNA 1175861 1176394 1 + . ID=LTnewLM_320037400.1;Parent=LTnewLM_320037400 LTnewLM_32 AUGUSTUS CDS 1175861 1176394 1 + 0 ID=LTnewLM_320037400.1:CDS:1;Parent=LTnewLM_320037400.1 ### LTnewLM_32 . polypeptide 1175861 1176394 . + . ID=LTnewLM_320037400.1:pep;Derives_from=LTnewLM_320037400.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 1176809 1177024 1 + . ID=LTnewLM_320037500 LTnewLM_32 AUGUSTUS mRNA 1176809 1177024 1 + . ID=LTnewLM_320037500.1;Parent=LTnewLM_320037500 LTnewLM_32 AUGUSTUS CDS 1176809 1177024 1 + 0 ID=LTnewLM_320037500.1:CDS:1;Parent=LTnewLM_320037500.1 ### LTnewLM_32 . polypeptide 1176809 1177024 . + . ID=LTnewLM_320037500.1:pep;Derives_from=LTnewLM_320037500.1;product=term%3DCytochrome oxidase c subunit VIb%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02297;Ontology_term=GO:0005739,GO:0004129 LTnewLM_32 Pfam protein_match 1176815 1176973 . + . Parent=LTnewLM_320037500.1:pep;Name=PF02297;signature_desc=Cytochrome oxidase c subunit VIb;Ontology_term=GO:0004129,GO:0005739 ### LTnewLM_32 AUGUSTUS gene 1177393 1177716 1 + . ID=LTnewLM_320037600 LTnewLM_32 AUGUSTUS mRNA 1177393 1177716 1 + . ID=LTnewLM_320037600.1;Parent=LTnewLM_320037600 LTnewLM_32 AUGUSTUS CDS 1177393 1177716 1 + 0 ID=LTnewLM_320037600.1:CDS:1;Parent=LTnewLM_320037600.1 ### LTnewLM_32 . polypeptide 1177393 1177716 . + . ID=LTnewLM_320037600.1:pep;Derives_from=LTnewLM_320037600.1;orthologous_to=LmjF.32.2995_mRNA;ortholog_cluster=OG0004924;product=term%3DEMC6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07019 LTnewLM_32 Pfam protein_match 1177450 1177692 . + . Parent=LTnewLM_320037600.1:pep;Name=PF07019;signature_desc=EMC6 ### LTnewLM_32 AUGUSTUS gene 1178479 1178931 1 + . ID=LTnewLM_320037700 LTnewLM_32 AUGUSTUS mRNA 1178479 1178931 1 + . ID=LTnewLM_320037700.1;Parent=LTnewLM_320037700 LTnewLM_32 AUGUSTUS CDS 1178479 1178931 1 + 0 ID=LTnewLM_320037700.1:CDS:1;Parent=LTnewLM_320037700.1 ### LTnewLM_32 . polypeptide 1178479 1178931 . + . ID=LTnewLM_320037700.1:pep;Derives_from=LTnewLM_320037700.1;orthologous_to=LTnewLM_320037900.1,LmjF.32.3000_mRNA;ortholog_cluster=OG0000448;product=term%3DCyclin M transmembrane N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595 LTnewLM_32 Pfam protein_match 1178479 1178919 . + . Parent=LTnewLM_320037700.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_32 AUGUSTUS gene 1179093 1179613 0.4 + . ID=LTnewLM_320037800 LTnewLM_32 AUGUSTUS mRNA 1179093 1179613 0.4 + . ID=LTnewLM_320037800.1;Parent=LTnewLM_320037800 LTnewLM_32 AUGUSTUS CDS 1179093 1179434 0.55 + 0 ID=LTnewLM_320037800.1:CDS:1;Parent=LTnewLM_320037800.1 LTnewLM_32 AUGUSTUS CDS 1179557 1179613 0.57 + 0 ID=LTnewLM_320037800.1:CDS:2;Parent=LTnewLM_320037800.1 ### LTnewLM_32 . polypeptide 1179093 1179613 . + . ID=LTnewLM_320037800.1:pep;Derives_from=LTnewLM_320037800.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 1180380 1181591 1 + . ID=LTnewLM_320037900 LTnewLM_32 AUGUSTUS mRNA 1180380 1181591 1 + . ID=LTnewLM_320037900.1;Parent=LTnewLM_320037900 LTnewLM_32 AUGUSTUS CDS 1180380 1181591 1 + 0 ID=LTnewLM_320037900.1:CDS:1;Parent=LTnewLM_320037900.1 ### LTnewLM_32 . polypeptide 1180380 1181591 . + . ID=LTnewLM_320037900.1:pep;Derives_from=LTnewLM_320037900.1;orthologous_to=LTnewLM_320037700.1,LmjF.32.3000_mRNA;ortholog_cluster=OG0000448;product=term%3DCyclin M transmembrane N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595 LTnewLM_32 Pfam protein_match 1180443 1180928 . + . Parent=LTnewLM_320037900.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_32 AUGUSTUS gene 1182340 1184967 1 + . ID=LTnewLM_320038000 LTnewLM_32 AUGUSTUS mRNA 1182340 1184967 1 + . ID=LTnewLM_320038000.1;Parent=LTnewLM_320038000 LTnewLM_32 AUGUSTUS CDS 1182340 1184967 1 + 0 ID=LTnewLM_320038000.1:CDS:1;Parent=LTnewLM_320038000.1 ### LTnewLM_32 . polypeptide 1182340 1184967 . + . ID=LTnewLM_320038000.1:pep;Derives_from=LTnewLM_320038000.1;orthologous_to=LmjF.32.3010_mRNA;ortholog_cluster=OG0004925;product=term%3DLeucine Rich repeats (2 copies)/Glycogen recognition site of AMP-activated protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12799|Pfam:PF16561 LTnewLM_32 Pfam protein_match 1182664 1182768 . + . Parent=LTnewLM_320038000.1:pep;Name=PF12799;signature_desc=Leucine Rich repeats (2 copies) LTnewLM_32 Pfam protein_match 1182721 1182834 . + . Parent=LTnewLM_320038000.1:pep;Name=PF12799;signature_desc=Leucine Rich repeats (2 copies) LTnewLM_32 Pfam protein_match 1183201 1183452 . + . Parent=LTnewLM_320038000.1:pep;Name=PF16561;signature_desc=Glycogen recognition site of AMP-activated protein kinase ### LTnewLM_32 . pseudogene 1187441 1189809 . + . ID=LTnewLM_320038100:pseudogene;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3020_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1187441 1189809 . + . ID=LTnewLM_320038100.1;Parent=LTnewLM_320038100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1187441 1189809 . + . ID=LTnewLM_320038100.1:pseudogenic_exon:1;Parent=LTnewLM_320038100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1187441 1189809 . + . ID=LTnewLM_320038100.1:pep;Derives_from=LTnewLM_320038100.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 1190496 1191485 1 + . ID=LTnewLM_320038200 LTnewLM_32 AUGUSTUS mRNA 1190496 1191485 1 + . ID=LTnewLM_320038200.1;Parent=LTnewLM_320038200 LTnewLM_32 AUGUSTUS CDS 1190496 1191485 1 + 0 ID=LTnewLM_320038200.1:CDS:1;Parent=LTnewLM_320038200.1 ### LTnewLM_32 . polypeptide 1190496 1191485 . + . ID=LTnewLM_320038200.1:pep;Derives_from=LTnewLM_320038200.1;orthologous_to=LmjF.32.3030_mRNA;ortholog_cluster=OG0004926;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_32 Pfam protein_match 1190538 1190711 . + . Parent=LTnewLM_320038200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_32 AUGUSTUS gene 1194221 1195147 1 + . ID=LTnewLM_320038300 LTnewLM_32 AUGUSTUS mRNA 1194221 1195147 1 + . ID=LTnewLM_320038300.1;Parent=LTnewLM_320038300 LTnewLM_32 AUGUSTUS CDS 1194221 1195147 1 + 0 ID=LTnewLM_320038300.1:CDS:1;Parent=LTnewLM_320038300.1 ### LTnewLM_32 . polypeptide 1194221 1195147 . + . ID=LTnewLM_320038300.1:pep;Derives_from=LTnewLM_320038300.1;orthologous_to=LmjF.32.3040_mRNA;ortholog_cluster=OG0004927;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_32 Pfam protein_match 1194371 1194937 . + . Parent=LTnewLM_320038300.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_32 AUGUSTUS gene 1197628 1200717 1 + . ID=LTnewLM_320038400 LTnewLM_32 AUGUSTUS mRNA 1197628 1200717 1 + . ID=LTnewLM_320038400.1;Parent=LTnewLM_320038400 LTnewLM_32 AUGUSTUS CDS 1197628 1200717 1 + 0 ID=LTnewLM_320038400.1:CDS:1;Parent=LTnewLM_320038400.1 ### LTnewLM_32 . polypeptide 1197628 1200717 . + . ID=LTnewLM_320038400.1:pep;Derives_from=LTnewLM_320038400.1;orthologous_to=LmjF.32.3050_mRNA;ortholog_cluster=OG0004928;product=term%3DRas of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_32 Pfam protein_match 1198432 1198812 . + . Parent=LTnewLM_320038400.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_32 Pfam protein_match 1198432 1198821 . + . Parent=LTnewLM_320038400.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_32 AUGUSTUS gene 1202320 1205619 1 + . ID=LTnewLM_320038500 LTnewLM_32 AUGUSTUS mRNA 1202320 1205619 1 + . ID=LTnewLM_320038500.1;Parent=LTnewLM_320038500 LTnewLM_32 AUGUSTUS CDS 1202320 1205619 1 + 0 ID=LTnewLM_320038500.1:CDS:1;Parent=LTnewLM_320038500.1 ### LTnewLM_32 . polypeptide 1202320 1205619 . + . ID=LTnewLM_320038500.1:pep;Derives_from=LTnewLM_320038500.1;orthologous_to=LmjF.32.3060_mRNA;ortholog_cluster=OG0004929;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1206782 1207135 1 + . ID=LTnewLM_320038600 LTnewLM_32 AUGUSTUS mRNA 1206782 1207135 1 + . ID=LTnewLM_320038600.1;Parent=LTnewLM_320038600 LTnewLM_32 AUGUSTUS CDS 1206782 1207135 1 + 0 ID=LTnewLM_320038600.1:CDS:1;Parent=LTnewLM_320038600.1 ### LTnewLM_32 . polypeptide 1206782 1207135 . + . ID=LTnewLM_320038600.1:pep;Derives_from=LTnewLM_320038600.1;orthologous_to=LmjF.32.3065_mRNA;ortholog_cluster=OG0004930;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1208374 1210326 1 + . ID=LTnewLM_320038700 LTnewLM_32 AUGUSTUS mRNA 1208374 1210326 1 + . ID=LTnewLM_320038700.1;Parent=LTnewLM_320038700 LTnewLM_32 AUGUSTUS CDS 1208374 1210326 1 + 0 ID=LTnewLM_320038700.1:CDS:1;Parent=LTnewLM_320038700.1 ### LTnewLM_32 . polypeptide 1208374 1210326 . + . ID=LTnewLM_320038700.1:pep;Derives_from=LTnewLM_320038700.1;orthologous_to=LmjF.32.3070_mRNA;ortholog_cluster=OG0004931;product=term%3DMIZ/SP-RING zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02891;Ontology_term=GO:0008270 LTnewLM_32 Pfam protein_match 1209070 1209225 . + . Parent=LTnewLM_320038700.1:pep;Name=PF02891;signature_desc=MIZ/SP-RING zinc finger;Ontology_term=GO:0008270 ### LTnewLM_32 Liftoff gene 1211498 1214188 . + . ID=LTnewLM_320038800;coverage=0.992;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3080_0 LTnewLM_32 Liftoff mRNA 1211498 1214188 . + . ID=LTnewLM_320038800.1;Parent=LTnewLM_320038800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1211498 1214188 . + 0 ID=LTnewLM_320038800.1:CDS:1;Parent=LTnewLM_320038800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1211498 1214188 . + . ID=LTnewLM_320038800.1:pep;Derives_from=LTnewLM_320038800.1;orthologous_to=LmjF.32.3080_mRNA;ortholog_cluster=OG0004932;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_32 Pfam protein_match 1212398 1213237 . + . Parent=LTnewLM_320038800.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_32 Pfam protein_match 1213430 1213876 . + . Parent=LTnewLM_320038800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_32 Liftoff gene 1216642 1221420 . + . ID=LTnewLM_320038900;coverage=0.995;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.3090_0 LTnewLM_32 Liftoff mRNA 1216642 1221420 . + . ID=LTnewLM_320038900.1;Parent=LTnewLM_320038900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1216642 1221420 . + 0 ID=LTnewLM_320038900.1:CDS:1;Parent=LTnewLM_320038900.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1216642 1221420 . + . ID=LTnewLM_320038900.1:pep;Derives_from=LTnewLM_320038900.1;orthologous_to=LmjF.32.3090_mRNA;ortholog_cluster=OG0004933;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1223037 1223954 1 + . ID=LTnewLM_320039000 LTnewLM_32 AUGUSTUS mRNA 1223037 1223954 1 + . ID=LTnewLM_320039000.1;Parent=LTnewLM_320039000 LTnewLM_32 AUGUSTUS CDS 1223037 1223954 1 + 0 ID=LTnewLM_320039000.1:CDS:1;Parent=LTnewLM_320039000.1 ### LTnewLM_32 . polypeptide 1223037 1223954 . + . ID=LTnewLM_320039000.1:pep;Derives_from=LTnewLM_320039000.1;orthologous_to=LmjF.32.3100_mRNA;ortholog_cluster=OG0004934;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1224707 1227586 1 + . ID=LTnewLM_320039100 LTnewLM_32 AUGUSTUS mRNA 1224707 1227586 1 + . ID=LTnewLM_320039100.1;Parent=LTnewLM_320039100 LTnewLM_32 AUGUSTUS CDS 1224707 1227586 1 + 0 ID=LTnewLM_320039100.1:CDS:1;Parent=LTnewLM_320039100.1 ### LTnewLM_32 . polypeptide 1224707 1227586 . + . ID=LTnewLM_320039100.1:pep;Derives_from=LTnewLM_320039100.1;orthologous_to=LmjF.32.3110_mRNA;ortholog_cluster=OG0004935;product=term%3DSerine hydrolase (FSH1)/50S ribosome-binding GTPase/GTPase of unknown function C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03959|Pfam:PF01926|Pfam:PF08438;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 1224710 1225339 . + . Parent=LTnewLM_320039100.1:pep;Name=PF03959;signature_desc=Serine hydrolase (FSH1) LTnewLM_32 Pfam protein_match 1226093 1226548 . + . Parent=LTnewLM_320039100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_32 Pfam protein_match 1226873 1227241 . + . Parent=LTnewLM_320039100.1:pep;Name=PF08438;signature_desc=GTPase of unknown function C-terminal ### LTnewLM_32 AUGUSTUS gene 1229325 1229663 1 + . ID=LTnewLM_320039200 LTnewLM_32 AUGUSTUS mRNA 1229325 1229663 1 + . ID=LTnewLM_320039200.1;Parent=LTnewLM_320039200 LTnewLM_32 AUGUSTUS CDS 1229325 1229663 1 + 0 ID=LTnewLM_320039200.1:CDS:1;Parent=LTnewLM_320039200.1 ### LTnewLM_32 . polypeptide 1229325 1229663 . + . ID=LTnewLM_320039200.1:pep;Derives_from=LTnewLM_320039200.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1230224 1231483 1 + . ID=LTnewLM_320039300 LTnewLM_32 AUGUSTUS mRNA 1230224 1231483 1 + . ID=LTnewLM_320039300.1;Parent=LTnewLM_320039300 LTnewLM_32 AUGUSTUS CDS 1230224 1231483 1 + 0 ID=LTnewLM_320039300.1:CDS:1;Parent=LTnewLM_320039300.1 ### LTnewLM_32 . polypeptide 1230224 1231483 . + . ID=LTnewLM_320039300.1:pep;Derives_from=LTnewLM_320039300.1;orthologous_to=LTnewLM_340034900.1,LTnewLM_340035000.1,LmjF.32.3130_mRNA,LmjF.34.2870_mRNA,LmjF.34.2880_mRNA,LmjF.34.2890_mRNA,LmjF.34.2900_mRNA;ortholog_cluster=OG0000033;product=term%3DRibosomal protein L3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00297;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_32 Pfam protein_match 1230224 1231339 . + . Parent=LTnewLM_320039300.1:pep;Name=PF00297;signature_desc=Ribosomal protein L3;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_32 AUGUSTUS gene 1233104 1234543 1 + . ID=LTnewLM_320039400 LTnewLM_32 AUGUSTUS mRNA 1233104 1234543 1 + . ID=LTnewLM_320039400.1;Parent=LTnewLM_320039400 LTnewLM_32 AUGUSTUS CDS 1233104 1234543 1 + 0 ID=LTnewLM_320039400.1:CDS:1;Parent=LTnewLM_320039400.1 ### LTnewLM_32 . polypeptide 1233104 1234543 . + . ID=LTnewLM_320039400.1:pep;Derives_from=LTnewLM_320039400.1;orthologous_to=LmjF.32.3140_mRNA;ortholog_cluster=OG0004936;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_32 Pfam protein_match 1233128 1233937 . + . Parent=LTnewLM_320039400.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_32 AUGUSTUS gene 1235874 1242952 1 + . ID=LTnewLM_320039500 LTnewLM_32 AUGUSTUS mRNA 1235874 1242952 1 + . ID=LTnewLM_320039500.1;Parent=LTnewLM_320039500 LTnewLM_32 AUGUSTUS CDS 1235874 1239388 1 + 0 ID=LTnewLM_320039500.1:CDS:1;Parent=LTnewLM_320039500.1 LTnewLM_32 AUGUSTUS CDS 1239604 1242952 1 + 1 ID=LTnewLM_320039500.1:CDS:2;Parent=LTnewLM_320039500.1 ### LTnewLM_32 . polypeptide 1235874 1242952 . + . ID=LTnewLM_320039500.1:pep;Derives_from=LTnewLM_320039500.1;orthologous_to=LmjF.32.3150_mRNA;ortholog_cluster=OG0004937;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1237872 1237916 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1238097 1238153 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1238193 1238243 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1238427 1238483 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1238670 1238717 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1242255 1242308 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1242375 1242425 . + . Parent=LTnewLM_320039500.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_32 AUGUSTUS gene 1244843 1247296 1 + . ID=LTnewLM_320039600 LTnewLM_32 AUGUSTUS mRNA 1244843 1247296 1 + . ID=LTnewLM_320039600.1;Parent=LTnewLM_320039600 LTnewLM_32 AUGUSTUS CDS 1244843 1247296 1 + 0 ID=LTnewLM_320039600.1:CDS:1;Parent=LTnewLM_320039600.1 ### LTnewLM_32 . polypeptide 1244843 1247296 . + . ID=LTnewLM_320039600.1:pep;Derives_from=LTnewLM_320039600.1;orthologous_to=LmjF.32.3160_mRNA;ortholog_cluster=OG0004938;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_32 Pfam protein_match 1246154 1246210 . + . Parent=LTnewLM_320039600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_32 Pfam protein_match 1246226 1246291 . + . Parent=LTnewLM_320039600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_32 AUGUSTUS gene 1248735 1249232 1 + . ID=LTnewLM_320039700 LTnewLM_32 AUGUSTUS mRNA 1248735 1249232 1 + . ID=LTnewLM_320039700.1;Parent=LTnewLM_320039700 LTnewLM_32 AUGUSTUS CDS 1248735 1249232 1 + 0 ID=LTnewLM_320039700.1:CDS:1;Parent=LTnewLM_320039700.1 ### LTnewLM_32 . polypeptide 1248735 1249232 . + . ID=LTnewLM_320039700.1:pep;Derives_from=LTnewLM_320039700.1;orthologous_to=LmjF.32.3170_mRNA;ortholog_cluster=OG0004939;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1250431 1252452 1 + . ID=LTnewLM_320039800 LTnewLM_32 AUGUSTUS mRNA 1250431 1252452 1 + . ID=LTnewLM_320039800.1;Parent=LTnewLM_320039800 LTnewLM_32 AUGUSTUS CDS 1250431 1252452 1 + 0 ID=LTnewLM_320039800.1:CDS:1;Parent=LTnewLM_320039800.1 ### LTnewLM_32 . polypeptide 1250431 1252452 . + . ID=LTnewLM_320039800.1:pep;Derives_from=LTnewLM_320039800.1;orthologous_to=LmjF.32.3180_mRNA;ortholog_cluster=OG0004940;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . polypeptide 1253354 1255961 . + . ID=LTnewLM_320039900.1:pep;Derives_from=LTnewLM_320039900.1;orthologous_to=LTnewLM_320039900.2,LTnewLM_320039900.3,LmjF.32.3190_mRNA;ortholog_cluster=OG0000235;product=term%3DGolgi transport complex subunit 5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10392;Ontology_term=GO:0017119,GO:0006891 LTnewLM_32 Pfam protein_match 1253366 1253734 . + . Parent=LTnewLM_320039900.1:pep;Name=PF10392;signature_desc=Golgi transport complex subunit 5;Ontology_term=GO:0006891,GO:0017119 ### LTnewLM_32 AUGUSTUS gene 1253354 1256469 1.99 + . ID=LTnewLM_320039900 LTnewLM_32 AUGUSTUS mRNA 1253354 1255961 0.92 + . ID=LTnewLM_320039900.1;Parent=LTnewLM_320039900 LTnewLM_32 AUGUSTUS CDS 1253354 1255900 0.92 + 0 ID=LTnewLM_320039900.1:CDS:1;Parent=LTnewLM_320039900.1 LTnewLM_32 AUGUSTUS CDS 1255953 1255961 0.99 + 0 ID=LTnewLM_320039900.1:CDS:2;Parent=LTnewLM_320039900.1 LTnewLM_32 AUGUSTUS mRNA 1253354 1256469 0.56 + . ID=LTnewLM_320039900.2;Parent=LTnewLM_320039900 LTnewLM_32 AUGUSTUS CDS 1253354 1256260 0.67 + 0 ID=LTnewLM_320039900.2:CDS:1;Parent=LTnewLM_320039900.2 LTnewLM_32 AUGUSTUS CDS 1256359 1256469 0.62 + 0 ID=LTnewLM_320039900.2:CDS:2;Parent=LTnewLM_320039900.2 LTnewLM_32 AUGUSTUS mRNA 1255232 1256469 0.51 + . ID=LTnewLM_320039900.3;Parent=LTnewLM_320039900 LTnewLM_32 AUGUSTUS CDS 1255232 1256260 0.65 + 0 ID=LTnewLM_320039900.3:CDS:1;Parent=LTnewLM_320039900.3 LTnewLM_32 AUGUSTUS CDS 1256359 1256469 0.63 + 0 ID=LTnewLM_320039900.3:CDS:2;Parent=LTnewLM_320039900.3 ### LTnewLM_32 . polypeptide 1253354 1256469 . + . ID=LTnewLM_320039900.2:pep;Derives_from=LTnewLM_320039900.2;orthologous_to=LTnewLM_320039900.1,LTnewLM_320039900.3,LmjF.32.3190_mRNA;ortholog_cluster=OG0000235;product=term%3DGolgi transport complex subunit 5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10392;Ontology_term=GO:0017119,GO:0006891 LTnewLM_32 Pfam protein_match 1253366 1253734 . + . Parent=LTnewLM_320039900.2:pep;Name=PF10392;signature_desc=Golgi transport complex subunit 5;Ontology_term=GO:0006891,GO:0017119 ### LTnewLM_32 . polypeptide 1255232 1256469 . + . ID=LTnewLM_320039900.3:pep;Derives_from=LTnewLM_320039900.3;orthologous_to=LTnewLM_320039900.1,LTnewLM_320039900.2,LmjF.32.3190_mRNA;ortholog_cluster=OG0000235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 1258690 1262664 . + . ID=LTnewLM_320040000:pseudogene;coverage=0.998;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3200_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1258690 1262664 . + . ID=LTnewLM_320040000.1;Parent=LTnewLM_320040000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1258690 1262664 . + . ID=LTnewLM_320040000.1:pseudogenic_exon:1;Parent=LTnewLM_320040000.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1258690 1262664 . + . ID=LTnewLM_320040000.1:pep;Derives_from=LTnewLM_320040000.1;orthologous_to=LmjF.32.3200_mRNA;ortholog_cluster=OG0007625;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1263465 1264121 1 + . ID=LTnewLM_320040100 LTnewLM_32 AUGUSTUS mRNA 1263465 1264121 1 + . ID=LTnewLM_320040100.1;Parent=LTnewLM_320040100 LTnewLM_32 AUGUSTUS CDS 1263465 1264121 1 + 0 ID=LTnewLM_320040100.1:CDS:1;Parent=LTnewLM_320040100.1 ### LTnewLM_32 . polypeptide 1263465 1264121 . + . ID=LTnewLM_320040100.1:pep;Derives_from=LTnewLM_320040100.1;orthologous_to=LmjF.32.3210_mRNA;ortholog_cluster=OG0004941;product=term%3DRas of Complex%2C Roc%2C domain of DAPkinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08477;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_32 Pfam protein_match 1263483 1263830 . + . Parent=LTnewLM_320040100.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_32 AUGUSTUS gene 1271886 1273769 1 + . ID=LTnewLM_320040200 LTnewLM_32 AUGUSTUS mRNA 1271886 1273769 1 + . ID=LTnewLM_320040200.1;Parent=LTnewLM_320040200 LTnewLM_32 AUGUSTUS CDS 1271886 1273769 1 + 0 ID=LTnewLM_320040200.1:CDS:1;Parent=LTnewLM_320040200.1 ### LTnewLM_32 . polypeptide 1271886 1273769 . + . ID=LTnewLM_320040200.1:pep;Derives_from=LTnewLM_320040200.1;orthologous_to=LmjF.32.3220_mRNA;ortholog_cluster=OG0004942;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1283030 1284307 1 + . ID=LTnewLM_320040300 LTnewLM_32 AUGUSTUS mRNA 1283030 1284307 1 + . ID=LTnewLM_320040300.1;Parent=LTnewLM_320040300 LTnewLM_32 AUGUSTUS CDS 1283030 1284307 1 + 0 ID=LTnewLM_320040300.1:CDS:1;Parent=LTnewLM_320040300.1 ### LTnewLM_32 . polypeptide 1283030 1284307 . + . ID=LTnewLM_320040300.1:pep;Derives_from=LTnewLM_320040300.1;orthologous_to=LmjF.32.3230_mRNA;ortholog_cluster=OG0004943;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1288669 1292247 1 + . ID=LTnewLM_320040400 LTnewLM_32 AUGUSTUS mRNA 1288669 1292247 1 + . ID=LTnewLM_320040400.1;Parent=LTnewLM_320040400 LTnewLM_32 AUGUSTUS CDS 1288669 1292247 1 + 0 ID=LTnewLM_320040400.1:CDS:1;Parent=LTnewLM_320040400.1 ### LTnewLM_32 . polypeptide 1288669 1292247 . + . ID=LTnewLM_320040400.1:pep;Derives_from=LTnewLM_320040400.1;orthologous_to=LmjF.32.3240_mRNA;ortholog_cluster=OG0004944;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1294565 1297885 1 + . ID=LTnewLM_320040500 LTnewLM_32 AUGUSTUS mRNA 1294565 1297885 1 + . ID=LTnewLM_320040500.1;Parent=LTnewLM_320040500 LTnewLM_32 AUGUSTUS CDS 1294565 1297885 1 + 0 ID=LTnewLM_320040500.1:CDS:1;Parent=LTnewLM_320040500.1 ### LTnewLM_32 . polypeptide 1294565 1297885 . + . ID=LTnewLM_320040500.1:pep;Derives_from=LTnewLM_320040500.1;orthologous_to=LmjF.32.3250_mRNA;ortholog_cluster=OG0004945;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_32 Pfam protein_match 1294574 1295419 . + . Parent=LTnewLM_320040500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_32 Pfam protein_match 1294586 1295404 . + . Parent=LTnewLM_320040500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_32 AUGUSTUS gene 1301141 1301980 1 + . ID=LTnewLM_320040600 LTnewLM_32 AUGUSTUS mRNA 1301141 1301980 1 + . ID=LTnewLM_320040600.1;Parent=LTnewLM_320040600 LTnewLM_32 AUGUSTUS CDS 1301141 1301980 1 + 0 ID=LTnewLM_320040600.1:CDS:1;Parent=LTnewLM_320040600.1 ### LTnewLM_32 . polypeptide 1301141 1301980 . + . ID=LTnewLM_320040600.1:pep;Derives_from=LTnewLM_320040600.1;orthologous_to=LmjF.32.3260_mRNA;ortholog_cluster=OG0004946;product=term%3DGlucosamine-6-phosphate isomerases/6-phosphogluconolactonase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01182;Ontology_term=GO:0005975 LTnewLM_32 Pfam protein_match 1301162 1301821 . + . Parent=LTnewLM_320040600.1:pep;Name=PF01182;signature_desc=Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase;Ontology_term=GO:0005975 ### LTnewLM_32 AUGUSTUS gene 1303682 1305322 1 + . ID=LTnewLM_320040700 LTnewLM_32 AUGUSTUS mRNA 1303682 1305322 1 + . ID=LTnewLM_320040700.1;Parent=LTnewLM_320040700 LTnewLM_32 AUGUSTUS CDS 1303682 1305322 1 + 0 ID=LTnewLM_320040700.1:CDS:1;Parent=LTnewLM_320040700.1 ### LTnewLM_32 . polypeptide 1303682 1305322 . + . ID=LTnewLM_320040700.1:pep;Derives_from=LTnewLM_320040700.1;orthologous_to=LmjF.32.3270_mRNA;ortholog_cluster=OG0004947;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_32 Pfam protein_match 1303775 1305286 . + . Parent=LTnewLM_320040700.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_32 . pseudogene 1313074 1315623 . + . ID=LTnewLM_320040800:pseudogene;coverage=0.982;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3280_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1313074 1315623 . + . ID=LTnewLM_320040800.1;Parent=LTnewLM_320040800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1313074 1315623 . + . ID=LTnewLM_320040800.1:pseudogenic_exon:1;Parent=LTnewLM_320040800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1313074 1315623 . + . ID=LTnewLM_320040800.1:pep;Derives_from=LTnewLM_320040800.1;orthologous_to=LmjF.32.3280_mRNA;ortholog_cluster=OG0007626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1317865 1318587 1 + . ID=LTnewLM_320040900 LTnewLM_32 AUGUSTUS mRNA 1317865 1318587 1 + . ID=LTnewLM_320040900.1;Parent=LTnewLM_320040900 LTnewLM_32 AUGUSTUS CDS 1317865 1318587 1 + 0 ID=LTnewLM_320040900.1:CDS:1;Parent=LTnewLM_320040900.1 ### LTnewLM_32 . polypeptide 1317865 1318587 . + . ID=LTnewLM_320040900.1:pep;Derives_from=LTnewLM_320040900.1;orthologous_to=LmjF.32.3290_mRNA;ortholog_cluster=OG0004948;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1320118 1321326 1 + . ID=LTnewLM_320041000 LTnewLM_32 AUGUSTUS mRNA 1320118 1321326 1 + . ID=LTnewLM_320041000.1;Parent=LTnewLM_320041000 LTnewLM_32 AUGUSTUS CDS 1320118 1321326 1 + 0 ID=LTnewLM_320041000.1:CDS:1;Parent=LTnewLM_320041000.1 ### LTnewLM_32 . polypeptide 1320118 1321326 . + . ID=LTnewLM_320041000.1:pep;Derives_from=LTnewLM_320041000.1;orthologous_to=LmjF.32.3300_mRNA;ortholog_cluster=OG0004949;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_32 Pfam protein_match 1320283 1320474 . + . Parent=LTnewLM_320041000.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_32 Pfam protein_match 1320610 1321275 . + . Parent=LTnewLM_320041000.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_32 Pfam protein_match 1320688 1320882 . + . Parent=LTnewLM_320041000.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 ### LTnewLM_32 AUGUSTUS gene 1322218 1323648 1 + . ID=LTnewLM_320041100 LTnewLM_32 AUGUSTUS mRNA 1322218 1323648 1 + . ID=LTnewLM_320041100.1;Parent=LTnewLM_320041100 LTnewLM_32 AUGUSTUS CDS 1322218 1323648 1 + 0 ID=LTnewLM_320041100.1:CDS:1;Parent=LTnewLM_320041100.1 ### LTnewLM_32 . polypeptide 1322218 1323648 . + . ID=LTnewLM_320041100.1:pep;Derives_from=LTnewLM_320041100.1;orthologous_to=LmjF.32.3310_mRNA;ortholog_cluster=OG0004950;product=term%3DPyridine nucleotide-disulphide oxidoreductase/FAD binding domain/FAD dependent oxidoreductase/Glucose inhibited division protein A/NAD(P)-binding Rossmann-like domain/Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF00890|Pfam:PF12831|Pfam:PF01134|Pfam:PF13450|Pfam:PF13738|Pfam:PF00070|Pfam:PF02852;Ontology_term=GO:0016491,GO:0008033,GO:0045454,GO:0050660,GO:0055114 LTnewLM_32 Pfam protein_match 1322251 1323228 . + . Parent=LTnewLM_320041100.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_32 Pfam protein_match 1322254 1322361 . + . Parent=LTnewLM_320041100.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_32 Pfam protein_match 1322254 1322373 . + . Parent=LTnewLM_320041100.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_32 Pfam protein_match 1322254 1322679 . + . Parent=LTnewLM_320041100.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_32 Pfam protein_match 1322263 1322424 . + . Parent=LTnewLM_320041100.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_32 Pfam protein_match 1322635 1323177 . + . Parent=LTnewLM_320041100.1:pep;Name=PF13738;signature_desc=Pyridine nucleotide-disulphide oxidoreductase LTnewLM_32 Pfam protein_match 1322770 1323003 . + . Parent=LTnewLM_320041100.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 LTnewLM_32 Pfam protein_match 1323286 1323609 . + . Parent=LTnewLM_320041100.1:pep;Name=PF02852;signature_desc=Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain;Ontology_term=GO:0045454,GO:0055114 ### LTnewLM_32 AUGUSTUS gene 1327157 1328455 1 + . ID=LTnewLM_320041200 LTnewLM_32 AUGUSTUS mRNA 1327157 1328455 1 + . ID=LTnewLM_320041200.1;Parent=LTnewLM_320041200 LTnewLM_32 AUGUSTUS CDS 1327157 1328455 1 + 0 ID=LTnewLM_320041200.1:CDS:1;Parent=LTnewLM_320041200.1 ### LTnewLM_32 . polypeptide 1327157 1328455 . + . ID=LTnewLM_320041200.1:pep;Derives_from=LTnewLM_320041200.1;orthologous_to=LmjF.32.3320_mRNA;ortholog_cluster=OG0004951;product=term%3DCyclin%2C N-terminal domain/Cyclin%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00134|Pfam:PF02984;Ontology_term=GO:0005634 LTnewLM_32 Pfam protein_match 1327631 1327996 . + . Parent=LTnewLM_320041200.1:pep;Name=PF00134;signature_desc=Cyclin%2C N-terminal domain LTnewLM_32 Pfam protein_match 1328006 1328428 . + . Parent=LTnewLM_320041200.1:pep;Name=PF02984;signature_desc=Cyclin%2C C-terminal domain;Ontology_term=GO:0005634 ### LTnewLM_32 AUGUSTUS gene 1330605 1330949 1 + . ID=LTnewLM_320041300 LTnewLM_32 AUGUSTUS mRNA 1330605 1330949 1 + . ID=LTnewLM_320041300.1;Parent=LTnewLM_320041300 LTnewLM_32 AUGUSTUS CDS 1330605 1330949 1 + 0 ID=LTnewLM_320041300.1:CDS:1;Parent=LTnewLM_320041300.1 ### LTnewLM_32 . polypeptide 1330605 1330949 . + . ID=LTnewLM_320041300.1:pep;Derives_from=LTnewLM_320041300.1;orthologous_to=LmjF.32.3330_mRNA;ortholog_cluster=OG0004952;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1331864 1335199 1 + . ID=LTnewLM_320041400 LTnewLM_32 AUGUSTUS mRNA 1331864 1335199 1 + . ID=LTnewLM_320041400.1;Parent=LTnewLM_320041400 LTnewLM_32 AUGUSTUS CDS 1331864 1335199 1 + 0 ID=LTnewLM_320041400.1:CDS:1;Parent=LTnewLM_320041400.1 ### LTnewLM_32 . polypeptide 1331864 1335199 . + . ID=LTnewLM_320041400.1:pep;Derives_from=LTnewLM_320041400.1;orthologous_to=LmjF.32.3340_mRNA;ortholog_cluster=OG0004953;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1338557 1342513 1 + . ID=LTnewLM_320041500 LTnewLM_32 AUGUSTUS mRNA 1338557 1342513 1 + . ID=LTnewLM_320041500.1;Parent=LTnewLM_320041500 LTnewLM_32 AUGUSTUS CDS 1338557 1342513 1 + 0 ID=LTnewLM_320041500.1:CDS:1;Parent=LTnewLM_320041500.1 ### LTnewLM_32 . polypeptide 1338557 1342513 . + . ID=LTnewLM_320041500.1:pep;Derives_from=LTnewLM_320041500.1;orthologous_to=LmjF.32.3350_mRNA;ortholog_cluster=OG0004954;product=term%3DB-box zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00643;Ontology_term=GO:0008270,GO:0005622 LTnewLM_32 Pfam protein_match 1340849 1340962 . + . Parent=LTnewLM_320041500.1:pep;Name=PF00643;signature_desc=B-box zinc finger;Ontology_term=GO:0008270,GO:0005622 ### LTnewLM_32 AUGUSTUS gene 1344696 1347125 1 + . ID=LTnewLM_320041600 LTnewLM_32 AUGUSTUS mRNA 1344696 1347125 1 + . ID=LTnewLM_320041600.1;Parent=LTnewLM_320041600 LTnewLM_32 AUGUSTUS CDS 1344696 1347125 1 + 0 ID=LTnewLM_320041600.1:CDS:1;Parent=LTnewLM_320041600.1 ### LTnewLM_32 . polypeptide 1344696 1347125 . + . ID=LTnewLM_320041600.1:pep;Derives_from=LTnewLM_320041600.1;orthologous_to=LmjF.32.3360_mRNA;ortholog_cluster=OG0004955;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_32 Pfam protein_match 1346076 1346366 . + . Parent=LTnewLM_320041600.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_32 AUGUSTUS gene 1348429 1351086 1 + . ID=LTnewLM_320041700 LTnewLM_32 AUGUSTUS mRNA 1348429 1351086 1 + . ID=LTnewLM_320041700.1;Parent=LTnewLM_320041700 LTnewLM_32 AUGUSTUS CDS 1348429 1351086 1 + 0 ID=LTnewLM_320041700.1:CDS:1;Parent=LTnewLM_320041700.1 ### LTnewLM_32 . polypeptide 1348429 1351086 . + . ID=LTnewLM_320041700.1:pep;Derives_from=LTnewLM_320041700.1;orthologous_to=LmjF.32.3370_mRNA;ortholog_cluster=OG0004956;product=term%3DVoltage gated chloride channel/CBS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00654|Pfam:PF00571;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020 LTnewLM_32 Pfam protein_match 1349041 1350315 . + . Parent=LTnewLM_320041700.1:pep;Name=PF00654;signature_desc=Voltage gated chloride channel;Ontology_term=GO:0005247,GO:0006821,GO:0055085,GO:0016020 LTnewLM_32 Pfam protein_match 1350415 1350573 . + . Parent=LTnewLM_320041700.1:pep;Name=PF00571;signature_desc=CBS domain ### LTnewLM_32 AUGUSTUS gene 1351867 1354683 1 + . ID=LTnewLM_320041800 LTnewLM_32 AUGUSTUS mRNA 1351867 1354683 1 + . ID=LTnewLM_320041800.1;Parent=LTnewLM_320041800 LTnewLM_32 AUGUSTUS CDS 1351867 1354683 1 + 0 ID=LTnewLM_320041800.1:CDS:1;Parent=LTnewLM_320041800.1 ### LTnewLM_32 . polypeptide 1351867 1354683 . + . ID=LTnewLM_320041800.1:pep;Derives_from=LTnewLM_320041800.1;orthologous_to=LmjF.32.3380_mRNA;ortholog_cluster=OG0004957;product=term%3DtRNA pseudouridine synthase D (TruD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01142;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_32 Pfam protein_match 1353208 1354122 . + . Parent=LTnewLM_320041800.1:pep;Name=PF01142;signature_desc=tRNA pseudouridine synthase D (TruD);Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_32 AUGUSTUS gene 1355939 1357741 1 + . ID=LTnewLM_320041900 LTnewLM_32 AUGUSTUS mRNA 1355939 1357741 1 + . ID=LTnewLM_320041900.1;Parent=LTnewLM_320041900 LTnewLM_32 AUGUSTUS CDS 1355939 1357741 1 + 0 ID=LTnewLM_320041900.1:CDS:1;Parent=LTnewLM_320041900.1 ### LTnewLM_32 . polypeptide 1355939 1357741 . + . ID=LTnewLM_320041900.1:pep;Derives_from=LTnewLM_320041900.1;orthologous_to=LmjF.32.3390_mRNA;ortholog_cluster=OG0004958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1361027 1362841 1 + . ID=LTnewLM_320042000 LTnewLM_32 AUGUSTUS mRNA 1361027 1362841 1 + . ID=LTnewLM_320042000.1;Parent=LTnewLM_320042000 LTnewLM_32 AUGUSTUS CDS 1361027 1362841 1 + 0 ID=LTnewLM_320042000.1:CDS:1;Parent=LTnewLM_320042000.1 ### LTnewLM_32 . polypeptide 1361027 1362841 . + . ID=LTnewLM_320042000.1:pep;Derives_from=LTnewLM_320042000.1;orthologous_to=LmjF.32.3400_mRNA;ortholog_cluster=OG0004959;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1363958 1372405 2 + . ID=LTnewLM_320042100 LTnewLM_32 AUGUSTUS mRNA 1363958 1372405 1 + . ID=LTnewLM_320042100.1;Parent=LTnewLM_320042100 LTnewLM_32 AUGUSTUS CDS 1363958 1372405 1 + 0 ID=LTnewLM_320042100.1:CDS:1;Parent=LTnewLM_320042100.1 LTnewLM_32 AUGUSTUS mRNA 1371845 1372405 1 + . ID=LTnewLM_320042100.2;Parent=LTnewLM_320042100 LTnewLM_32 AUGUSTUS CDS 1371845 1372405 1 + 0 ID=LTnewLM_320042100.2:CDS:1;Parent=LTnewLM_320042100.2 ### LTnewLM_32 . polypeptide 1363958 1372405 . + . ID=LTnewLM_320042100.1:pep;Derives_from=LTnewLM_320042100.1;orthologous_to=LTnewLM_320042100.2,LmjF.32.3410_mRNA;ortholog_cluster=OG0000449;product=term%3DDopey%2C N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04118 LTnewLM_32 Pfam protein_match 1364471 1365394 . + . Parent=LTnewLM_320042100.1:pep;Name=PF04118;signature_desc=Dopey%2C N-terminal ### LTnewLM_32 . polypeptide 1371845 1372405 . + . ID=LTnewLM_320042100.2:pep;Derives_from=LTnewLM_320042100.2;orthologous_to=LTnewLM_320042100.1,LmjF.32.3410_mRNA;ortholog_cluster=OG0000449;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1373438 1375732 1 + . ID=LTnewLM_320042200 LTnewLM_32 AUGUSTUS mRNA 1373438 1375732 1 + . ID=LTnewLM_320042200.1;Parent=LTnewLM_320042200 LTnewLM_32 AUGUSTUS CDS 1373438 1375732 1 + 0 ID=LTnewLM_320042200.1:CDS:1;Parent=LTnewLM_320042200.1 ### LTnewLM_32 . polypeptide 1373438 1375732 . + . ID=LTnewLM_320042200.1:pep;Derives_from=LTnewLM_320042200.1;orthologous_to=LmjF.32.3420_mRNA;ortholog_cluster=OG0004960;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1377722 1380550 1 + . ID=LTnewLM_320042300 LTnewLM_32 AUGUSTUS mRNA 1377722 1380550 1 + . ID=LTnewLM_320042300.1;Parent=LTnewLM_320042300 LTnewLM_32 AUGUSTUS CDS 1377722 1380550 1 + 0 ID=LTnewLM_320042300.1:CDS:1;Parent=LTnewLM_320042300.1 ### LTnewLM_32 . polypeptide 1377722 1380550 . + . ID=LTnewLM_320042300.1:pep;Derives_from=LTnewLM_320042300.1;orthologous_to=LmjF.32.3430_mRNA;ortholog_cluster=OG0004961;product=term%3DUncharacterised protein family UPF0564%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10595 LTnewLM_32 Pfam protein_match 1379342 1379956 . + . Parent=LTnewLM_320042300.1:pep;Name=PF10595;signature_desc=Uncharacterised protein family UPF0564 ### LTnewLM_32 AUGUSTUS gene 1381585 1383912 1 + . ID=LTnewLM_320042400 LTnewLM_32 AUGUSTUS mRNA 1381585 1383912 1 + . ID=LTnewLM_320042400.1;Parent=LTnewLM_320042400 LTnewLM_32 AUGUSTUS CDS 1381585 1383912 1 + 0 ID=LTnewLM_320042400.1:CDS:1;Parent=LTnewLM_320042400.1 ### LTnewLM_32 . polypeptide 1381585 1383912 . + . ID=LTnewLM_320042400.1:pep;Derives_from=LTnewLM_320042400.1;orthologous_to=LmjF.32.3440_mRNA;ortholog_cluster=OG0004962;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 1386486 1388378 . + . ID=LTnewLM_320042500;coverage=1.0;sequence_ID=0.929;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.3450_0 LTnewLM_32 Liftoff mRNA 1386486 1388378 . + . ID=LTnewLM_320042500.1;Parent=LTnewLM_320042500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1386486 1388378 . + 0 ID=LTnewLM_320042500.1:CDS:1;Parent=LTnewLM_320042500.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1386486 1388378 . + . ID=LTnewLM_320042500.1:pep;Derives_from=LTnewLM_320042500.1;orthologous_to=LmjF.32.3450_mRNA;ortholog_cluster=OG0004963;product=term%3Dzinc-finger of a C2HC-type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13913 LTnewLM_32 Pfam protein_match 1386777 1386839 . + . Parent=LTnewLM_320042500.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_32 Pfam protein_match 1387095 1387163 . + . Parent=LTnewLM_320042500.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_32 Pfam protein_match 1388094 1388159 . + . Parent=LTnewLM_320042500.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type ### LTnewLM_32 AUGUSTUS gene 1390388 1391326 1 + . ID=LTnewLM_320042600 LTnewLM_32 AUGUSTUS mRNA 1390388 1391326 1 + . ID=LTnewLM_320042600.1;Parent=LTnewLM_320042600 LTnewLM_32 AUGUSTUS CDS 1390388 1391326 1 + 0 ID=LTnewLM_320042600.1:CDS:1;Parent=LTnewLM_320042600.1 ### LTnewLM_32 . polypeptide 1390388 1391326 . + . ID=LTnewLM_320042600.1:pep;Derives_from=LTnewLM_320042600.1;orthologous_to=LmjF.32.3460_mRNA;ortholog_cluster=OG0004964;product=term%3D3' exoribonuclease family%2C domain 1/3' exoribonuclease family%2C domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01138|Pfam:PF03725 LTnewLM_32 Pfam protein_match 1390658 1391026 . + . Parent=LTnewLM_320042600.1:pep;Name=PF01138;signature_desc=3' exoribonuclease family%2C domain 1 LTnewLM_32 Pfam protein_match 1391087 1391242 . + . Parent=LTnewLM_320042600.1:pep;Name=PF03725;signature_desc=3' exoribonuclease family%2C domain 2 ### LTnewLM_32 . pseudogene 1392116 1394644 . + . ID=LTnewLM_320042700:pseudogene;coverage=0.990;sequence_ID=0.932;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.3470_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1392116 1394644 . + . ID=LTnewLM_320042700.1;Parent=LTnewLM_320042700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1392612 1394644 . + . ID=LTnewLM_320042700.1:pseudogenic_exon:1;Parent=LTnewLM_320042700.1;extra_copy_number=0 LTnewLM_32 . pseudogenic_transcript 1392814 1394644 . + . ID=LTnewLM_320042700.2;Parent=LTnewLM_320042700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1392953 1394644 . + . ID=LTnewLM_320042700.2:pseudogenic_exon:1;Parent=LTnewLM_320042700.2;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1392612 1394644 . + . ID=LTnewLM_320042700.1:pep;Derives_from=LTnewLM_320042700.1;product=term%3Dhypothetical protein ### LTnewLM_32 . polypeptide 1392953 1394644 . + . ID=LTnewLM_320042700.2:pep;Derives_from=LTnewLM_320042700.2;orthologous_to=LmjF.32.3470.1_mRNA,LmjF.32.3470.2_mRNA;ortholog_cluster=OG0000540;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_32 Pfam protein_match 1394312 1394506 . + . Parent=LTnewLM_320042700.2:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_32 AUGUSTUS gene 1395639 1397549 1 + . ID=LTnewLM_320042800 LTnewLM_32 AUGUSTUS mRNA 1395639 1397549 1 + . ID=LTnewLM_320042800.1;Parent=LTnewLM_320042800 LTnewLM_32 AUGUSTUS CDS 1395639 1397549 1 + 0 ID=LTnewLM_320042800.1:CDS:1;Parent=LTnewLM_320042800.1 ### LTnewLM_32 . polypeptide 1395639 1397549 . + . ID=LTnewLM_320042800.1:pep;Derives_from=LTnewLM_320042800.1;orthologous_to=LmjF.32.3480_mRNA;ortholog_cluster=OG0004965;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1399092 1399316 1 + . ID=LTnewLM_320042900 LTnewLM_32 AUGUSTUS mRNA 1399092 1399316 1 + . ID=LTnewLM_320042900.1;Parent=LTnewLM_320042900 LTnewLM_32 AUGUSTUS CDS 1399092 1399316 1 + 0 ID=LTnewLM_320042900.1:CDS:1;Parent=LTnewLM_320042900.1 ### LTnewLM_32 . polypeptide 1399092 1399316 . + . ID=LTnewLM_320042900.1:pep;Derives_from=LTnewLM_320042900.1;product=term%3Dhypothetical protein ### LTnewLM_32 AUGUSTUS gene 1400476 1402533 1 + . ID=LTnewLM_320043000 LTnewLM_32 AUGUSTUS mRNA 1400476 1402533 1 + . ID=LTnewLM_320043000.1;Parent=LTnewLM_320043000 LTnewLM_32 AUGUSTUS CDS 1400476 1402533 1 + 0 ID=LTnewLM_320043000.1:CDS:1;Parent=LTnewLM_320043000.1 ### LTnewLM_32 . polypeptide 1400476 1402533 . + . ID=LTnewLM_320043000.1:pep;Derives_from=LTnewLM_320043000.1;orthologous_to=LmjF.32.3490_mRNA;ortholog_cluster=OG0004966;product=term%3DDEAD/DEAH box helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270;Ontology_term=GO:0003676,GO:0005524 LTnewLM_32 Pfam protein_match 1400860 1401495 . + . Parent=LTnewLM_320043000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_32 . pseudogene 1403693 1405050 . + . ID=LTnewLM_320043100:pseudogene;coverage=0.986;sequence_ID=0.919;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3548_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1403693 1405050 . + . ID=LTnewLM_320043100.1;Parent=LTnewLM_320043100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1403693 1405050 . + . ID=LTnewLM_320043100.1:pseudogenic_exon:1;Parent=LTnewLM_320043100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1403693 1405050 . + . ID=LTnewLM_320043100.1:pep;Derives_from=LTnewLM_320043100.1;orthologous_to=LmjF.32.3500_mRNA,LmjF.32.3502_mRNA,LmjF.32.3504_mRNA,LmjF.32.3506_mRNA,LmjF.32.3508_mRNA,LmjF.32.3510_mRNA,LmjF.32.3512_mRNA,LmjF.32.3515_mRNA,LmjF.32.3520_mRNA,LmjF.32.3530_mRNA,LmjF.32.3535_mRNA,LmjF.32.3538_mRNA,LmjF.32.3540_mRNA,LmjF.32.3542_mRNA,LmjF.32.3544_mRNA,LmjF.32.3546_mRNA,LmjF.32.3548_mRNA;ortholog_cluster=OG0000006;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1407058 1408383 1 + . ID=LTnewLM_320043200 LTnewLM_32 AUGUSTUS mRNA 1407058 1408383 1 + . ID=LTnewLM_320043200.1;Parent=LTnewLM_320043200 LTnewLM_32 AUGUSTUS CDS 1407058 1408383 1 + 0 ID=LTnewLM_320043200.1:CDS:1;Parent=LTnewLM_320043200.1 ### LTnewLM_32 . polypeptide 1407058 1408383 . + . ID=LTnewLM_320043200.1:pep;Derives_from=LTnewLM_320043200.1;orthologous_to=LmjF.32.3550_mRNA;ortholog_cluster=OG0004967;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1409345 1409728 1 + . ID=LTnewLM_320043300 LTnewLM_32 AUGUSTUS mRNA 1409345 1409728 1 + . ID=LTnewLM_320043300.1;Parent=LTnewLM_320043300 LTnewLM_32 AUGUSTUS CDS 1409345 1409728 1 + 0 ID=LTnewLM_320043300.1:CDS:1;Parent=LTnewLM_320043300.1 ### LTnewLM_32 . polypeptide 1409345 1409728 . + . ID=LTnewLM_320043300.1:pep;Derives_from=LTnewLM_320043300.1;orthologous_to=LmjF.32.3555_mRNA;ortholog_cluster=OG0004968;product=term%3DRoadblock/LC7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03259 LTnewLM_32 Pfam protein_match 1409363 1409524 . + . Parent=LTnewLM_320043300.1:pep;Name=PF03259;signature_desc=Roadblock/LC7 domain ### LTnewLM_32 AUGUSTUS gene 1410566 1412287 1 + . ID=LTnewLM_320043400 LTnewLM_32 AUGUSTUS mRNA 1410566 1412287 1 + . ID=LTnewLM_320043400.1;Parent=LTnewLM_320043400 LTnewLM_32 AUGUSTUS CDS 1410566 1412287 1 + 0 ID=LTnewLM_320043400.1:CDS:1;Parent=LTnewLM_320043400.1 ### LTnewLM_32 . polypeptide 1410566 1412287 . + . ID=LTnewLM_320043400.1:pep;Derives_from=LTnewLM_320043400.1;orthologous_to=LmjF.32.3560_mRNA;ortholog_cluster=OG0004969;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1413183 1416866 1 + . ID=LTnewLM_320043500 LTnewLM_32 AUGUSTUS mRNA 1413183 1416866 1 + . ID=LTnewLM_320043500.1;Parent=LTnewLM_320043500 LTnewLM_32 AUGUSTUS CDS 1413183 1416866 1 + 0 ID=LTnewLM_320043500.1:CDS:1;Parent=LTnewLM_320043500.1 ### LTnewLM_32 . polypeptide 1413183 1416866 . + . ID=LTnewLM_320043500.1:pep;Derives_from=LTnewLM_320043500.1;orthologous_to=LmjF.32.3570_mRNA;ortholog_cluster=OG0004970;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1417594 1417947 1 + . ID=LTnewLM_320043600 LTnewLM_32 AUGUSTUS mRNA 1417594 1417947 1 + . ID=LTnewLM_320043600.1;Parent=LTnewLM_320043600 LTnewLM_32 AUGUSTUS CDS 1417594 1417947 1 + 0 ID=LTnewLM_320043600.1:CDS:1;Parent=LTnewLM_320043600.1 ### LTnewLM_32 . polypeptide 1417594 1417947 . + . ID=LTnewLM_320043600.1:pep;Derives_from=LTnewLM_320043600.1;orthologous_to=LmjF.32.3590_mRNA;ortholog_cluster=OG0004971;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1418785 1419387 1 + . ID=LTnewLM_320043700 LTnewLM_32 AUGUSTUS mRNA 1418785 1419387 1 + . ID=LTnewLM_320043700.1;Parent=LTnewLM_320043700 LTnewLM_32 AUGUSTUS CDS 1418785 1419387 1 + 0 ID=LTnewLM_320043700.1:CDS:1;Parent=LTnewLM_320043700.1 ### LTnewLM_32 . polypeptide 1418785 1419387 . + . ID=LTnewLM_320043700.1:pep;Derives_from=LTnewLM_320043700.1;orthologous_to=LmjF.32.3600_mRNA;ortholog_cluster=OG0004972;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1420152 1420595 1 + . ID=LTnewLM_320043800 LTnewLM_32 AUGUSTUS mRNA 1420152 1420595 1 + . ID=LTnewLM_320043800.1;Parent=LTnewLM_320043800 LTnewLM_32 AUGUSTUS CDS 1420152 1420595 1 + 0 ID=LTnewLM_320043800.1:CDS:1;Parent=LTnewLM_320043800.1 ### LTnewLM_32 . polypeptide 1420152 1420595 . + . ID=LTnewLM_320043800.1:pep;Derives_from=LTnewLM_320043800.1;orthologous_to=LmjF.32.3610_mRNA;ortholog_cluster=OG0004973;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1421818 1422672 1 + . ID=LTnewLM_320043900 LTnewLM_32 AUGUSTUS mRNA 1421818 1422672 1 + . ID=LTnewLM_320043900.1;Parent=LTnewLM_320043900 LTnewLM_32 AUGUSTUS CDS 1421818 1422672 1 + 0 ID=LTnewLM_320043900.1:CDS:1;Parent=LTnewLM_320043900.1 ### LTnewLM_32 . polypeptide 1421818 1422672 . + . ID=LTnewLM_320043900.1:pep;Derives_from=LTnewLM_320043900.1;orthologous_to=LmjF.32.3620_mRNA;ortholog_cluster=OG0004974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 . pseudogene 1423321 1424640 . + . ID=LTnewLM_320044000:pseudogene;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3630_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1423321 1424640 . + . ID=LTnewLM_320044000.1;Parent=LTnewLM_320044000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1423321 1424640 . + . ID=LTnewLM_320044000.1:pseudogenic_exon:1;Parent=LTnewLM_320044000.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1423321 1424640 . + . ID=LTnewLM_320044000.1:pep;Derives_from=LTnewLM_320044000.1;orthologous_to=LmjF.32.3630_mRNA;ortholog_cluster=OG0007627;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 1425022 1426362 . + . ID=LTnewLM_320044100;coverage=0.993;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3640_0 LTnewLM_32 Liftoff mRNA 1425022 1426362 . + . ID=LTnewLM_320044100.1;Parent=LTnewLM_320044100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1425022 1426362 . + 0 ID=LTnewLM_320044100.1:CDS:1;Parent=LTnewLM_320044100.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1425022 1426362 . + . ID=LTnewLM_320044100.1:pep;Derives_from=LTnewLM_320044100.1;orthologous_to=LmjF.32.3640_mRNA;ortholog_cluster=OG0004975;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1426905 1427993 1 + . ID=LTnewLM_320044200 LTnewLM_32 AUGUSTUS mRNA 1426905 1427993 1 + . ID=LTnewLM_320044200.1;Parent=LTnewLM_320044200 LTnewLM_32 AUGUSTUS CDS 1426905 1427993 1 + 0 ID=LTnewLM_320044200.1:CDS:1;Parent=LTnewLM_320044200.1 ### LTnewLM_32 . polypeptide 1426905 1427993 . + . ID=LTnewLM_320044200.1:pep;Derives_from=LTnewLM_320044200.1;orthologous_to=LTnewLM_000005300.1,LTnewLM_320044300.1,LmjF.32.3650_mRNA,LmjF.32.3660_mRNA,LmjF.32.3670_mRNA;ortholog_cluster=OG0000049;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_32 Pfam protein_match 1426968 1427492 . + . Parent=LTnewLM_320044200.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_32 Pfam protein_match 1426968 1427960 . + . Parent=LTnewLM_320044200.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_32 . pseudogene 1431395 1432560 . + . ID=LTnewLM_320044300:pseudogene;coverage=1.0;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3670_0;has_internal_stop=true LTnewLM_32 . pseudogenic_transcript 1431395 1432560 . + . ID=LTnewLM_320044300.1;Parent=LTnewLM_320044300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_32 . pseudogenic_exon 1431395 1432560 . + . ID=LTnewLM_320044300.1:pseudogenic_exon:1;Parent=LTnewLM_320044300.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1431395 1432560 . + . ID=LTnewLM_320044300.1:pep;Derives_from=LTnewLM_320044300.1;orthologous_to=LTnewLM_000005300.1,LTnewLM_320044200.1,LmjF.32.3650_mRNA,LmjF.32.3660_mRNA,LmjF.32.3670_mRNA;ortholog_cluster=OG0000049;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113;Ontology_term=GO:0003824,GO:0008152 LTnewLM_32 Pfam protein_match 1431458 1431982 . + . Parent=LTnewLM_320044300.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_32 Pfam protein_match 1431458 1432447 . + . Parent=LTnewLM_320044300.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase ### LTnewLM_32 AUGUSTUS gene 1433485 1434600 1 + . ID=LTnewLM_320044400 LTnewLM_32 AUGUSTUS mRNA 1433485 1434600 1 + . ID=LTnewLM_320044400.1;Parent=LTnewLM_320044400 LTnewLM_32 AUGUSTUS CDS 1433485 1434600 1 + 0 ID=LTnewLM_320044400.1:CDS:1;Parent=LTnewLM_320044400.1 ### LTnewLM_32 . polypeptide 1433485 1434600 . + . ID=LTnewLM_320044400.1:pep;Derives_from=LTnewLM_320044400.1;orthologous_to=LmjF.32.3680_mRNA;ortholog_cluster=OG0004976;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16113|Pfam:PF00378;Ontology_term=GO:0003824,GO:0008152 LTnewLM_32 Pfam protein_match 1433545 1434531 . + . Parent=LTnewLM_320044400.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_32 Pfam protein_match 1433548 1434066 . + . Parent=LTnewLM_320044400.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_32 AUGUSTUS gene 1437932 1440901 1 + . ID=LTnewLM_320044500 LTnewLM_32 AUGUSTUS mRNA 1437932 1440901 1 + . ID=LTnewLM_320044500.1;Parent=LTnewLM_320044500 LTnewLM_32 AUGUSTUS CDS 1437932 1440901 1 + 0 ID=LTnewLM_320044500.1:CDS:1;Parent=LTnewLM_320044500.1 ### LTnewLM_32 . polypeptide 1437932 1440901 . + . ID=LTnewLM_320044500.1:pep;Derives_from=LTnewLM_320044500.1;orthologous_to=LmjF.32.3690_mRNA;ortholog_cluster=OG0004977;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1442081 1444537 1 + . ID=LTnewLM_320044600 LTnewLM_32 AUGUSTUS mRNA 1442081 1444537 1 + . ID=LTnewLM_320044600.1;Parent=LTnewLM_320044600 LTnewLM_32 AUGUSTUS CDS 1442081 1444537 1 + 0 ID=LTnewLM_320044600.1:CDS:1;Parent=LTnewLM_320044600.1 ### LTnewLM_32 . polypeptide 1442081 1444537 . + . ID=LTnewLM_320044600.1:pep;Derives_from=LTnewLM_320044600.1;orthologous_to=LmjF.32.3700_mRNA;ortholog_cluster=OG0004978;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1445170 1445577 1 + . ID=LTnewLM_320044700 LTnewLM_32 AUGUSTUS mRNA 1445170 1445577 1 + . ID=LTnewLM_320044700.1;Parent=LTnewLM_320044700 LTnewLM_32 AUGUSTUS CDS 1445170 1445577 1 + 0 ID=LTnewLM_320044700.1:CDS:1;Parent=LTnewLM_320044700.1 ### LTnewLM_32 . polypeptide 1445170 1445577 . + . ID=LTnewLM_320044700.1:pep;Derives_from=LTnewLM_320044700.1;orthologous_to=LmjF.32.3710_mRNA;ortholog_cluster=OG0004979;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 Liftoff gene 1446647 1448536 . + . ID=LTnewLM_320044800;coverage=0.999;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.32.3720_0 LTnewLM_32 Liftoff mRNA 1446647 1448536 . + . ID=LTnewLM_320044800.1;Parent=LTnewLM_320044800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1446647 1448536 . + 0 ID=LTnewLM_320044800.1:CDS:1;Parent=LTnewLM_320044800.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1446647 1448536 . + . ID=LTnewLM_320044800.1:pep;Derives_from=LTnewLM_320044800.1;orthologous_to=LmjF.32.3720_mRNA;ortholog_cluster=OG0004980;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_32 Pfam protein_match 1447145 1447657 . + . Parent=LTnewLM_320044800.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 LTnewLM_32 Pfam protein_match 1447802 1448422 . + . Parent=LTnewLM_320044800.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_32 AUGUSTUS gene 1449161 1449778 1 + . ID=LTnewLM_320044900 LTnewLM_32 AUGUSTUS mRNA 1449161 1449778 1 + . ID=LTnewLM_320044900.1;Parent=LTnewLM_320044900 LTnewLM_32 AUGUSTUS CDS 1449161 1449778 1 + 0 ID=LTnewLM_320044900.1:CDS:1;Parent=LTnewLM_320044900.1 ### LTnewLM_32 . polypeptide 1449161 1449778 . + . ID=LTnewLM_320044900.1:pep;Derives_from=LTnewLM_320044900.1;orthologous_to=LmjF.32.3730_mRNA;ortholog_cluster=OG0004981;product=term%3DTransmembrane protein 18%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14770 LTnewLM_32 Pfam protein_match 1449332 1449700 . + . Parent=LTnewLM_320044900.1:pep;Name=PF14770;signature_desc=Transmembrane protein 18 ### LTnewLM_32 AUGUSTUS gene 1450602 1451069 1 + . ID=LTnewLM_320045000 LTnewLM_32 AUGUSTUS mRNA 1450602 1451069 1 + . ID=LTnewLM_320045000.1;Parent=LTnewLM_320045000 LTnewLM_32 AUGUSTUS CDS 1450602 1451069 1 + 0 ID=LTnewLM_320045000.1:CDS:1;Parent=LTnewLM_320045000.1 ### LTnewLM_32 . polypeptide 1450602 1451069 . + . ID=LTnewLM_320045000.1:pep;Derives_from=LTnewLM_320045000.1;orthologous_to=LmjF.32.3740_mRNA;ortholog_cluster=OG0004982;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1451892 1452773 1 + . ID=LTnewLM_320045100 LTnewLM_32 AUGUSTUS mRNA 1451892 1452773 1 + . ID=LTnewLM_320045100.1;Parent=LTnewLM_320045100 LTnewLM_32 AUGUSTUS CDS 1451892 1452773 1 + 0 ID=LTnewLM_320045100.1:CDS:1;Parent=LTnewLM_320045100.1 ### LTnewLM_32 . polypeptide 1451892 1452773 . + . ID=LTnewLM_320045100.1:pep;Derives_from=LTnewLM_320045100.1;orthologous_to=LmjF.32.3750_mRNA;ortholog_cluster=OG0004983;product=term%3DMethyltransferase TYW3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02676 LTnewLM_32 Pfam protein_match 1451964 1452716 . + . Parent=LTnewLM_320045100.1:pep;Name=PF02676;signature_desc=Methyltransferase TYW3 ### LTnewLM_32 AUGUSTUS gene 1453588 1455414 1 + . ID=LTnewLM_320045200 LTnewLM_32 AUGUSTUS mRNA 1453588 1455414 1 + . ID=LTnewLM_320045200.1;Parent=LTnewLM_320045200 LTnewLM_32 AUGUSTUS CDS 1453588 1455414 1 + 0 ID=LTnewLM_320045200.1:CDS:1;Parent=LTnewLM_320045200.1 ### LTnewLM_32 . polypeptide 1453588 1455414 . + . ID=LTnewLM_320045200.1:pep;Derives_from=LTnewLM_320045200.1;orthologous_to=LmjF.32.3760_mRNA;ortholog_cluster=OG0004984;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1456513 1456911 1 + . ID=LTnewLM_320045300 LTnewLM_32 AUGUSTUS mRNA 1456513 1456911 1 + . ID=LTnewLM_320045300.1;Parent=LTnewLM_320045300 LTnewLM_32 AUGUSTUS CDS 1456513 1456911 1 + 0 ID=LTnewLM_320045300.1:CDS:1;Parent=LTnewLM_320045300.1 ### LTnewLM_32 . polypeptide 1456513 1456911 . + . ID=LTnewLM_320045300.1:pep;Derives_from=LTnewLM_320045300.1;orthologous_to=LmjF.32.3770_mRNA;ortholog_cluster=OG0004985;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1458917 1459327 1 + . ID=LTnewLM_320045400 LTnewLM_32 AUGUSTUS mRNA 1458917 1459327 1 + . ID=LTnewLM_320045400.1;Parent=LTnewLM_320045400 LTnewLM_32 AUGUSTUS CDS 1458917 1459327 1 + 0 ID=LTnewLM_320045400.1:CDS:1;Parent=LTnewLM_320045400.1 ### LTnewLM_32 . polypeptide 1458917 1459327 . + . ID=LTnewLM_320045400.1:pep;Derives_from=LTnewLM_320045400.1;orthologous_to=LmjF.32.3780_mRNA;ortholog_cluster=OG0004986;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1461074 1461373 1 + . ID=LTnewLM_320045500 LTnewLM_32 AUGUSTUS mRNA 1461074 1461373 1 + . ID=LTnewLM_320045500.1;Parent=LTnewLM_320045500 LTnewLM_32 AUGUSTUS CDS 1461074 1461373 1 + 0 ID=LTnewLM_320045500.1:CDS:1;Parent=LTnewLM_320045500.1 ### LTnewLM_32 . polypeptide 1461074 1461373 . + . ID=LTnewLM_320045500.1:pep;Derives_from=LTnewLM_320045500.1;orthologous_to=LmjF.32.3790_mRNA;ortholog_cluster=OG0004987;product=term%3DCyclin-dependent kinase regulatory subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01111;Ontology_term=GO:0016538,GO:0007049 LTnewLM_32 Pfam protein_match 1461164 1461361 . + . Parent=LTnewLM_320045500.1:pep;Name=PF01111;signature_desc=Cyclin-dependent kinase regulatory subunit;Ontology_term=GO:0016538,GO:0007049 ### LTnewLM_32 AUGUSTUS gene 1462738 1463412 1 + . ID=LTnewLM_320045600 LTnewLM_32 AUGUSTUS mRNA 1462738 1463412 1 + . ID=LTnewLM_320045600.1;Parent=LTnewLM_320045600 LTnewLM_32 AUGUSTUS CDS 1462738 1463412 1 + 0 ID=LTnewLM_320045600.1:CDS:1;Parent=LTnewLM_320045600.1 ### LTnewLM_32 . polypeptide 1462738 1463412 . + . ID=LTnewLM_320045600.1:pep;Derives_from=LTnewLM_320045600.1;orthologous_to=LmjF.32.3800_mRNA;ortholog_cluster=OG0004988;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1464071 1465804 1 + . ID=LTnewLM_320045700 LTnewLM_32 AUGUSTUS mRNA 1464071 1465804 1 + . ID=LTnewLM_320045700.1;Parent=LTnewLM_320045700 LTnewLM_32 AUGUSTUS CDS 1464071 1465804 1 + 0 ID=LTnewLM_320045700.1:CDS:1;Parent=LTnewLM_320045700.1 ### LTnewLM_32 . polypeptide 1464071 1465804 . + . ID=LTnewLM_320045700.1:pep;Derives_from=LTnewLM_320045700.1;orthologous_to=LmjF.32.3810_mRNA;ortholog_cluster=OG0004989;product=term%3DSHQ1 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04925 LTnewLM_32 Pfam protein_match 1465139 1465636 . + . Parent=LTnewLM_320045700.1:pep;Name=PF04925;signature_desc=SHQ1 protein ### LTnewLM_32 AUGUSTUS gene 1466645 1467820 1 + . ID=LTnewLM_320045800 LTnewLM_32 AUGUSTUS mRNA 1466645 1467820 1 + . ID=LTnewLM_320045800.1;Parent=LTnewLM_320045800 LTnewLM_32 AUGUSTUS CDS 1466645 1467820 1 + 0 ID=LTnewLM_320045800.1:CDS:1;Parent=LTnewLM_320045800.1 ### LTnewLM_32 . polypeptide 1466645 1467820 . + . ID=LTnewLM_320045800.1:pep;Derives_from=LTnewLM_320045800.1;orthologous_to=LmjF.32.3820_mRNA;ortholog_cluster=OG0004990;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1468844 1469395 1 + . ID=LTnewLM_320045900 LTnewLM_32 AUGUSTUS mRNA 1468844 1469395 1 + . ID=LTnewLM_320045900.1;Parent=LTnewLM_320045900 LTnewLM_32 AUGUSTUS CDS 1468844 1469395 1 + 0 ID=LTnewLM_320045900.1:CDS:1;Parent=LTnewLM_320045900.1 ### LTnewLM_32 . polypeptide 1468844 1469395 . + . ID=LTnewLM_320045900.1:pep;Derives_from=LTnewLM_320045900.1;orthologous_to=LmjF.32.3830_mRNA;ortholog_cluster=OG0004991;product=term%3DCornichon protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03311;Ontology_term=GO:0016020,GO:0035556 LTnewLM_32 Pfam protein_match 1468997 1469347 . + . Parent=LTnewLM_320045900.1:pep;Name=PF03311;signature_desc=Cornichon protein;Ontology_term=GO:0035556,GO:0016020 ### LTnewLM_32 AUGUSTUS gene 1470521 1471087 1 + . ID=LTnewLM_320046000 LTnewLM_32 AUGUSTUS mRNA 1470521 1471087 1 + . ID=LTnewLM_320046000.1;Parent=LTnewLM_320046000 LTnewLM_32 AUGUSTUS CDS 1470521 1471087 1 + 0 ID=LTnewLM_320046000.1:CDS:1;Parent=LTnewLM_320046000.1 ### LTnewLM_32 . polypeptide 1470521 1471087 . + . ID=LTnewLM_320046000.1:pep;Derives_from=LTnewLM_320046000.1;orthologous_to=LmjF.32.3840_mRNA;ortholog_cluster=OG0004992;product=term%3DCornichon protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03311;Ontology_term=GO:0016020,GO:0035556 LTnewLM_32 Pfam protein_match 1470695 1471054 . + . Parent=LTnewLM_320046000.1:pep;Name=PF03311;signature_desc=Cornichon protein;Ontology_term=GO:0035556,GO:0016020 ### LTnewLM_32 AUGUSTUS gene 1472026 1473006 1 + . ID=LTnewLM_320046100 LTnewLM_32 AUGUSTUS mRNA 1472026 1473006 1 + . ID=LTnewLM_320046100.1;Parent=LTnewLM_320046100 LTnewLM_32 AUGUSTUS CDS 1472026 1473006 1 + 0 ID=LTnewLM_320046100.1:CDS:1;Parent=LTnewLM_320046100.1 ### LTnewLM_32 . polypeptide 1472026 1473006 . + . ID=LTnewLM_320046100.1:pep;Derives_from=LTnewLM_320046100.1;orthologous_to=LmjF.32.3850_mRNA;ortholog_cluster=OG0004993;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1474671 1477547 1 + . ID=LTnewLM_320046200 LTnewLM_32 AUGUSTUS mRNA 1474671 1477547 1 + . ID=LTnewLM_320046200.1;Parent=LTnewLM_320046200 LTnewLM_32 AUGUSTUS CDS 1474671 1477547 1 + 0 ID=LTnewLM_320046200.1:CDS:1;Parent=LTnewLM_320046200.1 ### LTnewLM_32 . polypeptide 1474671 1477547 . + . ID=LTnewLM_320046200.1:pep;Derives_from=LTnewLM_320046200.1;orthologous_to=LmjF.32.3860_mRNA;ortholog_cluster=OG0004994;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1479786 1482938 1 + . ID=LTnewLM_320046300 LTnewLM_32 AUGUSTUS mRNA 1479786 1482938 1 + . ID=LTnewLM_320046300.1;Parent=LTnewLM_320046300 LTnewLM_32 AUGUSTUS CDS 1479786 1482938 1 + 0 ID=LTnewLM_320046300.1:CDS:1;Parent=LTnewLM_320046300.1 ### LTnewLM_32 . polypeptide 1479786 1482938 . + . ID=LTnewLM_320046300.1:pep;Derives_from=LTnewLM_320046300.1;orthologous_to=LmjF.32.3870_mRNA;ortholog_cluster=OG0004995;product=term%3DMyosin head (motor domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00063;Ontology_term=GO:0003774,GO:0016459,GO:0005524 LTnewLM_32 Pfam protein_match 1479978 1481996 . + . Parent=LTnewLM_320046300.1:pep;Name=PF00063;signature_desc=Myosin head (motor domain);Ontology_term=GO:0003774,GO:0005524,GO:0016459 ### LTnewLM_32 AUGUSTUS gene 1486634 1487707 1 + . ID=LTnewLM_320046400 LTnewLM_32 AUGUSTUS mRNA 1486634 1487707 1 + . ID=LTnewLM_320046400.1;Parent=LTnewLM_320046400 LTnewLM_32 AUGUSTUS CDS 1486634 1487707 1 + 0 ID=LTnewLM_320046400.1:CDS:1;Parent=LTnewLM_320046400.1 ### LTnewLM_32 . polypeptide 1486634 1487707 . + . ID=LTnewLM_320046400.1:pep;Derives_from=LTnewLM_320046400.1;orthologous_to=LmjF.32.3880_mRNA;ortholog_cluster=OG0004996;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1489286 1490452 1 + . ID=LTnewLM_320046500 LTnewLM_32 AUGUSTUS mRNA 1489286 1490452 1 + . ID=LTnewLM_320046500.1;Parent=LTnewLM_320046500 LTnewLM_32 AUGUSTUS CDS 1489286 1490452 1 + 0 ID=LTnewLM_320046500.1:CDS:1;Parent=LTnewLM_320046500.1 ### LTnewLM_32 . polypeptide 1489286 1490452 . + . ID=LTnewLM_320046500.1:pep;Derives_from=LTnewLM_320046500.1;orthologous_to=LmjF.32.3890_mRNA;ortholog_cluster=OG0004997;product=term%3DPeptidase family C54%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03416 LTnewLM_32 Pfam protein_match 1489466 1490224 . + . Parent=LTnewLM_320046500.1:pep;Name=PF03416;signature_desc=Peptidase family C54 ### LTnewLM_32 AUGUSTUS gene 1491751 1492533 1 + . ID=LTnewLM_320046600 LTnewLM_32 AUGUSTUS mRNA 1491751 1492533 1 + . ID=LTnewLM_320046600.1;Parent=LTnewLM_320046600 LTnewLM_32 AUGUSTUS CDS 1491751 1492533 1 + 0 ID=LTnewLM_320046600.1:CDS:1;Parent=LTnewLM_320046600.1 ### LTnewLM_32 . polypeptide 1491751 1492533 . + . ID=LTnewLM_320046600.1:pep;Derives_from=LTnewLM_320046600.1;orthologous_to=LTnewLM_350019500.1,LTnewLM_350019600.1,LmjF.32.3900_mRNA,LmjF.35.1430_mRNA,LmjF.35.1440_mRNA;ortholog_cluster=OG0000066;product=term%3DRibosomal Proteins L2%2C RNA binding domain/Ribosomal Proteins L2%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00181|Pfam:PF03947;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_32 Pfam protein_match 1491784 1492014 . + . Parent=LTnewLM_320046600.1:pep;Name=PF00181;signature_desc=Ribosomal Proteins L2%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_32 Pfam protein_match 1492042 1492428 . + . Parent=LTnewLM_320046600.1:pep;Name=PF03947;signature_desc=Ribosomal Proteins L2%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_32 AUGUSTUS gene 1493603 1494532 1 + . ID=LTnewLM_320046700 LTnewLM_32 AUGUSTUS mRNA 1493603 1494532 1 + . ID=LTnewLM_320046700.1;Parent=LTnewLM_320046700 LTnewLM_32 AUGUSTUS CDS 1493603 1494532 1 + 0 ID=LTnewLM_320046700.1:CDS:1;Parent=LTnewLM_320046700.1 ### LTnewLM_32 . polypeptide 1493603 1494532 . + . ID=LTnewLM_320046700.1:pep;Derives_from=LTnewLM_320046700.1;orthologous_to=LmjF.32.3910_mRNA;ortholog_cluster=OG0004998;product=term%3DEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)/Endoplasmic reticulum vesicle transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13850|Pfam:PF07970 LTnewLM_32 Pfam protein_match 1493627 1493893 . + . Parent=LTnewLM_320046700.1:pep;Name=PF13850;signature_desc=Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) LTnewLM_32 Pfam protein_match 1493969 1494466 . + . Parent=LTnewLM_320046700.1:pep;Name=PF07970;signature_desc=Endoplasmic reticulum vesicle transporter ### LTnewLM_32 AUGUSTUS gene 1496025 1498445 1 + . ID=LTnewLM_320046800 LTnewLM_32 AUGUSTUS mRNA 1496025 1498445 1 + . ID=LTnewLM_320046800.1;Parent=LTnewLM_320046800 LTnewLM_32 AUGUSTUS CDS 1496025 1498445 1 + 0 ID=LTnewLM_320046800.1:CDS:1;Parent=LTnewLM_320046800.1 ### LTnewLM_32 . polypeptide 1496025 1498445 . + . ID=LTnewLM_320046800.1:pep;Derives_from=LTnewLM_320046800.1;orthologous_to=LmjF.32.3920_mRNA;ortholog_cluster=OG0004999;product=term%3DHelicase conserved C-terminal domain/Type III restriction enzyme%2C res subunit/SNF2-related domain/ERCC3/RAD25/XPB C-terminal helicase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13625|Pfam:PF04851|Pfam:PF00176|Pfam:PF16203|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_32 Pfam protein_match 1496109 1496471 . + . Parent=LTnewLM_320046800.1:pep;Name=PF13625;signature_desc=Helicase conserved C-terminal domain LTnewLM_32 Pfam protein_match 1496676 1497275 . + . Parent=LTnewLM_320046800.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_32 Pfam protein_match 1496733 1497203 . + . Parent=LTnewLM_320046800.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_32 Pfam protein_match 1497354 1497977 . + . Parent=LTnewLM_320046800.1:pep;Name=PF16203;signature_desc=ERCC3/RAD25/XPB C-terminal helicase LTnewLM_32 Pfam protein_match 1497522 1497824 . + . Parent=LTnewLM_320046800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_32 Liftoff gene 1503270 1515716 . + . ID=LTnewLM_320046900;coverage=1.0;sequence_ID=0.953;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.32.3930_0 LTnewLM_32 Liftoff mRNA 1503270 1515716 . + . ID=LTnewLM_320046900.1;Parent=LTnewLM_320046900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_32 Liftoff CDS 1503270 1515716 . + 0 ID=LTnewLM_320046900.1:CDS:1;Parent=LTnewLM_320046900.1;extra_copy_number=0 ### LTnewLM_32 . polypeptide 1503270 1515716 . + . ID=LTnewLM_320046900.1:pep;Derives_from=LTnewLM_320046900.1;orthologous_to=LmjF.32.3930_mRNA;ortholog_cluster=OG0005000;product=term%3DSPRY domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00622|Pfam:PF00632;Ontology_term=GO:0004842,GO:0005515 LTnewLM_32 Pfam protein_match 1508160 1508489 . + . Parent=LTnewLM_320046900.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1509411 1509584 . + . Parent=LTnewLM_320046900.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1513788 1514111 . + . Parent=LTnewLM_320046900.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_32 Pfam protein_match 1514913 1515707 . + . Parent=LTnewLM_320046900.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_32 AUGUSTUS gene 1517002 1518672 1 + . ID=LTnewLM_320047000 LTnewLM_32 AUGUSTUS mRNA 1517002 1518672 1 + . ID=LTnewLM_320047000.1;Parent=LTnewLM_320047000 LTnewLM_32 AUGUSTUS CDS 1517002 1518672 1 + 0 ID=LTnewLM_320047000.1:CDS:1;Parent=LTnewLM_320047000.1 ### LTnewLM_32 . polypeptide 1517002 1518672 . + . ID=LTnewLM_320047000.1:pep;Derives_from=LTnewLM_320047000.1;orthologous_to=LmjF.32.3940_mRNA;ortholog_cluster=OG0005001;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1519570 1522554 1 + . ID=LTnewLM_320047100 LTnewLM_32 AUGUSTUS mRNA 1519570 1522554 1 + . ID=LTnewLM_320047100.1;Parent=LTnewLM_320047100 LTnewLM_32 AUGUSTUS CDS 1519570 1522554 1 + 0 ID=LTnewLM_320047100.1:CDS:1;Parent=LTnewLM_320047100.1 ### LTnewLM_32 . polypeptide 1519570 1522554 . + . ID=LTnewLM_320047100.1:pep;Derives_from=LTnewLM_320047100.1;orthologous_to=LmjF.32.3950_mRNA;ortholog_cluster=OG0005002;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1523365 1523922 1 + . ID=LTnewLM_320047200 LTnewLM_32 AUGUSTUS mRNA 1523365 1523922 1 + . ID=LTnewLM_320047200.1;Parent=LTnewLM_320047200 LTnewLM_32 AUGUSTUS CDS 1523365 1523922 1 + 0 ID=LTnewLM_320047200.1:CDS:1;Parent=LTnewLM_320047200.1 ### LTnewLM_32 . polypeptide 1523365 1523922 . + . ID=LTnewLM_320047200.1:pep;Derives_from=LTnewLM_320047200.1;orthologous_to=LmjF.32.3960_mRNA;ortholog_cluster=OG0005003;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_32 AUGUSTUS gene 1525045 1527144 1 + . ID=LTnewLM_320047300 LTnewLM_32 AUGUSTUS mRNA 1525045 1527144 1 + . ID=LTnewLM_320047300.1;Parent=LTnewLM_320047300 LTnewLM_32 AUGUSTUS CDS 1525045 1527144 1 + 0 ID=LTnewLM_320047300.1:CDS:1;Parent=LTnewLM_320047300.1 ### LTnewLM_32 . polypeptide 1525045 1527144 . + . ID=LTnewLM_320047300.1:pep;Derives_from=LTnewLM_320047300.1;orthologous_to=LmjF.32.3970_mRNA;ortholog_cluster=OG0005004;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_32 Pfam protein_match 1525810 1526076 . + . Parent=LTnewLM_320047300.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_32 Pfam protein_match 1526257 1526496 . + . Parent=LTnewLM_320047300.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_32 AUGUSTUS gene 1528201 1529016 1 + . ID=LTnewLM_320047400 LTnewLM_32 AUGUSTUS mRNA 1528201 1529016 1 + . ID=LTnewLM_320047400.1;Parent=LTnewLM_320047400 LTnewLM_32 AUGUSTUS CDS 1528201 1529016 1 + 0 ID=LTnewLM_320047400.1:CDS:1;Parent=LTnewLM_320047400.1 ### LTnewLM_32 . polypeptide 1528201 1529016 . + . ID=LTnewLM_320047400.1:pep;Derives_from=LTnewLM_320047400.1;orthologous_to=LmjF.32.3980_mRNA;ortholog_cluster=OG0005005;product=term%3DGar1/Naf1 RNA binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04410;Ontology_term=GO:0042254,GO:0001522 LTnewLM_32 Pfam protein_match 1528507 1528659 . + . Parent=LTnewLM_320047400.1:pep;Name=PF04410;signature_desc=Gar1/Naf1 RNA binding region;Ontology_term=GO:0001522,GO:0042254 ### LTnewLM_32 AUGUSTUS gene 1532837 1533601 1 + . ID=LTnewLM_320047500 LTnewLM_32 AUGUSTUS mRNA 1532837 1533601 1 + . ID=LTnewLM_320047500.1;Parent=LTnewLM_320047500 LTnewLM_32 AUGUSTUS CDS 1532837 1533601 1 + 0 ID=LTnewLM_320047500.1:CDS:1;Parent=LTnewLM_320047500.1 ### LTnewLM_32 . polypeptide 1532837 1533601 . + . ID=LTnewLM_320047500.1:pep;Derives_from=LTnewLM_320047500.1;product=term%3DGDSL-like Lipase/Acylhydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13472 LTnewLM_32 Pfam protein_match 1532852 1533463 . + . Parent=LTnewLM_320047500.1:pep;Name=PF13472;signature_desc=GDSL-like Lipase/Acylhydrolase family ### LTnewLM_32 AUGUSTUS gene 1534527 1536317 1 + . ID=LTnewLM_320047600 LTnewLM_32 AUGUSTUS mRNA 1534527 1536317 1 + . ID=LTnewLM_320047600.1;Parent=LTnewLM_320047600 LTnewLM_32 AUGUSTUS CDS 1534527 1536317 1 + 0 ID=LTnewLM_320047600.1:CDS:1;Parent=LTnewLM_320047600.1 ### LTnewLM_32 . polypeptide 1534527 1536317 . + . ID=LTnewLM_320047600.1:pep;Derives_from=LTnewLM_320047600.1;orthologous_to=LmjF.05.1230_mRNA,LmjF.19.1650_mRNA,LmjF.32.3990_mRNA;ortholog_cluster=OG0000236;product=term%3DGlycosyl transferase family 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00535 LTnewLM_32 Pfam protein_match 1535169 1535438 . + . Parent=LTnewLM_320047600.1:pep;Name=PF00535;signature_desc=Glycosyl transferase family 2 ### LTnewLM_33 AUGUSTUS gene 1 9757 0.95 + . ID=LTnewLM_330005000;fiveEndPartial=true;Start_range=.,. LTnewLM_33 AUGUSTUS mRNA 1 9757 0.95 + . ID=LTnewLM_330005000.1;Parent=LTnewLM_330005000 LTnewLM_33 AUGUSTUS CDS 9303 9757 0.95 + 2 ID=LTnewLM_330005000.1:CDS:1;Parent=LTnewLM_330005000.1 ### LTnewLM_33 . contig 1 1515492 . + . Name=LTnewLM_CTG000034 LTnewLM_33 . polypeptide 9303 9757 . + . ID=LTnewLM_330005000.1:pep;Derives_from=LTnewLM_330005000.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 10673 11251 1 - . ID=LTnewLM_330005100 LTnewLM_33 AUGUSTUS mRNA 10673 11251 1 - . ID=LTnewLM_330005100.1;Parent=LTnewLM_330005100 LTnewLM_33 AUGUSTUS CDS 10673 11251 1 - 0 ID=LTnewLM_330005100.1:CDS:1;Parent=LTnewLM_330005100.1 ### LTnewLM_33 . polypeptide 10673 11251 . - . ID=LTnewLM_330005100.1:pep;Derives_from=LTnewLM_330005100.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 11616 14084 1 - . ID=LTnewLM_330005200 LTnewLM_33 AUGUSTUS mRNA 11616 14084 1 - . ID=LTnewLM_330005200.1;Parent=LTnewLM_330005200 LTnewLM_33 AUGUSTUS CDS 11616 14084 1 - 0 ID=LTnewLM_330005200.1:CDS:1;Parent=LTnewLM_330005200.1 ### LTnewLM_33 . polypeptide 11616 14084 . - . ID=LTnewLM_330005200.1:pep;Derives_from=LTnewLM_330005200.1;orthologous_to=LmjF.33.0010_mRNA;ortholog_cluster=OG0005006;product=term%3DLysM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01476 LTnewLM_33 Pfam protein_match 12141 12218 . - . Parent=LTnewLM_330005200.1:pep;Name=PF01476;signature_desc=LysM domain LTnewLM_33 Pfam protein_match 12558 12626 . - . Parent=LTnewLM_330005200.1:pep;Name=PF01476;signature_desc=LysM domain ### LTnewLM_33 AUGUSTUS gene 14619 14948 1 - . ID=LTnewLM_330005300 LTnewLM_33 AUGUSTUS mRNA 14619 14948 1 - . ID=LTnewLM_330005300.1;Parent=LTnewLM_330005300 LTnewLM_33 AUGUSTUS CDS 14619 14948 1 - 0 ID=LTnewLM_330005300.1:CDS:1;Parent=LTnewLM_330005300.1 ### LTnewLM_33 . polypeptide 14619 14948 . - . ID=LTnewLM_330005300.1:pep;Derives_from=LTnewLM_330005300.1;orthologous_to=LmjF.33.0020_mRNA;ortholog_cluster=OG0005007;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 15510 17180 1 - . ID=LTnewLM_330005400 LTnewLM_33 AUGUSTUS mRNA 15510 17180 1 - . ID=LTnewLM_330005400.1;Parent=LTnewLM_330005400 LTnewLM_33 AUGUSTUS CDS 15510 17180 1 - 0 ID=LTnewLM_330005400.1:CDS:1;Parent=LTnewLM_330005400.1 ### LTnewLM_33 . polypeptide 15510 17180 . - . ID=LTnewLM_330005400.1:pep;Derives_from=LTnewLM_330005400.1;orthologous_to=LmjF.33.0030_mRNA;ortholog_cluster=OG0005008;product=term%3DHerpesviridae UL52/UL70 DNA primase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03121;Ontology_term=GO:0003896,GO:0006260 LTnewLM_33 Pfam protein_match 15543 15677 . - . Parent=LTnewLM_330005400.1:pep;Name=PF03121;signature_desc=Herpesviridae UL52/UL70 DNA primase;Ontology_term=GO:0003896,GO:0006260 ### LTnewLM_33 AUGUSTUS gene 18305 19867 1 - . ID=LTnewLM_330005500 LTnewLM_33 AUGUSTUS mRNA 18305 19867 1 - . ID=LTnewLM_330005500.1;Parent=LTnewLM_330005500 LTnewLM_33 AUGUSTUS CDS 18305 19867 1 - 0 ID=LTnewLM_330005500.1:CDS:1;Parent=LTnewLM_330005500.1 ### LTnewLM_33 . polypeptide 18305 19867 . - . ID=LTnewLM_330005500.1:pep;Derives_from=LTnewLM_330005500.1;orthologous_to=LmjF.33.0040_mRNA;ortholog_cluster=OG0005009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 20596 21294 1 - . ID=LTnewLM_330005600 LTnewLM_33 AUGUSTUS mRNA 20596 21294 1 - . ID=LTnewLM_330005600.1;Parent=LTnewLM_330005600 LTnewLM_33 AUGUSTUS CDS 20596 21294 1 - 0 ID=LTnewLM_330005600.1:CDS:1;Parent=LTnewLM_330005600.1 ### LTnewLM_33 . polypeptide 20596 21294 . - . ID=LTnewLM_330005600.1:pep;Derives_from=LTnewLM_330005600.1;orthologous_to=LmjF.33.0050_mRNA;ortholog_cluster=OG0005010;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 21884 23194 1 - . ID=LTnewLM_330005700 LTnewLM_33 AUGUSTUS mRNA 21884 23194 1 - . ID=LTnewLM_330005700.1;Parent=LTnewLM_330005700 LTnewLM_33 AUGUSTUS CDS 21884 23194 1 - 0 ID=LTnewLM_330005700.1:CDS:1;Parent=LTnewLM_330005700.1 ### LTnewLM_33 . polypeptide 21884 23194 . - . ID=LTnewLM_330005700.1:pep;Derives_from=LTnewLM_330005700.1;orthologous_to=LmjF.33.0060_mRNA;ortholog_cluster=OG0005011;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 22034 22081 . - . Parent=LTnewLM_330005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 22418 22522 . - . Parent=LTnewLM_330005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 22670 22765 . - . Parent=LTnewLM_330005700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 23856 25943 1 - . ID=LTnewLM_330005800 LTnewLM_33 AUGUSTUS mRNA 23856 25943 1 - . ID=LTnewLM_330005800.1;Parent=LTnewLM_330005800 LTnewLM_33 AUGUSTUS CDS 23856 25943 1 - 0 ID=LTnewLM_330005800.1:CDS:1;Parent=LTnewLM_330005800.1 ### LTnewLM_33 . polypeptide 23856 25943 . - . ID=LTnewLM_330005800.1:pep;Derives_from=LTnewLM_330005800.1;orthologous_to=LmjF.33.0070_mRNA;ortholog_cluster=OG0005012;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 26721 27288 . - . ID=LTnewLM_330005900:pseudogene;coverage=1.0;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0080_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 26721 27288 . - . ID=LTnewLM_330005900.1;Parent=LTnewLM_330005900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 26721 27288 . - . ID=LTnewLM_330005900.1:pseudogenic_exon:1;Parent=LTnewLM_330005900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 26721 27288 . - . ID=LTnewLM_330005900.1:pep;Derives_from=LTnewLM_330005900.1;orthologous_to=LmjF.33.0080_mRNA;ortholog_cluster=OG0007628;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 Liftoff gene 27831 30098 . - . ID=LTnewLM_330006000;coverage=1.0;sequence_ID=0.917;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.0090_0 LTnewLM_33 Liftoff mRNA 27831 30098 . - . ID=LTnewLM_330006000.1;Parent=LTnewLM_330006000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 27831 30098 . - 0 ID=LTnewLM_330006000.1:CDS:1;Parent=LTnewLM_330006000.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 27831 30098 . - . ID=LTnewLM_330006000.1:pep;Derives_from=LTnewLM_330006000.1;orthologous_to=LmjF.33.0090_mRNA;ortholog_cluster=OG0005013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 30888 31928 1 - . ID=LTnewLM_330006100 LTnewLM_33 AUGUSTUS mRNA 30888 31928 1 - . ID=LTnewLM_330006100.1;Parent=LTnewLM_330006100 LTnewLM_33 AUGUSTUS CDS 30888 31928 1 - 0 ID=LTnewLM_330006100.1:CDS:1;Parent=LTnewLM_330006100.1 ### LTnewLM_33 . polypeptide 30888 31928 . - . ID=LTnewLM_330006100.1:pep;Derives_from=LTnewLM_330006100.1;orthologous_to=LmjF.33.0100_mRNA;ortholog_cluster=OG0005014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 34538 35596 1 - . ID=LTnewLM_330006200 LTnewLM_33 AUGUSTUS mRNA 34538 35596 1 - . ID=LTnewLM_330006200.1;Parent=LTnewLM_330006200 LTnewLM_33 AUGUSTUS CDS 34538 35596 1 - 0 ID=LTnewLM_330006200.1:CDS:1;Parent=LTnewLM_330006200.1 ### LTnewLM_33 . polypeptide 34538 35596 . - . ID=LTnewLM_330006200.1:pep;Derives_from=LTnewLM_330006200.1;orthologous_to=LmjF.33.0110_mRNA;ortholog_cluster=OG0005015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 36251 37162 1 - . ID=LTnewLM_330006300 LTnewLM_33 AUGUSTUS mRNA 36251 37162 1 - . ID=LTnewLM_330006300.1;Parent=LTnewLM_330006300 LTnewLM_33 AUGUSTUS CDS 36251 37162 1 - 0 ID=LTnewLM_330006300.1:CDS:1;Parent=LTnewLM_330006300.1 ### LTnewLM_33 . polypeptide 36251 37162 . - . ID=LTnewLM_330006300.1:pep;Derives_from=LTnewLM_330006300.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 37910 39010 1 - . ID=LTnewLM_330006400 LTnewLM_33 AUGUSTUS mRNA 37910 39010 1 - . ID=LTnewLM_330006400.1;Parent=LTnewLM_330006400 LTnewLM_33 AUGUSTUS CDS 37910 39010 1 - 0 ID=LTnewLM_330006400.1:CDS:1;Parent=LTnewLM_330006400.1 ### LTnewLM_33 . polypeptide 37910 39010 . - . ID=LTnewLM_330006400.1:pep;Derives_from=LTnewLM_330006400.1;orthologous_to=LmjF.33.0120_mRNA;ortholog_cluster=OG0005016;product=term%3DCEP19-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14933 LTnewLM_33 Pfam protein_match 37928 38482 . - . Parent=LTnewLM_330006400.1:pep;Name=PF14933;signature_desc=CEP19-like protein ### LTnewLM_33 AUGUSTUS gene 39607 40632 1 - . ID=LTnewLM_330006500 LTnewLM_33 AUGUSTUS mRNA 39607 40632 1 - . ID=LTnewLM_330006500.1;Parent=LTnewLM_330006500 LTnewLM_33 AUGUSTUS CDS 39607 40632 1 - 0 ID=LTnewLM_330006500.1:CDS:1;Parent=LTnewLM_330006500.1 ### LTnewLM_33 . polypeptide 39607 40632 . - . ID=LTnewLM_330006500.1:pep;Derives_from=LTnewLM_330006500.1;orthologous_to=LmjF.33.0130_mRNA;ortholog_cluster=OG0005017;product=term%3DsnoRNA binding domain%2C fibrillarin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01798 LTnewLM_33 Pfam protein_match 39715 40365 . - . Parent=LTnewLM_330006500.1:pep;Name=PF01798;signature_desc=snoRNA binding domain%2C fibrillarin ### LTnewLM_33 AUGUSTUS gene 41458 42684 1 - . ID=LTnewLM_330006600 LTnewLM_33 AUGUSTUS mRNA 41458 42684 1 - . ID=LTnewLM_330006600.1;Parent=LTnewLM_330006600 LTnewLM_33 AUGUSTUS CDS 41458 42684 1 - 0 ID=LTnewLM_330006600.1:CDS:1;Parent=LTnewLM_330006600.1 ### LTnewLM_33 . polypeptide 41458 42684 . - . ID=LTnewLM_330006600.1:pep;Derives_from=LTnewLM_330006600.1;orthologous_to=LmjF.33.0140_mRNA;ortholog_cluster=OG0005018;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 42223 42300 . - . Parent=LTnewLM_330006600.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 42223 42420 . - . Parent=LTnewLM_330006600.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_33 AUGUSTUS gene 43455 44435 1 - . ID=LTnewLM_330006700 LTnewLM_33 AUGUSTUS mRNA 43455 44435 1 - . ID=LTnewLM_330006700.1;Parent=LTnewLM_330006700 LTnewLM_33 AUGUSTUS CDS 43455 44435 1 - 0 ID=LTnewLM_330006700.1:CDS:1;Parent=LTnewLM_330006700.1 ### LTnewLM_33 . polypeptide 43455 44435 . - . ID=LTnewLM_330006700.1:pep;Derives_from=LTnewLM_330006700.1;orthologous_to=LmjF.33.0150_mRNA;ortholog_cluster=OG0005019;product=term%3DTranscription factor Iwr1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08574 LTnewLM_33 Pfam protein_match 43626 43691 . - . Parent=LTnewLM_330006700.1:pep;Name=PF08574;signature_desc=Transcription factor Iwr1 ### LTnewLM_33 AUGUSTUS gene 46220 47563 1 - . ID=LTnewLM_330006800 LTnewLM_33 AUGUSTUS mRNA 46220 47563 1 - . ID=LTnewLM_330006800.1;Parent=LTnewLM_330006800 LTnewLM_33 AUGUSTUS CDS 46220 47563 1 - 0 ID=LTnewLM_330006800.1:CDS:1;Parent=LTnewLM_330006800.1 ### LTnewLM_33 . polypeptide 46220 47563 . - . ID=LTnewLM_330006800.1:pep;Derives_from=LTnewLM_330006800.1;orthologous_to=LmjF.33.0160_mRNA;ortholog_cluster=OG0005020;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 49763 50772 . - . ID=LTnewLM_330006900:pseudogene;coverage=0.997;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0170_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 49763 50772 . - . ID=LTnewLM_330006900.1;Parent=LTnewLM_330006900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 49763 50772 . - . ID=LTnewLM_330006900.1:pseudogenic_exon:1;Parent=LTnewLM_330006900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 49763 50772 . - . ID=LTnewLM_330006900.1:pep;Derives_from=LTnewLM_330006900.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 52297 52777 1 - . ID=LTnewLM_330007000 LTnewLM_33 AUGUSTUS mRNA 52297 52777 1 - . ID=LTnewLM_330007000.1;Parent=LTnewLM_330007000 LTnewLM_33 AUGUSTUS CDS 52297 52502 1 - 2 ID=LTnewLM_330007000.1:CDS:1;Parent=LTnewLM_330007000.1 LTnewLM_33 AUGUSTUS CDS 52720 52777 1 - 0 ID=LTnewLM_330007000.1:CDS:2;Parent=LTnewLM_330007000.1 ### LTnewLM_33 . polypeptide 52297 52777 . - . ID=LTnewLM_330007000.1:pep;Derives_from=LTnewLM_330007000.1;orthologous_to=LmjF.33.0180_mRNA;ortholog_cluster=OG0005021;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 55339 57003 1 - . ID=LTnewLM_330007100 LTnewLM_33 AUGUSTUS mRNA 55339 57003 1 - . ID=LTnewLM_330007100.1;Parent=LTnewLM_330007100 LTnewLM_33 AUGUSTUS CDS 55339 57003 1 - 0 ID=LTnewLM_330007100.1:CDS:1;Parent=LTnewLM_330007100.1 ### LTnewLM_33 . polypeptide 55339 57003 . - . ID=LTnewLM_330007100.1:pep;Derives_from=LTnewLM_330007100.1;orthologous_to=LmjF.33.0190_mRNA;ortholog_cluster=OG0005022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 58643 63679 1 - . ID=LTnewLM_330007200 LTnewLM_33 AUGUSTUS mRNA 58643 63679 1 - . ID=LTnewLM_330007200.1;Parent=LTnewLM_330007200 LTnewLM_33 AUGUSTUS CDS 58643 63679 1 - 0 ID=LTnewLM_330007200.1:CDS:1;Parent=LTnewLM_330007200.1 ### LTnewLM_33 . polypeptide 58643 63679 . - . ID=LTnewLM_330007200.1:pep;Derives_from=LTnewLM_330007200.1;orthologous_to=LmjF.33.0200_mRNA;ortholog_cluster=OG0005023;product=term%3DCytosolic carboxypeptidase N-terminal domain/Zinc carboxypeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18027|Pfam:PF00246;Ontology_term=GO:0006508,GO:0008270,GO:0004181 LTnewLM_33 Pfam protein_match 59522 60262 . - . Parent=LTnewLM_330007200.1:pep;Name=PF00246;signature_desc=Zinc carboxypeptidase;Ontology_term=GO:0004181,GO:0008270,GO:0006508 LTnewLM_33 Pfam protein_match 60806 61015 . - . Parent=LTnewLM_330007200.1:pep;Name=PF18027;signature_desc=Cytosolic carboxypeptidase N-terminal domain ### LTnewLM_33 AUGUSTUS gene 67042 67530 1 - . ID=LTnewLM_330007300 LTnewLM_33 AUGUSTUS mRNA 67042 67530 1 - . ID=LTnewLM_330007300.1;Parent=LTnewLM_330007300 LTnewLM_33 AUGUSTUS CDS 67042 67530 1 - 0 ID=LTnewLM_330007300.1:CDS:1;Parent=LTnewLM_330007300.1 ### LTnewLM_33 . polypeptide 67042 67530 . - . ID=LTnewLM_330007300.1:pep;Derives_from=LTnewLM_330007300.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 69393 72137 1 - . ID=LTnewLM_330007400 LTnewLM_33 AUGUSTUS mRNA 69393 72137 1 - . ID=LTnewLM_330007400.1;Parent=LTnewLM_330007400 LTnewLM_33 AUGUSTUS CDS 69393 72137 1 - 0 ID=LTnewLM_330007400.1:CDS:1;Parent=LTnewLM_330007400.1 ### LTnewLM_33 . polypeptide 69393 72137 . - . ID=LTnewLM_330007400.1:pep;Derives_from=LTnewLM_330007400.1;orthologous_to=LmjF.33.0210_mRNA;ortholog_cluster=OG0005024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 73958 74569 1 - . ID=LTnewLM_330007500 LTnewLM_33 AUGUSTUS mRNA 73958 74569 1 - . ID=LTnewLM_330007500.1;Parent=LTnewLM_330007500 LTnewLM_33 AUGUSTUS CDS 73958 74569 1 - 0 ID=LTnewLM_330007500.1:CDS:1;Parent=LTnewLM_330007500.1 ### LTnewLM_33 . polypeptide 73958 74569 . - . ID=LTnewLM_330007500.1:pep;Derives_from=LTnewLM_330007500.1;orthologous_to=LmjF.33.0220_mRNA;ortholog_cluster=OG0005025;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 76034 77752 1 - . ID=LTnewLM_330007600 LTnewLM_33 AUGUSTUS mRNA 76034 77752 1 - . ID=LTnewLM_330007600.1;Parent=LTnewLM_330007600 LTnewLM_33 AUGUSTUS CDS 76034 77752 1 - 0 ID=LTnewLM_330007600.1:CDS:1;Parent=LTnewLM_330007600.1 ### LTnewLM_33 . polypeptide 76034 77752 . - . ID=LTnewLM_330007600.1:pep;Derives_from=LTnewLM_330007600.1;orthologous_to=LmjF.33.0230_mRNA;ortholog_cluster=OG0005026;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_33 Pfam protein_match 76616 77101 . - . Parent=LTnewLM_330007600.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_33 AUGUSTUS gene 81026 82831 1 - . ID=LTnewLM_330007700 LTnewLM_33 AUGUSTUS mRNA 81026 82831 1 - . ID=LTnewLM_330007700.1;Parent=LTnewLM_330007700 LTnewLM_33 AUGUSTUS CDS 81026 82831 1 - 0 ID=LTnewLM_330007700.1:CDS:1;Parent=LTnewLM_330007700.1 ### LTnewLM_33 . polypeptide 81026 82831 . - . ID=LTnewLM_330007700.1:pep;Derives_from=LTnewLM_330007700.1;orthologous_to=LmjF.33.0235_mRNA;ortholog_cluster=OG0005027;product=term%3DAdenosine-deaminase (editase) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02137;Ontology_term=GO:0004000,GO:0006396,GO:0003723 LTnewLM_33 Pfam protein_match 81770 82474 . - . Parent=LTnewLM_330007700.1:pep;Name=PF02137;signature_desc=Adenosine-deaminase (editase) domain;Ontology_term=GO:0003723,GO:0004000,GO:0006396 ### LTnewLM_33 AUGUSTUS gene 84582 85934 1 - . ID=LTnewLM_330007800 LTnewLM_33 AUGUSTUS mRNA 84582 85934 1 - . ID=LTnewLM_330007800.1;Parent=LTnewLM_330007800 LTnewLM_33 AUGUSTUS CDS 84582 85934 1 - 0 ID=LTnewLM_330007800.1:CDS:1;Parent=LTnewLM_330007800.1 ### LTnewLM_33 . polypeptide 84582 85934 . - . ID=LTnewLM_330007800.1:pep;Derives_from=LTnewLM_330007800.1;orthologous_to=LmjF.33.0240_mRNA;ortholog_cluster=OG0005028;product=term%3DGlutathione S-transferase%2C N-terminal domain/Glutaredoxin/Glutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02798|Pfam:PF00462|Pfam:PF13417|Pfam:PF13409|Pfam:PF16865|Pfam:PF13410;Ontology_term=GO:0045454,GO:0005515,GO:0015035,GO:0009055 LTnewLM_33 Pfam protein_match 84654 84974 . - . Parent=LTnewLM_330007800.1:pep;Name=PF16865;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 85032 85220 . - . Parent=LTnewLM_330007800.1:pep;Name=PF13409;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85032 85235 . - . Parent=LTnewLM_330007800.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85032 85235 . - . Parent=LTnewLM_330007800.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85326 85646 . - . Parent=LTnewLM_330007800.1:pep;Name=PF16865;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 85368 85538 . - . Parent=LTnewLM_330007800.1:pep;Name=PF13410;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 85698 85895 . - . Parent=LTnewLM_330007800.1:pep;Name=PF13409;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85698 85913 . - . Parent=LTnewLM_330007800.1:pep;Name=PF13417;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85698 85919 . - . Parent=LTnewLM_330007800.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 85755 85916 . - . Parent=LTnewLM_330007800.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 ### LTnewLM_33 AUGUSTUS gene 86631 87647 1 - . ID=LTnewLM_330007900 LTnewLM_33 AUGUSTUS mRNA 86631 87647 1 - . ID=LTnewLM_330007900.1;Parent=LTnewLM_330007900 LTnewLM_33 AUGUSTUS CDS 86631 87647 1 - 0 ID=LTnewLM_330007900.1:CDS:1;Parent=LTnewLM_330007900.1 ### LTnewLM_33 . polypeptide 86631 87647 . - . ID=LTnewLM_330007900.1:pep;Derives_from=LTnewLM_330007900.1;orthologous_to=LmjF.33.0250_mRNA;ortholog_cluster=OG0005029;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 89176 90231 1 - . ID=LTnewLM_330008000 LTnewLM_33 AUGUSTUS mRNA 89176 90231 1 - . ID=LTnewLM_330008000.1;Parent=LTnewLM_330008000 LTnewLM_33 AUGUSTUS CDS 89176 90231 1 - 0 ID=LTnewLM_330008000.1:CDS:1;Parent=LTnewLM_330008000.1 ### LTnewLM_33 . polypeptide 89176 90231 . - . ID=LTnewLM_330008000.1:pep;Derives_from=LTnewLM_330008000.1;orthologous_to=LmjF.33.0260_mRNA;ortholog_cluster=OG0005030;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_33 Pfam protein_match 89347 89526 . - . Parent=LTnewLM_330008000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_33 AUGUSTUS gene 93920 94987 1 - . ID=LTnewLM_330008100 LTnewLM_33 AUGUSTUS mRNA 93920 94987 1 - . ID=LTnewLM_330008100.1;Parent=LTnewLM_330008100 LTnewLM_33 AUGUSTUS CDS 93920 94987 1 - 0 ID=LTnewLM_330008100.1:CDS:1;Parent=LTnewLM_330008100.1 ### LTnewLM_33 . polypeptide 93920 94987 . - . ID=LTnewLM_330008100.1:pep;Derives_from=LTnewLM_330008100.1;orthologous_to=LmjF.33.0270_mRNA;ortholog_cluster=OG0005031;product=term%3DMpv17 / PMP22 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04117;Ontology_term=GO:0016021 LTnewLM_33 Pfam protein_match 93995 94150 . - . Parent=LTnewLM_330008100.1:pep;Name=PF04117;signature_desc=Mpv17 / PMP22 family;Ontology_term=GO:0016021 ### LTnewLM_33 AUGUSTUS gene 96141 97784 1 - . ID=LTnewLM_330008200 LTnewLM_33 AUGUSTUS mRNA 96141 97784 1 - . ID=LTnewLM_330008200.1;Parent=LTnewLM_330008200 LTnewLM_33 AUGUSTUS CDS 96141 97784 1 - 0 ID=LTnewLM_330008200.1:CDS:1;Parent=LTnewLM_330008200.1 ### LTnewLM_33 . polypeptide 96141 97784 . - . ID=LTnewLM_330008200.1:pep;Derives_from=LTnewLM_330008200.1;orthologous_to=LmjF.33.0280_mRNA;ortholog_cluster=OG0005032;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 96459 96551 . - . Parent=LTnewLM_330008200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 . polypeptide 106349 108229 . - . ID=LTnewLM_330008300.1:pep;Derives_from=LTnewLM_330008300.1;orthologous_to=LmjF.33.0290_mRNA;ortholog_cluster=OG0005033;product=term%3DSugar (and other) transporter/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083|Pfam:PF07690;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_33 Pfam protein_match 106418 107905 . - . Parent=LTnewLM_330008300.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_33 Pfam protein_match 106589 107611 . - . Parent=LTnewLM_330008300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_33 Liftoff gene 106349 108313 . - . ID=LTnewLM_330008300;coverage=1.0;sequence_ID=0.943;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.0290_0 LTnewLM_33 Liftoff mRNA 106349 108313 . - . ID=LTnewLM_330008300.1;Parent=LTnewLM_330008300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 106349 108229 . - 0 ID=LTnewLM_330008300.1:CDS:1;Parent=LTnewLM_330008300.1;extra_copy_number=0 LTnewLM_33 Liftoff five_prime_UTR 108230 108313 . - . ID=LTnewLM_330008300:five_prime_UTR;Parent=LTnewLM_330008300.1;extra_copy_number=0 ### LTnewLM_33 AUGUSTUS gene 115454 116281 1 - . ID=LTnewLM_330008400 LTnewLM_33 AUGUSTUS mRNA 115454 116281 1 - . ID=LTnewLM_330008400.1;Parent=LTnewLM_330008400 LTnewLM_33 AUGUSTUS CDS 115454 116281 1 - 0 ID=LTnewLM_330008400.1:CDS:1;Parent=LTnewLM_330008400.1 ### LTnewLM_33 . polypeptide 115454 116281 . - . ID=LTnewLM_330008400.1:pep;Derives_from=LTnewLM_330008400.1;orthologous_to=LmjF.33.0295_mRNA;ortholog_cluster=OG0005034;product=term%3DAutophagocytosis associated protein%2C active-site domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03987 LTnewLM_33 Pfam protein_match 115484 116173 . - . Parent=LTnewLM_330008400.1:pep;Name=PF03987;signature_desc=Autophagocytosis associated protein%2C active-site domain ### LTnewLM_33 Aragorn_1.2.36 gene 117397 117470 . - . ID=LTnewLM_330008500 LTnewLM_33 Aragorn_1.2.36 tRNA 117397 117470 . - . ID=LTnewLM_330008500:tRNA;Parent=LTnewLM_330008500;aa=Arg;anticodon=cct;gc_content=55.4 ### LTnewLM_33 Aragorn_1.2.36 gene 117529 117602 . - . ID=LTnewLM_330008600 LTnewLM_33 Aragorn_1.2.36 tRNA 117529 117602 . - . ID=LTnewLM_330008600:tRNA;Parent=LTnewLM_330008600;aa=Arg;anticodon=tct;gc_content=52.7 ### LTnewLM_33 Aragorn_1.2.36 gene 117677 117750 . + . ID=LTnewLM_330008700 LTnewLM_33 Aragorn_1.2.36 tRNA 117677 117750 . + . ID=LTnewLM_330008700:tRNA;Parent=LTnewLM_330008700;aa=Ala;anticodon=tgc;gc_content=55.4 ### LTnewLM_33 AUGUSTUS gene 118194 119576 1 - . ID=LTnewLM_330008800 LTnewLM_33 AUGUSTUS mRNA 118194 119576 1 - . ID=LTnewLM_330008800.1;Parent=LTnewLM_330008800 LTnewLM_33 AUGUSTUS CDS 118194 119576 1 - 0 ID=LTnewLM_330008800.1:CDS:1;Parent=LTnewLM_330008800.1 ### LTnewLM_33 . polypeptide 118194 119576 . - . ID=LTnewLM_330008800.1:pep;Derives_from=LTnewLM_330008800.1;orthologous_to=LmjF.33.0300_mRNA;ortholog_cluster=OG0005035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 120416 122422 1 - . ID=LTnewLM_330008900 LTnewLM_33 AUGUSTUS mRNA 120416 122422 1 - . ID=LTnewLM_330008900.1;Parent=LTnewLM_330008900 LTnewLM_33 AUGUSTUS CDS 120416 122422 1 - 0 ID=LTnewLM_330008900.1:CDS:1;Parent=LTnewLM_330008900.1 ### LTnewLM_33 . polypeptide 120416 122422 . - . ID=LTnewLM_330008900.1:pep;Derives_from=LTnewLM_330008900.1;orthologous_to=LmjF.33.0310_mRNA;ortholog_cluster=OG0005036;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_33 Pfam protein_match 120830 121216 . - . Parent=LTnewLM_330008900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_33 Pfam protein_match 121688 122170 . - . Parent=LTnewLM_330008900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_33 AUGUSTUS gene 124567 126672 1 - . ID=LTnewLM_330009000 LTnewLM_33 AUGUSTUS mRNA 124567 126672 1 - . ID=LTnewLM_330009000.1;Parent=LTnewLM_330009000 LTnewLM_33 AUGUSTUS CDS 124567 126672 1 - 0 ID=LTnewLM_330009000.1:CDS:1;Parent=LTnewLM_330009000.1 ### LTnewLM_33 . polypeptide 124567 126672 . - . ID=LTnewLM_330009000.1:pep;Derives_from=LTnewLM_330009000.1;orthologous_to=LTnewLM_330009100.1,LTnewLM_330009200.1,LTnewLM_330009300.1,LTnewLM_330009400.1,LTnewLM_330009500.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 124621 126132 . - . Parent=LTnewLM_330009000.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 126142 126600 . - . Parent=LTnewLM_330009000.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 126244 126603 . - . Parent=LTnewLM_330009000.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 128155 130260 1 - . ID=LTnewLM_330009100 LTnewLM_33 AUGUSTUS mRNA 128155 130260 1 - . ID=LTnewLM_330009100.1;Parent=LTnewLM_330009100 LTnewLM_33 AUGUSTUS CDS 128155 130260 1 - 0 ID=LTnewLM_330009100.1:CDS:1;Parent=LTnewLM_330009100.1 ### LTnewLM_33 . polypeptide 128155 130260 . - . ID=LTnewLM_330009100.1:pep;Derives_from=LTnewLM_330009100.1;orthologous_to=LTnewLM_330009000.1,LTnewLM_330009200.1,LTnewLM_330009300.1,LTnewLM_330009400.1,LTnewLM_330009500.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 128209 129720 . - . Parent=LTnewLM_330009100.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 129730 130188 . - . Parent=LTnewLM_330009100.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 129832 130191 . - . Parent=LTnewLM_330009100.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 131742 133849 0.82 - . ID=LTnewLM_330009200 LTnewLM_33 AUGUSTUS mRNA 131742 133849 0.82 - . ID=LTnewLM_330009200.1;Parent=LTnewLM_330009200 LTnewLM_33 AUGUSTUS CDS 131742 131780 0.82 - 0 ID=LTnewLM_330009200.1:CDS:1;Parent=LTnewLM_330009200.1 LTnewLM_33 AUGUSTUS CDS 131825 133849 0.82 - 0 ID=LTnewLM_330009200.1:CDS:2;Parent=LTnewLM_330009200.1 ### LTnewLM_33 . polypeptide 131742 133849 . - . ID=LTnewLM_330009200.1:pep;Derives_from=LTnewLM_330009200.1;orthologous_to=LTnewLM_330009000.1,LTnewLM_330009100.1,LTnewLM_330009300.1,LTnewLM_330009400.1,LTnewLM_330009500.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 131822 133309 . - . Parent=LTnewLM_330009200.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 133319 133777 . - . Parent=LTnewLM_330009200.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 133421 133780 . - . Parent=LTnewLM_330009200.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 135330 137435 1 - . ID=LTnewLM_330009300 LTnewLM_33 AUGUSTUS mRNA 135330 137435 1 - . ID=LTnewLM_330009300.1;Parent=LTnewLM_330009300 LTnewLM_33 AUGUSTUS CDS 135330 137435 1 - 0 ID=LTnewLM_330009300.1:CDS:1;Parent=LTnewLM_330009300.1 ### LTnewLM_33 . polypeptide 135330 137435 . - . ID=LTnewLM_330009300.1:pep;Derives_from=LTnewLM_330009300.1;orthologous_to=LTnewLM_330009000.1,LTnewLM_330009100.1,LTnewLM_330009200.1,LTnewLM_330009400.1,LTnewLM_330009500.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 135384 136895 . - . Parent=LTnewLM_330009300.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 136905 137363 . - . Parent=LTnewLM_330009300.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 137007 137366 . - . Parent=LTnewLM_330009300.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 138918 141023 1 - . ID=LTnewLM_330009400 LTnewLM_33 AUGUSTUS mRNA 138918 141023 1 - . ID=LTnewLM_330009400.1;Parent=LTnewLM_330009400 LTnewLM_33 AUGUSTUS CDS 138918 141023 1 - 0 ID=LTnewLM_330009400.1:CDS:1;Parent=LTnewLM_330009400.1 ### LTnewLM_33 . polypeptide 138918 141023 . - . ID=LTnewLM_330009400.1:pep;Derives_from=LTnewLM_330009400.1;orthologous_to=LTnewLM_330009000.1,LTnewLM_330009100.1,LTnewLM_330009200.1,LTnewLM_330009300.1,LTnewLM_330009500.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 138972 140483 . - . Parent=LTnewLM_330009400.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 140493 140951 . - . Parent=LTnewLM_330009400.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 140595 140954 . - . Parent=LTnewLM_330009400.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 142507 144612 1 - . ID=LTnewLM_330009500 LTnewLM_33 AUGUSTUS mRNA 142507 144612 1 - . ID=LTnewLM_330009500.1;Parent=LTnewLM_330009500 LTnewLM_33 AUGUSTUS CDS 142507 144612 1 - 0 ID=LTnewLM_330009500.1:CDS:1;Parent=LTnewLM_330009500.1 ### LTnewLM_33 . polypeptide 142507 144612 . - . ID=LTnewLM_330009500.1:pep;Derives_from=LTnewLM_330009500.1;orthologous_to=LTnewLM_330009000.1,LTnewLM_330009100.1,LTnewLM_330009200.1,LTnewLM_330009300.1,LTnewLM_330009400.1,LmjF.33.0312_mRNA,LmjF.33.0314_mRNA,LmjF.33.0316_mRNA,LmjF.33.0318_mRNA,LmjF.33.0320_mRNA,LmjF.33.0323_mRNA,LmjF.33.0326_mRNA,LmjF.33.0330_mRNA,LmjF.33.0333_mRNA,LmjF.33.0336_mRNA,LmjF.33.0340_mRNA,LmjF.33.0343_mRNA,LmjF.33.0346_mRNA,LmjF.33.0350_mRNA,LmjF.33.0355_mRNA,LmjF.33.0360_mRNA,LmjF.33.0365_mRNA;ortholog_cluster=OG0000002;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF02518|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 142561 144072 . - . Parent=LTnewLM_330009500.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 LTnewLM_33 Pfam protein_match 144082 144540 . - . Parent=LTnewLM_330009500.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 144184 144543 . - . Parent=LTnewLM_330009500.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_33 AUGUSTUS gene 145678 147864 1 - . ID=LTnewLM_330009600 LTnewLM_33 AUGUSTUS mRNA 145678 147864 1 - . ID=LTnewLM_330009600.1;Parent=LTnewLM_330009600 LTnewLM_33 AUGUSTUS CDS 145678 147864 1 - 0 ID=LTnewLM_330009600.1:CDS:1;Parent=LTnewLM_330009600.1 ### LTnewLM_33 . polypeptide 145678 147864 . - . ID=LTnewLM_330009600.1:pep;Derives_from=LTnewLM_330009600.1;orthologous_to=LmjF.33.0370_mRNA;ortholog_cluster=OG0005037;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 146269 146376 . - . Parent=LTnewLM_330009600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 149843 151156 1 - . ID=LTnewLM_330009700 LTnewLM_33 AUGUSTUS mRNA 149843 151156 1 - . ID=LTnewLM_330009700.1;Parent=LTnewLM_330009700 LTnewLM_33 AUGUSTUS CDS 149843 151156 1 - 0 ID=LTnewLM_330009700.1:CDS:1;Parent=LTnewLM_330009700.1 ### LTnewLM_33 . polypeptide 149843 151156 . - . ID=LTnewLM_330009700.1:pep;Derives_from=LTnewLM_330009700.1;orthologous_to=LmjF.33.0380_mRNA;ortholog_cluster=OG0005038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 152628 153765 . - . ID=LTnewLM_330009800:pseudogene;coverage=0.985;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0390_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 152628 153765 . - . ID=LTnewLM_330009800.1;Parent=LTnewLM_330009800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 152628 153765 . - . ID=LTnewLM_330009800.1:pseudogenic_exon:1;Parent=LTnewLM_330009800.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 152628 153765 . - . ID=LTnewLM_330009800.1:pep;Derives_from=LTnewLM_330009800.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 154674 155894 1 - . ID=LTnewLM_330009900 LTnewLM_33 AUGUSTUS mRNA 154674 155894 1 - . ID=LTnewLM_330009900.1;Parent=LTnewLM_330009900 LTnewLM_33 AUGUSTUS CDS 154674 155894 1 - 0 ID=LTnewLM_330009900.1:CDS:1;Parent=LTnewLM_330009900.1 ### LTnewLM_33 . polypeptide 154674 155894 . - . ID=LTnewLM_330009900.1:pep;Derives_from=LTnewLM_330009900.1;orthologous_to=LmjF.33.0400_mRNA;ortholog_cluster=OG0005039;product=term%3DSerine aminopeptidase%2C S33/alpha/beta hydrolase fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12146|Pfam:PF00561 LTnewLM_33 Pfam protein_match 155361 155690 . - . Parent=LTnewLM_330009900.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_33 Pfam protein_match 155361 155690 . - . Parent=LTnewLM_330009900.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold ### LTnewLM_33 AUGUSTUS gene 157467 160286 1 - . ID=LTnewLM_330010000 LTnewLM_33 AUGUSTUS mRNA 157467 160286 1 - . ID=LTnewLM_330010000.1;Parent=LTnewLM_330010000 LTnewLM_33 AUGUSTUS CDS 157467 160286 1 - 0 ID=LTnewLM_330010000.1:CDS:1;Parent=LTnewLM_330010000.1 ### LTnewLM_33 . polypeptide 157467 160286 . - . ID=LTnewLM_330010000.1:pep;Derives_from=LTnewLM_330010000.1;orthologous_to=LmjF.33.0410_mRNA;ortholog_cluster=OG0005040;product=term%3DMutS domain III/MutS family domain IV/MutS domain V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05192|Pfam:PF05190|Pfam:PF00488;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_33 Pfam protein_match 157683 158243 . - . Parent=LTnewLM_330010000.1:pep;Name=PF00488;signature_desc=MutS domain V;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_33 Pfam protein_match 158460 159362 . - . Parent=LTnewLM_330010000.1:pep;Name=PF05192;signature_desc=MutS domain III;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_33 Pfam protein_match 158586 158861 . - . Parent=LTnewLM_330010000.1:pep;Name=PF05190;signature_desc=MutS family domain IV;Ontology_term=GO:0005524,GO:0030983,GO:0006298 ### LTnewLM_33 AUGUSTUS gene 162432 163127 1 - . ID=LTnewLM_330010100 LTnewLM_33 AUGUSTUS mRNA 162432 163127 1 - . ID=LTnewLM_330010100.1;Parent=LTnewLM_330010100 LTnewLM_33 AUGUSTUS CDS 162432 163127 1 - 0 ID=LTnewLM_330010100.1:CDS:1;Parent=LTnewLM_330010100.1 ### LTnewLM_33 . polypeptide 162432 163127 . - . ID=LTnewLM_330010100.1:pep;Derives_from=LTnewLM_330010100.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 166115 166414 1 - . ID=LTnewLM_330010200 LTnewLM_33 AUGUSTUS mRNA 166115 166414 1 - . ID=LTnewLM_330010200.1;Parent=LTnewLM_330010200 LTnewLM_33 AUGUSTUS CDS 166115 166414 1 - 0 ID=LTnewLM_330010200.1:CDS:1;Parent=LTnewLM_330010200.1 ### LTnewLM_33 . polypeptide 166115 166414 . - . ID=LTnewLM_330010200.1:pep;Derives_from=LTnewLM_330010200.1;orthologous_to=LmjF.33.0420_mRNA;ortholog_cluster=OG0005041;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 167244 170384 1 - . ID=LTnewLM_330010300 LTnewLM_33 AUGUSTUS mRNA 167244 170384 1 - . ID=LTnewLM_330010300.1;Parent=LTnewLM_330010300 LTnewLM_33 AUGUSTUS CDS 167244 170384 1 - 0 ID=LTnewLM_330010300.1:CDS:1;Parent=LTnewLM_330010300.1 ### LTnewLM_33 . polypeptide 167244 170384 . - . ID=LTnewLM_330010300.1:pep;Derives_from=LTnewLM_330010300.1;orthologous_to=LmjF.33.0430_mRNA;ortholog_cluster=OG0005042;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 171030 171950 . - . ID=LTnewLM_330010400:pseudogene;coverage=1.0;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0440_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 171030 171950 . - . ID=LTnewLM_330010400.1;Parent=LTnewLM_330010400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 171030 171950 . - . ID=LTnewLM_330010400.1:pseudogenic_exon:1;Parent=LTnewLM_330010400.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 171030 171950 . - . ID=LTnewLM_330010400.1:pep;Derives_from=LTnewLM_330010400.1;orthologous_to=LmjF.33.0440_mRNA;ortholog_cluster=OG0007629;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 172568 173218 1 - . ID=LTnewLM_330010500 LTnewLM_33 AUGUSTUS mRNA 172568 173218 1 - . ID=LTnewLM_330010500.1;Parent=LTnewLM_330010500 LTnewLM_33 AUGUSTUS CDS 172568 173218 1 - 0 ID=LTnewLM_330010500.1:CDS:1;Parent=LTnewLM_330010500.1 ### LTnewLM_33 . polypeptide 172568 173218 . - . ID=LTnewLM_330010500.1:pep;Derives_from=LTnewLM_330010500.1;orthologous_to=LmjF.33.0450_mRNA;ortholog_cluster=OG0005043;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 174391 175257 1 - . ID=LTnewLM_330010600 LTnewLM_33 AUGUSTUS mRNA 174391 175257 1 - . ID=LTnewLM_330010600.1;Parent=LTnewLM_330010600 LTnewLM_33 AUGUSTUS CDS 174391 175257 1 - 0 ID=LTnewLM_330010600.1:CDS:1;Parent=LTnewLM_330010600.1 ### LTnewLM_33 . polypeptide 174391 175257 . - . ID=LTnewLM_330010600.1:pep;Derives_from=LTnewLM_330010600.1;orthologous_to=LmjF.33.0460_mRNA;ortholog_cluster=OG0005044;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 177241 178866 1 - . ID=LTnewLM_330010700 LTnewLM_33 AUGUSTUS mRNA 177241 178866 1 - . ID=LTnewLM_330010700.1;Parent=LTnewLM_330010700 LTnewLM_33 AUGUSTUS CDS 177241 178866 1 - 0 ID=LTnewLM_330010700.1:CDS:1;Parent=LTnewLM_330010700.1 ### LTnewLM_33 . polypeptide 177241 178866 . - . ID=LTnewLM_330010700.1:pep;Derives_from=LTnewLM_330010700.1;orthologous_to=LmjF.33.0470_mRNA;ortholog_cluster=OG0005045;product=term%3DDNA photolyase/FAD binding domain of DNA photolyase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00875|Pfam:PF03441;Ontology_term=GO:0003913,GO:0006281 LTnewLM_33 Pfam protein_match 177271 177969 . - . Parent=LTnewLM_330010700.1:pep;Name=PF03441;signature_desc=FAD binding domain of DNA photolyase;Ontology_term=GO:0003913,GO:0006281 LTnewLM_33 Pfam protein_match 178282 178782 . - . Parent=LTnewLM_330010700.1:pep;Name=PF00875;signature_desc=DNA photolyase ### LTnewLM_33 Liftoff gene 179908 181992 . - . ID=LTnewLM_330010800;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0480_0 LTnewLM_33 Liftoff mRNA 179908 181992 . - . ID=LTnewLM_330010800.1;Parent=LTnewLM_330010800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 179908 181992 . - 0 ID=LTnewLM_330010800.1:CDS:1;Parent=LTnewLM_330010800.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 179908 181992 . - . ID=LTnewLM_330010800.1:pep;Derives_from=LTnewLM_330010800.1;orthologous_to=LmjF.33.0480_mRNA;ortholog_cluster=OG0005046;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 182728 185970 0.94 - . ID=LTnewLM_330010900 LTnewLM_33 AUGUSTUS mRNA 182728 185970 0.94 - . ID=LTnewLM_330010900.1;Parent=LTnewLM_330010900 LTnewLM_33 AUGUSTUS CDS 182728 185970 0.94 - 0 ID=LTnewLM_330010900.1:CDS:1;Parent=LTnewLM_330010900.1 ### LTnewLM_33 . polypeptide 182728 185970 . - . ID=LTnewLM_330010900.1:pep;Derives_from=LTnewLM_330010900.1;orthologous_to=LmjF.33.0490_mRNA;ortholog_cluster=OG0005047;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 186442 187362 1 - . ID=LTnewLM_330011000 LTnewLM_33 AUGUSTUS mRNA 186442 187362 1 - . ID=LTnewLM_330011000.1;Parent=LTnewLM_330011000 LTnewLM_33 AUGUSTUS CDS 186442 187362 1 - 0 ID=LTnewLM_330011000.1:CDS:1;Parent=LTnewLM_330011000.1 ### LTnewLM_33 . polypeptide 186442 187362 . - . ID=LTnewLM_330011000.1:pep;Derives_from=LTnewLM_330011000.1;orthologous_to=LmjF.33.0500_mRNA;ortholog_cluster=OG0005048;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 188113 191127 1 - . ID=LTnewLM_330011100 LTnewLM_33 AUGUSTUS mRNA 188113 191127 1 - . ID=LTnewLM_330011100.1;Parent=LTnewLM_330011100 LTnewLM_33 AUGUSTUS CDS 188113 191127 1 - 0 ID=LTnewLM_330011100.1:CDS:1;Parent=LTnewLM_330011100.1 ### LTnewLM_33 . polypeptide 188113 191127 . - . ID=LTnewLM_330011100.1:pep;Derives_from=LTnewLM_330011100.1;orthologous_to=LmjF.33.0510_mRNA;ortholog_cluster=OG0005049;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 189091 189309 . - . Parent=LTnewLM_330011100.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 193271 194320 1 - . ID=LTnewLM_330011200 LTnewLM_33 AUGUSTUS mRNA 193271 194320 1 - . ID=LTnewLM_330011200.1;Parent=LTnewLM_330011200 LTnewLM_33 AUGUSTUS CDS 193271 194320 1 - 0 ID=LTnewLM_330011200.1:CDS:1;Parent=LTnewLM_330011200.1 ### LTnewLM_33 . polypeptide 193271 194320 . - . ID=LTnewLM_330011200.1:pep;Derives_from=LTnewLM_330011200.1;orthologous_to=LmjF.33.0520_mRNA;ortholog_cluster=OG0005050;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_33 Pfam protein_match 193403 193783 . - . Parent=LTnewLM_330011200.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_33 Pfam protein_match 193907 194236 . - . Parent=LTnewLM_330011200.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_33 Liftoff gene 194962 199887 . - . ID=LTnewLM_330011300;coverage=0.994;sequence_ID=0.934;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.0530_0 LTnewLM_33 Liftoff mRNA 194962 199887 . - . ID=LTnewLM_330011300.1;Parent=LTnewLM_330011300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 194962 199887 . - 0 ID=LTnewLM_330011300.1:CDS:1;Parent=LTnewLM_330011300.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 194962 199887 . - . ID=LTnewLM_330011300.1:pep;Derives_from=LTnewLM_330011300.1;orthologous_to=LmjF.33.0530_mRNA;ortholog_cluster=OG0005051;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 201243 201851 1 - . ID=LTnewLM_330011400 LTnewLM_33 AUGUSTUS mRNA 201243 201851 1 - . ID=LTnewLM_330011400.1;Parent=LTnewLM_330011400 LTnewLM_33 AUGUSTUS CDS 201243 201851 1 - 0 ID=LTnewLM_330011400.1:CDS:1;Parent=LTnewLM_330011400.1 ### LTnewLM_33 . polypeptide 201243 201851 . - . ID=LTnewLM_330011400.1:pep;Derives_from=LTnewLM_330011400.1;orthologous_to=LmjF.33.0535_mRNA;ortholog_cluster=OG0005052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 204227 205573 1 - . ID=LTnewLM_330011500 LTnewLM_33 AUGUSTUS mRNA 204227 205573 1 - . ID=LTnewLM_330011500.1;Parent=LTnewLM_330011500 LTnewLM_33 AUGUSTUS CDS 204227 205573 1 - 0 ID=LTnewLM_330011500.1:CDS:1;Parent=LTnewLM_330011500.1 ### LTnewLM_33 . polypeptide 204227 205573 . - . ID=LTnewLM_330011500.1:pep;Derives_from=LTnewLM_330011500.1;orthologous_to=LmjF.33.0540_mRNA;ortholog_cluster=OG0005053;product=term%3DScaffold protein Nfu/NifU N terminal/NifU-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08712|Pfam:PF01106;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_33 Pfam protein_match 204515 204715 . - . Parent=LTnewLM_330011500.1:pep;Name=PF01106;signature_desc=NifU-like domain;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_33 Pfam protein_match 205157 205360 . - . Parent=LTnewLM_330011500.1:pep;Name=PF08712;signature_desc=Scaffold protein Nfu/NifU N terminal ### LTnewLM_33 AUGUSTUS gene 206568 212921 1 - . ID=LTnewLM_330011600 LTnewLM_33 AUGUSTUS mRNA 206568 212921 1 - . ID=LTnewLM_330011600.1;Parent=LTnewLM_330011600 LTnewLM_33 AUGUSTUS CDS 206568 212921 1 - 0 ID=LTnewLM_330011600.1:CDS:1;Parent=LTnewLM_330011600.1 ### LTnewLM_33 . polypeptide 206568 212921 . - . ID=LTnewLM_330011600.1:pep;Derives_from=LTnewLM_330011600.1;orthologous_to=LmjF.33.0550_mRNA;ortholog_cluster=OG0005054;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 215089 216459 1 - . ID=LTnewLM_330011700 LTnewLM_33 AUGUSTUS mRNA 215089 216459 1 - . ID=LTnewLM_330011700.1;Parent=LTnewLM_330011700 LTnewLM_33 AUGUSTUS CDS 215089 216459 1 - 0 ID=LTnewLM_330011700.1:CDS:1;Parent=LTnewLM_330011700.1 ### LTnewLM_33 . polypeptide 215089 216459 . - . ID=LTnewLM_330011700.1:pep;Derives_from=LTnewLM_330011700.1;orthologous_to=LmjF.33.0560_mRNA;ortholog_cluster=OG0005055;product=term%3DtRNA-splicing ligase RtcB%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01139;Ontology_term=GO:0006396,GO:0008452 LTnewLM_33 Pfam protein_match 215095 216270 . - . Parent=LTnewLM_330011700.1:pep;Name=PF01139;signature_desc=tRNA-splicing ligase RtcB;Ontology_term=GO:0008452,GO:0006396 ### LTnewLM_33 AUGUSTUS gene 218447 218881 1 - . ID=LTnewLM_330011800 LTnewLM_33 AUGUSTUS mRNA 218447 218881 1 - . ID=LTnewLM_330011800.1;Parent=LTnewLM_330011800 LTnewLM_33 AUGUSTUS CDS 218447 218881 1 - 0 ID=LTnewLM_330011800.1:CDS:1;Parent=LTnewLM_330011800.1 ### LTnewLM_33 . polypeptide 218447 218881 . - . ID=LTnewLM_330011800.1:pep;Derives_from=LTnewLM_330011800.1;orthologous_to=LmjF.33.0565_mRNA;ortholog_cluster=OG0005056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 220732 222471 1 - . ID=LTnewLM_330011900 LTnewLM_33 AUGUSTUS mRNA 220732 222471 1 - . ID=LTnewLM_330011900.1;Parent=LTnewLM_330011900 LTnewLM_33 AUGUSTUS CDS 220732 222471 1 - 0 ID=LTnewLM_330011900.1:CDS:1;Parent=LTnewLM_330011900.1 ### LTnewLM_33 . polypeptide 220732 222471 . - . ID=LTnewLM_330011900.1:pep;Derives_from=LTnewLM_330011900.1;orthologous_to=LmjF.33.0570_mRNA;ortholog_cluster=OG0005057;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 223384 224592 1 - . ID=LTnewLM_330012000 LTnewLM_33 AUGUSTUS mRNA 223384 224592 1 - . ID=LTnewLM_330012000.1;Parent=LTnewLM_330012000 LTnewLM_33 AUGUSTUS CDS 223384 224592 1 - 0 ID=LTnewLM_330012000.1:CDS:1;Parent=LTnewLM_330012000.1 ### LTnewLM_33 . polypeptide 223384 224592 . - . ID=LTnewLM_330012000.1:pep;Derives_from=LTnewLM_330012000.1;orthologous_to=LmjF.33.0580_mRNA;ortholog_cluster=OG0005058;product=term%3DNF-kappa-B-activating protein C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06047 LTnewLM_33 Pfam protein_match 223405 223656 . - . Parent=LTnewLM_330012000.1:pep;Name=PF06047;signature_desc=NF-kappa-B-activating protein C-terminal domain ### LTnewLM_33 AUGUSTUS gene 225540 227573 1 - . ID=LTnewLM_330012100 LTnewLM_33 AUGUSTUS mRNA 225540 227573 1 - . ID=LTnewLM_330012100.1;Parent=LTnewLM_330012100 LTnewLM_33 AUGUSTUS CDS 225540 227573 1 - 0 ID=LTnewLM_330012100.1:CDS:1;Parent=LTnewLM_330012100.1 ### LTnewLM_33 . polypeptide 225540 227573 . - . ID=LTnewLM_330012100.1:pep;Derives_from=LTnewLM_330012100.1;orthologous_to=LmjF.33.0585_mRNA;ortholog_cluster=OG0005059;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 228946 231573 1 - . ID=LTnewLM_330012200 LTnewLM_33 AUGUSTUS mRNA 228946 231573 1 - . ID=LTnewLM_330012200.1;Parent=LTnewLM_330012200 LTnewLM_33 AUGUSTUS CDS 228946 231573 1 - 0 ID=LTnewLM_330012200.1:CDS:1;Parent=LTnewLM_330012200.1 ### LTnewLM_33 . polypeptide 228946 231573 . - . ID=LTnewLM_330012200.1:pep;Derives_from=LTnewLM_330012200.1;orthologous_to=LmjF.33.0590_mRNA;ortholog_cluster=OG0005060;product=term%3DBRE1 E3 ubiquitin ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08647 LTnewLM_33 Pfam protein_match 229720 230013 . - . Parent=LTnewLM_330012200.1:pep;Name=PF08647;signature_desc=BRE1 E3 ubiquitin ligase ### LTnewLM_33 AUGUSTUS gene 232063 232635 1 - . ID=LTnewLM_330012300 LTnewLM_33 AUGUSTUS mRNA 232063 232635 1 - . ID=LTnewLM_330012300.1;Parent=LTnewLM_330012300 LTnewLM_33 AUGUSTUS CDS 232063 232635 1 - 0 ID=LTnewLM_330012300.1:CDS:1;Parent=LTnewLM_330012300.1 ### LTnewLM_33 . polypeptide 232063 232635 . - . ID=LTnewLM_330012300.1:pep;Derives_from=LTnewLM_330012300.1;orthologous_to=LmjF.33.0600_mRNA;ortholog_cluster=OG0005061;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 235632 236915 1 + . ID=LTnewLM_330012400 LTnewLM_33 AUGUSTUS mRNA 235632 236915 1 + . ID=LTnewLM_330012400.1;Parent=LTnewLM_330012400 LTnewLM_33 AUGUSTUS CDS 235632 236915 1 + 0 ID=LTnewLM_330012400.1:CDS:1;Parent=LTnewLM_330012400.1 ### LTnewLM_33 . polypeptide 235632 236915 . + . ID=LTnewLM_330012400.1:pep;Derives_from=LTnewLM_330012400.1;orthologous_to=LmjF.33.0605_mRNA;ortholog_cluster=OG0005062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 237336 237716 1 + . ID=LTnewLM_330012500 LTnewLM_33 AUGUSTUS mRNA 237336 237716 1 + . ID=LTnewLM_330012500.1;Parent=LTnewLM_330012500 LTnewLM_33 AUGUSTUS CDS 237336 237716 1 + 0 ID=LTnewLM_330012500.1:CDS:1;Parent=LTnewLM_330012500.1 ### LTnewLM_33 . polypeptide 237336 237716 . + . ID=LTnewLM_330012500.1:pep;Derives_from=LTnewLM_330012500.1;orthologous_to=LmjF.33.0610_mRNA;ortholog_cluster=OG0005063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 238318 239571 1 + . ID=LTnewLM_330012600 LTnewLM_33 AUGUSTUS mRNA 238318 239571 1 + . ID=LTnewLM_330012600.1;Parent=LTnewLM_330012600 LTnewLM_33 AUGUSTUS CDS 238318 239571 1 + 0 ID=LTnewLM_330012600.1:CDS:1;Parent=LTnewLM_330012600.1 ### LTnewLM_33 . polypeptide 238318 239571 . + . ID=LTnewLM_330012600.1:pep;Derives_from=LTnewLM_330012600.1;orthologous_to=LmjF.33.0620_mRNA;ortholog_cluster=OG0005064;product=term%3DIntra-flagellar transport protein 57%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10498 LTnewLM_33 Pfam protein_match 238405 239469 . + . Parent=LTnewLM_330012600.1:pep;Name=PF10498;signature_desc=Intra-flagellar transport protein 57 ### LTnewLM_33 AUGUSTUS gene 240548 242083 1 + . ID=LTnewLM_330012700 LTnewLM_33 AUGUSTUS mRNA 240548 242083 1 + . ID=LTnewLM_330012700.1;Parent=LTnewLM_330012700 LTnewLM_33 AUGUSTUS CDS 240548 242083 1 + 0 ID=LTnewLM_330012700.1:CDS:1;Parent=LTnewLM_330012700.1 ### LTnewLM_33 . polypeptide 240548 242083 . + . ID=LTnewLM_330012700.1:pep;Derives_from=LTnewLM_330012700.1;orthologous_to=LmjF.33.0630_mRNA;ortholog_cluster=OG0005065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 242918 243754 1 + . ID=LTnewLM_330012800 LTnewLM_33 AUGUSTUS mRNA 242918 243754 1 + . ID=LTnewLM_330012800.1;Parent=LTnewLM_330012800 LTnewLM_33 AUGUSTUS CDS 242918 243754 1 + 0 ID=LTnewLM_330012800.1:CDS:1;Parent=LTnewLM_330012800.1 ### LTnewLM_33 . polypeptide 242918 243754 . + . ID=LTnewLM_330012800.1:pep;Derives_from=LTnewLM_330012800.1;orthologous_to=LmjF.33.0640_mRNA;ortholog_cluster=OG0005066;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 245553 249761 1 + . ID=LTnewLM_330012900 LTnewLM_33 AUGUSTUS mRNA 245553 249761 1 + . ID=LTnewLM_330012900.1;Parent=LTnewLM_330012900 LTnewLM_33 AUGUSTUS CDS 245553 249761 1 + 0 ID=LTnewLM_330012900.1:CDS:1;Parent=LTnewLM_330012900.1 ### LTnewLM_33 . polypeptide 245553 249761 . + . ID=LTnewLM_330012900.1:pep;Derives_from=LTnewLM_330012900.1;orthologous_to=LmjF.33.0650_mRNA;ortholog_cluster=OG0005067;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 251461 251919 1 + . ID=LTnewLM_330013000 LTnewLM_33 AUGUSTUS mRNA 251461 251919 1 + . ID=LTnewLM_330013000.1;Parent=LTnewLM_330013000 LTnewLM_33 AUGUSTUS CDS 251461 251919 1 + 0 ID=LTnewLM_330013000.1:CDS:1;Parent=LTnewLM_330013000.1 ### LTnewLM_33 . polypeptide 251461 251919 . + . ID=LTnewLM_330013000.1:pep;Derives_from=LTnewLM_330013000.1;orthologous_to=LmjF.33.0660_mRNA;ortholog_cluster=OG0005068;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 252912 255254 1 + . ID=LTnewLM_330013100 LTnewLM_33 AUGUSTUS mRNA 252912 255254 1 + . ID=LTnewLM_330013100.1;Parent=LTnewLM_330013100 LTnewLM_33 AUGUSTUS CDS 252912 255254 1 + 0 ID=LTnewLM_330013100.1:CDS:1;Parent=LTnewLM_330013100.1 ### LTnewLM_33 . polypeptide 252912 255254 . + . ID=LTnewLM_330013100.1:pep;Derives_from=LTnewLM_330013100.1;orthologous_to=LmjF.33.0670_mRNA;ortholog_cluster=OG0005069;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 256340 257830 1 + . ID=LTnewLM_330013200 LTnewLM_33 AUGUSTUS mRNA 256340 257830 1 + . ID=LTnewLM_330013200.1;Parent=LTnewLM_330013200 LTnewLM_33 AUGUSTUS CDS 256340 257830 1 + 0 ID=LTnewLM_330013200.1:CDS:1;Parent=LTnewLM_330013200.1 ### LTnewLM_33 . polypeptide 256340 257830 . + . ID=LTnewLM_330013200.1:pep;Derives_from=LTnewLM_330013200.1;orthologous_to=LmjF.33.0680_mRNA;ortholog_cluster=OG0005070;product=term%3DErgosterol biosynthesis ERG4/ERG24 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01222;Ontology_term=GO:0016020 LTnewLM_33 Pfam protein_match 256520 257824 . + . Parent=LTnewLM_330013200.1:pep;Name=PF01222;signature_desc=Ergosterol biosynthesis ERG4/ERG24 family;Ontology_term=GO:0016020 ### LTnewLM_33 AUGUSTUS gene 261279 261743 1 + . ID=LTnewLM_330013300 LTnewLM_33 AUGUSTUS mRNA 261279 261743 1 + . ID=LTnewLM_330013300.1;Parent=LTnewLM_330013300 LTnewLM_33 AUGUSTUS CDS 261279 261743 1 + 0 ID=LTnewLM_330013300.1:CDS:1;Parent=LTnewLM_330013300.1 ### LTnewLM_33 . polypeptide 261279 261743 . + . ID=LTnewLM_330013300.1:pep;Derives_from=LTnewLM_330013300.1;orthologous_to=LmjF.33.0690_mRNA;ortholog_cluster=OG0005071;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 262599 263768 1 + . ID=LTnewLM_330013400 LTnewLM_33 AUGUSTUS mRNA 262599 263768 1 + . ID=LTnewLM_330013400.1;Parent=LTnewLM_330013400 LTnewLM_33 AUGUSTUS CDS 262599 263768 1 + 0 ID=LTnewLM_330013400.1:CDS:1;Parent=LTnewLM_330013400.1 ### LTnewLM_33 . polypeptide 262599 263768 . + . ID=LTnewLM_330013400.1:pep;Derives_from=LTnewLM_330013400.1;orthologous_to=LmjF.33.0700_mRNA;ortholog_cluster=OG0005072;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 264673 266562 1 + . ID=LTnewLM_330013500 LTnewLM_33 AUGUSTUS mRNA 264673 266562 1 + . ID=LTnewLM_330013500.1;Parent=LTnewLM_330013500 LTnewLM_33 AUGUSTUS CDS 264673 266562 1 + 0 ID=LTnewLM_330013500.1:CDS:1;Parent=LTnewLM_330013500.1 ### LTnewLM_33 . polypeptide 264673 266562 . + . ID=LTnewLM_330013500.1:pep;Derives_from=LTnewLM_330013500.1;orthologous_to=LmjF.33.0710_mRNA;ortholog_cluster=OG0005073;product=term%3DPOT family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00854;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_33 Pfam protein_match 265339 266469 . + . Parent=LTnewLM_330013500.1:pep;Name=PF00854;signature_desc=POT family;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_33 AUGUSTUS gene 267603 268190 1 + . ID=LTnewLM_330013600 LTnewLM_33 AUGUSTUS mRNA 267603 268190 1 + . ID=LTnewLM_330013600.1;Parent=LTnewLM_330013600 LTnewLM_33 AUGUSTUS CDS 267603 268190 1 + 0 ID=LTnewLM_330013600.1:CDS:1;Parent=LTnewLM_330013600.1 ### LTnewLM_33 . polypeptide 267603 268190 . + . ID=LTnewLM_330013600.1:pep;Derives_from=LTnewLM_330013600.1;orthologous_to=LTnewLM_150017300.1,LmjF.33.0720_mRNA;ortholog_cluster=OG0000341;product=term%3DRibosomal protein L6e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01159;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_33 Pfam protein_match 267813 268184 . + . Parent=LTnewLM_330013600.1:pep;Name=PF01159;signature_desc=Ribosomal protein L6e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_33 AUGUSTUS gene 268917 270464 1 + . ID=LTnewLM_330013700 LTnewLM_33 AUGUSTUS mRNA 268917 270464 1 + . ID=LTnewLM_330013700.1;Parent=LTnewLM_330013700 LTnewLM_33 AUGUSTUS CDS 268917 270464 1 + 0 ID=LTnewLM_330013700.1:CDS:1;Parent=LTnewLM_330013700.1 ### LTnewLM_33 . polypeptide 268917 270464 . + . ID=LTnewLM_330013700.1:pep;Derives_from=LTnewLM_330013700.1;orthologous_to=LmjF.33.0730_mRNA;ortholog_cluster=OG0005074;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 269172 269267 . + . Parent=LTnewLM_330013700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 269496 269594 . + . Parent=LTnewLM_330013700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 269670 269759 . + . Parent=LTnewLM_330013700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 . pseudogene 271272 272401 . + . ID=LTnewLM_330013800:pseudogene;coverage=0.999;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0740_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 271272 272401 . + . ID=LTnewLM_330013800.1;Parent=LTnewLM_330013800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 271272 272401 . + . ID=LTnewLM_330013800.1:pseudogenic_exon:1;Parent=LTnewLM_330013800.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 271272 272401 . + . ID=LTnewLM_330013800.1:pep;Derives_from=LTnewLM_330013800.1;product=term%3Dhypothetical protein ### LTnewLM_33 Liftoff gene 273481 275991 . + . ID=LTnewLM_330013900;coverage=0.998;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.0750_0 LTnewLM_33 Liftoff mRNA 273481 275991 . + . ID=LTnewLM_330013900.1;Parent=LTnewLM_330013900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 273481 275991 . + 0 ID=LTnewLM_330013900.1:CDS:1;Parent=LTnewLM_330013900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 273481 275991 . + . ID=LTnewLM_330013900.1:pep;Derives_from=LTnewLM_330013900.1;orthologous_to=LmjF.33.0750_mRNA;ortholog_cluster=OG0005075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 279744 280934 1 + . ID=LTnewLM_330014000 LTnewLM_33 AUGUSTUS mRNA 279744 280934 1 + . ID=LTnewLM_330014000.1;Parent=LTnewLM_330014000 LTnewLM_33 AUGUSTUS CDS 279744 280934 1 + 0 ID=LTnewLM_330014000.1:CDS:1;Parent=LTnewLM_330014000.1 ### LTnewLM_33 . polypeptide 279744 280934 . + . ID=LTnewLM_330014000.1:pep;Derives_from=LTnewLM_330014000.1;orthologous_to=LmjF.33.0760_mRNA;ortholog_cluster=OG0005076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 282356 283618 1 + . ID=LTnewLM_330014100 LTnewLM_33 AUGUSTUS mRNA 282356 283618 1 + . ID=LTnewLM_330014100.1;Parent=LTnewLM_330014100 LTnewLM_33 AUGUSTUS CDS 282356 283618 1 + 0 ID=LTnewLM_330014100.1:CDS:1;Parent=LTnewLM_330014100.1 ### LTnewLM_33 . polypeptide 282356 283618 . + . ID=LTnewLM_330014100.1:pep;Derives_from=LTnewLM_330014100.1;orthologous_to=LmjF.33.0765_mRNA;ortholog_cluster=OG0005077;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 290111 291059 . + . ID=LTnewLM_330014200.1:pep;Derives_from=LTnewLM_330014200.1;orthologous_to=LTnewLM_330014200.2,LmjF.33.0770_mRNA;ortholog_cluster=OG0000450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 290111 293461 1.82 + . ID=LTnewLM_330014200 LTnewLM_33 AUGUSTUS mRNA 290111 291059 0.82 + . ID=LTnewLM_330014200.1;Parent=LTnewLM_330014200 LTnewLM_33 AUGUSTUS CDS 290111 290987 0.83 + 0 ID=LTnewLM_330014200.1:CDS:1;Parent=LTnewLM_330014200.1 LTnewLM_33 AUGUSTUS CDS 291031 291059 0.82 + 2 ID=LTnewLM_330014200.1:CDS:2;Parent=LTnewLM_330014200.1 LTnewLM_33 AUGUSTUS mRNA 290111 293461 1 + . ID=LTnewLM_330014200.2;Parent=LTnewLM_330014200 LTnewLM_33 AUGUSTUS CDS 290111 293461 1 + 0 ID=LTnewLM_330014200.2:CDS:1;Parent=LTnewLM_330014200.2 ### LTnewLM_33 . polypeptide 290111 293461 . + . ID=LTnewLM_330014200.2:pep;Derives_from=LTnewLM_330014200.2;orthologous_to=LTnewLM_330014200.1,LmjF.33.0770_mRNA;ortholog_cluster=OG0000450;product=term%3DCyclin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613;Ontology_term=GO:0000079,GO:0019901 LTnewLM_33 Pfam protein_match 290972 291664 . + . Parent=LTnewLM_330014200.2:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 ### LTnewLM_33 AUGUSTUS gene 297696 302705 1 + . ID=LTnewLM_330014300 LTnewLM_33 AUGUSTUS mRNA 297696 302705 1 + . ID=LTnewLM_330014300.1;Parent=LTnewLM_330014300 LTnewLM_33 AUGUSTUS CDS 297696 302705 1 + 0 ID=LTnewLM_330014300.1:CDS:1;Parent=LTnewLM_330014300.1 ### LTnewLM_33 . polypeptide 297696 302705 . + . ID=LTnewLM_330014300.1:pep;Derives_from=LTnewLM_330014300.1;orthologous_to=LmjF.33.0780_mRNA;ortholog_cluster=OG0005078;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 301350 301640 . + . Parent=LTnewLM_330014300.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_33 Liftoff gene 304569 309854 . + . ID=LTnewLM_330014400;coverage=1.0;sequence_ID=0.928;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.0790_0 LTnewLM_33 Liftoff mRNA 304569 309854 . + . ID=LTnewLM_330014400.1;Parent=LTnewLM_330014400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 304569 309854 . + 0 ID=LTnewLM_330014400.1:CDS:1;Parent=LTnewLM_330014400.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 304569 309854 . + . ID=LTnewLM_330014400.1:pep;Derives_from=LTnewLM_330014400.1;orthologous_to=LmjF.33.0790_mRNA;ortholog_cluster=OG0005079;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 311294 312625 1 + . ID=LTnewLM_330014500 LTnewLM_33 AUGUSTUS mRNA 311294 312625 1 + . ID=LTnewLM_330014500.1;Parent=LTnewLM_330014500 LTnewLM_33 AUGUSTUS CDS 311294 312625 1 + 0 ID=LTnewLM_330014500.1:CDS:1;Parent=LTnewLM_330014500.1 ### LTnewLM_33 . polypeptide 311294 312625 . + . ID=LTnewLM_330014500.1:pep;Derives_from=LTnewLM_330014500.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 311300 311923 . + . Parent=LTnewLM_330014500.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 312074 312433 . + . Parent=LTnewLM_330014500.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 314876 316207 1 + . ID=LTnewLM_330014600 LTnewLM_33 AUGUSTUS mRNA 314876 316207 1 + . ID=LTnewLM_330014600.1;Parent=LTnewLM_330014600 LTnewLM_33 AUGUSTUS CDS 314876 316207 1 + 0 ID=LTnewLM_330014600.1:CDS:1;Parent=LTnewLM_330014600.1 ### LTnewLM_33 . polypeptide 314876 316207 . + . ID=LTnewLM_330014600.1:pep;Derives_from=LTnewLM_330014600.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 314882 315505 . + . Parent=LTnewLM_330014600.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 315656 316015 . + . Parent=LTnewLM_330014600.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 318454 319785 1 + . ID=LTnewLM_330014700 LTnewLM_33 AUGUSTUS mRNA 318454 319785 1 + . ID=LTnewLM_330014700.1;Parent=LTnewLM_330014700 LTnewLM_33 AUGUSTUS CDS 318454 319785 1 + 0 ID=LTnewLM_330014700.1:CDS:1;Parent=LTnewLM_330014700.1 ### LTnewLM_33 . polypeptide 318454 319785 . + . ID=LTnewLM_330014700.1:pep;Derives_from=LTnewLM_330014700.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 318460 319083 . + . Parent=LTnewLM_330014700.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 319234 319593 . + . Parent=LTnewLM_330014700.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 322039 323371 0.95 + . ID=LTnewLM_330014800 LTnewLM_33 AUGUSTUS mRNA 322039 323371 0.95 + . ID=LTnewLM_330014800.1;Parent=LTnewLM_330014800 LTnewLM_33 AUGUSTUS CDS 322039 322443 0.96 + 0 ID=LTnewLM_330014800.1:CDS:1;Parent=LTnewLM_330014800.1 LTnewLM_33 AUGUSTUS CDS 322502 323371 0.95 + 0 ID=LTnewLM_330014800.1:CDS:2;Parent=LTnewLM_330014800.1 ### LTnewLM_33 . polypeptide 322039 323371 . + . ID=LTnewLM_330014800.1:pep;Derives_from=LTnewLM_330014800.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 322045 322431 . + . Parent=LTnewLM_330014800.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 322441 322611 . + . Parent=LTnewLM_330014800.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 322762 323121 . + . Parent=LTnewLM_330014800.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 325631 326962 1 + . ID=LTnewLM_330014900 LTnewLM_33 AUGUSTUS mRNA 325631 326962 1 + . ID=LTnewLM_330014900.1;Parent=LTnewLM_330014900 LTnewLM_33 AUGUSTUS CDS 325631 326962 1 + 0 ID=LTnewLM_330014900.1:CDS:1;Parent=LTnewLM_330014900.1 ### LTnewLM_33 . polypeptide 325631 326962 . + . ID=LTnewLM_330014900.1:pep;Derives_from=LTnewLM_330014900.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 325637 326260 . + . Parent=LTnewLM_330014900.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 326411 326770 . + . Parent=LTnewLM_330014900.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 329222 330553 1 + . ID=LTnewLM_330015000 LTnewLM_33 AUGUSTUS mRNA 329222 330553 1 + . ID=LTnewLM_330015000.1;Parent=LTnewLM_330015000 LTnewLM_33 AUGUSTUS CDS 329222 330553 1 + 0 ID=LTnewLM_330015000.1:CDS:1;Parent=LTnewLM_330015000.1 ### LTnewLM_33 . polypeptide 329222 330553 . + . ID=LTnewLM_330015000.1:pep;Derives_from=LTnewLM_330015000.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 329228 329851 . + . Parent=LTnewLM_330015000.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_33 Pfam protein_match 330002 330361 . + . Parent=LTnewLM_330015000.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_33 AUGUSTUS gene 332770 334962 1 + . ID=LTnewLM_330015100 LTnewLM_33 AUGUSTUS mRNA 332770 334962 1 + . ID=LTnewLM_330015100.1;Parent=LTnewLM_330015100 LTnewLM_33 AUGUSTUS CDS 332770 334962 1 + 0 ID=LTnewLM_330015100.1:CDS:1;Parent=LTnewLM_330015100.1 ### LTnewLM_33 . polypeptide 332770 334962 . + . ID=LTnewLM_330015100.1:pep;Derives_from=LTnewLM_330015100.1;orthologous_to=LmjF.33.0830_mRNA;ortholog_cluster=OG0005080;product=term%3DNADH:flavin oxidoreductase / NADH oxidase family/Pyridine nucleotide-disulphide oxidoreductase/Glucose inhibited division protein A/FAD dependent oxidoreductase/HI0933-like protein/FAD binding domain/NAD(P)-binding Rossmann-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00724|Pfam:PF07992|Pfam:PF01134|Pfam:PF01266|Pfam:PF03486|Pfam:PF12831|Pfam:PF00890|Pfam:PF13450;Ontology_term=GO:0016491,GO:0055114,GO:0008033,GO:0050660,GO:0010181 LTnewLM_33 Pfam protein_match 332788 333807 . + . Parent=LTnewLM_330015100.1:pep;Name=PF00724;signature_desc=NADH:flavin oxidoreductase / NADH oxidase family;Ontology_term=GO:0010181,GO:0016491,GO:0055114 LTnewLM_33 Pfam protein_match 333946 334842 . + . Parent=LTnewLM_330015100.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_33 Pfam protein_match 333949 334038 . + . Parent=LTnewLM_330015100.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_33 Pfam protein_match 333949 334056 . + . Parent=LTnewLM_330015100.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_33 Pfam protein_match 333949 334062 . + . Parent=LTnewLM_330015100.1:pep;Name=PF03486;signature_desc=HI0933-like protein LTnewLM_33 Pfam protein_match 333952 334059 . + . Parent=LTnewLM_330015100.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_33 Pfam protein_match 333952 334068 . + . Parent=LTnewLM_330015100.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_33 Pfam protein_match 333958 334116 . + . Parent=LTnewLM_330015100.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_33 AUGUSTUS gene 337438 339567 1 + . ID=LTnewLM_330015200 LTnewLM_33 AUGUSTUS mRNA 337438 339567 1 + . ID=LTnewLM_330015200.1;Parent=LTnewLM_330015200 LTnewLM_33 AUGUSTUS CDS 337438 339567 1 + 0 ID=LTnewLM_330015200.1:CDS:1;Parent=LTnewLM_330015200.1 ### LTnewLM_33 . polypeptide 337438 339567 . + . ID=LTnewLM_330015200.1:pep;Derives_from=LTnewLM_330015200.1;orthologous_to=LmjF.33.0840_mRNA;ortholog_cluster=OG0005081;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 340154 342904 1 + . ID=LTnewLM_330015300 LTnewLM_33 AUGUSTUS mRNA 340154 342904 1 + . ID=LTnewLM_330015300.1;Parent=LTnewLM_330015300 LTnewLM_33 AUGUSTUS CDS 340154 342904 1 + 0 ID=LTnewLM_330015300.1:CDS:1;Parent=LTnewLM_330015300.1 ### LTnewLM_33 . polypeptide 340154 342904 . + . ID=LTnewLM_330015300.1:pep;Derives_from=LTnewLM_330015300.1;orthologous_to=LmjF.33.0850_mRNA;ortholog_cluster=OG0005082;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 343581 344956 0.55 + . ID=LTnewLM_330015400 LTnewLM_33 AUGUSTUS mRNA 343581 344956 0.55 + . ID=LTnewLM_330015400.1;Parent=LTnewLM_330015400 LTnewLM_33 AUGUSTUS CDS 343581 343609 0.6 + 0 ID=LTnewLM_330015400.1:CDS:1;Parent=LTnewLM_330015400.1 LTnewLM_33 AUGUSTUS CDS 343723 344956 0.56 + 1 ID=LTnewLM_330015400.1:CDS:2;Parent=LTnewLM_330015400.1 ### LTnewLM_33 . polypeptide 343581 344956 . + . ID=LTnewLM_330015400.1:pep;Derives_from=LTnewLM_330015400.1;orthologous_to=LmjF.33.0860_mRNA;ortholog_cluster=OG0005083;product=term%3DSulfotransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17784 LTnewLM_33 Pfam protein_match 343662 344504 . + . Parent=LTnewLM_330015400.1:pep;Name=PF17784;signature_desc=Sulfotransferase domain ### LTnewLM_33 AUGUSTUS gene 345771 347246 1 + . ID=LTnewLM_330015500 LTnewLM_33 AUGUSTUS mRNA 345771 347246 1 + . ID=LTnewLM_330015500.1;Parent=LTnewLM_330015500 LTnewLM_33 AUGUSTUS CDS 345771 347246 1 + 0 ID=LTnewLM_330015500.1:CDS:1;Parent=LTnewLM_330015500.1 ### LTnewLM_33 . polypeptide 345771 347246 . + . ID=LTnewLM_330015500.1:pep;Derives_from=LTnewLM_330015500.1;orthologous_to=LmjF.33.0870_mRNA;ortholog_cluster=OG0005084;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 348699 349724 1 + . ID=LTnewLM_330015600 LTnewLM_33 AUGUSTUS mRNA 348699 349724 1 + . ID=LTnewLM_330015600.1;Parent=LTnewLM_330015600 LTnewLM_33 AUGUSTUS CDS 348699 349724 1 + 0 ID=LTnewLM_330015600.1:CDS:1;Parent=LTnewLM_330015600.1 ### LTnewLM_33 . polypeptide 348699 349724 . + . ID=LTnewLM_330015600.1:pep;Derives_from=LTnewLM_330015600.1;orthologous_to=LmjF.33.0880_mRNA;ortholog_cluster=OG0005085;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 351032 351376 1 + . ID=LTnewLM_330015700 LTnewLM_33 AUGUSTUS mRNA 351032 351376 1 + . ID=LTnewLM_330015700.1;Parent=LTnewLM_330015700 LTnewLM_33 AUGUSTUS CDS 351032 351376 1 + 0 ID=LTnewLM_330015700.1:CDS:1;Parent=LTnewLM_330015700.1 ### LTnewLM_33 . polypeptide 351032 351376 . + . ID=LTnewLM_330015700.1:pep;Derives_from=LTnewLM_330015700.1;orthologous_to=LmjF.33.0890_mRNA;ortholog_cluster=OG0005086;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 353167 354912 1 + . ID=LTnewLM_330015800 LTnewLM_33 AUGUSTUS mRNA 353167 354912 1 + . ID=LTnewLM_330015800.1;Parent=LTnewLM_330015800 LTnewLM_33 AUGUSTUS CDS 353167 354912 1 + 0 ID=LTnewLM_330015800.1:CDS:1;Parent=LTnewLM_330015800.1 ### LTnewLM_33 . polypeptide 353167 354912 . + . ID=LTnewLM_330015800.1:pep;Derives_from=LTnewLM_330015800.1;orthologous_to=LmjF.33.0900_mRNA;ortholog_cluster=OG0005087;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_33 Pfam protein_match 353173 353352 . + . Parent=LTnewLM_330015800.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_33 AUGUSTUS gene 356435 356788 1 + . ID=LTnewLM_330015900 LTnewLM_33 AUGUSTUS mRNA 356435 356788 1 + . ID=LTnewLM_330015900.1;Parent=LTnewLM_330015900 LTnewLM_33 AUGUSTUS CDS 356435 356788 1 + 0 ID=LTnewLM_330015900.1:CDS:1;Parent=LTnewLM_330015900.1 ### LTnewLM_33 . polypeptide 356435 356788 . + . ID=LTnewLM_330015900.1:pep;Derives_from=LTnewLM_330015900.1;orthologous_to=LmjF.33.0910_mRNA;ortholog_cluster=OG0005088;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 357835 358494 1 + . ID=LTnewLM_330016000 LTnewLM_33 AUGUSTUS mRNA 357835 358494 1 + . ID=LTnewLM_330016000.1;Parent=LTnewLM_330016000 LTnewLM_33 AUGUSTUS CDS 357835 358494 1 + 0 ID=LTnewLM_330016000.1:CDS:1;Parent=LTnewLM_330016000.1 ### LTnewLM_33 . polypeptide 357835 358494 . + . ID=LTnewLM_330016000.1:pep;Derives_from=LTnewLM_330016000.1;orthologous_to=LTnewLM_150016700.1,LmjF.15.0950_mRNA,LmjF.33.0920_mRNA;ortholog_cluster=OG0000126;product=term%3DKH domain/Ribosomal protein S3%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07650|Pfam:PF00189;Ontology_term=GO:0003723,GO:0006412,GO:0003735,GO:0005840 LTnewLM_33 Pfam protein_match 357895 358104 . + . Parent=LTnewLM_330016000.1:pep;Name=PF07650;signature_desc=KH domain;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 358150 358392 . + . Parent=LTnewLM_330016000.1:pep;Name=PF00189;signature_desc=Ribosomal protein S3%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_33 AUGUSTUS gene 359350 362001 1 + . ID=LTnewLM_330016100 LTnewLM_33 AUGUSTUS mRNA 359350 362001 1 + . ID=LTnewLM_330016100.1;Parent=LTnewLM_330016100 LTnewLM_33 AUGUSTUS CDS 359350 362001 1 + 0 ID=LTnewLM_330016100.1:CDS:1;Parent=LTnewLM_330016100.1 ### LTnewLM_33 . polypeptide 359350 362001 . + . ID=LTnewLM_330016100.1:pep;Derives_from=LTnewLM_330016100.1;orthologous_to=LmjF.33.0930_mRNA;ortholog_cluster=OG0005089;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 362835 364484 1 + . ID=LTnewLM_330016200 LTnewLM_33 AUGUSTUS mRNA 362835 364484 1 + . ID=LTnewLM_330016200.1;Parent=LTnewLM_330016200 LTnewLM_33 AUGUSTUS CDS 362835 364484 1 + 0 ID=LTnewLM_330016200.1:CDS:1;Parent=LTnewLM_330016200.1 ### LTnewLM_33 . polypeptide 362835 364484 . + . ID=LTnewLM_330016200.1:pep;Derives_from=LTnewLM_330016200.1;orthologous_to=LmjF.33.0935_mRNA;ortholog_cluster=OG0005090;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 366082 369612 1 + . ID=LTnewLM_330016300 LTnewLM_33 AUGUSTUS mRNA 366082 369612 1 + . ID=LTnewLM_330016300.1;Parent=LTnewLM_330016300 LTnewLM_33 AUGUSTUS CDS 366082 369612 1 + 0 ID=LTnewLM_330016300.1:CDS:1;Parent=LTnewLM_330016300.1 ### LTnewLM_33 . polypeptide 366082 369612 . + . ID=LTnewLM_330016300.1:pep;Derives_from=LTnewLM_330016300.1;orthologous_to=LmjF.33.0940_mRNA;ortholog_cluster=OG0005091;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 370329 375551 1 + . ID=LTnewLM_330016400 LTnewLM_33 AUGUSTUS mRNA 370329 375551 1 + . ID=LTnewLM_330016400.1;Parent=LTnewLM_330016400 LTnewLM_33 AUGUSTUS CDS 370329 375551 1 + 0 ID=LTnewLM_330016400.1:CDS:1;Parent=LTnewLM_330016400.1 ### LTnewLM_33 . polypeptide 370329 375551 . + . ID=LTnewLM_330016400.1:pep;Derives_from=LTnewLM_330016400.1;orthologous_to=LmjF.33.0950_mRNA;ortholog_cluster=OG0005092;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 371373 371462 . + . Parent=LTnewLM_330016400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 . pseudogene 379265 380897 . + . ID=LTnewLM_330016500:pseudogene;coverage=0.989;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.0960_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 379265 380897 . + . ID=LTnewLM_330016500.1;Parent=LTnewLM_330016500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 379265 380897 . + . ID=LTnewLM_330016500.1:pseudogenic_exon:1;Parent=LTnewLM_330016500.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 379265 380897 . + . ID=LTnewLM_330016500.1:pep;Derives_from=LTnewLM_330016500.1;orthologous_to=LmjF.33.0960_mRNA;ortholog_cluster=OG0007630;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 385033 386814 1 + . ID=LTnewLM_330016600 LTnewLM_33 AUGUSTUS mRNA 385033 386814 1 + . ID=LTnewLM_330016600.1;Parent=LTnewLM_330016600 LTnewLM_33 AUGUSTUS CDS 385033 386814 1 + 0 ID=LTnewLM_330016600.1:CDS:1;Parent=LTnewLM_330016600.1 ### LTnewLM_33 . polypeptide 385033 386814 . + . ID=LTnewLM_330016600.1:pep;Derives_from=LTnewLM_330016600.1;orthologous_to=LmjF.33.0970_mRNA;ortholog_cluster=OG0005093;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 389970 391025 1 + . ID=LTnewLM_330016700 LTnewLM_33 AUGUSTUS mRNA 389970 391025 1 + . ID=LTnewLM_330016700.1;Parent=LTnewLM_330016700 LTnewLM_33 AUGUSTUS CDS 389970 391025 1 + 0 ID=LTnewLM_330016700.1:CDS:1;Parent=LTnewLM_330016700.1 ### LTnewLM_33 . polypeptide 389970 391025 . + . ID=LTnewLM_330016700.1:pep;Derives_from=LTnewLM_330016700.1;orthologous_to=LmjF.33.0980_mRNA;ortholog_cluster=OG0005094;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 392439 392867 1 + . ID=LTnewLM_330016800 LTnewLM_33 AUGUSTUS mRNA 392439 392867 1 + . ID=LTnewLM_330016800.1;Parent=LTnewLM_330016800 LTnewLM_33 AUGUSTUS CDS 392439 392867 1 + 0 ID=LTnewLM_330016800.1:CDS:1;Parent=LTnewLM_330016800.1 ### LTnewLM_33 . polypeptide 392439 392867 . + . ID=LTnewLM_330016800.1:pep;Derives_from=LTnewLM_330016800.1;orthologous_to=LmjF.33.0990_mRNA;ortholog_cluster=OG0005095;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_33 Pfam protein_match 392520 392846 . + . Parent=LTnewLM_330016800.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_33 AUGUSTUS gene 395635 398991 1 + . ID=LTnewLM_330016900 LTnewLM_33 AUGUSTUS mRNA 395635 398991 1 + . ID=LTnewLM_330016900.1;Parent=LTnewLM_330016900 LTnewLM_33 AUGUSTUS CDS 395635 398991 1 + 0 ID=LTnewLM_330016900.1:CDS:1;Parent=LTnewLM_330016900.1 ### LTnewLM_33 . polypeptide 395635 398991 . + . ID=LTnewLM_330016900.1:pep;Derives_from=LTnewLM_330016900.1;orthologous_to=LmjF.33.1000_mRNA;ortholog_cluster=OG0005096;product=term%3DDiacylglycerol acyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03982;Ontology_term=GO:0016747 LTnewLM_33 Pfam protein_match 397792 397962 . + . Parent=LTnewLM_330016900.1:pep;Name=PF03982;signature_desc=Diacylglycerol acyltransferase;Ontology_term=GO:0016747 ### LTnewLM_33 AUGUSTUS gene 402147 405775 0.68 + . ID=LTnewLM_330017000 LTnewLM_33 AUGUSTUS mRNA 402147 405775 0.68 + . ID=LTnewLM_330017000.1;Parent=LTnewLM_330017000 LTnewLM_33 AUGUSTUS CDS 402147 405421 0.68 + 0 ID=LTnewLM_330017000.1:CDS:1;Parent=LTnewLM_330017000.1 LTnewLM_33 AUGUSTUS CDS 405472 405775 1 + 1 ID=LTnewLM_330017000.1:CDS:2;Parent=LTnewLM_330017000.1 ### LTnewLM_33 . polypeptide 402147 405775 . + . ID=LTnewLM_330017000.1:pep;Derives_from=LTnewLM_330017000.1;orthologous_to=LmjF.33.1010_mRNA;ortholog_cluster=OG0005097;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/Cation transport ATPase (P-type)/haloacid dehalogenase-like hydrolase/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF13246|Pfam:PF08282|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_33 Pfam protein_match 402375 402536 . + . Parent=LTnewLM_330017000.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_33 Pfam protein_match 402822 403367 . + . Parent=LTnewLM_330017000.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_33 Pfam protein_match 403713 404000 . + . Parent=LTnewLM_330017000.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_33 Pfam protein_match 404802 404954 . + . Parent=LTnewLM_330017000.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_33 Pfam protein_match 405090 405614 . + . Parent=LTnewLM_330017000.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus ### LTnewLM_33 AUGUSTUS gene 414590 417460 1 + . ID=LTnewLM_330017100 LTnewLM_33 AUGUSTUS mRNA 414590 417460 1 + . ID=LTnewLM_330017100.1;Parent=LTnewLM_330017100 LTnewLM_33 AUGUSTUS CDS 414590 417460 1 + 0 ID=LTnewLM_330017100.1:CDS:1;Parent=LTnewLM_330017100.1 ### LTnewLM_33 . polypeptide 414590 417460 . + . ID=LTnewLM_330017100.1:pep;Derives_from=LTnewLM_330017100.1;orthologous_to=LmjF.33.1020_mRNA;ortholog_cluster=OG0005098;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_33 Pfam protein_match 416879 417325 . + . Parent=LTnewLM_330017100.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_33 AUGUSTUS gene 420281 421768 1 + . ID=LTnewLM_330017200 LTnewLM_33 AUGUSTUS mRNA 420281 421768 1 + . ID=LTnewLM_330017200.1;Parent=LTnewLM_330017200 LTnewLM_33 AUGUSTUS CDS 420281 421768 1 + 0 ID=LTnewLM_330017200.1:CDS:1;Parent=LTnewLM_330017200.1 ### LTnewLM_33 . polypeptide 420281 421768 . + . ID=LTnewLM_330017200.1:pep;Derives_from=LTnewLM_330017200.1;orthologous_to=LmjF.33.1030_mRNA;ortholog_cluster=OG0005099;product=term%3DProtein prenyltransferase alpha subunit repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01239;Ontology_term=GO:0018342,GO:0008318 LTnewLM_33 Pfam protein_match 420605 420694 . + . Parent=LTnewLM_330017200.1:pep;Name=PF01239;signature_desc=Protein prenyltransferase alpha subunit repeat;Ontology_term=GO:0008318,GO:0018342 LTnewLM_33 Pfam protein_match 420815 420901 . + . Parent=LTnewLM_330017200.1:pep;Name=PF01239;signature_desc=Protein prenyltransferase alpha subunit repeat;Ontology_term=GO:0008318,GO:0018342 LTnewLM_33 Pfam protein_match 421034 421108 . + . Parent=LTnewLM_330017200.1:pep;Name=PF01239;signature_desc=Protein prenyltransferase alpha subunit repeat;Ontology_term=GO:0008318,GO:0018342 ### LTnewLM_33 AUGUSTUS gene 422442 422975 1 + . ID=LTnewLM_330017300 LTnewLM_33 AUGUSTUS mRNA 422442 422975 1 + . ID=LTnewLM_330017300.1;Parent=LTnewLM_330017300 LTnewLM_33 AUGUSTUS CDS 422442 422975 1 + 0 ID=LTnewLM_330017300.1:CDS:1;Parent=LTnewLM_330017300.1 ### LTnewLM_33 . polypeptide 422442 422975 . + . ID=LTnewLM_330017300.1:pep;Derives_from=LTnewLM_330017300.1;orthologous_to=LmjF.33.1035_mRNA;ortholog_cluster=OG0005100;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 426622 427974 1 + . ID=LTnewLM_330017400 LTnewLM_33 AUGUSTUS mRNA 426622 427974 1 + . ID=LTnewLM_330017400.1;Parent=LTnewLM_330017400 LTnewLM_33 AUGUSTUS CDS 426622 427974 1 + 0 ID=LTnewLM_330017400.1:CDS:1;Parent=LTnewLM_330017400.1 ### LTnewLM_33 . polypeptide 426622 427974 . + . ID=LTnewLM_330017400.1:pep;Derives_from=LTnewLM_330017400.1;orthologous_to=LmjF.33.1040_mRNA;ortholog_cluster=OG0005101;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 428558 429844 1 + . ID=LTnewLM_330017500 LTnewLM_33 AUGUSTUS mRNA 428558 429844 1 + . ID=LTnewLM_330017500.1;Parent=LTnewLM_330017500 LTnewLM_33 AUGUSTUS CDS 428558 429844 1 + 0 ID=LTnewLM_330017500.1:CDS:1;Parent=LTnewLM_330017500.1 ### LTnewLM_33 . polypeptide 428558 429844 . + . ID=LTnewLM_330017500.1:pep;Derives_from=LTnewLM_330017500.1;orthologous_to=LmjF.33.1050_mRNA;ortholog_cluster=OG0005102;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 431369 434680 1 + . ID=LTnewLM_330017600 LTnewLM_33 AUGUSTUS mRNA 431369 434680 1 + . ID=LTnewLM_330017600.1;Parent=LTnewLM_330017600 LTnewLM_33 AUGUSTUS CDS 431369 434680 1 + 0 ID=LTnewLM_330017600.1:CDS:1;Parent=LTnewLM_330017600.1 ### LTnewLM_33 . polypeptide 431369 434680 . + . ID=LTnewLM_330017600.1:pep;Derives_from=LTnewLM_330017600.1;orthologous_to=LmjF.33.1060_mRNA;ortholog_cluster=OG0005103;product=term%3DVoltage gated chloride channel/CBS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00654|Pfam:PF00571;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020 LTnewLM_33 Pfam protein_match 432224 433756 . + . Parent=LTnewLM_330017600.1:pep;Name=PF00654;signature_desc=Voltage gated chloride channel;Ontology_term=GO:0005247,GO:0006821,GO:0055085,GO:0016020 LTnewLM_33 Pfam protein_match 433865 434017 . + . Parent=LTnewLM_330017600.1:pep;Name=PF00571;signature_desc=CBS domain ### LTnewLM_33 AUGUSTUS gene 435515 436246 1 + . ID=LTnewLM_330017700 LTnewLM_33 AUGUSTUS mRNA 435515 436246 1 + . ID=LTnewLM_330017700.1;Parent=LTnewLM_330017700 LTnewLM_33 AUGUSTUS CDS 435515 436246 1 + 0 ID=LTnewLM_330017700.1:CDS:1;Parent=LTnewLM_330017700.1 ### LTnewLM_33 . polypeptide 435515 436246 . + . ID=LTnewLM_330017700.1:pep;Derives_from=LTnewLM_330017700.1;orthologous_to=LmjF.33.1070_mRNA;ortholog_cluster=OG0005104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 438621 439958 1 + . ID=LTnewLM_330017800 LTnewLM_33 AUGUSTUS mRNA 438621 439958 1 + . ID=LTnewLM_330017800.1;Parent=LTnewLM_330017800 LTnewLM_33 AUGUSTUS CDS 438621 439958 1 + 0 ID=LTnewLM_330017800.1:CDS:1;Parent=LTnewLM_330017800.1 ### LTnewLM_33 . polypeptide 438621 439958 . + . ID=LTnewLM_330017800.1:pep;Derives_from=LTnewLM_330017800.1;orthologous_to=LmjF.33.1080_mRNA;ortholog_cluster=OG0005105;product=term%3DYEATS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03366;Ontology_term=GO:0005634,GO:0006355 LTnewLM_33 Pfam protein_match 439068 439235 . + . Parent=LTnewLM_330017800.1:pep;Name=PF03366;signature_desc=YEATS family;Ontology_term=GO:0006355,GO:0005634 ### LTnewLM_33 AUGUSTUS gene 442588 443199 1 + . ID=LTnewLM_330017900 LTnewLM_33 AUGUSTUS mRNA 442588 443199 1 + . ID=LTnewLM_330017900.1;Parent=LTnewLM_330017900 LTnewLM_33 AUGUSTUS CDS 442588 443199 1 + 0 ID=LTnewLM_330017900.1:CDS:1;Parent=LTnewLM_330017900.1 ### LTnewLM_33 . polypeptide 442588 443199 . + . ID=LTnewLM_330017900.1:pep;Derives_from=LTnewLM_330017900.1;orthologous_to=LmjF.33.1090_mRNA;ortholog_cluster=OG0005106;product=term%3DGuanylate kinase/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00625|Pfam:PF01926;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 442606 443157 . + . Parent=LTnewLM_330017900.1:pep;Name=PF00625;signature_desc=Guanylate kinase LTnewLM_33 Pfam protein_match 442612 442821 . + . Parent=LTnewLM_330017900.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_33 Liftoff gene 446048 449035 . + . ID=LTnewLM_330018000;coverage=1.0;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.1100_0 LTnewLM_33 Liftoff mRNA 446048 449035 . + . ID=LTnewLM_330018000.1;Parent=LTnewLM_330018000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 446048 449035 . + 0 ID=LTnewLM_330018000.1:CDS:1;Parent=LTnewLM_330018000.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 446048 449035 . + . ID=LTnewLM_330018000.1:pep;Derives_from=LTnewLM_330018000.1;orthologous_to=LmjF.33.1100_mRNA;ortholog_cluster=OG0005107;product=term%3DCW-type Zinc Finger%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07496;Ontology_term=GO:0008270 LTnewLM_33 Pfam protein_match 448880 449014 . + . Parent=LTnewLM_330018000.1:pep;Name=PF07496;signature_desc=CW-type Zinc Finger;Ontology_term=GO:0008270 ### LTnewLM_33 AUGUSTUS gene 450400 452751 1 + . ID=LTnewLM_330018100 LTnewLM_33 AUGUSTUS mRNA 450400 452751 1 + . ID=LTnewLM_330018100.1;Parent=LTnewLM_330018100 LTnewLM_33 AUGUSTUS CDS 450400 452751 1 + 0 ID=LTnewLM_330018100.1:CDS:1;Parent=LTnewLM_330018100.1 ### LTnewLM_33 . polypeptide 450400 452751 . + . ID=LTnewLM_330018100.1:pep;Derives_from=LTnewLM_330018100.1;orthologous_to=LmjF.33.1110_mRNA;ortholog_cluster=OG0005108;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 453710 454711 1 + . ID=LTnewLM_330018200 LTnewLM_33 AUGUSTUS mRNA 453710 454711 1 + . ID=LTnewLM_330018200.1;Parent=LTnewLM_330018200 LTnewLM_33 AUGUSTUS CDS 453710 454711 1 + 0 ID=LTnewLM_330018200.1:CDS:1;Parent=LTnewLM_330018200.1 ### LTnewLM_33 . polypeptide 453710 454711 . + . ID=LTnewLM_330018200.1:pep;Derives_from=LTnewLM_330018200.1;orthologous_to=LmjF.33.1120_mRNA;ortholog_cluster=OG0005109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 457599 459641 1 + . ID=LTnewLM_330018300 LTnewLM_33 AUGUSTUS mRNA 457599 459641 1 + . ID=LTnewLM_330018300.1;Parent=LTnewLM_330018300 LTnewLM_33 AUGUSTUS CDS 457599 459641 1 + 0 ID=LTnewLM_330018300.1:CDS:1;Parent=LTnewLM_330018300.1 ### LTnewLM_33 . polypeptide 457599 459641 . + . ID=LTnewLM_330018300.1:pep;Derives_from=LTnewLM_330018300.1;orthologous_to=LmjF.33.1130_mRNA;ortholog_cluster=OG0005110;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 463666 465078 1 + . ID=LTnewLM_330018400 LTnewLM_33 AUGUSTUS mRNA 463666 465078 1 + . ID=LTnewLM_330018400.1;Parent=LTnewLM_330018400 LTnewLM_33 AUGUSTUS CDS 463666 465078 1 + 0 ID=LTnewLM_330018400.1:CDS:1;Parent=LTnewLM_330018400.1 ### LTnewLM_33 . polypeptide 463666 465078 . + . ID=LTnewLM_330018400.1:pep;Derives_from=LTnewLM_330018400.1;orthologous_to=LmjF.33.1140_mRNA;ortholog_cluster=OG0005111;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 466951 469485 1 + . ID=LTnewLM_330018500 LTnewLM_33 AUGUSTUS mRNA 466951 469485 1 + . ID=LTnewLM_330018500.1;Parent=LTnewLM_330018500 LTnewLM_33 AUGUSTUS CDS 466951 469485 1 + 0 ID=LTnewLM_330018500.1:CDS:1;Parent=LTnewLM_330018500.1 ### LTnewLM_33 . polypeptide 466951 469485 . + . ID=LTnewLM_330018500.1:pep;Derives_from=LTnewLM_330018500.1;orthologous_to=LmjF.33.1150_mRNA;ortholog_cluster=OG0005112;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468181 468276 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468292 468360 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468394 468492 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468511 468561 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468607 468705 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468724 468789 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 468826 468915 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_33 Pfam protein_match 469162 469248 . + . Parent=LTnewLM_330018500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_33 AUGUSTUS gene 478254 478724 1 + . ID=LTnewLM_330018600 LTnewLM_33 AUGUSTUS mRNA 478254 478724 1 + . ID=LTnewLM_330018600.1;Parent=LTnewLM_330018600 LTnewLM_33 AUGUSTUS CDS 478254 478724 1 + 0 ID=LTnewLM_330018600.1:CDS:1;Parent=LTnewLM_330018600.1 ### LTnewLM_33 . polypeptide 478254 478724 . + . ID=LTnewLM_330018600.1:pep;Derives_from=LTnewLM_330018600.1;orthologous_to=LmjF.33.1160_mRNA;ortholog_cluster=OG0005113;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 480974 485128 1 + . ID=LTnewLM_330018700 LTnewLM_33 AUGUSTUS mRNA 480974 485128 1 + . ID=LTnewLM_330018700.1;Parent=LTnewLM_330018700 LTnewLM_33 AUGUSTUS CDS 480974 485128 1 + 0 ID=LTnewLM_330018700.1:CDS:1;Parent=LTnewLM_330018700.1 ### LTnewLM_33 . polypeptide 480974 485128 . + . ID=LTnewLM_330018700.1:pep;Derives_from=LTnewLM_330018700.1;orthologous_to=LmjF.33.1170_mRNA;ortholog_cluster=OG0005114;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 486189 487496 1 + . ID=LTnewLM_330018800 LTnewLM_33 AUGUSTUS mRNA 486189 487496 1 + . ID=LTnewLM_330018800.1;Parent=LTnewLM_330018800 LTnewLM_33 AUGUSTUS CDS 486189 487496 1 + 0 ID=LTnewLM_330018800.1:CDS:1;Parent=LTnewLM_330018800.1 ### LTnewLM_33 . polypeptide 486189 487496 . + . ID=LTnewLM_330018800.1:pep;Derives_from=LTnewLM_330018800.1;orthologous_to=LmjF.33.1180_mRNA;ortholog_cluster=OG0005115;product=term%3DAxonemal dynein light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10211 LTnewLM_33 Pfam protein_match 486912 487421 . + . Parent=LTnewLM_330018800.1:pep;Name=PF10211;signature_desc=Axonemal dynein light chain ### LTnewLM_33 AUGUSTUS gene 488853 491516 1 + . ID=LTnewLM_330018900 LTnewLM_33 AUGUSTUS mRNA 488853 491516 1 + . ID=LTnewLM_330018900.1;Parent=LTnewLM_330018900 LTnewLM_33 AUGUSTUS CDS 488853 491516 1 + 0 ID=LTnewLM_330018900.1:CDS:1;Parent=LTnewLM_330018900.1 ### LTnewLM_33 . polypeptide 488853 491516 . + . ID=LTnewLM_330018900.1:pep;Derives_from=LTnewLM_330018900.1;orthologous_to=LmjF.33.1190_mRNA;ortholog_cluster=OG0005116;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 492263 494233 1 + . ID=LTnewLM_330019000 LTnewLM_33 AUGUSTUS mRNA 492263 494233 1 + . ID=LTnewLM_330019000.1;Parent=LTnewLM_330019000 LTnewLM_33 AUGUSTUS CDS 492263 494233 1 + 0 ID=LTnewLM_330019000.1:CDS:1;Parent=LTnewLM_330019000.1 ### LTnewLM_33 . polypeptide 492263 494233 . + . ID=LTnewLM_330019000.1:pep;Derives_from=LTnewLM_330019000.1;orthologous_to=LmjF.33.1200_mRNA;ortholog_cluster=OG0005117;product=term%3DATPase family associated with various cellular activities (AAA)/AAA domain (dynein-related subfamily)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF07728;Ontology_term=GO:0016887,GO:0005524 LTnewLM_33 Pfam protein_match 493247 493354 . + . Parent=LTnewLM_330019000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_33 Pfam protein_match 493247 493372 . + . Parent=LTnewLM_330019000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_33 AUGUSTUS gene 495345 496439 1 + . ID=LTnewLM_330019100 LTnewLM_33 AUGUSTUS mRNA 495345 496439 1 + . ID=LTnewLM_330019100.1;Parent=LTnewLM_330019100 LTnewLM_33 AUGUSTUS CDS 495345 496439 1 + 0 ID=LTnewLM_330019100.1:CDS:1;Parent=LTnewLM_330019100.1 ### LTnewLM_33 . polypeptide 495345 496439 . + . ID=LTnewLM_330019100.1:pep;Derives_from=LTnewLM_330019100.1;orthologous_to=LmjF.33.1210_mRNA;ortholog_cluster=OG0005118;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 497626 500037 1 + . ID=LTnewLM_330019200 LTnewLM_33 AUGUSTUS mRNA 497626 500037 1 + . ID=LTnewLM_330019200.1;Parent=LTnewLM_330019200 LTnewLM_33 AUGUSTUS CDS 497626 500037 1 + 0 ID=LTnewLM_330019200.1:CDS:1;Parent=LTnewLM_330019200.1 ### LTnewLM_33 . polypeptide 497626 500037 . + . ID=LTnewLM_330019200.1:pep;Derives_from=LTnewLM_330019200.1;orthologous_to=LmjF.33.1220_mRNA;ortholog_cluster=OG0005119;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 501113 502978 1 + . ID=LTnewLM_330019300 LTnewLM_33 AUGUSTUS mRNA 501113 502978 1 + . ID=LTnewLM_330019300.1;Parent=LTnewLM_330019300 LTnewLM_33 AUGUSTUS CDS 501113 502978 1 + 0 ID=LTnewLM_330019300.1:CDS:1;Parent=LTnewLM_330019300.1 ### LTnewLM_33 . polypeptide 501113 502978 . + . ID=LTnewLM_330019300.1:pep;Derives_from=LTnewLM_330019300.1;orthologous_to=LmjF.33.1230_mRNA;ortholog_cluster=OG0005120;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 501572 501679 . + . Parent=LTnewLM_330019300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 . pseudogene 503997 506688 . + . ID=LTnewLM_330019400:pseudogene;coverage=0.989;sequence_ID=0.888;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.1240_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 503997 506688 . + . ID=LTnewLM_330019400.1;Parent=LTnewLM_330019400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 503997 506688 . + . ID=LTnewLM_330019400.1:pseudogenic_exon:1;Parent=LTnewLM_330019400.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 503997 506688 . + . ID=LTnewLM_330019400.1:pep;Derives_from=LTnewLM_330019400.1;orthologous_to=LmjF.33.1240_mRNA;ortholog_cluster=OG0007631;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 504651 504746 . + . Parent=LTnewLM_330019400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 507565 508782 1 + . ID=LTnewLM_330019500 LTnewLM_33 AUGUSTUS mRNA 507565 508782 1 + . ID=LTnewLM_330019500.1;Parent=LTnewLM_330019500 LTnewLM_33 AUGUSTUS CDS 507565 508782 1 + 0 ID=LTnewLM_330019500.1:CDS:1;Parent=LTnewLM_330019500.1 ### LTnewLM_33 . polypeptide 507565 508782 . + . ID=LTnewLM_330019500.1:pep;Derives_from=LTnewLM_330019500.1;orthologous_to=LmjF.33.1245_mRNA;ortholog_cluster=OG0005121;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 509590 510573 1 + . ID=LTnewLM_330019600 LTnewLM_33 AUGUSTUS mRNA 509590 510573 1 + . ID=LTnewLM_330019600.1;Parent=LTnewLM_330019600 LTnewLM_33 AUGUSTUS CDS 509590 510573 1 + 0 ID=LTnewLM_330019600.1:CDS:1;Parent=LTnewLM_330019600.1 ### LTnewLM_33 . polypeptide 509590 510573 . + . ID=LTnewLM_330019600.1:pep;Derives_from=LTnewLM_330019600.1;orthologous_to=LmjF.33.1250_mRNA;ortholog_cluster=OG0005122;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 511712 514725 . + . ID=LTnewLM_330019700:pseudogene;coverage=0.996;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.1260_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 511712 514725 . + . ID=LTnewLM_330019700.1;Parent=LTnewLM_330019700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 511712 514725 . + . ID=LTnewLM_330019700.1:pseudogenic_exon:1;Parent=LTnewLM_330019700.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 511712 514725 . + . ID=LTnewLM_330019700.1:pep;Derives_from=LTnewLM_330019700.1;orthologous_to=LmjF.33.1260_mRNA;ortholog_cluster=OG0007632;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 515461 516453 1 + . ID=LTnewLM_330019800 LTnewLM_33 AUGUSTUS mRNA 515461 516453 1 + . ID=LTnewLM_330019800.1;Parent=LTnewLM_330019800 LTnewLM_33 AUGUSTUS CDS 515461 516453 1 + 0 ID=LTnewLM_330019800.1:CDS:1;Parent=LTnewLM_330019800.1 ### LTnewLM_33 . polypeptide 515461 516453 . + . ID=LTnewLM_330019800.1:pep;Derives_from=LTnewLM_330019800.1;orthologous_to=LmjF.33.1270_mRNA;ortholog_cluster=OG0005123;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 517096 517599 1 + . ID=LTnewLM_330019900 LTnewLM_33 AUGUSTUS mRNA 517096 517599 1 + . ID=LTnewLM_330019900.1;Parent=LTnewLM_330019900 LTnewLM_33 AUGUSTUS CDS 517096 517599 1 + 0 ID=LTnewLM_330019900.1:CDS:1;Parent=LTnewLM_330019900.1 ### LTnewLM_33 . polypeptide 517096 517599 . + . ID=LTnewLM_330019900.1:pep;Derives_from=LTnewLM_330019900.1;orthologous_to=LmjF.33.1280_mRNA;ortholog_cluster=OG0005124;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_33 Pfam protein_match 517264 517569 . + . Parent=LTnewLM_330019900.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_33 AUGUSTUS gene 519761 521536 1 + . ID=LTnewLM_330020000 LTnewLM_33 AUGUSTUS mRNA 519761 521536 1 + . ID=LTnewLM_330020000.1;Parent=LTnewLM_330020000 LTnewLM_33 AUGUSTUS CDS 519761 521536 1 + 0 ID=LTnewLM_330020000.1:CDS:1;Parent=LTnewLM_330020000.1 ### LTnewLM_33 . polypeptide 519761 521536 . + . ID=LTnewLM_330020000.1:pep;Derives_from=LTnewLM_330020000.1;orthologous_to=LmjF.33.1290_mRNA;ortholog_cluster=OG0005125;product=term%3DMajor Facilitator Superfamily/MFS_1 like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF12832;Ontology_term=GO:0016021,GO:0055085 LTnewLM_33 Pfam protein_match 520115 520816 . + . Parent=LTnewLM_330020000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_33 Pfam protein_match 520160 521167 . + . Parent=LTnewLM_330020000.1:pep;Name=PF12832;signature_desc=MFS_1 like family ### LTnewLM_33 AUGUSTUS gene 523803 524189 1 + . ID=LTnewLM_330020100 LTnewLM_33 AUGUSTUS mRNA 523803 524189 1 + . ID=LTnewLM_330020100.1;Parent=LTnewLM_330020100 LTnewLM_33 AUGUSTUS CDS 523803 524189 1 + 0 ID=LTnewLM_330020100.1:CDS:1;Parent=LTnewLM_330020100.1 ### LTnewLM_33 . polypeptide 523803 524189 . + . ID=LTnewLM_330020100.1:pep;Derives_from=LTnewLM_330020100.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 525716 527677 1 + . ID=LTnewLM_330020200 LTnewLM_33 AUGUSTUS mRNA 525716 527677 1 + . ID=LTnewLM_330020200.1;Parent=LTnewLM_330020200 LTnewLM_33 AUGUSTUS CDS 525716 527677 1 + 0 ID=LTnewLM_330020200.1:CDS:1;Parent=LTnewLM_330020200.1 ### LTnewLM_33 . polypeptide 525716 527677 . + . ID=LTnewLM_330020200.1:pep;Derives_from=LTnewLM_330020200.1;orthologous_to=LmjF.33.1300_mRNA;ortholog_cluster=OG0005126;product=term%3DABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03109 LTnewLM_33 Pfam protein_match 526052 526906 . + . Parent=LTnewLM_330020200.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_33 AUGUSTUS gene 529530 530165 1 + . ID=LTnewLM_330020300 LTnewLM_33 AUGUSTUS mRNA 529530 530165 1 + . ID=LTnewLM_330020300.1;Parent=LTnewLM_330020300 LTnewLM_33 AUGUSTUS CDS 529530 530165 1 + 0 ID=LTnewLM_330020300.1:CDS:1;Parent=LTnewLM_330020300.1 ### LTnewLM_33 . polypeptide 529530 530165 . + . ID=LTnewLM_330020300.1:pep;Derives_from=LTnewLM_330020300.1;orthologous_to=LmjF.33.1305_mRNA;ortholog_cluster=OG0005127;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 531487 533499 1 + . ID=LTnewLM_330020400 LTnewLM_33 AUGUSTUS mRNA 531487 533499 1 + . ID=LTnewLM_330020400.1;Parent=LTnewLM_330020400 LTnewLM_33 AUGUSTUS CDS 531487 533499 1 + 0 ID=LTnewLM_330020400.1:CDS:1;Parent=LTnewLM_330020400.1 ### LTnewLM_33 . polypeptide 531487 533499 . + . ID=LTnewLM_330020400.1:pep;Derives_from=LTnewLM_330020400.1;orthologous_to=LmjF.33.1310_mRNA;ortholog_cluster=OG0005128;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 534693 535490 1 + . ID=LTnewLM_330020500 LTnewLM_33 AUGUSTUS mRNA 534693 535490 1 + . ID=LTnewLM_330020500.1;Parent=LTnewLM_330020500 LTnewLM_33 AUGUSTUS CDS 534693 535490 1 + 0 ID=LTnewLM_330020500.1:CDS:1;Parent=LTnewLM_330020500.1 ### LTnewLM_33 . polypeptide 534693 535490 . + . ID=LTnewLM_330020500.1:pep;Derives_from=LTnewLM_330020500.1;orthologous_to=LmjF.33.1320_mRNA;ortholog_cluster=OG0005129;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 Aragorn_1.2.36 gene 535802 535875 . - . ID=LTnewLM_330020600 LTnewLM_33 Aragorn_1.2.36 tRNA 535802 535875 . - . ID=LTnewLM_330020600:tRNA;Parent=LTnewLM_330020600;aa=Lys;anticodon=ctt;gc_content=62.2 ### LTnewLM_33 AUGUSTUS gene 537641 538885 1 + . ID=LTnewLM_330020700 LTnewLM_33 AUGUSTUS mRNA 537641 538885 1 + . ID=LTnewLM_330020700.1;Parent=LTnewLM_330020700 LTnewLM_33 AUGUSTUS CDS 537641 538885 1 + 0 ID=LTnewLM_330020700.1:CDS:1;Parent=LTnewLM_330020700.1 ### LTnewLM_33 . polypeptide 537641 538885 . + . ID=LTnewLM_330020700.1:pep;Derives_from=LTnewLM_330020700.1;orthologous_to=LmjF.33.1330_mRNA;ortholog_cluster=OG0005130;product=term%3DAminotransferase class I and II/DegT/DnrJ/EryC1/StrS aminotransferase family/Aminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155|Pfam:PF01041|Pfam:PF00266;Ontology_term=GO:0030170,GO:0008152,GO:0009058 LTnewLM_33 Pfam protein_match 537731 538855 . + . Parent=LTnewLM_330020700.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 LTnewLM_33 Pfam protein_match 537914 538267 . + . Parent=LTnewLM_330020700.1:pep;Name=PF01041;signature_desc=DegT/DnrJ/EryC1/StrS aminotransferase family LTnewLM_33 Pfam protein_match 537920 538273 . + . Parent=LTnewLM_330020700.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_33 AUGUSTUS gene 539635 540462 1 + . ID=LTnewLM_330020800 LTnewLM_33 AUGUSTUS mRNA 539635 540462 1 + . ID=LTnewLM_330020800.1;Parent=LTnewLM_330020800 LTnewLM_33 AUGUSTUS CDS 539635 540462 1 + 0 ID=LTnewLM_330020800.1:CDS:1;Parent=LTnewLM_330020800.1 ### LTnewLM_33 . polypeptide 539635 540462 . + . ID=LTnewLM_330020800.1:pep;Derives_from=LTnewLM_330020800.1;orthologous_to=LmjF.33.1340_mRNA;ortholog_cluster=OG0005131;product=term%3DSyntaxin/SNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00804|Pfam:PF05739;Ontology_term=GO:0016020,GO:0005515 LTnewLM_33 Pfam protein_match 539806 540345 . + . Parent=LTnewLM_330020800.1:pep;Name=PF00804;signature_desc=Syntaxin;Ontology_term=GO:0016020 LTnewLM_33 Pfam protein_match 540349 540447 . + . Parent=LTnewLM_330020800.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 540840 541385 1 + . ID=LTnewLM_330020900 LTnewLM_33 AUGUSTUS mRNA 540840 541385 1 + . ID=LTnewLM_330020900.1;Parent=LTnewLM_330020900 LTnewLM_33 AUGUSTUS CDS 540840 541385 1 + 0 ID=LTnewLM_330020900.1:CDS:1;Parent=LTnewLM_330020900.1 ### LTnewLM_33 . polypeptide 540840 541385 . + . ID=LTnewLM_330020900.1:pep;Derives_from=LTnewLM_330020900.1;orthologous_to=LmjF.33.1350_mRNA;ortholog_cluster=OG0005132;product=term%3DUPF0113 Pre-PUA domain/UPF0113 PUA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17833|Pfam:PF03657 LTnewLM_33 Pfam protein_match 540843 541085 . + . Parent=LTnewLM_330020900.1:pep;Name=PF17833;signature_desc=UPF0113 Pre-PUA domain LTnewLM_33 Pfam protein_match 541128 541364 . + . Parent=LTnewLM_330020900.1:pep;Name=PF03657;signature_desc=UPF0113 PUA domain ### LTnewLM_33 AUGUSTUS gene 541868 542359 1 + . ID=LTnewLM_330021000 LTnewLM_33 AUGUSTUS mRNA 541868 542359 1 + . ID=LTnewLM_330021000.1;Parent=LTnewLM_330021000 LTnewLM_33 AUGUSTUS CDS 541868 542359 1 + 0 ID=LTnewLM_330021000.1:CDS:1;Parent=LTnewLM_330021000.1 ### LTnewLM_33 . polypeptide 541868 542359 . + . ID=LTnewLM_330021000.1:pep;Derives_from=LTnewLM_330021000.1;orthologous_to=LmjF.33.1355_mRNA;ortholog_cluster=OG0005133;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_33 Pfam protein_match 542087 542236 . + . Parent=LTnewLM_330021000.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_33 AUGUSTUS gene 546807 547352 1 + . ID=LTnewLM_330021100 LTnewLM_33 AUGUSTUS mRNA 546807 547352 1 + . ID=LTnewLM_330021100.1;Parent=LTnewLM_330021100 LTnewLM_33 AUGUSTUS CDS 546807 547352 1 + 0 ID=LTnewLM_330021100.1:CDS:1;Parent=LTnewLM_330021100.1 ### LTnewLM_33 . polypeptide 546807 547352 . + . ID=LTnewLM_330021100.1:pep;Derives_from=LTnewLM_330021100.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 547976 548578 1 + . ID=LTnewLM_330021200 LTnewLM_33 AUGUSTUS mRNA 547976 548578 1 + . ID=LTnewLM_330021200.1;Parent=LTnewLM_330021200 LTnewLM_33 AUGUSTUS CDS 547976 548578 1 + 0 ID=LTnewLM_330021200.1:CDS:1;Parent=LTnewLM_330021200.1 ### LTnewLM_33 . polypeptide 547976 548578 . + . ID=LTnewLM_330021200.1:pep;Derives_from=LTnewLM_330021200.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 549472 551163 1 + . ID=LTnewLM_330021300 LTnewLM_33 AUGUSTUS mRNA 549472 551163 1 + . ID=LTnewLM_330021300.1;Parent=LTnewLM_330021300 LTnewLM_33 AUGUSTUS CDS 549472 551163 1 + 0 ID=LTnewLM_330021300.1:CDS:1;Parent=LTnewLM_330021300.1 ### LTnewLM_33 . polypeptide 549472 551163 . + . ID=LTnewLM_330021300.1:pep;Derives_from=LTnewLM_330021300.1;orthologous_to=LmjF.33.1360_mRNA;ortholog_cluster=OG0005134;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 551808 553082 1 + . ID=LTnewLM_330021400 LTnewLM_33 AUGUSTUS mRNA 551808 553082 1 + . ID=LTnewLM_330021400.1;Parent=LTnewLM_330021400 LTnewLM_33 AUGUSTUS CDS 551808 553082 1 + 0 ID=LTnewLM_330021400.1:CDS:1;Parent=LTnewLM_330021400.1 ### LTnewLM_33 . polypeptide 551808 553082 . + . ID=LTnewLM_330021400.1:pep;Derives_from=LTnewLM_330021400.1;orthologous_to=LmjF.33.1370_mRNA;ortholog_cluster=OG0005135;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 554979 556205 1 + . ID=LTnewLM_330021500 LTnewLM_33 AUGUSTUS mRNA 554979 556205 1 + . ID=LTnewLM_330021500.1;Parent=LTnewLM_330021500 LTnewLM_33 AUGUSTUS CDS 554979 556205 1 + 0 ID=LTnewLM_330021500.1:CDS:1;Parent=LTnewLM_330021500.1 ### LTnewLM_33 . polypeptide 554979 556205 . + . ID=LTnewLM_330021500.1:pep;Derives_from=LTnewLM_330021500.1;orthologous_to=LmjF.33.1380_mRNA;ortholog_cluster=OG0005136;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_33 Pfam protein_match 555045 555905 . + . Parent=LTnewLM_330021500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 555048 555638 . + . Parent=LTnewLM_330021500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 555123 555458 . + . Parent=LTnewLM_330021500.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 ### LTnewLM_33 AUGUSTUS gene 560578 561459 1 + . ID=LTnewLM_330021600 LTnewLM_33 AUGUSTUS mRNA 560578 561459 1 + . ID=LTnewLM_330021600.1;Parent=LTnewLM_330021600 LTnewLM_33 AUGUSTUS CDS 560578 561459 1 + 0 ID=LTnewLM_330021600.1:CDS:1;Parent=LTnewLM_330021600.1 ### LTnewLM_33 . polypeptide 560578 561459 . + . ID=LTnewLM_330021600.1:pep;Derives_from=LTnewLM_330021600.1;orthologous_to=LmjF.33.1390_mRNA;ortholog_cluster=OG0005137;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 563455 569400 1 + . ID=LTnewLM_330021700 LTnewLM_33 AUGUSTUS mRNA 563455 569400 1 + . ID=LTnewLM_330021700.1;Parent=LTnewLM_330021700 LTnewLM_33 AUGUSTUS CDS 563455 569400 1 + 0 ID=LTnewLM_330021700.1:CDS:1;Parent=LTnewLM_330021700.1 ### LTnewLM_33 . polypeptide 563455 569400 . + . ID=LTnewLM_330021700.1:pep;Derives_from=LTnewLM_330021700.1;orthologous_to=LmjF.33.1400_mRNA;ortholog_cluster=OG0005138;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 565966 566286 . + . Parent=LTnewLM_330021700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 565969 566298 . + . Parent=LTnewLM_330021700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 566644 567102 . + . Parent=LTnewLM_330021700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 566668 566799 . + . Parent=LTnewLM_330021700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_33 AUGUSTUS gene 570201 571970 1 + . ID=LTnewLM_330021800 LTnewLM_33 AUGUSTUS mRNA 570201 571970 1 + . ID=LTnewLM_330021800.1;Parent=LTnewLM_330021800 LTnewLM_33 AUGUSTUS CDS 570201 571970 1 + 0 ID=LTnewLM_330021800.1:CDS:1;Parent=LTnewLM_330021800.1 ### LTnewLM_33 . polypeptide 570201 571970 . + . ID=LTnewLM_330021800.1:pep;Derives_from=LTnewLM_330021800.1;orthologous_to=LmjF.33.1410_mRNA;ortholog_cluster=OG0005139;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 571026 571121 . + . Parent=LTnewLM_330021800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 571167 571238 . + . Parent=LTnewLM_330021800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 571263 571361 . + . Parent=LTnewLM_330021800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 576442 577908 1 + . ID=LTnewLM_330021900 LTnewLM_33 AUGUSTUS mRNA 576442 577908 1 + . ID=LTnewLM_330021900.1;Parent=LTnewLM_330021900 LTnewLM_33 AUGUSTUS CDS 576442 577908 1 + 0 ID=LTnewLM_330021900.1:CDS:1;Parent=LTnewLM_330021900.1 ### LTnewLM_33 . polypeptide 576442 577908 . + . ID=LTnewLM_330021900.1:pep;Derives_from=LTnewLM_330021900.1;orthologous_to=LmjF.33.1420_mRNA;ortholog_cluster=OG0005140;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_33 Pfam protein_match 576475 577878 . + . Parent=LTnewLM_330021900.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_33 Pfam protein_match 576478 577185 . + . Parent=LTnewLM_330021900.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_33 AUGUSTUS gene 584286 586037 1 + . ID=LTnewLM_330022000 LTnewLM_33 AUGUSTUS mRNA 584286 586037 1 + . ID=LTnewLM_330022000.1;Parent=LTnewLM_330022000 LTnewLM_33 AUGUSTUS CDS 584286 586037 1 + 0 ID=LTnewLM_330022000.1:CDS:1;Parent=LTnewLM_330022000.1 ### LTnewLM_33 . polypeptide 584286 586037 . + . ID=LTnewLM_330022000.1:pep;Derives_from=LTnewLM_330022000.1;orthologous_to=LmjF.33.1430_mRNA;ortholog_cluster=OG0005141;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 591224 593251 1 + . ID=LTnewLM_330022100 LTnewLM_33 AUGUSTUS mRNA 591224 593251 1 + . ID=LTnewLM_330022100.1;Parent=LTnewLM_330022100 LTnewLM_33 AUGUSTUS CDS 591224 593251 1 + 0 ID=LTnewLM_330022100.1:CDS:1;Parent=LTnewLM_330022100.1 ### LTnewLM_33 . polypeptide 591224 593251 . + . ID=LTnewLM_330022100.1:pep;Derives_from=LTnewLM_330022100.1;orthologous_to=LmjF.33.1440_mRNA;ortholog_cluster=OG0005142;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_33 Pfam protein_match 592826 592936 . + . Parent=LTnewLM_330022100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_33 . polypeptide 599180 599506 . + . ID=LTnewLM_330022200.1:pep;Derives_from=LTnewLM_330022200.1;orthologous_to=LTnewLM_230026500.1,LTnewLM_310027500.1,LTnewLM_330022200.2;ortholog_cluster=OG0000172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 599180 599590 1.32 + . ID=LTnewLM_330022200 LTnewLM_33 AUGUSTUS mRNA 599180 599506 0.95 + . ID=LTnewLM_330022200.1;Parent=LTnewLM_330022200 LTnewLM_33 AUGUSTUS CDS 599180 599506 0.95 + 0 ID=LTnewLM_330022200.1:CDS:1;Parent=LTnewLM_330022200.1 LTnewLM_33 AUGUSTUS mRNA 599180 599590 0.37 + . ID=LTnewLM_330022200.2;Parent=LTnewLM_330022200 LTnewLM_33 AUGUSTUS CDS 599180 599462 0.59 + 0 ID=LTnewLM_330022200.2:CDS:1;Parent=LTnewLM_330022200.2 LTnewLM_33 AUGUSTUS CDS 599577 599590 0.37 + 2 ID=LTnewLM_330022200.2:CDS:2;Parent=LTnewLM_330022200.2 ### LTnewLM_33 . polypeptide 599180 599590 . + . ID=LTnewLM_330022200.2:pep;Derives_from=LTnewLM_330022200.2;orthologous_to=LTnewLM_230026500.1,LTnewLM_310027500.1,LTnewLM_330022200.1;ortholog_cluster=OG0000172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 600253 600882 1 + . ID=LTnewLM_330022300 LTnewLM_33 AUGUSTUS mRNA 600253 600882 1 + . ID=LTnewLM_330022300.1;Parent=LTnewLM_330022300 LTnewLM_33 AUGUSTUS CDS 600253 600882 1 + 0 ID=LTnewLM_330022300.1:CDS:1;Parent=LTnewLM_330022300.1 ### LTnewLM_33 . polypeptide 600253 600882 . + . ID=LTnewLM_330022300.1:pep;Derives_from=LTnewLM_330022300.1;orthologous_to=LmjF.33.1450_mRNA;ortholog_cluster=OG0005143;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_33 Pfam protein_match 600478 600597 . + . Parent=LTnewLM_330022300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_33 AUGUSTUS gene 619748 620731 1 + . ID=LTnewLM_330022400 LTnewLM_33 AUGUSTUS mRNA 619748 620731 1 + . ID=LTnewLM_330022400.1;Parent=LTnewLM_330022400 LTnewLM_33 AUGUSTUS CDS 619748 620731 1 + 0 ID=LTnewLM_330022400.1:CDS:1;Parent=LTnewLM_330022400.1 ### LTnewLM_33 . polypeptide 619748 620731 . + . ID=LTnewLM_330022400.1:pep;Derives_from=LTnewLM_330022400.1;orthologous_to=LmjF.33.1460_mRNA;ortholog_cluster=OG0005144;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_33 Pfam protein_match 619757 619939 . + . Parent=LTnewLM_330022400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_33 AUGUSTUS gene 641688 642074 1 + . ID=LTnewLM_330022500 LTnewLM_33 AUGUSTUS mRNA 641688 642074 1 + . ID=LTnewLM_330022500.1;Parent=LTnewLM_330022500 LTnewLM_33 AUGUSTUS CDS 641688 642074 1 + 0 ID=LTnewLM_330022500.1:CDS:1;Parent=LTnewLM_330022500.1 ### LTnewLM_33 . polypeptide 641688 642074 . + . ID=LTnewLM_330022500.1:pep;Derives_from=LTnewLM_330022500.1;orthologous_to=LmjF.33.1470_mRNA;ortholog_cluster=OG0005145;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_33 Pfam protein_match 641745 641945 . + . Parent=LTnewLM_330022500.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_33 AUGUSTUS gene 649979 660295 1 + . ID=LTnewLM_330022600 LTnewLM_33 AUGUSTUS mRNA 649979 660295 1 + . ID=LTnewLM_330022600.1;Parent=LTnewLM_330022600 LTnewLM_33 AUGUSTUS CDS 649979 652349 1 + 0 ID=LTnewLM_330022600.1:CDS:1;Parent=LTnewLM_330022600.1 LTnewLM_33 AUGUSTUS CDS 652443 660295 1 + 2 ID=LTnewLM_330022600.1:CDS:2;Parent=LTnewLM_330022600.1 ### LTnewLM_33 . polypeptide 649979 660295 . + . ID=LTnewLM_330022600.1:pep;Derives_from=LTnewLM_330022600.1;orthologous_to=LmjF.33.1490_mRNA;ortholog_cluster=OG0005146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 662348 664906 1 + . ID=LTnewLM_330022700 LTnewLM_33 AUGUSTUS mRNA 662348 664906 1 + . ID=LTnewLM_330022700.1;Parent=LTnewLM_330022700 LTnewLM_33 AUGUSTUS CDS 662348 664906 1 + 0 ID=LTnewLM_330022700.1:CDS:1;Parent=LTnewLM_330022700.1 ### LTnewLM_33 . polypeptide 662348 664906 . + . ID=LTnewLM_330022700.1:pep;Derives_from=LTnewLM_330022700.1;orthologous_to=LmjF.33.1500_mRNA;ortholog_cluster=OG0005147;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 666436 668334 1 + . ID=LTnewLM_330022800 LTnewLM_33 AUGUSTUS mRNA 666436 668334 1 + . ID=LTnewLM_330022800.1;Parent=LTnewLM_330022800 LTnewLM_33 AUGUSTUS CDS 666436 668334 1 + 0 ID=LTnewLM_330022800.1:CDS:1;Parent=LTnewLM_330022800.1 ### LTnewLM_33 . polypeptide 666436 668334 . + . ID=LTnewLM_330022800.1:pep;Derives_from=LTnewLM_330022800.1;orthologous_to=LmjF.33.1510_mRNA;ortholog_cluster=OG0005148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 669128 670303 1 + . ID=LTnewLM_330022900 LTnewLM_33 AUGUSTUS mRNA 669128 670303 1 + . ID=LTnewLM_330022900.1;Parent=LTnewLM_330022900 LTnewLM_33 AUGUSTUS CDS 669128 670303 1 + 0 ID=LTnewLM_330022900.1:CDS:1;Parent=LTnewLM_330022900.1 ### LTnewLM_33 . polypeptide 669128 670303 . + . ID=LTnewLM_330022900.1:pep;Derives_from=LTnewLM_330022900.1;orthologous_to=LmjF.33.1520_mRNA;ortholog_cluster=OG0005149;product=term%3DPRA1 family protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03208 LTnewLM_33 Pfam protein_match 669707 670105 . + . Parent=LTnewLM_330022900.1:pep;Name=PF03208;signature_desc=PRA1 family protein ### LTnewLM_33 AUGUSTUS gene 672721 673437 1 + . ID=LTnewLM_330023000 LTnewLM_33 AUGUSTUS mRNA 672721 673437 1 + . ID=LTnewLM_330023000.1;Parent=LTnewLM_330023000 LTnewLM_33 AUGUSTUS CDS 672721 673437 1 + 0 ID=LTnewLM_330023000.1:CDS:1;Parent=LTnewLM_330023000.1 ### LTnewLM_33 . polypeptide 672721 673437 . + . ID=LTnewLM_330023000.1:pep;Derives_from=LTnewLM_330023000.1;orthologous_to=LmjF.33.1530_mRNA;ortholog_cluster=OG0005150;product=term%3DPRA1 family protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03208 LTnewLM_33 Pfam protein_match 672964 673407 . + . Parent=LTnewLM_330023000.1:pep;Name=PF03208;signature_desc=PRA1 family protein ### LTnewLM_33 . pseudogene 674544 675111 . + . ID=LTnewLM_330023100:pseudogene;coverage=0.984;sequence_ID=0.890;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.1535_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 674544 675111 . + . ID=LTnewLM_330023100.1;Parent=LTnewLM_330023100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 674544 675111 . + . ID=LTnewLM_330023100.1:pseudogenic_exon:1;Parent=LTnewLM_330023100.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 674544 675111 . + . ID=LTnewLM_330023100.1:pep;Derives_from=LTnewLM_330023100.1;product=term%3Dhypothetical protein ### LTnewLM_33 Liftoff gene 675512 676500 . + . ID=LTnewLM_330023200;coverage=0.973;sequence_ID=0.922;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.33.1540_0 LTnewLM_33 Liftoff mRNA 675512 676500 . + . ID=LTnewLM_330023200.1;Parent=LTnewLM_330023200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff five_prime_UTR 675512 675837 . + . ID=LTnewLM_330023200:five_prime_UTR;Parent=LTnewLM_330023200.1;extra_copy_number=0 LTnewLM_33 Liftoff CDS 675838 676500 . + 0 ID=LTnewLM_330023200.1:CDS:1;Parent=LTnewLM_330023200.1;extra_copy_number=0 LTnewLM_33 Liftoff mRNA 675859 676500 . + . ID=LTnewLM_330023200.2;Parent=LTnewLM_330023200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff five_prime_UTR 675859 676074 . + . ID=LTnewLM_330023200:five_prime_UTR.1;Parent=LTnewLM_330023200.2;extra_copy_number=0 LTnewLM_33 Liftoff CDS 676075 676500 . + 0 ID=LTnewLM_330023200.2:CDS:1;Parent=LTnewLM_330023200.2;extra_copy_number=0 ### LTnewLM_33 . polypeptide 675838 676500 . + . ID=LTnewLM_330023200.1:pep;Derives_from=LTnewLM_330023200.1;orthologous_to=LmjF.33.1540.2_mRNA;ortholog_cluster=OG0005151;product=term%3DGlutathione S-transferase%2C N-terminal domain/Glutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02798|Pfam:PF00043|Pfam:PF14497|Pfam:PF13410;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 675859 676071 . + . Parent=LTnewLM_330023200.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 676165 676440 . + . Parent=LTnewLM_330023200.1:pep;Name=PF00043;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 676183 676452 . + . Parent=LTnewLM_330023200.1:pep;Name=PF14497;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 676234 676419 . + . Parent=LTnewLM_330023200.1:pep;Name=PF13410;signature_desc=Glutathione S-transferase%2C C-terminal domain ### LTnewLM_33 . polypeptide 676075 676500 . + . ID=LTnewLM_330023200.2:pep;Derives_from=LTnewLM_330023200.2;orthologous_to=LmjF.33.1540.1_mRNA;ortholog_cluster=OG0005152;product=term%3DGlutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00043|Pfam:PF14497|Pfam:PF13410 LTnewLM_33 Pfam protein_match 676165 676440 . + . Parent=LTnewLM_330023200.2:pep;Name=PF00043;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 676183 676452 . + . Parent=LTnewLM_330023200.2:pep;Name=PF14497;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_33 Pfam protein_match 676234 676419 . + . Parent=LTnewLM_330023200.2:pep;Name=PF13410;signature_desc=Glutathione S-transferase%2C C-terminal domain ### LTnewLM_33 AUGUSTUS gene 677813 678796 1 + . ID=LTnewLM_330023300 LTnewLM_33 AUGUSTUS mRNA 677813 678796 1 + . ID=LTnewLM_330023300.1;Parent=LTnewLM_330023300 LTnewLM_33 AUGUSTUS CDS 677813 678796 1 + 0 ID=LTnewLM_330023300.1:CDS:1;Parent=LTnewLM_330023300.1 ### LTnewLM_33 . polypeptide 677813 678796 . + . ID=LTnewLM_330023300.1:pep;Derives_from=LTnewLM_330023300.1;orthologous_to=LmjF.33.1550_mRNA;ortholog_cluster=OG0005153;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 680264 682276 1 + . ID=LTnewLM_330023400 LTnewLM_33 AUGUSTUS mRNA 680264 682276 1 + . ID=LTnewLM_330023400.1;Parent=LTnewLM_330023400 LTnewLM_33 AUGUSTUS CDS 680264 682276 1 + 0 ID=LTnewLM_330023400.1:CDS:1;Parent=LTnewLM_330023400.1 ### LTnewLM_33 . polypeptide 680264 682276 . + . ID=LTnewLM_330023400.1:pep;Derives_from=LTnewLM_330023400.1;orthologous_to=LmjF.33.1560_mRNA;ortholog_cluster=OG0005154;product=term%3DSulfite exporter TauE/SafE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01925;Ontology_term=GO:0016021 LTnewLM_33 Pfam protein_match 681203 681559 . + . Parent=LTnewLM_330023400.1:pep;Name=PF01925;signature_desc=Sulfite exporter TauE/SafE;Ontology_term=GO:0016021 ### LTnewLM_33 AUGUSTUS gene 683577 684368 1 + . ID=LTnewLM_330023500 LTnewLM_33 AUGUSTUS mRNA 683577 684368 1 + . ID=LTnewLM_330023500.1;Parent=LTnewLM_330023500 LTnewLM_33 AUGUSTUS CDS 683577 684368 1 + 0 ID=LTnewLM_330023500.1:CDS:1;Parent=LTnewLM_330023500.1 ### LTnewLM_33 . polypeptide 683577 684368 . + . ID=LTnewLM_330023500.1:pep;Derives_from=LTnewLM_330023500.1;orthologous_to=LmjF.33.1570_mRNA;ortholog_cluster=OG0005155;product=term%3DRibulose-phosphate 3 epimerase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00834;Ontology_term=GO:0016857,GO:0005975 LTnewLM_33 Pfam protein_match 683664 684260 . + . Parent=LTnewLM_330023500.1:pep;Name=PF00834;signature_desc=Ribulose-phosphate 3 epimerase family;Ontology_term=GO:0016857,GO:0005975 ### LTnewLM_33 AUGUSTUS gene 686092 687630 1 + . ID=LTnewLM_330023600 LTnewLM_33 AUGUSTUS mRNA 686092 687630 1 + . ID=LTnewLM_330023600.1;Parent=LTnewLM_330023600 LTnewLM_33 AUGUSTUS CDS 686092 687630 1 + 0 ID=LTnewLM_330023600.1:CDS:1;Parent=LTnewLM_330023600.1 ### LTnewLM_33 . polypeptide 686092 687630 . + . ID=LTnewLM_330023600.1:pep;Derives_from=LTnewLM_330023600.1;orthologous_to=LmjF.33.1575_mRNA;ortholog_cluster=OG0005156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 688418 690208 1 + . ID=LTnewLM_330023700 LTnewLM_33 AUGUSTUS mRNA 688418 690208 1 + . ID=LTnewLM_330023700.1;Parent=LTnewLM_330023700 LTnewLM_33 AUGUSTUS CDS 688418 690208 1 + 0 ID=LTnewLM_330023700.1:CDS:1;Parent=LTnewLM_330023700.1 ### LTnewLM_33 . polypeptide 688418 690208 . + . ID=LTnewLM_330023700.1:pep;Derives_from=LTnewLM_330023700.1;orthologous_to=LmjF.33.1580_mRNA;ortholog_cluster=OG0005157;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 691359 692339 1 + . ID=LTnewLM_330023800 LTnewLM_33 AUGUSTUS mRNA 691359 692339 1 + . ID=LTnewLM_330023800.1;Parent=LTnewLM_330023800 LTnewLM_33 AUGUSTUS CDS 691359 692339 1 + 0 ID=LTnewLM_330023800.1:CDS:1;Parent=LTnewLM_330023800.1 ### LTnewLM_33 . polypeptide 691359 692339 . + . ID=LTnewLM_330023800.1:pep;Derives_from=LTnewLM_330023800.1;orthologous_to=LmjF.33.1590_mRNA;ortholog_cluster=OG0005158;product=term%3DKR domain/short chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08659|Pfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_33 Pfam protein_match 691518 692015 . + . Parent=LTnewLM_330023800.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_33 Pfam protein_match 691518 692084 . + . Parent=LTnewLM_330023800.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_33 Pfam protein_match 691527 692087 . + . Parent=LTnewLM_330023800.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_33 AUGUSTUS gene 693286 695988 1 + . ID=LTnewLM_330023900 LTnewLM_33 AUGUSTUS mRNA 693286 695988 1 + . ID=LTnewLM_330023900.1;Parent=LTnewLM_330023900 LTnewLM_33 AUGUSTUS CDS 693286 695988 1 + 0 ID=LTnewLM_330023900.1:CDS:1;Parent=LTnewLM_330023900.1 ### LTnewLM_33 . polypeptide 693286 695988 . + . ID=LTnewLM_330023900.1:pep;Derives_from=LTnewLM_330023900.1;orthologous_to=LmjF.33.1600_mRNA;ortholog_cluster=OG0005159;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 696451 697878 2e+03 + . ID=LTnewLM_330024000:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.31.2020:mRNA 103 577;original_prot_length=577 LTnewLM_33 . pseudogenic_transcript 696451 697878 . + . ID=LTnewLM_330024000.1;Parent=LTnewLM_330024000:pseudogene LTnewLM_33 . pseudogenic_exon 696451 697878 . + . ID=LTnewLM_330024000.1:pseudogenic_exon:1;Parent=LTnewLM_330024000.1 ### LTnewLM_33 . polypeptide 696451 697878 . + . ID=LTnewLM_330024000.1:pep;Derives_from=LTnewLM_330024000.1;orthologous_to=LmjF.33.1610_mRNA;ortholog_cluster=OG0007633;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_33 Pfam protein_match 696745 697806 . + . Parent=LTnewLM_330024000.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_33 Pfam protein_match 697081 697542 . + . Parent=LTnewLM_330024000.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_33 AUGUSTUS gene 701331 701555 1 + . ID=LTnewLM_330024100 LTnewLM_33 AUGUSTUS mRNA 701331 701555 1 + . ID=LTnewLM_330024100.1;Parent=LTnewLM_330024100 LTnewLM_33 AUGUSTUS CDS 701331 701555 1 + 0 ID=LTnewLM_330024100.1:CDS:1;Parent=LTnewLM_330024100.1 ### LTnewLM_33 . polypeptide 701331 701555 . + . ID=LTnewLM_330024100.1:pep;Derives_from=LTnewLM_330024100.1;orthologous_to=LTnewLM_330025400.1;ortholog_cluster=OG0005160;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 702458 703585 654 + . ID=LTnewLM_330024200:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.32.2640.1:mRNA 70 446;original_prot_length=463 LTnewLM_33 . pseudogenic_transcript 702458 703585 . + . ID=LTnewLM_330024200.1;Parent=LTnewLM_330024200:pseudogene LTnewLM_33 . pseudogenic_exon 702458 702532 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:1;Parent=LTnewLM_330024200.1 LTnewLM_33 . pseudogenic_exon 702535 702924 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:2;Parent=LTnewLM_330024200.1 LTnewLM_33 . pseudogenic_exon 702927 703025 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:3;Parent=LTnewLM_330024200.1 LTnewLM_33 . pseudogenic_exon 703028 703312 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:4;Parent=LTnewLM_330024200.1 LTnewLM_33 . pseudogenic_exon 703315 703515 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:5;Parent=LTnewLM_330024200.1 LTnewLM_33 . pseudogenic_exon 703517 703585 . + . ID=LTnewLM_330024200.1:pseudogenic_exon:6;Parent=LTnewLM_330024200.1 ### LTnewLM_33 . polypeptide 702458 703585 . + . ID=LTnewLM_330024200.1:pep;Derives_from=LTnewLM_330024200.1;orthologous_to=LTnewLM_320033400.1,LTnewLM_320033400.2,LmjF.32.2640.1_mRNA,LmjF.32.2640.2_mRNA;ortholog_cluster=OG0000098;product=term%3DCys/Met metabolism PLP-dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01053;Ontology_term=GO:0030170 LTnewLM_33 Pfam protein_match 702512 703468 . + . Parent=LTnewLM_330024200.1:pep;Name=PF01053;signature_desc=Cys/Met metabolism PLP-dependent enzyme;Ontology_term=GO:0030170 ### LTnewLM_33 AUGUSTUS gene 704164 706881 1 + . ID=LTnewLM_330024300 LTnewLM_33 AUGUSTUS mRNA 704164 706881 1 + . ID=LTnewLM_330024300.1;Parent=LTnewLM_330024300 LTnewLM_33 AUGUSTUS CDS 704164 706881 1 + 0 ID=LTnewLM_330024300.1:CDS:1;Parent=LTnewLM_330024300.1 ### LTnewLM_33 . polypeptide 704164 706881 . + . ID=LTnewLM_330024300.1:pep;Derives_from=LTnewLM_330024300.1;orthologous_to=LmjF.33.1620_mRNA;ortholog_cluster=OG0005161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 707848 708438 1 + . ID=LTnewLM_330024400 LTnewLM_33 AUGUSTUS mRNA 707848 708438 1 + . ID=LTnewLM_330024400.1;Parent=LTnewLM_330024400 LTnewLM_33 AUGUSTUS CDS 707848 708438 1 + 0 ID=LTnewLM_330024400.1:CDS:1;Parent=LTnewLM_330024400.1 ### LTnewLM_33 . polypeptide 707848 708438 . + . ID=LTnewLM_330024400.1:pep;Derives_from=LTnewLM_330024400.1;orthologous_to=LmjF.33.1630_mRNA;ortholog_cluster=OG0005162;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_33 Pfam protein_match 707926 708417 . + . Parent=LTnewLM_330024400.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_33 AUGUSTUS gene 708885 709256 1 + . ID=LTnewLM_330024500 LTnewLM_33 AUGUSTUS mRNA 708885 709256 1 + . ID=LTnewLM_330024500.1;Parent=LTnewLM_330024500 LTnewLM_33 AUGUSTUS CDS 708885 709256 1 + 0 ID=LTnewLM_330024500.1:CDS:1;Parent=LTnewLM_330024500.1 ### LTnewLM_33 . polypeptide 708885 709256 . + . ID=LTnewLM_330024500.1:pep;Derives_from=LTnewLM_330024500.1;orthologous_to=LmjF.33.1640_mRNA;ortholog_cluster=OG0005163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 709593 710390 1 + . ID=LTnewLM_330024600 LTnewLM_33 AUGUSTUS mRNA 709593 710390 1 + . ID=LTnewLM_330024600.1;Parent=LTnewLM_330024600 LTnewLM_33 AUGUSTUS CDS 709593 710390 1 + 0 ID=LTnewLM_330024600.1:CDS:1;Parent=LTnewLM_330024600.1 ### LTnewLM_33 . polypeptide 709593 710390 . + . ID=LTnewLM_330024600.1:pep;Derives_from=LTnewLM_330024600.1;orthologous_to=LmjF.33.1650_mRNA;ortholog_cluster=OG0005164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 710740 711354 1 + . ID=LTnewLM_330024700 LTnewLM_33 AUGUSTUS mRNA 710740 711354 1 + . ID=LTnewLM_330024700.1;Parent=LTnewLM_330024700 LTnewLM_33 AUGUSTUS CDS 710740 711354 1 + 0 ID=LTnewLM_330024700.1:CDS:1;Parent=LTnewLM_330024700.1 ### LTnewLM_33 . polypeptide 710740 711354 . + . ID=LTnewLM_330024700.1:pep;Derives_from=LTnewLM_330024700.1;orthologous_to=LmjF.33.1660_mRNA;ortholog_cluster=OG0005165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 711751 713115 1 + . ID=LTnewLM_330024800 LTnewLM_33 AUGUSTUS mRNA 711751 713115 1 + . ID=LTnewLM_330024800.1;Parent=LTnewLM_330024800 LTnewLM_33 AUGUSTUS CDS 711751 713115 1 + 0 ID=LTnewLM_330024800.1:CDS:1;Parent=LTnewLM_330024800.1 ### LTnewLM_33 . polypeptide 711751 713115 . + . ID=LTnewLM_330024800.1:pep;Derives_from=LTnewLM_330024800.1;orthologous_to=LmjF.33.1670_mRNA;ortholog_cluster=OG0005166;product=term%3DGlycosyltransferase Family 4/Glycosyl transferase 4-like domain/PIGA (GPI anchor biosynthesis)/Glycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13439|Pfam:PF13579|Pfam:PF08288|Pfam:PF00534|Pfam:PF13692;Ontology_term=GO:0009058,GO:0006506 LTnewLM_33 Pfam protein_match 711799 712308 . + . Parent=LTnewLM_330024800.1:pep;Name=PF13439;signature_desc=Glycosyltransferase Family 4 LTnewLM_33 Pfam protein_match 711802 712293 . + . Parent=LTnewLM_330024800.1:pep;Name=PF13579;signature_desc=Glycosyl transferase 4-like domain LTnewLM_33 Pfam protein_match 711880 712152 . + . Parent=LTnewLM_330024800.1:pep;Name=PF08288;signature_desc=PIGA (GPI anchor biosynthesis);Ontology_term=GO:0006506 LTnewLM_33 Pfam protein_match 712348 712794 . + . Parent=LTnewLM_330024800.1:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_33 Pfam protein_match 712378 712791 . + . Parent=LTnewLM_330024800.1:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_33 AUGUSTUS gene 713664 716051 1 + . ID=LTnewLM_330024900 LTnewLM_33 AUGUSTUS mRNA 713664 716051 1 + . ID=LTnewLM_330024900.1;Parent=LTnewLM_330024900 LTnewLM_33 AUGUSTUS CDS 713664 716051 1 + 0 ID=LTnewLM_330024900.1:CDS:1;Parent=LTnewLM_330024900.1 ### LTnewLM_33 . polypeptide 713664 716051 . + . ID=LTnewLM_330024900.1:pep;Derives_from=LTnewLM_330024900.1;orthologous_to=LmjF.33.1680_mRNA;ortholog_cluster=OG0005167;product=term%3DtRNA methyl transferase HUP domain/Thiamine biosynthesis protein (ThiI)/Aminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03054|Pfam:PF02568|Pfam:PF00266;Ontology_term=GO:0008033,GO:0008152,GO:0004810,GO:0016740 LTnewLM_33 Pfam protein_match 714333 714464 . + . Parent=LTnewLM_330024900.1:pep;Name=PF03054;signature_desc=tRNA methyl transferase HUP domain;Ontology_term=GO:0016740,GO:0008033 LTnewLM_33 Pfam protein_match 714333 714842 . + . Parent=LTnewLM_330024900.1:pep;Name=PF02568;signature_desc=Thiamine biosynthesis protein (ThiI);Ontology_term=GO:0004810 LTnewLM_33 Pfam protein_match 715071 715298 . + . Parent=LTnewLM_330024900.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 LTnewLM_33 Pfam protein_match 715434 715997 . + . Parent=LTnewLM_330024900.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_33 AUGUSTUS gene 718625 718987 1 + . ID=LTnewLM_330025000 LTnewLM_33 AUGUSTUS mRNA 718625 718987 1 + . ID=LTnewLM_330025000.1;Parent=LTnewLM_330025000 LTnewLM_33 AUGUSTUS CDS 718625 718987 1 + 0 ID=LTnewLM_330025000.1:CDS:1;Parent=LTnewLM_330025000.1 ### LTnewLM_33 . polypeptide 718625 718987 . + . ID=LTnewLM_330025000.1:pep;Derives_from=LTnewLM_330025000.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 719502 722600 1 + . ID=LTnewLM_330025100 LTnewLM_33 AUGUSTUS mRNA 719502 722600 1 + . ID=LTnewLM_330025100.1;Parent=LTnewLM_330025100 LTnewLM_33 AUGUSTUS CDS 719502 722600 1 + 0 ID=LTnewLM_330025100.1:CDS:1;Parent=LTnewLM_330025100.1 ### LTnewLM_33 . polypeptide 719502 722600 . + . ID=LTnewLM_330025100.1:pep;Derives_from=LTnewLM_330025100.1;orthologous_to=LmjF.33.1690_mRNA;ortholog_cluster=OG0005168;product=term%3DDNA polymerase family B%2C exonuclease domain/DNA polymerase family B/C4-type zinc-finger of DNA polymerase delta%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03104|Pfam:PF00136|Pfam:PF14260;Ontology_term=GO:0000166,GO:0003677,GO:0008408 LTnewLM_33 Pfam protein_match 719682 720716 . + . Parent=LTnewLM_330025100.1:pep;Name=PF03104;signature_desc=DNA polymerase family B%2C exonuclease domain;Ontology_term=GO:0008408 LTnewLM_33 Pfam protein_match 720915 722198 . + . Parent=LTnewLM_330025100.1:pep;Name=PF00136;signature_desc=DNA polymerase family B;Ontology_term=GO:0000166,GO:0003677 LTnewLM_33 Pfam protein_match 722319 722525 . + . Parent=LTnewLM_330025100.1:pep;Name=PF14260;signature_desc=C4-type zinc-finger of DNA polymerase delta ### LTnewLM_33 AUGUSTUS gene 724278 727589 1 + . ID=LTnewLM_330025200 LTnewLM_33 AUGUSTUS mRNA 724278 727589 1 + . ID=LTnewLM_330025200.1;Parent=LTnewLM_330025200 LTnewLM_33 AUGUSTUS CDS 724278 727589 1 + 0 ID=LTnewLM_330025200.1:CDS:1;Parent=LTnewLM_330025200.1 ### LTnewLM_33 . polypeptide 724278 727589 . + . ID=LTnewLM_330025200.1:pep;Derives_from=LTnewLM_330025200.1;orthologous_to=LTnewLM_230018000.1,LmjF.30.1300_mRNA,LmjF.33.1700_mRNA;ortholog_cluster=OG0000170;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain/HAND/SLIDE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271|Pfam:PF09110|Pfam:PF09111;Ontology_term=GO:0043044,GO:0031491,GO:0016787,GO:0006338,GO:0016818,GO:0005524,GO:0005634,GO:0003676,GO:0003677 LTnewLM_33 Pfam protein_match 724770 725258 . + . Parent=LTnewLM_330025200.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_33 Pfam protein_match 724827 725624 . + . Parent=LTnewLM_330025200.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_33 Pfam protein_match 725715 726038 . + . Parent=LTnewLM_330025200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_33 Pfam protein_match 726744 727028 . + . Parent=LTnewLM_330025200.1:pep;Name=PF09110;signature_desc=HAND;Ontology_term=GO:0031491,GO:0043044 LTnewLM_33 Pfam protein_match 727224 727520 . + . Parent=LTnewLM_330025200.1:pep;Name=PF09111;signature_desc=SLIDE;Ontology_term=GO:0003676,GO:0005524,GO:0016818,GO:0006338,GO:0005634 ### LTnewLM_33 AUGUSTUS gene 730853 732775 1 + . ID=LTnewLM_330025300 LTnewLM_33 AUGUSTUS mRNA 730853 732775 1 + . ID=LTnewLM_330025300.1;Parent=LTnewLM_330025300 LTnewLM_33 AUGUSTUS CDS 730853 732775 1 + 0 ID=LTnewLM_330025300.1:CDS:1;Parent=LTnewLM_330025300.1 ### LTnewLM_33 . polypeptide 730853 732775 . + . ID=LTnewLM_330025300.1:pep;Derives_from=LTnewLM_330025300.1;orthologous_to=LmjF.33.1710_mRNA;ortholog_cluster=OG0005169;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/RIO1 family/Kinase-like/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF01163|Pfam:PF14531|Pfam:PF13499|Pfam:PF13833;Ontology_term=GO:0004672,GO:0003824,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 730946 731710 . + . Parent=LTnewLM_330025300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 730955 731722 . + . Parent=LTnewLM_330025300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 731057 731371 . + . Parent=LTnewLM_330025300.1:pep;Name=PF01163;signature_desc=RIO1 family;Ontology_term=GO:0003824,GO:0005524 LTnewLM_33 Pfam protein_match 731102 731665 . + . Parent=LTnewLM_330025300.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_33 Pfam protein_match 731885 732064 . + . Parent=LTnewLM_330025300.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_33 Pfam protein_match 731927 732067 . + . Parent=LTnewLM_330025300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_33 Pfam protein_match 732203 732337 . + . Parent=LTnewLM_330025300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair ### LTnewLM_33 AUGUSTUS gene 733159 733470 1 + . ID=LTnewLM_330025400 LTnewLM_33 AUGUSTUS mRNA 733159 733470 1 + . ID=LTnewLM_330025400.1;Parent=LTnewLM_330025400 LTnewLM_33 AUGUSTUS CDS 733159 733470 1 + 0 ID=LTnewLM_330025400.1:CDS:1;Parent=LTnewLM_330025400.1 ### LTnewLM_33 . polypeptide 733159 733470 . + . ID=LTnewLM_330025400.1:pep;Derives_from=LTnewLM_330025400.1;orthologous_to=LTnewLM_330024100.1;ortholog_cluster=OG0005160;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 735393 736619 1 + . ID=LTnewLM_330025500 LTnewLM_33 AUGUSTUS mRNA 735393 736619 1 + . ID=LTnewLM_330025500.1;Parent=LTnewLM_330025500 LTnewLM_33 AUGUSTUS CDS 735393 736619 1 + 0 ID=LTnewLM_330025500.1:CDS:1;Parent=LTnewLM_330025500.1 ### LTnewLM_33 . polypeptide 735393 736619 . + . ID=LTnewLM_330025500.1:pep;Derives_from=LTnewLM_330025500.1;orthologous_to=LmjF.33.1720_mRNA;ortholog_cluster=OG0005170;product=term%3DAnaphase-promoting complex subunit 5/Tetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12862|Pfam:PF13424 LTnewLM_33 Pfam protein_match 735924 736037 . + . Parent=LTnewLM_330025500.1:pep;Name=PF12862;signature_desc=Anaphase-promoting complex subunit 5 LTnewLM_33 Pfam protein_match 736134 736259 . + . Parent=LTnewLM_330025500.1:pep;Name=PF12862;signature_desc=Anaphase-promoting complex subunit 5 LTnewLM_33 Pfam protein_match 736254 736454 . + . Parent=LTnewLM_330025500.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat ### LTnewLM_33 AUGUSTUS gene 737810 740458 1 + . ID=LTnewLM_330025600 LTnewLM_33 AUGUSTUS mRNA 737810 740458 1 + . ID=LTnewLM_330025600.1;Parent=LTnewLM_330025600 LTnewLM_33 AUGUSTUS CDS 737810 740458 1 + 0 ID=LTnewLM_330025600.1:CDS:1;Parent=LTnewLM_330025600.1 ### LTnewLM_33 . polypeptide 737810 740458 . + . ID=LTnewLM_330025600.1:pep;Derives_from=LTnewLM_330025600.1;orthologous_to=LmjF.33.1730_mRNA;ortholog_cluster=OG0005171;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 741047 741388 1 + . ID=LTnewLM_330025700 LTnewLM_33 AUGUSTUS mRNA 741047 741388 1 + . ID=LTnewLM_330025700.1;Parent=LTnewLM_330025700 LTnewLM_33 AUGUSTUS CDS 741047 741388 1 + 0 ID=LTnewLM_330025700.1:CDS:1;Parent=LTnewLM_330025700.1 ### LTnewLM_33 . polypeptide 741047 741388 . + . ID=LTnewLM_330025700.1:pep;Derives_from=LTnewLM_330025700.1;orthologous_to=LmjF.33.1740_mRNA;ortholog_cluster=OG0005172;product=term%3DMacrophage migration inhibitory factor (MIF)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01187 LTnewLM_33 Pfam protein_match 741122 741382 . + . Parent=LTnewLM_330025700.1:pep;Name=PF01187;signature_desc=Macrophage migration inhibitory factor (MIF) ### LTnewLM_33 AUGUSTUS gene 741810 742151 1 + . ID=LTnewLM_330025800 LTnewLM_33 AUGUSTUS mRNA 741810 742151 1 + . ID=LTnewLM_330025800.1;Parent=LTnewLM_330025800 LTnewLM_33 AUGUSTUS CDS 741810 742151 1 + 0 ID=LTnewLM_330025800.1:CDS:1;Parent=LTnewLM_330025800.1 ### LTnewLM_33 . polypeptide 741810 742151 . + . ID=LTnewLM_330025800.1:pep;Derives_from=LTnewLM_330025800.1;orthologous_to=LmjF.33.1750_mRNA;ortholog_cluster=OG0005173;product=term%3DMacrophage migration inhibitory factor (MIF)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01187 LTnewLM_33 Pfam protein_match 741897 742142 . + . Parent=LTnewLM_330025800.1:pep;Name=PF01187;signature_desc=Macrophage migration inhibitory factor (MIF) ### LTnewLM_33 . polypeptide 742590 743687 . - . ID=LTnewLM_330025900.1:pep;Derives_from=LTnewLM_330025900.1;orthologous_to=LTnewLM_330025900.2,LmjF.33.1760.1_mRNA,LmjF.33.1760.2_mRNA;ortholog_cluster=OG0000292;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 742590 743741 . - . ID=LTnewLM_330025900.2:pep;Derives_from=LTnewLM_330025900.2;orthologous_to=LTnewLM_330025900.1,LmjF.33.1760.1_mRNA,LmjF.33.1760.2_mRNA;ortholog_cluster=OG0000292;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 742590 743760 . - . ID=LTnewLM_330025900:pseudogene;coverage=1.0;sequence_ID=0.957;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.1760_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 742590 743718 . - . ID=LTnewLM_330025900.1;Parent=LTnewLM_330025900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 742590 743687 . - . ID=LTnewLM_330025900.1:pseudogenic_exon:1;Parent=LTnewLM_330025900.1;extra_copy_number=0 LTnewLM_33 . pseudogenic_transcript 742590 743760 . - . ID=LTnewLM_330025900.2;Parent=LTnewLM_330025900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 742590 743741 . - . ID=LTnewLM_330025900.2:pseudogenic_exon:1;Parent=LTnewLM_330025900.2;extra_copy_number=0 ### LTnewLM_33 AUGUSTUS gene 745239 750134 1 - . ID=LTnewLM_330026000 LTnewLM_33 AUGUSTUS mRNA 745239 750134 1 - . ID=LTnewLM_330026000.1;Parent=LTnewLM_330026000 LTnewLM_33 AUGUSTUS CDS 745239 750134 1 - 0 ID=LTnewLM_330026000.1:CDS:1;Parent=LTnewLM_330026000.1 ### LTnewLM_33 . polypeptide 745239 750134 . - . ID=LTnewLM_330026000.1:pep;Derives_from=LTnewLM_330026000.1;orthologous_to=LmjF.33.1780_mRNA;ortholog_cluster=OG0005174;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 750700 751602 0.97 - . ID=LTnewLM_330026100 LTnewLM_33 AUGUSTUS mRNA 750700 751602 0.97 - . ID=LTnewLM_330026100.1;Parent=LTnewLM_330026100 LTnewLM_33 AUGUSTUS CDS 750700 751602 0.97 - 0 ID=LTnewLM_330026100.1:CDS:1;Parent=LTnewLM_330026100.1 ### LTnewLM_33 . polypeptide 750700 751602 . - . ID=LTnewLM_330026100.1:pep;Derives_from=LTnewLM_330026100.1;orthologous_to=LmjF.33.1790_mRNA;ortholog_cluster=OG0005175;product=term%3DHistone methylation protein DOT1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08123;Ontology_term=GO:0018024 LTnewLM_33 Pfam protein_match 750796 751167 . - . Parent=LTnewLM_330026100.1:pep;Name=PF08123;signature_desc=Histone methylation protein DOT1;Ontology_term=GO:0018024 ### LTnewLM_33 AUGUSTUS gene 752610 753257 1 + . ID=LTnewLM_330026200 LTnewLM_33 AUGUSTUS mRNA 752610 753257 1 + . ID=LTnewLM_330026200.1;Parent=LTnewLM_330026200 LTnewLM_33 AUGUSTUS CDS 752610 753257 1 + 0 ID=LTnewLM_330026200.1:CDS:1;Parent=LTnewLM_330026200.1 ### LTnewLM_33 . polypeptide 752610 753257 . + . ID=LTnewLM_330026200.1:pep;Derives_from=LTnewLM_330026200.1;orthologous_to=LmjF.33.1800_mRNA;ortholog_cluster=OG0005176;product=term%3DDer1-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04511 LTnewLM_33 Pfam protein_match 752649 753179 . + . Parent=LTnewLM_330026200.1:pep;Name=PF04511;signature_desc=Der1-like family ### LTnewLM_33 AUGUSTUS gene 753553 754719 1 + . ID=LTnewLM_330026300 LTnewLM_33 AUGUSTUS mRNA 753553 754719 1 + . ID=LTnewLM_330026300.1;Parent=LTnewLM_330026300 LTnewLM_33 AUGUSTUS CDS 753553 754719 1 + 0 ID=LTnewLM_330026300.1:CDS:1;Parent=LTnewLM_330026300.1 ### LTnewLM_33 . polypeptide 753553 754719 . + . ID=LTnewLM_330026300.1:pep;Derives_from=LTnewLM_330026300.1;orthologous_to=LmjF.33.1810_mRNA;ortholog_cluster=OG0005177;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 Liftoff gene 755032 756334 . + . ID=LTnewLM_330026400;coverage=1.0;sequence_ID=0.945;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.33.1820_0 LTnewLM_33 Liftoff mRNA 755032 756334 . + . ID=LTnewLM_330026400.1;Parent=LTnewLM_330026400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff five_prime_UTR 755032 755041 . + . ID=LTnewLM_330026400:five_prime_UTR;Parent=LTnewLM_330026400.1;extra_copy_number=0 LTnewLM_33 Liftoff CDS 755042 756334 . + 0 ID=LTnewLM_330026400.1:CDS:1;Parent=LTnewLM_330026400.1;extra_copy_number=0 LTnewLM_33 Liftoff mRNA 755057 756334 . + . ID=LTnewLM_330026400.2;Parent=LTnewLM_330026400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff five_prime_UTR 755057 755314 . + . ID=LTnewLM_330026400:five_prime_UTR.1;Parent=LTnewLM_330026400.2;extra_copy_number=0 LTnewLM_33 Liftoff CDS 755315 756334 . + 0 ID=LTnewLM_330026400.2:CDS:1;Parent=LTnewLM_330026400.2;extra_copy_number=0 ### LTnewLM_33 . polypeptide 755042 756334 . + . ID=LTnewLM_330026400.1:pep;Derives_from=LTnewLM_330026400.1;orthologous_to=LTnewLM_330026400.2,LmjF.33.1820.1_mRNA,LmjF.33.1820.2_mRNA;ortholog_cluster=OG0000237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 755315 756334 . + . ID=LTnewLM_330026400.2:pep;Derives_from=LTnewLM_330026400.2;orthologous_to=LTnewLM_330026400.1,LmjF.33.1820.1_mRNA,LmjF.33.1820.2_mRNA;ortholog_cluster=OG0000237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 756997 759873 1 + . ID=LTnewLM_330026500 LTnewLM_33 AUGUSTUS mRNA 756997 759873 1 + . ID=LTnewLM_330026500.1;Parent=LTnewLM_330026500 LTnewLM_33 AUGUSTUS CDS 756997 759873 1 + 0 ID=LTnewLM_330026500.1:CDS:1;Parent=LTnewLM_330026500.1 ### LTnewLM_33 . polypeptide 756997 759873 . + . ID=LTnewLM_330026500.1:pep;Derives_from=LTnewLM_330026500.1;orthologous_to=LmjF.33.1830_mRNA;ortholog_cluster=OG0005178;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_33 Pfam protein_match 757243 758139 . + . Parent=LTnewLM_330026500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 757246 757860 . + . Parent=LTnewLM_330026500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_33 AUGUSTUS gene 764455 764844 0.99 + . ID=LTnewLM_330026600 LTnewLM_33 AUGUSTUS mRNA 764455 764844 0.99 + . ID=LTnewLM_330026600.1;Parent=LTnewLM_330026600 LTnewLM_33 AUGUSTUS CDS 764455 764844 0.99 + 0 ID=LTnewLM_330026600.1:CDS:1;Parent=LTnewLM_330026600.1 ### LTnewLM_33 . polypeptide 764455 764844 . + . ID=LTnewLM_330026600.1:pep;Derives_from=LTnewLM_330026600.1;orthologous_to=LTnewLM_230023600.1,LTnewLM_290029200.1,LTnewLM_300035900.1,LTnewLM_330027000.1,LTnewLM_350026400.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 767171 767452 1 + . ID=LTnewLM_330026700 LTnewLM_33 AUGUSTUS mRNA 767171 767452 1 + . ID=LTnewLM_330026700.1;Parent=LTnewLM_330026700 LTnewLM_33 AUGUSTUS CDS 767171 767452 1 + 0 ID=LTnewLM_330026700.1:CDS:1;Parent=LTnewLM_330026700.1 ### LTnewLM_33 . polypeptide 767171 767452 . + . ID=LTnewLM_330026700.1:pep;Derives_from=LTnewLM_330026700.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 768558 769211 1 + . ID=LTnewLM_330026800 LTnewLM_33 AUGUSTUS mRNA 768558 769211 1 + . ID=LTnewLM_330026800.1;Parent=LTnewLM_330026800 LTnewLM_33 AUGUSTUS CDS 768558 769211 1 + 0 ID=LTnewLM_330026800.1:CDS:1;Parent=LTnewLM_330026800.1 ### LTnewLM_33 . polypeptide 768558 769211 . + . ID=LTnewLM_330026800.1:pep;Derives_from=LTnewLM_330026800.1;orthologous_to=LmjF.33.1840_mRNA;ortholog_cluster=OG0005179;product=term%3DADP-ribosylation factor family/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF01926|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_33 Pfam protein_match 768567 769106 . + . Parent=LTnewLM_330026800.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 768591 768890 . + . Parent=LTnewLM_330026800.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 768591 768968 . + . Parent=LTnewLM_330026800.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_33 Pfam protein_match 768591 768986 . + . Parent=LTnewLM_330026800.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_33 Pfam protein_match 768591 769115 . + . Parent=LTnewLM_330026800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_33 AUGUSTUS gene 770387 771157 1 + . ID=LTnewLM_330026900 LTnewLM_33 AUGUSTUS mRNA 770387 771157 1 + . ID=LTnewLM_330026900.1;Parent=LTnewLM_330026900 LTnewLM_33 AUGUSTUS CDS 770387 771157 1 + 0 ID=LTnewLM_330026900.1:CDS:1;Parent=LTnewLM_330026900.1 ### LTnewLM_33 . polypeptide 770387 771157 . + . ID=LTnewLM_330026900.1:pep;Derives_from=LTnewLM_330026900.1;orthologous_to=LmjF.33.1850_mRNA;ortholog_cluster=OG0005180;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 771285 771635 1 + . ID=LTnewLM_330027000 LTnewLM_33 AUGUSTUS mRNA 771285 771635 1 + . ID=LTnewLM_330027000.1;Parent=LTnewLM_330027000 LTnewLM_33 AUGUSTUS CDS 771285 771635 1 + 0 ID=LTnewLM_330027000.1:CDS:1;Parent=LTnewLM_330027000.1 ### LTnewLM_33 . polypeptide 771285 771635 . + . ID=LTnewLM_330027000.1:pep;Derives_from=LTnewLM_330027000.1;orthologous_to=LTnewLM_230023600.1,LTnewLM_290029200.1,LTnewLM_300035900.1,LTnewLM_330026600.1,LTnewLM_350026400.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 772858 774780 1 + . ID=LTnewLM_330027100 LTnewLM_33 AUGUSTUS mRNA 772858 774780 1 + . ID=LTnewLM_330027100.1;Parent=LTnewLM_330027100 LTnewLM_33 AUGUSTUS CDS 772858 774780 1 + 0 ID=LTnewLM_330027100.1:CDS:1;Parent=LTnewLM_330027100.1 ### LTnewLM_33 . polypeptide 772858 774780 . + . ID=LTnewLM_330027100.1:pep;Derives_from=LTnewLM_330027100.1;orthologous_to=LmjF.33.1860_mRNA;ortholog_cluster=OG0005181;product=term%3DABC transporter transmembrane region 2/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06472|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_33 Pfam protein_match 773089 773889 . + . Parent=LTnewLM_330027100.1:pep;Name=PF06472;signature_desc=ABC transporter transmembrane region 2;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_33 Pfam protein_match 774175 774621 . + . Parent=LTnewLM_330027100.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_33 AUGUSTUS gene 777061 779019 1 + . ID=LTnewLM_330027200 LTnewLM_33 AUGUSTUS mRNA 777061 779019 1 + . ID=LTnewLM_330027200.1;Parent=LTnewLM_330027200 LTnewLM_33 AUGUSTUS CDS 777061 779019 1 + 0 ID=LTnewLM_330027200.1:CDS:1;Parent=LTnewLM_330027200.1 ### LTnewLM_33 . polypeptide 777061 779019 . + . ID=LTnewLM_330027200.1:pep;Derives_from=LTnewLM_330027200.1;orthologous_to=LmjF.33.1870_mRNA;ortholog_cluster=OG0005182;product=term%3DNOG1 N-terminal helical domain/Ferrous iron transport protein B/50S ribosome-binding GTPase/Nucleolar GTP-binding protein 1 (NOG1)/NOGCT (NUC087) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17835|Pfam:PF02421|Pfam:PF01926|Pfam:PF06858|Pfam:PF08155;Ontology_term=GO:0005525,GO:0016021,GO:0015684,GO:0015093 LTnewLM_33 Pfam protein_match 777079 777555 . + . Parent=LTnewLM_330027200.1:pep;Name=PF17835;signature_desc=NOG1 N-terminal helical domain LTnewLM_33 Pfam protein_match 777574 777951 . + . Parent=LTnewLM_330027200.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_33 Pfam protein_match 777577 777930 . + . Parent=LTnewLM_330027200.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 777769 777936 . + . Parent=LTnewLM_330027200.1:pep;Name=PF06858;signature_desc=Nucleolar GTP-binding protein 1 (NOG1);Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 778249 778407 . + . Parent=LTnewLM_330027200.1:pep;Name=PF08155;signature_desc=NOGCT (NUC087) domain ### LTnewLM_33 . pseudogene 780857 781792 . + . ID=LTnewLM_330027300:pseudogene;coverage=0.998;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.1880_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 780857 781792 . + . ID=LTnewLM_330027300.1;Parent=LTnewLM_330027300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 780857 781792 . + . ID=LTnewLM_330027300.1:pseudogenic_exon:1;Parent=LTnewLM_330027300.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 780857 781792 . + . ID=LTnewLM_330027300.1:pep;Derives_from=LTnewLM_330027300.1;orthologous_to=LmjF.33.1880_mRNA;ortholog_cluster=OG0007634;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 781724 781768 . + . Parent=LTnewLM_330027300.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_33 AUGUSTUS gene 782661 784562 1 + . ID=LTnewLM_330027400 LTnewLM_33 AUGUSTUS mRNA 782661 784562 1 + . ID=LTnewLM_330027400.1;Parent=LTnewLM_330027400 LTnewLM_33 AUGUSTUS CDS 782661 784562 1 + 0 ID=LTnewLM_330027400.1:CDS:1;Parent=LTnewLM_330027400.1 ### LTnewLM_33 . polypeptide 782661 784562 . + . ID=LTnewLM_330027400.1:pep;Derives_from=LTnewLM_330027400.1;orthologous_to=LmjF.33.1890_mRNA;ortholog_cluster=OG0005183;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 785208 785591 1 + . ID=LTnewLM_330027500 LTnewLM_33 AUGUSTUS mRNA 785208 785591 1 + . ID=LTnewLM_330027500.1;Parent=LTnewLM_330027500 LTnewLM_33 AUGUSTUS CDS 785208 785591 1 + 0 ID=LTnewLM_330027500.1:CDS:1;Parent=LTnewLM_330027500.1 ### LTnewLM_33 . polypeptide 785208 785591 . + . ID=LTnewLM_330027500.1:pep;Derives_from=LTnewLM_330027500.1;orthologous_to=LmjF.33.1895_mRNA;ortholog_cluster=OG0005184;product=term%3DFOP N terminal dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09398;Ontology_term=GO:0034453,GO:0005815 LTnewLM_33 Pfam protein_match 785382 785552 . + . Parent=LTnewLM_330027500.1:pep;Name=PF09398;signature_desc=FOP N terminal dimerisation domain;Ontology_term=GO:0034453,GO:0005815 ### LTnewLM_33 AUGUSTUS gene 786419 787033 1 + . ID=LTnewLM_330027600 LTnewLM_33 AUGUSTUS mRNA 786419 787033 1 + . ID=LTnewLM_330027600.1;Parent=LTnewLM_330027600 LTnewLM_33 AUGUSTUS CDS 786419 787033 1 + 0 ID=LTnewLM_330027600.1:CDS:1;Parent=LTnewLM_330027600.1 ### LTnewLM_33 . polypeptide 786419 787033 . + . ID=LTnewLM_330027600.1:pep;Derives_from=LTnewLM_330027600.1;orthologous_to=LmjF.33.1900_mRNA;ortholog_cluster=OG0005185;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_33 Pfam protein_match 786458 786940 . + . Parent=LTnewLM_330027600.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_33 AUGUSTUS gene 789090 790844 1 + . ID=LTnewLM_330027700 LTnewLM_33 AUGUSTUS mRNA 789090 790844 1 + . ID=LTnewLM_330027700.1;Parent=LTnewLM_330027700 LTnewLM_33 AUGUSTUS CDS 789090 790844 1 + 0 ID=LTnewLM_330027700.1:CDS:1;Parent=LTnewLM_330027700.1 ### LTnewLM_33 . polypeptide 789090 790844 . + . ID=LTnewLM_330027700.1:pep;Derives_from=LTnewLM_330027700.1;orthologous_to=LmjF.33.1910_mRNA;ortholog_cluster=OG0005186;product=term%3DHistone-binding protein RBBP4 or subunit C of CAF1 complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12265 LTnewLM_33 Pfam protein_match 789531 789722 . + . Parent=LTnewLM_330027700.1:pep;Name=PF12265;signature_desc=Histone-binding protein RBBP4 or subunit C of CAF1 complex ### LTnewLM_33 AUGUSTUS gene 792032 792601 1 + . ID=LTnewLM_330027800 LTnewLM_33 AUGUSTUS mRNA 792032 792601 1 + . ID=LTnewLM_330027800.1;Parent=LTnewLM_330027800 LTnewLM_33 AUGUSTUS CDS 792032 792601 1 + 0 ID=LTnewLM_330027800.1:CDS:1;Parent=LTnewLM_330027800.1 ### LTnewLM_33 . polypeptide 792032 792601 . + . ID=LTnewLM_330027800.1:pep;Derives_from=LTnewLM_330027800.1;orthologous_to=LmjF.33.1920_mRNA;ortholog_cluster=OG0005187;product=term%3DPhosphate transport (Pho88)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10032 LTnewLM_33 Pfam protein_match 792035 792517 . + . Parent=LTnewLM_330027800.1:pep;Name=PF10032;signature_desc=Phosphate transport (Pho88) ### LTnewLM_33 AUGUSTUS gene 793348 793872 1 + . ID=LTnewLM_330027900 LTnewLM_33 AUGUSTUS mRNA 793348 793872 1 + . ID=LTnewLM_330027900.1;Parent=LTnewLM_330027900 LTnewLM_33 AUGUSTUS CDS 793348 793872 1 + 0 ID=LTnewLM_330027900.1:CDS:1;Parent=LTnewLM_330027900.1 ### LTnewLM_33 . polypeptide 793348 793872 . + . ID=LTnewLM_330027900.1:pep;Derives_from=LTnewLM_330027900.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 794739 795809 1 + . ID=LTnewLM_330028000 LTnewLM_33 AUGUSTUS mRNA 794739 795809 1 + . ID=LTnewLM_330028000.1;Parent=LTnewLM_330028000 LTnewLM_33 AUGUSTUS CDS 794739 795809 1 + 0 ID=LTnewLM_330028000.1:CDS:1;Parent=LTnewLM_330028000.1 ### LTnewLM_33 . polypeptide 794739 795809 . + . ID=LTnewLM_330028000.1:pep;Derives_from=LTnewLM_330028000.1;orthologous_to=LmjF.33.1930_mRNA;ortholog_cluster=OG0005188;product=term%3DN-terminal domain of ribose phosphate pyrophosphokinase/Phosphoribosyl transferase domain/Phosphoribosyl synthetase-associated domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13793|Pfam:PF00156|Pfam:PF14572;Ontology_term=GO:0009165,GO:0000287,GO:0009116,GO:0004749 LTnewLM_33 Pfam protein_match 794847 795203 . + . Parent=LTnewLM_330028000.1:pep;Name=PF13793;signature_desc=N-terminal domain of ribose phosphate pyrophosphokinase LTnewLM_33 Pfam protein_match 795330 795602 . + . Parent=LTnewLM_330028000.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 LTnewLM_33 Pfam protein_match 795462 795794 . + . Parent=LTnewLM_330028000.1:pep;Name=PF14572;signature_desc=Phosphoribosyl synthetase-associated domain;Ontology_term=GO:0000287,GO:0004749,GO:0009165 ### LTnewLM_33 AUGUSTUS gene 798736 801708 1 + . ID=LTnewLM_330028100 LTnewLM_33 AUGUSTUS mRNA 798736 801708 1 + . ID=LTnewLM_330028100.1;Parent=LTnewLM_330028100 LTnewLM_33 AUGUSTUS CDS 798736 801708 1 + 0 ID=LTnewLM_330028100.1:CDS:1;Parent=LTnewLM_330028100.1 ### LTnewLM_33 . polypeptide 798736 801708 . + . ID=LTnewLM_330028100.1:pep;Derives_from=LTnewLM_330028100.1;orthologous_to=LmjF.33.1940_mRNA;ortholog_cluster=OG0005189;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 803112 805196 1 + . ID=LTnewLM_330028200 LTnewLM_33 AUGUSTUS mRNA 803112 805196 1 + . ID=LTnewLM_330028200.1;Parent=LTnewLM_330028200 LTnewLM_33 AUGUSTUS CDS 803112 805196 1 + 0 ID=LTnewLM_330028200.1:CDS:1;Parent=LTnewLM_330028200.1 ### LTnewLM_33 . polypeptide 803112 805196 . + . ID=LTnewLM_330028200.1:pep;Derives_from=LTnewLM_330028200.1;orthologous_to=LmjF.33.1950_mRNA;ortholog_cluster=OG0005190;product=term%3DPentacotripeptide-repeat region of PRORP/Protein-only RNase P%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17177|Pfam:PF16953 LTnewLM_33 Pfam protein_match 803283 803765 . + . Parent=LTnewLM_330028200.1:pep;Name=PF17177;signature_desc=Pentacotripeptide-repeat region of PRORP LTnewLM_33 Pfam protein_match 804357 804785 . + . Parent=LTnewLM_330028200.1:pep;Name=PF16953;signature_desc=Protein-only RNase P ### LTnewLM_33 AUGUSTUS gene 806038 806289 1 + . ID=LTnewLM_330028300 LTnewLM_33 AUGUSTUS mRNA 806038 806289 1 + . ID=LTnewLM_330028300.1;Parent=LTnewLM_330028300 LTnewLM_33 AUGUSTUS CDS 806038 806289 1 + 0 ID=LTnewLM_330028300.1:CDS:1;Parent=LTnewLM_330028300.1 ### LTnewLM_33 . polypeptide 806038 806289 . + . ID=LTnewLM_330028300.1:pep;Derives_from=LTnewLM_330028300.1;orthologous_to=LTnewLM_350057900.1,LmjF.33.1955_mRNA,LmjF.35.5100_mRNA;ortholog_cluster=OG0000238;product=term%3DRibosomal protein L37e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01907;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_33 Pfam protein_match 806041 806193 . + . Parent=LTnewLM_330028300.1:pep;Name=PF01907;signature_desc=Ribosomal protein L37e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_33 AUGUSTUS gene 807890 809761 1 + . ID=LTnewLM_330028400 LTnewLM_33 AUGUSTUS mRNA 807890 809761 1 + . ID=LTnewLM_330028400.1;Parent=LTnewLM_330028400 LTnewLM_33 AUGUSTUS CDS 807890 809761 1 + 0 ID=LTnewLM_330028400.1:CDS:1;Parent=LTnewLM_330028400.1 ### LTnewLM_33 . polypeptide 807890 809761 . + . ID=LTnewLM_330028400.1:pep;Derives_from=LTnewLM_330028400.1;orthologous_to=LmjF.33.1960_mRNA;ortholog_cluster=OG0005191;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 810919 812625 1 + . ID=LTnewLM_330028500 LTnewLM_33 AUGUSTUS mRNA 810919 812625 1 + . ID=LTnewLM_330028500.1;Parent=LTnewLM_330028500 LTnewLM_33 AUGUSTUS CDS 810919 812625 1 + 0 ID=LTnewLM_330028500.1:CDS:1;Parent=LTnewLM_330028500.1 ### LTnewLM_33 . polypeptide 810919 812625 . + . ID=LTnewLM_330028500.1:pep;Derives_from=LTnewLM_330028500.1;orthologous_to=LmjF.33.1970_mRNA;ortholog_cluster=OG0005192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 814348 815694 1 + . ID=LTnewLM_330028600 LTnewLM_33 AUGUSTUS mRNA 814348 815694 1 + . ID=LTnewLM_330028600.1;Parent=LTnewLM_330028600 LTnewLM_33 AUGUSTUS CDS 814348 815694 1 + 0 ID=LTnewLM_330028600.1:CDS:1;Parent=LTnewLM_330028600.1 ### LTnewLM_33 . polypeptide 814348 815694 . + . ID=LTnewLM_330028600.1:pep;Derives_from=LTnewLM_330028600.1;orthologous_to=LmjF.33.1980_mRNA;ortholog_cluster=OG0005193;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531|Pfam:PF00169;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_33 Pfam protein_match 814453 815226 . + . Parent=LTnewLM_330028600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 814462 815217 . + . Parent=LTnewLM_330028600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 814780 815193 . + . Parent=LTnewLM_330028600.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_33 Pfam protein_match 815404 815679 . + . Parent=LTnewLM_330028600.1:pep;Name=PF00169;signature_desc=PH domain ### LTnewLM_33 AUGUSTUS gene 821502 823442 1 + . ID=LTnewLM_330028700 LTnewLM_33 AUGUSTUS mRNA 821502 823442 1 + . ID=LTnewLM_330028700.1;Parent=LTnewLM_330028700 LTnewLM_33 AUGUSTUS CDS 821502 823442 1 + 0 ID=LTnewLM_330028700.1:CDS:1;Parent=LTnewLM_330028700.1 ### LTnewLM_33 . polypeptide 821502 823442 . + . ID=LTnewLM_330028700.1:pep;Derives_from=LTnewLM_330028700.1;orthologous_to=LmjF.33.1990_mRNA;ortholog_cluster=OG0005194;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 824512 824859 1 + . ID=LTnewLM_330028800 LTnewLM_33 AUGUSTUS mRNA 824512 824859 1 + . ID=LTnewLM_330028800.1;Parent=LTnewLM_330028800 LTnewLM_33 AUGUSTUS CDS 824512 824859 1 + 0 ID=LTnewLM_330028800.1:CDS:1;Parent=LTnewLM_330028800.1 ### LTnewLM_33 . polypeptide 824512 824859 . + . ID=LTnewLM_330028800.1:pep;Derives_from=LTnewLM_330028800.1;orthologous_to=LmjF.33.2000_mRNA;ortholog_cluster=OG0005195;product=term%3DPresenilin enhancer-2 subunit of gamma secretase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10251 LTnewLM_33 Pfam protein_match 824539 824730 . + . Parent=LTnewLM_330028800.1:pep;Name=PF10251;signature_desc=Presenilin enhancer-2 subunit of gamma secretase ### LTnewLM_33 AUGUSTUS gene 827513 831652 1 + . ID=LTnewLM_330028900 LTnewLM_33 AUGUSTUS mRNA 827513 831652 1 + . ID=LTnewLM_330028900.1;Parent=LTnewLM_330028900 LTnewLM_33 AUGUSTUS CDS 827513 831652 1 + 0 ID=LTnewLM_330028900.1:CDS:1;Parent=LTnewLM_330028900.1 ### LTnewLM_33 . polypeptide 827513 831652 . + . ID=LTnewLM_330028900.1:pep;Derives_from=LTnewLM_330028900.1;orthologous_to=LmjF.33.2010_mRNA;ortholog_cluster=OG0005196;product=term%3DMIT (microtubule interacting and transport) domain/Calpain family cysteine protease/Calpain large subunit%2C domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04212|Pfam:PF00648|Pfam:PF01067;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_33 Pfam protein_match 827540 827719 . + . Parent=LTnewLM_330028900.1:pep;Name=PF04212;signature_desc=MIT (microtubule interacting and transport) domain LTnewLM_33 Pfam protein_match 828665 829441 . + . Parent=LTnewLM_330028900.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_33 Pfam protein_match 830129 830221 . + . Parent=LTnewLM_330028900.1:pep;Name=PF01067;signature_desc=Calpain large subunit%2C domain III ### LTnewLM_33 AUGUSTUS gene 836284 838908 1 + . ID=LTnewLM_330029000 LTnewLM_33 AUGUSTUS mRNA 836284 838908 1 + . ID=LTnewLM_330029000.1;Parent=LTnewLM_330029000 LTnewLM_33 AUGUSTUS CDS 836284 838908 1 + 0 ID=LTnewLM_330029000.1:CDS:1;Parent=LTnewLM_330029000.1 ### LTnewLM_33 . polypeptide 836284 838908 . + . ID=LTnewLM_330029000.1:pep;Derives_from=LTnewLM_330029000.1;orthologous_to=LmjF.33.2020_mRNA;ortholog_cluster=OG0005197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 844522 847854 1 + . ID=LTnewLM_330029100 LTnewLM_33 AUGUSTUS mRNA 844522 847854 1 + . ID=LTnewLM_330029100.1;Parent=LTnewLM_330029100 LTnewLM_33 AUGUSTUS CDS 844522 847854 1 + 0 ID=LTnewLM_330029100.1:CDS:1;Parent=LTnewLM_330029100.1 ### LTnewLM_33 . polypeptide 844522 847854 . + . ID=LTnewLM_330029100.1:pep;Derives_from=LTnewLM_330029100.1;orthologous_to=LmjF.33.2030_mRNA;ortholog_cluster=OG0005198;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 848915 849466 1 + . ID=LTnewLM_330029200 LTnewLM_33 AUGUSTUS mRNA 848915 849466 1 + . ID=LTnewLM_330029200.1;Parent=LTnewLM_330029200 LTnewLM_33 AUGUSTUS CDS 848915 849466 1 + 0 ID=LTnewLM_330029200.1:CDS:1;Parent=LTnewLM_330029200.1 ### LTnewLM_33 . polypeptide 848915 849466 . + . ID=LTnewLM_330029200.1:pep;Derives_from=LTnewLM_330029200.1;product=term%3Dhypothetical protein ### LTnewLM_33 Liftoff gene 850217 852949 . + . ID=LTnewLM_330029300;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2040_0 LTnewLM_33 Liftoff mRNA 850217 852949 . + . ID=LTnewLM_330029300.1;Parent=LTnewLM_330029300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 850217 852949 . + 0 ID=LTnewLM_330029300.1:CDS:1;Parent=LTnewLM_330029300.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 850217 852949 . + . ID=LTnewLM_330029300.1:pep;Derives_from=LTnewLM_330029300.1;orthologous_to=LmjF.33.2040_mRNA;ortholog_cluster=OG0005199;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 854191 855426 1 + . ID=LTnewLM_330029400 LTnewLM_33 AUGUSTUS mRNA 854191 855426 1 + . ID=LTnewLM_330029400.1;Parent=LTnewLM_330029400 LTnewLM_33 AUGUSTUS CDS 854191 855426 1 + 0 ID=LTnewLM_330029400.1:CDS:1;Parent=LTnewLM_330029400.1 ### LTnewLM_33 . polypeptide 854191 855426 . + . ID=LTnewLM_330029400.1:pep;Derives_from=LTnewLM_330029400.1;orthologous_to=LmjF.33.2050_mRNA;ortholog_cluster=OG0005200;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 856120 856470 1 + . ID=LTnewLM_330029500 LTnewLM_33 AUGUSTUS mRNA 856120 856470 1 + . ID=LTnewLM_330029500.1;Parent=LTnewLM_330029500 LTnewLM_33 AUGUSTUS CDS 856120 856470 1 + 0 ID=LTnewLM_330029500.1:CDS:1;Parent=LTnewLM_330029500.1 ### LTnewLM_33 . polypeptide 856120 856470 . + . ID=LTnewLM_330029500.1:pep;Derives_from=LTnewLM_330029500.1;orthologous_to=LmjF.33.2060_mRNA;ortholog_cluster=OG0005201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 860892 863903 1 + . ID=LTnewLM_330029600 LTnewLM_33 AUGUSTUS mRNA 860892 863903 1 + . ID=LTnewLM_330029600.1;Parent=LTnewLM_330029600 LTnewLM_33 AUGUSTUS CDS 860892 863903 1 + 0 ID=LTnewLM_330029600.1:CDS:1;Parent=LTnewLM_330029600.1 ### LTnewLM_33 . polypeptide 860892 863903 . + . ID=LTnewLM_330029600.1:pep;Derives_from=LTnewLM_330029600.1;orthologous_to=LmjF.33.2070_mRNA;ortholog_cluster=OG0005202;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_33 Pfam protein_match 860916 861125 . + . Parent=LTnewLM_330029600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 860919 861116 . + . Parent=LTnewLM_330029600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 861267 862055 . + . Parent=LTnewLM_330029600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_33 Pfam protein_match 861267 862067 . + . Parent=LTnewLM_330029600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_33 AUGUSTUS gene 865539 869288 1 + . ID=LTnewLM_330029700 LTnewLM_33 AUGUSTUS mRNA 865539 869288 1 + . ID=LTnewLM_330029700.1;Parent=LTnewLM_330029700 LTnewLM_33 AUGUSTUS CDS 865539 869288 1 + 0 ID=LTnewLM_330029700.1:CDS:1;Parent=LTnewLM_330029700.1 ### LTnewLM_33 . polypeptide 865539 869288 . + . ID=LTnewLM_330029700.1:pep;Derives_from=LTnewLM_330029700.1;orthologous_to=LmjF.33.2080_mRNA;ortholog_cluster=OG0005203;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 870761 874252 1 + . ID=LTnewLM_330029800 LTnewLM_33 AUGUSTUS mRNA 870761 874252 1 + . ID=LTnewLM_330029800.1;Parent=LTnewLM_330029800 LTnewLM_33 AUGUSTUS CDS 870761 874252 1 + 0 ID=LTnewLM_330029800.1:CDS:1;Parent=LTnewLM_330029800.1 ### LTnewLM_33 . polypeptide 870761 874252 . + . ID=LTnewLM_330029800.1:pep;Derives_from=LTnewLM_330029800.1;orthologous_to=LmjF.33.2090_mRNA;ortholog_cluster=OG0005204;product=term%3DHeavy-metal-associated domain/E1-E2 ATPase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00403|Pfam:PF00122|Pfam:PF00702|Pfam:PF08282;Ontology_term=GO:0030001,GO:0046872,GO:0000166 LTnewLM_33 Pfam protein_match 870815 870997 . + . Parent=LTnewLM_330029800.1:pep;Name=PF00403;signature_desc=Heavy-metal-associated domain;Ontology_term=GO:0046872,GO:0030001 LTnewLM_33 Pfam protein_match 871502 871675 . + . Parent=LTnewLM_330029800.1:pep;Name=PF00403;signature_desc=Heavy-metal-associated domain;Ontology_term=GO:0046872,GO:0030001 LTnewLM_33 Pfam protein_match 871826 871993 . + . Parent=LTnewLM_330029800.1:pep;Name=PF00403;signature_desc=Heavy-metal-associated domain;Ontology_term=GO:0046872,GO:0030001 LTnewLM_33 Pfam protein_match 872501 873082 . + . Parent=LTnewLM_330029800.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_33 Pfam protein_match 873131 873916 . + . Parent=LTnewLM_330029800.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_33 Pfam protein_match 873833 873979 . + . Parent=LTnewLM_330029800.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase ### LTnewLM_33 AUGUSTUS gene 875571 877079 1 + . ID=LTnewLM_330029900 LTnewLM_33 AUGUSTUS mRNA 875571 877079 1 + . ID=LTnewLM_330029900.1;Parent=LTnewLM_330029900 LTnewLM_33 AUGUSTUS CDS 875571 877079 1 + 0 ID=LTnewLM_330029900.1:CDS:1;Parent=LTnewLM_330029900.1 ### LTnewLM_33 . polypeptide 875571 877079 . + . ID=LTnewLM_330029900.1:pep;Derives_from=LTnewLM_330029900.1;orthologous_to=LmjF.33.2100_mRNA;ortholog_cluster=OG0005205;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_33 Pfam protein_match 875670 876092 . + . Parent=LTnewLM_330029900.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) LTnewLM_33 Pfam protein_match 876384 876599 . + . Parent=LTnewLM_330029900.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_33 AUGUSTUS gene 878694 880556 1 + . ID=LTnewLM_330030000 LTnewLM_33 AUGUSTUS mRNA 878694 880556 1 + . ID=LTnewLM_330030000.1;Parent=LTnewLM_330030000 LTnewLM_33 AUGUSTUS CDS 878694 880556 1 + 0 ID=LTnewLM_330030000.1:CDS:1;Parent=LTnewLM_330030000.1 ### LTnewLM_33 . polypeptide 878694 880556 . + . ID=LTnewLM_330030000.1:pep;Derives_from=LTnewLM_330030000.1;orthologous_to=LmjF.33.2110_mRNA;ortholog_cluster=OG0005206;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_33 Pfam protein_match 879594 879818 . + . Parent=LTnewLM_330030000.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) LTnewLM_33 Pfam protein_match 880077 880415 . + . Parent=LTnewLM_330030000.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_33 AUGUSTUS gene 882100 882759 1 + . ID=LTnewLM_330030100 LTnewLM_33 AUGUSTUS mRNA 882100 882759 1 + . ID=LTnewLM_330030100.1;Parent=LTnewLM_330030100 LTnewLM_33 AUGUSTUS CDS 882100 882759 1 + 0 ID=LTnewLM_330030100.1:CDS:1;Parent=LTnewLM_330030100.1 ### LTnewLM_33 . polypeptide 882100 882759 . + . ID=LTnewLM_330030100.1:pep;Derives_from=LTnewLM_330030100.1;orthologous_to=LmjF.33.2120_mRNA;ortholog_cluster=OG0005207;product=term%3DHIT zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04438 LTnewLM_33 Pfam protein_match 882103 882183 . + . Parent=LTnewLM_330030100.1:pep;Name=PF04438;signature_desc=HIT zinc finger ### LTnewLM_33 AUGUSTUS gene 888003 890765 1 + . ID=LTnewLM_330030200 LTnewLM_33 AUGUSTUS mRNA 888003 890765 1 + . ID=LTnewLM_330030200.1;Parent=LTnewLM_330030200 LTnewLM_33 AUGUSTUS CDS 888003 890765 1 + 0 ID=LTnewLM_330030200.1:CDS:1;Parent=LTnewLM_330030200.1 ### LTnewLM_33 . polypeptide 888003 890765 . + . ID=LTnewLM_330030200.1:pep;Derives_from=LTnewLM_330030200.1;orthologous_to=LmjF.33.2130_mRNA;ortholog_cluster=OG0005208;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 892771 895644 1 + . ID=LTnewLM_330030300 LTnewLM_33 AUGUSTUS mRNA 892771 895644 1 + . ID=LTnewLM_330030300.1;Parent=LTnewLM_330030300 LTnewLM_33 AUGUSTUS CDS 892771 895644 1 + 0 ID=LTnewLM_330030300.1:CDS:1;Parent=LTnewLM_330030300.1 ### LTnewLM_33 . polypeptide 892771 895644 . + . ID=LTnewLM_330030300.1:pep;Derives_from=LTnewLM_330030300.1;orthologous_to=LmjF.33.2140_mRNA;ortholog_cluster=OG0005209;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_33 Pfam protein_match 892846 893151 . + . Parent=LTnewLM_330030300.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_33 Pfam protein_match 892849 893673 . + . Parent=LTnewLM_330030300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_33 AUGUSTUS gene 899304 901926 0.64 + . ID=LTnewLM_330030400 LTnewLM_33 AUGUSTUS mRNA 899304 901926 0.64 + . ID=LTnewLM_330030400.1;Parent=LTnewLM_330030400 LTnewLM_33 AUGUSTUS CDS 899304 901523 0.64 + 0 ID=LTnewLM_330030400.1:CDS:1;Parent=LTnewLM_330030400.1 LTnewLM_33 AUGUSTUS CDS 901624 901926 0.99 + 0 ID=LTnewLM_330030400.1:CDS:2;Parent=LTnewLM_330030400.1 ### LTnewLM_33 . polypeptide 899304 901926 . + . ID=LTnewLM_330030400.1:pep;Derives_from=LTnewLM_330030400.1;orthologous_to=LmjF.33.2150_mRNA;ortholog_cluster=OG0005210;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 906560 907165 1 + . ID=LTnewLM_330030500 LTnewLM_33 AUGUSTUS mRNA 906560 907165 1 + . ID=LTnewLM_330030500.1;Parent=LTnewLM_330030500 LTnewLM_33 AUGUSTUS CDS 906560 907165 1 + 0 ID=LTnewLM_330030500.1:CDS:1;Parent=LTnewLM_330030500.1 ### LTnewLM_33 . polypeptide 906560 907165 . + . ID=LTnewLM_330030500.1:pep;Derives_from=LTnewLM_330030500.1;orthologous_to=LmjF.33.2160_mRNA;ortholog_cluster=OG0005211;product=term%3DAcid Phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12689;Ontology_term=GO:0016791 LTnewLM_33 Pfam protein_match 906605 907141 . + . Parent=LTnewLM_330030500.1:pep;Name=PF12689;signature_desc=Acid Phosphatase;Ontology_term=GO:0016791 ### LTnewLM_33 AUGUSTUS gene 908154 912575 1 + . ID=LTnewLM_330030600 LTnewLM_33 AUGUSTUS mRNA 908154 912575 1 + . ID=LTnewLM_330030600.1;Parent=LTnewLM_330030600 LTnewLM_33 AUGUSTUS CDS 908154 912575 1 + 0 ID=LTnewLM_330030600.1:CDS:1;Parent=LTnewLM_330030600.1 ### LTnewLM_33 . polypeptide 908154 912575 . + . ID=LTnewLM_330030600.1:pep;Derives_from=LTnewLM_330030600.1;orthologous_to=LmjF.33.2170_mRNA;ortholog_cluster=OG0005212;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 918062 922318 1 + . ID=LTnewLM_330030700 LTnewLM_33 AUGUSTUS mRNA 918062 922318 1 + . ID=LTnewLM_330030700.1;Parent=LTnewLM_330030700 LTnewLM_33 AUGUSTUS CDS 918062 922318 1 + 0 ID=LTnewLM_330030700.1:CDS:1;Parent=LTnewLM_330030700.1 ### LTnewLM_33 . polypeptide 918062 922318 . + . ID=LTnewLM_330030700.1:pep;Derives_from=LTnewLM_330030700.1;orthologous_to=LmjF.33.2180_mRNA;ortholog_cluster=OG0005213;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 928046 931371 . + . ID=LTnewLM_330030800:pseudogene;coverage=1.0;sequence_ID=0.904;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2190_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 928046 931371 . + . ID=LTnewLM_330030800.1;Parent=LTnewLM_330030800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 928046 931371 . + . ID=LTnewLM_330030800.1:pseudogenic_exon:1;Parent=LTnewLM_330030800.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 928046 931371 . + . ID=LTnewLM_330030800.1:pep;Derives_from=LTnewLM_330030800.1;orthologous_to=LmjF.33.2190_mRNA;ortholog_cluster=OG0007635;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 932838 934208 . + . ID=LTnewLM_330030900:pseudogene;coverage=0.996;sequence_ID=0.889;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2200_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 932838 934208 . + . ID=LTnewLM_330030900.1;Parent=LTnewLM_330030900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 932838 934208 . + . ID=LTnewLM_330030900.1:pseudogenic_exon:1;Parent=LTnewLM_330030900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 932838 934208 . + . ID=LTnewLM_330030900.1:pep;Derives_from=LTnewLM_330030900.1;orthologous_to=LmjF.33.2200_mRNA;ortholog_cluster=OG0007636;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 936997 937923 1 + . ID=LTnewLM_330031000 LTnewLM_33 AUGUSTUS mRNA 936997 937923 1 + . ID=LTnewLM_330031000.1;Parent=LTnewLM_330031000 LTnewLM_33 AUGUSTUS CDS 936997 937923 1 + 0 ID=LTnewLM_330031000.1:CDS:1;Parent=LTnewLM_330031000.1 ### LTnewLM_33 . polypeptide 936997 937923 . + . ID=LTnewLM_330031000.1:pep;Derives_from=LTnewLM_330031000.1;orthologous_to=LmjF.33.2205_mRNA;ortholog_cluster=OG0005214;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 938659 939513 1 + . ID=LTnewLM_330031100 LTnewLM_33 AUGUSTUS mRNA 938659 939513 1 + . ID=LTnewLM_330031100.1;Parent=LTnewLM_330031100 LTnewLM_33 AUGUSTUS CDS 938659 939513 1 + 0 ID=LTnewLM_330031100.1:CDS:1;Parent=LTnewLM_330031100.1 ### LTnewLM_33 . polypeptide 938659 939513 . + . ID=LTnewLM_330031100.1:pep;Derives_from=LTnewLM_330031100.1;orthologous_to=LmjF.33.2210_mRNA;ortholog_cluster=OG0005215;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 940780 943047 1 + . ID=LTnewLM_330031200 LTnewLM_33 AUGUSTUS mRNA 940780 943047 1 + . ID=LTnewLM_330031200.1;Parent=LTnewLM_330031200 LTnewLM_33 AUGUSTUS CDS 940780 943047 1 + 0 ID=LTnewLM_330031200.1:CDS:1;Parent=LTnewLM_330031200.1 ### LTnewLM_33 . polypeptide 940780 943047 . + . ID=LTnewLM_330031200.1:pep;Derives_from=LTnewLM_330031200.1;orthologous_to=LmjF.33.2220_mRNA;ortholog_cluster=OG0005216;product=term%3DCilia- and flagella-associated protein 91%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14738 LTnewLM_33 Pfam protein_match 941254 941712 . + . Parent=LTnewLM_330031200.1:pep;Name=PF14738;signature_desc=Cilia- and flagella-associated protein 91 ### LTnewLM_33 AUGUSTUS gene 944541 946478 1 + . ID=LTnewLM_330031300 LTnewLM_33 AUGUSTUS mRNA 944541 946478 1 + . ID=LTnewLM_330031300.1;Parent=LTnewLM_330031300 LTnewLM_33 AUGUSTUS CDS 944541 946478 1 + 0 ID=LTnewLM_330031300.1:CDS:1;Parent=LTnewLM_330031300.1 ### LTnewLM_33 . polypeptide 944541 946478 . + . ID=LTnewLM_330031300.1:pep;Derives_from=LTnewLM_330031300.1;orthologous_to=LmjF.33.2230_mRNA;ortholog_cluster=OG0005217;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 947125 948060 1 + . ID=LTnewLM_330031400 LTnewLM_33 AUGUSTUS mRNA 947125 948060 1 + . ID=LTnewLM_330031400.1;Parent=LTnewLM_330031400 LTnewLM_33 AUGUSTUS CDS 947125 948060 1 + 0 ID=LTnewLM_330031400.1:CDS:1;Parent=LTnewLM_330031400.1 ### LTnewLM_33 . polypeptide 947125 948060 . + . ID=LTnewLM_330031400.1:pep;Derives_from=LTnewLM_330031400.1;orthologous_to=LmjF.33.2240_mRNA;ortholog_cluster=OG0005218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 948979 950337 1 + . ID=LTnewLM_330031500 LTnewLM_33 AUGUSTUS mRNA 948979 950337 1 + . ID=LTnewLM_330031500.1;Parent=LTnewLM_330031500 LTnewLM_33 AUGUSTUS CDS 948979 950337 1 + 0 ID=LTnewLM_330031500.1:CDS:1;Parent=LTnewLM_330031500.1 ### LTnewLM_33 . polypeptide 948979 950337 . + . ID=LTnewLM_330031500.1:pep;Derives_from=LTnewLM_330031500.1;orthologous_to=LmjF.33.2250_mRNA;ortholog_cluster=OG0005219;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 951422 955711 1 + . ID=LTnewLM_330031600 LTnewLM_33 AUGUSTUS mRNA 951422 955711 1 + . ID=LTnewLM_330031600.1;Parent=LTnewLM_330031600 LTnewLM_33 AUGUSTUS CDS 951422 955711 1 + 0 ID=LTnewLM_330031600.1:CDS:1;Parent=LTnewLM_330031600.1 ### LTnewLM_33 . polypeptide 951422 955711 . + . ID=LTnewLM_330031600.1:pep;Derives_from=LTnewLM_330031600.1;orthologous_to=LmjF.33.2260_mRNA;ortholog_cluster=OG0005220;product=term%3DPPPDE putative peptidase domain/PUB domain/Glycosyl hydrolase family 85%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05903|Pfam:PF09409|Pfam:PF03644;Ontology_term=GO:0033925,GO:0005737 LTnewLM_33 Pfam protein_match 951452 951877 . + . Parent=LTnewLM_330031600.1:pep;Name=PF05903;signature_desc=PPPDE putative peptidase domain LTnewLM_33 Pfam protein_match 952115 952330 . + . Parent=LTnewLM_330031600.1:pep;Name=PF09409;signature_desc=PUB domain LTnewLM_33 Pfam protein_match 953555 954472 . + . Parent=LTnewLM_330031600.1:pep;Name=PF03644;signature_desc=Glycosyl hydrolase family 85;Ontology_term=GO:0033925,GO:0005737 ### LTnewLM_33 AUGUSTUS gene 957808 961419 2 + . ID=LTnewLM_330031700 LTnewLM_33 AUGUSTUS mRNA 957808 961419 1 + . ID=LTnewLM_330031700.1;Parent=LTnewLM_330031700 LTnewLM_33 AUGUSTUS CDS 957808 961419 1 + 0 ID=LTnewLM_330031700.1:CDS:1;Parent=LTnewLM_330031700.1 LTnewLM_33 AUGUSTUS mRNA 961057 961419 1 + . ID=LTnewLM_330031700.2;Parent=LTnewLM_330031700 LTnewLM_33 AUGUSTUS CDS 961057 961419 1 + 0 ID=LTnewLM_330031700.2:CDS:1;Parent=LTnewLM_330031700.2 ### LTnewLM_33 . polypeptide 957808 961419 . + . ID=LTnewLM_330031700.1:pep;Derives_from=LTnewLM_330031700.1;orthologous_to=LTnewLM_330031700.2,LmjF.33.2270_mRNA;ortholog_cluster=OG0000451;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 961057 961419 . + . ID=LTnewLM_330031700.2:pep;Derives_from=LTnewLM_330031700.2;orthologous_to=LTnewLM_330031700.1,LmjF.33.2270_mRNA;ortholog_cluster=OG0000451;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 962910 965996 1 + . ID=LTnewLM_330031800 LTnewLM_33 AUGUSTUS mRNA 962910 965996 1 + . ID=LTnewLM_330031800.1;Parent=LTnewLM_330031800 LTnewLM_33 AUGUSTUS CDS 962910 965996 1 + 0 ID=LTnewLM_330031800.1:CDS:1;Parent=LTnewLM_330031800.1 ### LTnewLM_33 . polypeptide 962910 965996 . + . ID=LTnewLM_330031800.1:pep;Derives_from=LTnewLM_330031800.1;orthologous_to=LmjF.33.2280_mRNA;ortholog_cluster=OG0005221;product=term%3DMYND finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753 LTnewLM_33 Pfam protein_match 964818 964937 . + . Parent=LTnewLM_330031800.1:pep;Name=PF01753;signature_desc=MYND finger ### LTnewLM_33 Liftoff gene 968306 974287 . + . ID=LTnewLM_330031900;coverage=0.997;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2290_0 LTnewLM_33 Liftoff mRNA 968306 974287 . + . ID=LTnewLM_330031900.1;Parent=LTnewLM_330031900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 968306 974287 . + 0 ID=LTnewLM_330031900.1:CDS:1;Parent=LTnewLM_330031900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 968306 974287 . + . ID=LTnewLM_330031900.1:pep;Derives_from=LTnewLM_330031900.1;orthologous_to=LmjF.33.2290_mRNA;ortholog_cluster=OG0005222;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_33 Pfam protein_match 972791 973378 . + . Parent=LTnewLM_330031900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_33 Pfam protein_match 972791 973384 . + . Parent=LTnewLM_330031900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_33 AUGUSTUS gene 977416 978591 1 + . ID=LTnewLM_330032000 LTnewLM_33 AUGUSTUS mRNA 977416 978591 1 + . ID=LTnewLM_330032000.1;Parent=LTnewLM_330032000 LTnewLM_33 AUGUSTUS CDS 977416 978591 1 + 0 ID=LTnewLM_330032000.1:CDS:1;Parent=LTnewLM_330032000.1 ### LTnewLM_33 . polypeptide 977416 978591 . + . ID=LTnewLM_330032000.1:pep;Derives_from=LTnewLM_330032000.1;orthologous_to=LmjF.33.2300_mRNA;ortholog_cluster=OG0005223;product=term%3DPolysaccharide biosynthesis protein/NAD dependent epimerase/dehydratase family/3-beta hydroxysteroid dehydrogenase/isomerase family/GDP-mannose 4%2C6 dehydratase/Male sterility protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02719|Pfam:PF01370|Pfam:PF01073|Pfam:PF16363|Pfam:PF07993;Ontology_term=GO:0003824,GO:0003854,GO:0055114,GO:0050662,GO:0006694,GO:0016616,GO:0009058 LTnewLM_33 Pfam protein_match 977422 977841 . + . Parent=LTnewLM_330032000.1:pep;Name=PF02719;signature_desc=Polysaccharide biosynthesis protein;Ontology_term=GO:0009058 LTnewLM_33 Pfam protein_match 977422 978300 . + . Parent=LTnewLM_330032000.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_33 Pfam protein_match 977425 977970 . + . Parent=LTnewLM_330032000.1:pep;Name=PF01073;signature_desc=3-beta hydroxysteroid dehydrogenase/isomerase family;Ontology_term=GO:0003854,GO:0016616,GO:0006694,GO:0055114 LTnewLM_33 Pfam protein_match 977425 978516 . + . Parent=LTnewLM_330032000.1:pep;Name=PF16363;signature_desc=GDP-mannose 4%2C6 dehydratase LTnewLM_33 Pfam protein_match 977431 978039 . + . Parent=LTnewLM_330032000.1:pep;Name=PF07993;signature_desc=Male sterility protein ### LTnewLM_33 AUGUSTUS gene 981181 982758 1 + . ID=LTnewLM_330032100 LTnewLM_33 AUGUSTUS mRNA 981181 982758 1 + . ID=LTnewLM_330032100.1;Parent=LTnewLM_330032100 LTnewLM_33 AUGUSTUS CDS 981181 982758 1 + 0 ID=LTnewLM_330032100.1:CDS:1;Parent=LTnewLM_330032100.1 ### LTnewLM_33 . polypeptide 981181 982758 . + . ID=LTnewLM_330032100.1:pep;Derives_from=LTnewLM_330032100.1;orthologous_to=LmjF.33.2310_mRNA;ortholog_cluster=OG0005224;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 983992 986349 1 + . ID=LTnewLM_330032200 LTnewLM_33 AUGUSTUS mRNA 983992 986349 1 + . ID=LTnewLM_330032200.1;Parent=LTnewLM_330032200 LTnewLM_33 AUGUSTUS CDS 983992 986349 1 + 0 ID=LTnewLM_330032200.1:CDS:1;Parent=LTnewLM_330032200.1 ### LTnewLM_33 . polypeptide 983992 986349 . + . ID=LTnewLM_330032200.1:pep;Derives_from=LTnewLM_330032200.1;orthologous_to=LmjF.33.2320_mRNA;ortholog_cluster=OG0005225;product=term%3DCDC45-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02724;Ontology_term=GO:0006270 LTnewLM_33 Pfam protein_match 984067 986058 . + . Parent=LTnewLM_330032200.1:pep;Name=PF02724;signature_desc=CDC45-like protein;Ontology_term=GO:0006270 ### LTnewLM_33 . pseudogene 988313 991992 . + . ID=LTnewLM_330032300:pseudogene;coverage=0.997;sequence_ID=0.912;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2330_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 988313 991992 . + . ID=LTnewLM_330032300.1;Parent=LTnewLM_330032300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 988313 991992 . + . ID=LTnewLM_330032300.1:pseudogenic_exon:1;Parent=LTnewLM_330032300.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 988313 991992 . + . ID=LTnewLM_330032300.1:pep;Derives_from=LTnewLM_330032300.1;orthologous_to=LmjF.33.2330_mRNA;ortholog_cluster=OG0007637;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 993249 994718 1 + . ID=LTnewLM_330032400 LTnewLM_33 AUGUSTUS mRNA 993249 994718 1 + . ID=LTnewLM_330032400.1;Parent=LTnewLM_330032400 LTnewLM_33 AUGUSTUS CDS 993249 994718 1 + 0 ID=LTnewLM_330032400.1:CDS:1;Parent=LTnewLM_330032400.1 ### LTnewLM_33 . polypeptide 993249 994718 . + . ID=LTnewLM_330032400.1:pep;Derives_from=LTnewLM_330032400.1;orthologous_to=LmjF.33.2340_mRNA;ortholog_cluster=OG0005226;product=term%3DCoenzyme A transferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01144;Ontology_term=GO:0008152,GO:0008410 LTnewLM_33 Pfam protein_match 993291 993977 . + . Parent=LTnewLM_330032400.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 LTnewLM_33 Pfam protein_match 994062 994646 . + . Parent=LTnewLM_330032400.1:pep;Name=PF01144;signature_desc=Coenzyme A transferase;Ontology_term=GO:0008410,GO:0008152 ### LTnewLM_33 AUGUSTUS gene 996480 999060 0.5 + . ID=LTnewLM_330032500 LTnewLM_33 AUGUSTUS mRNA 996480 999060 0.5 + . ID=LTnewLM_330032500.1;Parent=LTnewLM_330032500 LTnewLM_33 AUGUSTUS CDS 996480 998360 0.87 + 0 ID=LTnewLM_330032500.1:CDS:1;Parent=LTnewLM_330032500.1 LTnewLM_33 AUGUSTUS CDS 998419 999060 0.5 + 0 ID=LTnewLM_330032500.1:CDS:2;Parent=LTnewLM_330032500.1 ### LTnewLM_33 . polypeptide 996480 999060 . + . ID=LTnewLM_330032500.1:pep;Derives_from=LTnewLM_330032500.1;orthologous_to=LTnewLM_300008500.1,LmjF.30.0330_mRNA,LmjF.33.2350_mRNA;ortholog_cluster=OG0000209;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_33 Pfam protein_match 997230 997454 . + . Parent=LTnewLM_330032500.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_33 AUGUSTUS gene 1001770 1005831 1 + . ID=LTnewLM_330032600 LTnewLM_33 AUGUSTUS mRNA 1001770 1005831 1 + . ID=LTnewLM_330032600.1;Parent=LTnewLM_330032600 LTnewLM_33 AUGUSTUS CDS 1001770 1005831 1 + 0 ID=LTnewLM_330032600.1:CDS:1;Parent=LTnewLM_330032600.1 ### LTnewLM_33 . polypeptide 1001770 1005831 . + . ID=LTnewLM_330032600.1:pep;Derives_from=LTnewLM_330032600.1;orthologous_to=LmjF.33.2360_mRNA;ortholog_cluster=OG0005227;product=term%3DATP synthase regulation protein NCA2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08637 LTnewLM_33 Pfam protein_match 1004668 1005267 . + . Parent=LTnewLM_330032600.1:pep;Name=PF08637;signature_desc=ATP synthase regulation protein NCA2 LTnewLM_33 Pfam protein_match 1005607 1005807 . + . Parent=LTnewLM_330032600.1:pep;Name=PF08637;signature_desc=ATP synthase regulation protein NCA2 ### LTnewLM_33 AUGUSTUS gene 1006692 1008383 1 + . ID=LTnewLM_330032700 LTnewLM_33 AUGUSTUS mRNA 1006692 1008383 1 + . ID=LTnewLM_330032700.1;Parent=LTnewLM_330032700 LTnewLM_33 AUGUSTUS CDS 1006692 1008383 1 + 0 ID=LTnewLM_330032700.1:CDS:1;Parent=LTnewLM_330032700.1 ### LTnewLM_33 . polypeptide 1006692 1008383 . + . ID=LTnewLM_330032700.1:pep;Derives_from=LTnewLM_330032700.1;orthologous_to=LmjF.33.2370_mRNA;ortholog_cluster=OG0005228;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1009063 1009956 0.47 + . ID=LTnewLM_330032800 LTnewLM_33 AUGUSTUS mRNA 1009063 1009956 0.47 + . ID=LTnewLM_330032800.1;Parent=LTnewLM_330032800 LTnewLM_33 AUGUSTUS CDS 1009063 1009882 0.65 + 0 ID=LTnewLM_330032800.1:CDS:1;Parent=LTnewLM_330032800.1 LTnewLM_33 AUGUSTUS CDS 1009946 1009956 0.69 + 2 ID=LTnewLM_330032800.1:CDS:2;Parent=LTnewLM_330032800.1 ### LTnewLM_33 . polypeptide 1009063 1009956 . + . ID=LTnewLM_330032800.1:pep;Derives_from=LTnewLM_330032800.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1013162 1014790 1 + . ID=LTnewLM_330032900 LTnewLM_33 AUGUSTUS mRNA 1013162 1014790 1 + . ID=LTnewLM_330032900.1;Parent=LTnewLM_330032900 LTnewLM_33 AUGUSTUS CDS 1013162 1014790 1 + 0 ID=LTnewLM_330032900.1:CDS:1;Parent=LTnewLM_330032900.1 ### LTnewLM_33 . polypeptide 1013162 1014790 . + . ID=LTnewLM_330032900.1:pep;Derives_from=LTnewLM_330032900.1;orthologous_to=LmjF.33.2380_mRNA;ortholog_cluster=OG0005229;product=term%3DGRASP55/65 PDZ-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04495 LTnewLM_33 Pfam protein_match 1013468 1013950 . + . Parent=LTnewLM_330032900.1:pep;Name=PF04495;signature_desc=GRASP55/65 PDZ-like domain ### LTnewLM_33 AUGUSTUS gene 1016940 1019222 1 + . ID=LTnewLM_330033000 LTnewLM_33 AUGUSTUS mRNA 1016940 1019222 1 + . ID=LTnewLM_330033000.1;Parent=LTnewLM_330033000 LTnewLM_33 AUGUSTUS CDS 1016940 1019222 1 + 0 ID=LTnewLM_330033000.1:CDS:1;Parent=LTnewLM_330033000.1 ### LTnewLM_33 . polypeptide 1016940 1019222 . + . ID=LTnewLM_330033000.1:pep;Derives_from=LTnewLM_330033000.1;orthologous_to=LmjF.33.2390_mRNA;ortholog_cluster=OG0005230;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/Hsp90 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02518|Pfam:PF13589|Pfam:PF00183;Ontology_term=GO:0006950,GO:0006457,GO:0051082,GO:0005524 LTnewLM_33 Pfam protein_match 1017384 1017848 . + . Parent=LTnewLM_330033000.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 1017387 1017746 . + . Parent=LTnewLM_330033000.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase LTnewLM_33 Pfam protein_match 1017945 1019192 . + . Parent=LTnewLM_330033000.1:pep;Name=PF00183;signature_desc=Hsp90 protein;Ontology_term=GO:0005524,GO:0051082,GO:0006457,GO:0006950 ### LTnewLM_33 AUGUSTUS gene 1020679 1022382 1 + . ID=LTnewLM_330033100 LTnewLM_33 AUGUSTUS mRNA 1020679 1022382 1 + . ID=LTnewLM_330033100.1;Parent=LTnewLM_330033100 LTnewLM_33 AUGUSTUS CDS 1020679 1022382 1 + 0 ID=LTnewLM_330033100.1:CDS:1;Parent=LTnewLM_330033100.1 ### LTnewLM_33 . polypeptide 1020679 1022382 . + . ID=LTnewLM_330033100.1:pep;Derives_from=LTnewLM_330033100.1;orthologous_to=LmjF.33.2400_mRNA;ortholog_cluster=OG0005231;product=term%3DFerrous iron transport protein B/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02421|Pfam:PF01926;Ontology_term=GO:0005525,GO:0016021,GO:0015684,GO:0015093 LTnewLM_33 Pfam protein_match 1021591 1021770 . + . Parent=LTnewLM_330033100.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_33 Pfam protein_match 1021591 1021794 . + . Parent=LTnewLM_330033100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_33 AUGUSTUS gene 1023559 1025856 1 + . ID=LTnewLM_330033200 LTnewLM_33 AUGUSTUS mRNA 1023559 1025856 1 + . ID=LTnewLM_330033200.1;Parent=LTnewLM_330033200 LTnewLM_33 AUGUSTUS CDS 1023559 1025856 1 + 0 ID=LTnewLM_330033200.1:CDS:1;Parent=LTnewLM_330033200.1 ### LTnewLM_33 . polypeptide 1023559 1025856 . + . ID=LTnewLM_330033200.1:pep;Derives_from=LTnewLM_330033200.1;orthologous_to=LmjF.33.2410_mRNA;ortholog_cluster=OG0005232;product=term%3DPutative diphthamide synthesis protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01866 LTnewLM_33 Pfam protein_match 1024126 1024284 . + . Parent=LTnewLM_330033200.1:pep;Name=PF01866;signature_desc=Putative diphthamide synthesis protein LTnewLM_33 Pfam protein_match 1025086 1025442 . + . Parent=LTnewLM_330033200.1:pep;Name=PF01866;signature_desc=Putative diphthamide synthesis protein ### LTnewLM_33 AUGUSTUS gene 1026833 1028974 1 + . ID=LTnewLM_330033300 LTnewLM_33 AUGUSTUS mRNA 1026833 1028974 1 + . ID=LTnewLM_330033300.1;Parent=LTnewLM_330033300 LTnewLM_33 AUGUSTUS CDS 1026833 1028974 1 + 0 ID=LTnewLM_330033300.1:CDS:1;Parent=LTnewLM_330033300.1 ### LTnewLM_33 . polypeptide 1026833 1028974 . + . ID=LTnewLM_330033300.1:pep;Derives_from=LTnewLM_330033300.1;orthologous_to=LmjF.33.2420_mRNA;ortholog_cluster=OG0005233;product=term%3DMYND finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753 LTnewLM_33 Pfam protein_match 1027769 1027879 . + . Parent=LTnewLM_330033300.1:pep;Name=PF01753;signature_desc=MYND finger ### LTnewLM_33 AUGUSTUS gene 1030169 1032121 1 + . ID=LTnewLM_330033400 LTnewLM_33 AUGUSTUS mRNA 1030169 1032121 1 + . ID=LTnewLM_330033400.1;Parent=LTnewLM_330033400 LTnewLM_33 AUGUSTUS CDS 1030169 1032121 1 + 0 ID=LTnewLM_330033400.1:CDS:1;Parent=LTnewLM_330033400.1 ### LTnewLM_33 . polypeptide 1030169 1032121 . + . ID=LTnewLM_330033400.1:pep;Derives_from=LTnewLM_330033400.1;orthologous_to=LmjF.33.2430_mRNA;ortholog_cluster=OG0005234;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1033456 1034976 1 + . ID=LTnewLM_330033500 LTnewLM_33 AUGUSTUS mRNA 1033456 1034976 1 + . ID=LTnewLM_330033500.1;Parent=LTnewLM_330033500 LTnewLM_33 AUGUSTUS CDS 1033456 1034976 1 + 0 ID=LTnewLM_330033500.1:CDS:1;Parent=LTnewLM_330033500.1 ### LTnewLM_33 . polypeptide 1033456 1034976 . + . ID=LTnewLM_330033500.1:pep;Derives_from=LTnewLM_330033500.1;orthologous_to=LmjF.33.2440_mRNA;ortholog_cluster=OG0005235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 1036456 1041610 . + . ID=LTnewLM_330033600:pseudogene;coverage=0.993;sequence_ID=0.910;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.2450_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1036456 1041610 . + . ID=LTnewLM_330033600.1;Parent=LTnewLM_330033600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1036478 1041610 . + . ID=LTnewLM_330033600.1:pseudogenic_exon:1;Parent=LTnewLM_330033600.1;extra_copy_number=0 LTnewLM_33 . pseudogenic_transcript 1036517 1041610 . + . ID=LTnewLM_330033600.2;Parent=LTnewLM_330033600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1036709 1041610 . + . ID=LTnewLM_330033600.2:pseudogenic_exon:1;Parent=LTnewLM_330033600.2;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1036478 1041610 . + . ID=LTnewLM_330033600.1:pep;Derives_from=LTnewLM_330033600.1;orthologous_to=LTnewLM_330033600.2,LmjF.33.2450.1_mRNA,LmjF.33.2450.2_mRNA;ortholog_cluster=OG0000293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 1036709 1041610 . + . ID=LTnewLM_330033600.2:pep;Derives_from=LTnewLM_330033600.2;orthologous_to=LTnewLM_330033600.1,LmjF.33.2450.1_mRNA,LmjF.33.2450.2_mRNA;ortholog_cluster=OG0000293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1042309 1045464 1 + . ID=LTnewLM_330033700 LTnewLM_33 AUGUSTUS mRNA 1042309 1045464 1 + . ID=LTnewLM_330033700.1;Parent=LTnewLM_330033700 LTnewLM_33 AUGUSTUS CDS 1042309 1045464 1 + 0 ID=LTnewLM_330033700.1:CDS:1;Parent=LTnewLM_330033700.1 ### LTnewLM_33 . polypeptide 1042309 1045464 . + . ID=LTnewLM_330033700.1:pep;Derives_from=LTnewLM_330033700.1;orthologous_to=LmjF.33.2460_mRNA;ortholog_cluster=OG0005236;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1047780 1048979 1 + . ID=LTnewLM_330033800 LTnewLM_33 AUGUSTUS mRNA 1047780 1048979 1 + . ID=LTnewLM_330033800.1;Parent=LTnewLM_330033800 LTnewLM_33 AUGUSTUS CDS 1047780 1048979 1 + 0 ID=LTnewLM_330033800.1:CDS:1;Parent=LTnewLM_330033800.1 ### LTnewLM_33 . polypeptide 1047780 1048979 . + . ID=LTnewLM_330033800.1:pep;Derives_from=LTnewLM_330033800.1;orthologous_to=LmjF.33.2470_mRNA;ortholog_cluster=OG0005237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 1049643 1053152 . + . ID=LTnewLM_330033900:pseudogene;coverage=0.985;sequence_ID=0.890;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.2480_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1049643 1053152 . + . ID=LTnewLM_330033900.1;Parent=LTnewLM_330033900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1051280 1053152 . + . ID=LTnewLM_330033900.1:pseudogenic_exon:1;Parent=LTnewLM_330033900.1;extra_copy_number=0 LTnewLM_33 . pseudogenic_transcript 1051374 1053152 . + . ID=LTnewLM_330033900.2;Parent=LTnewLM_330033900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1051395 1053152 . + . ID=LTnewLM_330033900.2:pseudogenic_exon:1;Parent=LTnewLM_330033900.2;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1051280 1053152 . + . ID=LTnewLM_330033900.1:pep;Derives_from=LTnewLM_330033900.1;product=term%3Dhypothetical protein ### LTnewLM_33 . polypeptide 1051395 1053152 . + . ID=LTnewLM_330033900.2:pep;Derives_from=LTnewLM_330033900.2;orthologous_to=LmjF.33.2480.1_mRNA,LmjF.33.2480.2_mRNA;ortholog_cluster=OG0000541;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1053963 1056026 1 + . ID=LTnewLM_330034000 LTnewLM_33 AUGUSTUS mRNA 1053963 1056026 1 + . ID=LTnewLM_330034000.1;Parent=LTnewLM_330034000 LTnewLM_33 AUGUSTUS CDS 1053963 1056026 1 + 0 ID=LTnewLM_330034000.1:CDS:1;Parent=LTnewLM_330034000.1 ### LTnewLM_33 . polypeptide 1053963 1056026 . + . ID=LTnewLM_330034000.1:pep;Derives_from=LTnewLM_330034000.1;orthologous_to=LmjF.33.2490_mRNA;ortholog_cluster=OG0005238;product=term%3DRad51/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08423|Pfam:PF13481 LTnewLM_33 Pfam protein_match 1054623 1054847 . + . Parent=LTnewLM_330034000.1:pep;Name=PF08423;signature_desc=Rad51 LTnewLM_33 Pfam protein_match 1054641 1054859 . + . Parent=LTnewLM_330034000.1:pep;Name=PF13481;signature_desc=AAA domain ### LTnewLM_33 AUGUSTUS gene 1058865 1059824 1 + . ID=LTnewLM_330034100 LTnewLM_33 AUGUSTUS mRNA 1058865 1059824 1 + . ID=LTnewLM_330034100.1;Parent=LTnewLM_330034100 LTnewLM_33 AUGUSTUS CDS 1058865 1059824 1 + 0 ID=LTnewLM_330034100.1:CDS:1;Parent=LTnewLM_330034100.1 ### LTnewLM_33 . polypeptide 1058865 1059824 . + . ID=LTnewLM_330034100.1:pep;Derives_from=LTnewLM_330034100.1;orthologous_to=LmjF.33.2500_mRNA;ortholog_cluster=OG0005239;product=term%3DRadial spokehead-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04712 LTnewLM_33 Pfam protein_match 1058883 1059038 . + . Parent=LTnewLM_330034100.1:pep;Name=PF04712;signature_desc=Radial spokehead-like protein ### LTnewLM_33 AUGUSTUS gene 1060877 1063105 1 + . ID=LTnewLM_330034200 LTnewLM_33 AUGUSTUS mRNA 1060877 1063105 1 + . ID=LTnewLM_330034200.1;Parent=LTnewLM_330034200 LTnewLM_33 AUGUSTUS CDS 1060877 1063105 1 + 0 ID=LTnewLM_330034200.1:CDS:1;Parent=LTnewLM_330034200.1 ### LTnewLM_33 . polypeptide 1060877 1063105 . + . ID=LTnewLM_330034200.1:pep;Derives_from=LTnewLM_330034200.1;orthologous_to=LmjF.33.2510_mRNA;ortholog_cluster=OG0005240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1064694 1066409 1 + . ID=LTnewLM_330034300 LTnewLM_33 AUGUSTUS mRNA 1064694 1066409 1 + . ID=LTnewLM_330034300.1;Parent=LTnewLM_330034300 LTnewLM_33 AUGUSTUS CDS 1064694 1066409 1 + 0 ID=LTnewLM_330034300.1:CDS:1;Parent=LTnewLM_330034300.1 ### LTnewLM_33 . polypeptide 1064694 1066409 . + . ID=LTnewLM_330034300.1:pep;Derives_from=LTnewLM_330034300.1;orthologous_to=LmjF.33.2520_mRNA;ortholog_cluster=OG0005241;product=term%3DUTP--glucose-1-phosphate uridylyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01704;Ontology_term=GO:0008152,GO:0070569 LTnewLM_33 Pfam protein_match 1064931 1066145 . + . Parent=LTnewLM_330034300.1:pep;Name=PF01704;signature_desc=UTP--glucose-1-phosphate uridylyltransferase;Ontology_term=GO:0070569,GO:0008152 ### LTnewLM_33 AUGUSTUS gene 1068644 1072531 1 + . ID=LTnewLM_330034400 LTnewLM_33 AUGUSTUS mRNA 1068644 1072531 1 + . ID=LTnewLM_330034400.1;Parent=LTnewLM_330034400 LTnewLM_33 AUGUSTUS CDS 1068644 1072531 1 + 0 ID=LTnewLM_330034400.1:CDS:1;Parent=LTnewLM_330034400.1 ### LTnewLM_33 . polypeptide 1068644 1072531 . + . ID=LTnewLM_330034400.1:pep;Derives_from=LTnewLM_330034400.1;orthologous_to=LmjF.33.2530_mRNA;ortholog_cluster=OG0005242;product=term%3DNUC173 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08161 LTnewLM_33 Pfam protein_match 1069991 1070275 . + . Parent=LTnewLM_330034400.1:pep;Name=PF08161;signature_desc=NUC173 domain ### LTnewLM_33 AUGUSTUS gene 1073806 1075305 1 + . ID=LTnewLM_330034500 LTnewLM_33 AUGUSTUS mRNA 1073806 1075305 1 + . ID=LTnewLM_330034500.1;Parent=LTnewLM_330034500 LTnewLM_33 AUGUSTUS CDS 1073806 1075305 1 + 0 ID=LTnewLM_330034500.1:CDS:1;Parent=LTnewLM_330034500.1 ### LTnewLM_33 . polypeptide 1073806 1075305 . + . ID=LTnewLM_330034500.1:pep;Derives_from=LTnewLM_330034500.1;orthologous_to=LmjF.33.2540_mRNA;ortholog_cluster=OG0005243;product=term%3DCarboxypeptidase Taq (M32) metallopeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02074;Ontology_term=GO:0006508,GO:0004181 LTnewLM_33 Pfam protein_match 1073824 1075290 . + . Parent=LTnewLM_330034500.1:pep;Name=PF02074;signature_desc=Carboxypeptidase Taq (M32) metallopeptidase;Ontology_term=GO:0004181,GO:0006508 ### LTnewLM_33 AUGUSTUS gene 1076990 1078267 1 + . ID=LTnewLM_330034600 LTnewLM_33 AUGUSTUS mRNA 1076990 1078267 1 + . ID=LTnewLM_330034600.1;Parent=LTnewLM_330034600 LTnewLM_33 AUGUSTUS CDS 1076990 1078267 1 + 0 ID=LTnewLM_330034600.1:CDS:1;Parent=LTnewLM_330034600.1 ### LTnewLM_33 . polypeptide 1076990 1078267 . + . ID=LTnewLM_330034600.1:pep;Derives_from=LTnewLM_330034600.1;orthologous_to=LmjF.33.2550_mRNA;ortholog_cluster=OG0005244;product=term%3DIsocitrate/isopropylmalate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00180;Ontology_term=GO:0016616,GO:0055114 LTnewLM_33 Pfam protein_match 1077047 1078234 . + . Parent=LTnewLM_330034600.1:pep;Name=PF00180;signature_desc=Isocitrate/isopropylmalate dehydrogenase;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_33 AUGUSTUS gene 1084800 1091024 1 + . ID=LTnewLM_330034700 LTnewLM_33 AUGUSTUS mRNA 1084800 1091024 1 + . ID=LTnewLM_330034700.1;Parent=LTnewLM_330034700 LTnewLM_33 AUGUSTUS CDS 1084800 1091024 1 + 0 ID=LTnewLM_330034700.1:CDS:1;Parent=LTnewLM_330034700.1 ### LTnewLM_33 . polypeptide 1084800 1091024 . + . ID=LTnewLM_330034700.1:pep;Derives_from=LTnewLM_330034700.1;orthologous_to=LmjF.33.2560_mRNA;ortholog_cluster=OG0005245;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_33 Pfam protein_match 1084929 1086203 . + . Parent=LTnewLM_330034700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_33 Pfam protein_match 1085037 1085426 . + . Parent=LTnewLM_330034700.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_33 AUGUSTUS gene 1092171 1093754 1 + . ID=LTnewLM_330034800 LTnewLM_33 AUGUSTUS mRNA 1092171 1093754 1 + . ID=LTnewLM_330034800.1;Parent=LTnewLM_330034800 LTnewLM_33 AUGUSTUS CDS 1092171 1093754 1 + 0 ID=LTnewLM_330034800.1:CDS:1;Parent=LTnewLM_330034800.1 ### LTnewLM_33 . polypeptide 1092171 1093754 . + . ID=LTnewLM_330034800.1:pep;Derives_from=LTnewLM_330034800.1;orthologous_to=LmjF.33.2570_mRNA;ortholog_cluster=OG0005246;product=term%3DM17 aminopeptidase N-terminal domain 2/Cytosol aminopeptidase family%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18295|Pfam:PF00883;Ontology_term=GO:0005622,GO:0006508,GO:0004177 LTnewLM_33 Pfam protein_match 1092321 1092683 . + . Parent=LTnewLM_330034800.1:pep;Name=PF18295;signature_desc=M17 aminopeptidase N-terminal domain 2 LTnewLM_33 Pfam protein_match 1092786 1093721 . + . Parent=LTnewLM_330034800.1:pep;Name=PF00883;signature_desc=Cytosol aminopeptidase family%2C catalytic domain;Ontology_term=GO:0004177,GO:0006508,GO:0005622 ### LTnewLM_33 AUGUSTUS gene 1094806 1095105 1 + . ID=LTnewLM_330034900 LTnewLM_33 AUGUSTUS mRNA 1094806 1095105 1 + . ID=LTnewLM_330034900.1;Parent=LTnewLM_330034900 LTnewLM_33 AUGUSTUS CDS 1094806 1095105 1 + 0 ID=LTnewLM_330034900.1:CDS:1;Parent=LTnewLM_330034900.1 ### LTnewLM_33 . polypeptide 1094806 1095105 . + . ID=LTnewLM_330034900.1:pep;Derives_from=LTnewLM_330034900.1;orthologous_to=LmjF.33.2580_mRNA;ortholog_cluster=OG0005247;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 1095841 1097612 . + . ID=LTnewLM_330035000:pseudogene;coverage=1.0;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2585_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1095841 1097612 . + . ID=LTnewLM_330035000.1;Parent=LTnewLM_330035000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1095841 1097612 . + . ID=LTnewLM_330035000.1:pseudogenic_exon:1;Parent=LTnewLM_330035000.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1095841 1097612 . + . ID=LTnewLM_330035000.1:pep;Derives_from=LTnewLM_330035000.1;orthologous_to=LmjF.33.2585_mRNA;ortholog_cluster=OG0007638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1098250 1101714 1 + . ID=LTnewLM_330035100 LTnewLM_33 AUGUSTUS mRNA 1098250 1101714 1 + . ID=LTnewLM_330035100.1;Parent=LTnewLM_330035100 LTnewLM_33 AUGUSTUS CDS 1098250 1101714 1 + 0 ID=LTnewLM_330035100.1:CDS:1;Parent=LTnewLM_330035100.1 ### LTnewLM_33 . polypeptide 1098250 1101714 . + . ID=LTnewLM_330035100.1:pep;Derives_from=LTnewLM_330035100.1;orthologous_to=LmjF.33.2590_mRNA;ortholog_cluster=OG0005248;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1102780 1105584 1 + . ID=LTnewLM_330035200 LTnewLM_33 AUGUSTUS mRNA 1102780 1105584 1 + . ID=LTnewLM_330035200.1;Parent=LTnewLM_330035200 LTnewLM_33 AUGUSTUS CDS 1102780 1105584 1 + 0 ID=LTnewLM_330035200.1:CDS:1;Parent=LTnewLM_330035200.1 ### LTnewLM_33 . polypeptide 1102780 1105584 . + . ID=LTnewLM_330035200.1:pep;Derives_from=LTnewLM_330035200.1;orthologous_to=LmjF.33.2600_mRNA;ortholog_cluster=OG0005249;product=term%3DEnoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain/3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00378|Pfam:PF16113|Pfam:PF02737|Pfam:PF00725;Ontology_term=GO:0003824,GO:0016491,GO:0008152,GO:0006631,GO:0055114,GO:0003857 LTnewLM_33 Pfam protein_match 1102912 1103376 . + . Parent=LTnewLM_330035200.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_33 Pfam protein_match 1102915 1103376 . + . Parent=LTnewLM_330035200.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_33 Pfam protein_match 1104022 1104564 . + . Parent=LTnewLM_330035200.1:pep;Name=PF02737;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 LTnewLM_33 Pfam protein_match 1104583 1104774 . + . Parent=LTnewLM_330035200.1:pep;Name=PF00725;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 LTnewLM_33 Pfam protein_match 1105297 1105542 . + . Parent=LTnewLM_330035200.1:pep;Name=PF00725;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 ### LTnewLM_33 AUGUSTUS gene 1106763 1108214 1 + . ID=LTnewLM_330035300 LTnewLM_33 AUGUSTUS mRNA 1106763 1108214 1 + . ID=LTnewLM_330035300.1;Parent=LTnewLM_330035300 LTnewLM_33 AUGUSTUS CDS 1106763 1108214 1 + 0 ID=LTnewLM_330035300.1:CDS:1;Parent=LTnewLM_330035300.1 ### LTnewLM_33 . polypeptide 1106763 1108214 . + . ID=LTnewLM_330035300.1:pep;Derives_from=LTnewLM_330035300.1;orthologous_to=LmjF.33.2610_mRNA;ortholog_cluster=OG0005250;product=term%3DPeptidase M16 inactive domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05193 LTnewLM_33 Pfam protein_match 1107309 1107932 . + . Parent=LTnewLM_330035300.1:pep;Name=PF05193;signature_desc=Peptidase M16 inactive domain ### LTnewLM_33 AUGUSTUS gene 1109089 1110567 1 + . ID=LTnewLM_330035400 LTnewLM_33 AUGUSTUS mRNA 1109089 1110567 1 + . ID=LTnewLM_330035400.1;Parent=LTnewLM_330035400 LTnewLM_33 AUGUSTUS CDS 1109089 1110567 1 + 0 ID=LTnewLM_330035400.1:CDS:1;Parent=LTnewLM_330035400.1 ### LTnewLM_33 . polypeptide 1109089 1110567 . + . ID=LTnewLM_330035400.1:pep;Derives_from=LTnewLM_330035400.1;orthologous_to=LmjF.33.2620_mRNA;ortholog_cluster=OG0005251;product=term%3DSignal recognition particle receptor beta subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09439 LTnewLM_33 Pfam protein_match 1109788 1110285 . + . Parent=LTnewLM_330035400.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit ### LTnewLM_33 AUGUSTUS gene 1112405 1115650 1 + . ID=LTnewLM_330035500 LTnewLM_33 AUGUSTUS mRNA 1112405 1115650 1 + . ID=LTnewLM_330035500.1;Parent=LTnewLM_330035500 LTnewLM_33 AUGUSTUS CDS 1112405 1115650 1 + 0 ID=LTnewLM_330035500.1:CDS:1;Parent=LTnewLM_330035500.1 ### LTnewLM_33 . polypeptide 1112405 1115650 . + . ID=LTnewLM_330035500.1:pep;Derives_from=LTnewLM_330035500.1;orthologous_to=LmjF.33.2630_mRNA;ortholog_cluster=OG0005252;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1117271 1118560 1 + . ID=LTnewLM_330035600 LTnewLM_33 AUGUSTUS mRNA 1117271 1118560 1 + . ID=LTnewLM_330035600.1;Parent=LTnewLM_330035600 LTnewLM_33 AUGUSTUS CDS 1117271 1118560 1 + 0 ID=LTnewLM_330035600.1:CDS:1;Parent=LTnewLM_330035600.1 ### LTnewLM_33 . polypeptide 1117271 1118560 . + . ID=LTnewLM_330035600.1:pep;Derives_from=LTnewLM_330035600.1;orthologous_to=LmjF.33.2640_mRNA;ortholog_cluster=OG0005253;product=term%3DLIM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00412;Ontology_term=GO:0008270 LTnewLM_33 Pfam protein_match 1117976 1118131 . + . Parent=LTnewLM_330035600.1:pep;Name=PF00412;signature_desc=LIM domain;Ontology_term=GO:0008270 ### LTnewLM_33 AUGUSTUS gene 1120350 1122749 1 + . ID=LTnewLM_330035700 LTnewLM_33 AUGUSTUS mRNA 1120350 1122749 1 + . ID=LTnewLM_330035700.1;Parent=LTnewLM_330035700 LTnewLM_33 AUGUSTUS CDS 1120350 1122749 1 + 0 ID=LTnewLM_330035700.1:CDS:1;Parent=LTnewLM_330035700.1 ### LTnewLM_33 . polypeptide 1120350 1122749 . + . ID=LTnewLM_330035700.1:pep;Derives_from=LTnewLM_330035700.1;orthologous_to=LmjF.33.2650_mRNA;ortholog_cluster=OG0005254;product=term%3DThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899;Ontology_term=GO:0008641 LTnewLM_33 Pfam protein_match 1120425 1120703 . + . Parent=LTnewLM_330035700.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 ### LTnewLM_33 AUGUSTUS gene 1123293 1126793 1 + . ID=LTnewLM_330035800 LTnewLM_33 AUGUSTUS mRNA 1123293 1126793 1 + . ID=LTnewLM_330035800.1;Parent=LTnewLM_330035800 LTnewLM_33 AUGUSTUS CDS 1123293 1126793 1 + 0 ID=LTnewLM_330035800.1:CDS:1;Parent=LTnewLM_330035800.1 ### LTnewLM_33 . polypeptide 1123293 1126793 . + . ID=LTnewLM_330035800.1:pep;Derives_from=LTnewLM_330035800.1;orthologous_to=LmjF.33.2660_mRNA;ortholog_cluster=OG0005255;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1127603 1131277 1 + . ID=LTnewLM_330035900 LTnewLM_33 AUGUSTUS mRNA 1127603 1131277 1 + . ID=LTnewLM_330035900.1;Parent=LTnewLM_330035900 LTnewLM_33 AUGUSTUS CDS 1127603 1131277 1 + 0 ID=LTnewLM_330035900.1:CDS:1;Parent=LTnewLM_330035900.1 ### LTnewLM_33 . polypeptide 1127603 1131277 . + . ID=LTnewLM_330035900.1:pep;Derives_from=LTnewLM_330035900.1;orthologous_to=LmjF.33.2670_mRNA;ortholog_cluster=OG0005256;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1133208 1135709 1 + . ID=LTnewLM_330036000 LTnewLM_33 AUGUSTUS mRNA 1133208 1135709 1 + . ID=LTnewLM_330036000.1;Parent=LTnewLM_330036000 LTnewLM_33 AUGUSTUS CDS 1133208 1135709 1 + 0 ID=LTnewLM_330036000.1:CDS:1;Parent=LTnewLM_330036000.1 ### LTnewLM_33 . polypeptide 1133208 1135709 . + . ID=LTnewLM_330036000.1:pep;Derives_from=LTnewLM_330036000.1;orthologous_to=LmjF.33.2680_mRNA;ortholog_cluster=OG0005257;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1136485 1137285 1 + . ID=LTnewLM_330036100 LTnewLM_33 AUGUSTUS mRNA 1136485 1137285 1 + . ID=LTnewLM_330036100.1;Parent=LTnewLM_330036100 LTnewLM_33 AUGUSTUS CDS 1136485 1137285 1 + 0 ID=LTnewLM_330036100.1:CDS:1;Parent=LTnewLM_330036100.1 ### LTnewLM_33 . polypeptide 1136485 1137285 . + . ID=LTnewLM_330036100.1:pep;Derives_from=LTnewLM_330036100.1;orthologous_to=LmjF.33.2690_mRNA;ortholog_cluster=OG0005258;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_33 Pfam protein_match 1136719 1136862 . + . Parent=LTnewLM_330036100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_33 AUGUSTUS gene 1138130 1140775 1 + . ID=LTnewLM_330036200 LTnewLM_33 AUGUSTUS mRNA 1138130 1140775 1 + . ID=LTnewLM_330036200.1;Parent=LTnewLM_330036200 LTnewLM_33 AUGUSTUS CDS 1138130 1140775 1 + 0 ID=LTnewLM_330036200.1:CDS:1;Parent=LTnewLM_330036200.1 ### LTnewLM_33 . polypeptide 1138130 1140775 . + . ID=LTnewLM_330036200.1:pep;Derives_from=LTnewLM_330036200.1;orthologous_to=LmjF.33.2700_mRNA;ortholog_cluster=OG0005259;product=term%3DMCM OB domain/MCM P-loop domain/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17207|Pfam:PF00493|Pfam:PF01078|Pfam:PF17855;Ontology_term=GO:0015995,GO:0005524,GO:0015979,GO:0006260,GO:0016851,GO:0003677 LTnewLM_33 Pfam protein_match 1138538 1138936 . + . Parent=LTnewLM_330036200.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_33 Pfam protein_match 1139099 1139725 . + . Parent=LTnewLM_330036200.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_33 Pfam protein_match 1139378 1139575 . + . Parent=LTnewLM_330036200.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_33 Pfam protein_match 1139948 1140199 . + . Parent=LTnewLM_330036200.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_33 AUGUSTUS gene 1142122 1142622 1 + . ID=LTnewLM_330036300 LTnewLM_33 AUGUSTUS mRNA 1142122 1142622 1 + . ID=LTnewLM_330036300.1;Parent=LTnewLM_330036300 LTnewLM_33 AUGUSTUS CDS 1142122 1142622 1 + 0 ID=LTnewLM_330036300.1:CDS:1;Parent=LTnewLM_330036300.1 ### LTnewLM_33 . polypeptide 1142122 1142622 . + . ID=LTnewLM_330036300.1:pep;Derives_from=LTnewLM_330036300.1;orthologous_to=LmjF.33.2710_mRNA;ortholog_cluster=OG0005260;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_33 Pfam protein_match 1142239 1142391 . + . Parent=LTnewLM_330036300.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_33 AUGUSTUS gene 1143651 1145090 1 + . ID=LTnewLM_330036400 LTnewLM_33 AUGUSTUS mRNA 1143651 1145090 1 + . ID=LTnewLM_330036400.1;Parent=LTnewLM_330036400 LTnewLM_33 AUGUSTUS CDS 1143651 1145090 1 + 0 ID=LTnewLM_330036400.1:CDS:1;Parent=LTnewLM_330036400.1 ### LTnewLM_33 . polypeptide 1143651 1145090 . + . ID=LTnewLM_330036400.1:pep;Derives_from=LTnewLM_330036400.1;orthologous_to=LmjF.33.2720_mRNA;ortholog_cluster=OG0005261;product=term%3DBeta-ketoacyl synthase%2C N-terminal domain/Beta-ketoacyl synthase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00109|Pfam:PF02801 LTnewLM_33 Pfam protein_match 1143684 1144553 . + . Parent=LTnewLM_330036400.1:pep;Name=PF00109;signature_desc=Beta-ketoacyl synthase%2C N-terminal domain LTnewLM_33 Pfam protein_match 1144581 1144934 . + . Parent=LTnewLM_330036400.1:pep;Name=PF02801;signature_desc=Beta-ketoacyl synthase%2C C-terminal domain ### LTnewLM_33 AUGUSTUS gene 1154457 1155893 1 + . ID=LTnewLM_330036500 LTnewLM_33 AUGUSTUS mRNA 1154457 1155893 1 + . ID=LTnewLM_330036500.1;Parent=LTnewLM_330036500 LTnewLM_33 AUGUSTUS CDS 1154457 1155893 1 + 0 ID=LTnewLM_330036500.1:CDS:1;Parent=LTnewLM_330036500.1 ### LTnewLM_33 . polypeptide 1154457 1155893 . + . ID=LTnewLM_330036500.1:pep;Derives_from=LTnewLM_330036500.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1165224 1166831 1 + . ID=LTnewLM_330036600 LTnewLM_33 AUGUSTUS mRNA 1165224 1166831 1 + . ID=LTnewLM_330036600.1;Parent=LTnewLM_330036600 LTnewLM_33 AUGUSTUS CDS 1165224 1166831 1 + 0 ID=LTnewLM_330036600.1:CDS:1;Parent=LTnewLM_330036600.1 ### LTnewLM_33 . polypeptide 1165224 1166831 . + . ID=LTnewLM_330036600.1:pep;Derives_from=LTnewLM_330036600.1;orthologous_to=LmjF.33.2730_mRNA;ortholog_cluster=OG0005262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1168825 1171278 1 + . ID=LTnewLM_330036700 LTnewLM_33 AUGUSTUS mRNA 1168825 1171278 1 + . ID=LTnewLM_330036700.1;Parent=LTnewLM_330036700 LTnewLM_33 AUGUSTUS CDS 1168825 1171278 1 + 0 ID=LTnewLM_330036700.1:CDS:1;Parent=LTnewLM_330036700.1 ### LTnewLM_33 . polypeptide 1168825 1171278 . + . ID=LTnewLM_330036700.1:pep;Derives_from=LTnewLM_330036700.1;orthologous_to=LmjF.33.2740_mRNA;ortholog_cluster=OG0005263;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Elongation factor Tu domain 2/Translation-initiation factor 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF03144|Pfam:PF11987;Ontology_term=GO:0003924,GO:0005525 LTnewLM_33 Pfam protein_match 1169509 1170132 . + . Parent=LTnewLM_330036700.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_33 Pfam protein_match 1169512 1169880 . + . Parent=LTnewLM_330036700.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 1170220 1170444 . + . Parent=LTnewLM_330036700.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_33 Pfam protein_match 1170514 1170816 . + . Parent=LTnewLM_330036700.1:pep;Name=PF11987;signature_desc=Translation-initiation factor 2 ### LTnewLM_33 AUGUSTUS gene 1173533 1176949 1 + . ID=LTnewLM_330036800 LTnewLM_33 AUGUSTUS mRNA 1173533 1176949 1 + . ID=LTnewLM_330036800.1;Parent=LTnewLM_330036800 LTnewLM_33 AUGUSTUS CDS 1173533 1176949 1 + 0 ID=LTnewLM_330036800.1:CDS:1;Parent=LTnewLM_330036800.1 ### LTnewLM_33 . polypeptide 1173533 1176949 . + . ID=LTnewLM_330036800.1:pep;Derives_from=LTnewLM_330036800.1;orthologous_to=LmjF.33.2750_mRNA;ortholog_cluster=OG0005264;product=term%3DDomain of unknown function (DUF4520)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15016 LTnewLM_33 Pfam protein_match 1176059 1176307 . + . Parent=LTnewLM_330036800.1:pep;Name=PF15016;signature_desc=Domain of unknown function (DUF4520) ### LTnewLM_33 AUGUSTUS gene 1178010 1180691 1 + . ID=LTnewLM_330036900 LTnewLM_33 AUGUSTUS mRNA 1178010 1180691 1 + . ID=LTnewLM_330036900.1;Parent=LTnewLM_330036900 LTnewLM_33 AUGUSTUS CDS 1178010 1180691 1 + 0 ID=LTnewLM_330036900.1:CDS:1;Parent=LTnewLM_330036900.1 ### LTnewLM_33 . polypeptide 1178010 1180691 . + . ID=LTnewLM_330036900.1:pep;Derives_from=LTnewLM_330036900.1;orthologous_to=LmjF.33.2760_mRNA;ortholog_cluster=OG0005265;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1181913 1182638 1 + . ID=LTnewLM_330037000 LTnewLM_33 AUGUSTUS mRNA 1181913 1182638 1 + . ID=LTnewLM_330037000.1;Parent=LTnewLM_330037000 LTnewLM_33 AUGUSTUS CDS 1181913 1182638 1 + 0 ID=LTnewLM_330037000.1:CDS:1;Parent=LTnewLM_330037000.1 ### LTnewLM_33 . polypeptide 1181913 1182638 . + . ID=LTnewLM_330037000.1:pep;Derives_from=LTnewLM_330037000.1;orthologous_to=LmjF.33.2770_mRNA;ortholog_cluster=OG0005266;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_33 Pfam protein_match 1181943 1182344 . + . Parent=LTnewLM_330037000.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_33 AUGUSTUS gene 1186192 1201450 0.66 + . ID=LTnewLM_330037100 LTnewLM_33 AUGUSTUS mRNA 1186192 1201450 0.66 + . ID=LTnewLM_330037100.1;Parent=LTnewLM_330037100 LTnewLM_33 AUGUSTUS CDS 1186192 1194841 0.68 + 0 ID=LTnewLM_330037100.1:CDS:1;Parent=LTnewLM_330037100.1 LTnewLM_33 AUGUSTUS CDS 1194894 1201450 0.66 + 2 ID=LTnewLM_330037100.1:CDS:2;Parent=LTnewLM_330037100.1 ### LTnewLM_33 . polypeptide 1186192 1201450 . + . ID=LTnewLM_330037100.1:pep;Derives_from=LTnewLM_330037100.1;orthologous_to=LmjF.33.2780_mRNA;ortholog_cluster=OG0005267;product=term%3DConcanavalin A-like lectin/glucanases superfamily/Beige/BEACH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13385|Pfam:PF02138 LTnewLM_33 Pfam protein_match 1191184 1191549 . + . Parent=LTnewLM_330037100.1:pep;Name=PF13385;signature_desc=Concanavalin A-like lectin/glucanases superfamily LTnewLM_33 Pfam protein_match 1198780 1199628 . + . Parent=LTnewLM_330037100.1:pep;Name=PF02138;signature_desc=Beige/BEACH domain ### LTnewLM_33 AUGUSTUS gene 1202515 1205034 1 + . ID=LTnewLM_330037200 LTnewLM_33 AUGUSTUS mRNA 1202515 1205034 1 + . ID=LTnewLM_330037200.1;Parent=LTnewLM_330037200 LTnewLM_33 AUGUSTUS CDS 1202515 1205034 1 + 0 ID=LTnewLM_330037200.1:CDS:1;Parent=LTnewLM_330037200.1 ### LTnewLM_33 . polypeptide 1202515 1205034 . + . ID=LTnewLM_330037200.1:pep;Derives_from=LTnewLM_330037200.1;orthologous_to=LmjF.33.2790_mRNA;ortholog_cluster=OG0005268;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_33 Pfam protein_match 1203580 1204356 . + . Parent=LTnewLM_330037200.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_33 Pfam protein_match 1204684 1204941 . + . Parent=LTnewLM_330037200.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 ### LTnewLM_33 AUGUSTUS gene 1207089 1207544 1 + . ID=LTnewLM_330037300 LTnewLM_33 AUGUSTUS mRNA 1207089 1207544 1 + . ID=LTnewLM_330037300.1;Parent=LTnewLM_330037300 LTnewLM_33 AUGUSTUS CDS 1207089 1207544 1 + 0 ID=LTnewLM_330037300.1:CDS:1;Parent=LTnewLM_330037300.1 ### LTnewLM_33 . polypeptide 1207089 1207544 . + . ID=LTnewLM_330037300.1:pep;Derives_from=LTnewLM_330037300.1;orthologous_to=LmjF.33.2800_mRNA;ortholog_cluster=OG0005269;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1209222 1210643 1 + . ID=LTnewLM_330037400 LTnewLM_33 AUGUSTUS mRNA 1209222 1210643 1 + . ID=LTnewLM_330037400.1;Parent=LTnewLM_330037400 LTnewLM_33 AUGUSTUS CDS 1209222 1210643 1 + 0 ID=LTnewLM_330037400.1:CDS:1;Parent=LTnewLM_330037400.1 ### LTnewLM_33 . polypeptide 1209222 1210643 . + . ID=LTnewLM_330037400.1:pep;Derives_from=LTnewLM_330037400.1;orthologous_to=LmjF.33.2810_mRNA;ortholog_cluster=OG0005270;product=term%3DTranscription factor S-II (TFIIS)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01096;Ontology_term=GO:0006351,GO:0008270,GO:0003676 LTnewLM_33 Pfam protein_match 1210518 1210631 . + . Parent=LTnewLM_330037400.1:pep;Name=PF01096;signature_desc=Transcription factor S-II (TFIIS);Ontology_term=GO:0003676,GO:0008270,GO:0006351 ### LTnewLM_33 AUGUSTUS gene 1212223 1214004 1 + . ID=LTnewLM_330037500 LTnewLM_33 AUGUSTUS mRNA 1212223 1214004 1 + . ID=LTnewLM_330037500.1;Parent=LTnewLM_330037500 LTnewLM_33 AUGUSTUS CDS 1212223 1214004 1 + 0 ID=LTnewLM_330037500.1:CDS:1;Parent=LTnewLM_330037500.1 ### LTnewLM_33 . polypeptide 1212223 1214004 . + . ID=LTnewLM_330037500.1:pep;Derives_from=LTnewLM_330037500.1;orthologous_to=LmjF.33.2820_mRNA;ortholog_cluster=OG0005271;product=term%3DPWWP domain/TFIIS helical bundle-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00855|Pfam:PF08711;Ontology_term=GO:0006351,GO:0005634,GO:0003677 LTnewLM_33 Pfam protein_match 1212259 1212519 . + . Parent=LTnewLM_330037500.1:pep;Name=PF00855;signature_desc=PWWP domain LTnewLM_33 Pfam protein_match 1213189 1213326 . + . Parent=LTnewLM_330037500.1:pep;Name=PF08711;signature_desc=TFIIS helical bundle-like domain;Ontology_term=GO:0003677,GO:0006351,GO:0005634 ### LTnewLM_33 Liftoff gene 1215601 1216773 . + . ID=LTnewLM_330037600;coverage=1.0;sequence_ID=0.871;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.2830_0 LTnewLM_33 Liftoff mRNA 1215601 1216773 . + . ID=LTnewLM_330037600.1;Parent=LTnewLM_330037600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 1215601 1216773 . + 0 ID=LTnewLM_330037600.1:CDS:1;Parent=LTnewLM_330037600.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1215601 1216773 . + . ID=LTnewLM_330037600.1:pep;Derives_from=LTnewLM_330037600.1;orthologous_to=LmjF.33.2830_mRNA;ortholog_cluster=OG0005272;product=term%3DCHAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257 LTnewLM_33 Pfam protein_match 1216309 1216635 . + . Parent=LTnewLM_330037600.1:pep;Name=PF05257;signature_desc=CHAP domain ### LTnewLM_33 AUGUSTUS gene 1219646 1220962 1 + . ID=LTnewLM_330037700 LTnewLM_33 AUGUSTUS mRNA 1219646 1220962 1 + . ID=LTnewLM_330037700.1;Parent=LTnewLM_330037700 LTnewLM_33 AUGUSTUS CDS 1219646 1220962 1 + 0 ID=LTnewLM_330037700.1:CDS:1;Parent=LTnewLM_330037700.1 ### LTnewLM_33 . polypeptide 1219646 1220962 . + . ID=LTnewLM_330037700.1:pep;Derives_from=LTnewLM_330037700.1;orthologous_to=LmjF.33.2835_mRNA;ortholog_cluster=OG0005273;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1223549 1224010 1 + . ID=LTnewLM_330037800 LTnewLM_33 AUGUSTUS mRNA 1223549 1224010 1 + . ID=LTnewLM_330037800.1;Parent=LTnewLM_330037800 LTnewLM_33 AUGUSTUS CDS 1223549 1224010 1 + 0 ID=LTnewLM_330037800.1:CDS:1;Parent=LTnewLM_330037800.1 ### LTnewLM_33 . polypeptide 1223549 1224010 . + . ID=LTnewLM_330037800.1:pep;Derives_from=LTnewLM_330037800.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1224858 1225634 0.92 + . ID=LTnewLM_330037900 LTnewLM_33 AUGUSTUS mRNA 1224858 1225634 0.92 + . ID=LTnewLM_330037900.1;Parent=LTnewLM_330037900 LTnewLM_33 AUGUSTUS CDS 1224858 1225424 0.99 + 0 ID=LTnewLM_330037900.1:CDS:1;Parent=LTnewLM_330037900.1 LTnewLM_33 AUGUSTUS CDS 1225566 1225634 0.93 + 0 ID=LTnewLM_330037900.1:CDS:2;Parent=LTnewLM_330037900.1 ### LTnewLM_33 . polypeptide 1224858 1225634 . + . ID=LTnewLM_330037900.1:pep;Derives_from=LTnewLM_330037900.1;orthologous_to=LmjF.33.2840_mRNA;ortholog_cluster=OG0005274;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13350 LTnewLM_33 Pfam protein_match 1224891 1225421 . + . Parent=LTnewLM_330037900.1:pep;Name=PF13350;signature_desc=Tyrosine phosphatase family ### LTnewLM_33 AUGUSTUS gene 1227006 1228220 1 + . ID=LTnewLM_330038000 LTnewLM_33 AUGUSTUS mRNA 1227006 1228220 1 + . ID=LTnewLM_330038000.1;Parent=LTnewLM_330038000 LTnewLM_33 AUGUSTUS CDS 1227006 1228220 1 + 0 ID=LTnewLM_330038000.1:CDS:1;Parent=LTnewLM_330038000.1 ### LTnewLM_33 . polypeptide 1227006 1228220 . + . ID=LTnewLM_330038000.1:pep;Derives_from=LTnewLM_330038000.1;orthologous_to=LmjF.33.2850_mRNA;ortholog_cluster=OG0005275;product=term%3DCHAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257 LTnewLM_33 Pfam protein_match 1227669 1227962 . + . Parent=LTnewLM_330038000.1:pep;Name=PF05257;signature_desc=CHAP domain ### LTnewLM_33 AUGUSTUS gene 1229646 1231097 1 + . ID=LTnewLM_330038100 LTnewLM_33 AUGUSTUS mRNA 1229646 1231097 1 + . ID=LTnewLM_330038100.1;Parent=LTnewLM_330038100 LTnewLM_33 AUGUSTUS CDS 1229646 1231097 1 + 0 ID=LTnewLM_330038100.1:CDS:1;Parent=LTnewLM_330038100.1 ### LTnewLM_33 . polypeptide 1229646 1231097 . + . ID=LTnewLM_330038100.1:pep;Derives_from=LTnewLM_330038100.1;orthologous_to=LmjF.33.2860_mRNA;ortholog_cluster=OG0005276;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1232421 1232768 1 + . ID=LTnewLM_330038200 LTnewLM_33 AUGUSTUS mRNA 1232421 1232768 1 + . ID=LTnewLM_330038200.1;Parent=LTnewLM_330038200 LTnewLM_33 AUGUSTUS CDS 1232421 1232768 1 + 0 ID=LTnewLM_330038200.1:CDS:1;Parent=LTnewLM_330038200.1 ### LTnewLM_33 . polypeptide 1232421 1232768 . + . ID=LTnewLM_330038200.1:pep;Derives_from=LTnewLM_330038200.1;orthologous_to=LmjF.33.2870_mRNA;ortholog_cluster=OG0005277;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1233469 1234713 1 + . ID=LTnewLM_330038300 LTnewLM_33 AUGUSTUS mRNA 1233469 1234713 1 + . ID=LTnewLM_330038300.1;Parent=LTnewLM_330038300 LTnewLM_33 AUGUSTUS CDS 1233469 1234713 1 + 0 ID=LTnewLM_330038300.1:CDS:1;Parent=LTnewLM_330038300.1 ### LTnewLM_33 . polypeptide 1233469 1234713 . + . ID=LTnewLM_330038300.1:pep;Derives_from=LTnewLM_330038300.1;orthologous_to=LmjF.33.2880_mRNA;ortholog_cluster=OG0005278;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1235481 1235786 1 + . ID=LTnewLM_330038400 LTnewLM_33 AUGUSTUS mRNA 1235481 1235786 1 + . ID=LTnewLM_330038400.1;Parent=LTnewLM_330038400 LTnewLM_33 AUGUSTUS CDS 1235481 1235786 1 + 0 ID=LTnewLM_330038400.1:CDS:1;Parent=LTnewLM_330038400.1 ### LTnewLM_33 . polypeptide 1235481 1235786 . + . ID=LTnewLM_330038400.1:pep;Derives_from=LTnewLM_330038400.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1241001 1241654 1 + . ID=LTnewLM_330038500 LTnewLM_33 AUGUSTUS mRNA 1241001 1241654 1 + . ID=LTnewLM_330038500.1;Parent=LTnewLM_330038500 LTnewLM_33 AUGUSTUS CDS 1241001 1241654 1 + 0 ID=LTnewLM_330038500.1:CDS:1;Parent=LTnewLM_330038500.1 ### LTnewLM_33 . polypeptide 1241001 1241654 . + . ID=LTnewLM_330038500.1:pep;Derives_from=LTnewLM_330038500.1;orthologous_to=LTnewLM_330038700.1;ortholog_cluster=OG0005279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1252187 1252864 1 + . ID=LTnewLM_330038600 LTnewLM_33 AUGUSTUS mRNA 1252187 1252864 1 + . ID=LTnewLM_330038600.1;Parent=LTnewLM_330038600 LTnewLM_33 AUGUSTUS CDS 1252187 1252864 1 + 0 ID=LTnewLM_330038600.1:CDS:1;Parent=LTnewLM_330038600.1 ### LTnewLM_33 . polypeptide 1252187 1252864 . + . ID=LTnewLM_330038600.1:pep;Derives_from=LTnewLM_330038600.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1260060 1260713 1 + . ID=LTnewLM_330038700 LTnewLM_33 AUGUSTUS mRNA 1260060 1260713 1 + . ID=LTnewLM_330038700.1;Parent=LTnewLM_330038700 LTnewLM_33 AUGUSTUS CDS 1260060 1260713 1 + 0 ID=LTnewLM_330038700.1:CDS:1;Parent=LTnewLM_330038700.1 ### LTnewLM_33 . polypeptide 1260060 1260713 . + . ID=LTnewLM_330038700.1:pep;Derives_from=LTnewLM_330038700.1;orthologous_to=LTnewLM_330038500.1;ortholog_cluster=OG0005279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1265832 1266161 0.7 + . ID=LTnewLM_330038800 LTnewLM_33 AUGUSTUS mRNA 1265832 1266161 0.7 + . ID=LTnewLM_330038800.1;Parent=LTnewLM_330038800 LTnewLM_33 AUGUSTUS CDS 1265832 1266161 0.7 + 0 ID=LTnewLM_330038800.1:CDS:1;Parent=LTnewLM_330038800.1 ### LTnewLM_33 . polypeptide 1265832 1266161 . + . ID=LTnewLM_330038800.1:pep;Derives_from=LTnewLM_330038800.1;orthologous_to=LTnewLM_310028500.1;ortholog_cluster=OG0004533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1276657 1284879 1 + . ID=LTnewLM_330038900 LTnewLM_33 AUGUSTUS mRNA 1276657 1284879 1 + . ID=LTnewLM_330038900.1;Parent=LTnewLM_330038900 LTnewLM_33 AUGUSTUS CDS 1276657 1284879 1 + 0 ID=LTnewLM_330038900.1:CDS:1;Parent=LTnewLM_330038900.1 ### LTnewLM_33 . polypeptide 1276657 1284879 . + . ID=LTnewLM_330038900.1:pep;Derives_from=LTnewLM_330038900.1;orthologous_to=LmjF.33.2890_mRNA;ortholog_cluster=OG0005280;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1290381 1298474 1 + . ID=LTnewLM_330039000 LTnewLM_33 AUGUSTUS mRNA 1290381 1298474 1 + . ID=LTnewLM_330039000.1;Parent=LTnewLM_330039000 LTnewLM_33 AUGUSTUS CDS 1290381 1298474 1 + 0 ID=LTnewLM_330039000.1:CDS:1;Parent=LTnewLM_330039000.1 ### LTnewLM_33 . polypeptide 1290381 1298474 . + . ID=LTnewLM_330039000.1:pep;Derives_from=LTnewLM_330039000.1;orthologous_to=LmjF.33.2900_mRNA;ortholog_cluster=OG0005281;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1301518 1306299 1 + . ID=LTnewLM_330039100 LTnewLM_33 AUGUSTUS mRNA 1301518 1306299 1 + . ID=LTnewLM_330039100.1;Parent=LTnewLM_330039100 LTnewLM_33 AUGUSTUS CDS 1301518 1306299 1 + 0 ID=LTnewLM_330039100.1:CDS:1;Parent=LTnewLM_330039100.1 ### LTnewLM_33 . polypeptide 1301518 1306299 . + . ID=LTnewLM_330039100.1:pep;Derives_from=LTnewLM_330039100.1;orthologous_to=LTnewLM_330039400.1,LmjF.33.2930_mRNA;ortholog_cluster=OG0000452;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1311091 1316910 1 + . ID=LTnewLM_330039200 LTnewLM_33 AUGUSTUS mRNA 1311091 1316910 1 + . ID=LTnewLM_330039200.1;Parent=LTnewLM_330039200 LTnewLM_33 AUGUSTUS CDS 1311091 1316910 1 + 0 ID=LTnewLM_330039200.1:CDS:1;Parent=LTnewLM_330039200.1 ### LTnewLM_33 . polypeptide 1311091 1316910 . + . ID=LTnewLM_330039200.1:pep;Derives_from=LTnewLM_330039200.1;orthologous_to=LmjF.33.2910_mRNA;ortholog_cluster=OG0005282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1322230 1323150 1 + . ID=LTnewLM_330039300 LTnewLM_33 AUGUSTUS mRNA 1322230 1323150 1 + . ID=LTnewLM_330039300.1;Parent=LTnewLM_330039300 LTnewLM_33 AUGUSTUS CDS 1322230 1323150 1 + 0 ID=LTnewLM_330039300.1:CDS:1;Parent=LTnewLM_330039300.1 ### LTnewLM_33 . polypeptide 1322230 1323150 . + . ID=LTnewLM_330039300.1:pep;Derives_from=LTnewLM_330039300.1;orthologous_to=LmjF.33.2920_mRNA;ortholog_cluster=OG0005283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1330317 1334795 1 + . ID=LTnewLM_330039400 LTnewLM_33 AUGUSTUS mRNA 1330317 1334795 1 + . ID=LTnewLM_330039400.1;Parent=LTnewLM_330039400 LTnewLM_33 AUGUSTUS CDS 1330317 1334795 1 + 0 ID=LTnewLM_330039400.1:CDS:1;Parent=LTnewLM_330039400.1 ### LTnewLM_33 . polypeptide 1330317 1334795 . + . ID=LTnewLM_330039400.1:pep;Derives_from=LTnewLM_330039400.1;orthologous_to=LTnewLM_330039100.1,LmjF.33.2930_mRNA;ortholog_cluster=OG0000452;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1338057 1340429 1 + . ID=LTnewLM_330039500 LTnewLM_33 AUGUSTUS mRNA 1338057 1340429 1 + . ID=LTnewLM_330039500.1;Parent=LTnewLM_330039500 LTnewLM_33 AUGUSTUS CDS 1338057 1340429 1 + 0 ID=LTnewLM_330039500.1:CDS:1;Parent=LTnewLM_330039500.1 ### LTnewLM_33 . polypeptide 1338057 1340429 . + . ID=LTnewLM_330039500.1:pep;Derives_from=LTnewLM_330039500.1;orthologous_to=LTnewLM_330039700.1,LmjF.33.2940_mRNA,LmjF.33.2960_mRNA;ortholog_cluster=OG0000239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 Liftoff gene 1345559 1345786 . + . ID=LTnewLM_330039600;coverage=0.95;sequence_ID=0.895;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.2955_0 LTnewLM_33 Liftoff mRNA 1345559 1345786 . + . ID=LTnewLM_330039600.1;Parent=LTnewLM_330039600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 Liftoff CDS 1345559 1345786 . + 0 ID=LTnewLM_330039600.1:CDS:1;Parent=LTnewLM_330039600.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1345559 1345786 . + . ID=LTnewLM_330039600.1:pep;Derives_from=LTnewLM_330039600.1;orthologous_to=LmjF.33.2955_mRNA;ortholog_cluster=OG0005284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 1346978 1349430 . + . ID=LTnewLM_330039700:pseudogene;coverage=0.976;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.2960_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1346978 1349430 . + . ID=LTnewLM_330039700.1;Parent=LTnewLM_330039700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1346978 1349430 . + . ID=LTnewLM_330039700.1:pseudogenic_exon:1;Parent=LTnewLM_330039700.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1346978 1349430 . + . ID=LTnewLM_330039700.1:pep;Derives_from=LTnewLM_330039700.1;orthologous_to=LTnewLM_330039500.1,LmjF.33.2940_mRNA,LmjF.33.2960_mRNA;ortholog_cluster=OG0000239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1355852 1360585 1 + . ID=LTnewLM_330039800 LTnewLM_33 AUGUSTUS mRNA 1355852 1360585 1 + . ID=LTnewLM_330039800.1;Parent=LTnewLM_330039800 LTnewLM_33 AUGUSTUS CDS 1355852 1360585 1 + 0 ID=LTnewLM_330039800.1:CDS:1;Parent=LTnewLM_330039800.1 ### LTnewLM_33 . polypeptide 1355852 1360585 . + . ID=LTnewLM_330039800.1:pep;Derives_from=LTnewLM_330039800.1;orthologous_to=LmjF.33.2970_mRNA;ortholog_cluster=OG0005285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1361833 1365456 1 + . ID=LTnewLM_330039900 LTnewLM_33 AUGUSTUS mRNA 1361833 1365456 1 + . ID=LTnewLM_330039900.1;Parent=LTnewLM_330039900 LTnewLM_33 AUGUSTUS CDS 1361833 1365456 1 + 0 ID=LTnewLM_330039900.1:CDS:1;Parent=LTnewLM_330039900.1 ### LTnewLM_33 . polypeptide 1361833 1365456 . + . ID=LTnewLM_330039900.1:pep;Derives_from=LTnewLM_330039900.1;orthologous_to=LmjF.33.2980_mRNA;ortholog_cluster=OG0005286;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1371969 1372970 1 + . ID=LTnewLM_330040000 LTnewLM_33 AUGUSTUS mRNA 1371969 1372970 1 + . ID=LTnewLM_330040000.1;Parent=LTnewLM_330040000 LTnewLM_33 AUGUSTUS CDS 1371969 1372970 1 + 0 ID=LTnewLM_330040000.1:CDS:1;Parent=LTnewLM_330040000.1 ### LTnewLM_33 . polypeptide 1371969 1372970 . + . ID=LTnewLM_330040000.1:pep;Derives_from=LTnewLM_330040000.1;orthologous_to=LmjF.33.2990_mRNA;ortholog_cluster=OG0005287;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1377787 1380945 1 + . ID=LTnewLM_330040100 LTnewLM_33 AUGUSTUS mRNA 1377787 1380945 1 + . ID=LTnewLM_330040100.1;Parent=LTnewLM_330040100 LTnewLM_33 AUGUSTUS CDS 1377787 1380945 1 + 0 ID=LTnewLM_330040100.1:CDS:1;Parent=LTnewLM_330040100.1 ### LTnewLM_33 . polypeptide 1377787 1380945 . + . ID=LTnewLM_330040100.1:pep;Derives_from=LTnewLM_330040100.1;orthologous_to=LmjF.33.3000_mRNA;ortholog_cluster=OG0005288;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1387111 1390449 1 + . ID=LTnewLM_330040200 LTnewLM_33 AUGUSTUS mRNA 1387111 1390449 1 + . ID=LTnewLM_330040200.1;Parent=LTnewLM_330040200 LTnewLM_33 AUGUSTUS CDS 1387111 1390449 1 + 0 ID=LTnewLM_330040200.1:CDS:1;Parent=LTnewLM_330040200.1 ### LTnewLM_33 . polypeptide 1387111 1390449 . + . ID=LTnewLM_330040200.1:pep;Derives_from=LTnewLM_330040200.1;orthologous_to=LmjF.33.3010_mRNA;ortholog_cluster=OG0005289;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1396110 1399019 1 + . ID=LTnewLM_330040300 LTnewLM_33 AUGUSTUS mRNA 1396110 1399019 1 + . ID=LTnewLM_330040300.1;Parent=LTnewLM_330040300 LTnewLM_33 AUGUSTUS CDS 1396110 1399019 1 + 0 ID=LTnewLM_330040300.1:CDS:1;Parent=LTnewLM_330040300.1 ### LTnewLM_33 . polypeptide 1396110 1399019 . + . ID=LTnewLM_330040300.1:pep;Derives_from=LTnewLM_330040300.1;orthologous_to=LmjF.33.3020_mRNA;ortholog_cluster=OG0005290;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1407298 1410525 1 + . ID=LTnewLM_330040400 LTnewLM_33 AUGUSTUS mRNA 1407298 1410525 1 + . ID=LTnewLM_330040400.1;Parent=LTnewLM_330040400 LTnewLM_33 AUGUSTUS CDS 1407298 1410525 1 + 0 ID=LTnewLM_330040400.1:CDS:1;Parent=LTnewLM_330040400.1 ### LTnewLM_33 . polypeptide 1407298 1410525 . + . ID=LTnewLM_330040400.1:pep;Derives_from=LTnewLM_330040400.1;orthologous_to=LmjF.33.3030_mRNA;ortholog_cluster=OG0005291;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1411315 1411567 0.45 + . ID=LTnewLM_330040500 LTnewLM_33 AUGUSTUS mRNA 1411315 1411567 0.45 + . ID=LTnewLM_330040500.1;Parent=LTnewLM_330040500 LTnewLM_33 AUGUSTUS CDS 1411315 1411459 0.45 + 0 ID=LTnewLM_330040500.1:CDS:1;Parent=LTnewLM_330040500.1 LTnewLM_33 AUGUSTUS CDS 1411509 1411567 0.45 + 2 ID=LTnewLM_330040500.1:CDS:2;Parent=LTnewLM_330040500.1 ### LTnewLM_33 . polypeptide 1411315 1411567 . + . ID=LTnewLM_330040500.1:pep;Derives_from=LTnewLM_330040500.1;product=term%3Dhypothetical protein ### LTnewLM_33 AUGUSTUS gene 1411606 1415619 1 + . ID=LTnewLM_330040600 LTnewLM_33 AUGUSTUS mRNA 1411606 1415619 1 + . ID=LTnewLM_330040600.1;Parent=LTnewLM_330040600 LTnewLM_33 AUGUSTUS CDS 1411606 1415619 1 + 0 ID=LTnewLM_330040600.1:CDS:1;Parent=LTnewLM_330040600.1 ### LTnewLM_33 . polypeptide 1411606 1415619 . + . ID=LTnewLM_330040600.1:pep;Derives_from=LTnewLM_330040600.1;orthologous_to=LmjF.33.3040_mRNA;ortholog_cluster=OG0005292;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1416444 1418492 1 + . ID=LTnewLM_330040700 LTnewLM_33 AUGUSTUS mRNA 1416444 1418492 1 + . ID=LTnewLM_330040700.1;Parent=LTnewLM_330040700 LTnewLM_33 AUGUSTUS CDS 1416444 1418492 1 + 0 ID=LTnewLM_330040700.1:CDS:1;Parent=LTnewLM_330040700.1 ### LTnewLM_33 . polypeptide 1416444 1418492 . + . ID=LTnewLM_330040700.1:pep;Derives_from=LTnewLM_330040700.1;orthologous_to=LmjF.33.3050_mRNA;ortholog_cluster=OG0005293;product=term%3DTyrosyl-DNA phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06087;Ontology_term=GO:0008081,GO:0006281,GO:0005634 LTnewLM_33 Pfam protein_match 1416558 1418222 . + . Parent=LTnewLM_330040700.1:pep;Name=PF06087;signature_desc=Tyrosyl-DNA phosphodiesterase;Ontology_term=GO:0008081,GO:0006281,GO:0005634 ### LTnewLM_33 AUGUSTUS gene 1420196 1420420 1 + . ID=LTnewLM_330040800 LTnewLM_33 AUGUSTUS mRNA 1420196 1420420 1 + . ID=LTnewLM_330040800.1;Parent=LTnewLM_330040800 LTnewLM_33 AUGUSTUS CDS 1420196 1420420 1 + 0 ID=LTnewLM_330040800.1:CDS:1;Parent=LTnewLM_330040800.1 ### LTnewLM_33 . polypeptide 1420196 1420420 . + . ID=LTnewLM_330040800.1:pep;Derives_from=LTnewLM_330040800.1;product=term%3Dhypothetical protein ### LTnewLM_33 . pseudogene 1421352 1422568 . + . ID=LTnewLM_330040900:pseudogene;coverage=0.961;sequence_ID=0.854;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.33.3060_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1421352 1422568 . + . ID=LTnewLM_330040900.1;Parent=LTnewLM_330040900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1421352 1422568 . + . ID=LTnewLM_330040900.1:pseudogenic_exon:1;Parent=LTnewLM_330040900.1;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1421352 1422568 . + . ID=LTnewLM_330040900.1:pep;Derives_from=LTnewLM_330040900.1;orthologous_to=LmjF.33.3060_mRNA;ortholog_cluster=OG0007639;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1423095 1423523 0.95 + . ID=LTnewLM_330041000 LTnewLM_33 AUGUSTUS mRNA 1423095 1423523 0.95 + . ID=LTnewLM_330041000.1;Parent=LTnewLM_330041000 LTnewLM_33 AUGUSTUS CDS 1423095 1423159 0.95 + 0 ID=LTnewLM_330041000.1:CDS:1;Parent=LTnewLM_330041000.1 LTnewLM_33 AUGUSTUS CDS 1423202 1423523 0.95 + 1 ID=LTnewLM_330041000.1:CDS:2;Parent=LTnewLM_330041000.1 ### LTnewLM_33 . polypeptide 1423095 1423523 . + . ID=LTnewLM_330041000.1:pep;Derives_from=LTnewLM_330041000.1;orthologous_to=LTnewLM_210020800.1,LmjF.21.1230_mRNA,LmjF.21.1240_mRNA;ortholog_cluster=OG0000155;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . pseudogene 1424467 1445734 2.85e+04 + . ID=LTnewLM_330041100:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;has_stop=true;Target=LmjF.33.3070:mRNA 1 7552;original_prot_length=7552 LTnewLM_33 . pseudogenic_transcript 1424467 1445734 . + . ID=LTnewLM_330041100.1;Parent=LTnewLM_330041100:pseudogene LTnewLM_33 . pseudogenic_exon 1424467 1429956 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:1;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1429958 1430872 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:2;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1430875 1432146 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:3;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1432148 1433500 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:4;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433502 1433543 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:5;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433546 1433611 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:6;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433614 1433685 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:7;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433688 1433720 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:8;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433723 1433746 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:9;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433748 1433798 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:10;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433801 1433821 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:11;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1433823 1434260 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:12;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1434262 1434906 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:13;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1434909 1435928 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:14;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1435931 1436035 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:15;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1436038 1436376 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:16;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1436379 1436693 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:17;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1436695 1436958 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:18;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1436961 1437521 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:19;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1437524 1437532 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:20;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1437535 1437777 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:21;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1437780 1437803 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:22;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1437806 1438387 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:23;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1438389 1438454 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:24;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1438457 1438516 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:25;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1438519 1438851 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:26;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1438853 1439002 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:27;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1439004 1439219 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:28;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1439221 1439754 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:29;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1439757 1439813 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:30;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1439816 1440481 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:31;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1440484 1442079 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:32;Parent=LTnewLM_330041100.1 LTnewLM_33 . pseudogenic_exon 1442081 1445734 . + . ID=LTnewLM_330041100.1:pseudogenic_exon:33;Parent=LTnewLM_330041100.1 ### LTnewLM_33 . polypeptide 1424467 1445734 . + . ID=LTnewLM_330041100.1:pep;Derives_from=LTnewLM_330041100.1;orthologous_to=LmjF.33.3070_mRNA;ortholog_cluster=OG0007640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1447675 1454226 1 + . ID=LTnewLM_330041200 LTnewLM_33 AUGUSTUS mRNA 1447675 1454226 1 + . ID=LTnewLM_330041200.1;Parent=LTnewLM_330041200 LTnewLM_33 AUGUSTUS CDS 1447675 1454226 1 + 0 ID=LTnewLM_330041200.1:CDS:1;Parent=LTnewLM_330041200.1 ### LTnewLM_33 . polypeptide 1447675 1454226 . + . ID=LTnewLM_330041200.1:pep;Derives_from=LTnewLM_330041200.1;orthologous_to=LmjF.33.3080_mRNA;ortholog_cluster=OG0005294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1456919 1461292 1 + . ID=LTnewLM_330041300 LTnewLM_33 AUGUSTUS mRNA 1456919 1461292 1 + . ID=LTnewLM_330041300.1;Parent=LTnewLM_330041300 LTnewLM_33 AUGUSTUS CDS 1456919 1461292 1 + 0 ID=LTnewLM_330041300.1:CDS:1;Parent=LTnewLM_330041300.1 ### LTnewLM_33 . polypeptide 1456919 1461292 . + . ID=LTnewLM_330041300.1:pep;Derives_from=LTnewLM_330041300.1;orthologous_to=LmjF.33.3090_mRNA;ortholog_cluster=OG0005295;product=term%3DHolliday-junction resolvase-like of SPT6/SH2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14639|Pfam:PF14633 LTnewLM_33 Pfam protein_match 1459001 1459387 . + . Parent=LTnewLM_330041300.1:pep;Name=PF14639;signature_desc=Holliday-junction resolvase-like of SPT6 LTnewLM_33 Pfam protein_match 1460627 1461082 . + . Parent=LTnewLM_330041300.1:pep;Name=PF14633;signature_desc=SH2 domain ### LTnewLM_33 AUGUSTUS gene 1462410 1463807 1 + . ID=LTnewLM_330041400 LTnewLM_33 AUGUSTUS mRNA 1462410 1463807 1 + . ID=LTnewLM_330041400.1;Parent=LTnewLM_330041400 LTnewLM_33 AUGUSTUS CDS 1462410 1463807 1 + 0 ID=LTnewLM_330041400.1:CDS:1;Parent=LTnewLM_330041400.1 ### LTnewLM_33 . polypeptide 1462410 1463807 . + . ID=LTnewLM_330041400.1:pep;Derives_from=LTnewLM_330041400.1;orthologous_to=LmjF.33.3100_mRNA;ortholog_cluster=OG0005296;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1468444 1469361 1 + . ID=LTnewLM_330041500 LTnewLM_33 AUGUSTUS mRNA 1468444 1469361 1 + . ID=LTnewLM_330041500.1;Parent=LTnewLM_330041500 LTnewLM_33 AUGUSTUS CDS 1468444 1469361 1 + 0 ID=LTnewLM_330041500.1:CDS:1;Parent=LTnewLM_330041500.1 ### LTnewLM_33 . polypeptide 1468444 1469361 . + . ID=LTnewLM_330041500.1:pep;Derives_from=LTnewLM_330041500.1;orthologous_to=LmjF.33.3130_mRNA;ortholog_cluster=OG0005297;product=term%3DTrypsin-like peptidase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13365 LTnewLM_33 Pfam protein_match 1468651 1469241 . + . Parent=LTnewLM_330041500.1:pep;Name=PF13365;signature_desc=Trypsin-like peptidase domain ### LTnewLM_33 AUGUSTUS gene 1469899 1472916 1 + . ID=LTnewLM_330041600 LTnewLM_33 AUGUSTUS mRNA 1469899 1472916 1 + . ID=LTnewLM_330041600.1;Parent=LTnewLM_330041600 LTnewLM_33 AUGUSTUS CDS 1469899 1472916 1 + 0 ID=LTnewLM_330041600.1:CDS:1;Parent=LTnewLM_330041600.1 ### LTnewLM_33 . polypeptide 1469899 1472916 . + . ID=LTnewLM_330041600.1:pep;Derives_from=LTnewLM_330041600.1;orthologous_to=LmjF.33.3140_mRNA;ortholog_cluster=OG0005298;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1473476 1473931 1 + . ID=LTnewLM_330041700 LTnewLM_33 AUGUSTUS mRNA 1473476 1473931 1 + . ID=LTnewLM_330041700.1;Parent=LTnewLM_330041700 LTnewLM_33 AUGUSTUS CDS 1473476 1473931 1 + 0 ID=LTnewLM_330041700.1:CDS:1;Parent=LTnewLM_330041700.1 ### LTnewLM_33 . polypeptide 1473476 1473931 . + . ID=LTnewLM_330041700.1:pep;Derives_from=LTnewLM_330041700.1;orthologous_to=LTnewLM_190008900.1,LmjF.19.0390_mRNA,LmjF.33.3150_mRNA;ortholog_cluster=OG0000140;product=term%3DRibosomal S13/S15 N-terminal domain/Ribosomal protein S15%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08069|Pfam:PF00312;Ontology_term=GO:0005622,GO:0006412,GO:0003735,GO:0005840 LTnewLM_33 Pfam protein_match 1473476 1473652 . + . Parent=LTnewLM_330041700.1:pep;Name=PF08069;signature_desc=Ribosomal S13/S15 N-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_33 Pfam protein_match 1473698 1473910 . + . Parent=LTnewLM_330041700.1:pep;Name=PF00312;signature_desc=Ribosomal protein S15;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_33 AUGUSTUS gene 1474583 1476052 1 + . ID=LTnewLM_330041800 LTnewLM_33 AUGUSTUS mRNA 1474583 1476052 1 + . ID=LTnewLM_330041800.1;Parent=LTnewLM_330041800 LTnewLM_33 AUGUSTUS CDS 1474583 1476052 1 + 0 ID=LTnewLM_330041800.1:CDS:1;Parent=LTnewLM_330041800.1 ### LTnewLM_33 . polypeptide 1474583 1476052 . + . ID=LTnewLM_330041800.1:pep;Derives_from=LTnewLM_330041800.1;orthologous_to=LmjF.33.3160_mRNA;ortholog_cluster=OG0005299;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1476698 1478287 1 + . ID=LTnewLM_330041900 LTnewLM_33 AUGUSTUS mRNA 1476698 1478287 1 + . ID=LTnewLM_330041900.1;Parent=LTnewLM_330041900 LTnewLM_33 AUGUSTUS CDS 1476698 1478287 1 + 0 ID=LTnewLM_330041900.1:CDS:1;Parent=LTnewLM_330041900.1 ### LTnewLM_33 . polypeptide 1476698 1478287 . + . ID=LTnewLM_330041900.1:pep;Derives_from=LTnewLM_330041900.1;orthologous_to=LmjF.33.3170_mRNA;ortholog_cluster=OG0005300;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1479247 1481085 1 + . ID=LTnewLM_330042000 LTnewLM_33 AUGUSTUS mRNA 1479247 1481085 1 + . ID=LTnewLM_330042000.1;Parent=LTnewLM_330042000 LTnewLM_33 AUGUSTUS CDS 1479247 1481085 1 + 0 ID=LTnewLM_330042000.1:CDS:1;Parent=LTnewLM_330042000.1 ### LTnewLM_33 . polypeptide 1479247 1481085 . + . ID=LTnewLM_330042000.1:pep;Derives_from=LTnewLM_330042000.1;orthologous_to=LmjF.33.3180_mRNA;ortholog_cluster=OG0005301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1481920 1482231 1 + . ID=LTnewLM_330042100 LTnewLM_33 AUGUSTUS mRNA 1481920 1482231 1 + . ID=LTnewLM_330042100.1;Parent=LTnewLM_330042100 LTnewLM_33 AUGUSTUS CDS 1481920 1482231 1 + 0 ID=LTnewLM_330042100.1:CDS:1;Parent=LTnewLM_330042100.1 ### LTnewLM_33 . polypeptide 1481920 1482231 . + . ID=LTnewLM_330042100.1:pep;Derives_from=LTnewLM_330042100.1;orthologous_to=LmjF.33.3190_mRNA;ortholog_cluster=OG0005302;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_33 Pfam protein_match 1482031 1482216 . + . Parent=LTnewLM_330042100.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_33 AUGUSTUS gene 1483133 1484137 1 + . ID=LTnewLM_330042200 LTnewLM_33 AUGUSTUS mRNA 1483133 1484137 1 + . ID=LTnewLM_330042200.1;Parent=LTnewLM_330042200 LTnewLM_33 AUGUSTUS CDS 1483133 1484137 1 + 0 ID=LTnewLM_330042200.1:CDS:1;Parent=LTnewLM_330042200.1 ### LTnewLM_33 . polypeptide 1483133 1484137 . + . ID=LTnewLM_330042200.1:pep;Derives_from=LTnewLM_330042200.1;orthologous_to=LmjF.33.3200_mRNA;ortholog_cluster=OG0005303;product=term%3DZIP Zinc transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02535;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020 LTnewLM_33 Pfam protein_match 1483208 1483510 . + . Parent=LTnewLM_330042200.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 LTnewLM_33 Pfam protein_match 1483553 1484119 . + . Parent=LTnewLM_330042200.1:pep;Name=PF02535;signature_desc=ZIP Zinc transporter;Ontology_term=GO:0046873,GO:0030001,GO:0055085,GO:0016020 ### LTnewLM_33 AUGUSTUS gene 1486859 1489513 1 + . ID=LTnewLM_330042300 LTnewLM_33 AUGUSTUS mRNA 1486859 1489513 1 + . ID=LTnewLM_330042300.1;Parent=LTnewLM_330042300 LTnewLM_33 AUGUSTUS CDS 1486859 1489513 1 + 0 ID=LTnewLM_330042300.1:CDS:1;Parent=LTnewLM_330042300.1 ### LTnewLM_33 . polypeptide 1486859 1489513 . + . ID=LTnewLM_330042300.1:pep;Derives_from=LTnewLM_330042300.1;orthologous_to=LmjF.33.3210_mRNA;ortholog_cluster=OG0005304;product=term%3DWD domain%2C G-beta repeat/Coatomer WD associated region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF04053;Ontology_term=GO:0005198,GO:0030117,GO:0005515,GO:0006886,GO:0016192 LTnewLM_33 Pfam protein_match 1487135 1487239 . + . Parent=LTnewLM_330042300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 1487258 1487368 . + . Parent=LTnewLM_330042300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 1487396 1487503 . + . Parent=LTnewLM_330042300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_33 Pfam protein_match 1487822 1489147 . + . Parent=LTnewLM_330042300.1:pep;Name=PF04053;signature_desc=Coatomer WD associated region;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030117 ### LTnewLM_33 . pseudogene 1490480 1494770 . + . ID=LTnewLM_330042400:pseudogene;coverage=0.998;sequence_ID=0.930;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.33.3220_0;has_internal_stop=true LTnewLM_33 . pseudogenic_transcript 1490480 1494770 . + . ID=LTnewLM_330042400.1;Parent=LTnewLM_330042400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1492677 1494770 . + . ID=LTnewLM_330042400.1:pseudogenic_exon:1;Parent=LTnewLM_330042400.1;extra_copy_number=0 LTnewLM_33 . pseudogenic_transcript 1493133 1494770 . + . ID=LTnewLM_330042400.2;Parent=LTnewLM_330042400:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_33 . pseudogenic_exon 1493166 1494770 . + . ID=LTnewLM_330042400.2:pseudogenic_exon:1;Parent=LTnewLM_330042400.2;extra_copy_number=0 ### LTnewLM_33 . polypeptide 1492677 1494770 . + . ID=LTnewLM_330042400.1:pep;Derives_from=LTnewLM_330042400.1;orthologous_to=LTnewLM_330042400.2,LmjF.33.3220.1_mRNA,LmjF.33.3220.2_mRNA;ortholog_cluster=OG0000294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 . polypeptide 1493166 1494770 . + . ID=LTnewLM_330042400.2:pep;Derives_from=LTnewLM_330042400.2;orthologous_to=LTnewLM_330042400.1,LmjF.33.3220.1_mRNA,LmjF.33.3220.2_mRNA;ortholog_cluster=OG0000294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1495419 1495739 1 + . ID=LTnewLM_330042500 LTnewLM_33 AUGUSTUS mRNA 1495419 1495739 1 + . ID=LTnewLM_330042500.1;Parent=LTnewLM_330042500 LTnewLM_33 AUGUSTUS CDS 1495419 1495739 1 + 0 ID=LTnewLM_330042500.1:CDS:1;Parent=LTnewLM_330042500.1 ### LTnewLM_33 . polypeptide 1495419 1495739 . + . ID=LTnewLM_330042500.1:pep;Derives_from=LTnewLM_330042500.1;orthologous_to=LTnewLM_130021800.1,LmjF.13.1670_mRNA,LmjF.33.3230_mRNA;ortholog_cluster=OG0000118;product=term%3DRibosomal protein L44%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00935;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_33 Pfam protein_match 1495476 1495694 . + . Parent=LTnewLM_330042500.1:pep;Name=PF00935;signature_desc=Ribosomal protein L44;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_33 AUGUSTUS gene 1496310 1496720 1 + . ID=LTnewLM_330042600 LTnewLM_33 AUGUSTUS mRNA 1496310 1496720 1 + . ID=LTnewLM_330042600.1;Parent=LTnewLM_330042600 LTnewLM_33 AUGUSTUS CDS 1496310 1496720 1 + 0 ID=LTnewLM_330042600.1:CDS:1;Parent=LTnewLM_330042600.1 ### LTnewLM_33 . polypeptide 1496310 1496720 . + . ID=LTnewLM_330042600.1:pep;Derives_from=LTnewLM_330042600.1;orthologous_to=LmjF.33.3240_mRNA;ortholog_cluster=OG0005305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1498283 1499656 1 + . ID=LTnewLM_330042700 LTnewLM_33 AUGUSTUS mRNA 1498283 1499656 1 + . ID=LTnewLM_330042700.1;Parent=LTnewLM_330042700 LTnewLM_33 AUGUSTUS CDS 1498283 1499656 1 + 0 ID=LTnewLM_330042700.1:CDS:1;Parent=LTnewLM_330042700.1 ### LTnewLM_33 . polypeptide 1498283 1499656 . + . ID=LTnewLM_330042700.1:pep;Derives_from=LTnewLM_330042700.1;orthologous_to=LmjF.33.3250_mRNA;ortholog_cluster=OG0005306;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_33 AUGUSTUS gene 1500796 1503645 1 + . ID=LTnewLM_330042800 LTnewLM_33 AUGUSTUS mRNA 1500796 1503645 1 + . ID=LTnewLM_330042800.1;Parent=LTnewLM_330042800 LTnewLM_33 AUGUSTUS CDS 1500796 1503645 1 + 0 ID=LTnewLM_330042800.1:CDS:1;Parent=LTnewLM_330042800.1 ### LTnewLM_33 . polypeptide 1500796 1503645 . + . ID=LTnewLM_330042800.1:pep;Derives_from=LTnewLM_330042800.1;orthologous_to=LmjF.33.3260_mRNA;ortholog_cluster=OG0005307;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_33 Pfam protein_match 1502950 1503414 . + . Parent=LTnewLM_330042800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_33 AUGUSTUS gene 1504136 1505320 1 + . ID=LTnewLM_330042900 LTnewLM_33 AUGUSTUS mRNA 1504136 1505320 1 + . ID=LTnewLM_330042900.1;Parent=LTnewLM_330042900 LTnewLM_33 AUGUSTUS CDS 1504136 1505320 1 + 0 ID=LTnewLM_330042900.1:CDS:1;Parent=LTnewLM_330042900.1 ### LTnewLM_33 . polypeptide 1504136 1505320 . + . ID=LTnewLM_330042900.1:pep;Derives_from=LTnewLM_330042900.1;orthologous_to=LmjF.33.3270_mRNA;ortholog_cluster=OG0005308;product=term%3DFatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487;Ontology_term=GO:0006629 LTnewLM_33 Pfam protein_match 1504427 1505203 . + . Parent=LTnewLM_330042900.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_33 AUGUSTUS gene 1507819 1508028 1 + . ID=LTnewLM_330043000 LTnewLM_33 AUGUSTUS mRNA 1507819 1508028 1 + . ID=LTnewLM_330043000.1;Parent=LTnewLM_330043000 LTnewLM_33 AUGUSTUS CDS 1507819 1508028 1 + 0 ID=LTnewLM_330043000.1:CDS:1;Parent=LTnewLM_330043000.1 ### LTnewLM_33 . polypeptide 1507819 1508028 . + . ID=LTnewLM_330043000.1:pep;Derives_from=LTnewLM_330043000.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 1 713 0.93 + . ID=LTnewLM_340005000;fiveEndPartial=true;Start_range=.,. LTnewLM_34 AUGUSTUS mRNA 1 713 0.93 + . ID=LTnewLM_340005000.1;Parent=LTnewLM_340005000 LTnewLM_34 AUGUSTUS CDS 520 713 0.93 + 2 ID=LTnewLM_340005000.1:CDS:1;Parent=LTnewLM_340005000.1 ### LTnewLM_34 . contig 1 1723276 . + . Name=LTnewLM_CTG000035 LTnewLM_34 . polypeptide 520 713 . + . ID=LTnewLM_340005000.1:pep;Derives_from=LTnewLM_340005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 10032 10952 1 - . ID=LTnewLM_340005100 LTnewLM_34 AUGUSTUS mRNA 10032 10952 1 - . ID=LTnewLM_340005100.1;Parent=LTnewLM_340005100 LTnewLM_34 AUGUSTUS CDS 10032 10952 1 - 0 ID=LTnewLM_340005100.1:CDS:1;Parent=LTnewLM_340005100.1 ### LTnewLM_34 . polypeptide 10032 10952 . - . ID=LTnewLM_340005100.1:pep;Derives_from=LTnewLM_340005100.1;orthologous_to=LmjF.34.0010_mRNA;ortholog_cluster=OG0005309;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_34 Pfam protein_match 10236 10808 . - . Parent=LTnewLM_340005100.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_34 Pfam protein_match 10248 10823 . - . Parent=LTnewLM_340005100.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 ### LTnewLM_34 Liftoff gene 12578 13927 . + . ID=LTnewLM_340005200;coverage=0.999;sequence_ID=0.896;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0020_0 LTnewLM_34 Liftoff mRNA 12578 13927 . + . ID=LTnewLM_340005200.1;Parent=LTnewLM_340005200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 12578 13927 . + 0 ID=LTnewLM_340005200.1:CDS:1;Parent=LTnewLM_340005200.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 12578 13927 . + . ID=LTnewLM_340005200.1:pep;Derives_from=LTnewLM_340005200.1;orthologous_to=LmjF.34.0020_mRNA;ortholog_cluster=OG0005310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 14653 15675 1 + . ID=LTnewLM_340005300 LTnewLM_34 AUGUSTUS mRNA 14653 15675 1 + . ID=LTnewLM_340005300.1;Parent=LTnewLM_340005300 LTnewLM_34 AUGUSTUS CDS 14653 15675 1 + 0 ID=LTnewLM_340005300.1:CDS:1;Parent=LTnewLM_340005300.1 ### LTnewLM_34 . polypeptide 14653 15675 . + . ID=LTnewLM_340005300.1:pep;Derives_from=LTnewLM_340005300.1;orthologous_to=LmjF.34.0030_mRNA;ortholog_cluster=OG0005311;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_34 Pfam protein_match 14767 15573 . + . Parent=LTnewLM_340005300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 14779 15591 . + . Parent=LTnewLM_340005300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_34 . pseudogene 16624 18781 . + . ID=LTnewLM_340005400:pseudogene;coverage=0.999;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0040_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 16624 18781 . + . ID=LTnewLM_340005400.1;Parent=LTnewLM_340005400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 16624 18781 . + . ID=LTnewLM_340005400.1:pseudogenic_exon:1;Parent=LTnewLM_340005400.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 16624 18781 . + . ID=LTnewLM_340005400.1:pep;Derives_from=LTnewLM_340005400.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 19293 21047 1 + . ID=LTnewLM_340005500 LTnewLM_34 AUGUSTUS mRNA 19293 21047 1 + . ID=LTnewLM_340005500.1;Parent=LTnewLM_340005500 LTnewLM_34 AUGUSTUS CDS 19293 21047 1 + 0 ID=LTnewLM_340005500.1:CDS:1;Parent=LTnewLM_340005500.1 ### LTnewLM_34 . polypeptide 19293 21047 . + . ID=LTnewLM_340005500.1:pep;Derives_from=LTnewLM_340005500.1;orthologous_to=LmjF.34.0050_mRNA;ortholog_cluster=OG0005312;product=term%3DCleft lip and palate transmembrane protein 1 (CLPTM1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05602;Ontology_term=GO:0016021 LTnewLM_34 Pfam protein_match 19356 20669 . + . Parent=LTnewLM_340005500.1:pep;Name=PF05602;signature_desc=Cleft lip and palate transmembrane protein 1 (CLPTM1);Ontology_term=GO:0016021 ### LTnewLM_34 AUGUSTUS gene 23296 26496 1 + . ID=LTnewLM_340005600 LTnewLM_34 AUGUSTUS mRNA 23296 26496 1 + . ID=LTnewLM_340005600.1;Parent=LTnewLM_340005600 LTnewLM_34 AUGUSTUS CDS 23296 26496 1 + 0 ID=LTnewLM_340005600.1:CDS:1;Parent=LTnewLM_340005600.1 ### LTnewLM_34 . polypeptide 23296 26496 . + . ID=LTnewLM_340005600.1:pep;Derives_from=LTnewLM_340005600.1;orthologous_to=LmjF.34.0060_mRNA;ortholog_cluster=OG0005313;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 27669 28640 1 + . ID=LTnewLM_340005700 LTnewLM_34 AUGUSTUS mRNA 27669 28640 1 + . ID=LTnewLM_340005700.1;Parent=LTnewLM_340005700 LTnewLM_34 AUGUSTUS CDS 27669 28640 1 + 0 ID=LTnewLM_340005700.1:CDS:1;Parent=LTnewLM_340005700.1 ### LTnewLM_34 . polypeptide 27669 28640 . + . ID=LTnewLM_340005700.1:pep;Derives_from=LTnewLM_340005700.1;orthologous_to=LmjF.34.0070_mRNA;ortholog_cluster=OG0005314;product=term%3DPeroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00141;Ontology_term=GO:0006979,GO:0004601,GO:0055114,GO:0020037 LTnewLM_34 Pfam protein_match 27861 28541 . + . Parent=LTnewLM_340005700.1:pep;Name=PF00141;signature_desc=Peroxidase;Ontology_term=GO:0004601,GO:0020037,GO:0006979,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 31146 32834 1 + . ID=LTnewLM_340005800 LTnewLM_34 AUGUSTUS mRNA 31146 32834 1 + . ID=LTnewLM_340005800.1;Parent=LTnewLM_340005800 LTnewLM_34 AUGUSTUS CDS 31146 32834 1 + 0 ID=LTnewLM_340005800.1:CDS:1;Parent=LTnewLM_340005800.1 ### LTnewLM_34 . polypeptide 31146 32834 . + . ID=LTnewLM_340005800.1:pep;Derives_from=LTnewLM_340005800.1;orthologous_to=LmjF.34.0080_mRNA;ortholog_cluster=OG0005315;product=term%3DGlucose-6-phosphate dehydrogenase%2C NAD binding domain/Glucose-6-phosphate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00479|Pfam:PF02781;Ontology_term=GO:0006006,GO:0004345,GO:0055114,GO:0050661 LTnewLM_34 Pfam protein_match 31368 31919 . + . Parent=LTnewLM_340005800.1:pep;Name=PF00479;signature_desc=Glucose-6-phosphate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0004345,GO:0050661,GO:0006006,GO:0055114 LTnewLM_34 Pfam protein_match 31929 32789 . + . Parent=LTnewLM_340005800.1:pep;Name=PF02781;signature_desc=Glucose-6-phosphate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0004345,GO:0050661,GO:0006006,GO:0055114 ### LTnewLM_34 . pseudogene 34830 35388 . + . ID=LTnewLM_340005900:pseudogene;coverage=0.996;sequence_ID=0.894;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0085_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 34830 35388 . + . ID=LTnewLM_340005900.1;Parent=LTnewLM_340005900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 34830 35388 . + . ID=LTnewLM_340005900.1:pseudogenic_exon:1;Parent=LTnewLM_340005900.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 34830 35388 . + . ID=LTnewLM_340005900.1:pep;Derives_from=LTnewLM_340005900.1;orthologous_to=LmjF.34.0085_mRNA;ortholog_cluster=OG0007641;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 37362 39152 1 + . ID=LTnewLM_340006000 LTnewLM_34 AUGUSTUS mRNA 37362 39152 1 + . ID=LTnewLM_340006000.1;Parent=LTnewLM_340006000 LTnewLM_34 AUGUSTUS CDS 37362 39152 1 + 0 ID=LTnewLM_340006000.1:CDS:1;Parent=LTnewLM_340006000.1 ### LTnewLM_34 . polypeptide 37362 39152 . + . ID=LTnewLM_340006000.1:pep;Derives_from=LTnewLM_340006000.1;orthologous_to=LmjF.34.0090_mRNA;ortholog_cluster=OG0005316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 40133 42418 1 + . ID=LTnewLM_340006100 LTnewLM_34 AUGUSTUS mRNA 40133 42418 1 + . ID=LTnewLM_340006100.1;Parent=LTnewLM_340006100 LTnewLM_34 AUGUSTUS CDS 40133 42418 1 + 0 ID=LTnewLM_340006100.1:CDS:1;Parent=LTnewLM_340006100.1 ### LTnewLM_34 . polypeptide 40133 42418 . + . ID=LTnewLM_340006100.1:pep;Derives_from=LTnewLM_340006100.1;orthologous_to=LmjF.34.0100_mRNA;ortholog_cluster=OG0005317;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 43290 43946 1 + . ID=LTnewLM_340006200 LTnewLM_34 AUGUSTUS mRNA 43290 43946 1 + . ID=LTnewLM_340006200.1;Parent=LTnewLM_340006200 LTnewLM_34 AUGUSTUS CDS 43290 43946 1 + 0 ID=LTnewLM_340006200.1:CDS:1;Parent=LTnewLM_340006200.1 ### LTnewLM_34 . polypeptide 43290 43946 . + . ID=LTnewLM_340006200.1:pep;Derives_from=LTnewLM_340006200.1;orthologous_to=LmjF.34.0110_mRNA;ortholog_cluster=OG0005318;product=term%3DAdenylate kinase/AAA domain/Adenylate kinase%2C active site lid%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00406|Pfam:PF13207|Pfam:PF05191;Ontology_term=GO:0004017 LTnewLM_34 Pfam protein_match 43302 43844 . + . Parent=LTnewLM_340006200.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_34 Pfam protein_match 43305 43682 . + . Parent=LTnewLM_340006200.1:pep;Name=PF13207;signature_desc=AAA domain LTnewLM_34 Pfam protein_match 43656 43760 . + . Parent=LTnewLM_340006200.1:pep;Name=PF05191;signature_desc=Adenylate kinase%2C active site lid;Ontology_term=GO:0004017 ### LTnewLM_34 AUGUSTUS gene 48185 48874 1 + . ID=LTnewLM_340006300 LTnewLM_34 AUGUSTUS mRNA 48185 48874 1 + . ID=LTnewLM_340006300.1;Parent=LTnewLM_340006300 LTnewLM_34 AUGUSTUS CDS 48185 48874 1 + 0 ID=LTnewLM_340006300.1:CDS:1;Parent=LTnewLM_340006300.1 ### LTnewLM_34 . polypeptide 48185 48874 . + . ID=LTnewLM_340006300.1:pep;Derives_from=LTnewLM_340006300.1;orthologous_to=LmjF.34.0120_mRNA;ortholog_cluster=OG0005319;product=term%3DAAA domain/Adenylate kinase/Adenylate kinase%2C active site lid%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13207|Pfam:PF00406|Pfam:PF05191;Ontology_term=GO:0004017 LTnewLM_34 Pfam protein_match 48203 48556 . + . Parent=LTnewLM_340006300.1:pep;Name=PF13207;signature_desc=AAA domain LTnewLM_34 Pfam protein_match 48203 48727 . + . Parent=LTnewLM_340006300.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_34 Pfam protein_match 48557 48652 . + . Parent=LTnewLM_340006300.1:pep;Name=PF05191;signature_desc=Adenylate kinase%2C active site lid;Ontology_term=GO:0004017 ### LTnewLM_34 AUGUSTUS gene 49976 51004 1 + . ID=LTnewLM_340006400 LTnewLM_34 AUGUSTUS mRNA 49976 51004 1 + . ID=LTnewLM_340006400.1;Parent=LTnewLM_340006400 LTnewLM_34 AUGUSTUS CDS 49976 51004 1 + 0 ID=LTnewLM_340006400.1:CDS:1;Parent=LTnewLM_340006400.1 ### LTnewLM_34 . polypeptide 49976 51004 . + . ID=LTnewLM_340006400.1:pep;Derives_from=LTnewLM_340006400.1;orthologous_to=LmjF.34.0130_mRNA;ortholog_cluster=OG0005320;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_34 Pfam protein_match 50021 50464 . + . Parent=LTnewLM_340006400.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_34 Pfam protein_match 50471 50983 . + . Parent=LTnewLM_340006400.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 51721 52674 1 + . ID=LTnewLM_340006500 LTnewLM_34 AUGUSTUS mRNA 51721 52674 1 + . ID=LTnewLM_340006500.1;Parent=LTnewLM_340006500 LTnewLM_34 AUGUSTUS CDS 51721 52674 1 + 0 ID=LTnewLM_340006500.1:CDS:1;Parent=LTnewLM_340006500.1 ### LTnewLM_34 . polypeptide 51721 52674 . + . ID=LTnewLM_340006500.1:pep;Derives_from=LTnewLM_340006500.1;orthologous_to=LmjF.34.0140_mRNA;ortholog_cluster=OG0005321;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_34 Pfam protein_match 51748 52170 . + . Parent=LTnewLM_340006500.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_34 Pfam protein_match 52177 52659 . + . Parent=LTnewLM_340006500.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 55905 56900 1 + . ID=LTnewLM_340006600 LTnewLM_34 AUGUSTUS mRNA 55905 56900 1 + . ID=LTnewLM_340006600.1;Parent=LTnewLM_340006600 LTnewLM_34 AUGUSTUS CDS 55905 56900 1 + 0 ID=LTnewLM_340006600.1:CDS:1;Parent=LTnewLM_340006600.1 ### LTnewLM_34 . polypeptide 55905 56900 . + . ID=LTnewLM_340006600.1:pep;Derives_from=LTnewLM_340006600.1;orthologous_to=LmjF.34.0150_mRNA;ortholog_cluster=OG0005322;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_34 Pfam protein_match 55932 56354 . + . Parent=LTnewLM_340006600.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_34 Pfam protein_match 56367 56849 . + . Parent=LTnewLM_340006600.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 59074 60051 1 + . ID=LTnewLM_340006700 LTnewLM_34 AUGUSTUS mRNA 59074 60051 1 + . ID=LTnewLM_340006700.1;Parent=LTnewLM_340006700 LTnewLM_34 AUGUSTUS CDS 59074 60051 1 + 0 ID=LTnewLM_340006700.1:CDS:1;Parent=LTnewLM_340006700.1 ### LTnewLM_34 . polypeptide 59074 60051 . + . ID=LTnewLM_340006700.1:pep;Derives_from=LTnewLM_340006700.1;orthologous_to=LmjF.34.0160_mRNA;ortholog_cluster=OG0005323;product=term%3Dlactate/malate dehydrogenase%2C NAD binding domain/lactate/malate dehydrogenase%2C alpha/beta C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00056|Pfam:PF02866;Ontology_term=GO:0055114,GO:0016491,GO:0016616 LTnewLM_34 Pfam protein_match 59101 59523 . + . Parent=LTnewLM_340006700.1:pep;Name=PF00056;signature_desc=lactate/malate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_34 Pfam protein_match 59530 60015 . + . Parent=LTnewLM_340006700.1:pep;Name=PF02866;signature_desc=lactate/malate dehydrogenase%2C alpha/beta C-terminal domain;Ontology_term=GO:0016616,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 62069 63028 1 + . ID=LTnewLM_340006800 LTnewLM_34 AUGUSTUS mRNA 62069 63028 1 + . ID=LTnewLM_340006800.1;Parent=LTnewLM_340006800 LTnewLM_34 AUGUSTUS CDS 62069 63028 1 + 0 ID=LTnewLM_340006800.1:CDS:1;Parent=LTnewLM_340006800.1 ### LTnewLM_34 . polypeptide 62069 63028 . + . ID=LTnewLM_340006800.1:pep;Derives_from=LTnewLM_340006800.1;orthologous_to=LmjF.34.0170_mRNA;ortholog_cluster=OG0005324;product=term%3DNucleolar protein 12 (25kDa)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09805 LTnewLM_34 Pfam protein_match 62225 62572 . + . Parent=LTnewLM_340006800.1:pep;Name=PF09805;signature_desc=Nucleolar protein 12 (25kDa) ### LTnewLM_34 AUGUSTUS gene 63958 65826 1 + . ID=LTnewLM_340006900 LTnewLM_34 AUGUSTUS mRNA 63958 65826 1 + . ID=LTnewLM_340006900.1;Parent=LTnewLM_340006900 LTnewLM_34 AUGUSTUS CDS 63958 65826 1 + 0 ID=LTnewLM_340006900.1:CDS:1;Parent=LTnewLM_340006900.1 ### LTnewLM_34 . polypeptide 63958 65826 . + . ID=LTnewLM_340006900.1:pep;Derives_from=LTnewLM_340006900.1;orthologous_to=LmjF.34.0175_mRNA;ortholog_cluster=OG0005325;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 69659 72133 . + . ID=LTnewLM_340007000;coverage=0.993;sequence_ID=0.933;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0180_0 LTnewLM_34 Liftoff mRNA 69659 72133 . + . ID=LTnewLM_340007000.1;Parent=LTnewLM_340007000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 69659 72133 . + 0 ID=LTnewLM_340007000.1:CDS:1;Parent=LTnewLM_340007000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 69659 72133 . + . ID=LTnewLM_340007000.1:pep;Derives_from=LTnewLM_340007000.1;orthologous_to=LmjF.34.0180_mRNA;ortholog_cluster=OG0005326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 72964 74439 1 + . ID=LTnewLM_340007100 LTnewLM_34 AUGUSTUS mRNA 72964 74439 1 + . ID=LTnewLM_340007100.1;Parent=LTnewLM_340007100 LTnewLM_34 AUGUSTUS CDS 72964 74439 1 + 0 ID=LTnewLM_340007100.1:CDS:1;Parent=LTnewLM_340007100.1 ### LTnewLM_34 . polypeptide 72964 74439 . + . ID=LTnewLM_340007100.1:pep;Derives_from=LTnewLM_340007100.1;orthologous_to=LmjF.34.0190_mRNA;ortholog_cluster=OG0005327;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_34 Pfam protein_match 73006 73326 . + . Parent=LTnewLM_340007100.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 73387 73674 . + . Parent=LTnewLM_340007100.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 73732 74046 . + . Parent=LTnewLM_340007100.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 74095 74403 . + . Parent=LTnewLM_340007100.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_34 AUGUSTUS gene 77794 79347 1 + . ID=LTnewLM_340007200 LTnewLM_34 AUGUSTUS mRNA 77794 79347 1 + . ID=LTnewLM_340007200.1;Parent=LTnewLM_340007200 LTnewLM_34 AUGUSTUS CDS 77794 79347 1 + 0 ID=LTnewLM_340007200.1:CDS:1;Parent=LTnewLM_340007200.1 ### LTnewLM_34 . polypeptide 77794 79347 . + . ID=LTnewLM_340007200.1:pep;Derives_from=LTnewLM_340007200.1;orthologous_to=LmjF.34.0200_mRNA;ortholog_cluster=OG0005328;product=term%3DDomain of unknown function (DUF1935)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149 LTnewLM_34 Pfam protein_match 77833 78150 . + . Parent=LTnewLM_340007200.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 78193 78495 . + . Parent=LTnewLM_340007200.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 78553 78870 . + . Parent=LTnewLM_340007200.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) LTnewLM_34 Pfam protein_match 79039 79326 . + . Parent=LTnewLM_340007200.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_34 AUGUSTUS gene 81817 82446 1 + . ID=LTnewLM_340007300 LTnewLM_34 AUGUSTUS mRNA 81817 82446 1 + . ID=LTnewLM_340007300.1;Parent=LTnewLM_340007300 LTnewLM_34 AUGUSTUS CDS 81817 82446 1 + 0 ID=LTnewLM_340007300.1:CDS:1;Parent=LTnewLM_340007300.1 ### LTnewLM_34 . polypeptide 81817 82446 . + . ID=LTnewLM_340007300.1:pep;Derives_from=LTnewLM_340007300.1;orthologous_to=LmjF.34.0210_mRNA;ortholog_cluster=OG0005329;product=term%3DCS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04969 LTnewLM_34 Pfam protein_match 81844 82068 . + . Parent=LTnewLM_340007300.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_34 AUGUSTUS gene 83201 84208 1 + . ID=LTnewLM_340007400 LTnewLM_34 AUGUSTUS mRNA 83201 84208 1 + . ID=LTnewLM_340007400.1;Parent=LTnewLM_340007400 LTnewLM_34 AUGUSTUS CDS 83201 84208 1 + 0 ID=LTnewLM_340007400.1:CDS:1;Parent=LTnewLM_340007400.1 ### LTnewLM_34 . polypeptide 83201 84208 . + . ID=LTnewLM_340007400.1:pep;Derives_from=LTnewLM_340007400.1;orthologous_to=LmjF.34.0220_mRNA;ortholog_cluster=OG0005330;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_34 Pfam protein_match 83666 84181 . + . Parent=LTnewLM_340007400.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_34 AUGUSTUS gene 85322 87481 1 + . ID=LTnewLM_340007500 LTnewLM_34 AUGUSTUS mRNA 85322 87481 1 + . ID=LTnewLM_340007500.1;Parent=LTnewLM_340007500 LTnewLM_34 AUGUSTUS CDS 85322 87481 1 + 0 ID=LTnewLM_340007500.1:CDS:1;Parent=LTnewLM_340007500.1 ### LTnewLM_34 . polypeptide 85322 87481 . + . ID=LTnewLM_340007500.1:pep;Derives_from=LTnewLM_340007500.1;orthologous_to=LmjF.34.0230_mRNA;ortholog_cluster=OG0005331;product=term%3DIntraflagellar transport 81 calponin homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18383 LTnewLM_34 Pfam protein_match 85418 85774 . + . Parent=LTnewLM_340007500.1:pep;Name=PF18383;signature_desc=Intraflagellar transport 81 calponin homology domain ### LTnewLM_34 AUGUSTUS gene 88764 92897 1 + . ID=LTnewLM_340007600 LTnewLM_34 AUGUSTUS mRNA 88764 92897 1 + . ID=LTnewLM_340007600.1;Parent=LTnewLM_340007600 LTnewLM_34 AUGUSTUS CDS 88764 92897 1 + 0 ID=LTnewLM_340007600.1:CDS:1;Parent=LTnewLM_340007600.1 ### LTnewLM_34 . polypeptide 88764 92897 . + . ID=LTnewLM_340007600.1:pep;Derives_from=LTnewLM_340007600.1;orthologous_to=LmjF.34.0240_mRNA;ortholog_cluster=OG0005332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 93869 95122 1 + . ID=LTnewLM_340007700 LTnewLM_34 AUGUSTUS mRNA 93869 95122 1 + . ID=LTnewLM_340007700.1;Parent=LTnewLM_340007700 LTnewLM_34 AUGUSTUS CDS 93869 95122 1 + 0 ID=LTnewLM_340007700.1:CDS:1;Parent=LTnewLM_340007700.1 ### LTnewLM_34 . polypeptide 93869 95122 . + . ID=LTnewLM_340007700.1:pep;Derives_from=LTnewLM_340007700.1;orthologous_to=LmjF.34.0250_mRNA;ortholog_cluster=OG0005333;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 96577 96939 1 + . ID=LTnewLM_340007800 LTnewLM_34 AUGUSTUS mRNA 96577 96939 1 + . ID=LTnewLM_340007800.1;Parent=LTnewLM_340007800 LTnewLM_34 AUGUSTUS CDS 96577 96939 1 + 0 ID=LTnewLM_340007800.1:CDS:1;Parent=LTnewLM_340007800.1 ### LTnewLM_34 . polypeptide 96577 96939 . + . ID=LTnewLM_340007800.1:pep;Derives_from=LTnewLM_340007800.1;orthologous_to=LmjF.34.0260_mRNA;ortholog_cluster=OG0005334;product=term%3DRegulatory subunit of type II PKA R-subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02197 LTnewLM_34 Pfam protein_match 96820 96924 . + . Parent=LTnewLM_340007800.1:pep;Name=PF02197;signature_desc=Regulatory subunit of type II PKA R-subunit ### LTnewLM_34 AUGUSTUS gene 97772 100153 1 + . ID=LTnewLM_340007900 LTnewLM_34 AUGUSTUS mRNA 97772 100153 1 + . ID=LTnewLM_340007900.1;Parent=LTnewLM_340007900 LTnewLM_34 AUGUSTUS CDS 97772 100153 1 + 0 ID=LTnewLM_340007900.1:CDS:1;Parent=LTnewLM_340007900.1 ### LTnewLM_34 . polypeptide 97772 100153 . + . ID=LTnewLM_340007900.1:pep;Derives_from=LTnewLM_340007900.1;orthologous_to=LmjF.34.0270_mRNA;ortholog_cluster=OG0005335;product=term%3DPyridine nucleotide-disulphide oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992;Ontology_term=GO:0055114,GO:0016491 LTnewLM_34 Pfam protein_match 97991 98509 . + . Parent=LTnewLM_340007900.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_34 Liftoff gene 102407 107248 . + . ID=LTnewLM_340008000;coverage=0.997;sequence_ID=0.951;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0280_0 LTnewLM_34 Liftoff mRNA 102407 107248 . + . ID=LTnewLM_340008000.1;Parent=LTnewLM_340008000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 102407 107248 . + 0 ID=LTnewLM_340008000.1:CDS:1;Parent=LTnewLM_340008000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 102407 107248 . + . ID=LTnewLM_340008000.1:pep;Derives_from=LTnewLM_340008000.1;orthologous_to=LmjF.34.0280_mRNA;ortholog_cluster=OG0005336;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_34 Pfam protein_match 104288 104653 . + . Parent=LTnewLM_340008000.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_34 AUGUSTUS gene 109418 111457 1 + . ID=LTnewLM_340008100 LTnewLM_34 AUGUSTUS mRNA 109418 111457 1 + . ID=LTnewLM_340008100.1;Parent=LTnewLM_340008100 LTnewLM_34 AUGUSTUS CDS 109418 111457 1 + 0 ID=LTnewLM_340008100.1:CDS:1;Parent=LTnewLM_340008100.1 ### LTnewLM_34 . polypeptide 109418 111457 . + . ID=LTnewLM_340008100.1:pep;Derives_from=LTnewLM_340008100.1;orthologous_to=LmjF.34.0290_mRNA;ortholog_cluster=OG0005337;product=term%3DSecond Longin domain of FUZ%2C MON1 and HPS1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19037 LTnewLM_34 Pfam protein_match 110357 110641 . + . Parent=LTnewLM_340008100.1:pep;Name=PF19037;signature_desc=Second Longin domain of FUZ%2C MON1 and HPS1 ### LTnewLM_34 AUGUSTUS gene 112777 115044 1 + . ID=LTnewLM_340008200 LTnewLM_34 AUGUSTUS mRNA 112777 115044 1 + . ID=LTnewLM_340008200.1;Parent=LTnewLM_340008200 LTnewLM_34 AUGUSTUS CDS 112777 115044 1 + 0 ID=LTnewLM_340008200.1:CDS:1;Parent=LTnewLM_340008200.1 ### LTnewLM_34 . polypeptide 112777 115044 . + . ID=LTnewLM_340008200.1:pep;Derives_from=LTnewLM_340008200.1;orthologous_to=LmjF.34.0300_mRNA;ortholog_cluster=OG0005338;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 113602 113685 . + . Parent=LTnewLM_340008200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 114187 114264 . + . Parent=LTnewLM_340008200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 116337 118442 1 + . ID=LTnewLM_340008300 LTnewLM_34 AUGUSTUS mRNA 116337 118442 1 + . ID=LTnewLM_340008300.1;Parent=LTnewLM_340008300 LTnewLM_34 AUGUSTUS CDS 116337 118442 1 + 0 ID=LTnewLM_340008300.1:CDS:1;Parent=LTnewLM_340008300.1 ### LTnewLM_34 . polypeptide 116337 118442 . + . ID=LTnewLM_340008300.1:pep;Derives_from=LTnewLM_340008300.1;orthologous_to=LmjF.34.0310_mRNA;ortholog_cluster=OG0005339;product=term%3DtRNA pseudouridine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01416;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_34 Pfam protein_match 117663 118208 . + . Parent=LTnewLM_340008300.1:pep;Name=PF01416;signature_desc=tRNA pseudouridine synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_34 AUGUSTUS gene 120367 121443 1 + . ID=LTnewLM_340008400 LTnewLM_34 AUGUSTUS mRNA 120367 121443 1 + . ID=LTnewLM_340008400.1;Parent=LTnewLM_340008400 LTnewLM_34 AUGUSTUS CDS 120367 121443 1 + 0 ID=LTnewLM_340008400.1:CDS:1;Parent=LTnewLM_340008400.1 ### LTnewLM_34 . polypeptide 120367 121443 . + . ID=LTnewLM_340008400.1:pep;Derives_from=LTnewLM_340008400.1;orthologous_to=LmjF.34.0320_mRNA;ortholog_cluster=OG0005340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 123270 123608 0.68 + . ID=LTnewLM_340008500 LTnewLM_34 AUGUSTUS mRNA 123270 123608 0.68 + . ID=LTnewLM_340008500.1;Parent=LTnewLM_340008500 LTnewLM_34 AUGUSTUS CDS 123270 123529 0.68 + 0 ID=LTnewLM_340008500.1:CDS:1;Parent=LTnewLM_340008500.1 LTnewLM_34 AUGUSTUS CDS 123599 123608 1 + 1 ID=LTnewLM_340008500.1:CDS:2;Parent=LTnewLM_340008500.1 ### LTnewLM_34 . polypeptide 123270 123608 . + . ID=LTnewLM_340008500.1:pep;Derives_from=LTnewLM_340008500.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 124772 126577 1 + . ID=LTnewLM_340008600 LTnewLM_34 AUGUSTUS mRNA 124772 126577 1 + . ID=LTnewLM_340008600.1;Parent=LTnewLM_340008600 LTnewLM_34 AUGUSTUS CDS 124772 126577 1 + 0 ID=LTnewLM_340008600.1:CDS:1;Parent=LTnewLM_340008600.1 ### LTnewLM_34 . polypeptide 124772 126577 . + . ID=LTnewLM_340008600.1:pep;Derives_from=LTnewLM_340008600.1;orthologous_to=LmjF.34.0330_mRNA;ortholog_cluster=OG0005341;product=term%3DDeoxyhypusine synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01916;Ontology_term=GO:0008612 LTnewLM_34 Pfam protein_match 124886 125158 . + . Parent=LTnewLM_340008600.1:pep;Name=PF01916;signature_desc=Deoxyhypusine synthase;Ontology_term=GO:0008612 LTnewLM_34 Pfam protein_match 126146 126445 . + . Parent=LTnewLM_340008600.1:pep;Name=PF01916;signature_desc=Deoxyhypusine synthase;Ontology_term=GO:0008612 ### LTnewLM_34 AUGUSTUS gene 127735 130137 1 + . ID=LTnewLM_340008700 LTnewLM_34 AUGUSTUS mRNA 127735 130137 1 + . ID=LTnewLM_340008700.1;Parent=LTnewLM_340008700 LTnewLM_34 AUGUSTUS CDS 127735 130137 1 + 0 ID=LTnewLM_340008700.1:CDS:1;Parent=LTnewLM_340008700.1 ### LTnewLM_34 . polypeptide 127735 130137 . + . ID=LTnewLM_340008700.1:pep;Derives_from=LTnewLM_340008700.1;orthologous_to=LmjF.34.0340_mRNA;ortholog_cluster=OG0005342;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004;Ontology_term=GO:0016887,GO:0005524 LTnewLM_34 Pfam protein_match 129190 129456 . + . Parent=LTnewLM_340008700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 129193 129306 . + . Parent=LTnewLM_340008700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_34 AUGUSTUS gene 131504 132640 1 + . ID=LTnewLM_340008800 LTnewLM_34 AUGUSTUS mRNA 131504 132640 1 + . ID=LTnewLM_340008800.1;Parent=LTnewLM_340008800 LTnewLM_34 AUGUSTUS CDS 131504 132640 1 + 0 ID=LTnewLM_340008800.1:CDS:1;Parent=LTnewLM_340008800.1 ### LTnewLM_34 . polypeptide 131504 132640 . + . ID=LTnewLM_340008800.1:pep;Derives_from=LTnewLM_340008800.1;orthologous_to=LmjF.34.0350_mRNA;ortholog_cluster=OG0005343;product=term%3DDomain found in IF2B/IF5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01873;Ontology_term=GO:0006413,GO:0003743 LTnewLM_34 Pfam protein_match 131537 131902 . + . Parent=LTnewLM_340008800.1:pep;Name=PF01873;signature_desc=Domain found in IF2B/IF5;Ontology_term=GO:0003743,GO:0006413 ### LTnewLM_34 AUGUSTUS gene 133769 138541 1 + . ID=LTnewLM_340008900 LTnewLM_34 AUGUSTUS mRNA 133769 138541 1 + . ID=LTnewLM_340008900.1;Parent=LTnewLM_340008900 LTnewLM_34 AUGUSTUS CDS 133769 138541 1 + 0 ID=LTnewLM_340008900.1:CDS:1;Parent=LTnewLM_340008900.1 ### LTnewLM_34 . polypeptide 133769 138541 . + . ID=LTnewLM_340008900.1:pep;Derives_from=LTnewLM_340008900.1;orthologous_to=LmjF.34.0360_mRNA;ortholog_cluster=OG0005344;product=term%3DRNA polymerase Rpb1%2C domain 1/RNA polymerase Rpb1%2C domain 2/RNA polymerase Rpb1%2C domain 3/RNA polymerase Rpb1%2C domain 4/RNA polymerase Rpb1%2C domain 5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04997|Pfam:PF00623|Pfam:PF04983|Pfam:PF05000|Pfam:PF04998;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_34 Pfam protein_match 133829 134827 . + . Parent=LTnewLM_340008900.1:pep;Name=PF04997;signature_desc=RNA polymerase Rpb1%2C domain 1;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_34 Pfam protein_match 134834 135334 . + . Parent=LTnewLM_340008900.1:pep;Name=PF00623;signature_desc=RNA polymerase Rpb1%2C domain 2;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_34 Pfam protein_match 135347 135862 . + . Parent=LTnewLM_340008900.1:pep;Name=PF04983;signature_desc=RNA polymerase Rpb1%2C domain 3;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_34 Pfam protein_match 135950 136258 . + . Parent=LTnewLM_340008900.1:pep;Name=PF05000;signature_desc=RNA polymerase Rpb1%2C domain 4;Ontology_term=GO:0003677,GO:0003899,GO:0006351 LTnewLM_34 Pfam protein_match 136280 138091 . + . Parent=LTnewLM_340008900.1:pep;Name=PF04998;signature_desc=RNA polymerase Rpb1%2C domain 5;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_34 AUGUSTUS gene 139282 142734 1 + . ID=LTnewLM_340009000 LTnewLM_34 AUGUSTUS mRNA 139282 142734 1 + . ID=LTnewLM_340009000.1;Parent=LTnewLM_340009000 LTnewLM_34 AUGUSTUS CDS 139282 142734 1 + 0 ID=LTnewLM_340009000.1:CDS:1;Parent=LTnewLM_340009000.1 ### LTnewLM_34 . polypeptide 139282 142734 . + . ID=LTnewLM_340009000.1:pep;Derives_from=LTnewLM_340009000.1;orthologous_to=LmjF.34.0370_mRNA;ortholog_cluster=OG0005345;product=term%3DConserved oligomeric complex COG6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06419;Ontology_term=GO:0017119,GO:0006891 LTnewLM_34 Pfam protein_match 139804 140958 . + . Parent=LTnewLM_340009000.1:pep;Name=PF06419;signature_desc=Conserved oligomeric complex COG6;Ontology_term=GO:0006891,GO:0017119 ### LTnewLM_34 AUGUSTUS gene 143745 145463 1 + . ID=LTnewLM_340009100 LTnewLM_34 AUGUSTUS mRNA 143745 145463 1 + . ID=LTnewLM_340009100.1;Parent=LTnewLM_340009100 LTnewLM_34 AUGUSTUS CDS 143745 145463 1 + 0 ID=LTnewLM_340009100.1:CDS:1;Parent=LTnewLM_340009100.1 ### LTnewLM_34 . polypeptide 143745 145463 . + . ID=LTnewLM_340009100.1:pep;Derives_from=LTnewLM_340009100.1;orthologous_to=LmjF.34.0380_mRNA;ortholog_cluster=OG0005346;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 146018 147736 1 + . ID=LTnewLM_340009200 LTnewLM_34 AUGUSTUS mRNA 146018 147736 1 + . ID=LTnewLM_340009200.1;Parent=LTnewLM_340009200 LTnewLM_34 AUGUSTUS CDS 146018 147736 1 + 0 ID=LTnewLM_340009200.1:CDS:1;Parent=LTnewLM_340009200.1 ### LTnewLM_34 . polypeptide 146018 147736 . + . ID=LTnewLM_340009200.1:pep;Derives_from=LTnewLM_340009200.1;orthologous_to=LmjF.34.0390_mRNA;ortholog_cluster=OG0005347;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 148357 148836 1 + . ID=LTnewLM_340009300 LTnewLM_34 AUGUSTUS mRNA 148357 148836 1 + . ID=LTnewLM_340009300.1;Parent=LTnewLM_340009300 LTnewLM_34 AUGUSTUS CDS 148357 148836 1 + 0 ID=LTnewLM_340009300.1:CDS:1;Parent=LTnewLM_340009300.1 ### LTnewLM_34 . polypeptide 148357 148836 . + . ID=LTnewLM_340009300.1:pep;Derives_from=LTnewLM_340009300.1;orthologous_to=LmjF.34.0400_mRNA;ortholog_cluster=OG0005348;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 149497 150759 1 + . ID=LTnewLM_340009400 LTnewLM_34 AUGUSTUS mRNA 149497 150759 1 + . ID=LTnewLM_340009400.1;Parent=LTnewLM_340009400 LTnewLM_34 AUGUSTUS CDS 149497 150759 1 + 0 ID=LTnewLM_340009400.1:CDS:1;Parent=LTnewLM_340009400.1 ### LTnewLM_34 . polypeptide 149497 150759 . + . ID=LTnewLM_340009400.1:pep;Derives_from=LTnewLM_340009400.1;orthologous_to=LmjF.34.0410_mRNA;ortholog_cluster=OG0005349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 152363 154057 1 + . ID=LTnewLM_340009500 LTnewLM_34 AUGUSTUS mRNA 152363 154057 1 + . ID=LTnewLM_340009500.1;Parent=LTnewLM_340009500 LTnewLM_34 AUGUSTUS CDS 152363 154057 1 + 0 ID=LTnewLM_340009500.1:CDS:1;Parent=LTnewLM_340009500.1 ### LTnewLM_34 . polypeptide 152363 154057 . + . ID=LTnewLM_340009500.1:pep;Derives_from=LTnewLM_340009500.1;orthologous_to=LmjF.34.0420_mRNA;ortholog_cluster=OG0005350;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 154856 155665 1 + . ID=LTnewLM_340009600 LTnewLM_34 AUGUSTUS mRNA 154856 155665 1 + . ID=LTnewLM_340009600.1;Parent=LTnewLM_340009600 LTnewLM_34 AUGUSTUS CDS 154856 155665 1 + 0 ID=LTnewLM_340009600.1:CDS:1;Parent=LTnewLM_340009600.1 ### LTnewLM_34 . polypeptide 154856 155665 . + . ID=LTnewLM_340009600.1:pep;Derives_from=LTnewLM_340009600.1;orthologous_to=LmjF.34.0430_mRNA;ortholog_cluster=OG0005351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 156864 157226 1 + . ID=LTnewLM_340009700 LTnewLM_34 AUGUSTUS mRNA 156864 157226 1 + . ID=LTnewLM_340009700.1;Parent=LTnewLM_340009700 LTnewLM_34 AUGUSTUS CDS 156864 157226 1 + 0 ID=LTnewLM_340009700.1:CDS:1;Parent=LTnewLM_340009700.1 ### LTnewLM_34 . polypeptide 156864 157226 . + . ID=LTnewLM_340009700.1:pep;Derives_from=LTnewLM_340009700.1;orthologous_to=LTnewLM_250018000.1,LmjF.25.1190_mRNA;ortholog_cluster=OG0000395;product=term%3DS25 ribosomal protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03297 LTnewLM_34 Pfam protein_match 156879 157169 . + . Parent=LTnewLM_340009700.1:pep;Name=PF03297;signature_desc=S25 ribosomal protein ### LTnewLM_34 AUGUSTUS gene 159615 162497 1 + . ID=LTnewLM_340009800 LTnewLM_34 AUGUSTUS mRNA 159615 162497 1 + . ID=LTnewLM_340009800.1;Parent=LTnewLM_340009800 LTnewLM_34 AUGUSTUS CDS 159615 162497 1 + 0 ID=LTnewLM_340009800.1:CDS:1;Parent=LTnewLM_340009800.1 ### LTnewLM_34 . polypeptide 159615 162497 . + . ID=LTnewLM_340009800.1:pep;Derives_from=LTnewLM_340009800.1;orthologous_to=LmjF.34.0450_mRNA;ortholog_cluster=OG0005352;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 164019 171233 1 + . ID=LTnewLM_340009900 LTnewLM_34 AUGUSTUS mRNA 164019 171233 1 + . ID=LTnewLM_340009900.1;Parent=LTnewLM_340009900 LTnewLM_34 AUGUSTUS CDS 164019 171233 1 + 0 ID=LTnewLM_340009900.1:CDS:1;Parent=LTnewLM_340009900.1 ### LTnewLM_34 . polypeptide 164019 171233 . + . ID=LTnewLM_340009900.1:pep;Derives_from=LTnewLM_340009900.1;orthologous_to=LmjF.34.0460_mRNA;ortholog_cluster=OG0005353;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 175882 178035 1 + . ID=LTnewLM_340010000 LTnewLM_34 AUGUSTUS mRNA 175882 178035 1 + . ID=LTnewLM_340010000.1;Parent=LTnewLM_340010000 LTnewLM_34 AUGUSTUS CDS 175882 178035 1 + 0 ID=LTnewLM_340010000.1:CDS:1;Parent=LTnewLM_340010000.1 ### LTnewLM_34 . polypeptide 175882 178035 . + . ID=LTnewLM_340010000.1:pep;Derives_from=LTnewLM_340010000.1;orthologous_to=LmjF.34.0470_mRNA;ortholog_cluster=OG0005354;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 175945 176061 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 176092 176184 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 176452 176571 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 176617 176697 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 176776 176886 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 176914 177015 . + . Parent=LTnewLM_340010000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 178961 179519 0.95 + . ID=LTnewLM_340010100 LTnewLM_34 AUGUSTUS mRNA 178961 179519 0.95 + . ID=LTnewLM_340010100.1;Parent=LTnewLM_340010100 LTnewLM_34 AUGUSTUS CDS 178961 179404 0.95 + 0 ID=LTnewLM_340010100.1:CDS:1;Parent=LTnewLM_340010100.1 LTnewLM_34 AUGUSTUS CDS 179508 179519 0.95 + 0 ID=LTnewLM_340010100.1:CDS:2;Parent=LTnewLM_340010100.1 ### LTnewLM_34 . polypeptide 178961 179519 . + . ID=LTnewLM_340010100.1:pep;Derives_from=LTnewLM_340010100.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 182056 190365 1 + . ID=LTnewLM_340010200 LTnewLM_34 AUGUSTUS mRNA 182056 190365 1 + . ID=LTnewLM_340010200.1;Parent=LTnewLM_340010200 LTnewLM_34 AUGUSTUS CDS 182056 190365 1 + 0 ID=LTnewLM_340010200.1:CDS:1;Parent=LTnewLM_340010200.1 ### LTnewLM_34 . polypeptide 182056 190365 . + . ID=LTnewLM_340010200.1:pep;Derives_from=LTnewLM_340010200.1;orthologous_to=LmjF.34.0480_mRNA;ortholog_cluster=OG0005355;product=term%3DIon transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00520;Ontology_term=GO:0016020,GO:0055085,GO:0006811,GO:0005216 LTnewLM_34 Pfam protein_match 183133 183951 . + . Parent=LTnewLM_340010200.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_34 Pfam protein_match 185359 186054 . + . Parent=LTnewLM_340010200.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_34 Pfam protein_match 187462 188244 . + . Parent=LTnewLM_340010200.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 LTnewLM_34 Pfam protein_match 188413 189147 . + . Parent=LTnewLM_340010200.1:pep;Name=PF00520;signature_desc=Ion transport protein;Ontology_term=GO:0005216,GO:0006811,GO:0055085,GO:0016020 ### LTnewLM_34 AUGUSTUS gene 192209 194821 1 + . ID=LTnewLM_340010300 LTnewLM_34 AUGUSTUS mRNA 192209 194821 1 + . ID=LTnewLM_340010300.1;Parent=LTnewLM_340010300 LTnewLM_34 AUGUSTUS CDS 192209 194821 1 + 0 ID=LTnewLM_340010300.1:CDS:1;Parent=LTnewLM_340010300.1 ### LTnewLM_34 . polypeptide 192209 194821 . + . ID=LTnewLM_340010300.1:pep;Derives_from=LTnewLM_340010300.1;orthologous_to=LmjF.34.0490_mRNA;ortholog_cluster=OG0005356;product=term%3DImportin-beta N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03810;Ontology_term=GO:0008536,GO:0006886 LTnewLM_34 Pfam protein_match 192272 192517 . + . Parent=LTnewLM_340010300.1:pep;Name=PF03810;signature_desc=Importin-beta N-terminal domain;Ontology_term=GO:0008536,GO:0006886 ### LTnewLM_34 AUGUSTUS gene 196253 196663 1 + . ID=LTnewLM_340010400 LTnewLM_34 AUGUSTUS mRNA 196253 196663 1 + . ID=LTnewLM_340010400.1;Parent=LTnewLM_340010400 LTnewLM_34 AUGUSTUS CDS 196253 196663 1 + 0 ID=LTnewLM_340010400.1:CDS:1;Parent=LTnewLM_340010400.1 ### LTnewLM_34 . polypeptide 196253 196663 . + . ID=LTnewLM_340010400.1:pep;Derives_from=LTnewLM_340010400.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 196705 197094 1 + . ID=LTnewLM_340010500 LTnewLM_34 AUGUSTUS mRNA 196705 197094 1 + . ID=LTnewLM_340010500.1;Parent=LTnewLM_340010500 LTnewLM_34 AUGUSTUS CDS 196705 197094 1 + 0 ID=LTnewLM_340010500.1:CDS:1;Parent=LTnewLM_340010500.1 ### LTnewLM_34 . polypeptide 196705 197094 . + . ID=LTnewLM_340010500.1:pep;Derives_from=LTnewLM_340010500.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 199507 200280 1 + . ID=LTnewLM_340010600 LTnewLM_34 AUGUSTUS mRNA 199507 200280 1 + . ID=LTnewLM_340010600.1;Parent=LTnewLM_340010600 LTnewLM_34 AUGUSTUS CDS 199507 200280 1 + 0 ID=LTnewLM_340010600.1:CDS:1;Parent=LTnewLM_340010600.1 ### LTnewLM_34 . polypeptide 199507 200280 . + . ID=LTnewLM_340010600.1:pep;Derives_from=LTnewLM_340010600.1;orthologous_to=LmjF.34.0495_mRNA;ortholog_cluster=OG0005357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 202555 202842 0.77 + . ID=LTnewLM_340010700 LTnewLM_34 AUGUSTUS mRNA 202555 202842 0.77 + . ID=LTnewLM_340010700.1;Parent=LTnewLM_340010700 LTnewLM_34 AUGUSTUS CDS 202555 202842 0.77 + 0 ID=LTnewLM_340010700.1:CDS:1;Parent=LTnewLM_340010700.1 ### LTnewLM_34 . polypeptide 202555 202842 . + . ID=LTnewLM_340010700.1:pep;Derives_from=LTnewLM_340010700.1;orthologous_to=LTnewLM_080012100.1,LTnewLM_290036300.1,LTnewLM_310010200.1,LTnewLM_310010600.1,LTnewLM_340033900.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 204790 205391 0.71 + . ID=LTnewLM_340010800 LTnewLM_34 AUGUSTUS mRNA 204790 205391 0.71 + . ID=LTnewLM_340010800.1;Parent=LTnewLM_340010800 LTnewLM_34 AUGUSTUS CDS 204790 204894 0.88 + 0 ID=LTnewLM_340010800.1:CDS:1;Parent=LTnewLM_340010800.1 LTnewLM_34 AUGUSTUS CDS 204957 205391 0.72 + 0 ID=LTnewLM_340010800.1:CDS:2;Parent=LTnewLM_340010800.1 ### LTnewLM_34 . polypeptide 204790 205391 . + . ID=LTnewLM_340010800.1:pep;Derives_from=LTnewLM_340010800.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 205036 205242 . + . Parent=LTnewLM_340010800.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 208556 209305 0.66 + . ID=LTnewLM_340010900 LTnewLM_34 AUGUSTUS mRNA 208556 209305 0.66 + . ID=LTnewLM_340010900.1;Parent=LTnewLM_340010900 LTnewLM_34 AUGUSTUS CDS 208556 209305 0.66 + 0 ID=LTnewLM_340010900.1:CDS:1;Parent=LTnewLM_340010900.1 ### LTnewLM_34 . polypeptide 208556 209305 . + . ID=LTnewLM_340010900.1:pep;Derives_from=LTnewLM_340010900.1;orthologous_to=LTnewLM_120012300.1,LTnewLM_290009500.1;ortholog_cluster=OG0000323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 211221 213929 1 + . ID=LTnewLM_340011000 LTnewLM_34 AUGUSTUS mRNA 211221 213929 1 + . ID=LTnewLM_340011000.1;Parent=LTnewLM_340011000 LTnewLM_34 AUGUSTUS CDS 211221 213929 1 + 0 ID=LTnewLM_340011000.1:CDS:1;Parent=LTnewLM_340011000.1 ### LTnewLM_34 . polypeptide 211221 213929 . + . ID=LTnewLM_340011000.1:pep;Derives_from=LTnewLM_340011000.1;orthologous_to=LmjF.34.0510_mRNA;ortholog_cluster=OG0005358;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 215288 220387 0.94 + . ID=LTnewLM_340011100 LTnewLM_34 AUGUSTUS mRNA 215288 220387 0.94 + . ID=LTnewLM_340011100.1;Parent=LTnewLM_340011100 LTnewLM_34 AUGUSTUS CDS 215288 220387 0.94 + 0 ID=LTnewLM_340011100.1:CDS:1;Parent=LTnewLM_340011100.1 ### LTnewLM_34 . polypeptide 215288 220387 . + . ID=LTnewLM_340011100.1:pep;Derives_from=LTnewLM_340011100.1;orthologous_to=LmjF.34.0520_mRNA;ortholog_cluster=OG0005359;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 221675 223690 1 + . ID=LTnewLM_340011200 LTnewLM_34 AUGUSTUS mRNA 221675 223690 1 + . ID=LTnewLM_340011200.1;Parent=LTnewLM_340011200 LTnewLM_34 AUGUSTUS CDS 221675 223690 1 + 0 ID=LTnewLM_340011200.1:CDS:1;Parent=LTnewLM_340011200.1 ### LTnewLM_34 . polypeptide 221675 223690 . + . ID=LTnewLM_340011200.1:pep;Derives_from=LTnewLM_340011200.1;orthologous_to=LmjF.34.0530_mRNA;ortholog_cluster=OG0005360;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 224545 227917 . + . ID=LTnewLM_340011300:pseudogene;coverage=0.989;sequence_ID=0.894;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0540_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 224545 227917 . + . ID=LTnewLM_340011300.1;Parent=LTnewLM_340011300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 226386 227917 . + . ID=LTnewLM_340011300.1:pseudogenic_exon:1;Parent=LTnewLM_340011300.1;extra_copy_number=0 LTnewLM_34 . pseudogenic_transcript 226676 227917 . + . ID=LTnewLM_340011300.2;Parent=LTnewLM_340011300:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 226748 227917 . + . ID=LTnewLM_340011300.2:pseudogenic_exon:1;Parent=LTnewLM_340011300.2;extra_copy_number=0 ### LTnewLM_34 . polypeptide 226386 227917 . + . ID=LTnewLM_340011300.1:pep;Derives_from=LTnewLM_340011300.1;product=term%3Dhypothetical protein ### LTnewLM_34 . polypeptide 226748 227917 . + . ID=LTnewLM_340011300.2:pep;Derives_from=LTnewLM_340011300.2;orthologous_to=LmjF.34.0540.1_mRNA,LmjF.34.0540.2_mRNA;ortholog_cluster=OG0000542;product=term%3DSoluble NSF attachment protein%2C SNAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14938 LTnewLM_34 Pfam protein_match 226823 227194 . + . Parent=LTnewLM_340011300.2:pep;Name=PF14938;signature_desc=Soluble NSF attachment protein%2C SNAP ### LTnewLM_34 AUGUSTUS gene 230072 231937 1 + . ID=LTnewLM_340011400 LTnewLM_34 AUGUSTUS mRNA 230072 231937 1 + . ID=LTnewLM_340011400.1;Parent=LTnewLM_340011400 LTnewLM_34 AUGUSTUS CDS 230072 231937 1 + 0 ID=LTnewLM_340011400.1:CDS:1;Parent=LTnewLM_340011400.1 ### LTnewLM_34 . polypeptide 230072 231937 . + . ID=LTnewLM_340011400.1:pep;Derives_from=LTnewLM_340011400.1;orthologous_to=LmjF.34.0550_mRNA;ortholog_cluster=OG0005361;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 239973 245612 1 + . ID=LTnewLM_340011500 LTnewLM_34 AUGUSTUS mRNA 239973 245612 1 + . ID=LTnewLM_340011500.1;Parent=LTnewLM_340011500 LTnewLM_34 AUGUSTUS CDS 239973 245612 1 + 0 ID=LTnewLM_340011500.1:CDS:1;Parent=LTnewLM_340011500.1 ### LTnewLM_34 . polypeptide 239973 245612 . + . ID=LTnewLM_340011500.1:pep;Derives_from=LTnewLM_340011500.1;orthologous_to=LmjF.34.0560_mRNA;ortholog_cluster=OG0005362;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 247232 249736 1 + . ID=LTnewLM_340011600 LTnewLM_34 AUGUSTUS mRNA 247232 249736 1 + . ID=LTnewLM_340011600.1;Parent=LTnewLM_340011600 LTnewLM_34 AUGUSTUS CDS 247232 249736 1 + 0 ID=LTnewLM_340011600.1:CDS:1;Parent=LTnewLM_340011600.1 ### LTnewLM_34 . polypeptide 247232 249736 . + . ID=LTnewLM_340011600.1:pep;Derives_from=LTnewLM_340011600.1;orthologous_to=LmjF.34.0570_mRNA;ortholog_cluster=OG0005363;product=term%3DElongation factor Tu GTP binding domain/Elongation factor G C-terminus/GTP-binding protein LepA C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF00679|Pfam:PF06421;Ontology_term=GO:0003924,GO:0005525 LTnewLM_34 Pfam protein_match 247622 248161 . + . Parent=LTnewLM_340011600.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_34 Pfam protein_match 249122 249382 . + . Parent=LTnewLM_340011600.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_34 Pfam protein_match 249392 249712 . + . Parent=LTnewLM_340011600.1:pep;Name=PF06421;signature_desc=GTP-binding protein LepA C-terminus ### LTnewLM_34 AUGUSTUS gene 250570 250938 1 + . ID=LTnewLM_340011700 LTnewLM_34 AUGUSTUS mRNA 250570 250938 1 + . ID=LTnewLM_340011700.1;Parent=LTnewLM_340011700 LTnewLM_34 AUGUSTUS CDS 250570 250938 1 + 0 ID=LTnewLM_340011700.1:CDS:1;Parent=LTnewLM_340011700.1 ### LTnewLM_34 . polypeptide 250570 250938 . + . ID=LTnewLM_340011700.1:pep;Derives_from=LTnewLM_340011700.1;orthologous_to=LmjF.34.0580_mRNA;ortholog_cluster=OG0005364;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 252034 255770 1.29 + . ID=LTnewLM_340011800 LTnewLM_34 AUGUSTUS mRNA 252034 255770 0.37 + . ID=LTnewLM_340011800.1;Parent=LTnewLM_340011800 LTnewLM_34 AUGUSTUS CDS 252034 252814 0.65 + 0 ID=LTnewLM_340011800.1:CDS:1;Parent=LTnewLM_340011800.1 LTnewLM_34 AUGUSTUS CDS 252883 255770 0.48 + 2 ID=LTnewLM_340011800.1:CDS:2;Parent=LTnewLM_340011800.1 LTnewLM_34 AUGUSTUS mRNA 253293 255770 0.92 + . ID=LTnewLM_340011800.2;Parent=LTnewLM_340011800 LTnewLM_34 AUGUSTUS CDS 253293 255770 0.92 + 0 ID=LTnewLM_340011800.2:CDS:1;Parent=LTnewLM_340011800.2 ### LTnewLM_34 . polypeptide 252034 255770 . + . ID=LTnewLM_340011800.1:pep;Derives_from=LTnewLM_340011800.1;orthologous_to=LTnewLM_340011800.2,LmjF.34.0590_mRNA;ortholog_cluster=OG0000453;product=term%3DNuclear cap binding complex subunit CBP110%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19042 LTnewLM_34 Pfam protein_match 252130 255693 . + . Parent=LTnewLM_340011800.1:pep;Name=PF19042;signature_desc=Nuclear cap binding complex subunit CBP110 ### LTnewLM_34 . polypeptide 253293 255770 . + . ID=LTnewLM_340011800.2:pep;Derives_from=LTnewLM_340011800.2;orthologous_to=LTnewLM_340011800.1,LmjF.34.0590_mRNA;ortholog_cluster=OG0000453;product=term%3DNuclear cap binding complex subunit CBP110%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19042 LTnewLM_34 Pfam protein_match 253293 255761 . + . Parent=LTnewLM_340011800.2:pep;Name=PF19042;signature_desc=Nuclear cap binding complex subunit CBP110 ### LTnewLM_34 AUGUSTUS gene 256791 259328 1 + . ID=LTnewLM_340011900 LTnewLM_34 AUGUSTUS mRNA 256791 259328 1 + . ID=LTnewLM_340011900.1;Parent=LTnewLM_340011900 LTnewLM_34 AUGUSTUS CDS 256791 259328 1 + 0 ID=LTnewLM_340011900.1:CDS:1;Parent=LTnewLM_340011900.1 ### LTnewLM_34 . polypeptide 256791 259328 . + . ID=LTnewLM_340011900.1:pep;Derives_from=LTnewLM_340011900.1;orthologous_to=LmjF.34.0600_mRNA;ortholog_cluster=OG0005365;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 261008 261961 1 + . ID=LTnewLM_340012000 LTnewLM_34 AUGUSTUS mRNA 261008 261961 1 + . ID=LTnewLM_340012000.1;Parent=LTnewLM_340012000 LTnewLM_34 AUGUSTUS CDS 261008 261961 1 + 0 ID=LTnewLM_340012000.1:CDS:1;Parent=LTnewLM_340012000.1 ### LTnewLM_34 . polypeptide 261008 261961 . + . ID=LTnewLM_340012000.1:pep;Derives_from=LTnewLM_340012000.1;orthologous_to=LmjF.34.0610_mRNA;ortholog_cluster=OG0005366;product=term%3DNitronate monooxygenase/FMN-dependent dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03060|Pfam:PF01070;Ontology_term=GO:0055114,GO:0018580,GO:0016491 LTnewLM_34 Pfam protein_match 261020 261232 . + . Parent=LTnewLM_340012000.1:pep;Name=PF03060;signature_desc=Nitronate monooxygenase;Ontology_term=GO:0018580,GO:0055114 LTnewLM_34 Pfam protein_match 261248 261916 . + . Parent=LTnewLM_340012000.1:pep;Name=PF03060;signature_desc=Nitronate monooxygenase;Ontology_term=GO:0018580,GO:0055114 LTnewLM_34 Pfam protein_match 261374 261604 . + . Parent=LTnewLM_340012000.1:pep;Name=PF01070;signature_desc=FMN-dependent dehydrogenase;Ontology_term=GO:0016491 ### LTnewLM_34 AUGUSTUS gene 262813 263049 0.75 + . ID=LTnewLM_340012100 LTnewLM_34 AUGUSTUS mRNA 262813 263049 0.75 + . ID=LTnewLM_340012100.1;Parent=LTnewLM_340012100 LTnewLM_34 AUGUSTUS CDS 262813 263049 0.75 + 0 ID=LTnewLM_340012100.1:CDS:1;Parent=LTnewLM_340012100.1 ### LTnewLM_34 . polypeptide 262813 263049 . + . ID=LTnewLM_340012100.1:pep;Derives_from=LTnewLM_340012100.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 263973 264551 1 + . ID=LTnewLM_340012200 LTnewLM_34 AUGUSTUS mRNA 263973 264551 1 + . ID=LTnewLM_340012200.1;Parent=LTnewLM_340012200 LTnewLM_34 AUGUSTUS CDS 263973 264551 1 + 0 ID=LTnewLM_340012200.1:CDS:1;Parent=LTnewLM_340012200.1 ### LTnewLM_34 . polypeptide 263973 264551 . + . ID=LTnewLM_340012200.1:pep;Derives_from=LTnewLM_340012200.1;orthologous_to=LTnewLM_170018700.1,LTnewLM_320005400.1;ortholog_cluster=OG0000357;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 265262 266005 0.9 + . ID=LTnewLM_340012300 LTnewLM_34 AUGUSTUS mRNA 265262 266005 0.9 + . ID=LTnewLM_340012300.1;Parent=LTnewLM_340012300 LTnewLM_34 AUGUSTUS CDS 265262 266005 0.9 + 0 ID=LTnewLM_340012300.1:CDS:1;Parent=LTnewLM_340012300.1 ### LTnewLM_34 . polypeptide 265262 266005 . + . ID=LTnewLM_340012300.1:pep;Derives_from=LTnewLM_340012300.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 269575 276753 1 + . ID=LTnewLM_340012400 LTnewLM_34 AUGUSTUS mRNA 269575 276753 1 + . ID=LTnewLM_340012400.1;Parent=LTnewLM_340012400 LTnewLM_34 AUGUSTUS CDS 269575 276753 1 + 0 ID=LTnewLM_340012400.1:CDS:1;Parent=LTnewLM_340012400.1 ### LTnewLM_34 . polypeptide 269575 276753 . + . ID=LTnewLM_340012400.1:pep;Derives_from=LTnewLM_340012400.1;orthologous_to=LmjF.34.0620_mRNA;ortholog_cluster=OG0005367;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 278168 281161 1 + . ID=LTnewLM_340012500 LTnewLM_34 AUGUSTUS mRNA 278168 281161 1 + . ID=LTnewLM_340012500.1;Parent=LTnewLM_340012500 LTnewLM_34 AUGUSTUS CDS 278168 281161 1 + 0 ID=LTnewLM_340012500.1:CDS:1;Parent=LTnewLM_340012500.1 ### LTnewLM_34 . polypeptide 278168 281161 . + . ID=LTnewLM_340012500.1:pep;Derives_from=LTnewLM_340012500.1;orthologous_to=LmjF.34.0630_mRNA;ortholog_cluster=OG0005368;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 282228 285362 1 + . ID=LTnewLM_340012600 LTnewLM_34 AUGUSTUS mRNA 282228 285362 1 + . ID=LTnewLM_340012600.1;Parent=LTnewLM_340012600 LTnewLM_34 AUGUSTUS CDS 282228 285362 1 + 0 ID=LTnewLM_340012600.1:CDS:1;Parent=LTnewLM_340012600.1 ### LTnewLM_34 . polypeptide 282228 285362 . + . ID=LTnewLM_340012600.1:pep;Derives_from=LTnewLM_340012600.1;orthologous_to=LmjF.34.0640_mRNA;ortholog_cluster=OG0005369;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 287436 288365 1 + . ID=LTnewLM_340012700 LTnewLM_34 AUGUSTUS mRNA 287436 288365 1 + . ID=LTnewLM_340012700.1;Parent=LTnewLM_340012700 LTnewLM_34 AUGUSTUS CDS 287436 288365 1 + 0 ID=LTnewLM_340012700.1:CDS:1;Parent=LTnewLM_340012700.1 ### LTnewLM_34 . polypeptide 287436 288365 . + . ID=LTnewLM_340012700.1:pep;Derives_from=LTnewLM_340012700.1;orthologous_to=LmjF.34.0650_mRNA;ortholog_cluster=OG0005370;product=term%3DJAB1/Mov34/MPN/PAD-1 ubiquitin protease/Prokaryotic homologs of the JAB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01398|Pfam:PF14464;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 287514 287843 . + . Parent=LTnewLM_340012700.1:pep;Name=PF01398;signature_desc=JAB1/Mov34/MPN/PAD-1 ubiquitin protease;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 287544 287825 . + . Parent=LTnewLM_340012700.1:pep;Name=PF14464;signature_desc=Prokaryotic homologs of the JAB domain ### LTnewLM_34 . pseudogene 290174 293879 . + . ID=LTnewLM_340012800:pseudogene;coverage=0.997;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0660_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 290174 293879 . + . ID=LTnewLM_340012800.1;Parent=LTnewLM_340012800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 290174 293879 . + . ID=LTnewLM_340012800.1:pseudogenic_exon:1;Parent=LTnewLM_340012800.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 290174 293879 . + . ID=LTnewLM_340012800.1:pep;Derives_from=LTnewLM_340012800.1;orthologous_to=LmjF.34.0660_mRNA;ortholog_cluster=OG0007642;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 296231 302497 1 + . ID=LTnewLM_340012900 LTnewLM_34 AUGUSTUS mRNA 296231 302497 1 + . ID=LTnewLM_340012900.1;Parent=LTnewLM_340012900 LTnewLM_34 AUGUSTUS CDS 296231 302497 1 + 0 ID=LTnewLM_340012900.1:CDS:1;Parent=LTnewLM_340012900.1 ### LTnewLM_34 . polypeptide 296231 302497 . + . ID=LTnewLM_340012900.1:pep;Derives_from=LTnewLM_340012900.1;orthologous_to=LmjF.34.0670_mRNA;ortholog_cluster=OG0005371;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_34 Pfam protein_match 298358 298879 . + . Parent=LTnewLM_340012900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_34 Pfam protein_match 299315 299806 . + . Parent=LTnewLM_340012900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 300617 301255 . + . Parent=LTnewLM_340012900.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_34 Pfam protein_match 301574 302245 . + . Parent=LTnewLM_340012900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_34 AUGUSTUS gene 308697 313339 1.46 - . ID=LTnewLM_340013000 LTnewLM_34 AUGUSTUS mRNA 308697 313339 0.93 - . ID=LTnewLM_340013000.1;Parent=LTnewLM_340013000 LTnewLM_34 AUGUSTUS CDS 308697 310946 0.97 - 0 ID=LTnewLM_340013000.1:CDS:1;Parent=LTnewLM_340013000.1 LTnewLM_34 AUGUSTUS CDS 311000 313339 0.96 - 0 ID=LTnewLM_340013000.1:CDS:2;Parent=LTnewLM_340013000.1 LTnewLM_34 AUGUSTUS mRNA 310693 313339 0.53 - . ID=LTnewLM_340013000.2;Parent=LTnewLM_340013000 LTnewLM_34 AUGUSTUS CDS 310693 310705 1 - 1 ID=LTnewLM_340013000.2:CDS:1;Parent=LTnewLM_340013000.2 LTnewLM_34 AUGUSTUS CDS 310773 313339 0.53 - 0 ID=LTnewLM_340013000.2:CDS:2;Parent=LTnewLM_340013000.2 ### LTnewLM_34 . polypeptide 308697 313339 . - . ID=LTnewLM_340013000.1:pep;Derives_from=LTnewLM_340013000.1;orthologous_to=LTnewLM_340013000.2;ortholog_cluster=OG0005372;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 310693 313339 . - . ID=LTnewLM_340013000.2:pep;Derives_from=LTnewLM_340013000.2;orthologous_to=LTnewLM_340013000.1;ortholog_cluster=OG0005372;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 313956 315362 1 - . ID=LTnewLM_340013100 LTnewLM_34 AUGUSTUS mRNA 313956 315362 1 - . ID=LTnewLM_340013100.1;Parent=LTnewLM_340013100 LTnewLM_34 AUGUSTUS CDS 313956 315362 1 - 0 ID=LTnewLM_340013100.1:CDS:1;Parent=LTnewLM_340013100.1 ### LTnewLM_34 . polypeptide 313956 315362 . - . ID=LTnewLM_340013100.1:pep;Derives_from=LTnewLM_340013100.1;orthologous_to=LTnewLM_340013200.1,LmjF.34.0680_mRNA,LmjF.34.0690_mRNA;ortholog_cluster=OG0000240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 317620 329160 . - . ID=LTnewLM_340013200:pseudogene;coverage=0.976;sequence_ID=0.723;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0690_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 317620 329160 . - . ID=LTnewLM_340013200.1;Parent=LTnewLM_340013200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 317620 329160 . - . ID=LTnewLM_340013200.1:pseudogenic_exon:1;Parent=LTnewLM_340013200.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 317620 329160 . - . ID=LTnewLM_340013200.1:pep;Derives_from=LTnewLM_340013200.1;orthologous_to=LTnewLM_340013100.1,LmjF.34.0680_mRNA,LmjF.34.0690_mRNA;ortholog_cluster=OG0000240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 332566 333253 . + . ID=LTnewLM_340013300:pseudogene;coverage=0.997;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0700_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 332566 333253 . + . ID=LTnewLM_340013300.1;Parent=LTnewLM_340013300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 332566 333253 . + . ID=LTnewLM_340013300.1:pseudogenic_exon:1;Parent=LTnewLM_340013300.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 332566 333253 . + . ID=LTnewLM_340013300.1:pep;Derives_from=LTnewLM_340013300.1;product=term%3Dhypothetical protein ### LTnewLM_34 Liftoff gene 333612 334094 . + . ID=LTnewLM_340013400;coverage=1.0;sequence_ID=0.964;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0705_0 LTnewLM_34 Liftoff mRNA 333612 334094 . + . ID=LTnewLM_340013400.1;Parent=LTnewLM_340013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 333612 334094 . + 0 ID=LTnewLM_340013400.1:CDS:1;Parent=LTnewLM_340013400.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 333612 334094 . + . ID=LTnewLM_340013400.1:pep;Derives_from=LTnewLM_340013400.1;orthologous_to=LmjF.34.0705_mRNA;ortholog_cluster=OG0005373;product=term%3DPredicted membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09799 LTnewLM_34 Pfam protein_match 333672 333968 . + . Parent=LTnewLM_340013400.1:pep;Name=PF09799;signature_desc=Predicted membrane protein ### LTnewLM_34 . pseudogene 335059 336942 . + . ID=LTnewLM_340013500:pseudogene;coverage=1.0;sequence_ID=0.954;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0710_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 335059 336942 . + . ID=LTnewLM_340013500.1;Parent=LTnewLM_340013500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 335059 336942 . + . ID=LTnewLM_340013500.1:pseudogenic_exon:1;Parent=LTnewLM_340013500.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 335059 336942 . + . ID=LTnewLM_340013500.1:pep;Derives_from=LTnewLM_340013500.1;orthologous_to=LmjF.34.0710_mRNA;ortholog_cluster=OG0007643;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 337428 338918 1 + . ID=LTnewLM_340013600 LTnewLM_34 AUGUSTUS mRNA 337428 338918 1 + . ID=LTnewLM_340013600.1;Parent=LTnewLM_340013600 LTnewLM_34 AUGUSTUS CDS 337428 338918 1 + 0 ID=LTnewLM_340013600.1:CDS:1;Parent=LTnewLM_340013600.1 ### LTnewLM_34 . polypeptide 337428 338918 . + . ID=LTnewLM_340013600.1:pep;Derives_from=LTnewLM_340013600.1;orthologous_to=LmjF.34.0720_mRNA;ortholog_cluster=OG0005374;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 340342 341184 1 + . ID=LTnewLM_340013700 LTnewLM_34 AUGUSTUS mRNA 340342 341184 1 + . ID=LTnewLM_340013700.1;Parent=LTnewLM_340013700 LTnewLM_34 AUGUSTUS CDS 340342 341184 1 + 0 ID=LTnewLM_340013700.1:CDS:1;Parent=LTnewLM_340013700.1 ### LTnewLM_34 . polypeptide 340342 341184 . + . ID=LTnewLM_340013700.1:pep;Derives_from=LTnewLM_340013700.1;orthologous_to=LmjF.34.0730_mRNA;ortholog_cluster=OG0005375;product=term%3DStage II sporulation protein E (SpoIIE)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07228;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 340471 341109 . + . Parent=LTnewLM_340013700.1:pep;Name=PF07228;signature_desc=Stage II sporulation protein E (SpoIIE);Ontology_term=GO:0003824 ### LTnewLM_34 AUGUSTUS gene 342264 343670 1 + . ID=LTnewLM_340013800 LTnewLM_34 AUGUSTUS mRNA 342264 343670 1 + . ID=LTnewLM_340013800.1;Parent=LTnewLM_340013800 LTnewLM_34 AUGUSTUS CDS 342264 343670 1 + 0 ID=LTnewLM_340013800.1:CDS:1;Parent=LTnewLM_340013800.1 ### LTnewLM_34 . polypeptide 342264 343670 . + . ID=LTnewLM_340013800.1:pep;Derives_from=LTnewLM_340013800.1;orthologous_to=LmjF.34.0740_mRNA;ortholog_cluster=OG0005376;product=term%3DCBF/Mak21 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03914 LTnewLM_34 Pfam protein_match 342966 343496 . + . Parent=LTnewLM_340013800.1:pep;Name=PF03914;signature_desc=CBF/Mak21 family ### LTnewLM_34 AUGUSTUS gene 344715 346241 1 + . ID=LTnewLM_340013900 LTnewLM_34 AUGUSTUS mRNA 344715 346241 1 + . ID=LTnewLM_340013900.1;Parent=LTnewLM_340013900 LTnewLM_34 AUGUSTUS CDS 344715 346241 1 + 0 ID=LTnewLM_340013900.1:CDS:1;Parent=LTnewLM_340013900.1 ### LTnewLM_34 . polypeptide 344715 346241 . + . ID=LTnewLM_340013900.1:pep;Derives_from=LTnewLM_340013900.1;orthologous_to=LmjF.34.0750_mRNA;ortholog_cluster=OG0005377;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 348160 349569 1 + . ID=LTnewLM_340014000 LTnewLM_34 AUGUSTUS mRNA 348160 349569 1 + . ID=LTnewLM_340014000.1;Parent=LTnewLM_340014000 LTnewLM_34 AUGUSTUS CDS 348160 349569 1 + 0 ID=LTnewLM_340014000.1:CDS:1;Parent=LTnewLM_340014000.1 ### LTnewLM_34 . polypeptide 348160 349569 . + . ID=LTnewLM_340014000.1:pep;Derives_from=LTnewLM_340014000.1;orthologous_to=LmjF.34.0760_mRNA;ortholog_cluster=OG0005378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 350520 351158 1 + . ID=LTnewLM_340014100 LTnewLM_34 AUGUSTUS mRNA 350520 351158 1 + . ID=LTnewLM_340014100.1;Parent=LTnewLM_340014100 LTnewLM_34 AUGUSTUS CDS 350520 351158 1 + 0 ID=LTnewLM_340014100.1:CDS:1;Parent=LTnewLM_340014100.1 ### LTnewLM_34 . polypeptide 350520 351158 . + . ID=LTnewLM_340014100.1:pep;Derives_from=LTnewLM_340014100.1;orthologous_to=LmjF.34.0770_mRNA;ortholog_cluster=OG0005379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 355298 356191 . + . ID=LTnewLM_340014200;coverage=0.996;sequence_ID=0.971;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0780_0 LTnewLM_34 Liftoff mRNA 355298 356191 . + . ID=LTnewLM_340014200.1;Parent=LTnewLM_340014200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 355298 356191 . + 0 ID=LTnewLM_340014200.1:CDS:1;Parent=LTnewLM_340014200.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 355298 356191 . + . ID=LTnewLM_340014200.1:pep;Derives_from=LTnewLM_340014200.1;orthologous_to=LTnewLM_340014400.1,LTnewLM_340014500.1,LmjF.34.0780_mRNA,LmjF.34.0800_mRNA,LmjF.34.0810_mRNA;ortholog_cluster=OG0000067;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 355322 355450 . + . Parent=LTnewLM_340014200.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain LTnewLM_34 Pfam protein_match 355463 356032 . + . Parent=LTnewLM_340014200.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 360284 361198 1 + . ID=LTnewLM_340014300 LTnewLM_34 AUGUSTUS mRNA 360284 361198 1 + . ID=LTnewLM_340014300.1;Parent=LTnewLM_340014300 LTnewLM_34 AUGUSTUS CDS 360284 361198 1 + 0 ID=LTnewLM_340014300.1:CDS:1;Parent=LTnewLM_340014300.1 ### LTnewLM_34 . polypeptide 360284 361198 . + . ID=LTnewLM_340014300.1:pep;Derives_from=LTnewLM_340014300.1;orthologous_to=LmjF.34.0790_mRNA;ortholog_cluster=OG0005380;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 360326 360457 . + . Parent=LTnewLM_340014300.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain LTnewLM_34 Pfam protein_match 360470 361042 . + . Parent=LTnewLM_340014300.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 364328 365230 1 + . ID=LTnewLM_340014400 LTnewLM_34 AUGUSTUS mRNA 364328 365230 1 + . ID=LTnewLM_340014400.1;Parent=LTnewLM_340014400 LTnewLM_34 AUGUSTUS CDS 364328 365230 1 + 0 ID=LTnewLM_340014400.1:CDS:1;Parent=LTnewLM_340014400.1 ### LTnewLM_34 . polypeptide 364328 365230 . + . ID=LTnewLM_340014400.1:pep;Derives_from=LTnewLM_340014400.1;orthologous_to=LTnewLM_340014200.1,LTnewLM_340014500.1,LmjF.34.0780_mRNA,LmjF.34.0800_mRNA,LmjF.34.0810_mRNA;ortholog_cluster=OG0000067;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 364352 364489 . + . Parent=LTnewLM_340014400.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain LTnewLM_34 Pfam protein_match 364502 365071 . + . Parent=LTnewLM_340014400.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 367916 368821 1 + . ID=LTnewLM_340014500 LTnewLM_34 AUGUSTUS mRNA 367916 368821 1 + . ID=LTnewLM_340014500.1;Parent=LTnewLM_340014500 LTnewLM_34 AUGUSTUS CDS 367916 368821 1 + 0 ID=LTnewLM_340014500.1:CDS:1;Parent=LTnewLM_340014500.1 ### LTnewLM_34 . polypeptide 367916 368821 . + . ID=LTnewLM_340014500.1:pep;Derives_from=LTnewLM_340014500.1;orthologous_to=LTnewLM_340014200.1,LTnewLM_340014400.1,LmjF.34.0780_mRNA,LmjF.34.0800_mRNA,LmjF.34.0810_mRNA;ortholog_cluster=OG0000067;product=term%3DSerine-threonine protein phosphatase N-terminal domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16891|Pfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 367943 368080 . + . Parent=LTnewLM_340014500.1:pep;Name=PF16891;signature_desc=Serine-threonine protein phosphatase N-terminal domain LTnewLM_34 Pfam protein_match 368093 368662 . + . Parent=LTnewLM_340014500.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 374090 374467 1 + . ID=LTnewLM_340014600 LTnewLM_34 AUGUSTUS mRNA 374090 374467 1 + . ID=LTnewLM_340014600.1;Parent=LTnewLM_340014600 LTnewLM_34 AUGUSTUS CDS 374090 374467 1 + 0 ID=LTnewLM_340014600.1:CDS:1;Parent=LTnewLM_340014600.1 ### LTnewLM_34 . polypeptide 374090 374467 . + . ID=LTnewLM_340014600.1:pep;Derives_from=LTnewLM_340014600.1;orthologous_to=LmjF.34.0815_mRNA;ortholog_cluster=OG0005381;product=term%3DTranscription factor Pcc1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09341 LTnewLM_34 Pfam protein_match 374177 374398 . + . Parent=LTnewLM_340014600.1:pep;Name=PF09341;signature_desc=Transcription factor Pcc1 ### LTnewLM_34 AUGUSTUS gene 375255 375968 1 + . ID=LTnewLM_340014700 LTnewLM_34 AUGUSTUS mRNA 375255 375968 1 + . ID=LTnewLM_340014700.1;Parent=LTnewLM_340014700 LTnewLM_34 AUGUSTUS CDS 375255 375968 1 + 0 ID=LTnewLM_340014700.1:CDS:1;Parent=LTnewLM_340014700.1 ### LTnewLM_34 . polypeptide 375255 375968 . + . ID=LTnewLM_340014700.1:pep;Derives_from=LTnewLM_340014700.1;orthologous_to=LTnewLM_340014900.1,LmjF.34.0820_mRNA,LmjF.34.0840_mRNA;ortholog_cluster=OG0000241;product=term%3DEF-1 guanine nucleotide exchange domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00736;Ontology_term=GO:0003746,GO:0005853,GO:0006414 LTnewLM_34 Pfam protein_match 375711 375962 . + . Parent=LTnewLM_340014700.1:pep;Name=PF00736;signature_desc=EF-1 guanine nucleotide exchange domain;Ontology_term=GO:0003746,GO:0006414,GO:0005853 ### LTnewLM_34 AUGUSTUS gene 378147 378380 1 + . ID=LTnewLM_340014800 LTnewLM_34 AUGUSTUS mRNA 378147 378380 1 + . ID=LTnewLM_340014800.1;Parent=LTnewLM_340014800 LTnewLM_34 AUGUSTUS CDS 378147 378380 1 + 0 ID=LTnewLM_340014800.1:CDS:1;Parent=LTnewLM_340014800.1 ### LTnewLM_34 . polypeptide 378147 378380 . + . ID=LTnewLM_340014800.1:pep;Derives_from=LTnewLM_340014800.1;orthologous_to=LmjF.34.0830_mRNA;ortholog_cluster=OG0005382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 381476 382189 1 + . ID=LTnewLM_340014900 LTnewLM_34 AUGUSTUS mRNA 381476 382189 1 + . ID=LTnewLM_340014900.1;Parent=LTnewLM_340014900 LTnewLM_34 AUGUSTUS CDS 381476 382189 1 + 0 ID=LTnewLM_340014900.1:CDS:1;Parent=LTnewLM_340014900.1 ### LTnewLM_34 . polypeptide 381476 382189 . + . ID=LTnewLM_340014900.1:pep;Derives_from=LTnewLM_340014900.1;orthologous_to=LTnewLM_340014700.1,LmjF.34.0820_mRNA,LmjF.34.0840_mRNA;ortholog_cluster=OG0000241;product=term%3DEF-1 guanine nucleotide exchange domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00736;Ontology_term=GO:0003746,GO:0005853,GO:0006414 LTnewLM_34 Pfam protein_match 381932 382183 . + . Parent=LTnewLM_340014900.1:pep;Name=PF00736;signature_desc=EF-1 guanine nucleotide exchange domain;Ontology_term=GO:0003746,GO:0006414,GO:0005853 ### LTnewLM_34 AUGUSTUS gene 384857 386128 1 + . ID=LTnewLM_340015000 LTnewLM_34 AUGUSTUS mRNA 384857 386128 1 + . ID=LTnewLM_340015000.1;Parent=LTnewLM_340015000 LTnewLM_34 AUGUSTUS CDS 384857 386128 1 + 0 ID=LTnewLM_340015000.1:CDS:1;Parent=LTnewLM_340015000.1 ### LTnewLM_34 . polypeptide 384857 386128 . + . ID=LTnewLM_340015000.1:pep;Derives_from=LTnewLM_340015000.1;orthologous_to=LmjF.34.0850_mRNA;ortholog_cluster=OG0005383;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 385397 385975 . + . Parent=LTnewLM_340015000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 387737 388405 1 + . ID=LTnewLM_340015100 LTnewLM_34 AUGUSTUS mRNA 387737 388405 1 + . ID=LTnewLM_340015100.1;Parent=LTnewLM_340015100 LTnewLM_34 AUGUSTUS CDS 387737 388405 1 + 0 ID=LTnewLM_340015100.1:CDS:1;Parent=LTnewLM_340015100.1 ### LTnewLM_34 . polypeptide 387737 388405 . + . ID=LTnewLM_340015100.1:pep;Derives_from=LTnewLM_340015100.1;orthologous_to=LTnewLM_150007100.1,LmjF.34.0860_mRNA;ortholog_cluster=OG0000338;product=term%3DRibosomal protein L13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00572;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_34 Pfam protein_match 387806 388114 . + . Parent=LTnewLM_340015100.1:pep;Name=PF00572;signature_desc=Ribosomal protein L13;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 389326 391008 1 + . ID=LTnewLM_340015200 LTnewLM_34 AUGUSTUS mRNA 389326 391008 1 + . ID=LTnewLM_340015200.1;Parent=LTnewLM_340015200 LTnewLM_34 AUGUSTUS CDS 389326 391008 1 + 0 ID=LTnewLM_340015200.1:CDS:1;Parent=LTnewLM_340015200.1 ### LTnewLM_34 . polypeptide 389326 391008 . + . ID=LTnewLM_340015200.1:pep;Derives_from=LTnewLM_340015200.1;orthologous_to=LmjF.34.0870_mRNA;ortholog_cluster=OG0005384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 392007 395108 . + . ID=LTnewLM_340015300;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0880_0 LTnewLM_34 Liftoff mRNA 392007 395108 . + . ID=LTnewLM_340015300.1;Parent=LTnewLM_340015300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 392007 395108 . + 0 ID=LTnewLM_340015300.1:CDS:1;Parent=LTnewLM_340015300.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 392007 395108 . + . ID=LTnewLM_340015300.1:pep;Derives_from=LTnewLM_340015300.1;orthologous_to=LmjF.34.0880_mRNA;ortholog_cluster=OG0005385;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 396130 396609 1 + . ID=LTnewLM_340015400 LTnewLM_34 AUGUSTUS mRNA 396130 396609 1 + . ID=LTnewLM_340015400.1;Parent=LTnewLM_340015400 LTnewLM_34 AUGUSTUS CDS 396130 396609 1 + 0 ID=LTnewLM_340015400.1:CDS:1;Parent=LTnewLM_340015400.1 ### LTnewLM_34 . polypeptide 396130 396609 . + . ID=LTnewLM_340015400.1:pep;Derives_from=LTnewLM_340015400.1;orthologous_to=LmjF.34.0890_mRNA;ortholog_cluster=OG0005386;product=term%3DRNA polymerase Rpb6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01192;Ontology_term=GO:0006351,GO:0003899,GO:0003677 LTnewLM_34 Pfam protein_match 396349 396498 . + . Parent=LTnewLM_340015400.1:pep;Name=PF01192;signature_desc=RNA polymerase Rpb6;Ontology_term=GO:0003677,GO:0003899,GO:0006351 ### LTnewLM_34 . pseudogene 397508 401784 . + . ID=LTnewLM_340015500:pseudogene;coverage=0.954;sequence_ID=0.872;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0900_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 397508 401784 . + . ID=LTnewLM_340015500.1;Parent=LTnewLM_340015500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 400718 401784 . + . ID=LTnewLM_340015500.1:pseudogenic_exon:1;Parent=LTnewLM_340015500.1;extra_copy_number=0 LTnewLM_34 . pseudogenic_transcript 400834 401784 . + . ID=LTnewLM_340015500.2;Parent=LTnewLM_340015500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 400915 401784 . + . ID=LTnewLM_340015500.2:pseudogenic_exon:1;Parent=LTnewLM_340015500.2;extra_copy_number=0 ### LTnewLM_34 . polypeptide 400718 401784 . + . ID=LTnewLM_340015500.1:pep;Derives_from=LTnewLM_340015500.1;product=term%3Dhypothetical protein ### LTnewLM_34 . polypeptide 400915 401784 . + . ID=LTnewLM_340015500.2:pep;Derives_from=LTnewLM_340015500.2;orthologous_to=LmjF.34.0900.1_mRNA,LmjF.34.0900.2_mRNA;ortholog_cluster=OG0000543;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_34 Pfam protein_match 400945 401346 . + . Parent=LTnewLM_340015500.2:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_34 AUGUSTUS gene 402661 403164 1 + . ID=LTnewLM_340015600 LTnewLM_34 AUGUSTUS mRNA 402661 403164 1 + . ID=LTnewLM_340015600.1;Parent=LTnewLM_340015600 LTnewLM_34 AUGUSTUS CDS 402661 403164 1 + 0 ID=LTnewLM_340015600.1:CDS:1;Parent=LTnewLM_340015600.1 ### LTnewLM_34 . polypeptide 402661 403164 . + . ID=LTnewLM_340015600.1:pep;Derives_from=LTnewLM_340015600.1;orthologous_to=LmjF.34.0910_mRNA;ortholog_cluster=OG0005387;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 404879 407185 . + . ID=LTnewLM_340015700;coverage=0.996;sequence_ID=0.938;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.0920_0 LTnewLM_34 Liftoff mRNA 404879 407185 . + . ID=LTnewLM_340015700.1;Parent=LTnewLM_340015700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 404879 407185 . + 0 ID=LTnewLM_340015700.1:CDS:1;Parent=LTnewLM_340015700.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 404879 407185 . + . ID=LTnewLM_340015700.1:pep;Derives_from=LTnewLM_340015700.1;orthologous_to=LmjF.34.0920_mRNA;ortholog_cluster=OG0005388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 408248 408571 1 + . ID=LTnewLM_340015800 LTnewLM_34 AUGUSTUS mRNA 408248 408571 1 + . ID=LTnewLM_340015800.1;Parent=LTnewLM_340015800 LTnewLM_34 AUGUSTUS CDS 408248 408571 1 + 0 ID=LTnewLM_340015800.1:CDS:1;Parent=LTnewLM_340015800.1 ### LTnewLM_34 . polypeptide 408248 408571 . + . ID=LTnewLM_340015800.1:pep;Derives_from=LTnewLM_340015800.1;orthologous_to=LmjF.34.0930_mRNA;ortholog_cluster=OG0005389;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 410523 413525 1 + . ID=LTnewLM_340015900 LTnewLM_34 AUGUSTUS mRNA 410523 413525 1 + . ID=LTnewLM_340015900.1;Parent=LTnewLM_340015900 LTnewLM_34 AUGUSTUS CDS 410523 413525 1 + 0 ID=LTnewLM_340015900.1:CDS:1;Parent=LTnewLM_340015900.1 ### LTnewLM_34 . polypeptide 410523 413525 . + . ID=LTnewLM_340015900.1:pep;Derives_from=LTnewLM_340015900.1;orthologous_to=LmjF.34.0940_mRNA;ortholog_cluster=OG0005390;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_34 Pfam protein_match 412170 412640 . + . Parent=LTnewLM_340015900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 412182 412628 . + . Parent=LTnewLM_340015900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_34 Pfam protein_match 412818 413108 . + . Parent=LTnewLM_340015900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_34 AUGUSTUS gene 415694 418399 1 + . ID=LTnewLM_340016000 LTnewLM_34 AUGUSTUS mRNA 415694 418399 1 + . ID=LTnewLM_340016000.1;Parent=LTnewLM_340016000 LTnewLM_34 AUGUSTUS CDS 415694 418399 1 + 0 ID=LTnewLM_340016000.1:CDS:1;Parent=LTnewLM_340016000.1 ### LTnewLM_34 . polypeptide 415694 418399 . + . ID=LTnewLM_340016000.1:pep;Derives_from=LTnewLM_340016000.1;orthologous_to=LmjF.34.0950_mRNA;ortholog_cluster=OG0005391;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 422172 422691 0.63 + . ID=LTnewLM_340016100 LTnewLM_34 AUGUSTUS mRNA 422172 422691 0.63 + . ID=LTnewLM_340016100.1;Parent=LTnewLM_340016100 LTnewLM_34 AUGUSTUS CDS 422172 422458 0.63 + 0 ID=LTnewLM_340016100.1:CDS:1;Parent=LTnewLM_340016100.1 LTnewLM_34 AUGUSTUS CDS 422505 422691 1 + 1 ID=LTnewLM_340016100.1:CDS:2;Parent=LTnewLM_340016100.1 ### LTnewLM_34 . polypeptide 422172 422691 . + . ID=LTnewLM_340016100.1:pep;Derives_from=LTnewLM_340016100.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 422175 422558 . + . Parent=LTnewLM_340016100.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 . pseudogene 425833 426865 . + . ID=LTnewLM_340016200:pseudogene;coverage=0.771;sequence_ID=0.647;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.1080_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 425833 426865 . + . ID=LTnewLM_340016200.1;Parent=LTnewLM_340016200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 425833 426865 . + . ID=LTnewLM_340016200.1:pseudogenic_exon:1;Parent=LTnewLM_340016200.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 425833 426865 . + . ID=LTnewLM_340016200.1:pep;Derives_from=LTnewLM_340016200.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 431152 431763 1 + . ID=LTnewLM_340016300 LTnewLM_34 AUGUSTUS mRNA 431152 431763 1 + . ID=LTnewLM_340016300.1;Parent=LTnewLM_340016300 LTnewLM_34 AUGUSTUS CDS 431152 431763 1 + 0 ID=LTnewLM_340016300.1:CDS:1;Parent=LTnewLM_340016300.1 ### LTnewLM_34 . polypeptide 431152 431763 . + . ID=LTnewLM_340016300.1:pep;Derives_from=LTnewLM_340016300.1;orthologous_to=LmjF.34.0970_mRNA;ortholog_cluster=OG0005392;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 431203 431745 . + . Parent=LTnewLM_340016300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 438264 438845 1 + . ID=LTnewLM_340016400 LTnewLM_34 AUGUSTUS mRNA 438264 438845 1 + . ID=LTnewLM_340016400.1;Parent=LTnewLM_340016400 LTnewLM_34 AUGUSTUS CDS 438264 438845 1 + 0 ID=LTnewLM_340016400.1:CDS:1;Parent=LTnewLM_340016400.1 ### LTnewLM_34 . polypeptide 438264 438845 . + . ID=LTnewLM_340016400.1:pep;Derives_from=LTnewLM_340016400.1;orthologous_to=LmjF.34.0980_mRNA;ortholog_cluster=OG0005393;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 438303 438827 . + . Parent=LTnewLM_340016400.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 447757 451782 1 + . ID=LTnewLM_340016500 LTnewLM_34 AUGUSTUS mRNA 447757 451782 1 + . ID=LTnewLM_340016500.1;Parent=LTnewLM_340016500 LTnewLM_34 AUGUSTUS CDS 447757 451782 1 + 0 ID=LTnewLM_340016500.1:CDS:1;Parent=LTnewLM_340016500.1 ### LTnewLM_34 . polypeptide 447757 451782 . + . ID=LTnewLM_340016500.1:pep;Derives_from=LTnewLM_340016500.1;orthologous_to=LmjF.34.0990_mRNA;ortholog_cluster=OG0005394;product=term%3DABC transporter transmembrane region/ABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00664|Pfam:PF00005;Ontology_term=GO:0006810,GO:0005524,GO:0016887,GO:0055085,GO:0042626,GO:0016021 LTnewLM_34 Pfam protein_match 448153 448965 . + . Parent=LTnewLM_340016500.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_34 Pfam protein_match 449167 449610 . + . Parent=LTnewLM_340016500.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 450079 450897 . + . Parent=LTnewLM_340016500.1:pep;Name=PF00664;signature_desc=ABC transporter transmembrane region;Ontology_term=GO:0005524,GO:0042626,GO:0006810,GO:0055085,GO:0016021 LTnewLM_34 Pfam protein_match 451102 451545 . + . Parent=LTnewLM_340016500.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_34 AUGUSTUS gene 455418 459536 1 + . ID=LTnewLM_340016600 LTnewLM_34 AUGUSTUS mRNA 455418 459536 1 + . ID=LTnewLM_340016600.1;Parent=LTnewLM_340016600 LTnewLM_34 AUGUSTUS CDS 455418 459536 1 + 0 ID=LTnewLM_340016600.1:CDS:1;Parent=LTnewLM_340016600.1 ### LTnewLM_34 . polypeptide 455418 459536 . + . ID=LTnewLM_340016600.1:pep;Derives_from=LTnewLM_340016600.1;orthologous_to=LmjF.34.1000_mRNA;ortholog_cluster=OG0005395;product=term%3DMyosin head (motor domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00063;Ontology_term=GO:0003774,GO:0016459,GO:0005524 LTnewLM_34 Pfam protein_match 455454 456116 . + . Parent=LTnewLM_340016600.1:pep;Name=PF00063;signature_desc=Myosin head (motor domain);Ontology_term=GO:0003774,GO:0005524,GO:0016459 LTnewLM_34 Pfam protein_match 456405 457772 . + . Parent=LTnewLM_340016600.1:pep;Name=PF00063;signature_desc=Myosin head (motor domain);Ontology_term=GO:0003774,GO:0005524,GO:0016459 ### LTnewLM_34 AUGUSTUS gene 460247 462097 1 + . ID=LTnewLM_340016700 LTnewLM_34 AUGUSTUS mRNA 460247 462097 1 + . ID=LTnewLM_340016700.1;Parent=LTnewLM_340016700 LTnewLM_34 AUGUSTUS CDS 460247 462097 1 + 0 ID=LTnewLM_340016700.1:CDS:1;Parent=LTnewLM_340016700.1 ### LTnewLM_34 . polypeptide 460247 462097 . + . ID=LTnewLM_340016700.1:pep;Derives_from=LTnewLM_340016700.1;orthologous_to=LmjF.34.1010_mRNA;ortholog_cluster=OG0005396;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 462962 464332 1 + . ID=LTnewLM_340016800 LTnewLM_34 AUGUSTUS mRNA 462962 464332 1 + . ID=LTnewLM_340016800.1;Parent=LTnewLM_340016800 LTnewLM_34 AUGUSTUS CDS 462962 464332 1 + 0 ID=LTnewLM_340016800.1:CDS:1;Parent=LTnewLM_340016800.1 ### LTnewLM_34 . polypeptide 462962 464332 . + . ID=LTnewLM_340016800.1:pep;Derives_from=LTnewLM_340016800.1;orthologous_to=LmjF.34.1020_mRNA;ortholog_cluster=OG0005397;product=term%3DCarnosine N-methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07942 LTnewLM_34 Pfam protein_match 463457 464269 . + . Parent=LTnewLM_340016800.1:pep;Name=PF07942;signature_desc=Carnosine N-methyltransferase ### LTnewLM_34 AUGUSTUS gene 468480 469637 1 + . ID=LTnewLM_340016900 LTnewLM_34 AUGUSTUS mRNA 468480 469637 1 + . ID=LTnewLM_340016900.1;Parent=LTnewLM_340016900 LTnewLM_34 AUGUSTUS CDS 468480 469637 1 + 0 ID=LTnewLM_340016900.1:CDS:1;Parent=LTnewLM_340016900.1 ### LTnewLM_34 . polypeptide 468480 469637 . + . ID=LTnewLM_340016900.1:pep;Derives_from=LTnewLM_340016900.1;orthologous_to=LmjF.34.1030_mRNA;ortholog_cluster=OG0005398;product=term%3DEF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499|Pfam:PF13833|Pfam:PF13202;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 469422 469607 . + . Parent=LTnewLM_340016900.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_34 Pfam protein_match 469482 469607 . + . Parent=LTnewLM_340016900.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_34 Pfam protein_match 469557 469607 . + . Parent=LTnewLM_340016900.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_34 AUGUSTUS gene 471056 471784 1 + . ID=LTnewLM_340017000 LTnewLM_34 AUGUSTUS mRNA 471056 471784 1 + . ID=LTnewLM_340017000.1;Parent=LTnewLM_340017000 LTnewLM_34 AUGUSTUS CDS 471056 471784 1 + 0 ID=LTnewLM_340017000.1:CDS:1;Parent=LTnewLM_340017000.1 ### LTnewLM_34 . polypeptide 471056 471784 . + . ID=LTnewLM_340017000.1:pep;Derives_from=LTnewLM_340017000.1;orthologous_to=LmjF.34.1040_mRNA;ortholog_cluster=OG0005399;product=term%3DUracil phosphoribosyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14681 LTnewLM_34 Pfam protein_match 471143 471769 . + . Parent=LTnewLM_340017000.1:pep;Name=PF14681;signature_desc=Uracil phosphoribosyltransferase ### LTnewLM_34 AUGUSTUS gene 474153 476255 1 + . ID=LTnewLM_340017100 LTnewLM_34 AUGUSTUS mRNA 474153 476255 1 + . ID=LTnewLM_340017100.1;Parent=LTnewLM_340017100 LTnewLM_34 AUGUSTUS CDS 474153 476255 1 + 0 ID=LTnewLM_340017100.1:CDS:1;Parent=LTnewLM_340017100.1 ### LTnewLM_34 . polypeptide 474153 476255 . + . ID=LTnewLM_340017100.1:pep;Derives_from=LTnewLM_340017100.1;orthologous_to=LmjF.34.1050_mRNA;ortholog_cluster=OG0005400;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 474849 475643 . + . Parent=LTnewLM_340017100.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 479924 482290 1 + . ID=LTnewLM_340017200 LTnewLM_34 AUGUSTUS mRNA 479924 482290 1 + . ID=LTnewLM_340017200.1;Parent=LTnewLM_340017200 LTnewLM_34 AUGUSTUS CDS 479924 482290 1 + 0 ID=LTnewLM_340017200.1:CDS:1;Parent=LTnewLM_340017200.1 ### LTnewLM_34 . polypeptide 479924 482290 . + . ID=LTnewLM_340017200.1:pep;Derives_from=LTnewLM_340017200.1;orthologous_to=LmjF.34.1060_mRNA;ortholog_cluster=OG0005401;product=term%3DATPase family associated with various cellular activities (AAA)/AAA+ lid domain/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004|Pfam:PF17862|Pfam:PF01434;Ontology_term=GO:0004222,GO:0006508,GO:0005524 LTnewLM_34 Pfam protein_match 481043 481429 . + . Parent=LTnewLM_340017200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 481529 481636 . + . Parent=LTnewLM_340017200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_34 Pfam protein_match 481694 482224 . + . Parent=LTnewLM_340017200.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 ### LTnewLM_34 Aragorn_1.2.36 gene 482652 482726 . - . ID=LTnewLM_340017300 LTnewLM_34 Aragorn_1.2.36 tRNA 482652 482726 . - . ID=LTnewLM_340017300:tRNA;Parent=LTnewLM_340017300;aa=Val;anticodon=aac;gc_content=58.7 ### LTnewLM_34 Aragorn_1.2.36 gene 482966 483040 . + . ID=LTnewLM_340017400 LTnewLM_34 Aragorn_1.2.36 tRNA 482966 483040 . + . ID=LTnewLM_340017400:tRNA;Parent=LTnewLM_340017400;aa=Ile;anticodon=aat;gc_content=56.0 ### LTnewLM_34 Aragorn_1.2.36 gene 483095 483167 . + . ID=LTnewLM_340017500 LTnewLM_34 Aragorn_1.2.36 tRNA 483095 483167 . + . ID=LTnewLM_340017500:tRNA;Parent=LTnewLM_340017500;aa=Met;anticodon=cat;gc_content=63.0 ### LTnewLM_34 Aragorn_1.2.36 gene 483198 483279 . - . ID=LTnewLM_340017600 LTnewLM_34 Aragorn_1.2.36 tRNA 483198 483279 . - . ID=LTnewLM_340017600:tRNA;Parent=LTnewLM_340017600;aa=Leu;anticodon=tag;gc_content=63.4 ### LTnewLM_34 Aragorn_1.2.36 gene 483354 483434 . + . ID=LTnewLM_340017700 LTnewLM_34 Aragorn_1.2.36 tRNA 483354 483434 . + . ID=LTnewLM_340017700:tRNA;Parent=LTnewLM_340017700;aa=Ser;anticodon=tga;gc_content=51.9 ### LTnewLM_34 . gene 484379 487456 . - . ID=LTnewLM_340017800;has_internal_stop=false;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.34.1070:mRNA 1 1026;original_prot_length=1026 LTnewLM_34 . mRNA 484379 487456 . - . ID=LTnewLM_340017800.1;Parent=LTnewLM_340017800 LTnewLM_34 . CDS 484379 487456 . - 0 ID=LTnewLM_340017800.1:CDS:1;Parent=LTnewLM_340017800.1 ### LTnewLM_34 . polypeptide 484379 487456 . - . ID=LTnewLM_340017800.1:pep;Derives_from=LTnewLM_340017800.1;orthologous_to=LmjF.34.1070_mRNA;ortholog_cluster=OG0005402;product=term%3DLipase (class 3)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01764;Ontology_term=GO:0006629 LTnewLM_34 Pfam protein_match 484529 484720 . - . Parent=LTnewLM_340017800.1:pep;Name=PF01764;signature_desc=Lipase (class 3);Ontology_term=GO:0006629 ### LTnewLM_34 AUGUSTUS gene 489359 489688 0.92 - . ID=LTnewLM_340017900 LTnewLM_34 AUGUSTUS mRNA 489359 489688 0.92 - . ID=LTnewLM_340017900.1;Parent=LTnewLM_340017900 LTnewLM_34 AUGUSTUS CDS 489359 489688 0.92 - 0 ID=LTnewLM_340017900.1:CDS:1;Parent=LTnewLM_340017900.1 ### LTnewLM_34 . polypeptide 489359 489688 . - . ID=LTnewLM_340017900.1:pep;Derives_from=LTnewLM_340017900.1;orthologous_to=LTnewLM_340018500.1;ortholog_cluster=OG0005403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 495936 497339 . - . ID=LTnewLM_340018000;coverage=0.904;sequence_ID=0.798;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.0960_0 LTnewLM_34 Liftoff mRNA 495936 497339 . - . ID=LTnewLM_340018000.1;Parent=LTnewLM_340018000;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 495936 497339 . - 0 ID=LTnewLM_340018000.1:CDS:1;Parent=LTnewLM_340018000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 495936 497339 . - . ID=LTnewLM_340018000.1:pep;Derives_from=LTnewLM_340018000.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 495939 496397 . - . Parent=LTnewLM_340018000.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 497610 499370 0.41 - . ID=LTnewLM_340018100 LTnewLM_34 AUGUSTUS mRNA 497610 499370 0.41 - . ID=LTnewLM_340018100.1;Parent=LTnewLM_340018100 LTnewLM_34 AUGUSTUS CDS 497610 497898 0.88 - 1 ID=LTnewLM_340018100.1:CDS:1;Parent=LTnewLM_340018100.1 LTnewLM_34 AUGUSTUS CDS 499027 499370 0.41 - 0 ID=LTnewLM_340018100.1:CDS:2;Parent=LTnewLM_340018100.1 ### LTnewLM_34 . polypeptide 497610 499370 . - . ID=LTnewLM_340018100.1:pep;Derives_from=LTnewLM_340018100.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018300.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 500965 501605 0.84 - . ID=LTnewLM_340018200 LTnewLM_34 AUGUSTUS mRNA 500965 501605 0.84 - . ID=LTnewLM_340018200.1;Parent=LTnewLM_340018200 LTnewLM_34 AUGUSTUS CDS 500965 501051 0.87 - 0 ID=LTnewLM_340018200.1:CDS:1;Parent=LTnewLM_340018200.1 LTnewLM_34 AUGUSTUS CDS 501465 501605 0.97 - 0 ID=LTnewLM_340018200.1:CDS:2;Parent=LTnewLM_340018200.1 ### LTnewLM_34 . polypeptide 500965 501605 . - . ID=LTnewLM_340018200.1:pep;Derives_from=LTnewLM_340018200.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 504131 504559 0.83 - . ID=LTnewLM_340018300 LTnewLM_34 AUGUSTUS mRNA 504131 504559 0.83 - . ID=LTnewLM_340018300.1;Parent=LTnewLM_340018300 LTnewLM_34 AUGUSTUS CDS 504131 504559 0.83 - 0 ID=LTnewLM_340018300.1:CDS:1;Parent=LTnewLM_340018300.1 ### LTnewLM_34 . polypeptide 504131 504559 . - . ID=LTnewLM_340018300.1:pep;Derives_from=LTnewLM_340018300.1;orthologous_to=LTnewLM_180016900.1,LTnewLM_180016900.2,LTnewLM_180019800.1,LTnewLM_200011500.1,LTnewLM_200013000.1,LTnewLM_210006800.1,LTnewLM_260031800.1,LTnewLM_310009900.1,LTnewLM_340018100.1;ortholog_cluster=OG0000016;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 506201 506899 1 - . ID=LTnewLM_340018400 LTnewLM_34 AUGUSTUS mRNA 506201 506899 1 - . ID=LTnewLM_340018400.1;Parent=LTnewLM_340018400 LTnewLM_34 AUGUSTUS CDS 506201 506899 1 - 0 ID=LTnewLM_340018400.1:CDS:1;Parent=LTnewLM_340018400.1 ### LTnewLM_34 . polypeptide 506201 506899 . - . ID=LTnewLM_340018400.1:pep;Derives_from=LTnewLM_340018400.1;orthologous_to=LTnewLM_000005500.1,LTnewLM_310010000.1,LTnewLM_310010100.1,LTnewLM_310010300.1,LTnewLM_310010400.1,LTnewLM_310010500.1,LmjF.31.0450_mRNA;ortholog_cluster=OG0000032;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 506396 506857 . - . Parent=LTnewLM_340018400.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 508159 508362 1 - . ID=LTnewLM_340018500 LTnewLM_34 AUGUSTUS mRNA 508159 508362 1 - . ID=LTnewLM_340018500.1;Parent=LTnewLM_340018500 LTnewLM_34 AUGUSTUS CDS 508159 508362 1 - 0 ID=LTnewLM_340018500.1:CDS:1;Parent=LTnewLM_340018500.1 ### LTnewLM_34 . polypeptide 508159 508362 . - . ID=LTnewLM_340018500.1:pep;Derives_from=LTnewLM_340018500.1;orthologous_to=LTnewLM_340017900.1;ortholog_cluster=OG0005403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 508695 509479 0.7 - . ID=LTnewLM_340018600 LTnewLM_34 AUGUSTUS mRNA 508695 509479 0.7 - . ID=LTnewLM_340018600.1;Parent=LTnewLM_340018600 LTnewLM_34 AUGUSTUS CDS 508695 508833 0.7 - 1 ID=LTnewLM_340018600.1:CDS:1;Parent=LTnewLM_340018600.1 LTnewLM_34 AUGUSTUS CDS 509349 509479 0.96 - 0 ID=LTnewLM_340018600.1:CDS:2;Parent=LTnewLM_340018600.1 ### LTnewLM_34 . polypeptide 508695 509479 . - . ID=LTnewLM_340018600.1:pep;Derives_from=LTnewLM_340018600.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 511832 516127 1 - . ID=LTnewLM_340018700 LTnewLM_34 AUGUSTUS mRNA 511832 516127 1 - . ID=LTnewLM_340018700.1;Parent=LTnewLM_340018700 LTnewLM_34 AUGUSTUS CDS 511832 516127 1 - 0 ID=LTnewLM_340018700.1:CDS:1;Parent=LTnewLM_340018700.1 ### LTnewLM_34 . polypeptide 511832 516127 . - . ID=LTnewLM_340018700.1:pep;Derives_from=LTnewLM_340018700.1;orthologous_to=LmjF.34.1090_mRNA;ortholog_cluster=OG0005404;product=term%3DAcyltransferase/Glycerol-3-phosphate acyltransferase C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553|Pfam:PF19277;Ontology_term=GO:0016746,GO:0008152 LTnewLM_34 Pfam protein_match 512069 513337 . - . Parent=LTnewLM_340018700.1:pep;Name=PF19277;signature_desc=Glycerol-3-phosphate acyltransferase C-terminal region LTnewLM_34 Pfam protein_match 513374 513760 . - . Parent=LTnewLM_340018700.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_34 AUGUSTUS gene 520203 521873 1 - . ID=LTnewLM_340018800 LTnewLM_34 AUGUSTUS mRNA 520203 521873 1 - . ID=LTnewLM_340018800.1;Parent=LTnewLM_340018800 LTnewLM_34 AUGUSTUS CDS 520203 521873 1 - 0 ID=LTnewLM_340018800.1:CDS:1;Parent=LTnewLM_340018800.1 ### LTnewLM_34 . polypeptide 520203 521873 . - . ID=LTnewLM_340018800.1:pep;Derives_from=LTnewLM_340018800.1;orthologous_to=LmjF.34.1100_mRNA;ortholog_cluster=OG0005405;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 523063 524670 1 - . ID=LTnewLM_340018900 LTnewLM_34 AUGUSTUS mRNA 523063 524670 1 - . ID=LTnewLM_340018900.1;Parent=LTnewLM_340018900 LTnewLM_34 AUGUSTUS CDS 523063 524670 1 - 0 ID=LTnewLM_340018900.1:CDS:1;Parent=LTnewLM_340018900.1 ### LTnewLM_34 . polypeptide 523063 524670 . - . ID=LTnewLM_340018900.1:pep;Derives_from=LTnewLM_340018900.1;orthologous_to=LmjF.34.1110_mRNA;ortholog_cluster=OG0005406;product=term%3DShwachman-Bodian-Diamond syndrome (SBDS) protein/SBDS protein%2C domain II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01172|Pfam:PF09377;Ontology_term=GO:0042254 LTnewLM_34 Pfam protein_match 524149 524337 . - . Parent=LTnewLM_340018900.1:pep;Name=PF09377;signature_desc=SBDS protein%2C domain II;Ontology_term=GO:0042254 LTnewLM_34 Pfam protein_match 524365 524625 . - . Parent=LTnewLM_340018900.1:pep;Name=PF01172;signature_desc=Shwachman-Bodian-Diamond syndrome (SBDS) protein ### LTnewLM_34 AUGUSTUS gene 526028 526825 1 - . ID=LTnewLM_340019000 LTnewLM_34 AUGUSTUS mRNA 526028 526825 1 - . ID=LTnewLM_340019000.1;Parent=LTnewLM_340019000 LTnewLM_34 AUGUSTUS CDS 526028 526825 1 - 0 ID=LTnewLM_340019000.1:CDS:1;Parent=LTnewLM_340019000.1 ### LTnewLM_34 . polypeptide 526028 526825 . - . ID=LTnewLM_340019000.1:pep;Derives_from=LTnewLM_340019000.1;orthologous_to=LmjF.34.1120_mRNA;ortholog_cluster=OG0005407;product=term%3DCH-like domain in sperm protein/CAMSAP CH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06294|Pfam:PF11971 LTnewLM_34 Pfam protein_match 526502 526786 . - . Parent=LTnewLM_340019000.1:pep;Name=PF06294;signature_desc=CH-like domain in sperm protein LTnewLM_34 Pfam protein_match 526541 526780 . - . Parent=LTnewLM_340019000.1:pep;Name=PF11971;signature_desc=CAMSAP CH domain ### LTnewLM_34 . polypeptide 527962 528743 . - . ID=LTnewLM_340019100.1:pep;Derives_from=LTnewLM_340019100.1;orthologous_to=LTnewLM_340019100.2,LmjF.34.1130_mRNA;ortholog_cluster=OG0000454;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 527962 535593 1.18 - . ID=LTnewLM_340019100 LTnewLM_34 AUGUSTUS mRNA 527962 528743 0.18 - . ID=LTnewLM_340019100.1;Parent=LTnewLM_340019100 LTnewLM_34 AUGUSTUS CDS 527962 528566 0.29 - 2 ID=LTnewLM_340019100.1:CDS:1;Parent=LTnewLM_340019100.1 LTnewLM_34 AUGUSTUS CDS 528701 528743 0.23 - 0 ID=LTnewLM_340019100.1:CDS:2;Parent=LTnewLM_340019100.1 LTnewLM_34 AUGUSTUS mRNA 527962 535593 1 - . ID=LTnewLM_340019100.2;Parent=LTnewLM_340019100 LTnewLM_34 AUGUSTUS CDS 527962 535593 1 - 0 ID=LTnewLM_340019100.2:CDS:1;Parent=LTnewLM_340019100.2 ### LTnewLM_34 . polypeptide 527962 535593 . - . ID=LTnewLM_340019100.2:pep;Derives_from=LTnewLM_340019100.2;orthologous_to=LTnewLM_340019100.1,LmjF.34.1130_mRNA;ortholog_cluster=OG0000454;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 536385 537866 1 - . ID=LTnewLM_340019200 LTnewLM_34 AUGUSTUS mRNA 536385 537866 1 - . ID=LTnewLM_340019200.1;Parent=LTnewLM_340019200 LTnewLM_34 AUGUSTUS CDS 536385 537866 1 - 0 ID=LTnewLM_340019200.1:CDS:1;Parent=LTnewLM_340019200.1 ### LTnewLM_34 . polypeptide 536385 537866 . - . ID=LTnewLM_340019200.1:pep;Derives_from=LTnewLM_340019200.1;orthologous_to=LmjF.34.1140_mRNA;ortholog_cluster=OG0005408;product=term%3DDihydrouridine synthase (Dus)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01207;Ontology_term=GO:0008033,GO:0055114,GO:0050660,GO:0017150 LTnewLM_34 Pfam protein_match 536838 537569 . - . Parent=LTnewLM_340019200.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 538587 540026 1 - . ID=LTnewLM_340019300 LTnewLM_34 AUGUSTUS mRNA 538587 540026 1 - . ID=LTnewLM_340019300.1;Parent=LTnewLM_340019300 LTnewLM_34 AUGUSTUS CDS 538587 540026 1 - 0 ID=LTnewLM_340019300.1:CDS:1;Parent=LTnewLM_340019300.1 ### LTnewLM_34 . polypeptide 538587 540026 . - . ID=LTnewLM_340019300.1:pep;Derives_from=LTnewLM_340019300.1;orthologous_to=LmjF.34.1150_mRNA;ortholog_cluster=OG0005409;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 541257 541871 1 - . ID=LTnewLM_340019400 LTnewLM_34 AUGUSTUS mRNA 541257 541871 1 - . ID=LTnewLM_340019400.1;Parent=LTnewLM_340019400 LTnewLM_34 AUGUSTUS CDS 541257 541871 1 - 0 ID=LTnewLM_340019400.1:CDS:1;Parent=LTnewLM_340019400.1 ### LTnewLM_34 . polypeptide 541257 541871 . - . ID=LTnewLM_340019400.1:pep;Derives_from=LTnewLM_340019400.1;orthologous_to=LmjF.34.1155_mRNA;ortholog_cluster=OG0005410;product=term%3DUncharacterised ACR%2C YggU family COG1872%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02594 LTnewLM_34 Pfam protein_match 541653 541802 . - . Parent=LTnewLM_340019400.1:pep;Name=PF02594;signature_desc=Uncharacterised ACR%2C YggU family COG1872 ### LTnewLM_34 AUGUSTUS gene 543209 544561 1 - . ID=LTnewLM_340019500 LTnewLM_34 AUGUSTUS mRNA 543209 544561 1 - . ID=LTnewLM_340019500.1;Parent=LTnewLM_340019500 LTnewLM_34 AUGUSTUS CDS 543209 544561 1 - 0 ID=LTnewLM_340019500.1:CDS:1;Parent=LTnewLM_340019500.1 ### LTnewLM_34 . polypeptide 543209 544561 . - . ID=LTnewLM_340019500.1:pep;Derives_from=LTnewLM_340019500.1;orthologous_to=LmjF.34.1160_mRNA;ortholog_cluster=OG0005411;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 546711 547250 1 - . ID=LTnewLM_340019600 LTnewLM_34 AUGUSTUS mRNA 546711 547250 1 - . ID=LTnewLM_340019600.1;Parent=LTnewLM_340019600 LTnewLM_34 AUGUSTUS CDS 546711 547250 1 - 0 ID=LTnewLM_340019600.1:CDS:1;Parent=LTnewLM_340019600.1 ### LTnewLM_34 . polypeptide 546711 547250 . - . ID=LTnewLM_340019600.1:pep;Derives_from=LTnewLM_340019600.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 549959 551956 1 - . ID=LTnewLM_340019700 LTnewLM_34 AUGUSTUS mRNA 549959 551956 1 - . ID=LTnewLM_340019700.1;Parent=LTnewLM_340019700 LTnewLM_34 AUGUSTUS CDS 549959 551956 1 - 0 ID=LTnewLM_340019700.1:CDS:1;Parent=LTnewLM_340019700.1 ### LTnewLM_34 . polypeptide 549959 551956 . - . ID=LTnewLM_340019700.1:pep;Derives_from=LTnewLM_340019700.1;orthologous_to=LmjF.34.1170_mRNA;ortholog_cluster=OG0005412;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 554537 555367 1 - . ID=LTnewLM_340019800 LTnewLM_34 AUGUSTUS mRNA 554537 555367 1 - . ID=LTnewLM_340019800.1;Parent=LTnewLM_340019800 LTnewLM_34 AUGUSTUS CDS 554537 555367 1 - 0 ID=LTnewLM_340019800.1:CDS:1;Parent=LTnewLM_340019800.1 ### LTnewLM_34 . polypeptide 554537 555367 . - . ID=LTnewLM_340019800.1:pep;Derives_from=LTnewLM_340019800.1;orthologous_to=LmjF.34.1175_mRNA;ortholog_cluster=OG0005413;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 555826 557793 1 - . ID=LTnewLM_340019900 LTnewLM_34 AUGUSTUS mRNA 555826 557793 1 - . ID=LTnewLM_340019900.1;Parent=LTnewLM_340019900 LTnewLM_34 AUGUSTUS CDS 555826 557793 1 - 0 ID=LTnewLM_340019900.1:CDS:1;Parent=LTnewLM_340019900.1 ### LTnewLM_34 . polypeptide 555826 557793 . - . ID=LTnewLM_340019900.1:pep;Derives_from=LTnewLM_340019900.1;orthologous_to=LmjF.34.1180_mRNA;ortholog_cluster=OG0005414;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 558652 564126 1 - . ID=LTnewLM_340020000 LTnewLM_34 AUGUSTUS mRNA 558652 564126 1 - . ID=LTnewLM_340020000.1;Parent=LTnewLM_340020000 LTnewLM_34 AUGUSTUS CDS 558652 564126 1 - 0 ID=LTnewLM_340020000.1:CDS:1;Parent=LTnewLM_340020000.1 ### LTnewLM_34 . polypeptide 558652 564126 . - . ID=LTnewLM_340020000.1:pep;Derives_from=LTnewLM_340020000.1;orthologous_to=LmjF.34.1190_mRNA;ortholog_cluster=OG0005415;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_34 Pfam protein_match 560068 560241 . - . Parent=LTnewLM_340020000.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_34 Pfam protein_match 560434 560973 . - . Parent=LTnewLM_340020000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_34 Pfam protein_match 561286 561753 . - . Parent=LTnewLM_340020000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_34 AUGUSTUS gene 565166 565912 1 - . ID=LTnewLM_340020100 LTnewLM_34 AUGUSTUS mRNA 565166 565912 1 - . ID=LTnewLM_340020100.1;Parent=LTnewLM_340020100 LTnewLM_34 AUGUSTUS CDS 565166 565912 1 - 0 ID=LTnewLM_340020100.1:CDS:1;Parent=LTnewLM_340020100.1 ### LTnewLM_34 . polypeptide 565166 565912 . - . ID=LTnewLM_340020100.1:pep;Derives_from=LTnewLM_340020100.1;orthologous_to=LmjF.34.1200_mRNA;ortholog_cluster=OG0005416;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 566762 568465 1 - . ID=LTnewLM_340020200 LTnewLM_34 AUGUSTUS mRNA 566762 568465 1 - . ID=LTnewLM_340020200.1;Parent=LTnewLM_340020200 LTnewLM_34 AUGUSTUS CDS 566762 568465 1 - 0 ID=LTnewLM_340020200.1:CDS:1;Parent=LTnewLM_340020200.1 ### LTnewLM_34 . polypeptide 566762 568465 . - . ID=LTnewLM_340020200.1:pep;Derives_from=LTnewLM_340020200.1;orthologous_to=LmjF.34.1210_mRNA;ortholog_cluster=OG0005417;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 570738 573032 1 - . ID=LTnewLM_340020300 LTnewLM_34 AUGUSTUS mRNA 570738 573032 1 - . ID=LTnewLM_340020300.1;Parent=LTnewLM_340020300 LTnewLM_34 AUGUSTUS CDS 570738 573032 1 - 0 ID=LTnewLM_340020300.1:CDS:1;Parent=LTnewLM_340020300.1 ### LTnewLM_34 . polypeptide 570738 573032 . - . ID=LTnewLM_340020300.1:pep;Derives_from=LTnewLM_340020300.1;orthologous_to=LmjF.34.1220_mRNA;ortholog_cluster=OG0005418;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 576238 580998 1 - . ID=LTnewLM_340020400 LTnewLM_34 AUGUSTUS mRNA 576238 580998 1 - . ID=LTnewLM_340020400.1;Parent=LTnewLM_340020400 LTnewLM_34 AUGUSTUS CDS 576238 580998 1 - 0 ID=LTnewLM_340020400.1:CDS:1;Parent=LTnewLM_340020400.1 ### LTnewLM_34 . polypeptide 576238 580998 . - . ID=LTnewLM_340020400.1:pep;Derives_from=LTnewLM_340020400.1;orthologous_to=LmjF.34.1230_mRNA;ortholog_cluster=OG0005419;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 581350 583098 1 - . ID=LTnewLM_340020500 LTnewLM_34 AUGUSTUS mRNA 581350 583098 1 - . ID=LTnewLM_340020500.1;Parent=LTnewLM_340020500 LTnewLM_34 AUGUSTUS CDS 581350 583098 1 - 0 ID=LTnewLM_340020500.1:CDS:1;Parent=LTnewLM_340020500.1 ### LTnewLM_34 . polypeptide 581350 583098 . - . ID=LTnewLM_340020500.1:pep;Derives_from=LTnewLM_340020500.1;orthologous_to=LmjF.34.1240_mRNA;ortholog_cluster=OG0005420;product=term%3D3'-5' exonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01612;Ontology_term=GO:0006139,GO:0003676,GO:0008408 LTnewLM_34 Pfam protein_match 582544 582957 . - . Parent=LTnewLM_340020500.1:pep;Name=PF01612;signature_desc=3'-5' exonuclease;Ontology_term=GO:0003676,GO:0008408,GO:0006139 ### LTnewLM_34 AUGUSTUS gene 584435 584713 1 - . ID=LTnewLM_340020600 LTnewLM_34 AUGUSTUS mRNA 584435 584713 1 - . ID=LTnewLM_340020600.1;Parent=LTnewLM_340020600 LTnewLM_34 AUGUSTUS CDS 584435 584713 1 - 0 ID=LTnewLM_340020600.1:CDS:1;Parent=LTnewLM_340020600.1 ### LTnewLM_34 . polypeptide 584435 584713 . - . ID=LTnewLM_340020600.1:pep;Derives_from=LTnewLM_340020600.1;orthologous_to=LmjF.34.1245_mRNA;ortholog_cluster=OG0005421;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 585191 586267 1 - . ID=LTnewLM_340020700 LTnewLM_34 AUGUSTUS mRNA 585191 586267 1 - . ID=LTnewLM_340020700.1;Parent=LTnewLM_340020700 LTnewLM_34 AUGUSTUS CDS 585191 586267 1 - 0 ID=LTnewLM_340020700.1:CDS:1;Parent=LTnewLM_340020700.1 ### LTnewLM_34 . polypeptide 585191 586267 . - . ID=LTnewLM_340020700.1:pep;Derives_from=LTnewLM_340020700.1;orthologous_to=LmjF.34.1250_mRNA;ortholog_cluster=OG0005422;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 585581 586117 . - . Parent=LTnewLM_340020700.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 587007 590768 1 - . ID=LTnewLM_340020800 LTnewLM_34 AUGUSTUS mRNA 587007 590768 1 - . ID=LTnewLM_340020800.1;Parent=LTnewLM_340020800 LTnewLM_34 AUGUSTUS CDS 587007 590768 1 - 0 ID=LTnewLM_340020800.1:CDS:1;Parent=LTnewLM_340020800.1 ### LTnewLM_34 . polypeptide 587007 590768 . - . ID=LTnewLM_340020800.1:pep;Derives_from=LTnewLM_340020800.1;orthologous_to=LmjF.34.1260_mRNA;ortholog_cluster=OG0005423;product=term%3DDNA polymerase family A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00476;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_34 Pfam protein_match 587058 587912 . - . Parent=LTnewLM_340020800.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 LTnewLM_34 Pfam protein_match 588240 588572 . - . Parent=LTnewLM_340020800.1:pep;Name=PF00476;signature_desc=DNA polymerase family A;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_34 AUGUSTUS gene 592621 598215 1 - . ID=LTnewLM_340020900 LTnewLM_34 AUGUSTUS mRNA 592621 598215 1 - . ID=LTnewLM_340020900.1;Parent=LTnewLM_340020900 LTnewLM_34 AUGUSTUS CDS 592621 598215 1 - 0 ID=LTnewLM_340020900.1:CDS:1;Parent=LTnewLM_340020900.1 ### LTnewLM_34 . polypeptide 592621 598215 . - . ID=LTnewLM_340020900.1:pep;Derives_from=LTnewLM_340020900.1;orthologous_to=LmjF.34.1270_mRNA;ortholog_cluster=OG0005424;product=term%3DPiezo non-specific cation channel%2C R-Ras-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12166;Ontology_term=GO:0016021,GO:0008381 LTnewLM_34 Pfam protein_match 592720 594069 . - . Parent=LTnewLM_340020900.1:pep;Name=PF12166;signature_desc=Piezo non-specific cation channel%2C R-Ras-binding domain;Ontology_term=GO:0008381,GO:0016021 ### LTnewLM_34 AUGUSTUS gene 598690 599730 1 - . ID=LTnewLM_340021000 LTnewLM_34 AUGUSTUS mRNA 598690 599730 1 - . ID=LTnewLM_340021000.1;Parent=LTnewLM_340021000 LTnewLM_34 AUGUSTUS CDS 598690 599730 1 - 0 ID=LTnewLM_340021000.1:CDS:1;Parent=LTnewLM_340021000.1 ### LTnewLM_34 . polypeptide 598690 599730 . - . ID=LTnewLM_340021000.1:pep;Derives_from=LTnewLM_340021000.1;orthologous_to=LmjF.34.1280_mRNA;ortholog_cluster=OG0005425;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 601114 603438 . - . ID=LTnewLM_340021100;coverage=1.0;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.1290_0 LTnewLM_34 Liftoff mRNA 601114 603438 . - . ID=LTnewLM_340021100.1;Parent=LTnewLM_340021100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 601114 603438 . - 0 ID=LTnewLM_340021100.1:CDS:1;Parent=LTnewLM_340021100.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 601114 603438 . - . ID=LTnewLM_340021100.1:pep;Derives_from=LTnewLM_340021100.1;orthologous_to=LmjF.34.1290_mRNA;ortholog_cluster=OG0005426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 604953 606032 1 - . ID=LTnewLM_340021200 LTnewLM_34 AUGUSTUS mRNA 604953 606032 1 - . ID=LTnewLM_340021200.1;Parent=LTnewLM_340021200 LTnewLM_34 AUGUSTUS CDS 604953 606032 1 - 0 ID=LTnewLM_340021200.1:CDS:1;Parent=LTnewLM_340021200.1 ### LTnewLM_34 . polypeptide 604953 606032 . - . ID=LTnewLM_340021200.1:pep;Derives_from=LTnewLM_340021200.1;orthologous_to=LmjF.34.1300_mRNA;ortholog_cluster=OG0005427;product=term%3DOsmC-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02566;Ontology_term=GO:0006979 LTnewLM_34 Pfam protein_match 605448 605672 . - . Parent=LTnewLM_340021200.1:pep;Name=PF02566;signature_desc=OsmC-like protein;Ontology_term=GO:0006979 ### LTnewLM_34 AUGUSTUS gene 608220 611084 1 - . ID=LTnewLM_340021300 LTnewLM_34 AUGUSTUS mRNA 608220 611084 1 - . ID=LTnewLM_340021300.1;Parent=LTnewLM_340021300 LTnewLM_34 AUGUSTUS CDS 608220 611084 1 - 0 ID=LTnewLM_340021300.1:CDS:1;Parent=LTnewLM_340021300.1 ### LTnewLM_34 . polypeptide 608220 611084 . - . ID=LTnewLM_340021300.1:pep;Derives_from=LTnewLM_340021300.1;orthologous_to=LmjF.34.1310_mRNA;ortholog_cluster=OG0005428;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 613223 615577 1 - . ID=LTnewLM_340021400 LTnewLM_34 AUGUSTUS mRNA 613223 615577 1 - . ID=LTnewLM_340021400.1;Parent=LTnewLM_340021400 LTnewLM_34 AUGUSTUS CDS 613223 615577 1 - 0 ID=LTnewLM_340021400.1:CDS:1;Parent=LTnewLM_340021400.1 ### LTnewLM_34 . polypeptide 613223 615577 . - . ID=LTnewLM_340021400.1:pep;Derives_from=LTnewLM_340021400.1;orthologous_to=LmjF.34.1320_mRNA;ortholog_cluster=OG0005429;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 617867 619348 1 - . ID=LTnewLM_340021500 LTnewLM_34 AUGUSTUS mRNA 617867 619348 1 - . ID=LTnewLM_340021500.1;Parent=LTnewLM_340021500 LTnewLM_34 AUGUSTUS CDS 617867 619348 1 - 0 ID=LTnewLM_340021500.1:CDS:1;Parent=LTnewLM_340021500.1 ### LTnewLM_34 . polypeptide 617867 619348 . - . ID=LTnewLM_340021500.1:pep;Derives_from=LTnewLM_340021500.1;orthologous_to=LmjF.34.1330_mRNA;ortholog_cluster=OG0005430;product=term%3DBCS1 N terminal/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08740|Pfam:PF00004;Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 618164 618505 . - . Parent=LTnewLM_340021500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 618614 619120 . - . Parent=LTnewLM_340021500.1:pep;Name=PF08740;signature_desc=BCS1 N terminal ### LTnewLM_34 AUGUSTUS gene 619821 623786 1 - . ID=LTnewLM_340021600 LTnewLM_34 AUGUSTUS mRNA 619821 623786 1 - . ID=LTnewLM_340021600.1;Parent=LTnewLM_340021600 LTnewLM_34 AUGUSTUS CDS 619821 623786 1 - 0 ID=LTnewLM_340021600.1:CDS:1;Parent=LTnewLM_340021600.1 ### LTnewLM_34 . polypeptide 619821 623786 . - . ID=LTnewLM_340021600.1:pep;Derives_from=LTnewLM_340021600.1;orthologous_to=LmjF.34.1340_mRNA;ortholog_cluster=OG0005431;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 625167 626888 1 - . ID=LTnewLM_340021700 LTnewLM_34 AUGUSTUS mRNA 625167 626888 1 - . ID=LTnewLM_340021700.1;Parent=LTnewLM_340021700 LTnewLM_34 AUGUSTUS CDS 625167 626888 1 - 0 ID=LTnewLM_340021700.1:CDS:1;Parent=LTnewLM_340021700.1 ### LTnewLM_34 . polypeptide 625167 626888 . - . ID=LTnewLM_340021700.1:pep;Derives_from=LTnewLM_340021700.1;orthologous_to=LmjF.34.1350_mRNA;ortholog_cluster=OG0005432;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 627992 635827 . - . ID=LTnewLM_340021800.1:pep;Derives_from=LTnewLM_340021800.1;orthologous_to=LTnewLM_340021800.2,LmjF.34.1360_mRNA;ortholog_cluster=OG0000455;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 627992 636157 1.99 - . ID=LTnewLM_340021800 LTnewLM_34 AUGUSTUS mRNA 627992 635827 0.99 - . ID=LTnewLM_340021800.1;Parent=LTnewLM_340021800 LTnewLM_34 AUGUSTUS CDS 627992 635827 0.99 - 0 ID=LTnewLM_340021800.1:CDS:1;Parent=LTnewLM_340021800.1 LTnewLM_34 AUGUSTUS mRNA 627992 636157 1 - . ID=LTnewLM_340021800.2;Parent=LTnewLM_340021800 LTnewLM_34 AUGUSTUS CDS 627992 636157 1 - 0 ID=LTnewLM_340021800.2:CDS:1;Parent=LTnewLM_340021800.2 ### LTnewLM_34 . polypeptide 627992 636157 . - . ID=LTnewLM_340021800.2:pep;Derives_from=LTnewLM_340021800.2;orthologous_to=LTnewLM_340021800.1,LmjF.34.1360_mRNA;ortholog_cluster=OG0000455;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 637931 638911 1 - . ID=LTnewLM_340021900 LTnewLM_34 AUGUSTUS mRNA 637931 638911 1 - . ID=LTnewLM_340021900.1;Parent=LTnewLM_340021900 LTnewLM_34 AUGUSTUS CDS 637931 638911 1 - 0 ID=LTnewLM_340021900.1:CDS:1;Parent=LTnewLM_340021900.1 ### LTnewLM_34 . polypeptide 637931 638911 . - . ID=LTnewLM_340021900.1:pep;Derives_from=LTnewLM_340021900.1;orthologous_to=LmjF.34.1370_mRNA;ortholog_cluster=OG0005433;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 639998 643906 1 - . ID=LTnewLM_340022000 LTnewLM_34 AUGUSTUS mRNA 639998 643906 1 - . ID=LTnewLM_340022000.1;Parent=LTnewLM_340022000 LTnewLM_34 AUGUSTUS CDS 639998 643906 1 - 0 ID=LTnewLM_340022000.1:CDS:1;Parent=LTnewLM_340022000.1 ### LTnewLM_34 . polypeptide 639998 643906 . - . ID=LTnewLM_340022000.1:pep;Derives_from=LTnewLM_340022000.1;orthologous_to=LmjF.34.1380_mRNA;ortholog_cluster=OG0005434;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 647321 661711 1 - . ID=LTnewLM_340022100 LTnewLM_34 AUGUSTUS mRNA 647321 661711 1 - . ID=LTnewLM_340022100.1;Parent=LTnewLM_340022100 LTnewLM_34 AUGUSTUS CDS 647321 661711 1 - 0 ID=LTnewLM_340022100.1:CDS:1;Parent=LTnewLM_340022100.1 ### LTnewLM_34 . polypeptide 647321 661711 . - . ID=LTnewLM_340022100.1:pep;Derives_from=LTnewLM_340022100.1;orthologous_to=LmjF.34.1390_mRNA;ortholog_cluster=OG0005435;product=term%3DN-terminal region of Chorein or VPS13/Vacuolar sorting-associated protein 13%2C N-terminal/SHR-binding domain of vacuolar-sorting associated protein 13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12624|Pfam:PF16908|Pfam:PF06650 LTnewLM_34 Pfam protein_match 649721 650167 . - . Parent=LTnewLM_340022100.1:pep;Name=PF06650;signature_desc=SHR-binding domain of vacuolar-sorting associated protein 13 LTnewLM_34 Pfam protein_match 660452 661243 . - . Parent=LTnewLM_340022100.1:pep;Name=PF16908;signature_desc=Vacuolar sorting-associated protein 13%2C N-terminal LTnewLM_34 Pfam protein_match 661370 661708 . - . Parent=LTnewLM_340022100.1:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 ### LTnewLM_34 AUGUSTUS gene 664137 665117 1 - . ID=LTnewLM_340022200 LTnewLM_34 AUGUSTUS mRNA 664137 665117 1 - . ID=LTnewLM_340022200.1;Parent=LTnewLM_340022200 LTnewLM_34 AUGUSTUS CDS 664137 665117 1 - 0 ID=LTnewLM_340022200.1:CDS:1;Parent=LTnewLM_340022200.1 ### LTnewLM_34 . polypeptide 664137 665117 . - . ID=LTnewLM_340022200.1:pep;Derives_from=LTnewLM_340022200.1;orthologous_to=LTnewLM_000006600.1,LTnewLM_340022300.1,LTnewLM_340022400.1,LmjF.34.1400_mRNA,LmjF.34.1410_mRNA;ortholog_cluster=OG0000068;product=term%3DD-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain/Acetohydroxy acid isomeroreductase%2C NADPH-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02826|Pfam:PF07991;Ontology_term=GO:0055114,GO:0051287,GO:0004455,GO:0008652 LTnewLM_34 Pfam protein_match 664281 664736 . - . Parent=LTnewLM_340022200.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 LTnewLM_34 Pfam protein_match 664362 664670 . - . Parent=LTnewLM_340022200.1:pep;Name=PF07991;signature_desc=Acetohydroxy acid isomeroreductase%2C NADPH-binding domain;Ontology_term=GO:0004455,GO:0008652,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 666923 667930 1 - . ID=LTnewLM_340022300 LTnewLM_34 AUGUSTUS mRNA 666923 667930 1 - . ID=LTnewLM_340022300.1;Parent=LTnewLM_340022300 LTnewLM_34 AUGUSTUS CDS 666923 667930 1 - 0 ID=LTnewLM_340022300.1:CDS:1;Parent=LTnewLM_340022300.1 ### LTnewLM_34 . polypeptide 666923 667930 . - . ID=LTnewLM_340022300.1:pep;Derives_from=LTnewLM_340022300.1;orthologous_to=LTnewLM_000006600.1,LTnewLM_340022200.1,LTnewLM_340022400.1,LmjF.34.1400_mRNA,LmjF.34.1410_mRNA;ortholog_cluster=OG0000068;product=term%3DD-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain/Acetohydroxy acid isomeroreductase%2C NADPH-binding domain/NAD binding domain of 6-phosphogluconate dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02826|Pfam:PF07991|Pfam:PF03446;Ontology_term=GO:0004455,GO:0006098,GO:0051287,GO:0055114,GO:0004616,GO:0008652 LTnewLM_34 Pfam protein_match 667043 667534 . - . Parent=LTnewLM_340022300.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 LTnewLM_34 Pfam protein_match 667172 667468 . - . Parent=LTnewLM_340022300.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 LTnewLM_34 Pfam protein_match 667178 667483 . - . Parent=LTnewLM_340022300.1:pep;Name=PF07991;signature_desc=Acetohydroxy acid isomeroreductase%2C NADPH-binding domain;Ontology_term=GO:0004455,GO:0008652,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 668926 669933 1 - . ID=LTnewLM_340022400 LTnewLM_34 AUGUSTUS mRNA 668926 669933 1 - . ID=LTnewLM_340022400.1;Parent=LTnewLM_340022400 LTnewLM_34 AUGUSTUS CDS 668926 669933 1 - 0 ID=LTnewLM_340022400.1:CDS:1;Parent=LTnewLM_340022400.1 ### LTnewLM_34 . polypeptide 668926 669933 . - . ID=LTnewLM_340022400.1:pep;Derives_from=LTnewLM_340022400.1;orthologous_to=LTnewLM_000006600.1,LTnewLM_340022200.1,LTnewLM_340022300.1,LmjF.34.1400_mRNA,LmjF.34.1410_mRNA;ortholog_cluster=OG0000068;product=term%3DD-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02826;Ontology_term=GO:0051287,GO:0055114 LTnewLM_34 Pfam protein_match 669046 669534 . - . Parent=LTnewLM_340022400.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 671291 672124 1 - . ID=LTnewLM_340022500 LTnewLM_34 AUGUSTUS mRNA 671291 672124 1 - . ID=LTnewLM_340022500.1;Parent=LTnewLM_340022500 LTnewLM_34 AUGUSTUS CDS 671291 672124 1 - 0 ID=LTnewLM_340022500.1:CDS:1;Parent=LTnewLM_340022500.1 ### LTnewLM_34 . polypeptide 671291 672124 . - . ID=LTnewLM_340022500.1:pep;Derives_from=LTnewLM_340022500.1;orthologous_to=LmjF.34.1420_mRNA;ortholog_cluster=OG0005436;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 673096 674826 1 - . ID=LTnewLM_340022600 LTnewLM_34 AUGUSTUS mRNA 673096 674826 1 - . ID=LTnewLM_340022600.1;Parent=LTnewLM_340022600 LTnewLM_34 AUGUSTUS CDS 673096 674826 1 - 0 ID=LTnewLM_340022600.1:CDS:1;Parent=LTnewLM_340022600.1 ### LTnewLM_34 . polypeptide 673096 674826 . - . ID=LTnewLM_340022600.1:pep;Derives_from=LTnewLM_340022600.1;orthologous_to=LmjF.34.1430_mRNA;ortholog_cluster=OG0005437;product=term%3DC2 domain of PTEN tumour-suppressor protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10409 LTnewLM_34 Pfam protein_match 673132 673365 . - . Parent=LTnewLM_340022600.1:pep;Name=PF10409;signature_desc=C2 domain of PTEN tumour-suppressor protein ### LTnewLM_34 AUGUSTUS gene 678273 681260 1 - . ID=LTnewLM_340022700 LTnewLM_34 AUGUSTUS mRNA 678273 681260 1 - . ID=LTnewLM_340022700.1;Parent=LTnewLM_340022700 LTnewLM_34 AUGUSTUS CDS 678273 681260 1 - 0 ID=LTnewLM_340022700.1:CDS:1;Parent=LTnewLM_340022700.1 ### LTnewLM_34 . polypeptide 678273 681260 . - . ID=LTnewLM_340022700.1:pep;Derives_from=LTnewLM_340022700.1;orthologous_to=LmjF.34.1440_mRNA;ortholog_cluster=OG0005438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 684281 686314 1 - . ID=LTnewLM_340022800 LTnewLM_34 AUGUSTUS mRNA 684281 686314 1 - . ID=LTnewLM_340022800.1;Parent=LTnewLM_340022800 LTnewLM_34 AUGUSTUS CDS 684281 686314 1 - 0 ID=LTnewLM_340022800.1:CDS:1;Parent=LTnewLM_340022800.1 ### LTnewLM_34 . polypeptide 684281 686314 . - . ID=LTnewLM_340022800.1:pep;Derives_from=LTnewLM_340022800.1;orthologous_to=LmjF.34.1450_mRNA;ortholog_cluster=OG0005439;product=term%3DR3H-associated N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13902 LTnewLM_34 Pfam protein_match 685130 685510 . - . Parent=LTnewLM_340022800.1:pep;Name=PF13902;signature_desc=R3H-associated N-terminal domain ### LTnewLM_34 Liftoff gene 687452 689686 . - . ID=LTnewLM_340022900;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.1460_0 LTnewLM_34 Liftoff mRNA 687452 689686 . - . ID=LTnewLM_340022900.1;Parent=LTnewLM_340022900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 687452 689686 . - 0 ID=LTnewLM_340022900.1:CDS:1;Parent=LTnewLM_340022900.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 687452 689686 . - . ID=LTnewLM_340022900.1:pep;Derives_from=LTnewLM_340022900.1;orthologous_to=LmjF.34.1460_mRNA;ortholog_cluster=OG0005440;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 690402 691586 1 - . ID=LTnewLM_340023000 LTnewLM_34 AUGUSTUS mRNA 690402 691586 1 - . ID=LTnewLM_340023000.1;Parent=LTnewLM_340023000 LTnewLM_34 AUGUSTUS CDS 690402 691586 1 - 0 ID=LTnewLM_340023000.1:CDS:1;Parent=LTnewLM_340023000.1 ### LTnewLM_34 . polypeptide 690402 691586 . - . ID=LTnewLM_340023000.1:pep;Derives_from=LTnewLM_340023000.1;orthologous_to=LmjF.34.1470_mRNA;ortholog_cluster=OG0005441;product=term%3DEAP30/Vps36 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04157 LTnewLM_34 Pfam protein_match 690597 691574 . - . Parent=LTnewLM_340023000.1:pep;Name=PF04157;signature_desc=EAP30/Vps36 family ### LTnewLM_34 AUGUSTUS gene 692422 695427 1 - . ID=LTnewLM_340023100 LTnewLM_34 AUGUSTUS mRNA 692422 695427 1 - . ID=LTnewLM_340023100.1;Parent=LTnewLM_340023100 LTnewLM_34 AUGUSTUS CDS 692422 695427 1 - 0 ID=LTnewLM_340023100.1:CDS:1;Parent=LTnewLM_340023100.1 ### LTnewLM_34 . polypeptide 692422 695427 . - . ID=LTnewLM_340023100.1:pep;Derives_from=LTnewLM_340023100.1;orthologous_to=LmjF.34.1480_mRNA;ortholog_cluster=OG0005442;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 697498 698556 1 - . ID=LTnewLM_340023200 LTnewLM_34 AUGUSTUS mRNA 697498 698556 1 - . ID=LTnewLM_340023200.1;Parent=LTnewLM_340023200 LTnewLM_34 AUGUSTUS CDS 697498 698556 1 - 0 ID=LTnewLM_340023200.1:CDS:1;Parent=LTnewLM_340023200.1 ### LTnewLM_34 . polypeptide 697498 698556 . - . ID=LTnewLM_340023200.1:pep;Derives_from=LTnewLM_340023200.1;orthologous_to=LmjF.34.1490_mRNA;ortholog_cluster=OG0005443;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 700124 700603 1 - . ID=LTnewLM_340023300 LTnewLM_34 AUGUSTUS mRNA 700124 700603 1 - . ID=LTnewLM_340023300.1;Parent=LTnewLM_340023300 LTnewLM_34 AUGUSTUS CDS 700124 700603 1 - 0 ID=LTnewLM_340023300.1:CDS:1;Parent=LTnewLM_340023300.1 ### LTnewLM_34 . polypeptide 700124 700603 . - . ID=LTnewLM_340023300.1:pep;Derives_from=LTnewLM_340023300.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 704295 706706 1 - . ID=LTnewLM_340023400 LTnewLM_34 AUGUSTUS mRNA 704295 706706 1 - . ID=LTnewLM_340023400.1;Parent=LTnewLM_340023400 LTnewLM_34 AUGUSTUS CDS 704295 706706 1 - 0 ID=LTnewLM_340023400.1:CDS:1;Parent=LTnewLM_340023400.1 ### LTnewLM_34 . polypeptide 704295 706706 . - . ID=LTnewLM_340023400.1:pep;Derives_from=LTnewLM_340023400.1;orthologous_to=LmjF.34.1500_mRNA;ortholog_cluster=OG0005444;product=term%3DIml2/Tetratricopeptide repeat protein 39%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10300 LTnewLM_34 Pfam protein_match 705057 706493 . - . Parent=LTnewLM_340023400.1:pep;Name=PF10300;signature_desc=Iml2/Tetratricopeptide repeat protein 39 ### LTnewLM_34 AUGUSTUS gene 709330 711027 1 - . ID=LTnewLM_340023500 LTnewLM_34 AUGUSTUS mRNA 709330 711027 1 - . ID=LTnewLM_340023500.1;Parent=LTnewLM_340023500 LTnewLM_34 AUGUSTUS CDS 709330 711027 1 - 0 ID=LTnewLM_340023500.1:CDS:1;Parent=LTnewLM_340023500.1 ### LTnewLM_34 . polypeptide 709330 711027 . - . ID=LTnewLM_340023500.1:pep;Derives_from=LTnewLM_340023500.1;orthologous_to=LmjF.34.1510_mRNA;ortholog_cluster=OG0005445;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 713344 713805 1 - . ID=LTnewLM_340023600 LTnewLM_34 AUGUSTUS mRNA 713344 713805 1 - . ID=LTnewLM_340023600.1;Parent=LTnewLM_340023600 LTnewLM_34 AUGUSTUS CDS 713344 713805 1 - 0 ID=LTnewLM_340023600.1:CDS:1;Parent=LTnewLM_340023600.1 ### LTnewLM_34 . polypeptide 713344 713805 . - . ID=LTnewLM_340023600.1:pep;Derives_from=LTnewLM_340023600.1;orthologous_to=LmjF.34.1520_mRNA;ortholog_cluster=OG0005446;product=term%3Dp25-alpha%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05517 LTnewLM_34 Pfam protein_match 713365 713790 . - . Parent=LTnewLM_340023600.1:pep;Name=PF05517;signature_desc=p25-alpha ### LTnewLM_34 . pseudogene 715276 715704 777 - . ID=LTnewLM_340023700:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.34.1520:mRNA 8 150;original_prot_length=154 LTnewLM_34 . pseudogenic_transcript 715276 715704 . - . ID=LTnewLM_340023700.1;Parent=LTnewLM_340023700:pseudogene LTnewLM_34 . pseudogenic_exon 715276 715704 . - . ID=LTnewLM_340023700.1:pseudogenic_exon:1;Parent=LTnewLM_340023700.1 ### LTnewLM_34 . polypeptide 715276 715704 . - . ID=LTnewLM_340023700.1:pep;Derives_from=LTnewLM_340023700.1;product=term%3Dp25-alpha%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05517 LTnewLM_34 Pfam protein_match 715285 715704 . - . Parent=LTnewLM_340023700.1:pep;Name=PF05517;signature_desc=p25-alpha ### LTnewLM_34 AUGUSTUS gene 716479 719685 1 - . ID=LTnewLM_340023800 LTnewLM_34 AUGUSTUS mRNA 716479 719685 1 - . ID=LTnewLM_340023800.1;Parent=LTnewLM_340023800 LTnewLM_34 AUGUSTUS CDS 716479 719685 1 - 0 ID=LTnewLM_340023800.1:CDS:1;Parent=LTnewLM_340023800.1 ### LTnewLM_34 . polypeptide 716479 719685 . - . ID=LTnewLM_340023800.1:pep;Derives_from=LTnewLM_340023800.1;orthologous_to=LmjF.34.1540_mRNA;ortholog_cluster=OG0005447;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_34 Pfam protein_match 718228 719475 . - . Parent=LTnewLM_340023800.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_34 Pfam protein_match 718960 719496 . - . Parent=LTnewLM_340023800.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_34 . polypeptide 720548 721084 . - . ID=LTnewLM_340023900.1:pep;Derives_from=LTnewLM_340023900.1;orthologous_to=LmjF.34.1550.1_mRNA;ortholog_cluster=OG0007644;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 720548 722914 . - . ID=LTnewLM_340023900.2:pep;Derives_from=LTnewLM_340023900.2;orthologous_to=LmjF.34.1550.2_mRNA;ortholog_cluster=OG0007645;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 720548 722944 . - . ID=LTnewLM_340023900:pseudogene;coverage=1.0;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.1550_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 720548 721376 . - . ID=LTnewLM_340023900.1;Parent=LTnewLM_340023900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 720548 721084 . - . ID=LTnewLM_340023900.1:pseudogenic_exon:1;Parent=LTnewLM_340023900.1;extra_copy_number=0 LTnewLM_34 . pseudogenic_transcript 720548 722944 . - . ID=LTnewLM_340023900.2;Parent=LTnewLM_340023900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 720548 722914 . - . ID=LTnewLM_340023900.2:pseudogenic_exon:1;Parent=LTnewLM_340023900.2;extra_copy_number=0 ### LTnewLM_34 AUGUSTUS gene 723948 724448 1 - . ID=LTnewLM_340024000 LTnewLM_34 AUGUSTUS mRNA 723948 724448 1 - . ID=LTnewLM_340024000.1;Parent=LTnewLM_340024000 LTnewLM_34 AUGUSTUS CDS 723948 724448 1 - 0 ID=LTnewLM_340024000.1:CDS:1;Parent=LTnewLM_340024000.1 ### LTnewLM_34 . polypeptide 723948 724448 . - . ID=LTnewLM_340024000.1:pep;Derives_from=LTnewLM_340024000.1;orthologous_to=LmjF.34.1555_mRNA;ortholog_cluster=OG0005448;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_34 Pfam protein_match 723978 724334 . - . Parent=LTnewLM_340024000.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_34 AUGUSTUS gene 726836 727492 0.92 - . ID=LTnewLM_340024100 LTnewLM_34 AUGUSTUS mRNA 726836 727492 0.19 - . ID=LTnewLM_340024100.1;Parent=LTnewLM_340024100 LTnewLM_34 AUGUSTUS CDS 726836 726864 0.42 - 2 ID=LTnewLM_340024100.1:CDS:1;Parent=LTnewLM_340024100.1 LTnewLM_34 AUGUSTUS CDS 726928 727492 0.19 - 0 ID=LTnewLM_340024100.1:CDS:2;Parent=LTnewLM_340024100.1 LTnewLM_34 AUGUSTUS mRNA 726890 727492 0.51 - . ID=LTnewLM_340024100.2;Parent=LTnewLM_340024100 LTnewLM_34 AUGUSTUS CDS 726890 727492 0.51 - 0 ID=LTnewLM_340024100.2:CDS:1;Parent=LTnewLM_340024100.2 LTnewLM_34 AUGUSTUS mRNA 727011 727492 0.22 - . ID=LTnewLM_340024100.3;Parent=LTnewLM_340024100 LTnewLM_34 AUGUSTUS CDS 727011 727020 0.22 - 1 ID=LTnewLM_340024100.3:CDS:1;Parent=LTnewLM_340024100.3 LTnewLM_34 AUGUSTUS CDS 727146 727492 0.32 - 0 ID=LTnewLM_340024100.3:CDS:2;Parent=LTnewLM_340024100.3 ### LTnewLM_34 . polypeptide 726836 727492 . - . ID=LTnewLM_340024100.1:pep;Derives_from=LTnewLM_340024100.1;orthologous_to=LTnewLM_310010700.1,LTnewLM_340024100.2,LTnewLM_340024100.3;ortholog_cluster=OG0000218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 726890 727492 . - . ID=LTnewLM_340024100.2:pep;Derives_from=LTnewLM_340024100.2;orthologous_to=LTnewLM_310010700.1,LTnewLM_340024100.1,LTnewLM_340024100.3;ortholog_cluster=OG0000218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 727011 727492 . - . ID=LTnewLM_340024100.3:pep;Derives_from=LTnewLM_340024100.3;orthologous_to=LTnewLM_310010700.1,LTnewLM_340024100.1,LTnewLM_340024100.2;ortholog_cluster=OG0000218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 727986 728318 1 - . ID=LTnewLM_340024200 LTnewLM_34 AUGUSTUS mRNA 727986 728318 1 - . ID=LTnewLM_340024200.1;Parent=LTnewLM_340024200 LTnewLM_34 AUGUSTUS CDS 727986 728318 1 - 0 ID=LTnewLM_340024200.1:CDS:1;Parent=LTnewLM_340024200.1 ### LTnewLM_34 . polypeptide 727986 728318 . - . ID=LTnewLM_340024200.1:pep;Derives_from=LTnewLM_340024200.1;orthologous_to=LTnewLM_000005400.1,LTnewLM_340024500.1;ortholog_cluster=OG0000456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 731247 732347 . - . ID=LTnewLM_340024300;coverage=0.902;sequence_ID=0.726;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1270_0 LTnewLM_34 Liftoff mRNA 731247 732347 . - . ID=LTnewLM_340024300.1;Parent=LTnewLM_340024300;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 731247 732347 . - 0 ID=LTnewLM_340024300.1:CDS:1;Parent=LTnewLM_340024300.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 731247 732347 . - . ID=LTnewLM_340024300.1:pep;Derives_from=LTnewLM_340024300.1;orthologous_to=LTnewLM_340024600.1,LTnewLM_340024700.1,LmjF.34.1560_mRNA,LmjF.34.1740_mRNA,LmjF.34.1900_mRNA;ortholog_cluster=OG0000069;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 731259 731651 . - . Parent=LTnewLM_340024300.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 732536 732865 0.89 - . ID=LTnewLM_340024400 LTnewLM_34 AUGUSTUS mRNA 732536 732865 0.89 - . ID=LTnewLM_340024400.1;Parent=LTnewLM_340024400 LTnewLM_34 AUGUSTUS CDS 732536 732865 0.89 - 0 ID=LTnewLM_340024400.1:CDS:1;Parent=LTnewLM_340024400.1 ### LTnewLM_34 . polypeptide 732536 732865 . - . ID=LTnewLM_340024400.1:pep;Derives_from=LTnewLM_340024400.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 734008 735938 0.66 - . ID=LTnewLM_340024500 LTnewLM_34 AUGUSTUS mRNA 734008 735938 0.66 - . ID=LTnewLM_340024500.1;Parent=LTnewLM_340024500 LTnewLM_34 AUGUSTUS CDS 734008 735707 0.98 - 2 ID=LTnewLM_340024500.1:CDS:1;Parent=LTnewLM_340024500.1 LTnewLM_34 AUGUSTUS CDS 735797 735938 0.66 - 0 ID=LTnewLM_340024500.1:CDS:2;Parent=LTnewLM_340024500.1 ### LTnewLM_34 . polypeptide 734008 735938 . - . ID=LTnewLM_340024500.1:pep;Derives_from=LTnewLM_340024500.1;orthologous_to=LTnewLM_000005400.1,LTnewLM_340024200.1;ortholog_cluster=OG0000456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 738676 739190 485 - . ID=LTnewLM_340024600:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.34.1780:mRNA 1 168;original_prot_length=205 LTnewLM_34 . pseudogenic_transcript 738676 739190 . - . ID=LTnewLM_340024600.1;Parent=LTnewLM_340024600:pseudogene LTnewLM_34 . pseudogenic_exon 738676 738864 . - . ID=LTnewLM_340024600.1:pseudogenic_exon:1;Parent=LTnewLM_340024600.1 LTnewLM_34 . pseudogenic_exon 738866 738925 . - . ID=LTnewLM_340024600.1:pseudogenic_exon:2;Parent=LTnewLM_340024600.1 LTnewLM_34 . pseudogenic_exon 738928 739011 . - . ID=LTnewLM_340024600.1:pseudogenic_exon:3;Parent=LTnewLM_340024600.1 LTnewLM_34 . pseudogenic_exon 739013 739039 . - . ID=LTnewLM_340024600.1:pseudogenic_exon:4;Parent=LTnewLM_340024600.1 LTnewLM_34 . pseudogenic_exon 739041 739190 . - . ID=LTnewLM_340024600.1:pseudogenic_exon:5;Parent=LTnewLM_340024600.1 ### LTnewLM_34 . polypeptide 738676 739190 . - . ID=LTnewLM_340024600.1:pep;Derives_from=LTnewLM_340024600.1;orthologous_to=LTnewLM_340024300.1,LTnewLM_340024700.1,LmjF.34.1560_mRNA,LmjF.34.1740_mRNA,LmjF.34.1900_mRNA;ortholog_cluster=OG0000069;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 738684 739148 . - . Parent=LTnewLM_340024600.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 . pseudogene 743067 743694 506 - . ID=LTnewLM_340024700:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.34.1780:mRNA 1 205;original_prot_length=205 LTnewLM_34 . pseudogenic_transcript 743067 743694 . - . ID=LTnewLM_340024700.1;Parent=LTnewLM_340024700:pseudogene LTnewLM_34 . pseudogenic_exon 743067 743132 . - . ID=LTnewLM_340024700.1:pseudogenic_exon:1;Parent=LTnewLM_340024700.1 LTnewLM_34 . pseudogenic_exon 743134 743241 . - . ID=LTnewLM_340024700.1:pseudogenic_exon:2;Parent=LTnewLM_340024700.1 LTnewLM_34 . pseudogenic_exon 743244 743537 . - . ID=LTnewLM_340024700.1:pseudogenic_exon:3;Parent=LTnewLM_340024700.1 LTnewLM_34 . pseudogenic_exon 743539 743694 . - . ID=LTnewLM_340024700.1:pseudogenic_exon:4;Parent=LTnewLM_340024700.1 ### LTnewLM_34 . polypeptide 743067 743694 . - . ID=LTnewLM_340024700.1:pep;Derives_from=LTnewLM_340024700.1;orthologous_to=LTnewLM_340024300.1,LTnewLM_340024600.1,LmjF.34.1560_mRNA,LmjF.34.1740_mRNA,LmjF.34.1900_mRNA;ortholog_cluster=OG0000069;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 743179 743652 . - . Parent=LTnewLM_340024700.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 744965 748084 1 - . ID=LTnewLM_340024800 LTnewLM_34 AUGUSTUS mRNA 744965 748084 1 - . ID=LTnewLM_340024800.1;Parent=LTnewLM_340024800 LTnewLM_34 AUGUSTUS CDS 744965 748084 1 - 0 ID=LTnewLM_340024800.1:CDS:1;Parent=LTnewLM_340024800.1 ### LTnewLM_34 . polypeptide 744965 748084 . - . ID=LTnewLM_340024800.1:pep;Derives_from=LTnewLM_340024800.1;orthologous_to=LmjF.34.1990_mRNA;ortholog_cluster=OG0005449;product=term%3DZeta toxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06414;Ontology_term=GO:0016301,GO:0005524 LTnewLM_34 Pfam protein_match 745484 745756 . - . Parent=LTnewLM_340024800.1:pep;Name=PF06414;signature_desc=Zeta toxin;Ontology_term=GO:0005524,GO:0016301 ### LTnewLM_34 . polypeptide 751223 752056 . - . ID=LTnewLM_340024900.1:pep;Derives_from=LTnewLM_340024900.1;orthologous_to=LmjF.34.2000.1_mRNA,LmjF.34.2000.2_mRNA;ortholog_cluster=OG0000544;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 751223 752187 . - . ID=LTnewLM_340024900.2:pep;Derives_from=LTnewLM_340024900.2;product=term%3Dhypothetical protein ### LTnewLM_34 . pseudogene 751223 752876 . - . ID=LTnewLM_340024900:pseudogene;coverage=0.994;sequence_ID=0.908;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.2000_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 751223 752105 . - . ID=LTnewLM_340024900.1;Parent=LTnewLM_340024900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 751223 752056 . - . ID=LTnewLM_340024900.1:pseudogenic_exon:1;Parent=LTnewLM_340024900.1;extra_copy_number=0 LTnewLM_34 . pseudogenic_transcript 751223 752876 . - . ID=LTnewLM_340024900.2;Parent=LTnewLM_340024900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 751223 752187 . - . ID=LTnewLM_340024900.2:pseudogenic_exon:1;Parent=LTnewLM_340024900.2;extra_copy_number=0 ### LTnewLM_34 AUGUSTUS gene 753982 754461 1 - . ID=LTnewLM_340025000 LTnewLM_34 AUGUSTUS mRNA 753982 754461 1 - . ID=LTnewLM_340025000.1;Parent=LTnewLM_340025000 LTnewLM_34 AUGUSTUS CDS 753982 754461 1 - 0 ID=LTnewLM_340025000.1:CDS:1;Parent=LTnewLM_340025000.1 ### LTnewLM_34 . polypeptide 753982 754461 . - . ID=LTnewLM_340025000.1:pep;Derives_from=LTnewLM_340025000.1;orthologous_to=LmjF.34.2010_mRNA;ortholog_cluster=OG0005450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 756261 758150 1 - . ID=LTnewLM_340025100 LTnewLM_34 AUGUSTUS mRNA 756261 758150 1 - . ID=LTnewLM_340025100.1;Parent=LTnewLM_340025100 LTnewLM_34 AUGUSTUS CDS 756261 758150 1 - 0 ID=LTnewLM_340025100.1:CDS:1;Parent=LTnewLM_340025100.1 ### LTnewLM_34 . polypeptide 756261 758150 . - . ID=LTnewLM_340025100.1:pep;Derives_from=LTnewLM_340025100.1;orthologous_to=LmjF.34.2020_mRNA;ortholog_cluster=OG0005451;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_34 Pfam protein_match 756987 757070 . - . Parent=LTnewLM_340025100.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_34 Pfam protein_match 757035 757184 . - . Parent=LTnewLM_340025100.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_34 AUGUSTUS gene 759746 763480 1 - . ID=LTnewLM_340025200 LTnewLM_34 AUGUSTUS mRNA 759746 763480 1 - . ID=LTnewLM_340025200.1;Parent=LTnewLM_340025200 LTnewLM_34 AUGUSTUS CDS 759746 763480 1 - 0 ID=LTnewLM_340025200.1:CDS:1;Parent=LTnewLM_340025200.1 ### LTnewLM_34 . polypeptide 759746 763480 . - . ID=LTnewLM_340025200.1:pep;Derives_from=LTnewLM_340025200.1;orthologous_to=LmjF.34.2030_mRNA;ortholog_cluster=OG0005452;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 771297 772607 1 - . ID=LTnewLM_340025300 LTnewLM_34 AUGUSTUS mRNA 771297 772607 1 - . ID=LTnewLM_340025300.1;Parent=LTnewLM_340025300 LTnewLM_34 AUGUSTUS CDS 771297 772607 1 - 0 ID=LTnewLM_340025300.1:CDS:1;Parent=LTnewLM_340025300.1 ### LTnewLM_34 . polypeptide 771297 772607 . - . ID=LTnewLM_340025300.1:pep;Derives_from=LTnewLM_340025300.1;orthologous_to=LmjF.34.2040_mRNA;ortholog_cluster=OG0005453;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 775642 776493 0.84 - . ID=LTnewLM_340025400 LTnewLM_34 AUGUSTUS mRNA 775642 776493 0.84 - . ID=LTnewLM_340025400.1;Parent=LTnewLM_340025400 LTnewLM_34 AUGUSTUS CDS 775642 776493 0.84 - 0 ID=LTnewLM_340025400.1:CDS:1;Parent=LTnewLM_340025400.1 ### LTnewLM_34 . polypeptide 775642 776493 . - . ID=LTnewLM_340025400.1:pep;Derives_from=LTnewLM_340025400.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 777688 780099 1 - . ID=LTnewLM_340025500 LTnewLM_34 AUGUSTUS mRNA 777688 780099 1 - . ID=LTnewLM_340025500.1;Parent=LTnewLM_340025500 LTnewLM_34 AUGUSTUS CDS 777688 780099 1 - 0 ID=LTnewLM_340025500.1:CDS:1;Parent=LTnewLM_340025500.1 ### LTnewLM_34 . polypeptide 777688 780099 . - . ID=LTnewLM_340025500.1:pep;Derives_from=LTnewLM_340025500.1;orthologous_to=LmjF.34.2050_mRNA;ortholog_cluster=OG0005454;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/DBP10CT (NUC160) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF08147;Ontology_term=GO:0003723,GO:0016818,GO:0005524,GO:0003676,GO:0005634 LTnewLM_34 Pfam protein_match 778003 778191 . - . Parent=LTnewLM_340025500.1:pep;Name=PF08147;signature_desc=DBP10CT (NUC160) domain;Ontology_term=GO:0003723,GO:0005524,GO:0016818,GO:0005634 LTnewLM_34 Pfam protein_match 779008 779337 . - . Parent=LTnewLM_340025500.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_34 Pfam protein_match 779473 779964 . - . Parent=LTnewLM_340025500.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_34 AUGUSTUS gene 780935 781882 1 - . ID=LTnewLM_340025600 LTnewLM_34 AUGUSTUS mRNA 780935 781882 1 - . ID=LTnewLM_340025600.1;Parent=LTnewLM_340025600 LTnewLM_34 AUGUSTUS CDS 780935 781882 1 - 0 ID=LTnewLM_340025600.1:CDS:1;Parent=LTnewLM_340025600.1 ### LTnewLM_34 . polypeptide 780935 781882 . - . ID=LTnewLM_340025600.1:pep;Derives_from=LTnewLM_340025600.1;orthologous_to=LmjF.34.2060_mRNA;ortholog_cluster=OG0005455;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 783550 786936 1 - . ID=LTnewLM_340025700 LTnewLM_34 AUGUSTUS mRNA 783550 786936 1 - . ID=LTnewLM_340025700.1;Parent=LTnewLM_340025700 LTnewLM_34 AUGUSTUS CDS 783550 786936 1 - 0 ID=LTnewLM_340025700.1:CDS:1;Parent=LTnewLM_340025700.1 ### LTnewLM_34 . polypeptide 783550 786936 . - . ID=LTnewLM_340025700.1:pep;Derives_from=LTnewLM_340025700.1;orthologous_to=LmjF.34.2070_mRNA;ortholog_cluster=OG0005456;product=term%3DFtsX-like permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02687;Ontology_term=GO:0016020 LTnewLM_34 Pfam protein_match 783598 783933 . - . Parent=LTnewLM_340025700.1:pep;Name=PF02687;signature_desc=FtsX-like permease family;Ontology_term=GO:0016020 LTnewLM_34 Pfam protein_match 785167 785514 . - . Parent=LTnewLM_340025700.1:pep;Name=PF02687;signature_desc=FtsX-like permease family;Ontology_term=GO:0016020 ### LTnewLM_34 AUGUSTUS gene 790931 791881 1 - . ID=LTnewLM_340025800 LTnewLM_34 AUGUSTUS mRNA 790931 791881 1 - . ID=LTnewLM_340025800.1;Parent=LTnewLM_340025800 LTnewLM_34 AUGUSTUS CDS 790931 791881 1 - 0 ID=LTnewLM_340025800.1:CDS:1;Parent=LTnewLM_340025800.1 ### LTnewLM_34 . polypeptide 790931 791881 . - . ID=LTnewLM_340025800.1:pep;Derives_from=LTnewLM_340025800.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 793445 799321 1 - . ID=LTnewLM_340025900 LTnewLM_34 AUGUSTUS mRNA 793445 799321 1 - . ID=LTnewLM_340025900.1;Parent=LTnewLM_340025900 LTnewLM_34 AUGUSTUS CDS 793445 799321 1 - 0 ID=LTnewLM_340025900.1:CDS:1;Parent=LTnewLM_340025900.1 ### LTnewLM_34 . polypeptide 793445 799321 . - . ID=LTnewLM_340025900.1:pep;Derives_from=LTnewLM_340025900.1;orthologous_to=LmjF.34.2080_mRNA;ortholog_cluster=OG0005457;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 800778 801935 1 - . ID=LTnewLM_340026000 LTnewLM_34 AUGUSTUS mRNA 800778 801935 1 - . ID=LTnewLM_340026000.1;Parent=LTnewLM_340026000 LTnewLM_34 AUGUSTUS CDS 800778 801935 1 - 0 ID=LTnewLM_340026000.1:CDS:1;Parent=LTnewLM_340026000.1 ### LTnewLM_34 . polypeptide 800778 801935 . - . ID=LTnewLM_340026000.1:pep;Derives_from=LTnewLM_340026000.1;orthologous_to=LmjF.34.2090_mRNA;ortholog_cluster=OG0005458;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 800961 801761 . - . Parent=LTnewLM_340026000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 800979 801761 . - . Parent=LTnewLM_340026000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_34 AUGUSTUS gene 804387 807428 1 - . ID=LTnewLM_340026100 LTnewLM_34 AUGUSTUS mRNA 804387 807428 1 - . ID=LTnewLM_340026100.1;Parent=LTnewLM_340026100 LTnewLM_34 AUGUSTUS CDS 804387 807428 1 - 0 ID=LTnewLM_340026100.1:CDS:1;Parent=LTnewLM_340026100.1 ### LTnewLM_34 . polypeptide 804387 807428 . - . ID=LTnewLM_340026100.1:pep;Derives_from=LTnewLM_340026100.1;orthologous_to=LmjF.34.2100_mRNA;ortholog_cluster=OG0005459;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 810487 812985 . - . ID=LTnewLM_340026200;coverage=1.0;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.2110_0 LTnewLM_34 Liftoff mRNA 810487 812985 . - . ID=LTnewLM_340026200.1;Parent=LTnewLM_340026200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 810487 812985 . - 0 ID=LTnewLM_340026200.1:CDS:1;Parent=LTnewLM_340026200.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 810487 812985 . - . ID=LTnewLM_340026200.1:pep;Derives_from=LTnewLM_340026200.1;orthologous_to=LmjF.34.2110_mRNA;ortholog_cluster=OG0005460;product=term%3DPLD-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13091 LTnewLM_34 Pfam protein_match 810658 811026 . - . Parent=LTnewLM_340026200.1:pep;Name=PF13091;signature_desc=PLD-like domain ### LTnewLM_34 AUGUSTUS gene 814489 815409 1 - . ID=LTnewLM_340026300 LTnewLM_34 AUGUSTUS mRNA 814489 815409 1 - . ID=LTnewLM_340026300.1;Parent=LTnewLM_340026300 LTnewLM_34 AUGUSTUS CDS 814489 815409 1 - 0 ID=LTnewLM_340026300.1:CDS:1;Parent=LTnewLM_340026300.1 ### LTnewLM_34 . polypeptide 814489 815409 . - . ID=LTnewLM_340026300.1:pep;Derives_from=LTnewLM_340026300.1;orthologous_to=LmjF.34.2120_mRNA;ortholog_cluster=OG0005461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 816759 817001 1 - . ID=LTnewLM_340026400 LTnewLM_34 AUGUSTUS mRNA 816759 817001 1 - . ID=LTnewLM_340026400.1;Parent=LTnewLM_340026400 LTnewLM_34 AUGUSTUS CDS 816759 817001 1 - 0 ID=LTnewLM_340026400.1:CDS:1;Parent=LTnewLM_340026400.1 ### LTnewLM_34 . polypeptide 816759 817001 . - . ID=LTnewLM_340026400.1:pep;Derives_from=LTnewLM_340026400.1;orthologous_to=LmjF.34.2125_mRNA;ortholog_cluster=OG0005462;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 816774 816977 . - . Parent=LTnewLM_340026400.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 816783 816983 . - . Parent=LTnewLM_340026400.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like ### LTnewLM_34 . pseudogene 818429 818906 . - . ID=LTnewLM_340026500:pseudogene;coverage=0.995;sequence_ID=0.914;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.2130_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 818429 818906 . - . ID=LTnewLM_340026500.1;Parent=LTnewLM_340026500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 818429 818906 . - . ID=LTnewLM_340026500.1:pseudogenic_exon:1;Parent=LTnewLM_340026500.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 818429 818906 . - . ID=LTnewLM_340026500.1:pep;Derives_from=LTnewLM_340026500.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 820075 820806 1 - . ID=LTnewLM_340026600 LTnewLM_34 AUGUSTUS mRNA 820075 820806 1 - . ID=LTnewLM_340026600.1;Parent=LTnewLM_340026600 LTnewLM_34 AUGUSTUS CDS 820075 820806 1 - 0 ID=LTnewLM_340026600.1:CDS:1;Parent=LTnewLM_340026600.1 ### LTnewLM_34 . polypeptide 820075 820806 . - . ID=LTnewLM_340026600.1:pep;Derives_from=LTnewLM_340026600.1;orthologous_to=LmjF.34.2140_mRNA;ortholog_cluster=OG0005463;product=term%3DSir2 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02146;Ontology_term=GO:0070403 LTnewLM_34 Pfam protein_match 820246 820773 . - . Parent=LTnewLM_340026600.1:pep;Name=PF02146;signature_desc=Sir2 family;Ontology_term=GO:0070403 ### LTnewLM_34 AUGUSTUS gene 824967 829367 1 - . ID=LTnewLM_340026700 LTnewLM_34 AUGUSTUS mRNA 824967 829367 1 - . ID=LTnewLM_340026700.1;Parent=LTnewLM_340026700 LTnewLM_34 AUGUSTUS CDS 824967 829367 1 - 0 ID=LTnewLM_340026700.1:CDS:1;Parent=LTnewLM_340026700.1 ### LTnewLM_34 . polypeptide 824967 829367 . - . ID=LTnewLM_340026700.1:pep;Derives_from=LTnewLM_340026700.1;orthologous_to=LmjF.34.2150_mRNA;ortholog_cluster=OG0005464;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_34 Pfam protein_match 825699 826268 . - . Parent=LTnewLM_340026700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_34 Pfam protein_match 825702 826640 . - . Parent=LTnewLM_340026700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_34 AUGUSTUS gene 831177 832652 1 - . ID=LTnewLM_340026800 LTnewLM_34 AUGUSTUS mRNA 831177 832652 1 - . ID=LTnewLM_340026800.1;Parent=LTnewLM_340026800 LTnewLM_34 AUGUSTUS CDS 831177 832652 1 - 0 ID=LTnewLM_340026800.1:CDS:1;Parent=LTnewLM_340026800.1 ### LTnewLM_34 . polypeptide 831177 832652 . - . ID=LTnewLM_340026800.1:pep;Derives_from=LTnewLM_340026800.1;orthologous_to=LmjF.34.2160_mRNA;ortholog_cluster=OG0005465;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 833981 835687 1 - . ID=LTnewLM_340026900 LTnewLM_34 AUGUSTUS mRNA 833981 835687 1 - . ID=LTnewLM_340026900.1;Parent=LTnewLM_340026900 LTnewLM_34 AUGUSTUS CDS 833981 835687 1 - 0 ID=LTnewLM_340026900.1:CDS:1;Parent=LTnewLM_340026900.1 ### LTnewLM_34 . polypeptide 833981 835687 . - . ID=LTnewLM_340026900.1:pep;Derives_from=LTnewLM_340026900.1;orthologous_to=LmjF.34.2170_mRNA;ortholog_cluster=OG0005466;product=term%3D8-oxoguanine DNA glycosylase%2C N-terminal domain/HhH-GPD superfamily base excision DNA repair protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07934|Pfam:PF00730;Ontology_term=GO:0006289,GO:0008534,GO:0006284,GO:0003684 LTnewLM_34 Pfam protein_match 834332 834979 . - . Parent=LTnewLM_340026900.1:pep;Name=PF00730;signature_desc=HhH-GPD superfamily base excision DNA repair protein;Ontology_term=GO:0006284 LTnewLM_34 Pfam protein_match 834986 835621 . - . Parent=LTnewLM_340026900.1:pep;Name=PF07934;signature_desc=8-oxoguanine DNA glycosylase%2C N-terminal domain;Ontology_term=GO:0003684,GO:0008534,GO:0006289 ### LTnewLM_34 AUGUSTUS gene 836568 841205 1 - . ID=LTnewLM_340027000 LTnewLM_34 AUGUSTUS mRNA 836568 841205 1 - . ID=LTnewLM_340027000.1;Parent=LTnewLM_340027000 LTnewLM_34 AUGUSTUS CDS 836568 841205 1 - 0 ID=LTnewLM_340027000.1:CDS:1;Parent=LTnewLM_340027000.1 ### LTnewLM_34 . polypeptide 836568 841205 . - . ID=LTnewLM_340027000.1:pep;Derives_from=LTnewLM_340027000.1;orthologous_to=LmjF.34.2180_mRNA;ortholog_cluster=OG0005467;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 848997 853742 1 - . ID=LTnewLM_340027100 LTnewLM_34 AUGUSTUS mRNA 848997 853742 1 - . ID=LTnewLM_340027100.1;Parent=LTnewLM_340027100 LTnewLM_34 AUGUSTUS CDS 848997 853742 1 - 0 ID=LTnewLM_340027100.1:CDS:1;Parent=LTnewLM_340027100.1 ### LTnewLM_34 . polypeptide 848997 853742 . - . ID=LTnewLM_340027100.1:pep;Derives_from=LTnewLM_340027100.1;orthologous_to=LmjF.34.2190_mRNA;ortholog_cluster=OG0005468;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Leucine rich repeat/Dual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF13855|Pfam:PF00782;Ontology_term=GO:0008138,GO:0006470,GO:0006468,GO:0004672,GO:0005515,GO:0005524 LTnewLM_34 Pfam protein_match 849066 849449 . - . Parent=LTnewLM_340027100.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 LTnewLM_34 Pfam protein_match 849924 850088 . - . Parent=LTnewLM_340027100.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 851328 851933 . - . Parent=LTnewLM_340027100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 851481 851930 . - . Parent=LTnewLM_340027100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_34 Pfam protein_match 852123 852818 . - . Parent=LTnewLM_340027100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_34 Pfam protein_match 852135 852836 . - . Parent=LTnewLM_340027100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_34 AUGUSTUS gene 858622 859923 1 - . ID=LTnewLM_340027200 LTnewLM_34 AUGUSTUS mRNA 858622 859923 1 - . ID=LTnewLM_340027200.1;Parent=LTnewLM_340027200 LTnewLM_34 AUGUSTUS CDS 858622 859923 1 - 0 ID=LTnewLM_340027200.1:CDS:1;Parent=LTnewLM_340027200.1 ### LTnewLM_34 . polypeptide 858622 859923 . - . ID=LTnewLM_340027200.1:pep;Derives_from=LTnewLM_340027200.1;orthologous_to=LmjF.34.2200_mRNA;ortholog_cluster=OG0005469;product=term%3DThioredoxin/Thioredoxin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF13098;Ontology_term=GO:0045454 LTnewLM_34 Pfam protein_match 859513 859818 . - . Parent=LTnewLM_340027200.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_34 Pfam protein_match 859594 859776 . - . Parent=LTnewLM_340027200.1:pep;Name=PF13098;signature_desc=Thioredoxin-like domain ### LTnewLM_34 AUGUSTUS gene 861538 862691 1 - . ID=LTnewLM_340027300 LTnewLM_34 AUGUSTUS mRNA 861538 862691 1 - . ID=LTnewLM_340027300.1;Parent=LTnewLM_340027300 LTnewLM_34 AUGUSTUS CDS 861538 861834 1 - 0 ID=LTnewLM_340027300.1:CDS:1;Parent=LTnewLM_340027300.1 LTnewLM_34 AUGUSTUS CDS 861903 862691 1 - 0 ID=LTnewLM_340027300.1:CDS:2;Parent=LTnewLM_340027300.1 ### LTnewLM_34 . polypeptide 861538 862691 . - . ID=LTnewLM_340027300.1:pep;Derives_from=LTnewLM_340027300.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 865112 868351 1 - . ID=LTnewLM_340027400 LTnewLM_34 AUGUSTUS mRNA 865112 868351 1 - . ID=LTnewLM_340027400.1;Parent=LTnewLM_340027400 LTnewLM_34 AUGUSTUS CDS 865112 868351 1 - 0 ID=LTnewLM_340027400.1:CDS:1;Parent=LTnewLM_340027400.1 ### LTnewLM_34 . polypeptide 865112 868351 . - . ID=LTnewLM_340027400.1:pep;Derives_from=LTnewLM_340027400.1;orthologous_to=LmjF.34.2210_mRNA;ortholog_cluster=OG0005470;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 869338 871836 1 - . ID=LTnewLM_340027500 LTnewLM_34 AUGUSTUS mRNA 869338 871836 1 - . ID=LTnewLM_340027500.1;Parent=LTnewLM_340027500 LTnewLM_34 AUGUSTUS CDS 869338 871836 1 - 0 ID=LTnewLM_340027500.1:CDS:1;Parent=LTnewLM_340027500.1 ### LTnewLM_34 . polypeptide 869338 871836 . - . ID=LTnewLM_340027500.1:pep;Derives_from=LTnewLM_340027500.1;orthologous_to=LmjF.34.2220_mRNA;ortholog_cluster=OG0005471;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_34 Pfam protein_match 869380 870591 . - . Parent=LTnewLM_340027500.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_34 AUGUSTUS gene 872789 873262 1 - . ID=LTnewLM_340027600 LTnewLM_34 AUGUSTUS mRNA 872789 873262 1 - . ID=LTnewLM_340027600.1;Parent=LTnewLM_340027600 LTnewLM_34 AUGUSTUS CDS 872789 873262 1 - 0 ID=LTnewLM_340027600.1:CDS:1;Parent=LTnewLM_340027600.1 ### LTnewLM_34 . polypeptide 872789 873262 . - . ID=LTnewLM_340027600.1:pep;Derives_from=LTnewLM_340027600.1;orthologous_to=LmjF.34.2230_mRNA;ortholog_cluster=OG0005472;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 874237 877785 1 - . ID=LTnewLM_340027700 LTnewLM_34 AUGUSTUS mRNA 874237 877785 1 - . ID=LTnewLM_340027700.1;Parent=LTnewLM_340027700 LTnewLM_34 AUGUSTUS CDS 874237 877785 1 - 0 ID=LTnewLM_340027700.1:CDS:1;Parent=LTnewLM_340027700.1 ### LTnewLM_34 . polypeptide 874237 877785 . - . ID=LTnewLM_340027700.1:pep;Derives_from=LTnewLM_340027700.1;orthologous_to=LmjF.34.2240_mRNA;ortholog_cluster=OG0005473;product=term%3DGlycosyl hydrolase family 65 central catalytic domain/Glycosyl hydrolase family 65%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03632|Pfam:PF03633;Ontology_term=GO:0003824,GO:0005975 LTnewLM_34 Pfam protein_match 875167 875295 . - . Parent=LTnewLM_340027700.1:pep;Name=PF03633;signature_desc=Glycosyl hydrolase family 65%2C C-terminal domain LTnewLM_34 Pfam protein_match 875320 876318 . - . Parent=LTnewLM_340027700.1:pep;Name=PF03632;signature_desc=Glycosyl hydrolase family 65 central catalytic domain;Ontology_term=GO:0003824,GO:0005975 ### LTnewLM_34 AUGUSTUS gene 881776 887547 1 - . ID=LTnewLM_340027800 LTnewLM_34 AUGUSTUS mRNA 881776 887547 1 - . ID=LTnewLM_340027800.1;Parent=LTnewLM_340027800 LTnewLM_34 AUGUSTUS CDS 881776 887547 1 - 0 ID=LTnewLM_340027800.1:CDS:1;Parent=LTnewLM_340027800.1 ### LTnewLM_34 . polypeptide 881776 887547 . - . ID=LTnewLM_340027800.1:pep;Derives_from=LTnewLM_340027800.1;orthologous_to=LmjF.34.2250_mRNA;ortholog_cluster=OG0005474;product=term%3DGalactose oxidase%2C central domain/Kelch motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13418|Pfam:PF01344;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 885985 886110 . - . Parent=LTnewLM_340027800.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_34 Pfam protein_match 885985 886110 . - . Parent=LTnewLM_340027800.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 888542 890848 1 - . ID=LTnewLM_340027900 LTnewLM_34 AUGUSTUS mRNA 888542 890848 1 - . ID=LTnewLM_340027900.1;Parent=LTnewLM_340027900 LTnewLM_34 AUGUSTUS CDS 888542 890848 1 - 0 ID=LTnewLM_340027900.1:CDS:1;Parent=LTnewLM_340027900.1 ### LTnewLM_34 . polypeptide 888542 890848 . - . ID=LTnewLM_340027900.1:pep;Derives_from=LTnewLM_340027900.1;orthologous_to=LmjF.34.2260_mRNA;ortholog_cluster=OG0005475;product=term%3DAAA domain/DEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)/Oligonucleotide/oligosaccharide-binding (OB)-fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13245|Pfam:PF13401|Pfam:PF00270|Pfam:PF00271|Pfam:PF04408|Pfam:PF07717;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_34 Pfam protein_match 888662 888943 . - . Parent=LTnewLM_340027900.1:pep;Name=PF07717;signature_desc=Oligonucleotide/oligosaccharide-binding (OB)-fold LTnewLM_34 Pfam protein_match 889166 889396 . - . Parent=LTnewLM_340027900.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_34 Pfam protein_match 889589 889852 . - . Parent=LTnewLM_340027900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_34 Pfam protein_match 890186 890611 . - . Parent=LTnewLM_340027900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_34 Pfam protein_match 890216 890614 . - . Parent=LTnewLM_340027900.1:pep;Name=PF13401;signature_desc=AAA domain LTnewLM_34 Pfam protein_match 890231 890617 . - . Parent=LTnewLM_340027900.1:pep;Name=PF13245;signature_desc=AAA domain ### LTnewLM_34 AUGUSTUS gene 891987 893612 1 - . ID=LTnewLM_340028000 LTnewLM_34 AUGUSTUS mRNA 891987 893612 1 - . ID=LTnewLM_340028000.1;Parent=LTnewLM_340028000 LTnewLM_34 AUGUSTUS CDS 891987 893612 1 - 0 ID=LTnewLM_340028000.1:CDS:1;Parent=LTnewLM_340028000.1 ### LTnewLM_34 . polypeptide 891987 893612 . - . ID=LTnewLM_340028000.1:pep;Derives_from=LTnewLM_340028000.1;orthologous_to=LmjF.34.2270_mRNA;ortholog_cluster=OG0005476;product=term%3DN-terminal EH-domain containing protein/Dynamin family/50S ribosome-binding GTPase/Domain of unknown function (DUF5600)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16880|Pfam:PF00350|Pfam:PF01926|Pfam:PF18150;Ontology_term=GO:0005525 LTnewLM_34 Pfam protein_match 892425 892739 . - . Parent=LTnewLM_340028000.1:pep;Name=PF18150;signature_desc=Domain of unknown function (DUF5600) LTnewLM_34 Pfam protein_match 892959 893432 . - . Parent=LTnewLM_340028000.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_34 Pfam protein_match 893298 893432 . - . Parent=LTnewLM_340028000.1:pep;Name=PF00350;signature_desc=Dynamin family LTnewLM_34 Pfam protein_match 893454 893528 . - . Parent=LTnewLM_340028000.1:pep;Name=PF16880;signature_desc=N-terminal EH-domain containing protein ### LTnewLM_34 AUGUSTUS gene 895374 897653 1 - . ID=LTnewLM_340028100 LTnewLM_34 AUGUSTUS mRNA 895374 897653 1 - . ID=LTnewLM_340028100.1;Parent=LTnewLM_340028100 LTnewLM_34 AUGUSTUS CDS 895374 897653 1 - 0 ID=LTnewLM_340028100.1:CDS:1;Parent=LTnewLM_340028100.1 ### LTnewLM_34 . polypeptide 895374 897653 . - . ID=LTnewLM_340028100.1:pep;Derives_from=LTnewLM_340028100.1;orthologous_to=LmjF.34.2280_mRNA;ortholog_cluster=OG0005477;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 899579 900574 1 - . ID=LTnewLM_340028200 LTnewLM_34 AUGUSTUS mRNA 899579 900574 1 - . ID=LTnewLM_340028200.1;Parent=LTnewLM_340028200 LTnewLM_34 AUGUSTUS CDS 899579 900574 1 - 0 ID=LTnewLM_340028200.1:CDS:1;Parent=LTnewLM_340028200.1 ### LTnewLM_34 . polypeptide 899579 900574 . - . ID=LTnewLM_340028200.1:pep;Derives_from=LTnewLM_340028200.1;orthologous_to=LmjF.34.2290_mRNA;ortholog_cluster=OG0005478;product=term%3DCofilin/tropomyosin-type actin-binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00241;Ontology_term=GO:0005622,GO:0003779 LTnewLM_34 Pfam protein_match 899696 900004 . - . Parent=LTnewLM_340028200.1:pep;Name=PF00241;signature_desc=Cofilin/tropomyosin-type actin-binding protein;Ontology_term=GO:0003779,GO:0005622 ### LTnewLM_34 AUGUSTUS gene 901438 903285 1.29 - . ID=LTnewLM_340028300 LTnewLM_34 AUGUSTUS mRNA 901438 903285 1 - . ID=LTnewLM_340028300.1;Parent=LTnewLM_340028300 LTnewLM_34 AUGUSTUS CDS 901438 903285 1 - 0 ID=LTnewLM_340028300.1:CDS:1;Parent=LTnewLM_340028300.1 LTnewLM_34 AUGUSTUS mRNA 901797 903285 0.29 - . ID=LTnewLM_340028300.2;Parent=LTnewLM_340028300 LTnewLM_34 AUGUSTUS CDS 901797 901827 0.36 - 1 ID=LTnewLM_340028300.2:CDS:1;Parent=LTnewLM_340028300.2 LTnewLM_34 AUGUSTUS CDS 901946 903285 0.44 - 0 ID=LTnewLM_340028300.2:CDS:2;Parent=LTnewLM_340028300.2 ### LTnewLM_34 . polypeptide 901438 903285 . - . ID=LTnewLM_340028300.1:pep;Derives_from=LTnewLM_340028300.1;orthologous_to=LTnewLM_340028300.2,LmjF.34.2300_mRNA;ortholog_cluster=OG0000457;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . polypeptide 901797 903285 . - . ID=LTnewLM_340028300.2:pep;Derives_from=LTnewLM_340028300.2;orthologous_to=LTnewLM_340028300.1,LmjF.34.2300_mRNA;ortholog_cluster=OG0000457;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 904400 904651 1 - . ID=LTnewLM_340028400 LTnewLM_34 AUGUSTUS mRNA 904400 904651 1 - . ID=LTnewLM_340028400.1;Parent=LTnewLM_340028400 LTnewLM_34 AUGUSTUS CDS 904400 904651 1 - 0 ID=LTnewLM_340028400.1:CDS:1;Parent=LTnewLM_340028400.1 ### LTnewLM_34 . polypeptide 904400 904651 . - . ID=LTnewLM_340028400.1:pep;Derives_from=LTnewLM_340028400.1;orthologous_to=LmjF.34.2310_mRNA;ortholog_cluster=OG0005479;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 905734 906132 1 - . ID=LTnewLM_340028500 LTnewLM_34 AUGUSTUS mRNA 905734 906132 1 - . ID=LTnewLM_340028500.1;Parent=LTnewLM_340028500 LTnewLM_34 AUGUSTUS CDS 905734 906132 1 - 0 ID=LTnewLM_340028500.1:CDS:1;Parent=LTnewLM_340028500.1 ### LTnewLM_34 . polypeptide 905734 906132 . - . ID=LTnewLM_340028500.1:pep;Derives_from=LTnewLM_340028500.1;orthologous_to=LmjF.34.2320_mRNA;ortholog_cluster=OG0005480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 907080 907511 1 - . ID=LTnewLM_340028600 LTnewLM_34 AUGUSTUS mRNA 907080 907511 1 - . ID=LTnewLM_340028600.1;Parent=LTnewLM_340028600 LTnewLM_34 AUGUSTUS CDS 907080 907511 1 - 0 ID=LTnewLM_340028600.1:CDS:1;Parent=LTnewLM_340028600.1 ### LTnewLM_34 . polypeptide 907080 907511 . - . ID=LTnewLM_340028600.1:pep;Derives_from=LTnewLM_340028600.1;orthologous_to=LmjF.34.2330_mRNA;ortholog_cluster=OG0005481;product=term%3DClathrin adaptor complex small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01217 LTnewLM_34 Pfam protein_match 907098 907511 . - . Parent=LTnewLM_340028600.1:pep;Name=PF01217;signature_desc=Clathrin adaptor complex small chain ### LTnewLM_34 . polypeptide 908758 910761 . - . ID=LTnewLM_340028700.1:pep;Derives_from=LTnewLM_340028700.1;orthologous_to=LTnewLM_340028700.2,LmjF.34.2340.1_mRNA,LmjF.34.2340.2_mRNA;ortholog_cluster=OG0000242;product=term%3DGlutaminyl-tRNA synthetase%2C non-specific RNA binding region part 1/OB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04558|Pfam:PF01336|Pfam:PF00152;Ontology_term=GO:0000166,GO:0005737,GO:0005524,GO:0004812,GO:0003676,GO:0006418 LTnewLM_34 Pfam protein_match 908785 909774 . - . Parent=LTnewLM_340028700.1:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_34 Pfam protein_match 909835 910047 . - . Parent=LTnewLM_340028700.1:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 910267 910731 . - . Parent=LTnewLM_340028700.1:pep;Name=PF04558;signature_desc=Glutaminyl-tRNA synthetase%2C non-specific RNA binding region part 1;Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418,GO:0005737 ### LTnewLM_34 . polypeptide 908758 911430 . - . ID=LTnewLM_340028700.2:pep;Derives_from=LTnewLM_340028700.2;orthologous_to=LTnewLM_340028700.1,LmjF.34.2340.1_mRNA,LmjF.34.2340.2_mRNA;ortholog_cluster=OG0000242;product=term%3DGlutaminyl-tRNA synthetase%2C non-specific RNA binding region part 1/OB-fold nucleic acid binding domain/tRNA synthetases class II (D%2C K and N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04558|Pfam:PF01336|Pfam:PF00152;Ontology_term=GO:0000166,GO:0005737,GO:0005524,GO:0004812,GO:0003676,GO:0006418 LTnewLM_34 Pfam protein_match 908785 909774 . - . Parent=LTnewLM_340028700.2:pep;Name=PF00152;signature_desc=tRNA synthetases class II (D%2C K and N);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_34 Pfam protein_match 909835 910047 . - . Parent=LTnewLM_340028700.2:pep;Name=PF01336;signature_desc=OB-fold nucleic acid binding domain;Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 910267 910728 . - . Parent=LTnewLM_340028700.2:pep;Name=PF04558;signature_desc=Glutaminyl-tRNA synthetase%2C non-specific RNA binding region part 1;Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418,GO:0005737 ### LTnewLM_34 Liftoff gene 908758 911715 . - . ID=LTnewLM_340028700;coverage=0.999;sequence_ID=0.951;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.34.2340_0 LTnewLM_34 Liftoff mRNA 908758 910835 . - . ID=LTnewLM_340028700.1;Parent=LTnewLM_340028700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 908758 910761 . - 0 ID=LTnewLM_340028700.1:CDS:1;Parent=LTnewLM_340028700.1;extra_copy_number=0 LTnewLM_34 Liftoff five_prime_UTR 910762 910835 . - . ID=LTnewLM_340028700:five_prime_UTR;Parent=LTnewLM_340028700.1;extra_copy_number=0 LTnewLM_34 Liftoff mRNA 908758 911715 . - . ID=LTnewLM_340028700.2;Parent=LTnewLM_340028700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 908758 911430 . - 0 ID=LTnewLM_340028700.2:CDS:1;Parent=LTnewLM_340028700.2;extra_copy_number=0 LTnewLM_34 Liftoff five_prime_UTR 911431 911715 . - . ID=LTnewLM_340028700:five_prime_UTR.1;Parent=LTnewLM_340028700.2;extra_copy_number=0 ### LTnewLM_34 AUGUSTUS gene 912562 913182 1 - . ID=LTnewLM_340028800 LTnewLM_34 AUGUSTUS mRNA 912562 913182 1 - . ID=LTnewLM_340028800.1;Parent=LTnewLM_340028800 LTnewLM_34 AUGUSTUS CDS 912562 913182 1 - 0 ID=LTnewLM_340028800.1:CDS:1;Parent=LTnewLM_340028800.1 ### LTnewLM_34 . polypeptide 912562 913182 . - . ID=LTnewLM_340028800.1:pep;Derives_from=LTnewLM_340028800.1;orthologous_to=LmjF.34.2350_mRNA;ortholog_cluster=OG0005482;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 915303 916598 1 - . ID=LTnewLM_340028900 LTnewLM_34 AUGUSTUS mRNA 915303 916598 1 - . ID=LTnewLM_340028900.1;Parent=LTnewLM_340028900 LTnewLM_34 AUGUSTUS CDS 915303 916598 1 - 0 ID=LTnewLM_340028900.1:CDS:1;Parent=LTnewLM_340028900.1 ### LTnewLM_34 . polypeptide 915303 916598 . - . ID=LTnewLM_340028900.1:pep;Derives_from=LTnewLM_340028900.1;orthologous_to=LmjF.34.2360_mRNA;ortholog_cluster=OG0005483;product=term%3DUncharacterized conserved protein H4 (DUF2046)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09755 LTnewLM_34 Pfam protein_match 916146 916541 . - . Parent=LTnewLM_340028900.1:pep;Name=PF09755;signature_desc=Uncharacterized conserved protein H4 (DUF2046) ### LTnewLM_34 AUGUSTUS gene 918414 919511 1 - . ID=LTnewLM_340029000 LTnewLM_34 AUGUSTUS mRNA 918414 919511 1 - . ID=LTnewLM_340029000.1;Parent=LTnewLM_340029000 LTnewLM_34 AUGUSTUS CDS 918414 919511 1 - 0 ID=LTnewLM_340029000.1:CDS:1;Parent=LTnewLM_340029000.1 ### LTnewLM_34 . polypeptide 918414 919511 . - . ID=LTnewLM_340029000.1:pep;Derives_from=LTnewLM_340029000.1;orthologous_to=LmjF.34.2370_mRNA;ortholog_cluster=OG0005484;product=term%3DHistone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00808;Ontology_term=GO:0043565,GO:0005622 LTnewLM_34 Pfam protein_match 918774 918941 . - . Parent=LTnewLM_340029000.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_34 AUGUSTUS gene 927908 928996 1 - . ID=LTnewLM_340029100 LTnewLM_34 AUGUSTUS mRNA 927908 928996 1 - . ID=LTnewLM_340029100.1;Parent=LTnewLM_340029100 LTnewLM_34 AUGUSTUS CDS 927908 928996 1 - 0 ID=LTnewLM_340029100.1:CDS:1;Parent=LTnewLM_340029100.1 ### LTnewLM_34 . polypeptide 927908 928996 . - . ID=LTnewLM_340029100.1:pep;Derives_from=LTnewLM_340029100.1;orthologous_to=LmjF.34.2380_mRNA;ortholog_cluster=OG0005485;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 934241 934786 1 - . ID=LTnewLM_340029200 LTnewLM_34 AUGUSTUS mRNA 934241 934786 1 - . ID=LTnewLM_340029200.1;Parent=LTnewLM_340029200 LTnewLM_34 AUGUSTUS CDS 934241 934786 1 - 0 ID=LTnewLM_340029200.1:CDS:1;Parent=LTnewLM_340029200.1 ### LTnewLM_34 . polypeptide 934241 934786 . - . ID=LTnewLM_340029200.1:pep;Derives_from=LTnewLM_340029200.1;orthologous_to=LmjF.34.2390_mRNA;ortholog_cluster=OG0005486;product=term%3DEF hand/EF-hand domain/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00036|Pfam:PF13405|Pfam:PF13202|Pfam:PF13499|Pfam:PF13833;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 934262 934408 . - . Parent=LTnewLM_340029200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_34 Pfam protein_match 934265 934336 . - . Parent=LTnewLM_340029200.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 934265 934339 . - . Parent=LTnewLM_340029200.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 934265 934447 . - . Parent=LTnewLM_340029200.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_34 Pfam protein_match 934595 934675 . - . Parent=LTnewLM_340029200.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 934595 934675 . - . Parent=LTnewLM_340029200.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 934610 934672 . - . Parent=LTnewLM_340029200.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_34 AUGUSTUS gene 935922 936926 1 - . ID=LTnewLM_340029300 LTnewLM_34 AUGUSTUS mRNA 935922 936926 1 - . ID=LTnewLM_340029300.1;Parent=LTnewLM_340029300 LTnewLM_34 AUGUSTUS CDS 935922 936926 1 - 0 ID=LTnewLM_340029300.1:CDS:1;Parent=LTnewLM_340029300.1 ### LTnewLM_34 . polypeptide 935922 936926 . - . ID=LTnewLM_340029300.1:pep;Derives_from=LTnewLM_340029300.1;orthologous_to=LmjF.34.2400_mRNA;ortholog_cluster=OG0005487;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 938671 939828 1 - . ID=LTnewLM_340029400 LTnewLM_34 AUGUSTUS mRNA 938671 939828 1 - . ID=LTnewLM_340029400.1;Parent=LTnewLM_340029400 LTnewLM_34 AUGUSTUS CDS 938671 939828 1 - 0 ID=LTnewLM_340029400.1:CDS:1;Parent=LTnewLM_340029400.1 ### LTnewLM_34 . polypeptide 938671 939828 . - . ID=LTnewLM_340029400.1:pep;Derives_from=LTnewLM_340029400.1;orthologous_to=LmjF.34.2410_mRNA;ortholog_cluster=OG0005488;product=term%3DAmino-transferase class IV%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01063;Ontology_term=GO:0003824,GO:0008152 LTnewLM_34 Pfam protein_match 938854 939555 . - . Parent=LTnewLM_340029400.1:pep;Name=PF01063;signature_desc=Amino-transferase class IV;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_34 AUGUSTUS gene 940547 942199 1 - . ID=LTnewLM_340029500 LTnewLM_34 AUGUSTUS mRNA 940547 942199 1 - . ID=LTnewLM_340029500.1;Parent=LTnewLM_340029500 LTnewLM_34 AUGUSTUS CDS 940547 942199 1 - 0 ID=LTnewLM_340029500.1:CDS:1;Parent=LTnewLM_340029500.1 ### LTnewLM_34 . polypeptide 940547 942199 . - . ID=LTnewLM_340029500.1:pep;Derives_from=LTnewLM_340029500.1;orthologous_to=LmjF.34.2420_mRNA;ortholog_cluster=OG0005489;product=term%3DGlycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00534|Pfam:PF13692;Ontology_term=GO:0009058 LTnewLM_34 Pfam protein_match 940721 941260 . - . Parent=LTnewLM_340029500.1:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_34 Pfam protein_match 940760 941248 . - . Parent=LTnewLM_340029500.1:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_34 AUGUSTUS gene 944843 947269 1 - . ID=LTnewLM_340029600 LTnewLM_34 AUGUSTUS mRNA 944843 947269 1 - . ID=LTnewLM_340029600.1;Parent=LTnewLM_340029600 LTnewLM_34 AUGUSTUS CDS 944843 947269 1 - 0 ID=LTnewLM_340029600.1:CDS:1;Parent=LTnewLM_340029600.1 ### LTnewLM_34 . polypeptide 944843 947269 . - . ID=LTnewLM_340029600.1:pep;Derives_from=LTnewLM_340029600.1;orthologous_to=LmjF.34.2430_mRNA;ortholog_cluster=OG0005490;product=term%3DTetratricopeptide repeat/DnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF00226;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 944972 945172 . - . Parent=LTnewLM_340029600.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_34 Pfam protein_match 945248 945337 . - . Parent=LTnewLM_340029600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 945347 945436 . - . Parent=LTnewLM_340029600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 949850 950416 1 - . ID=LTnewLM_340029700 LTnewLM_34 AUGUSTUS mRNA 949850 950416 1 - . ID=LTnewLM_340029700.1;Parent=LTnewLM_340029700 LTnewLM_34 AUGUSTUS CDS 949850 950416 1 - 0 ID=LTnewLM_340029700.1:CDS:1;Parent=LTnewLM_340029700.1 ### LTnewLM_34 . polypeptide 949850 950416 . - . ID=LTnewLM_340029700.1:pep;Derives_from=LTnewLM_340029700.1;orthologous_to=LmjF.34.2440_mRNA;ortholog_cluster=OG0005491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 952358 957979 1 - . ID=LTnewLM_340029800 LTnewLM_34 AUGUSTUS mRNA 952358 957979 1 - . ID=LTnewLM_340029800.1;Parent=LTnewLM_340029800 LTnewLM_34 AUGUSTUS CDS 952358 957979 1 - 0 ID=LTnewLM_340029800.1:CDS:1;Parent=LTnewLM_340029800.1 ### LTnewLM_34 . polypeptide 952358 957979 . - . ID=LTnewLM_340029800.1:pep;Derives_from=LTnewLM_340029800.1;orthologous_to=LmjF.34.2450_mRNA;ortholog_cluster=OG0005492;product=term%3DSec7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01369;Ontology_term=GO:0005086,GO:0032012 LTnewLM_34 Pfam protein_match 955325 956041 . - . Parent=LTnewLM_340029800.1:pep;Name=PF01369;signature_desc=Sec7 domain;Ontology_term=GO:0005086,GO:0032012 ### LTnewLM_34 AUGUSTUS gene 962905 965532 1 - . ID=LTnewLM_340029900 LTnewLM_34 AUGUSTUS mRNA 962905 965532 1 - . ID=LTnewLM_340029900.1;Parent=LTnewLM_340029900 LTnewLM_34 AUGUSTUS CDS 962905 965532 1 - 0 ID=LTnewLM_340029900.1:CDS:1;Parent=LTnewLM_340029900.1 ### LTnewLM_34 . polypeptide 962905 965532 . - . ID=LTnewLM_340029900.1:pep;Derives_from=LTnewLM_340029900.1;orthologous_to=LmjF.34.2460_mRNA;ortholog_cluster=OG0005493;product=term%3DElongation factor Tu GTP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009;Ontology_term=GO:0003924,GO:0005525 LTnewLM_34 Pfam protein_match 963547 964392 . - . Parent=LTnewLM_340029900.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_34 AUGUSTUS gene 967172 967606 1 - . ID=LTnewLM_340030000 LTnewLM_34 AUGUSTUS mRNA 967172 967606 1 - . ID=LTnewLM_340030000.1;Parent=LTnewLM_340030000 LTnewLM_34 AUGUSTUS CDS 967172 967606 1 - 0 ID=LTnewLM_340030000.1:CDS:1;Parent=LTnewLM_340030000.1 ### LTnewLM_34 . polypeptide 967172 967606 . - . ID=LTnewLM_340030000.1:pep;Derives_from=LTnewLM_340030000.1;orthologous_to=LTnewLM_100005800.1,LmjF.10.0070_mRNA,LmjF.34.2470_mRNA;ortholog_cluster=OG0000108;product=term%3DRibosomal protein L35Ae%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01247;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_34 Pfam protein_match 967196 967510 . - . Parent=LTnewLM_340030000.1:pep;Name=PF01247;signature_desc=Ribosomal protein L35Ae;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 968608 969024 1 - . ID=LTnewLM_340030100 LTnewLM_34 AUGUSTUS mRNA 968608 969024 1 - . ID=LTnewLM_340030100.1;Parent=LTnewLM_340030100 LTnewLM_34 AUGUSTUS CDS 968608 969024 1 - 0 ID=LTnewLM_340030100.1:CDS:1;Parent=LTnewLM_340030100.1 ### LTnewLM_34 . polypeptide 968608 969024 . - . ID=LTnewLM_340030100.1:pep;Derives_from=LTnewLM_340030100.1;orthologous_to=LmjF.34.2473_mRNA;ortholog_cluster=OG0005494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 971395 972528 1 - . ID=LTnewLM_340030200 LTnewLM_34 AUGUSTUS mRNA 971395 972528 1 - . ID=LTnewLM_340030200.1;Parent=LTnewLM_340030200 LTnewLM_34 AUGUSTUS CDS 971395 972528 1 - 0 ID=LTnewLM_340030200.1:CDS:1;Parent=LTnewLM_340030200.1 ### LTnewLM_34 . polypeptide 971395 972528 . - . ID=LTnewLM_340030200.1:pep;Derives_from=LTnewLM_340030200.1;orthologous_to=LmjF.34.2476_mRNA;ortholog_cluster=OG0005495;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 974706 975923 1 - . ID=LTnewLM_340030300 LTnewLM_34 AUGUSTUS mRNA 974706 975923 1 - . ID=LTnewLM_340030300.1;Parent=LTnewLM_340030300 LTnewLM_34 AUGUSTUS CDS 974706 975923 1 - 0 ID=LTnewLM_340030300.1:CDS:1;Parent=LTnewLM_340030300.1 ### LTnewLM_34 . polypeptide 974706 975923 . - . ID=LTnewLM_340030300.1:pep;Derives_from=LTnewLM_340030300.1;orthologous_to=LmjF.34.2479_mRNA;ortholog_cluster=OG0005496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 977430 980654 1 - . ID=LTnewLM_340030400 LTnewLM_34 AUGUSTUS mRNA 977430 980654 1 - . ID=LTnewLM_340030400.1;Parent=LTnewLM_340030400 LTnewLM_34 AUGUSTUS CDS 977430 980654 1 - 0 ID=LTnewLM_340030400.1:CDS:1;Parent=LTnewLM_340030400.1 ### LTnewLM_34 . polypeptide 977430 980654 . - . ID=LTnewLM_340030400.1:pep;Derives_from=LTnewLM_340030400.1;orthologous_to=LmjF.34.2480_mRNA;ortholog_cluster=OG0005497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 981686 982765 1 - . ID=LTnewLM_340030500 LTnewLM_34 AUGUSTUS mRNA 981686 982765 1 - . ID=LTnewLM_340030500.1;Parent=LTnewLM_340030500 LTnewLM_34 AUGUSTUS CDS 981686 982765 1 - 0 ID=LTnewLM_340030500.1:CDS:1;Parent=LTnewLM_340030500.1 ### LTnewLM_34 . polypeptide 981686 982765 . - . ID=LTnewLM_340030500.1:pep;Derives_from=LTnewLM_340030500.1;orthologous_to=LmjF.34.2485_mRNA;ortholog_cluster=OG0005498;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_34 Pfam protein_match 982034 982096 . - . Parent=LTnewLM_340030500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_34 AUGUSTUS gene 983658 985391 1 - . ID=LTnewLM_340030600 LTnewLM_34 AUGUSTUS mRNA 983658 985391 1 - . ID=LTnewLM_340030600.1;Parent=LTnewLM_340030600 LTnewLM_34 AUGUSTUS CDS 983658 985391 1 - 0 ID=LTnewLM_340030600.1:CDS:1;Parent=LTnewLM_340030600.1 ### LTnewLM_34 . polypeptide 983658 985391 . - . ID=LTnewLM_340030600.1:pep;Derives_from=LTnewLM_340030600.1;orthologous_to=LmjF.34.2490_mRNA;ortholog_cluster=OG0005499;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 994518 995693 1 - . ID=LTnewLM_340030700 LTnewLM_34 AUGUSTUS mRNA 994518 995693 1 - . ID=LTnewLM_340030700.1;Parent=LTnewLM_340030700 LTnewLM_34 AUGUSTUS CDS 994518 995693 1 - 0 ID=LTnewLM_340030700.1:CDS:1;Parent=LTnewLM_340030700.1 ### LTnewLM_34 . polypeptide 994518 995693 . - . ID=LTnewLM_340030700.1:pep;Derives_from=LTnewLM_340030700.1;orthologous_to=LmjF.34.2500_mRNA;ortholog_cluster=OG0005500;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 994584 995342 . - . Parent=LTnewLM_340030700.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_34 AUGUSTUS gene 999613 1000968 1 - . ID=LTnewLM_340030800 LTnewLM_34 AUGUSTUS mRNA 999613 1000968 1 - . ID=LTnewLM_340030800.1;Parent=LTnewLM_340030800 LTnewLM_34 AUGUSTUS CDS 999613 1000968 1 - 0 ID=LTnewLM_340030800.1:CDS:1;Parent=LTnewLM_340030800.1 ### LTnewLM_34 . polypeptide 999613 1000968 . - . ID=LTnewLM_340030800.1:pep;Derives_from=LTnewLM_340030800.1;orthologous_to=LTnewLM_120005000.1,LmjF.34.2510_mRNA;ortholog_cluster=OG0000458;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 999727 1000485 . - . Parent=LTnewLM_340030800.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_34 . pseudogene 1002071 1002408 . - . ID=LTnewLM_340030900:pseudogene;coverage=0.988;sequence_ID=0.897;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.2515_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1002071 1002408 . - . ID=LTnewLM_340030900.1;Parent=LTnewLM_340030900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1002071 1002408 . - . ID=LTnewLM_340030900.1:pseudogenic_exon:1;Parent=LTnewLM_340030900.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1002071 1002408 . - . ID=LTnewLM_340030900.1:pep;Derives_from=LTnewLM_340030900.1;orthologous_to=LmjF.34.2515_mRNA;ortholog_cluster=OG0007646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1003670 1010941 1 - . ID=LTnewLM_340031000 LTnewLM_34 AUGUSTUS mRNA 1003670 1010941 1 - . ID=LTnewLM_340031000.1;Parent=LTnewLM_340031000 LTnewLM_34 AUGUSTUS CDS 1003670 1010941 1 - 0 ID=LTnewLM_340031000.1:CDS:1;Parent=LTnewLM_340031000.1 ### LTnewLM_34 . polypeptide 1003670 1010941 . - . ID=LTnewLM_340031000.1:pep;Derives_from=LTnewLM_340031000.1;orthologous_to=LmjF.34.2520_mRNA;ortholog_cluster=OG0005501;product=term%3DGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain/Domain of unknown function (DUF1981)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12783|Pfam:PF01369|Pfam:PF09324;Ontology_term=GO:0005086,GO:0032012 LTnewLM_34 Pfam protein_match 1005794 1006021 . - . Parent=LTnewLM_340031000.1:pep;Name=PF09324;signature_desc=Domain of unknown function (DUF1981) LTnewLM_34 Pfam protein_match 1007495 1007956 . - . Parent=LTnewLM_340031000.1:pep;Name=PF01369;signature_desc=Sec7 domain;Ontology_term=GO:0005086,GO:0032012 LTnewLM_34 Pfam protein_match 1008842 1009228 . - . Parent=LTnewLM_340031000.1:pep;Name=PF12783;signature_desc=Guanine nucleotide exchange factor in Golgi transport N-terminal ### LTnewLM_34 AUGUSTUS gene 1012643 1024060 0.43 - . ID=LTnewLM_340031100 LTnewLM_34 AUGUSTUS mRNA 1012643 1024060 0.43 - . ID=LTnewLM_340031100.1;Parent=LTnewLM_340031100 LTnewLM_34 AUGUSTUS CDS 1012643 1018511 0.63 - 1 ID=LTnewLM_340031100.1:CDS:1;Parent=LTnewLM_340031100.1 LTnewLM_34 AUGUSTUS CDS 1018623 1024060 0.61 - 0 ID=LTnewLM_340031100.1:CDS:2;Parent=LTnewLM_340031100.1 ### LTnewLM_34 . polypeptide 1012643 1024060 . - . ID=LTnewLM_340031100.1:pep;Derives_from=LTnewLM_340031100.1;orthologous_to=LmjF.34.2530_mRNA;ortholog_cluster=OG0005502;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1030332 1032944 1 + . ID=LTnewLM_340031200 LTnewLM_34 AUGUSTUS mRNA 1030332 1032944 1 + . ID=LTnewLM_340031200.1;Parent=LTnewLM_340031200 LTnewLM_34 AUGUSTUS CDS 1030332 1032944 1 + 0 ID=LTnewLM_340031200.1:CDS:1;Parent=LTnewLM_340031200.1 ### LTnewLM_34 . polypeptide 1030332 1032944 . + . ID=LTnewLM_340031200.1:pep;Derives_from=LTnewLM_340031200.1;orthologous_to=LmjF.34.2540_mRNA;ortholog_cluster=OG0005503;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1036190 1038043 1 + . ID=LTnewLM_340031300 LTnewLM_34 AUGUSTUS mRNA 1036190 1038043 1 + . ID=LTnewLM_340031300.1;Parent=LTnewLM_340031300 LTnewLM_34 AUGUSTUS CDS 1036190 1038043 1 + 0 ID=LTnewLM_340031300.1:CDS:1;Parent=LTnewLM_340031300.1 ### LTnewLM_34 . polypeptide 1036190 1038043 . + . ID=LTnewLM_340031300.1:pep;Derives_from=LTnewLM_340031300.1;orthologous_to=LmjF.34.2550_mRNA;ortholog_cluster=OG0005504;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 1042712 1052165 . + . ID=LTnewLM_340031400:pseudogene;coverage=0.907;sequence_ID=0.799;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.2560_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1042712 1052165 . + . ID=LTnewLM_340031400.1;Parent=LTnewLM_340031400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1042712 1052165 . + . ID=LTnewLM_340031400.1:pseudogenic_exon:1;Parent=LTnewLM_340031400.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1042712 1052165 . + . ID=LTnewLM_340031400.1:pep;Derives_from=LTnewLM_340031400.1;orthologous_to=LmjF.34.2560_mRNA;ortholog_cluster=OG0007647;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1053645 1055318 1 + . ID=LTnewLM_340031500 LTnewLM_34 AUGUSTUS mRNA 1053645 1055318 1 + . ID=LTnewLM_340031500.1;Parent=LTnewLM_340031500 LTnewLM_34 AUGUSTUS CDS 1053645 1055318 1 + 0 ID=LTnewLM_340031500.1:CDS:1;Parent=LTnewLM_340031500.1 ### LTnewLM_34 . polypeptide 1053645 1055318 . + . ID=LTnewLM_340031500.1:pep;Derives_from=LTnewLM_340031500.1;orthologous_to=LmjF.34.2570_mRNA;ortholog_cluster=OG0005505;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1058705 1059322 1 + . ID=LTnewLM_340031600 LTnewLM_34 AUGUSTUS mRNA 1058705 1059322 1 + . ID=LTnewLM_340031600.1;Parent=LTnewLM_340031600 LTnewLM_34 AUGUSTUS CDS 1058705 1059322 1 + 0 ID=LTnewLM_340031600.1:CDS:1;Parent=LTnewLM_340031600.1 ### LTnewLM_34 . polypeptide 1058705 1059322 . + . ID=LTnewLM_340031600.1:pep;Derives_from=LTnewLM_340031600.1;orthologous_to=LmjF.34.2580_mRNA;ortholog_cluster=OG0005506;product=term%3DAlba%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01918;Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 1058786 1058986 . + . Parent=LTnewLM_340031600.1:pep;Name=PF01918;signature_desc=Alba;Ontology_term=GO:0003676 ### LTnewLM_34 AUGUSTUS gene 1064821 1066227 1 + . ID=LTnewLM_340031700 LTnewLM_34 AUGUSTUS mRNA 1064821 1066227 1 + . ID=LTnewLM_340031700.1;Parent=LTnewLM_340031700 LTnewLM_34 AUGUSTUS CDS 1064821 1066227 1 + 0 ID=LTnewLM_340031700.1:CDS:1;Parent=LTnewLM_340031700.1 ### LTnewLM_34 . polypeptide 1064821 1066227 . + . ID=LTnewLM_340031700.1:pep;Derives_from=LTnewLM_340031700.1;orthologous_to=LmjF.34.2590_mRNA;ortholog_cluster=OG0005507;product=term%3DAdaptor complexes medium subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00928;Ontology_term=GO:0016192,GO:0005515,GO:0006886,GO:0030131 LTnewLM_34 Pfam protein_match 1065358 1066215 . + . Parent=LTnewLM_340031700.1:pep;Name=PF00928;signature_desc=Adaptor complexes medium subunit family;Ontology_term=GO:0005515,GO:0006886,GO:0016192,GO:0030131 ### LTnewLM_34 AUGUSTUS gene 1067229 1067498 1 + . ID=LTnewLM_340031800 LTnewLM_34 AUGUSTUS mRNA 1067229 1067498 1 + . ID=LTnewLM_340031800.1;Parent=LTnewLM_340031800 LTnewLM_34 AUGUSTUS CDS 1067229 1067498 1 + 0 ID=LTnewLM_340031800.1:CDS:1;Parent=LTnewLM_340031800.1 ### LTnewLM_34 . polypeptide 1067229 1067498 . + . ID=LTnewLM_340031800.1:pep;Derives_from=LTnewLM_340031800.1;orthologous_to=LmjF.34.2600_mRNA;ortholog_cluster=OG0005508;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_34 Pfam protein_match 1067238 1067456 . + . Parent=LTnewLM_340031800.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_34 AUGUSTUS gene 1071055 1072506 1 + . ID=LTnewLM_340031900 LTnewLM_34 AUGUSTUS mRNA 1071055 1072506 1 + . ID=LTnewLM_340031900.1;Parent=LTnewLM_340031900 LTnewLM_34 AUGUSTUS CDS 1071055 1072506 1 + 0 ID=LTnewLM_340031900.1:CDS:1;Parent=LTnewLM_340031900.1 ### LTnewLM_34 . polypeptide 1071055 1072506 . + . ID=LTnewLM_340031900.1:pep;Derives_from=LTnewLM_340031900.1;orthologous_to=LmjF.34.2610_mRNA;ortholog_cluster=OG0005509;product=term%3DTIP49 P-loop domain/ATPase family associated with various cellular activities (AAA)/TIP49 AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06068|Pfam:PF00004|Pfam:PF17856;Ontology_term=GO:0005524,GO:0003678 LTnewLM_34 Pfam protein_match 1071109 1072149 . + . Parent=LTnewLM_340031900.1:pep;Name=PF06068;signature_desc=TIP49 P-loop domain;Ontology_term=GO:0003678,GO:0005524 LTnewLM_34 Pfam protein_match 1071265 1071411 . + . Parent=LTnewLM_340031900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 1072165 1072359 . + . Parent=LTnewLM_340031900.1:pep;Name=PF17856;signature_desc=TIP49 AAA-lid domain ### LTnewLM_34 AUGUSTUS gene 1073532 1075595 1 + . ID=LTnewLM_340032000 LTnewLM_34 AUGUSTUS mRNA 1073532 1075595 1 + . ID=LTnewLM_340032000.1;Parent=LTnewLM_340032000 LTnewLM_34 AUGUSTUS CDS 1073532 1075595 1 + 0 ID=LTnewLM_340032000.1:CDS:1;Parent=LTnewLM_340032000.1 ### LTnewLM_34 . polypeptide 1073532 1075595 . + . ID=LTnewLM_340032000.1:pep;Derives_from=LTnewLM_340032000.1;orthologous_to=LmjF.34.2620_mRNA;ortholog_cluster=OG0005510;product=term%3DSuv3 C-terminal domain 1/Mitochondrial degradasome RNA helicase subunit C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18147|Pfam:PF12513;Ontology_term=GO:0016817 LTnewLM_34 Pfam protein_match 1075179 1075304 . + . Parent=LTnewLM_340032000.1:pep;Name=PF18147;signature_desc=Suv3 C-terminal domain 1 LTnewLM_34 Pfam protein_match 1075452 1075568 . + . Parent=LTnewLM_340032000.1:pep;Name=PF12513;signature_desc=Mitochondrial degradasome RNA helicase subunit C terminal;Ontology_term=GO:0016817 ### LTnewLM_34 AUGUSTUS gene 1076896 1081371 1 + . ID=LTnewLM_340032100 LTnewLM_34 AUGUSTUS mRNA 1076896 1081371 1 + . ID=LTnewLM_340032100.1;Parent=LTnewLM_340032100 LTnewLM_34 AUGUSTUS CDS 1076896 1081371 1 + 0 ID=LTnewLM_340032100.1:CDS:1;Parent=LTnewLM_340032100.1 ### LTnewLM_34 . polypeptide 1076896 1081371 . + . ID=LTnewLM_340032100.1:pep;Derives_from=LTnewLM_340032100.1;orthologous_to=LmjF.34.2630_mRNA;ortholog_cluster=OG0005511;product=term%3DPhospholipid-translocating ATPase N-terminal/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Phospholipid-translocating P-type ATPase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16209|Pfam:PF00702|Pfam:PF13246|Pfam:PF16212 LTnewLM_34 Pfam protein_match 1076962 1077153 . + . Parent=LTnewLM_340032100.1:pep;Name=PF16209;signature_desc=Phospholipid-translocating ATPase N-terminal LTnewLM_34 Pfam protein_match 1078678 1079700 . + . Parent=LTnewLM_340032100.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_34 Pfam protein_match 1079008 1079337 . + . Parent=LTnewLM_340032100.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_34 Pfam protein_match 1080439 1081164 . + . Parent=LTnewLM_340032100.1:pep;Name=PF16212;signature_desc=Phospholipid-translocating P-type ATPase C-terminal ### LTnewLM_34 AUGUSTUS gene 1082464 1086564 1 + . ID=LTnewLM_340032200 LTnewLM_34 AUGUSTUS mRNA 1082464 1086564 1 + . ID=LTnewLM_340032200.1;Parent=LTnewLM_340032200 LTnewLM_34 AUGUSTUS CDS 1082464 1086564 1 + 0 ID=LTnewLM_340032200.1:CDS:1;Parent=LTnewLM_340032200.1 ### LTnewLM_34 . polypeptide 1082464 1086564 . + . ID=LTnewLM_340032200.1:pep;Derives_from=LTnewLM_340032200.1;orthologous_to=LmjF.34.2640_mRNA;ortholog_cluster=OG0005512;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1087314 1089140 1 + . ID=LTnewLM_340032300 LTnewLM_34 AUGUSTUS mRNA 1087314 1089140 1 + . ID=LTnewLM_340032300.1;Parent=LTnewLM_340032300 LTnewLM_34 AUGUSTUS CDS 1087314 1089140 1 + 0 ID=LTnewLM_340032300.1:CDS:1;Parent=LTnewLM_340032300.1 ### LTnewLM_34 . polypeptide 1087314 1089140 . + . ID=LTnewLM_340032300.1:pep;Derives_from=LTnewLM_340032300.1;orthologous_to=LmjF.34.2650_mRNA;ortholog_cluster=OG0005513;product=term%3DCyclin M transmembrane N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01595 LTnewLM_34 Pfam protein_match 1087578 1088054 . + . Parent=LTnewLM_340032300.1:pep;Name=PF01595;signature_desc=Cyclin M transmembrane N-terminal domain ### LTnewLM_34 AUGUSTUS gene 1091232 1093952 1 + . ID=LTnewLM_340032400 LTnewLM_34 AUGUSTUS mRNA 1091232 1093952 1 + . ID=LTnewLM_340032400.1;Parent=LTnewLM_340032400 LTnewLM_34 AUGUSTUS CDS 1091232 1093952 1 + 0 ID=LTnewLM_340032400.1:CDS:1;Parent=LTnewLM_340032400.1 ### LTnewLM_34 . polypeptide 1091232 1093952 . + . ID=LTnewLM_340032400.1:pep;Derives_from=LTnewLM_340032400.1;orthologous_to=LmjF.34.2660_mRNA;ortholog_cluster=OG0005514;product=term%3DVps52 / Sac2 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04129 LTnewLM_34 Pfam protein_match 1091433 1092107 . + . Parent=LTnewLM_340032400.1:pep;Name=PF04129;signature_desc=Vps52 / Sac2 family ### LTnewLM_34 AUGUSTUS gene 1095548 1097422 1 + . ID=LTnewLM_340032500 LTnewLM_34 AUGUSTUS mRNA 1095548 1097422 1 + . ID=LTnewLM_340032500.1;Parent=LTnewLM_340032500 LTnewLM_34 AUGUSTUS CDS 1095548 1097422 1 + 0 ID=LTnewLM_340032500.1:CDS:1;Parent=LTnewLM_340032500.1 ### LTnewLM_34 . polypeptide 1095548 1097422 . + . ID=LTnewLM_340032500.1:pep;Derives_from=LTnewLM_340032500.1;orthologous_to=LmjF.34.2670_mRNA;ortholog_cluster=OG0005515;product=term%3DFlavodoxin/FAD binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00258|Pfam:PF00667|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_34 Pfam protein_match 1095563 1095976 . + . Parent=LTnewLM_340032500.1:pep;Name=PF00258;signature_desc=Flavodoxin;Ontology_term=GO:0010181,GO:0016491 LTnewLM_34 Pfam protein_match 1096175 1096852 . + . Parent=LTnewLM_340032500.1:pep;Name=PF00667;signature_desc=FAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_34 Pfam protein_match 1096946 1097296 . + . Parent=LTnewLM_340032500.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 1098389 1100032 1 + . ID=LTnewLM_340032600 LTnewLM_34 AUGUSTUS mRNA 1098389 1100032 1 + . ID=LTnewLM_340032600.1;Parent=LTnewLM_340032600 LTnewLM_34 AUGUSTUS CDS 1098389 1100032 1 + 0 ID=LTnewLM_340032600.1:CDS:1;Parent=LTnewLM_340032600.1 ### LTnewLM_34 . polypeptide 1098389 1100032 . + . ID=LTnewLM_340032600.1:pep;Derives_from=LTnewLM_340032600.1;orthologous_to=LmjF.34.2680_mRNA;ortholog_cluster=OG0005516;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1098731 1098823 . + . Parent=LTnewLM_340032600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1098869 1098958 . + . Parent=LTnewLM_340032600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 1101230 1102948 1 + . ID=LTnewLM_340032700 LTnewLM_34 AUGUSTUS mRNA 1101230 1102948 1 + . ID=LTnewLM_340032700.1;Parent=LTnewLM_340032700 LTnewLM_34 AUGUSTUS CDS 1101230 1102948 1 + 0 ID=LTnewLM_340032700.1:CDS:1;Parent=LTnewLM_340032700.1 ### LTnewLM_34 . polypeptide 1101230 1102948 . + . ID=LTnewLM_340032700.1:pep;Derives_from=LTnewLM_340032700.1;orthologous_to=LmjF.34.2690_mRNA;ortholog_cluster=OG0005517;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1103707 1104474 1 + . ID=LTnewLM_340032800 LTnewLM_34 AUGUSTUS mRNA 1103707 1104474 1 + . ID=LTnewLM_340032800.1;Parent=LTnewLM_340032800 LTnewLM_34 AUGUSTUS CDS 1103707 1104474 1 + 0 ID=LTnewLM_340032800.1:CDS:1;Parent=LTnewLM_340032800.1 ### LTnewLM_34 . polypeptide 1103707 1104474 . + . ID=LTnewLM_340032800.1:pep;Derives_from=LTnewLM_340032800.1;orthologous_to=LmjF.34.2700_mRNA;ortholog_cluster=OG0005518;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 1104238 1104411 . + . Parent=LTnewLM_340032800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_34 AUGUSTUS gene 1106233 1107588 1 + . ID=LTnewLM_340032900 LTnewLM_34 AUGUSTUS mRNA 1106233 1107588 1 + . ID=LTnewLM_340032900.1;Parent=LTnewLM_340032900 LTnewLM_34 AUGUSTUS CDS 1106233 1107588 1 + 0 ID=LTnewLM_340032900.1:CDS:1;Parent=LTnewLM_340032900.1 ### LTnewLM_34 . polypeptide 1106233 1107588 . + . ID=LTnewLM_340032900.1:pep;Derives_from=LTnewLM_340032900.1;orthologous_to=LmjF.34.2710_mRNA;ortholog_cluster=OG0005519;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 1109002 1111056 . + . ID=LTnewLM_340033000;coverage=0.999;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.2720_0 LTnewLM_34 Liftoff mRNA 1109002 1111056 . + . ID=LTnewLM_340033000.1;Parent=LTnewLM_340033000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1109002 1111056 . + 0 ID=LTnewLM_340033000.1:CDS:1;Parent=LTnewLM_340033000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1109002 1111056 . + . ID=LTnewLM_340033000.1:pep;Derives_from=LTnewLM_340033000.1;orthologous_to=LmjF.34.2720_mRNA;ortholog_cluster=OG0005520;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_34 Pfam protein_match 1109143 1109643 . + . Parent=LTnewLM_340033000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_34 Pfam protein_match 1110322 1110834 . + . Parent=LTnewLM_340033000.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_34 AUGUSTUS gene 1112275 1114506 1 + . ID=LTnewLM_340033100 LTnewLM_34 AUGUSTUS mRNA 1112275 1114506 1 + . ID=LTnewLM_340033100.1;Parent=LTnewLM_340033100 LTnewLM_34 AUGUSTUS CDS 1112275 1114506 1 + 0 ID=LTnewLM_340033100.1:CDS:1;Parent=LTnewLM_340033100.1 ### LTnewLM_34 . polypeptide 1112275 1114506 . + . ID=LTnewLM_340033100.1:pep;Derives_from=LTnewLM_340033100.1;orthologous_to=LmjF.34.2730_mRNA;ortholog_cluster=OG0005521;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1116962 1117810 1 + . ID=LTnewLM_340033200 LTnewLM_34 AUGUSTUS mRNA 1116962 1117810 1 + . ID=LTnewLM_340033200.1;Parent=LTnewLM_340033200 LTnewLM_34 AUGUSTUS CDS 1116962 1117810 1 + 0 ID=LTnewLM_340033200.1:CDS:1;Parent=LTnewLM_340033200.1 ### LTnewLM_34 . polypeptide 1116962 1117810 . + . ID=LTnewLM_340033200.1:pep;Derives_from=LTnewLM_340033200.1;orthologous_to=LmjF.34.2740_mRNA;ortholog_cluster=OG0005522;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1131866 1133149 1 + . ID=LTnewLM_340033300 LTnewLM_34 AUGUSTUS mRNA 1131866 1133149 1 + . ID=LTnewLM_340033300.1;Parent=LTnewLM_340033300 LTnewLM_34 AUGUSTUS CDS 1131866 1133149 1 + 0 ID=LTnewLM_340033300.1:CDS:1;Parent=LTnewLM_340033300.1 ### LTnewLM_34 . polypeptide 1131866 1133149 . + . ID=LTnewLM_340033300.1:pep;Derives_from=LTnewLM_340033300.1;orthologous_to=LmjF.34.2750_mRNA;ortholog_cluster=OG0005523;product=term%3DMethyltransferase involved in Williams-Beuren syndrome%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12589 LTnewLM_34 Pfam protein_match 1132994 1133134 . + . Parent=LTnewLM_340033300.1:pep;Name=PF12589;signature_desc=Methyltransferase involved in Williams-Beuren syndrome ### LTnewLM_34 AUGUSTUS gene 1134180 1135085 1 + . ID=LTnewLM_340033400 LTnewLM_34 AUGUSTUS mRNA 1134180 1135085 1 + . ID=LTnewLM_340033400.1;Parent=LTnewLM_340033400 LTnewLM_34 AUGUSTUS CDS 1134180 1135085 1 + 0 ID=LTnewLM_340033400.1:CDS:1;Parent=LTnewLM_340033400.1 ### LTnewLM_34 . polypeptide 1134180 1135085 . + . ID=LTnewLM_340033400.1:pep;Derives_from=LTnewLM_340033400.1;orthologous_to=LmjF.34.2760_mRNA;ortholog_cluster=OG0005524;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1137682 1138713 1 + . ID=LTnewLM_340033500 LTnewLM_34 AUGUSTUS mRNA 1137682 1138713 1 + . ID=LTnewLM_340033500.1;Parent=LTnewLM_340033500 LTnewLM_34 AUGUSTUS CDS 1137682 1138713 1 + 0 ID=LTnewLM_340033500.1:CDS:1;Parent=LTnewLM_340033500.1 ### LTnewLM_34 . polypeptide 1137682 1138713 . + . ID=LTnewLM_340033500.1:pep;Derives_from=LTnewLM_340033500.1;orthologous_to=LmjF.34.2765_mRNA;ortholog_cluster=OG0005525;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1142530 1144413 1 + . ID=LTnewLM_340033600 LTnewLM_34 AUGUSTUS mRNA 1142530 1144413 1 + . ID=LTnewLM_340033600.1;Parent=LTnewLM_340033600 LTnewLM_34 AUGUSTUS CDS 1142530 1144413 1 + 0 ID=LTnewLM_340033600.1:CDS:1;Parent=LTnewLM_340033600.1 ### LTnewLM_34 . polypeptide 1142530 1144413 . + . ID=LTnewLM_340033600.1:pep;Derives_from=LTnewLM_340033600.1;orthologous_to=LmjF.34.2770_mRNA;ortholog_cluster=OG0005526;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 1142788 1143249 . + . Parent=LTnewLM_340033600.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 1146693 1147232 1 + . ID=LTnewLM_340033700 LTnewLM_34 AUGUSTUS mRNA 1146693 1147232 1 + . ID=LTnewLM_340033700.1;Parent=LTnewLM_340033700 LTnewLM_34 AUGUSTUS CDS 1146693 1147232 1 + 0 ID=LTnewLM_340033700.1:CDS:1;Parent=LTnewLM_340033700.1 ### LTnewLM_34 . polypeptide 1146693 1147232 . + . ID=LTnewLM_340033700.1:pep;Derives_from=LTnewLM_340033700.1;product=term%3DRibosomal protein S19e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01090;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_34 Pfam protein_match 1146801 1147202 . + . Parent=LTnewLM_340033700.1:pep;Name=PF01090;signature_desc=Ribosomal protein S19e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1148348 1150156 1 + . ID=LTnewLM_340033800 LTnewLM_34 AUGUSTUS mRNA 1148348 1150156 1 + . ID=LTnewLM_340033800.1;Parent=LTnewLM_340033800 LTnewLM_34 AUGUSTUS CDS 1148348 1150156 1 + 0 ID=LTnewLM_340033800.1:CDS:1;Parent=LTnewLM_340033800.1 ### LTnewLM_34 . polypeptide 1148348 1150156 . + . ID=LTnewLM_340033800.1:pep;Derives_from=LTnewLM_340033800.1;orthologous_to=LmjF.34.2790_mRNA;ortholog_cluster=OG0005527;product=term%3DRNA-binding signal recognition particle 68%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16969 LTnewLM_34 Pfam protein_match 1148405 1149787 . + . Parent=LTnewLM_340033800.1:pep;Name=PF16969;signature_desc=RNA-binding signal recognition particle 68 ### LTnewLM_34 AUGUSTUS gene 1152161 1153096 0.49 + . ID=LTnewLM_340033900 LTnewLM_34 AUGUSTUS mRNA 1152161 1153096 0.49 + . ID=LTnewLM_340033900.1;Parent=LTnewLM_340033900 LTnewLM_34 AUGUSTUS CDS 1152161 1152450 0.83 + 0 ID=LTnewLM_340033900.1:CDS:1;Parent=LTnewLM_340033900.1 LTnewLM_34 AUGUSTUS CDS 1152586 1153096 0.53 + 1 ID=LTnewLM_340033900.1:CDS:2;Parent=LTnewLM_340033900.1 ### LTnewLM_34 . polypeptide 1152161 1153096 . + . ID=LTnewLM_340033900.1:pep;Derives_from=LTnewLM_340033900.1;orthologous_to=LTnewLM_080012100.1,LTnewLM_290036300.1,LTnewLM_310010200.1,LTnewLM_310010600.1,LTnewLM_340010700.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 1154249 1156141 . + . ID=LTnewLM_340034000;coverage=1.0;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.2800_0 LTnewLM_34 Liftoff mRNA 1154249 1156141 . + . ID=LTnewLM_340034000.1;Parent=LTnewLM_340034000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1154249 1156141 . + 0 ID=LTnewLM_340034000.1:CDS:1;Parent=LTnewLM_340034000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1154249 1156141 . + . ID=LTnewLM_340034000.1:pep;Derives_from=LTnewLM_340034000.1;orthologous_to=LTnewLM_080012200.1,LTnewLM_080012300.1,LTnewLM_290020200.1,LmjF.08.0790_mRNA,LmjF.34.2800_mRNA;ortholog_cluster=OG0000062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1157248 1162364 0.9 + . ID=LTnewLM_340034100 LTnewLM_34 AUGUSTUS mRNA 1157248 1162364 0.9 + . ID=LTnewLM_340034100.1;Parent=LTnewLM_340034100 LTnewLM_34 AUGUSTUS CDS 1157248 1157927 0.95 + 0 ID=LTnewLM_340034100.1:CDS:1;Parent=LTnewLM_340034100.1 LTnewLM_34 AUGUSTUS CDS 1161719 1162364 0.9 + 1 ID=LTnewLM_340034100.1:CDS:2;Parent=LTnewLM_340034100.1 ### LTnewLM_34 . polypeptide 1157248 1162364 . + . ID=LTnewLM_340034100.1:pep;Derives_from=LTnewLM_340034100.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 1157290 1157754 . + . Parent=LTnewLM_340034100.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 1163461 1164049 0.6 + . ID=LTnewLM_340034200 LTnewLM_34 AUGUSTUS mRNA 1163461 1164049 0.6 + . ID=LTnewLM_340034200.1;Parent=LTnewLM_340034200 LTnewLM_34 AUGUSTUS CDS 1163461 1163829 0.6 + 0 ID=LTnewLM_340034200.1:CDS:1;Parent=LTnewLM_340034200.1 LTnewLM_34 AUGUSTUS CDS 1163873 1164049 0.69 + 0 ID=LTnewLM_340034200.1:CDS:2;Parent=LTnewLM_340034200.1 ### LTnewLM_34 . polypeptide 1163461 1164049 . + . ID=LTnewLM_340034200.1:pep;Derives_from=LTnewLM_340034200.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_34 Pfam protein_match 1163503 1163934 . + . Parent=LTnewLM_340034200.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_34 AUGUSTUS gene 1170184 1172841 1 + . ID=LTnewLM_340034300 LTnewLM_34 AUGUSTUS mRNA 1170184 1172841 1 + . ID=LTnewLM_340034300.1;Parent=LTnewLM_340034300 LTnewLM_34 AUGUSTUS CDS 1170184 1172841 1 + 0 ID=LTnewLM_340034300.1:CDS:1;Parent=LTnewLM_340034300.1 ### LTnewLM_34 . polypeptide 1170184 1172841 . + . ID=LTnewLM_340034300.1:pep;Derives_from=LTnewLM_340034300.1;orthologous_to=LmjF.34.2810_mRNA;ortholog_cluster=OG0005528;product=term%3DCytosolic carboxypeptidase N-terminal domain/Zinc carboxypeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18027|Pfam:PF00246;Ontology_term=GO:0006508,GO:0008270,GO:0004181 LTnewLM_34 Pfam protein_match 1170496 1170729 . + . Parent=LTnewLM_340034300.1:pep;Name=PF18027;signature_desc=Cytosolic carboxypeptidase N-terminal domain LTnewLM_34 Pfam protein_match 1171405 1171884 . + . Parent=LTnewLM_340034300.1:pep;Name=PF00246;signature_desc=Zinc carboxypeptidase;Ontology_term=GO:0004181,GO:0008270,GO:0006508 ### LTnewLM_34 AUGUSTUS gene 1175237 1177180 1 + . ID=LTnewLM_340034400 LTnewLM_34 AUGUSTUS mRNA 1175237 1177180 1 + . ID=LTnewLM_340034400.1;Parent=LTnewLM_340034400 LTnewLM_34 AUGUSTUS CDS 1175237 1177180 1 + 0 ID=LTnewLM_340034400.1:CDS:1;Parent=LTnewLM_340034400.1 ### LTnewLM_34 . polypeptide 1175237 1177180 . + . ID=LTnewLM_340034400.1:pep;Derives_from=LTnewLM_340034400.1;orthologous_to=LmjF.34.2820_mRNA;ortholog_cluster=OG0005529;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_34 Pfam protein_match 1176386 1176622 . + . Parent=LTnewLM_340034400.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_34 Pfam protein_match 1176755 1177000 . + . Parent=LTnewLM_340034400.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_34 AUGUSTUS gene 1180634 1180945 1 + . ID=LTnewLM_340034500 LTnewLM_34 AUGUSTUS mRNA 1180634 1180945 1 + . ID=LTnewLM_340034500.1;Parent=LTnewLM_340034500 LTnewLM_34 AUGUSTUS CDS 1180634 1180945 1 + 0 ID=LTnewLM_340034500.1:CDS:1;Parent=LTnewLM_340034500.1 ### LTnewLM_34 . polypeptide 1180634 1180945 . + . ID=LTnewLM_340034500.1:pep;Derives_from=LTnewLM_340034500.1;orthologous_to=LmjF.34.2830_mRNA;ortholog_cluster=OG0005530;product=term%3DUrm1 (Ubiquitin related modifier)/ThiS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09138|Pfam:PF02597;Ontology_term=GO:0005737,GO:0034227 LTnewLM_34 Pfam protein_match 1180652 1180939 . + . Parent=LTnewLM_340034500.1:pep;Name=PF09138;signature_desc=Urm1 (Ubiquitin related modifier);Ontology_term=GO:0034227,GO:0005737 LTnewLM_34 Pfam protein_match 1180703 1180939 . + . Parent=LTnewLM_340034500.1:pep;Name=PF02597;signature_desc=ThiS family ### LTnewLM_34 AUGUSTUS gene 1181548 1183584 1 + . ID=LTnewLM_340034600 LTnewLM_34 AUGUSTUS mRNA 1181548 1183584 1 + . ID=LTnewLM_340034600.1;Parent=LTnewLM_340034600 LTnewLM_34 AUGUSTUS CDS 1181548 1183584 1 + 0 ID=LTnewLM_340034600.1:CDS:1;Parent=LTnewLM_340034600.1 ### LTnewLM_34 . polypeptide 1181548 1183584 . + . ID=LTnewLM_340034600.1:pep;Derives_from=LTnewLM_340034600.1;orthologous_to=LmjF.34.2840_mRNA;ortholog_cluster=OG0005531;product=term%3DElongation factor Tu GTP binding domain/50S ribosome-binding GTPase/Elongation factor Tu domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF01926|Pfam:PF03144;Ontology_term=GO:0003924,GO:0005525 LTnewLM_34 Pfam protein_match 1181557 1182159 . + . Parent=LTnewLM_340034600.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_34 Pfam protein_match 1181560 1181952 . + . Parent=LTnewLM_340034600.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_34 Pfam protein_match 1182256 1182414 . + . Parent=LTnewLM_340034600.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 ### LTnewLM_34 AUGUSTUS gene 1185023 1186258 1 + . ID=LTnewLM_340034700 LTnewLM_34 AUGUSTUS mRNA 1185023 1186258 1 + . ID=LTnewLM_340034700.1;Parent=LTnewLM_340034700 LTnewLM_34 AUGUSTUS CDS 1185023 1186258 1 + 0 ID=LTnewLM_340034700.1:CDS:1;Parent=LTnewLM_340034700.1 ### LTnewLM_34 . polypeptide 1185023 1186258 . + . ID=LTnewLM_340034700.1:pep;Derives_from=LTnewLM_340034700.1;orthologous_to=LmjF.34.2850_mRNA;ortholog_cluster=OG0005532;product=term%3DBacterial transferase hexapeptide (six repeats)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00132 LTnewLM_34 Pfam protein_match 1186055 1186153 . + . Parent=LTnewLM_340034700.1:pep;Name=PF00132;signature_desc=Bacterial transferase hexapeptide (six repeats) ### LTnewLM_34 AUGUSTUS gene 1187998 1188354 1 + . ID=LTnewLM_340034800 LTnewLM_34 AUGUSTUS mRNA 1187998 1188354 1 + . ID=LTnewLM_340034800.1;Parent=LTnewLM_340034800 LTnewLM_34 AUGUSTUS CDS 1187998 1188354 1 + 0 ID=LTnewLM_340034800.1:CDS:1;Parent=LTnewLM_340034800.1 ### LTnewLM_34 . polypeptide 1187998 1188354 . + . ID=LTnewLM_340034800.1:pep;Derives_from=LTnewLM_340034800.1;orthologous_to=LmjF.34.2860_mRNA;ortholog_cluster=OG0005533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 1189145 1190406 . + . ID=LTnewLM_340034900:pseudogene;coverage=1.0;sequence_ID=0.985;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.2900_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1189145 1190406 . + . ID=LTnewLM_340034900.1;Parent=LTnewLM_340034900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1189145 1190406 . + . ID=LTnewLM_340034900.1:pseudogenic_exon:1;Parent=LTnewLM_340034900.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1189145 1190406 . + . ID=LTnewLM_340034900.1:pep;Derives_from=LTnewLM_340034900.1;orthologous_to=LTnewLM_320039300.1,LTnewLM_340035000.1,LmjF.32.3130_mRNA,LmjF.34.2870_mRNA,LmjF.34.2880_mRNA,LmjF.34.2890_mRNA,LmjF.34.2900_mRNA;ortholog_cluster=OG0000033;product=term%3DRibosomal protein L3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00297;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_34 Pfam protein_match 1189145 1189957 . + . Parent=LTnewLM_340034900.1:pep;Name=PF00297;signature_desc=Ribosomal protein L3;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1191277 1192536 1 + . ID=LTnewLM_340035000 LTnewLM_34 AUGUSTUS mRNA 1191277 1192536 1 + . ID=LTnewLM_340035000.1;Parent=LTnewLM_340035000 LTnewLM_34 AUGUSTUS CDS 1191277 1192536 1 + 0 ID=LTnewLM_340035000.1:CDS:1;Parent=LTnewLM_340035000.1 ### LTnewLM_34 . polypeptide 1191277 1192536 . + . ID=LTnewLM_340035000.1:pep;Derives_from=LTnewLM_340035000.1;orthologous_to=LTnewLM_320039300.1,LTnewLM_340034900.1,LmjF.32.3130_mRNA,LmjF.34.2870_mRNA,LmjF.34.2880_mRNA,LmjF.34.2890_mRNA,LmjF.34.2900_mRNA;ortholog_cluster=OG0000033;product=term%3DRibosomal protein L3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00297;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_34 Pfam protein_match 1191277 1192392 . + . Parent=LTnewLM_340035000.1:pep;Name=PF00297;signature_desc=Ribosomal protein L3;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1194543 1195841 1 + . ID=LTnewLM_340035100 LTnewLM_34 AUGUSTUS mRNA 1194543 1195841 1 + . ID=LTnewLM_340035100.1;Parent=LTnewLM_340035100 LTnewLM_34 AUGUSTUS CDS 1194543 1195841 1 + 0 ID=LTnewLM_340035100.1:CDS:1;Parent=LTnewLM_340035100.1 ### LTnewLM_34 . polypeptide 1194543 1195841 . + . ID=LTnewLM_340035100.1:pep;Derives_from=LTnewLM_340035100.1;orthologous_to=LmjF.34.2910_mRNA;ortholog_cluster=OG0005534;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1201847 1202116 1 + . ID=LTnewLM_340035200 LTnewLM_34 AUGUSTUS mRNA 1201847 1202116 1 + . ID=LTnewLM_340035200.1;Parent=LTnewLM_340035200 LTnewLM_34 AUGUSTUS CDS 1201847 1202116 1 + 0 ID=LTnewLM_340035200.1:CDS:1;Parent=LTnewLM_340035200.1 ### LTnewLM_34 . polypeptide 1201847 1202116 . + . ID=LTnewLM_340035200.1:pep;Derives_from=LTnewLM_340035200.1;orthologous_to=LmjF.34.2920_mRNA;ortholog_cluster=OG0005535;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1202927 1203499 1 + . ID=LTnewLM_340035300 LTnewLM_34 AUGUSTUS mRNA 1202927 1203499 1 + . ID=LTnewLM_340035300.1;Parent=LTnewLM_340035300 LTnewLM_34 AUGUSTUS CDS 1202927 1203499 1 + 0 ID=LTnewLM_340035300.1:CDS:1;Parent=LTnewLM_340035300.1 ### LTnewLM_34 . polypeptide 1202927 1203499 . + . ID=LTnewLM_340035300.1:pep;Derives_from=LTnewLM_340035300.1;orthologous_to=LmjF.34.2930_mRNA;ortholog_cluster=OG0005536;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1206471 1206680 1 + . ID=LTnewLM_340035400 LTnewLM_34 AUGUSTUS mRNA 1206471 1206680 1 + . ID=LTnewLM_340035400.1;Parent=LTnewLM_340035400 LTnewLM_34 AUGUSTUS CDS 1206471 1206680 1 + 0 ID=LTnewLM_340035400.1:CDS:1;Parent=LTnewLM_340035400.1 ### LTnewLM_34 . polypeptide 1206471 1206680 . + . ID=LTnewLM_340035400.1:pep;Derives_from=LTnewLM_340035400.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 1207400 1208320 1 + . ID=LTnewLM_340035500 LTnewLM_34 AUGUSTUS mRNA 1207400 1208320 1 + . ID=LTnewLM_340035500.1;Parent=LTnewLM_340035500 LTnewLM_34 AUGUSTUS CDS 1207400 1208320 1 + 0 ID=LTnewLM_340035500.1:CDS:1;Parent=LTnewLM_340035500.1 ### LTnewLM_34 . polypeptide 1207400 1208320 . + . ID=LTnewLM_340035500.1:pep;Derives_from=LTnewLM_340035500.1;orthologous_to=LmjF.34.2940_mRNA;ortholog_cluster=OG0005537;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1209148 1210416 1 + . ID=LTnewLM_340035600 LTnewLM_34 AUGUSTUS mRNA 1209148 1210416 1 + . ID=LTnewLM_340035600.1;Parent=LTnewLM_340035600 LTnewLM_34 AUGUSTUS CDS 1209148 1210416 1 + 0 ID=LTnewLM_340035600.1:CDS:1;Parent=LTnewLM_340035600.1 ### LTnewLM_34 . polypeptide 1209148 1210416 . + . ID=LTnewLM_340035600.1:pep;Derives_from=LTnewLM_340035600.1;orthologous_to=LmjF.34.2950_mRNA;ortholog_cluster=OG0005538;product=term%3DEF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13202;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 1209295 1209432 . + . Parent=LTnewLM_340035600.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_34 Pfam protein_match 1209370 1209432 . + . Parent=LTnewLM_340035600.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_34 Pfam protein_match 1210054 1210095 . + . Parent=LTnewLM_340035600.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_34 AUGUSTUS gene 1211235 1211927 1 + . ID=LTnewLM_340035700 LTnewLM_34 AUGUSTUS mRNA 1211235 1211927 1 + . ID=LTnewLM_340035700.1;Parent=LTnewLM_340035700 LTnewLM_34 AUGUSTUS CDS 1211235 1211927 1 + 0 ID=LTnewLM_340035700.1:CDS:1;Parent=LTnewLM_340035700.1 ### LTnewLM_34 . polypeptide 1211235 1211927 . + . ID=LTnewLM_340035700.1:pep;Derives_from=LTnewLM_340035700.1;orthologous_to=LmjF.34.2960_mRNA;ortholog_cluster=OG0005539;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1212732 1213280 1 + . ID=LTnewLM_340035800 LTnewLM_34 AUGUSTUS mRNA 1212732 1213280 1 + . ID=LTnewLM_340035800.1;Parent=LTnewLM_340035800 LTnewLM_34 AUGUSTUS CDS 1212732 1213280 1 + 0 ID=LTnewLM_340035800.1:CDS:1;Parent=LTnewLM_340035800.1 ### LTnewLM_34 . polypeptide 1212732 1213280 . + . ID=LTnewLM_340035800.1:pep;Derives_from=LTnewLM_340035800.1;orthologous_to=LmjF.34.2970_mRNA;ortholog_cluster=OG0005540;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1214388 1215419 1 + . ID=LTnewLM_340035900 LTnewLM_34 AUGUSTUS mRNA 1214388 1215419 1 + . ID=LTnewLM_340035900.1;Parent=LTnewLM_340035900 LTnewLM_34 AUGUSTUS CDS 1214388 1215419 1 + 0 ID=LTnewLM_340035900.1:CDS:1;Parent=LTnewLM_340035900.1 ### LTnewLM_34 . polypeptide 1214388 1215419 . + . ID=LTnewLM_340035900.1:pep;Derives_from=LTnewLM_340035900.1;orthologous_to=LmjF.34.2980_mRNA;ortholog_cluster=OG0005541;product=term%3DNucleoside diphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00334;Ontology_term=GO:0006241,GO:0005524,GO:0006183,GO:0006165,GO:0004550,GO:0006228 LTnewLM_34 Pfam protein_match 1215003 1215410 . + . Parent=LTnewLM_340035900.1:pep;Name=PF00334;signature_desc=Nucleoside diphosphate kinase;Ontology_term=GO:0004550,GO:0005524,GO:0006165,GO:0006183,GO:0006228,GO:0006241 ### LTnewLM_34 AUGUSTUS gene 1217249 1218505 1 + . ID=LTnewLM_340036000 LTnewLM_34 AUGUSTUS mRNA 1217249 1218505 1 + . ID=LTnewLM_340036000.1;Parent=LTnewLM_340036000 LTnewLM_34 AUGUSTUS CDS 1217249 1218505 1 + 0 ID=LTnewLM_340036000.1:CDS:1;Parent=LTnewLM_340036000.1 ### LTnewLM_34 . polypeptide 1217249 1218505 . + . ID=LTnewLM_340036000.1:pep;Derives_from=LTnewLM_340036000.1;orthologous_to=LmjF.34.2990_mRNA;ortholog_cluster=OG0005542;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1220471 1222357 1 + . ID=LTnewLM_340036100 LTnewLM_34 AUGUSTUS mRNA 1220471 1222357 1 + . ID=LTnewLM_340036100.1;Parent=LTnewLM_340036100 LTnewLM_34 AUGUSTUS CDS 1220471 1222357 1 + 0 ID=LTnewLM_340036100.1:CDS:1;Parent=LTnewLM_340036100.1 ### LTnewLM_34 . polypeptide 1220471 1222357 . + . ID=LTnewLM_340036100.1:pep;Derives_from=LTnewLM_340036100.1;orthologous_to=LmjF.34.3000_mRNA;ortholog_cluster=OG0005543;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1223477 1224226 1 + . ID=LTnewLM_340036200 LTnewLM_34 AUGUSTUS mRNA 1223477 1224226 1 + . ID=LTnewLM_340036200.1;Parent=LTnewLM_340036200 LTnewLM_34 AUGUSTUS CDS 1223477 1224226 1 + 0 ID=LTnewLM_340036200.1:CDS:1;Parent=LTnewLM_340036200.1 ### LTnewLM_34 . polypeptide 1223477 1224226 . + . ID=LTnewLM_340036200.1:pep;Derives_from=LTnewLM_340036200.1;orthologous_to=LmjF.34.3010_mRNA;ortholog_cluster=OG0005544;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_34 Pfam protein_match 1223777 1224043 . + . Parent=LTnewLM_340036200.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_34 AUGUSTUS gene 1227095 1229920 1 + . ID=LTnewLM_340036300 LTnewLM_34 AUGUSTUS mRNA 1227095 1229920 1 + . ID=LTnewLM_340036300.1;Parent=LTnewLM_340036300 LTnewLM_34 AUGUSTUS CDS 1227095 1229920 1 + 0 ID=LTnewLM_340036300.1:CDS:1;Parent=LTnewLM_340036300.1 ### LTnewLM_34 . polypeptide 1227095 1229920 . + . ID=LTnewLM_340036300.1:pep;Derives_from=LTnewLM_340036300.1;orthologous_to=LmjF.34.3020_mRNA;ortholog_cluster=OG0005545;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_34 Pfam protein_match 1228181 1228735 . + . Parent=LTnewLM_340036300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_34 AUGUSTUS gene 1232810 1233862 1 + . ID=LTnewLM_340036400 LTnewLM_34 AUGUSTUS mRNA 1232810 1233862 1 + . ID=LTnewLM_340036400.1;Parent=LTnewLM_340036400 LTnewLM_34 AUGUSTUS CDS 1232810 1233862 1 + 0 ID=LTnewLM_340036400.1:CDS:1;Parent=LTnewLM_340036400.1 ### LTnewLM_34 . polypeptide 1232810 1233862 . + . ID=LTnewLM_340036400.1:pep;Derives_from=LTnewLM_340036400.1;orthologous_to=LmjF.34.3030_mRNA;ortholog_cluster=OG0005546;product=term%3DRetinal Maintenance%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14996 LTnewLM_34 Pfam protein_match 1233344 1233715 . + . Parent=LTnewLM_340036400.1:pep;Name=PF14996;signature_desc=Retinal Maintenance ### LTnewLM_34 AUGUSTUS gene 1234883 1236682 1 + . ID=LTnewLM_340036500 LTnewLM_34 AUGUSTUS mRNA 1234883 1236682 1 + . ID=LTnewLM_340036500.1;Parent=LTnewLM_340036500 LTnewLM_34 AUGUSTUS CDS 1234883 1236682 1 + 0 ID=LTnewLM_340036500.1:CDS:1;Parent=LTnewLM_340036500.1 ### LTnewLM_34 . polypeptide 1234883 1236682 . + . ID=LTnewLM_340036500.1:pep;Derives_from=LTnewLM_340036500.1;orthologous_to=LmjF.34.3040_mRNA;ortholog_cluster=OG0005547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1237935 1238471 1 + . ID=LTnewLM_340036600 LTnewLM_34 AUGUSTUS mRNA 1237935 1238471 1 + . ID=LTnewLM_340036600.1;Parent=LTnewLM_340036600 LTnewLM_34 AUGUSTUS CDS 1237935 1238471 1 + 0 ID=LTnewLM_340036600.1:CDS:1;Parent=LTnewLM_340036600.1 ### LTnewLM_34 . polypeptide 1237935 1238471 . + . ID=LTnewLM_340036600.1:pep;Derives_from=LTnewLM_340036600.1;orthologous_to=LmjF.34.3050_mRNA;ortholog_cluster=OG0005548;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_34 Pfam protein_match 1238160 1238396 . + . Parent=LTnewLM_340036600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_34 AUGUSTUS gene 1241870 1243429 1 + . ID=LTnewLM_340036700 LTnewLM_34 AUGUSTUS mRNA 1241870 1243429 1 + . ID=LTnewLM_340036700.1;Parent=LTnewLM_340036700 LTnewLM_34 AUGUSTUS CDS 1241870 1243429 1 + 0 ID=LTnewLM_340036700.1:CDS:1;Parent=LTnewLM_340036700.1 ### LTnewLM_34 . polypeptide 1241870 1243429 . + . ID=LTnewLM_340036700.1:pep;Derives_from=LTnewLM_340036700.1;orthologous_to=LmjF.34.3060_mRNA;ortholog_cluster=OG0005549;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_34 Pfam protein_match 1242107 1242466 . + . Parent=LTnewLM_340036700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_34 Pfam protein_match 1242839 1243093 . + . Parent=LTnewLM_340036700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_34 Pfam protein_match 1243154 1243417 . + . Parent=LTnewLM_340036700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_34 AUGUSTUS gene 1246271 1248181 1 + . ID=LTnewLM_340036800 LTnewLM_34 AUGUSTUS mRNA 1246271 1248181 1 + . ID=LTnewLM_340036800.1;Parent=LTnewLM_340036800 LTnewLM_34 AUGUSTUS CDS 1246271 1248181 1 + 0 ID=LTnewLM_340036800.1:CDS:1;Parent=LTnewLM_340036800.1 ### LTnewLM_34 . polypeptide 1246271 1248181 . + . ID=LTnewLM_340036800.1:pep;Derives_from=LTnewLM_340036800.1;orthologous_to=LTnewLM_310014700.1,LmjF.31.0810_mRNA;ortholog_cluster=OG0000435;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1253711 1255942 1 + . ID=LTnewLM_340036900 LTnewLM_34 AUGUSTUS mRNA 1253711 1255942 1 + . ID=LTnewLM_340036900.1;Parent=LTnewLM_340036900 LTnewLM_34 AUGUSTUS CDS 1253711 1255942 1 + 0 ID=LTnewLM_340036900.1:CDS:1;Parent=LTnewLM_340036900.1 ### LTnewLM_34 . polypeptide 1253711 1255942 . + . ID=LTnewLM_340036900.1:pep;Derives_from=LTnewLM_340036900.1;orthologous_to=LmjF.34.3080_mRNA;ortholog_cluster=OG0005550;product=term%3DPMC2NT (NUC016) domain/3'-5' exonuclease/HRDC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08066|Pfam:PF01612|Pfam:PF00570;Ontology_term=GO:0006139,GO:0000176,GO:0006396,GO:0005622,GO:0003676,GO:0008408 LTnewLM_34 Pfam protein_match 1253786 1254064 . + . Parent=LTnewLM_340036900.1:pep;Name=PF08066;signature_desc=PMC2NT (NUC016) domain;Ontology_term=GO:0006396,GO:0000176 LTnewLM_34 Pfam protein_match 1254413 1254901 . + . Parent=LTnewLM_340036900.1:pep;Name=PF01612;signature_desc=3'-5' exonuclease;Ontology_term=GO:0003676,GO:0008408,GO:0006139 LTnewLM_34 Pfam protein_match 1255067 1255264 . + . Parent=LTnewLM_340036900.1:pep;Name=PF00570;signature_desc=HRDC domain;Ontology_term=GO:0003676,GO:0005622 ### LTnewLM_34 AUGUSTUS gene 1257577 1259217 1 + . ID=LTnewLM_340037000 LTnewLM_34 AUGUSTUS mRNA 1257577 1259217 1 + . ID=LTnewLM_340037000.1;Parent=LTnewLM_340037000 LTnewLM_34 AUGUSTUS CDS 1257577 1259217 1 + 0 ID=LTnewLM_340037000.1:CDS:1;Parent=LTnewLM_340037000.1 ### LTnewLM_34 . polypeptide 1257577 1259217 . + . ID=LTnewLM_340037000.1:pep;Derives_from=LTnewLM_340037000.1;orthologous_to=LmjF.34.3090_mRNA;ortholog_cluster=OG0005551;product=term%3DPhosphatidylinositol-4-phosphate 5-Kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01504;Ontology_term=GO:0046488,GO:0016307 LTnewLM_34 Pfam protein_match 1258321 1259205 . + . Parent=LTnewLM_340037000.1:pep;Name=PF01504;signature_desc=Phosphatidylinositol-4-phosphate 5-Kinase;Ontology_term=GO:0016307,GO:0046488 ### LTnewLM_34 AUGUSTUS gene 1260657 1261850 1 + . ID=LTnewLM_340037100 LTnewLM_34 AUGUSTUS mRNA 1260657 1261850 1 + . ID=LTnewLM_340037100.1;Parent=LTnewLM_340037100 LTnewLM_34 AUGUSTUS CDS 1260657 1261850 1 + 0 ID=LTnewLM_340037100.1:CDS:1;Parent=LTnewLM_340037100.1 ### LTnewLM_34 . polypeptide 1260657 1261850 . + . ID=LTnewLM_340037100.1:pep;Derives_from=LTnewLM_340037100.1;orthologous_to=LmjF.34.3100_mRNA;ortholog_cluster=OG0005552;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1263043 1263771 0.88 + . ID=LTnewLM_340037200 LTnewLM_34 AUGUSTUS mRNA 1263043 1263771 0.88 + . ID=LTnewLM_340037200.1;Parent=LTnewLM_340037200 LTnewLM_34 AUGUSTUS CDS 1263043 1263771 0.88 + 0 ID=LTnewLM_340037200.1:CDS:1;Parent=LTnewLM_340037200.1 ### LTnewLM_34 . polypeptide 1263043 1263771 . + . ID=LTnewLM_340037200.1:pep;Derives_from=LTnewLM_340037200.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_360013100.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1264995 1265768 1 + . ID=LTnewLM_340037300 LTnewLM_34 AUGUSTUS mRNA 1264995 1265768 1 + . ID=LTnewLM_340037300.1;Parent=LTnewLM_340037300 LTnewLM_34 AUGUSTUS CDS 1264995 1265768 1 + 0 ID=LTnewLM_340037300.1:CDS:1;Parent=LTnewLM_340037300.1 ### LTnewLM_34 . polypeptide 1264995 1265768 . + . ID=LTnewLM_340037300.1:pep;Derives_from=LTnewLM_340037300.1;orthologous_to=LmjF.34.3110_mRNA;ortholog_cluster=OG0005553;product=term%3DAAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13671 LTnewLM_34 Pfam protein_match 1265304 1265711 . + . Parent=LTnewLM_340037300.1:pep;Name=PF13671;signature_desc=AAA domain ### LTnewLM_34 AUGUSTUS gene 1267580 1268605 1 + . ID=LTnewLM_340037400 LTnewLM_34 AUGUSTUS mRNA 1267580 1268605 1 + . ID=LTnewLM_340037400.1;Parent=LTnewLM_340037400 LTnewLM_34 AUGUSTUS CDS 1267580 1268605 1 + 0 ID=LTnewLM_340037400.1:CDS:1;Parent=LTnewLM_340037400.1 ### LTnewLM_34 . polypeptide 1267580 1268605 . + . ID=LTnewLM_340037400.1:pep;Derives_from=LTnewLM_340037400.1;orthologous_to=LmjF.34.3120_mRNA;ortholog_cluster=OG0005554;product=term%3DTriose-phosphate Transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03151 LTnewLM_34 Pfam protein_match 1267607 1268458 . + . Parent=LTnewLM_340037400.1:pep;Name=PF03151;signature_desc=Triose-phosphate Transporter family ### LTnewLM_34 AUGUSTUS gene 1270475 1270708 1 + . ID=LTnewLM_340037500 LTnewLM_34 AUGUSTUS mRNA 1270475 1270708 1 + . ID=LTnewLM_340037500.1;Parent=LTnewLM_340037500 LTnewLM_34 AUGUSTUS CDS 1270475 1270708 1 + 0 ID=LTnewLM_340037500.1:CDS:1;Parent=LTnewLM_340037500.1 ### LTnewLM_34 . polypeptide 1270475 1270708 . + . ID=LTnewLM_340037500.1:pep;Derives_from=LTnewLM_340037500.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 1272364 1273668 1 + . ID=LTnewLM_340037600 LTnewLM_34 AUGUSTUS mRNA 1272364 1273668 1 + . ID=LTnewLM_340037600.1;Parent=LTnewLM_340037600 LTnewLM_34 AUGUSTUS CDS 1272364 1273668 1 + 0 ID=LTnewLM_340037600.1:CDS:1;Parent=LTnewLM_340037600.1 ### LTnewLM_34 . polypeptide 1272364 1273668 . + . ID=LTnewLM_340037600.1:pep;Derives_from=LTnewLM_340037600.1;orthologous_to=LmjF.34.3130_mRNA;ortholog_cluster=OG0005555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1274536 1275300 1 + . ID=LTnewLM_340037700 LTnewLM_34 AUGUSTUS mRNA 1274536 1275300 1 + . ID=LTnewLM_340037700.1;Parent=LTnewLM_340037700 LTnewLM_34 AUGUSTUS CDS 1274536 1275300 1 + 0 ID=LTnewLM_340037700.1:CDS:1;Parent=LTnewLM_340037700.1 ### LTnewLM_34 . polypeptide 1274536 1275300 . + . ID=LTnewLM_340037700.1:pep;Derives_from=LTnewLM_340037700.1;orthologous_to=LmjF.34.3140_mRNA;ortholog_cluster=OG0005556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1276421 1277698 1 + . ID=LTnewLM_340037800 LTnewLM_34 AUGUSTUS mRNA 1276421 1277698 1 + . ID=LTnewLM_340037800.1;Parent=LTnewLM_340037800 LTnewLM_34 AUGUSTUS CDS 1276421 1277698 1 + 0 ID=LTnewLM_340037800.1:CDS:1;Parent=LTnewLM_340037800.1 ### LTnewLM_34 . polypeptide 1276421 1277698 . + . ID=LTnewLM_340037800.1:pep;Derives_from=LTnewLM_340037800.1;orthologous_to=LmjF.34.3150_mRNA;ortholog_cluster=OG0005557;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1278796 1280562 1 + . ID=LTnewLM_340037900 LTnewLM_34 AUGUSTUS mRNA 1278796 1280562 1 + . ID=LTnewLM_340037900.1;Parent=LTnewLM_340037900 LTnewLM_34 AUGUSTUS CDS 1278796 1280562 1 + 0 ID=LTnewLM_340037900.1:CDS:1;Parent=LTnewLM_340037900.1 ### LTnewLM_34 . polypeptide 1278796 1280562 . + . ID=LTnewLM_340037900.1:pep;Derives_from=LTnewLM_340037900.1;orthologous_to=LmjF.34.3160_mRNA;ortholog_cluster=OG0005558;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1282272 1283978 1 + . ID=LTnewLM_340038000 LTnewLM_34 AUGUSTUS mRNA 1282272 1283978 1 + . ID=LTnewLM_340038000.1;Parent=LTnewLM_340038000 LTnewLM_34 AUGUSTUS CDS 1282272 1283978 1 + 0 ID=LTnewLM_340038000.1:CDS:1;Parent=LTnewLM_340038000.1 ### LTnewLM_34 . polypeptide 1282272 1283978 . + . ID=LTnewLM_340038000.1:pep;Derives_from=LTnewLM_340038000.1;orthologous_to=LmjF.34.3170_mRNA;ortholog_cluster=OG0005559;product=term%3DTir chaperone protein (CesT) family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05932;Ontology_term=GO:0009405,GO:0005737,GO:0050708 LTnewLM_34 Pfam protein_match 1283634 1283942 . + . Parent=LTnewLM_340038000.1:pep;Name=PF05932;signature_desc=Tir chaperone protein (CesT) family;Ontology_term=GO:0009405,GO:0050708,GO:0005737 ### LTnewLM_34 AUGUSTUS gene 1285054 1286913 1 + . ID=LTnewLM_340038100 LTnewLM_34 AUGUSTUS mRNA 1285054 1286913 1 + . ID=LTnewLM_340038100.1;Parent=LTnewLM_340038100 LTnewLM_34 AUGUSTUS CDS 1285054 1286913 1 + 0 ID=LTnewLM_340038100.1:CDS:1;Parent=LTnewLM_340038100.1 ### LTnewLM_34 . polypeptide 1285054 1286913 . + . ID=LTnewLM_340038100.1:pep;Derives_from=LTnewLM_340038100.1;orthologous_to=LmjF.34.3180_mRNA;ortholog_cluster=OG0005560;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1289581 1291113 1 + . ID=LTnewLM_340038200 LTnewLM_34 AUGUSTUS mRNA 1289581 1291113 1 + . ID=LTnewLM_340038200.1;Parent=LTnewLM_340038200 LTnewLM_34 AUGUSTUS CDS 1289581 1291113 1 + 0 ID=LTnewLM_340038200.1:CDS:1;Parent=LTnewLM_340038200.1 ### LTnewLM_34 . polypeptide 1289581 1291113 . + . ID=LTnewLM_340038200.1:pep;Derives_from=LTnewLM_340038200.1;orthologous_to=LmjF.34.3190_mRNA;ortholog_cluster=OG0005561;product=term%3DNmrA-like family/NAD dependent epimerase/dehydratase family/3-beta hydroxysteroid dehydrogenase/isomerase family/NAD(P)H-binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05368|Pfam:PF01370|Pfam:PF01073|Pfam:PF13460;Ontology_term=GO:0003824,GO:0003854,GO:0050662,GO:0055114,GO:0016616,GO:0006694 LTnewLM_34 Pfam protein_match 1289926 1290153 . + . Parent=LTnewLM_340038200.1:pep;Name=PF05368;signature_desc=NmrA-like family LTnewLM_34 Pfam protein_match 1289926 1290645 . + . Parent=LTnewLM_340038200.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_34 Pfam protein_match 1289929 1290174 . + . Parent=LTnewLM_340038200.1:pep;Name=PF01073;signature_desc=3-beta hydroxysteroid dehydrogenase/isomerase family;Ontology_term=GO:0003854,GO:0016616,GO:0006694,GO:0055114 LTnewLM_34 Pfam protein_match 1289944 1290291 . + . Parent=LTnewLM_340038200.1:pep;Name=PF13460;signature_desc=NAD(P)H-binding ### LTnewLM_34 AUGUSTUS gene 1296609 1299812 1 + . ID=LTnewLM_340038300 LTnewLM_34 AUGUSTUS mRNA 1296609 1299812 1 + . ID=LTnewLM_340038300.1;Parent=LTnewLM_340038300 LTnewLM_34 AUGUSTUS CDS 1296609 1299812 1 + 0 ID=LTnewLM_340038300.1:CDS:1;Parent=LTnewLM_340038300.1 ### LTnewLM_34 . polypeptide 1296609 1299812 . + . ID=LTnewLM_340038300.1:pep;Derives_from=LTnewLM_340038300.1;orthologous_to=LmjF.34.3200_mRNA;ortholog_cluster=OG0005562;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1300374 1301009 1 + . ID=LTnewLM_340038400 LTnewLM_34 AUGUSTUS mRNA 1300374 1301009 1 + . ID=LTnewLM_340038400.1;Parent=LTnewLM_340038400 LTnewLM_34 AUGUSTUS CDS 1300374 1301009 1 + 0 ID=LTnewLM_340038400.1:CDS:1;Parent=LTnewLM_340038400.1 ### LTnewLM_34 . polypeptide 1300374 1301009 . + . ID=LTnewLM_340038400.1:pep;Derives_from=LTnewLM_340038400.1;orthologous_to=LmjF.34.3210_mRNA;ortholog_cluster=OG0005563;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1302045 1305518 1 + . ID=LTnewLM_340038500 LTnewLM_34 AUGUSTUS mRNA 1302045 1305518 1 + . ID=LTnewLM_340038500.1;Parent=LTnewLM_340038500 LTnewLM_34 AUGUSTUS CDS 1302045 1305518 1 + 0 ID=LTnewLM_340038500.1:CDS:1;Parent=LTnewLM_340038500.1 ### LTnewLM_34 . polypeptide 1302045 1305518 . + . ID=LTnewLM_340038500.1:pep;Derives_from=LTnewLM_340038500.1;orthologous_to=LmjF.34.3220_mRNA;ortholog_cluster=OG0005564;product=term%3DPhospholipid-translocating ATPase N-terminal/E1-E2 ATPase/Cation transport ATPase (P-type)/Phospholipid-translocating P-type ATPase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16209|Pfam:PF00122|Pfam:PF13246|Pfam:PF16212;Ontology_term=GO:0000166,GO:0046872 LTnewLM_34 Pfam protein_match 1302363 1302506 . + . Parent=LTnewLM_340038500.1:pep;Name=PF16209;signature_desc=Phospholipid-translocating ATPase N-terminal LTnewLM_34 Pfam protein_match 1302639 1303244 . + . Parent=LTnewLM_340038500.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_34 Pfam protein_match 1303758 1304009 . + . Parent=LTnewLM_340038500.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_34 Pfam protein_match 1304766 1305467 . + . Parent=LTnewLM_340038500.1:pep;Name=PF16212;signature_desc=Phospholipid-translocating P-type ATPase C-terminal ### LTnewLM_34 . pseudogene 1306370 1314481 . + . ID=LTnewLM_340038600:pseudogene;coverage=0.997;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.3230_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1306370 1314481 . + . ID=LTnewLM_340038600.1;Parent=LTnewLM_340038600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1306921 1314481 . + . ID=LTnewLM_340038600.1:pseudogenic_exon:1;Parent=LTnewLM_340038600.1;extra_copy_number=0 LTnewLM_34 . pseudogenic_transcript 1306954 1314481 . + . ID=LTnewLM_340038600.2;Parent=LTnewLM_340038600:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1307147 1314481 . + . ID=LTnewLM_340038600.2:pseudogenic_exon:1;Parent=LTnewLM_340038600.2;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1306921 1314481 . + . ID=LTnewLM_340038600.1:pep;Derives_from=LTnewLM_340038600.1;product=term%3Dhypothetical protein ### LTnewLM_34 . polypeptide 1307147 1314481 . + . ID=LTnewLM_340038600.2:pep;Derives_from=LTnewLM_340038600.2;orthologous_to=LmjF.34.3230.1_mRNA,LmjF.34.3230.2_mRNA;ortholog_cluster=OG0000545;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_34 Pfam protein_match 1311878 1312327 . + . Parent=LTnewLM_340038600.2:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_34 Pfam protein_match 1312691 1313134 . + . Parent=LTnewLM_340038600.2:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_34 Pfam protein_match 1313327 1313515 . + . Parent=LTnewLM_340038600.2:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 ### LTnewLM_34 AUGUSTUS gene 1315768 1317681 1 + . ID=LTnewLM_340038700 LTnewLM_34 AUGUSTUS mRNA 1315768 1317681 1 + . ID=LTnewLM_340038700.1;Parent=LTnewLM_340038700 LTnewLM_34 AUGUSTUS CDS 1315768 1317681 1 + 0 ID=LTnewLM_340038700.1:CDS:1;Parent=LTnewLM_340038700.1 ### LTnewLM_34 . polypeptide 1315768 1317681 . + . ID=LTnewLM_340038700.1:pep;Derives_from=LTnewLM_340038700.1;orthologous_to=LmjF.34.3240_mRNA;ortholog_cluster=OG0005565;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1318920 1320671 1 + . ID=LTnewLM_340038800 LTnewLM_34 AUGUSTUS mRNA 1318920 1320671 1 + . ID=LTnewLM_340038800.1;Parent=LTnewLM_340038800 LTnewLM_34 AUGUSTUS CDS 1318920 1320671 1 + 0 ID=LTnewLM_340038800.1:CDS:1;Parent=LTnewLM_340038800.1 ### LTnewLM_34 . polypeptide 1318920 1320671 . + . ID=LTnewLM_340038800.1:pep;Derives_from=LTnewLM_340038800.1;orthologous_to=LmjF.34.3250_mRNA;ortholog_cluster=OG0005566;product=term%3DThiamine pyrophosphate enzyme%2C N-terminal TPP binding domain/Thiamine pyrophosphate enzyme%2C central domain/Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02776|Pfam:PF00205|Pfam:PF02775;Ontology_term=GO:0003824,GO:0000287,GO:0030976 LTnewLM_34 Pfam protein_match 1318938 1319456 . + . Parent=LTnewLM_340038800.1:pep;Name=PF02776;signature_desc=Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain;Ontology_term=GO:0030976 LTnewLM_34 Pfam protein_match 1319523 1319909 . + . Parent=LTnewLM_340038800.1:pep;Name=PF00205;signature_desc=Thiamine pyrophosphate enzyme%2C central domain;Ontology_term=GO:0000287,GO:0030976 LTnewLM_34 Pfam protein_match 1320069 1320329 . + . Parent=LTnewLM_340038800.1:pep;Name=PF02775;signature_desc=Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain;Ontology_term=GO:0003824,GO:0030976 ### LTnewLM_34 AUGUSTUS gene 1324643 1327081 1.99 + . ID=LTnewLM_340038900 LTnewLM_34 AUGUSTUS mRNA 1324643 1327081 1 + . ID=LTnewLM_340038900.1;Parent=LTnewLM_340038900 LTnewLM_34 AUGUSTUS CDS 1324643 1327081 1 + 0 ID=LTnewLM_340038900.1:CDS:1;Parent=LTnewLM_340038900.1 LTnewLM_34 AUGUSTUS mRNA 1326194 1327081 0.99 + . ID=LTnewLM_340038900.2;Parent=LTnewLM_340038900 LTnewLM_34 AUGUSTUS CDS 1326194 1327081 0.99 + 0 ID=LTnewLM_340038900.2:CDS:1;Parent=LTnewLM_340038900.2 ### LTnewLM_34 . polypeptide 1324643 1327081 . + . ID=LTnewLM_340038900.1:pep;Derives_from=LTnewLM_340038900.1;orthologous_to=LTnewLM_340038900.2,LmjF.34.3260_mRNA;ortholog_cluster=OG0000459;product=term%3DDNA repair metallo-beta-lactamase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07522 LTnewLM_34 Pfam protein_match 1326263 1326550 . + . Parent=LTnewLM_340038900.1:pep;Name=PF07522;signature_desc=DNA repair metallo-beta-lactamase ### LTnewLM_34 . polypeptide 1326194 1327081 . + . ID=LTnewLM_340038900.2:pep;Derives_from=LTnewLM_340038900.2;orthologous_to=LTnewLM_340038900.1,LmjF.34.3260_mRNA;ortholog_cluster=OG0000459;product=term%3DDNA repair metallo-beta-lactamase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07522 LTnewLM_34 Pfam protein_match 1326260 1326550 . + . Parent=LTnewLM_340038900.2:pep;Name=PF07522;signature_desc=DNA repair metallo-beta-lactamase ### LTnewLM_34 Liftoff gene 1329823 1330463 . + . ID=LTnewLM_340039000;coverage=1.0;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.3270_0 LTnewLM_34 Liftoff mRNA 1329823 1330463 . + . ID=LTnewLM_340039000.1;Parent=LTnewLM_340039000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff five_prime_UTR 1329823 1329863 . + . ID=LTnewLM_340039000:five_prime_UTR;Parent=LTnewLM_340039000.1;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1329864 1330463 . + 0 ID=LTnewLM_340039000.1:CDS:1;Parent=LTnewLM_340039000.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1329864 1330463 . + . ID=LTnewLM_340039000.1:pep;Derives_from=LTnewLM_340039000.1;orthologous_to=LmjF.34.3270_mRNA;ortholog_cluster=OG0005567;product=term%3DProbable Zinc-ribbon domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311 LTnewLM_34 Pfam protein_match 1330110 1330277 . + . Parent=LTnewLM_340039000.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain ### LTnewLM_34 AUGUSTUS gene 1331662 1333410 1 + . ID=LTnewLM_340039100 LTnewLM_34 AUGUSTUS mRNA 1331662 1333410 1 + . ID=LTnewLM_340039100.1;Parent=LTnewLM_340039100 LTnewLM_34 AUGUSTUS CDS 1331662 1333410 1 + 0 ID=LTnewLM_340039100.1:CDS:1;Parent=LTnewLM_340039100.1 ### LTnewLM_34 . polypeptide 1331662 1333410 . + . ID=LTnewLM_340039100.1:pep;Derives_from=LTnewLM_340039100.1;orthologous_to=LmjF.34.3280_mRNA;ortholog_cluster=OG0005568;product=term%3DZn-finger in ubiquitin-hydrolases and other protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02148;Ontology_term=GO:0008270 LTnewLM_34 Pfam protein_match 1332427 1332603 . + . Parent=LTnewLM_340039100.1:pep;Name=PF02148;signature_desc=Zn-finger in ubiquitin-hydrolases and other protein;Ontology_term=GO:0008270 ### LTnewLM_34 AUGUSTUS gene 1334871 1336307 1 + . ID=LTnewLM_340039200 LTnewLM_34 AUGUSTUS mRNA 1334871 1336307 1 + . ID=LTnewLM_340039200.1;Parent=LTnewLM_340039200 LTnewLM_34 AUGUSTUS CDS 1334871 1336307 1 + 0 ID=LTnewLM_340039200.1:CDS:1;Parent=LTnewLM_340039200.1 ### LTnewLM_34 . polypeptide 1334871 1336307 . + . ID=LTnewLM_340039200.1:pep;Derives_from=LTnewLM_340039200.1;orthologous_to=LmjF.34.3290_mRNA;ortholog_cluster=OG0005569;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1337046 1337687 1 + . ID=LTnewLM_340039300 LTnewLM_34 AUGUSTUS mRNA 1337046 1337687 1 + . ID=LTnewLM_340039300.1;Parent=LTnewLM_340039300 LTnewLM_34 AUGUSTUS CDS 1337046 1337687 1 + 0 ID=LTnewLM_340039300.1:CDS:1;Parent=LTnewLM_340039300.1 ### LTnewLM_34 . polypeptide 1337046 1337687 . + . ID=LTnewLM_340039300.1:pep;Derives_from=LTnewLM_340039300.1;orthologous_to=LmjF.34.3300_mRNA;ortholog_cluster=OG0005570;product=term%3DEndoribonuclease YbeY%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02130;Ontology_term=GO:0004222,GO:0006364 LTnewLM_34 Pfam protein_match 1337106 1337618 . + . Parent=LTnewLM_340039300.1:pep;Name=PF02130;signature_desc=Endoribonuclease YbeY;Ontology_term=GO:0004222,GO:0006364 ### LTnewLM_34 AUGUSTUS gene 1338152 1339723 1 + . ID=LTnewLM_340039400 LTnewLM_34 AUGUSTUS mRNA 1338152 1339723 1 + . ID=LTnewLM_340039400.1;Parent=LTnewLM_340039400 LTnewLM_34 AUGUSTUS CDS 1338152 1339723 1 + 0 ID=LTnewLM_340039400.1:CDS:1;Parent=LTnewLM_340039400.1 ### LTnewLM_34 . polypeptide 1338152 1339723 . + . ID=LTnewLM_340039400.1:pep;Derives_from=LTnewLM_340039400.1;orthologous_to=LmjF.34.3310_mRNA;ortholog_cluster=OG0005571;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_34 Pfam protein_match 1339070 1339117 . + . Parent=LTnewLM_340039400.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_34 AUGUSTUS gene 1340907 1341482 1 + . ID=LTnewLM_340039500 LTnewLM_34 AUGUSTUS mRNA 1340907 1341482 1 + . ID=LTnewLM_340039500.1;Parent=LTnewLM_340039500 LTnewLM_34 AUGUSTUS CDS 1340907 1341482 1 + 0 ID=LTnewLM_340039500.1:CDS:1;Parent=LTnewLM_340039500.1 ### LTnewLM_34 . polypeptide 1340907 1341482 . + . ID=LTnewLM_340039500.1:pep;Derives_from=LTnewLM_340039500.1;orthologous_to=LmjF.34.3320_mRNA;ortholog_cluster=OG0005572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1342730 1344382 1 + . ID=LTnewLM_340039600 LTnewLM_34 AUGUSTUS mRNA 1342730 1344382 1 + . ID=LTnewLM_340039600.1;Parent=LTnewLM_340039600 LTnewLM_34 AUGUSTUS CDS 1342730 1344382 1 + 0 ID=LTnewLM_340039600.1:CDS:1;Parent=LTnewLM_340039600.1 ### LTnewLM_34 . polypeptide 1342730 1344382 . + . ID=LTnewLM_340039600.1:pep;Derives_from=LTnewLM_340039600.1;orthologous_to=LmjF.27.0090_mRNA,LmjF.34.3330_mRNA;ortholog_cluster=OG0000460;product=term%3DCytochrome P450%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00067;Ontology_term=GO:0055114,GO:0005506,GO:0016705,GO:0020037 LTnewLM_34 Pfam protein_match 1342940 1344160 . + . Parent=LTnewLM_340039600.1:pep;Name=PF00067;signature_desc=Cytochrome P450;Ontology_term=GO:0005506,GO:0016705,GO:0020037,GO:0055114 ### LTnewLM_34 . pseudogene 1348429 1350894 . + . ID=LTnewLM_340039700:pseudogene;coverage=0.999;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.3340_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1348429 1350894 . + . ID=LTnewLM_340039700.1;Parent=LTnewLM_340039700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1348429 1350894 . + . ID=LTnewLM_340039700.1:pseudogenic_exon:1;Parent=LTnewLM_340039700.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1348429 1350894 . + . ID=LTnewLM_340039700.1:pep;Derives_from=LTnewLM_340039700.1;orthologous_to=LmjF.34.3340_mRNA;ortholog_cluster=OG0007648;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1351369 1352976 0.91 + . ID=LTnewLM_340039800 LTnewLM_34 AUGUSTUS mRNA 1351369 1352976 0.91 + . ID=LTnewLM_340039800.1;Parent=LTnewLM_340039800 LTnewLM_34 AUGUSTUS CDS 1351369 1352976 0.91 + 0 ID=LTnewLM_340039800.1:CDS:1;Parent=LTnewLM_340039800.1 ### LTnewLM_34 . polypeptide 1351369 1352976 . + . ID=LTnewLM_340039800.1:pep;Derives_from=LTnewLM_340039800.1;orthologous_to=LmjF.34.3350_mRNA;ortholog_cluster=OG0005573;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004;Ontology_term=GO:0016887,GO:0005524 LTnewLM_34 Pfam protein_match 1351948 1352160 . + . Parent=LTnewLM_340039800.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 1351948 1352328 . + . Parent=LTnewLM_340039800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_34 AUGUSTUS gene 1353590 1354225 1 + . ID=LTnewLM_340039900 LTnewLM_34 AUGUSTUS mRNA 1353590 1354225 1 + . ID=LTnewLM_340039900.1;Parent=LTnewLM_340039900 LTnewLM_34 AUGUSTUS CDS 1353590 1354225 1 + 0 ID=LTnewLM_340039900.1:CDS:1;Parent=LTnewLM_340039900.1 ### LTnewLM_34 . polypeptide 1353590 1354225 . + . ID=LTnewLM_340039900.1:pep;Derives_from=LTnewLM_340039900.1;orthologous_to=LmjF.34.3360_mRNA;ortholog_cluster=OG0005574;product=term%3DD-Tyr-tRNA(Tyr) deacylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02580;Ontology_term=GO:0016788,GO:0019478,GO:0005737 LTnewLM_34 Pfam protein_match 1353674 1354216 . + . Parent=LTnewLM_340039900.1:pep;Name=PF02580;signature_desc=D-Tyr-tRNA(Tyr) deacylase;Ontology_term=GO:0016788,GO:0019478,GO:0005737 ### LTnewLM_34 AUGUSTUS gene 1355040 1355492 1 + . ID=LTnewLM_340040000 LTnewLM_34 AUGUSTUS mRNA 1355040 1355492 1 + . ID=LTnewLM_340040000.1;Parent=LTnewLM_340040000 LTnewLM_34 AUGUSTUS CDS 1355040 1355492 1 + 0 ID=LTnewLM_340040000.1:CDS:1;Parent=LTnewLM_340040000.1 ### LTnewLM_34 . polypeptide 1355040 1355492 . + . ID=LTnewLM_340040000.1:pep;Derives_from=LTnewLM_340040000.1;orthologous_to=LmjF.34.3370_mRNA;ortholog_cluster=OG0005575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1356640 1357545 1 + . ID=LTnewLM_340040100 LTnewLM_34 AUGUSTUS mRNA 1356640 1357545 1 + . ID=LTnewLM_340040100.1;Parent=LTnewLM_340040100 LTnewLM_34 AUGUSTUS CDS 1356640 1357545 1 + 0 ID=LTnewLM_340040100.1:CDS:1;Parent=LTnewLM_340040100.1 ### LTnewLM_34 . polypeptide 1356640 1357545 . + . ID=LTnewLM_340040100.1:pep;Derives_from=LTnewLM_340040100.1;orthologous_to=LmjF.34.3380_mRNA;ortholog_cluster=OG0005576;product=term%3DAldose 1-epimerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01263;Ontology_term=GO:0005975,GO:0016853 LTnewLM_34 Pfam protein_match 1356676 1357503 . + . Parent=LTnewLM_340040100.1:pep;Name=PF01263;signature_desc=Aldose 1-epimerase;Ontology_term=GO:0016853,GO:0005975 ### LTnewLM_34 AUGUSTUS gene 1363967 1366156 1 + . ID=LTnewLM_340040200 LTnewLM_34 AUGUSTUS mRNA 1363967 1366156 1 + . ID=LTnewLM_340040200.1;Parent=LTnewLM_340040200 LTnewLM_34 AUGUSTUS CDS 1363967 1366156 1 + 0 ID=LTnewLM_340040200.1:CDS:1;Parent=LTnewLM_340040200.1 ### LTnewLM_34 . polypeptide 1363967 1366156 . + . ID=LTnewLM_340040200.1:pep;Derives_from=LTnewLM_340040200.1;orthologous_to=LmjF.34.3390_mRNA;ortholog_cluster=OG0005577;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1369013 1369975 1 + . ID=LTnewLM_340040300 LTnewLM_34 AUGUSTUS mRNA 1369013 1369975 1 + . ID=LTnewLM_340040300.1;Parent=LTnewLM_340040300 LTnewLM_34 AUGUSTUS CDS 1369013 1369975 1 + 0 ID=LTnewLM_340040300.1:CDS:1;Parent=LTnewLM_340040300.1 ### LTnewLM_34 . polypeptide 1369013 1369975 . + . ID=LTnewLM_340040300.1:pep;Derives_from=LTnewLM_340040300.1;orthologous_to=LmjF.34.3400_mRNA;ortholog_cluster=OG0005578;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_34 Pfam protein_match 1369124 1369333 . + . Parent=LTnewLM_340040300.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_34 Liftoff gene 1372201 1372654 . + . ID=LTnewLM_340040400;coverage=0.976;sequence_ID=0.888;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.3410_0 LTnewLM_34 Liftoff mRNA 1372201 1372654 . + . ID=LTnewLM_340040400.1;Parent=LTnewLM_340040400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1372201 1372654 . + 0 ID=LTnewLM_340040400.1:CDS:1;Parent=LTnewLM_340040400.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1372201 1372654 . + . ID=LTnewLM_340040400.1:pep;Derives_from=LTnewLM_340040400.1;orthologous_to=LmjF.34.3410_mRNA;ortholog_cluster=OG0005579;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 1375222 1376781 . + . ID=LTnewLM_340040500;coverage=0.994;sequence_ID=0.941;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.3420_0 LTnewLM_34 Liftoff mRNA 1375222 1376781 . + . ID=LTnewLM_340040500.1;Parent=LTnewLM_340040500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1375222 1376781 . + 0 ID=LTnewLM_340040500.1:CDS:1;Parent=LTnewLM_340040500.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1375222 1376781 . + . ID=LTnewLM_340040500.1:pep;Derives_from=LTnewLM_340040500.1;orthologous_to=LmjF.34.3420_mRNA;ortholog_cluster=OG0005580;product=term%3DMetallo-beta-lactamase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00753 LTnewLM_34 Pfam protein_match 1375735 1376166 . + . Parent=LTnewLM_340040500.1:pep;Name=PF00753;signature_desc=Metallo-beta-lactamase superfamily ### LTnewLM_34 AUGUSTUS gene 1378069 1380339 1 + . ID=LTnewLM_340040600 LTnewLM_34 AUGUSTUS mRNA 1378069 1380339 1 + . ID=LTnewLM_340040600.1;Parent=LTnewLM_340040600 LTnewLM_34 AUGUSTUS CDS 1378069 1380339 1 + 0 ID=LTnewLM_340040600.1:CDS:1;Parent=LTnewLM_340040600.1 ### LTnewLM_34 . polypeptide 1378069 1380339 . + . ID=LTnewLM_340040600.1:pep;Derives_from=LTnewLM_340040600.1;orthologous_to=LmjF.34.3430_mRNA;ortholog_cluster=OG0005581;product=term%3DMetallo-beta-lactamase superfamily/Metallo-beta-lactamase superfamily domain/Beta-lactamase superfamily domain/Beta-Casp domain/Zn-dependent metallo-hydrolase RNA specificity domain/Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00753|Pfam:PF16661|Pfam:PF12706|Pfam:PF10996|Pfam:PF07521|Pfam:PF11718 LTnewLM_34 Pfam protein_match 1378171 1378674 . + . Parent=LTnewLM_340040600.1:pep;Name=PF00753;signature_desc=Metallo-beta-lactamase superfamily LTnewLM_34 Pfam protein_match 1378213 1378680 . + . Parent=LTnewLM_340040600.1:pep;Name=PF16661;signature_desc=Metallo-beta-lactamase superfamily domain LTnewLM_34 Pfam protein_match 1378288 1378719 . + . Parent=LTnewLM_340040600.1:pep;Name=PF12706;signature_desc=Beta-lactamase superfamily domain LTnewLM_34 Pfam protein_match 1378840 1379202 . + . Parent=LTnewLM_340040600.1:pep;Name=PF10996;signature_desc=Beta-Casp domain LTnewLM_34 Pfam protein_match 1379254 1379412 . + . Parent=LTnewLM_340040600.1:pep;Name=PF07521;signature_desc=Zn-dependent metallo-hydrolase RNA specificity domain LTnewLM_34 Pfam protein_match 1379542 1380270 . + . Parent=LTnewLM_340040600.1:pep;Name=PF11718;signature_desc=Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term ### LTnewLM_34 AUGUSTUS gene 1383610 1385517 1 + . ID=LTnewLM_340040700 LTnewLM_34 AUGUSTUS mRNA 1383610 1385517 1 + . ID=LTnewLM_340040700.1;Parent=LTnewLM_340040700 LTnewLM_34 AUGUSTUS CDS 1383610 1385517 1 + 0 ID=LTnewLM_340040700.1:CDS:1;Parent=LTnewLM_340040700.1 ### LTnewLM_34 . polypeptide 1383610 1385517 . + . ID=LTnewLM_340040700.1:pep;Derives_from=LTnewLM_340040700.1;orthologous_to=LmjF.34.3440_mRNA;ortholog_cluster=OG0005582;product=term%3DEukaryotic DNA topoisomerase I%2C DNA binding fragment/Eukaryotic DNA topoisomerase I%2C catalytic core%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02919|Pfam:PF01028;Ontology_term=GO:0003917,GO:0005694,GO:0003918,GO:0006265,GO:0003677 LTnewLM_34 Pfam protein_match 1383742 1384371 . + . Parent=LTnewLM_340040700.1:pep;Name=PF02919;signature_desc=Eukaryotic DNA topoisomerase I%2C DNA binding fragment;Ontology_term=GO:0003677,GO:0003917,GO:0006265,GO:0005694 LTnewLM_34 Pfam protein_match 1384381 1385058 . + . Parent=LTnewLM_340040700.1:pep;Name=PF01028;signature_desc=Eukaryotic DNA topoisomerase I%2C catalytic core;Ontology_term=GO:0003677,GO:0003918,GO:0006265 ### LTnewLM_34 AUGUSTUS gene 1387190 1390819 1 + . ID=LTnewLM_340040800 LTnewLM_34 AUGUSTUS mRNA 1387190 1390819 1 + . ID=LTnewLM_340040800.1;Parent=LTnewLM_340040800 LTnewLM_34 AUGUSTUS CDS 1387190 1390819 1 + 0 ID=LTnewLM_340040800.1:CDS:1;Parent=LTnewLM_340040800.1 ### LTnewLM_34 . polypeptide 1387190 1390819 . + . ID=LTnewLM_340040800.1:pep;Derives_from=LTnewLM_340040800.1;orthologous_to=LmjF.34.3450_mRNA;ortholog_cluster=OG0005583;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1391433 1392860 1 + . ID=LTnewLM_340040900 LTnewLM_34 AUGUSTUS mRNA 1391433 1392860 1 + . ID=LTnewLM_340040900.1;Parent=LTnewLM_340040900 LTnewLM_34 AUGUSTUS CDS 1391433 1392860 1 + 0 ID=LTnewLM_340040900.1:CDS:1;Parent=LTnewLM_340040900.1 ### LTnewLM_34 . polypeptide 1391433 1392860 . + . ID=LTnewLM_340040900.1:pep;Derives_from=LTnewLM_340040900.1;orthologous_to=LmjF.34.3460_mRNA;ortholog_cluster=OG0005584;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1394030 1395106 1 + . ID=LTnewLM_340041000 LTnewLM_34 AUGUSTUS mRNA 1394030 1395106 1 + . ID=LTnewLM_340041000.1;Parent=LTnewLM_340041000 LTnewLM_34 AUGUSTUS CDS 1394030 1395106 1 + 0 ID=LTnewLM_340041000.1:CDS:1;Parent=LTnewLM_340041000.1 ### LTnewLM_34 . polypeptide 1394030 1395106 . + . ID=LTnewLM_340041000.1:pep;Derives_from=LTnewLM_340041000.1;orthologous_to=LmjF.34.3470_mRNA;ortholog_cluster=OG0005585;product=term%3DN%2CN dimethylarginine dimethylhydrolase%2C eukaryotic%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19420 LTnewLM_34 Pfam protein_match 1394345 1394929 . + . Parent=LTnewLM_340041000.1:pep;Name=PF19420;signature_desc=N%2CN dimethylarginine dimethylhydrolase%2C eukaryotic ### LTnewLM_34 AUGUSTUS gene 1397408 1398121 1 + . ID=LTnewLM_340041100 LTnewLM_34 AUGUSTUS mRNA 1397408 1398121 1 + . ID=LTnewLM_340041100.1;Parent=LTnewLM_340041100 LTnewLM_34 AUGUSTUS CDS 1397408 1398121 1 + 0 ID=LTnewLM_340041100.1:CDS:1;Parent=LTnewLM_340041100.1 ### LTnewLM_34 . polypeptide 1397408 1398121 . + . ID=LTnewLM_340041100.1:pep;Derives_from=LTnewLM_340041100.1;orthologous_to=LmjF.34.3480_mRNA;ortholog_cluster=OG0005586;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1398888 1400165 1 + . ID=LTnewLM_340041200 LTnewLM_34 AUGUSTUS mRNA 1398888 1400165 1 + . ID=LTnewLM_340041200.1;Parent=LTnewLM_340041200 LTnewLM_34 AUGUSTUS CDS 1398888 1400165 1 + 0 ID=LTnewLM_340041200.1:CDS:1;Parent=LTnewLM_340041200.1 ### LTnewLM_34 . polypeptide 1398888 1400165 . + . ID=LTnewLM_340041200.1:pep;Derives_from=LTnewLM_340041200.1;orthologous_to=LmjF.34.3490_mRNA;ortholog_cluster=OG0005587;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13374|Pfam:PF13424|Pfam:PF13181;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1399245 1399361 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_34 Pfam protein_match 1399629 1399730 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_34 Pfam protein_match 1399746 1399865 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_34 Pfam protein_match 1399746 1399967 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_34 Pfam protein_match 1399878 1399970 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1400022 1400117 . + . Parent=LTnewLM_340041200.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat ### LTnewLM_34 AUGUSTUS gene 1401080 1402459 1 + . ID=LTnewLM_340041300 LTnewLM_34 AUGUSTUS mRNA 1401080 1402459 1 + . ID=LTnewLM_340041300.1;Parent=LTnewLM_340041300 LTnewLM_34 AUGUSTUS CDS 1401080 1402459 1 + 0 ID=LTnewLM_340041300.1:CDS:1;Parent=LTnewLM_340041300.1 ### LTnewLM_34 . polypeptide 1401080 1402459 . + . ID=LTnewLM_340041300.1:pep;Derives_from=LTnewLM_340041300.1;orthologous_to=LmjF.34.3500_mRNA;ortholog_cluster=OG0005588;product=term%3DTIP49 P-loop domain/Holliday junction DNA helicase RuvB P-loop domain/ATPase family associated with various cellular activities (AAA)/TIP49 AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06068|Pfam:PF05496|Pfam:PF00004|Pfam:PF17856;Ontology_term=GO:0009378,GO:0005524,GO:0006310,GO:0006281,GO:0003678 LTnewLM_34 Pfam protein_match 1401128 1402183 . + . Parent=LTnewLM_340041300.1:pep;Name=PF06068;signature_desc=TIP49 P-loop domain;Ontology_term=GO:0003678,GO:0005524 LTnewLM_34 Pfam protein_match 1401197 1401358 . + . Parent=LTnewLM_340041300.1:pep;Name=PF05496;signature_desc=Holliday junction DNA helicase RuvB P-loop domain;Ontology_term=GO:0009378,GO:0006281,GO:0006310 LTnewLM_34 Pfam protein_match 1401284 1401430 . + . Parent=LTnewLM_340041300.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 1402205 1402399 . + . Parent=LTnewLM_340041300.1:pep;Name=PF17856;signature_desc=TIP49 AAA-lid domain ### LTnewLM_34 AUGUSTUS gene 1403592 1404578 1 + . ID=LTnewLM_340041400 LTnewLM_34 AUGUSTUS mRNA 1403592 1404578 1 + . ID=LTnewLM_340041400.1;Parent=LTnewLM_340041400 LTnewLM_34 AUGUSTUS CDS 1403592 1404578 1 + 0 ID=LTnewLM_340041400.1:CDS:1;Parent=LTnewLM_340041400.1 ### LTnewLM_34 . polypeptide 1403592 1404578 . + . ID=LTnewLM_340041400.1:pep;Derives_from=LTnewLM_340041400.1;orthologous_to=LmjF.34.3510_mRNA;ortholog_cluster=OG0005589;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1405528 1408392 1 + . ID=LTnewLM_340041500 LTnewLM_34 AUGUSTUS mRNA 1405528 1408392 1 + . ID=LTnewLM_340041500.1;Parent=LTnewLM_340041500 LTnewLM_34 AUGUSTUS CDS 1405528 1408392 1 + 0 ID=LTnewLM_340041500.1:CDS:1;Parent=LTnewLM_340041500.1 ### LTnewLM_34 . polypeptide 1405528 1408392 . + . ID=LTnewLM_340041500.1:pep;Derives_from=LTnewLM_340041500.1;orthologous_to=LmjF.34.3520_mRNA;ortholog_cluster=OG0005590;product=term%3DPeroxisome biogenesis factor 1%2C N-terminal/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09262|Pfam:PF00004;Ontology_term=GO:0007031,GO:0005777,GO:0005524 LTnewLM_34 Pfam protein_match 1405828 1406070 . + . Parent=LTnewLM_340041500.1:pep;Name=PF09262;signature_desc=Peroxisome biogenesis factor 1%2C N-terminal;Ontology_term=GO:0005524,GO:0007031,GO:0005777 LTnewLM_34 Pfam protein_match 1406695 1407084 . + . Parent=LTnewLM_340041500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_34 Pfam protein_match 1407463 1407843 . + . Parent=LTnewLM_340041500.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_34 Aragorn_1.2.36 gene 1408636 1408709 . - . ID=LTnewLM_340041600 LTnewLM_34 Aragorn_1.2.36 tRNA 1408636 1408709 . - . ID=LTnewLM_340041600:tRNA;Parent=LTnewLM_340041600;aa=Asn;anticodon=gtt;gc_content=60.8 ### LTnewLM_34 Aragorn_1.2.36 gene 1409181 1409254 . + . ID=LTnewLM_340041700 LTnewLM_34 Aragorn_1.2.36 tRNA 1409181 1409254 . + . ID=LTnewLM_340041700:tRNA;Parent=LTnewLM_340041700;aa=Asn;anticodon=gtt;gc_content=60.8 ### LTnewLM_34 AUGUSTUS gene 1409855 1415692 0.54 + . ID=LTnewLM_340041800 LTnewLM_34 AUGUSTUS mRNA 1409855 1415692 0.54 + . ID=LTnewLM_340041800.1;Parent=LTnewLM_340041800 LTnewLM_34 AUGUSTUS CDS 1409855 1411678 0.54 + 0 ID=LTnewLM_340041800.1:CDS:1;Parent=LTnewLM_340041800.1 LTnewLM_34 AUGUSTUS CDS 1412684 1415692 0.83 + 0 ID=LTnewLM_340041800.1:CDS:2;Parent=LTnewLM_340041800.1 ### LTnewLM_34 . polypeptide 1409855 1415692 . + . ID=LTnewLM_340041800.1:pep;Derives_from=LTnewLM_340041800.1;orthologous_to=LmjF.34.3530_mRNA;ortholog_cluster=OG0005591;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1416389 1417063 1 + . ID=LTnewLM_340041900 LTnewLM_34 AUGUSTUS mRNA 1416389 1417063 1 + . ID=LTnewLM_340041900.1;Parent=LTnewLM_340041900 LTnewLM_34 AUGUSTUS CDS 1416389 1417063 1 + 0 ID=LTnewLM_340041900.1:CDS:1;Parent=LTnewLM_340041900.1 ### LTnewLM_34 . polypeptide 1416389 1417063 . + . ID=LTnewLM_340041900.1:pep;Derives_from=LTnewLM_340041900.1;orthologous_to=LmjF.34.3540_mRNA;ortholog_cluster=OG0005592;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1418023 1419249 1 + . ID=LTnewLM_340042000 LTnewLM_34 AUGUSTUS mRNA 1418023 1419249 1 + . ID=LTnewLM_340042000.1;Parent=LTnewLM_340042000 LTnewLM_34 AUGUSTUS CDS 1418023 1419249 1 + 0 ID=LTnewLM_340042000.1:CDS:1;Parent=LTnewLM_340042000.1 ### LTnewLM_34 . polypeptide 1418023 1419249 . + . ID=LTnewLM_340042000.1:pep;Derives_from=LTnewLM_340042000.1;orthologous_to=LmjF.34.3550_mRNA;ortholog_cluster=OG0005593;product=term%3DProgrammed cell death protein 2%2C C-terminal putative domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04194;Ontology_term=GO:0005737 LTnewLM_34 Pfam protein_match 1418908 1419234 . + . Parent=LTnewLM_340042000.1:pep;Name=PF04194;signature_desc=Programmed cell death protein 2%2C C-terminal putative domain;Ontology_term=GO:0005737 ### LTnewLM_34 AUGUSTUS gene 1419838 1420863 1 + . ID=LTnewLM_340042100 LTnewLM_34 AUGUSTUS mRNA 1419838 1420863 1 + . ID=LTnewLM_340042100.1;Parent=LTnewLM_340042100 LTnewLM_34 AUGUSTUS CDS 1419838 1420863 1 + 0 ID=LTnewLM_340042100.1:CDS:1;Parent=LTnewLM_340042100.1 ### LTnewLM_34 . polypeptide 1419838 1420863 . + . ID=LTnewLM_340042100.1:pep;Derives_from=LTnewLM_340042100.1;orthologous_to=LmjF.34.3560_mRNA;ortholog_cluster=OG0005594;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat/Ankyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13606|Pfam:PF00023|Pfam:PF13637|Pfam:PF13857;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1419919 1420128 . + . Parent=LTnewLM_340042100.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_34 Pfam protein_match 1419949 1420233 . + . Parent=LTnewLM_340042100.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_34 Pfam protein_match 1420039 1420125 . + . Parent=LTnewLM_340042100.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1420039 1420131 . + . Parent=LTnewLM_340042100.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1420078 1420203 . + . Parent=LTnewLM_340042100.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_34 Pfam protein_match 1420138 1420257 . + . Parent=LTnewLM_340042100.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_34 Pfam protein_match 1420144 1420227 . + . Parent=LTnewLM_340042100.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1420147 1420233 . + . Parent=LTnewLM_340042100.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1420189 1420302 . + . Parent=LTnewLM_340042100.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_34 Pfam protein_match 1420243 1420416 . + . Parent=LTnewLM_340042100.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_34 AUGUSTUS gene 1422530 1425352 1 + . ID=LTnewLM_340042200 LTnewLM_34 AUGUSTUS mRNA 1422530 1425352 1 + . ID=LTnewLM_340042200.1;Parent=LTnewLM_340042200 LTnewLM_34 AUGUSTUS CDS 1422530 1425352 1 + 0 ID=LTnewLM_340042200.1:CDS:1;Parent=LTnewLM_340042200.1 ### LTnewLM_34 . polypeptide 1422530 1425352 . + . ID=LTnewLM_340042200.1:pep;Derives_from=LTnewLM_340042200.1;orthologous_to=LmjF.34.3570_mRNA;ortholog_cluster=OG0005595;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1426136 1428748 1 + . ID=LTnewLM_340042300 LTnewLM_34 AUGUSTUS mRNA 1426136 1428748 1 + . ID=LTnewLM_340042300.1;Parent=LTnewLM_340042300 LTnewLM_34 AUGUSTUS CDS 1426136 1428748 1 + 0 ID=LTnewLM_340042300.1:CDS:1;Parent=LTnewLM_340042300.1 ### LTnewLM_34 . polypeptide 1426136 1428748 . + . ID=LTnewLM_340042300.1:pep;Derives_from=LTnewLM_340042300.1;orthologous_to=LmjF.34.3580_mRNA;ortholog_cluster=OG0005596;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1429585 1431420 1 + . ID=LTnewLM_340042400 LTnewLM_34 AUGUSTUS mRNA 1429585 1431420 1 + . ID=LTnewLM_340042400.1;Parent=LTnewLM_340042400 LTnewLM_34 AUGUSTUS CDS 1429585 1431420 1 + 0 ID=LTnewLM_340042400.1:CDS:1;Parent=LTnewLM_340042400.1 ### LTnewLM_34 . polypeptide 1429585 1431420 . + . ID=LTnewLM_340042400.1:pep;Derives_from=LTnewLM_340042400.1;orthologous_to=LTnewLM_140005200.1,LmjF.34.3590_mRNA;ortholog_cluster=OG0000328;product=term%3DPhosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00454;Ontology_term=GO:0016773 LTnewLM_34 Pfam protein_match 1430635 1430829 . + . Parent=LTnewLM_340042400.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_34 Pfam protein_match 1430845 1431216 . + . Parent=LTnewLM_340042400.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_34 AUGUSTUS gene 1433654 1434820 1 + . ID=LTnewLM_340042500 LTnewLM_34 AUGUSTUS mRNA 1433654 1434820 1 + . ID=LTnewLM_340042500.1;Parent=LTnewLM_340042500 LTnewLM_34 AUGUSTUS CDS 1433654 1434820 1 + 0 ID=LTnewLM_340042500.1:CDS:1;Parent=LTnewLM_340042500.1 ### LTnewLM_34 . polypeptide 1433654 1434820 . + . ID=LTnewLM_340042500.1:pep;Derives_from=LTnewLM_340042500.1;orthologous_to=LmjF.34.3600_mRNA;ortholog_cluster=OG0005597;product=term%3DpfkB family carbohydrate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00294 LTnewLM_34 Pfam protein_match 1433849 1434739 . + . Parent=LTnewLM_340042500.1:pep;Name=PF00294;signature_desc=pfkB family carbohydrate kinase ### LTnewLM_34 AUGUSTUS gene 1438824 1439345 1 + . ID=LTnewLM_340042600 LTnewLM_34 AUGUSTUS mRNA 1438824 1439345 1 + . ID=LTnewLM_340042600.1;Parent=LTnewLM_340042600 LTnewLM_34 AUGUSTUS CDS 1438824 1439345 1 + 0 ID=LTnewLM_340042600.1:CDS:1;Parent=LTnewLM_340042600.1 ### LTnewLM_34 . polypeptide 1438824 1439345 . + . ID=LTnewLM_340042600.1:pep;Derives_from=LTnewLM_340042600.1;orthologous_to=LmjF.34.3610_mRNA;ortholog_cluster=OG0005598;product=term%3DComplex 1 protein (LYR family)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05347 LTnewLM_34 Pfam protein_match 1438887 1439060 . + . Parent=LTnewLM_340042600.1:pep;Name=PF05347;signature_desc=Complex 1 protein (LYR family) ### LTnewLM_34 AUGUSTUS gene 1440666 1442378 1 + . ID=LTnewLM_340042700 LTnewLM_34 AUGUSTUS mRNA 1440666 1442378 1 + . ID=LTnewLM_340042700.1;Parent=LTnewLM_340042700 LTnewLM_34 AUGUSTUS CDS 1440666 1442378 1 + 0 ID=LTnewLM_340042700.1:CDS:1;Parent=LTnewLM_340042700.1 ### LTnewLM_34 . polypeptide 1440666 1442378 . + . ID=LTnewLM_340042700.1:pep;Derives_from=LTnewLM_340042700.1;orthologous_to=LmjF.34.3620_mRNA;ortholog_cluster=OG0005599;product=term%3DDomain of unknown function (DUF3336)/Patatin-like phospholipase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11815|Pfam:PF01734;Ontology_term=GO:0006629 LTnewLM_34 Pfam protein_match 1440819 1441121 . + . Parent=LTnewLM_340042700.1:pep;Name=PF11815;signature_desc=Domain of unknown function (DUF3336) LTnewLM_34 Pfam protein_match 1441233 1441712 . + . Parent=LTnewLM_340042700.1:pep;Name=PF01734;signature_desc=Patatin-like phospholipase;Ontology_term=GO:0006629 ### LTnewLM_34 AUGUSTUS gene 1443480 1445015 1 + . ID=LTnewLM_340042800 LTnewLM_34 AUGUSTUS mRNA 1443480 1445015 1 + . ID=LTnewLM_340042800.1;Parent=LTnewLM_340042800 LTnewLM_34 AUGUSTUS CDS 1443480 1445015 1 + 0 ID=LTnewLM_340042800.1:CDS:1;Parent=LTnewLM_340042800.1 ### LTnewLM_34 . polypeptide 1443480 1445015 . + . ID=LTnewLM_340042800.1:pep;Derives_from=LTnewLM_340042800.1;orthologous_to=LmjF.34.3630_mRNA;ortholog_cluster=OG0005600;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 1443558 1444346 . + . Parent=LTnewLM_340042800.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 1447316 1447804 1 + . ID=LTnewLM_340042900 LTnewLM_34 AUGUSTUS mRNA 1447316 1447804 1 + . ID=LTnewLM_340042900.1;Parent=LTnewLM_340042900 LTnewLM_34 AUGUSTUS CDS 1447316 1447804 1 + 0 ID=LTnewLM_340042900.1:CDS:1;Parent=LTnewLM_340042900.1 ### LTnewLM_34 . polypeptide 1447316 1447804 . + . ID=LTnewLM_340042900.1:pep;Derives_from=LTnewLM_340042900.1;orthologous_to=LTnewLM_340043000.1,LmjF.34.3640_mRNA;ortholog_cluster=OG0000461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1451665 1452153 1 + . ID=LTnewLM_340043000 LTnewLM_34 AUGUSTUS mRNA 1451665 1452153 1 + . ID=LTnewLM_340043000.1;Parent=LTnewLM_340043000 LTnewLM_34 AUGUSTUS CDS 1451665 1452153 1 + 0 ID=LTnewLM_340043000.1:CDS:1;Parent=LTnewLM_340043000.1 ### LTnewLM_34 . polypeptide 1451665 1452153 . + . ID=LTnewLM_340043000.1:pep;Derives_from=LTnewLM_340043000.1;orthologous_to=LTnewLM_340042900.1,LmjF.34.3640_mRNA;ortholog_cluster=OG0000461;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1455990 1456313 1 + . ID=LTnewLM_340043100 LTnewLM_34 AUGUSTUS mRNA 1455990 1456313 1 + . ID=LTnewLM_340043100.1;Parent=LTnewLM_340043100 LTnewLM_34 AUGUSTUS CDS 1455990 1456313 1 + 0 ID=LTnewLM_340043100.1:CDS:1;Parent=LTnewLM_340043100.1 ### LTnewLM_34 . polypeptide 1455990 1456313 . + . ID=LTnewLM_340043100.1:pep;Derives_from=LTnewLM_340043100.1;orthologous_to=LmjF.34.3645_mRNA;ortholog_cluster=OG0005601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1460174 1460653 1 + . ID=LTnewLM_340043200 LTnewLM_34 AUGUSTUS mRNA 1460174 1460653 1 + . ID=LTnewLM_340043200.1;Parent=LTnewLM_340043200 LTnewLM_34 AUGUSTUS CDS 1460174 1460653 1 + 0 ID=LTnewLM_340043200.1:CDS:1;Parent=LTnewLM_340043200.1 ### LTnewLM_34 . polypeptide 1460174 1460653 . + . ID=LTnewLM_340043200.1:pep;Derives_from=LTnewLM_340043200.1;orthologous_to=LTnewLM_160009900.1,LmjF.16.0460_mRNA;ortholog_cluster=OG0000347;product=term%3DRibosomal protein L21e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01157;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_34 Pfam protein_match 1460174 1460473 . + . Parent=LTnewLM_340043200.1:pep;Name=PF01157;signature_desc=Ribosomal protein L21e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1462012 1463925 1 + . ID=LTnewLM_340043300 LTnewLM_34 AUGUSTUS mRNA 1462012 1463925 1 + . ID=LTnewLM_340043300.1;Parent=LTnewLM_340043300 LTnewLM_34 AUGUSTUS CDS 1462012 1463925 1 + 0 ID=LTnewLM_340043300.1:CDS:1;Parent=LTnewLM_340043300.1 ### LTnewLM_34 . polypeptide 1462012 1463925 . + . ID=LTnewLM_340043300.1:pep;Derives_from=LTnewLM_340043300.1;orthologous_to=LmjF.34.3660_mRNA;ortholog_cluster=OG0005602;product=term%3DEndomembrane protein 70%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02990;Ontology_term=GO:0016021 LTnewLM_34 Pfam protein_match 1462198 1463784 . + . Parent=LTnewLM_340043300.1:pep;Name=PF02990;signature_desc=Endomembrane protein 70;Ontology_term=GO:0016021 ### LTnewLM_34 AUGUSTUS gene 1467777 1469609 1 + . ID=LTnewLM_340043400 LTnewLM_34 AUGUSTUS mRNA 1467777 1469609 1 + . ID=LTnewLM_340043400.1;Parent=LTnewLM_340043400 LTnewLM_34 AUGUSTUS CDS 1467777 1469609 1 + 0 ID=LTnewLM_340043400.1:CDS:1;Parent=LTnewLM_340043400.1 ### LTnewLM_34 . polypeptide 1467777 1469609 . + . ID=LTnewLM_340043400.1:pep;Derives_from=LTnewLM_340043400.1;orthologous_to=LmjF.34.3670_mRNA;ortholog_cluster=OG0005603;product=term%3DATP synthase alpha/beta family%2C beta-barrel domain/ATPsynthase alpha/beta subunit N-term extension/ATP synthase alpha/beta family%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02874|Pfam:PF16886|Pfam:PF00006;Ontology_term=GO:0046034,GO:0005524,GO:0015992 LTnewLM_34 Pfam protein_match 1467828 1468010 . + . Parent=LTnewLM_340043400.1:pep;Name=PF02874;signature_desc=ATP synthase alpha/beta family%2C beta-barrel domain;Ontology_term=GO:0015992,GO:0046034 LTnewLM_34 Pfam protein_match 1468059 1468418 . + . Parent=LTnewLM_340043400.1:pep;Name=PF16886;signature_desc=ATPsynthase alpha/beta subunit N-term extension LTnewLM_34 Pfam protein_match 1468449 1469123 . + . Parent=LTnewLM_340043400.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 ### LTnewLM_34 AUGUSTUS gene 1471587 1472195 1 + . ID=LTnewLM_340043500 LTnewLM_34 AUGUSTUS mRNA 1471587 1472195 1 + . ID=LTnewLM_340043500.1;Parent=LTnewLM_340043500 LTnewLM_34 AUGUSTUS CDS 1471587 1472195 1 + 0 ID=LTnewLM_340043500.1:CDS:1;Parent=LTnewLM_340043500.1 ### LTnewLM_34 . polypeptide 1471587 1472195 . + . ID=LTnewLM_340043500.1:pep;Derives_from=LTnewLM_340043500.1;orthologous_to=LmjF.34.3680_mRNA;ortholog_cluster=OG0005604;product=term%3DRibosomal protein L13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00572;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_34 Pfam protein_match 1471710 1472078 . + . Parent=LTnewLM_340043500.1:pep;Name=PF00572;signature_desc=Ribosomal protein L13;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1473194 1477318 1 + . ID=LTnewLM_340043600 LTnewLM_34 AUGUSTUS mRNA 1473194 1477318 1 + . ID=LTnewLM_340043600.1;Parent=LTnewLM_340043600 LTnewLM_34 AUGUSTUS CDS 1473194 1477318 1 + 0 ID=LTnewLM_340043600.1:CDS:1;Parent=LTnewLM_340043600.1 ### LTnewLM_34 . polypeptide 1473194 1477318 . + . ID=LTnewLM_340043600.1:pep;Derives_from=LTnewLM_340043600.1;orthologous_to=LmjF.34.3690_mRNA;ortholog_cluster=OG0005605;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1478024 1479400 1 + . ID=LTnewLM_340043700 LTnewLM_34 AUGUSTUS mRNA 1478024 1479400 1 + . ID=LTnewLM_340043700.1;Parent=LTnewLM_340043700 LTnewLM_34 AUGUSTUS CDS 1478024 1479400 1 + 0 ID=LTnewLM_340043700.1:CDS:1;Parent=LTnewLM_340043700.1 ### LTnewLM_34 . polypeptide 1478024 1479400 . + . ID=LTnewLM_340043700.1:pep;Derives_from=LTnewLM_340043700.1;orthologous_to=LmjF.34.3700_mRNA;ortholog_cluster=OG0005606;product=term%3DInositol-pentakisphosphate 2-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06090;Ontology_term=GO:0035299,GO:0005524 LTnewLM_34 Pfam protein_match 1478303 1479346 . + . Parent=LTnewLM_340043700.1:pep;Name=PF06090;signature_desc=Inositol-pentakisphosphate 2-kinase;Ontology_term=GO:0005524,GO:0035299 ### LTnewLM_34 AUGUSTUS gene 1480776 1481327 1 + . ID=LTnewLM_340043800 LTnewLM_34 AUGUSTUS mRNA 1480776 1481327 1 + . ID=LTnewLM_340043800.1;Parent=LTnewLM_340043800 LTnewLM_34 AUGUSTUS CDS 1480776 1481327 1 + 0 ID=LTnewLM_340043800.1:CDS:1;Parent=LTnewLM_340043800.1 ### LTnewLM_34 . polypeptide 1480776 1481327 . + . ID=LTnewLM_340043800.1:pep;Derives_from=LTnewLM_340043800.1;orthologous_to=LmjF.34.3710_mRNA;ortholog_cluster=OG0005607;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1482254 1483162 1 + . ID=LTnewLM_340043900 LTnewLM_34 AUGUSTUS mRNA 1482254 1483162 1 + . ID=LTnewLM_340043900.1;Parent=LTnewLM_340043900 LTnewLM_34 AUGUSTUS CDS 1482254 1483162 1 + 0 ID=LTnewLM_340043900.1:CDS:1;Parent=LTnewLM_340043900.1 ### LTnewLM_34 . polypeptide 1482254 1483162 . + . ID=LTnewLM_340043900.1:pep;Derives_from=LTnewLM_340043900.1;orthologous_to=LmjF.34.3720_mRNA;ortholog_cluster=OG0005608;product=term%3DProtein of unknown function (DUF501)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04417 LTnewLM_34 Pfam protein_match 1482368 1482781 . + . Parent=LTnewLM_340043900.1:pep;Name=PF04417;signature_desc=Protein of unknown function (DUF501) ### LTnewLM_34 AUGUSTUS gene 1483929 1484975 1 + . ID=LTnewLM_340044000 LTnewLM_34 AUGUSTUS mRNA 1483929 1484975 1 + . ID=LTnewLM_340044000.1;Parent=LTnewLM_340044000 LTnewLM_34 AUGUSTUS CDS 1483929 1484975 1 + 0 ID=LTnewLM_340044000.1:CDS:1;Parent=LTnewLM_340044000.1 ### LTnewLM_34 . polypeptide 1483929 1484975 . + . ID=LTnewLM_340044000.1:pep;Derives_from=LTnewLM_340044000.1;orthologous_to=LmjF.34.3730_mRNA;ortholog_cluster=OG0005609;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1485670 1487136 1 + . ID=LTnewLM_340044100 LTnewLM_34 AUGUSTUS mRNA 1485670 1487136 1 + . ID=LTnewLM_340044100.1;Parent=LTnewLM_340044100 LTnewLM_34 AUGUSTUS CDS 1485670 1487136 1 + 0 ID=LTnewLM_340044100.1:CDS:1;Parent=LTnewLM_340044100.1 ### LTnewLM_34 . polypeptide 1485670 1487136 . + . ID=LTnewLM_340044100.1:pep;Derives_from=LTnewLM_340044100.1;orthologous_to=LmjF.34.3740_mRNA;ortholog_cluster=OG0005610;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_34 Pfam protein_match 1485997 1487103 . + . Parent=LTnewLM_340044100.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_34 AUGUSTUS gene 1490119 1491618 0.55 + . ID=LTnewLM_340044200 LTnewLM_34 AUGUSTUS mRNA 1490119 1491618 0.55 + . ID=LTnewLM_340044200.1;Parent=LTnewLM_340044200 LTnewLM_34 AUGUSTUS CDS 1490119 1491434 1 + 0 ID=LTnewLM_340044200.1:CDS:1;Parent=LTnewLM_340044200.1 LTnewLM_34 AUGUSTUS CDS 1491480 1491618 0.55 + 1 ID=LTnewLM_340044200.1:CDS:2;Parent=LTnewLM_340044200.1 ### LTnewLM_34 . polypeptide 1490119 1491618 . + . ID=LTnewLM_340044200.1:pep;Derives_from=LTnewLM_340044200.1;orthologous_to=LmjF.34.3745_mRNA;ortholog_cluster=OG0005611;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1494323 1495984 1 + . ID=LTnewLM_340044300 LTnewLM_34 AUGUSTUS mRNA 1494323 1495984 1 + . ID=LTnewLM_340044300.1;Parent=LTnewLM_340044300 LTnewLM_34 AUGUSTUS CDS 1494323 1495984 1 + 0 ID=LTnewLM_340044300.1:CDS:1;Parent=LTnewLM_340044300.1 ### LTnewLM_34 . polypeptide 1494323 1495984 . + . ID=LTnewLM_340044300.1:pep;Derives_from=LTnewLM_340044300.1;orthologous_to=LmjF.34.3750_mRNA;ortholog_cluster=OG0005612;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1496881 1498149 1 + . ID=LTnewLM_340044400 LTnewLM_34 AUGUSTUS mRNA 1496881 1498149 1 + . ID=LTnewLM_340044400.1;Parent=LTnewLM_340044400 LTnewLM_34 AUGUSTUS CDS 1496881 1498149 1 + 0 ID=LTnewLM_340044400.1:CDS:1;Parent=LTnewLM_340044400.1 ### LTnewLM_34 . polypeptide 1496881 1498149 . + . ID=LTnewLM_340044400.1:pep;Derives_from=LTnewLM_340044400.1;orthologous_to=LmjF.34.3760_mRNA;ortholog_cluster=OG0005613;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_34 Pfam protein_match 1497235 1498140 . + . Parent=LTnewLM_340044400.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_34 AUGUSTUS gene 1499303 1500193 1 + . ID=LTnewLM_340044500 LTnewLM_34 AUGUSTUS mRNA 1499303 1500193 1 + . ID=LTnewLM_340044500.1;Parent=LTnewLM_340044500 LTnewLM_34 AUGUSTUS CDS 1499303 1500193 1 + 0 ID=LTnewLM_340044500.1:CDS:1;Parent=LTnewLM_340044500.1 ### LTnewLM_34 . polypeptide 1499303 1500193 . + . ID=LTnewLM_340044500.1:pep;Derives_from=LTnewLM_340044500.1;orthologous_to=LmjF.34.3770_mRNA;ortholog_cluster=OG0005614;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1500997 1502778 1 + . ID=LTnewLM_340044600 LTnewLM_34 AUGUSTUS mRNA 1500997 1502778 1 + . ID=LTnewLM_340044600.1;Parent=LTnewLM_340044600 LTnewLM_34 AUGUSTUS CDS 1500997 1502778 1 + 0 ID=LTnewLM_340044600.1:CDS:1;Parent=LTnewLM_340044600.1 ### LTnewLM_34 . polypeptide 1500997 1502778 . + . ID=LTnewLM_340044600.1:pep;Derives_from=LTnewLM_340044600.1;orthologous_to=LmjF.34.3780_mRNA;ortholog_cluster=OG0005615;product=term%3DPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I/Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II/Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02878|Pfam:PF02879|Pfam:PF02880;Ontology_term=GO:0005975,GO:0016868 LTnewLM_34 Pfam protein_match 1501123 1501542 . + . Parent=LTnewLM_340044600.1:pep;Name=PF02878;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I;Ontology_term=GO:0016868,GO:0005975 LTnewLM_34 Pfam protein_match 1501624 1501935 . + . Parent=LTnewLM_340044600.1:pep;Name=PF02879;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;Ontology_term=GO:0016868,GO:0005975 LTnewLM_34 Pfam protein_match 1501975 1502355 . + . Parent=LTnewLM_340044600.1:pep;Name=PF02880;signature_desc=Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III;Ontology_term=GO:0016868,GO:0005975 ### LTnewLM_34 AUGUSTUS gene 1504603 1508517 1 + . ID=LTnewLM_340044700 LTnewLM_34 AUGUSTUS mRNA 1504603 1508517 1 + . ID=LTnewLM_340044700.1;Parent=LTnewLM_340044700 LTnewLM_34 AUGUSTUS CDS 1504603 1508517 1 + 0 ID=LTnewLM_340044700.1:CDS:1;Parent=LTnewLM_340044700.1 ### LTnewLM_34 . polypeptide 1504603 1508517 . + . ID=LTnewLM_340044700.1:pep;Derives_from=LTnewLM_340044700.1;orthologous_to=LmjF.34.3790_mRNA;ortholog_cluster=OG0005616;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 . pseudogene 1509365 1510517 . + . ID=LTnewLM_340044800:pseudogene;coverage=0.990;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.3800_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1509365 1510517 . + . ID=LTnewLM_340044800.1;Parent=LTnewLM_340044800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1509365 1510517 . + . ID=LTnewLM_340044800.1:pseudogenic_exon:1;Parent=LTnewLM_340044800.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1509365 1510517 . + . ID=LTnewLM_340044800.1:pep;Derives_from=LTnewLM_340044800.1;product=term%3Dhypothetical protein ### LTnewLM_34 AUGUSTUS gene 1511272 1511865 1 + . ID=LTnewLM_340044900 LTnewLM_34 AUGUSTUS mRNA 1511272 1511865 1 + . ID=LTnewLM_340044900.1;Parent=LTnewLM_340044900 LTnewLM_34 AUGUSTUS CDS 1511272 1511865 1 + 0 ID=LTnewLM_340044900.1:CDS:1;Parent=LTnewLM_340044900.1 ### LTnewLM_34 . polypeptide 1511272 1511865 . + . ID=LTnewLM_340044900.1:pep;Derives_from=LTnewLM_340044900.1;orthologous_to=LmjF.34.3810_mRNA;ortholog_cluster=OG0005617;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1512821 1513393 1 + . ID=LTnewLM_340045000 LTnewLM_34 AUGUSTUS mRNA 1512821 1513393 1 + . ID=LTnewLM_340045000.1;Parent=LTnewLM_340045000 LTnewLM_34 AUGUSTUS CDS 1512821 1513393 1 + 0 ID=LTnewLM_340045000.1:CDS:1;Parent=LTnewLM_340045000.1 ### LTnewLM_34 . polypeptide 1512821 1513393 . + . ID=LTnewLM_340045000.1:pep;Derives_from=LTnewLM_340045000.1;orthologous_to=LmjF.34.3815_mRNA;ortholog_cluster=OG0005618;product=term%3DRibosomal protein L14p/L23e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00238;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_34 Pfam protein_match 1513007 1513384 . + . Parent=LTnewLM_340045000.1:pep;Name=PF00238;signature_desc=Ribosomal protein L14p/L23e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_34 AUGUSTUS gene 1514261 1515130 1 + . ID=LTnewLM_340045100 LTnewLM_34 AUGUSTUS mRNA 1514261 1515130 1 + . ID=LTnewLM_340045100.1;Parent=LTnewLM_340045100 LTnewLM_34 AUGUSTUS CDS 1514261 1515130 1 + 0 ID=LTnewLM_340045100.1:CDS:1;Parent=LTnewLM_340045100.1 ### LTnewLM_34 . polypeptide 1514261 1515130 . + . ID=LTnewLM_340045100.1:pep;Derives_from=LTnewLM_340045100.1;orthologous_to=LmjF.34.3820_mRNA;ortholog_cluster=OG0005619;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1515897 1516598 1 + . ID=LTnewLM_340045200 LTnewLM_34 AUGUSTUS mRNA 1515897 1516598 1 + . ID=LTnewLM_340045200.1;Parent=LTnewLM_340045200 LTnewLM_34 AUGUSTUS CDS 1515897 1516598 1 + 0 ID=LTnewLM_340045200.1:CDS:1;Parent=LTnewLM_340045200.1 ### LTnewLM_34 . polypeptide 1515897 1516598 . + . ID=LTnewLM_340045200.1:pep;Derives_from=LTnewLM_340045200.1;orthologous_to=LmjF.34.3830_mRNA;ortholog_cluster=OG0005620;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1517461 1518240 1 + . ID=LTnewLM_340045300 LTnewLM_34 AUGUSTUS mRNA 1517461 1518240 1 + . ID=LTnewLM_340045300.1;Parent=LTnewLM_340045300 LTnewLM_34 AUGUSTUS CDS 1517461 1518240 1 + 0 ID=LTnewLM_340045300.1:CDS:1;Parent=LTnewLM_340045300.1 ### LTnewLM_34 . polypeptide 1517461 1518240 . + . ID=LTnewLM_340045300.1:pep;Derives_from=LTnewLM_340045300.1;orthologous_to=LmjF.34.3840_mRNA;ortholog_cluster=OG0005621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1519214 1519906 1 + . ID=LTnewLM_340045400 LTnewLM_34 AUGUSTUS mRNA 1519214 1519906 1 + . ID=LTnewLM_340045400.1;Parent=LTnewLM_340045400 LTnewLM_34 AUGUSTUS CDS 1519214 1519906 1 + 0 ID=LTnewLM_340045400.1:CDS:1;Parent=LTnewLM_340045400.1 ### LTnewLM_34 . polypeptide 1519214 1519906 . + . ID=LTnewLM_340045400.1:pep;Derives_from=LTnewLM_340045400.1;orthologous_to=LmjF.34.3850_mRNA;ortholog_cluster=OG0005622;product=term%3DMajor intrinsic protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00230;Ontology_term=GO:0006810,GO:0016020,GO:0005215 LTnewLM_34 Pfam protein_match 1519223 1519843 . + . Parent=LTnewLM_340045400.1:pep;Name=PF00230;signature_desc=Major intrinsic protein;Ontology_term=GO:0005215,GO:0006810,GO:0016020 ### LTnewLM_34 AUGUSTUS gene 1521349 1521690 1 + . ID=LTnewLM_340045500 LTnewLM_34 AUGUSTUS mRNA 1521349 1521690 1 + . ID=LTnewLM_340045500.1;Parent=LTnewLM_340045500 LTnewLM_34 AUGUSTUS CDS 1521349 1521690 1 + 0 ID=LTnewLM_340045500.1:CDS:1;Parent=LTnewLM_340045500.1 ### LTnewLM_34 . polypeptide 1521349 1521690 . + . ID=LTnewLM_340045500.1:pep;Derives_from=LTnewLM_340045500.1;orthologous_to=LmjF.34.3860_mRNA;ortholog_cluster=OG0005623;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_34 Pfam protein_match 1521382 1521561 . + . Parent=LTnewLM_340045500.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_34 AUGUSTUS gene 1522529 1524601 1 + . ID=LTnewLM_340045600 LTnewLM_34 AUGUSTUS mRNA 1522529 1524601 1 + . ID=LTnewLM_340045600.1;Parent=LTnewLM_340045600 LTnewLM_34 AUGUSTUS CDS 1522529 1524601 1 + 0 ID=LTnewLM_340045600.1:CDS:1;Parent=LTnewLM_340045600.1 ### LTnewLM_34 . polypeptide 1522529 1524601 . + . ID=LTnewLM_340045600.1:pep;Derives_from=LTnewLM_340045600.1;orthologous_to=LmjF.34.3870_mRNA;ortholog_cluster=OG0005624;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_34 Pfam protein_match 1524374 1524574 . + . Parent=LTnewLM_340045600.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_34 AUGUSTUS gene 1526395 1540332 1 + . ID=LTnewLM_340045700 LTnewLM_34 AUGUSTUS mRNA 1526395 1540332 1 + . ID=LTnewLM_340045700.1;Parent=LTnewLM_340045700 LTnewLM_34 AUGUSTUS CDS 1526395 1540332 1 + 0 ID=LTnewLM_340045700.1:CDS:1;Parent=LTnewLM_340045700.1 ### LTnewLM_34 . polypeptide 1526395 1540332 . + . ID=LTnewLM_340045700.1:pep;Derives_from=LTnewLM_340045700.1;orthologous_to=LmjF.34.3880_mRNA;ortholog_cluster=OG0005625;product=term%3DDynein heavy chain%2C N-terminal region 1/Dynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08385|Pfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_34 Pfam protein_match 1527259 1528953 . + . Parent=LTnewLM_340045700.1:pep;Name=PF08385;signature_desc=Dynein heavy chain%2C N-terminal region 1 LTnewLM_34 Pfam protein_match 1530490 1531701 . + . Parent=LTnewLM_340045700.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_34 Pfam protein_match 1532107 1533084 . + . Parent=LTnewLM_340045700.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_34 Pfam protein_match 1533055 1533462 . + . Parent=LTnewLM_340045700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 1533559 1533975 . + . Parent=LTnewLM_340045700.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_34 Pfam protein_match 1534000 1534587 . + . Parent=LTnewLM_340045700.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_34 Pfam protein_match 1534096 1534563 . + . Parent=LTnewLM_340045700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 1534687 1534905 . + . Parent=LTnewLM_340045700.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_34 Pfam protein_match 1535125 1535898 . + . Parent=LTnewLM_340045700.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_34 Pfam protein_match 1535950 1536948 . + . Parent=LTnewLM_340045700.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_34 Pfam protein_match 1537027 1537725 . + . Parent=LTnewLM_340045700.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_34 Pfam protein_match 1538482 1538820 . + . Parent=LTnewLM_340045700.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_34 Pfam protein_match 1538914 1539375 . + . Parent=LTnewLM_340045700.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_34 Pfam protein_match 1539400 1540314 . + . Parent=LTnewLM_340045700.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_34 AUGUSTUS gene 1541821 1542735 1 + . ID=LTnewLM_340045800 LTnewLM_34 AUGUSTUS mRNA 1541821 1542735 1 + . ID=LTnewLM_340045800.1;Parent=LTnewLM_340045800 LTnewLM_34 AUGUSTUS CDS 1541821 1542735 1 + 0 ID=LTnewLM_340045800.1:CDS:1;Parent=LTnewLM_340045800.1 ### LTnewLM_34 . polypeptide 1541821 1542735 . + . ID=LTnewLM_340045800.1:pep;Derives_from=LTnewLM_340045800.1;orthologous_to=LmjF.34.3890_mRNA;ortholog_cluster=OG0005626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1545819 1547324 1 + . ID=LTnewLM_340045900 LTnewLM_34 AUGUSTUS mRNA 1545819 1547324 1 + . ID=LTnewLM_340045900.1;Parent=LTnewLM_340045900 LTnewLM_34 AUGUSTUS CDS 1545819 1547324 1 + 0 ID=LTnewLM_340045900.1:CDS:1;Parent=LTnewLM_340045900.1 ### LTnewLM_34 . polypeptide 1545819 1547324 . + . ID=LTnewLM_340045900.1:pep;Derives_from=LTnewLM_340045900.1;orthologous_to=LmjF.34.3900_mRNA;ortholog_cluster=OG0005627;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02518 LTnewLM_34 Pfam protein_match 1546920 1547252 . + . Parent=LTnewLM_340045900.1:pep;Name=PF02518;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_34 AUGUSTUS gene 1548181 1548474 1 + . ID=LTnewLM_340046000 LTnewLM_34 AUGUSTUS mRNA 1548181 1548474 1 + . ID=LTnewLM_340046000.1;Parent=LTnewLM_340046000 LTnewLM_34 AUGUSTUS CDS 1548181 1548474 1 + 0 ID=LTnewLM_340046000.1:CDS:1;Parent=LTnewLM_340046000.1 ### LTnewLM_34 . polypeptide 1548181 1548474 . + . ID=LTnewLM_340046000.1:pep;Derives_from=LTnewLM_340046000.1;orthologous_to=LmjF.34.3910_mRNA;ortholog_cluster=OG0005628;product=term%3DCytochrome c oxidase assembly protein PET191%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10203 LTnewLM_34 Pfam protein_match 1548199 1548372 . + . Parent=LTnewLM_340046000.1:pep;Name=PF10203;signature_desc=Cytochrome c oxidase assembly protein PET191 ### LTnewLM_34 AUGUSTUS gene 1549841 1551421 1 + . ID=LTnewLM_340046100 LTnewLM_34 AUGUSTUS mRNA 1549841 1551421 1 + . ID=LTnewLM_340046100.1;Parent=LTnewLM_340046100 LTnewLM_34 AUGUSTUS CDS 1549841 1551421 1 + 0 ID=LTnewLM_340046100.1:CDS:1;Parent=LTnewLM_340046100.1 ### LTnewLM_34 . polypeptide 1549841 1551421 . + . ID=LTnewLM_340046100.1:pep;Derives_from=LTnewLM_340046100.1;orthologous_to=LmjF.34.3920_mRNA;ortholog_cluster=OG0005629;product=term%3DProtein of unknown function (DUF705)/NLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05152|Pfam:PF03031;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1550564 1550794 . + . Parent=LTnewLM_340046100.1:pep;Name=PF05152;signature_desc=Protein of unknown function (DUF705) LTnewLM_34 Pfam protein_match 1550573 1550992 . + . Parent=LTnewLM_340046100.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 1552396 1554042 1 + . ID=LTnewLM_340046200 LTnewLM_34 AUGUSTUS mRNA 1552396 1554042 1 + . ID=LTnewLM_340046200.1;Parent=LTnewLM_340046200 LTnewLM_34 AUGUSTUS CDS 1552396 1554042 1 + 0 ID=LTnewLM_340046200.1:CDS:1;Parent=LTnewLM_340046200.1 ### LTnewLM_34 . polypeptide 1552396 1554042 . + . ID=LTnewLM_340046200.1:pep;Derives_from=LTnewLM_340046200.1;orthologous_to=LmjF.34.3930_mRNA;ortholog_cluster=OG0005630;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1558253 1566139 1 + . ID=LTnewLM_340046300 LTnewLM_34 AUGUSTUS mRNA 1558253 1566139 1 + . ID=LTnewLM_340046300.1;Parent=LTnewLM_340046300 LTnewLM_34 AUGUSTUS CDS 1558253 1566139 1 + 0 ID=LTnewLM_340046300.1:CDS:1;Parent=LTnewLM_340046300.1 ### LTnewLM_34 . polypeptide 1558253 1566139 . + . ID=LTnewLM_340046300.1:pep;Derives_from=LTnewLM_340046300.1;orthologous_to=LmjF.34.3940_mRNA;ortholog_cluster=OG0005631;product=term%3DDomain of unknown function (DUF3385)/FAT domain/FKBP12-rapamycin binding domain/Phosphatidylinositol 3- and 4-kinase/FATC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11865|Pfam:PF02259|Pfam:PF08771|Pfam:PF00454|Pfam:PF02260;Ontology_term=GO:0005515,GO:0016773,GO:0008144 LTnewLM_34 Pfam protein_match 1560470 1560922 . + . Parent=LTnewLM_340046300.1:pep;Name=PF11865;signature_desc=Domain of unknown function (DUF3385) LTnewLM_34 Pfam protein_match 1563044 1563988 . + . Parent=LTnewLM_340046300.1:pep;Name=PF02259;signature_desc=FAT domain;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1564319 1564573 . + . Parent=LTnewLM_340046300.1:pep;Name=PF08771;signature_desc=FKBP12-rapamycin binding domain;Ontology_term=GO:0008144 LTnewLM_34 Pfam protein_match 1564784 1565539 . + . Parent=LTnewLM_340046300.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_34 Pfam protein_match 1566041 1566133 . + . Parent=LTnewLM_340046300.1:pep;Name=PF02260;signature_desc=FATC domain;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 1570537 1571349 1 + . ID=LTnewLM_340046400 LTnewLM_34 AUGUSTUS mRNA 1570537 1571349 1 + . ID=LTnewLM_340046400.1;Parent=LTnewLM_340046400 LTnewLM_34 AUGUSTUS CDS 1570537 1571349 1 + 0 ID=LTnewLM_340046400.1:CDS:1;Parent=LTnewLM_340046400.1 ### LTnewLM_34 . polypeptide 1570537 1571349 . + . ID=LTnewLM_340046400.1:pep;Derives_from=LTnewLM_340046400.1;orthologous_to=LmjF.34.3950_mRNA;ortholog_cluster=OG0005632;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1574251 1574586 1 + . ID=LTnewLM_340046500 LTnewLM_34 AUGUSTUS mRNA 1574251 1574586 1 + . ID=LTnewLM_340046500.1;Parent=LTnewLM_340046500 LTnewLM_34 AUGUSTUS CDS 1574251 1574586 1 + 0 ID=LTnewLM_340046500.1:CDS:1;Parent=LTnewLM_340046500.1 ### LTnewLM_34 . polypeptide 1574251 1574586 . + . ID=LTnewLM_340046500.1:pep;Derives_from=LTnewLM_340046500.1;product=term%3DPhosphatidylinositol N-acetylglucosaminyltransferase subunit Y%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15159 LTnewLM_34 Pfam protein_match 1574371 1574577 . + . Parent=LTnewLM_340046500.1:pep;Name=PF15159;signature_desc=Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y ### LTnewLM_34 Liftoff gene 1577334 1577618 . + . ID=LTnewLM_340046600;coverage=1.0;sequence_ID=0.947;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.3955_0 LTnewLM_34 Liftoff mRNA 1577334 1577618 . + . ID=LTnewLM_340046600.1;Parent=LTnewLM_340046600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1577334 1577618 . + 0 ID=LTnewLM_340046600.1:CDS:1;Parent=LTnewLM_340046600.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1577334 1577618 . + . ID=LTnewLM_340046600.1:pep;Derives_from=LTnewLM_340046600.1;orthologous_to=LmjF.34.3955_mRNA;ortholog_cluster=OG0005633;product=term%3DPhosphatidylinositol N-acetylglucosaminyltransferase subunit Y%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15159 LTnewLM_34 Pfam protein_match 1577412 1577609 . + . Parent=LTnewLM_340046600.1:pep;Name=PF15159;signature_desc=Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y ### LTnewLM_34 AUGUSTUS gene 1581039 1585148 1 + . ID=LTnewLM_340046700 LTnewLM_34 AUGUSTUS mRNA 1581039 1585148 1 + . ID=LTnewLM_340046700.1;Parent=LTnewLM_340046700 LTnewLM_34 AUGUSTUS CDS 1581039 1585148 1 + 0 ID=LTnewLM_340046700.1:CDS:1;Parent=LTnewLM_340046700.1 ### LTnewLM_34 . polypeptide 1581039 1585148 . + . ID=LTnewLM_340046700.1:pep;Derives_from=LTnewLM_340046700.1;orthologous_to=LmjF.34.3960_mRNA;ortholog_cluster=OG0005634;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_34 Pfam protein_match 1584282 1585142 . + . Parent=LTnewLM_340046700.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_34 AUGUSTUS gene 1586113 1588551 1 + . ID=LTnewLM_340046800 LTnewLM_34 AUGUSTUS mRNA 1586113 1588551 1 + . ID=LTnewLM_340046800.1;Parent=LTnewLM_340046800 LTnewLM_34 AUGUSTUS CDS 1586113 1588551 1 + 0 ID=LTnewLM_340046800.1:CDS:1;Parent=LTnewLM_340046800.1 ### LTnewLM_34 . polypeptide 1586113 1588551 . + . ID=LTnewLM_340046800.1:pep;Derives_from=LTnewLM_340046800.1;orthologous_to=LmjF.34.3970_mRNA;ortholog_cluster=OG0005635;product=term%3DAdaptin N terminal region/Adaptin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF02883;Ontology_term=GO:0030131,GO:0016192,GO:0006886,GO:0030117 LTnewLM_34 Pfam protein_match 1586200 1587855 . + . Parent=LTnewLM_340046800.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_34 Pfam protein_match 1588246 1588539 . + . Parent=LTnewLM_340046800.1:pep;Name=PF02883;signature_desc=Adaptin C-terminal domain;Ontology_term=GO:0006886,GO:0016192,GO:0030131 ### LTnewLM_34 AUGUSTUS gene 1589723 1590169 1 + . ID=LTnewLM_340046900 LTnewLM_34 AUGUSTUS mRNA 1589723 1590169 1 + . ID=LTnewLM_340046900.1;Parent=LTnewLM_340046900 LTnewLM_34 AUGUSTUS CDS 1589723 1590169 1 + 0 ID=LTnewLM_340046900.1:CDS:1;Parent=LTnewLM_340046900.1 ### LTnewLM_34 . polypeptide 1589723 1590169 . + . ID=LTnewLM_340046900.1:pep;Derives_from=LTnewLM_340046900.1;orthologous_to=LmjF.34.3980_mRNA;ortholog_cluster=OG0005636;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_34 Pfam protein_match 1589852 1590112 . + . Parent=LTnewLM_340046900.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_34 AUGUSTUS gene 1591527 1592963 1 + . ID=LTnewLM_340047000 LTnewLM_34 AUGUSTUS mRNA 1591527 1592963 1 + . ID=LTnewLM_340047000.1;Parent=LTnewLM_340047000 LTnewLM_34 AUGUSTUS CDS 1591527 1592963 1 + 0 ID=LTnewLM_340047000.1:CDS:1;Parent=LTnewLM_340047000.1 ### LTnewLM_34 . polypeptide 1591527 1592963 . + . ID=LTnewLM_340047000.1:pep;Derives_from=LTnewLM_340047000.1;orthologous_to=LmjF.34.3990_mRNA;ortholog_cluster=OG0005637;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1593414 1594934 1 + . ID=LTnewLM_340047100 LTnewLM_34 AUGUSTUS mRNA 1593414 1594934 1 + . ID=LTnewLM_340047100.1;Parent=LTnewLM_340047100 LTnewLM_34 AUGUSTUS CDS 1593414 1594934 1 + 0 ID=LTnewLM_340047100.1:CDS:1;Parent=LTnewLM_340047100.1 ### LTnewLM_34 . polypeptide 1593414 1594934 . + . ID=LTnewLM_340047100.1:pep;Derives_from=LTnewLM_340047100.1;orthologous_to=LmjF.34.4000_mRNA;ortholog_cluster=OG0005638;product=term%3DPeptidase family C78%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07910 LTnewLM_34 Pfam protein_match 1594320 1594898 . + . Parent=LTnewLM_340047100.1:pep;Name=PF07910;signature_desc=Peptidase family C78 ### LTnewLM_34 AUGUSTUS gene 1595524 1595838 1 + . ID=LTnewLM_340047200 LTnewLM_34 AUGUSTUS mRNA 1595524 1595838 1 + . ID=LTnewLM_340047200.1;Parent=LTnewLM_340047200 LTnewLM_34 AUGUSTUS CDS 1595524 1595838 1 + 0 ID=LTnewLM_340047200.1:CDS:1;Parent=LTnewLM_340047200.1 ### LTnewLM_34 . polypeptide 1595524 1595838 . + . ID=LTnewLM_340047200.1:pep;Derives_from=LTnewLM_340047200.1;orthologous_to=LmjF.34.4010_mRNA;ortholog_cluster=OG0005639;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1597083 1598072 1 + . ID=LTnewLM_340047300 LTnewLM_34 AUGUSTUS mRNA 1597083 1598072 1 + . ID=LTnewLM_340047300.1;Parent=LTnewLM_340047300 LTnewLM_34 AUGUSTUS CDS 1597083 1598072 1 + 0 ID=LTnewLM_340047300.1:CDS:1;Parent=LTnewLM_340047300.1 ### LTnewLM_34 . polypeptide 1597083 1598072 . + . ID=LTnewLM_340047300.1:pep;Derives_from=LTnewLM_340047300.1;orthologous_to=LmjF.34.4020_mRNA;ortholog_cluster=OG0005640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1598953 1599945 1 + . ID=LTnewLM_340047400 LTnewLM_34 AUGUSTUS mRNA 1598953 1599945 1 + . ID=LTnewLM_340047400.1;Parent=LTnewLM_340047400 LTnewLM_34 AUGUSTUS CDS 1598953 1599945 1 + 0 ID=LTnewLM_340047400.1:CDS:1;Parent=LTnewLM_340047400.1 ### LTnewLM_34 . polypeptide 1598953 1599945 . + . ID=LTnewLM_340047400.1:pep;Derives_from=LTnewLM_340047400.1;orthologous_to=LmjF.34.4030_mRNA;ortholog_cluster=OG0005641;product=term%3DPrenyltransferase and squalene oxidase repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00432;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 1599127 1599234 . + . Parent=LTnewLM_340047400.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 1599256 1599384 . + . Parent=LTnewLM_340047400.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 1599403 1599525 . + . Parent=LTnewLM_340047400.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 1599544 1599672 . + . Parent=LTnewLM_340047400.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_34 Pfam protein_match 1599688 1599819 . + . Parent=LTnewLM_340047400.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 ### LTnewLM_34 AUGUSTUS gene 1600580 1601836 1 + . ID=LTnewLM_340047500 LTnewLM_34 AUGUSTUS mRNA 1600580 1601836 1 + . ID=LTnewLM_340047500.1;Parent=LTnewLM_340047500 LTnewLM_34 AUGUSTUS CDS 1600580 1601836 1 + 0 ID=LTnewLM_340047500.1:CDS:1;Parent=LTnewLM_340047500.1 ### LTnewLM_34 . polypeptide 1600580 1601836 . + . ID=LTnewLM_340047500.1:pep;Derives_from=LTnewLM_340047500.1;orthologous_to=LmjF.34.4040_mRNA;ortholog_cluster=OG0005642;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1602676 1604673 1 + . ID=LTnewLM_340047600 LTnewLM_34 AUGUSTUS mRNA 1602676 1604673 1 + . ID=LTnewLM_340047600.1;Parent=LTnewLM_340047600 LTnewLM_34 AUGUSTUS CDS 1602676 1604673 1 + 0 ID=LTnewLM_340047600.1:CDS:1;Parent=LTnewLM_340047600.1 ### LTnewLM_34 . polypeptide 1602676 1604673 . + . ID=LTnewLM_340047600.1:pep;Derives_from=LTnewLM_340047600.1;orthologous_to=LmjF.34.4050_mRNA;ortholog_cluster=OG0005643;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1606295 1609015 1 + . ID=LTnewLM_340047700 LTnewLM_34 AUGUSTUS mRNA 1606295 1609015 1 + . ID=LTnewLM_340047700.1;Parent=LTnewLM_340047700 LTnewLM_34 AUGUSTUS CDS 1606295 1609015 1 + 0 ID=LTnewLM_340047700.1:CDS:1;Parent=LTnewLM_340047700.1 ### LTnewLM_34 . polypeptide 1606295 1609015 . + . ID=LTnewLM_340047700.1:pep;Derives_from=LTnewLM_340047700.1;orthologous_to=LmjF.34.4060_mRNA;ortholog_cluster=OG0005644;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13423|Pfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_34 Pfam protein_match 1606310 1607161 . + . Parent=LTnewLM_340047700.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase LTnewLM_34 Pfam protein_match 1606310 1607227 . + . Parent=LTnewLM_340047700.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_34 AUGUSTUS gene 1610498 1612567 1 + . ID=LTnewLM_340047800 LTnewLM_34 AUGUSTUS mRNA 1610498 1612567 1 + . ID=LTnewLM_340047800.1;Parent=LTnewLM_340047800 LTnewLM_34 AUGUSTUS CDS 1610498 1612567 1 + 0 ID=LTnewLM_340047800.1:CDS:1;Parent=LTnewLM_340047800.1 ### LTnewLM_34 . polypeptide 1610498 1612567 . + . ID=LTnewLM_340047800.1:pep;Derives_from=LTnewLM_340047800.1;orthologous_to=LmjF.34.4070_mRNA;ortholog_cluster=OG0005645;product=term%3DCancer susceptibility candidate 1 N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15927 LTnewLM_34 Pfam protein_match 1610594 1611298 . + . Parent=LTnewLM_340047800.1:pep;Name=PF15927;signature_desc=Cancer susceptibility candidate 1 N-terminus ### LTnewLM_34 AUGUSTUS gene 1613920 1614720 1 + . ID=LTnewLM_340047900 LTnewLM_34 AUGUSTUS mRNA 1613920 1614720 1 + . ID=LTnewLM_340047900.1;Parent=LTnewLM_340047900 LTnewLM_34 AUGUSTUS CDS 1613920 1614720 1 + 0 ID=LTnewLM_340047900.1:CDS:1;Parent=LTnewLM_340047900.1 ### LTnewLM_34 . polypeptide 1613920 1614720 . + . ID=LTnewLM_340047900.1:pep;Derives_from=LTnewLM_340047900.1;orthologous_to=LmjF.34.4080_mRNA;ortholog_cluster=OG0005646;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1616090 1617556 1 + . ID=LTnewLM_340048000 LTnewLM_34 AUGUSTUS mRNA 1616090 1617556 1 + . ID=LTnewLM_340048000.1;Parent=LTnewLM_340048000 LTnewLM_34 AUGUSTUS CDS 1616090 1617556 1 + 0 ID=LTnewLM_340048000.1:CDS:1;Parent=LTnewLM_340048000.1 ### LTnewLM_34 . polypeptide 1616090 1617556 . + . ID=LTnewLM_340048000.1:pep;Derives_from=LTnewLM_340048000.1;orthologous_to=LmjF.34.4090_mRNA;ortholog_cluster=OG0005647;product=term%3DGRIP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01465;Ontology_term=GO:0000042,GO:0005515 LTnewLM_34 Pfam protein_match 1617404 1617532 . + . Parent=LTnewLM_340048000.1:pep;Name=PF01465;signature_desc=GRIP domain;Ontology_term=GO:0005515,GO:0000042 ### LTnewLM_34 AUGUSTUS gene 1619067 1619993 1 + . ID=LTnewLM_340048100 LTnewLM_34 AUGUSTUS mRNA 1619067 1619993 1 + . ID=LTnewLM_340048100.1;Parent=LTnewLM_340048100 LTnewLM_34 AUGUSTUS CDS 1619067 1619993 1 + 0 ID=LTnewLM_340048100.1:CDS:1;Parent=LTnewLM_340048100.1 ### LTnewLM_34 . polypeptide 1619067 1619993 . + . ID=LTnewLM_340048100.1:pep;Derives_from=LTnewLM_340048100.1;orthologous_to=LmjF.34.4100_mRNA;ortholog_cluster=OG0005648;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1620591 1628390 1 + . ID=LTnewLM_340048200 LTnewLM_34 AUGUSTUS mRNA 1620591 1628390 1 + . ID=LTnewLM_340048200.1;Parent=LTnewLM_340048200 LTnewLM_34 AUGUSTUS CDS 1620591 1628390 1 + 0 ID=LTnewLM_340048200.1:CDS:1;Parent=LTnewLM_340048200.1 ### LTnewLM_34 . polypeptide 1620591 1628390 . + . ID=LTnewLM_340048200.1:pep;Derives_from=LTnewLM_340048200.1;orthologous_to=LmjF.34.4110_mRNA;ortholog_cluster=OG0005649;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 Liftoff gene 1629200 1630138 . + . ID=LTnewLM_340048300;coverage=1.0;sequence_ID=0.938;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.34.4120_0 LTnewLM_34 Liftoff mRNA 1629200 1630138 . + . ID=LTnewLM_340048300.1;Parent=LTnewLM_340048300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_34 Liftoff CDS 1629200 1630138 . + 0 ID=LTnewLM_340048300.1:CDS:1;Parent=LTnewLM_340048300.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1629200 1630138 . + . ID=LTnewLM_340048300.1:pep;Derives_from=LTnewLM_340048300.1;orthologous_to=LmjF.34.4120_mRNA;ortholog_cluster=OG0005650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1631135 1633582 1 + . ID=LTnewLM_340048400 LTnewLM_34 AUGUSTUS mRNA 1631135 1633582 1 + . ID=LTnewLM_340048400.1;Parent=LTnewLM_340048400 LTnewLM_34 AUGUSTUS CDS 1631135 1633582 1 + 0 ID=LTnewLM_340048400.1:CDS:1;Parent=LTnewLM_340048400.1 ### LTnewLM_34 . polypeptide 1631135 1633582 . + . ID=LTnewLM_340048400.1:pep;Derives_from=LTnewLM_340048400.1;orthologous_to=LmjF.34.4130_mRNA;ortholog_cluster=OG0005651;product=term%3DER membrane protein complex subunit 1%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07774 LTnewLM_34 Pfam protein_match 1632914 1633573 . + . Parent=LTnewLM_340048400.1:pep;Name=PF07774;signature_desc=ER membrane protein complex subunit 1%2C C-terminal ### LTnewLM_34 AUGUSTUS gene 1634831 1636228 1 + . ID=LTnewLM_340048500 LTnewLM_34 AUGUSTUS mRNA 1634831 1636228 1 + . ID=LTnewLM_340048500.1;Parent=LTnewLM_340048500 LTnewLM_34 AUGUSTUS CDS 1634831 1636228 1 + 0 ID=LTnewLM_340048500.1:CDS:1;Parent=LTnewLM_340048500.1 ### LTnewLM_34 . polypeptide 1634831 1636228 . + . ID=LTnewLM_340048500.1:pep;Derives_from=LTnewLM_340048500.1;orthologous_to=LmjF.34.4140_mRNA;ortholog_cluster=OG0005652;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1637218 1639194 1 + . ID=LTnewLM_340048600 LTnewLM_34 AUGUSTUS mRNA 1637218 1639194 1 + . ID=LTnewLM_340048600.1;Parent=LTnewLM_340048600 LTnewLM_34 AUGUSTUS CDS 1637218 1639194 1 + 0 ID=LTnewLM_340048600.1:CDS:1;Parent=LTnewLM_340048600.1 ### LTnewLM_34 . polypeptide 1637218 1639194 . + . ID=LTnewLM_340048600.1:pep;Derives_from=LTnewLM_340048600.1;orthologous_to=LmjF.34.4150_mRNA;ortholog_cluster=OG0005653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1640321 1653046 1 + . ID=LTnewLM_340048700 LTnewLM_34 AUGUSTUS mRNA 1640321 1653046 1 + . ID=LTnewLM_340048700.1;Parent=LTnewLM_340048700 LTnewLM_34 AUGUSTUS CDS 1640321 1653046 1 + 0 ID=LTnewLM_340048700.1:CDS:1;Parent=LTnewLM_340048700.1 ### LTnewLM_34 . polypeptide 1640321 1653046 . + . ID=LTnewLM_340048700.1:pep;Derives_from=LTnewLM_340048700.1;orthologous_to=LTnewLM_270023700.1,LmjF.27.1750_mRNA,LmjF.34.4160_mRNA;ortholog_cluster=OG0000243;product=term%3DDynein heavy chain%2C N-terminal region 1/Dynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/AAA domain (dynein-related subfamily)/P-loop containing dynein motor region/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain AAA lid domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08385|Pfam:PF08393|Pfam:PF12774|Pfam:PF07728|Pfam:PF12775|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0007018,GO:0005524,GO:0016887,GO:0003777,GO:0030286 LTnewLM_34 Pfam protein_match 1640930 1642261 . + . Parent=LTnewLM_340048700.1:pep;Name=PF08385;signature_desc=Dynein heavy chain%2C N-terminal region 1 LTnewLM_34 Pfam protein_match 1643585 1644772 . + . Parent=LTnewLM_340048700.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_34 Pfam protein_match 1645148 1646179 . + . Parent=LTnewLM_340048700.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_34 Pfam protein_match 1646144 1646551 . + . Parent=LTnewLM_340048700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_34 Pfam protein_match 1647074 1647517 . + . Parent=LTnewLM_340048700.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_34 Pfam protein_match 1648040 1648702 . + . Parent=LTnewLM_340048700.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_34 Pfam protein_match 1648808 1649779 . + . Parent=LTnewLM_340048700.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_34 Pfam protein_match 1649888 1650547 . + . Parent=LTnewLM_340048700.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_34 Pfam protein_match 1651274 1651603 . + . Parent=LTnewLM_340048700.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_34 Pfam protein_match 1651697 1652104 . + . Parent=LTnewLM_340048700.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_34 Pfam protein_match 1652258 1653031 . + . Parent=LTnewLM_340048700.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_34 AUGUSTUS gene 1654214 1654663 1 + . ID=LTnewLM_340048800 LTnewLM_34 AUGUSTUS mRNA 1654214 1654663 1 + . ID=LTnewLM_340048800.1;Parent=LTnewLM_340048800 LTnewLM_34 AUGUSTUS CDS 1654214 1654663 1 + 0 ID=LTnewLM_340048800.1:CDS:1;Parent=LTnewLM_340048800.1 ### LTnewLM_34 . polypeptide 1654214 1654663 . + . ID=LTnewLM_340048800.1:pep;Derives_from=LTnewLM_340048800.1;orthologous_to=LmjF.34.4170_mRNA;ortholog_cluster=OG0005654;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13917 LTnewLM_34 Pfam protein_match 1654265 1654405 . + . Parent=LTnewLM_340048800.1:pep;Name=PF13917;signature_desc=Zinc knuckle ### LTnewLM_34 AUGUSTUS gene 1655434 1657188 1 + . ID=LTnewLM_340048900 LTnewLM_34 AUGUSTUS mRNA 1655434 1657188 1 + . ID=LTnewLM_340048900.1;Parent=LTnewLM_340048900 LTnewLM_34 AUGUSTUS CDS 1655434 1657188 1 + 0 ID=LTnewLM_340048900.1:CDS:1;Parent=LTnewLM_340048900.1 ### LTnewLM_34 . polypeptide 1655434 1657188 . + . ID=LTnewLM_340048900.1:pep;Derives_from=LTnewLM_340048900.1;orthologous_to=LmjF.34.4180_mRNA;ortholog_cluster=OG0005655;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1658394 1659323 1 + . ID=LTnewLM_340049000 LTnewLM_34 AUGUSTUS mRNA 1658394 1659323 1 + . ID=LTnewLM_340049000.1;Parent=LTnewLM_340049000 LTnewLM_34 AUGUSTUS CDS 1658394 1659323 1 + 0 ID=LTnewLM_340049000.1:CDS:1;Parent=LTnewLM_340049000.1 ### LTnewLM_34 . polypeptide 1658394 1659323 . + . ID=LTnewLM_340049000.1:pep;Derives_from=LTnewLM_340049000.1;orthologous_to=LmjF.34.4190_mRNA;ortholog_cluster=OG0005656;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_34 Pfam protein_match 1658523 1659107 . + . Parent=LTnewLM_340049000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_34 AUGUSTUS gene 1660185 1660850 1 + . ID=LTnewLM_340049100 LTnewLM_34 AUGUSTUS mRNA 1660185 1660850 1 + . ID=LTnewLM_340049100.1;Parent=LTnewLM_340049100 LTnewLM_34 AUGUSTUS CDS 1660185 1660850 1 + 0 ID=LTnewLM_340049100.1:CDS:1;Parent=LTnewLM_340049100.1 ### LTnewLM_34 . polypeptide 1660185 1660850 . + . ID=LTnewLM_340049100.1:pep;Derives_from=LTnewLM_340049100.1;orthologous_to=LmjF.34.4200_mRNA;ortholog_cluster=OG0005657;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1661391 1662857 1 + . ID=LTnewLM_340049200 LTnewLM_34 AUGUSTUS mRNA 1661391 1662857 1 + . ID=LTnewLM_340049200.1;Parent=LTnewLM_340049200 LTnewLM_34 AUGUSTUS CDS 1661391 1662857 1 + 0 ID=LTnewLM_340049200.1:CDS:1;Parent=LTnewLM_340049200.1 ### LTnewLM_34 . polypeptide 1661391 1662857 . + . ID=LTnewLM_340049200.1:pep;Derives_from=LTnewLM_340049200.1;orthologous_to=LmjF.34.4210_mRNA;ortholog_cluster=OG0005658;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1663997 1664608 1 + . ID=LTnewLM_340049300 LTnewLM_34 AUGUSTUS mRNA 1663997 1664608 1 + . ID=LTnewLM_340049300.1;Parent=LTnewLM_340049300 LTnewLM_34 AUGUSTUS CDS 1663997 1664608 1 + 0 ID=LTnewLM_340049300.1:CDS:1;Parent=LTnewLM_340049300.1 ### LTnewLM_34 . polypeptide 1663997 1664608 . + . ID=LTnewLM_340049300.1:pep;Derives_from=LTnewLM_340049300.1;orthologous_to=LmjF.34.4220_mRNA;ortholog_cluster=OG0005659;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1665399 1665695 1 + . ID=LTnewLM_340049400 LTnewLM_34 AUGUSTUS mRNA 1665399 1665695 1 + . ID=LTnewLM_340049400.1;Parent=LTnewLM_340049400 LTnewLM_34 AUGUSTUS CDS 1665399 1665695 1 + 0 ID=LTnewLM_340049400.1:CDS:1;Parent=LTnewLM_340049400.1 ### LTnewLM_34 . polypeptide 1665399 1665695 . + . ID=LTnewLM_340049400.1:pep;Derives_from=LTnewLM_340049400.1;orthologous_to=LmjF.34.4230_mRNA;ortholog_cluster=OG0005660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1666478 1667710 1 + . ID=LTnewLM_340049500 LTnewLM_34 AUGUSTUS mRNA 1666478 1667710 1 + . ID=LTnewLM_340049500.1;Parent=LTnewLM_340049500 LTnewLM_34 AUGUSTUS CDS 1666478 1667710 1 + 0 ID=LTnewLM_340049500.1:CDS:1;Parent=LTnewLM_340049500.1 ### LTnewLM_34 . polypeptide 1666478 1667710 . + . ID=LTnewLM_340049500.1:pep;Derives_from=LTnewLM_340049500.1;orthologous_to=LmjF.34.4240_mRNA;ortholog_cluster=OG0005661;product=term%3DFHA domain/BRCA1 C Terminus (BRCT) domain/twin BRCT domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498|Pfam:PF00533|Pfam:PF12738;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1666547 1666777 . + . Parent=LTnewLM_340049500.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1667207 1667398 . + . Parent=LTnewLM_340049500.1:pep;Name=PF00533;signature_desc=BRCA1 C Terminus (BRCT) domain LTnewLM_34 Pfam protein_match 1667210 1667392 . + . Parent=LTnewLM_340049500.1:pep;Name=PF12738;signature_desc=twin BRCT domain ### LTnewLM_34 AUGUSTUS gene 1668334 1670112 1 + . ID=LTnewLM_340049600 LTnewLM_34 AUGUSTUS mRNA 1668334 1670112 1 + . ID=LTnewLM_340049600.1;Parent=LTnewLM_340049600 LTnewLM_34 AUGUSTUS CDS 1668334 1670112 1 + 0 ID=LTnewLM_340049600.1:CDS:1;Parent=LTnewLM_340049600.1 ### LTnewLM_34 . polypeptide 1668334 1670112 . + . ID=LTnewLM_340049600.1:pep;Derives_from=LTnewLM_340049600.1;orthologous_to=LmjF.34.4250_mRNA;ortholog_cluster=OG0005662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1670586 1675052 1 + . ID=LTnewLM_340049700 LTnewLM_34 AUGUSTUS mRNA 1670586 1675052 1 + . ID=LTnewLM_340049700.1;Parent=LTnewLM_340049700 LTnewLM_34 AUGUSTUS CDS 1670586 1675052 1 + 0 ID=LTnewLM_340049700.1:CDS:1;Parent=LTnewLM_340049700.1 ### LTnewLM_34 . polypeptide 1670586 1675052 . + . ID=LTnewLM_340049700.1:pep;Derives_from=LTnewLM_340049700.1;orthologous_to=LmjF.34.4260_mRNA;ortholog_cluster=OG0005663;product=term%3DKinesin motor domain/Microtubule binding/Integral peroxisomal membrane peroxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796|Pfam:PF06398;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_34 Pfam protein_match 1670607 1671620 . + . Parent=LTnewLM_340049700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_34 Pfam protein_match 1670784 1671047 . + . Parent=LTnewLM_340049700.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_34 Pfam protein_match 1674681 1674977 . + . Parent=LTnewLM_340049700.1:pep;Name=PF06398;signature_desc=Integral peroxisomal membrane peroxin ### LTnewLM_34 AUGUSTUS gene 1676169 1676879 1 + . ID=LTnewLM_340049800 LTnewLM_34 AUGUSTUS mRNA 1676169 1676879 1 + . ID=LTnewLM_340049800.1;Parent=LTnewLM_340049800 LTnewLM_34 AUGUSTUS CDS 1676169 1676879 1 + 0 ID=LTnewLM_340049800.1:CDS:1;Parent=LTnewLM_340049800.1 ### LTnewLM_34 . polypeptide 1676169 1676879 . + . ID=LTnewLM_340049800.1:pep;Derives_from=LTnewLM_340049800.1;orthologous_to=LmjF.34.4270_mRNA;ortholog_cluster=OG0005664;product=term%3DCullin binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03556 LTnewLM_34 Pfam protein_match 1676517 1676852 . + . Parent=LTnewLM_340049800.1:pep;Name=PF03556;signature_desc=Cullin binding ### LTnewLM_34 . pseudogene 1678352 1679568 . + . ID=LTnewLM_340049900:pseudogene;coverage=0.999;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.34.4280_0;has_internal_stop=true LTnewLM_34 . pseudogenic_transcript 1678352 1679568 . + . ID=LTnewLM_340049900.1;Parent=LTnewLM_340049900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_34 . pseudogenic_exon 1678352 1679568 . + . ID=LTnewLM_340049900.1:pseudogenic_exon:1;Parent=LTnewLM_340049900.1;extra_copy_number=0 ### LTnewLM_34 . polypeptide 1678352 1679568 . + . ID=LTnewLM_340049900.1:pep;Derives_from=LTnewLM_340049900.1;orthologous_to=LmjF.34.4280_mRNA;ortholog_cluster=OG0007649;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeats (3 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637|Pfam:PF12796 LTnewLM_34 Pfam protein_match 1678583 1678735 . + . Parent=LTnewLM_340049900.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_34 Pfam protein_match 1678622 1678861 . + . Parent=LTnewLM_340049900.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_34 AUGUSTUS gene 1680752 1681390 1 + . ID=LTnewLM_340050000 LTnewLM_34 AUGUSTUS mRNA 1680752 1681390 1 + . ID=LTnewLM_340050000.1;Parent=LTnewLM_340050000 LTnewLM_34 AUGUSTUS CDS 1680752 1681390 1 + 0 ID=LTnewLM_340050000.1:CDS:1;Parent=LTnewLM_340050000.1 ### LTnewLM_34 . polypeptide 1680752 1681390 . + . ID=LTnewLM_340050000.1:pep;Derives_from=LTnewLM_340050000.1;orthologous_to=LmjF.34.4290_mRNA;ortholog_cluster=OG0005665;product=term%3DGar1/Naf1 RNA binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04410;Ontology_term=GO:0042254,GO:0001522 LTnewLM_34 Pfam protein_match 1680896 1681147 . + . Parent=LTnewLM_340050000.1:pep;Name=PF04410;signature_desc=Gar1/Naf1 RNA binding region;Ontology_term=GO:0001522,GO:0042254 ### LTnewLM_34 AUGUSTUS gene 1682407 1683207 1 + . ID=LTnewLM_340050100 LTnewLM_34 AUGUSTUS mRNA 1682407 1683207 1 + . ID=LTnewLM_340050100.1;Parent=LTnewLM_340050100 LTnewLM_34 AUGUSTUS CDS 1682407 1683207 1 + 0 ID=LTnewLM_340050100.1:CDS:1;Parent=LTnewLM_340050100.1 ### LTnewLM_34 . polypeptide 1682407 1683207 . + . ID=LTnewLM_340050100.1:pep;Derives_from=LTnewLM_340050100.1;orthologous_to=LmjF.34.4300_mRNA;ortholog_cluster=OG0005666;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_34 Pfam protein_match 1682719 1683078 . + . Parent=LTnewLM_340050100.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_34 AUGUSTUS gene 1684637 1688227 1 + . ID=LTnewLM_340050200 LTnewLM_34 AUGUSTUS mRNA 1684637 1688227 1 + . ID=LTnewLM_340050200.1;Parent=LTnewLM_340050200 LTnewLM_34 AUGUSTUS CDS 1684637 1688227 1 + 0 ID=LTnewLM_340050200.1:CDS:1;Parent=LTnewLM_340050200.1 ### LTnewLM_34 . polypeptide 1684637 1688227 . + . ID=LTnewLM_340050200.1:pep;Derives_from=LTnewLM_340050200.1;orthologous_to=LmjF.34.4310_mRNA;ortholog_cluster=OG0005667;product=term%3DWD domain%2C G-beta repeat/Coatomer WD associated region/Coatomer (COPI) alpha subunit C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF04053|Pfam:PF06957;Ontology_term=GO:0005198,GO:0030117,GO:0030126,GO:0005515,GO:0006886,GO:0016192 LTnewLM_34 Pfam protein_match 1684760 1684870 . + . Parent=LTnewLM_340050200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1684886 1684996 . + . Parent=LTnewLM_340050200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1685018 1685122 . + . Parent=LTnewLM_340050200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1685207 1685302 . + . Parent=LTnewLM_340050200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1685336 1685428 . + . Parent=LTnewLM_340050200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1685642 1686880 . + . Parent=LTnewLM_340050200.1:pep;Name=PF04053;signature_desc=Coatomer WD associated region;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030117 LTnewLM_34 Pfam protein_match 1687088 1688212 . + . Parent=LTnewLM_340050200.1:pep;Name=PF06957;signature_desc=Coatomer (COPI) alpha subunit C-terminus;Ontology_term=GO:0005198,GO:0005515,GO:0006886,GO:0016192,GO:0030126 ### LTnewLM_34 AUGUSTUS gene 1689278 1689616 1 + . ID=LTnewLM_340050300 LTnewLM_34 AUGUSTUS mRNA 1689278 1689616 1 + . ID=LTnewLM_340050300.1;Parent=LTnewLM_340050300 LTnewLM_34 AUGUSTUS CDS 1689278 1689616 1 + 0 ID=LTnewLM_340050300.1:CDS:1;Parent=LTnewLM_340050300.1 ### LTnewLM_34 . polypeptide 1689278 1689616 . + . ID=LTnewLM_340050300.1:pep;Derives_from=LTnewLM_340050300.1;orthologous_to=LmjF.34.4320_mRNA,LmjF.34.4350_mRNA,LmjF.34.4380_mRNA,LmjF.34.4410_mRNA,LmjF.34.4440_mRNA,LmjF.34.4470_mRNA,LmjF.34.4500_mRNA;ortholog_cluster=OG0000034;product=term%3DESSS subunit of NADH:ubiquinone oxidoreductase (complex I)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10183 LTnewLM_34 Pfam protein_match 1689380 1689577 . + . Parent=LTnewLM_340050300.1:pep;Name=PF10183;signature_desc=ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ### LTnewLM_34 AUGUSTUS gene 1690197 1690859 1 + . ID=LTnewLM_340050400 LTnewLM_34 AUGUSTUS mRNA 1690197 1690859 1 + . ID=LTnewLM_340050400.1;Parent=LTnewLM_340050400 LTnewLM_34 AUGUSTUS CDS 1690197 1690859 1 + 0 ID=LTnewLM_340050400.1:CDS:1;Parent=LTnewLM_340050400.1 ### LTnewLM_34 . polypeptide 1690197 1690859 . + . ID=LTnewLM_340050400.1:pep;Derives_from=LTnewLM_340050400.1;orthologous_to=LTnewLM_340050700.1,LmjF.34.4340_mRNA,LmjF.34.4370_mRNA,LmjF.34.4400_mRNA,LmjF.34.4430_mRNA,LmjF.34.4460_mRNA,LmjF.34.4490_mRNA,LmjF.34.4520_mRNA;ortholog_cluster=OG0000021;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_34 Pfam protein_match 1690197 1690754 . + . Parent=LTnewLM_340050400.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_34 AUGUSTUS gene 1691566 1691904 1 + . ID=LTnewLM_340050500 LTnewLM_34 AUGUSTUS mRNA 1691566 1691904 1 + . ID=LTnewLM_340050500.1;Parent=LTnewLM_340050500 LTnewLM_34 AUGUSTUS CDS 1691566 1691904 1 + 0 ID=LTnewLM_340050500.1:CDS:1;Parent=LTnewLM_340050500.1 ### LTnewLM_34 . polypeptide 1691566 1691904 . + . ID=LTnewLM_340050500.1:pep;Derives_from=LTnewLM_340050500.1;product=term%3DESSS subunit of NADH:ubiquinone oxidoreductase (complex I)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10183 LTnewLM_34 Pfam protein_match 1691668 1691865 . + . Parent=LTnewLM_340050500.1:pep;Name=PF10183;signature_desc=ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ### LTnewLM_34 AUGUSTUS gene 1692470 1693159 1 + . ID=LTnewLM_340050600 LTnewLM_34 AUGUSTUS mRNA 1692470 1693159 1 + . ID=LTnewLM_340050600.1;Parent=LTnewLM_340050600 LTnewLM_34 AUGUSTUS CDS 1692470 1693159 1 + 0 ID=LTnewLM_340050600.1:CDS:1;Parent=LTnewLM_340050600.1 ### LTnewLM_34 . polypeptide 1692470 1693159 . + . ID=LTnewLM_340050600.1:pep;Derives_from=LTnewLM_340050600.1;orthologous_to=LmjF.34.4360_mRNA,LmjF.34.4390_mRNA,LmjF.34.4420_mRNA,LmjF.34.4450_mRNA,LmjF.34.4480_mRNA,LmjF.34.4510_mRNA;ortholog_cluster=OG0000044;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_34 Pfam protein_match 1692473 1693009 . + . Parent=LTnewLM_340050600.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_34 Pfam protein_match 1692491 1693009 . + . Parent=LTnewLM_340050600.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_34 AUGUSTUS gene 1693688 1694350 1 + . ID=LTnewLM_340050700 LTnewLM_34 AUGUSTUS mRNA 1693688 1694350 1 + . ID=LTnewLM_340050700.1;Parent=LTnewLM_340050700 LTnewLM_34 AUGUSTUS CDS 1693688 1694350 1 + 0 ID=LTnewLM_340050700.1:CDS:1;Parent=LTnewLM_340050700.1 ### LTnewLM_34 . polypeptide 1693688 1694350 . + . ID=LTnewLM_340050700.1:pep;Derives_from=LTnewLM_340050700.1;orthologous_to=LTnewLM_340050400.1,LmjF.34.4340_mRNA,LmjF.34.4370_mRNA,LmjF.34.4400_mRNA,LmjF.34.4430_mRNA,LmjF.34.4460_mRNA,LmjF.34.4490_mRNA,LmjF.34.4520_mRNA;ortholog_cluster=OG0000021;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_34 Pfam protein_match 1693688 1694245 . + . Parent=LTnewLM_340050700.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_34 AUGUSTUS gene 1695863 1703179 1 + . ID=LTnewLM_340050800 LTnewLM_34 AUGUSTUS mRNA 1695863 1703179 1 + . ID=LTnewLM_340050800.1;Parent=LTnewLM_340050800 LTnewLM_34 AUGUSTUS CDS 1695863 1703179 1 + 0 ID=LTnewLM_340050800.1:CDS:1;Parent=LTnewLM_340050800.1 ### LTnewLM_34 . polypeptide 1695863 1703179 . + . ID=LTnewLM_340050800.1:pep;Derives_from=LTnewLM_340050800.1;orthologous_to=LmjF.34.4530_mRNA;ortholog_cluster=OG0005668;product=term%3DDomain of unknown function (DUF3385)/FAT domain/FKBP12-rapamycin binding domain/Phosphatidylinositol 3- and 4-kinase/FATC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11865|Pfam:PF02259|Pfam:PF08771|Pfam:PF00454|Pfam:PF02260;Ontology_term=GO:0005515,GO:0016773,GO:0008144 LTnewLM_34 Pfam protein_match 1698065 1698517 . + . Parent=LTnewLM_340050800.1:pep;Name=PF11865;signature_desc=Domain of unknown function (DUF3385) LTnewLM_34 Pfam protein_match 1700282 1701220 . + . Parent=LTnewLM_340050800.1:pep;Name=PF02259;signature_desc=FAT domain;Ontology_term=GO:0005515 LTnewLM_34 Pfam protein_match 1701542 1701835 . + . Parent=LTnewLM_340050800.1:pep;Name=PF08771;signature_desc=FKBP12-rapamycin binding domain;Ontology_term=GO:0008144 LTnewLM_34 Pfam protein_match 1702049 1702807 . + . Parent=LTnewLM_340050800.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_34 Pfam protein_match 1703081 1703173 . + . Parent=LTnewLM_340050800.1:pep;Name=PF02260;signature_desc=FATC domain;Ontology_term=GO:0005515 ### LTnewLM_34 AUGUSTUS gene 1704128 1704454 1 + . ID=LTnewLM_340050900 LTnewLM_34 AUGUSTUS mRNA 1704128 1704454 1 + . ID=LTnewLM_340050900.1;Parent=LTnewLM_340050900 LTnewLM_34 AUGUSTUS CDS 1704128 1704454 1 + 0 ID=LTnewLM_340050900.1:CDS:1;Parent=LTnewLM_340050900.1 ### LTnewLM_34 . polypeptide 1704128 1704454 . + . ID=LTnewLM_340050900.1:pep;Derives_from=LTnewLM_340050900.1;orthologous_to=LmjF.34.4540_mRNA;ortholog_cluster=OG0005669;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1704999 1706075 1 + . ID=LTnewLM_340051000 LTnewLM_34 AUGUSTUS mRNA 1704999 1706075 1 + . ID=LTnewLM_340051000.1;Parent=LTnewLM_340051000 LTnewLM_34 AUGUSTUS CDS 1704999 1706075 1 + 0 ID=LTnewLM_340051000.1:CDS:1;Parent=LTnewLM_340051000.1 ### LTnewLM_34 . polypeptide 1704999 1706075 . + . ID=LTnewLM_340051000.1:pep;Derives_from=LTnewLM_340051000.1;orthologous_to=LmjF.34.4550_mRNA;ortholog_cluster=OG0005670;product=term%3DCell differentiation family%2C Rcd1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04078 LTnewLM_34 Pfam protein_match 1705236 1706021 . + . Parent=LTnewLM_340051000.1:pep;Name=PF04078;signature_desc=Cell differentiation family%2C Rcd1-like ### LTnewLM_34 AUGUSTUS gene 1707167 1708339 1 + . ID=LTnewLM_340051100 LTnewLM_34 AUGUSTUS mRNA 1707167 1708339 1 + . ID=LTnewLM_340051100.1;Parent=LTnewLM_340051100 LTnewLM_34 AUGUSTUS CDS 1707167 1708339 1 + 0 ID=LTnewLM_340051100.1:CDS:1;Parent=LTnewLM_340051100.1 ### LTnewLM_34 . polypeptide 1707167 1708339 . + . ID=LTnewLM_340051100.1:pep;Derives_from=LTnewLM_340051100.1;orthologous_to=LmjF.34.4560_mRNA;ortholog_cluster=OG0005671;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 1707311 1707469 . + . Parent=LTnewLM_340051100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_34 Pfam protein_match 1707566 1707748 . + . Parent=LTnewLM_340051100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_34 AUGUSTUS gene 1709893 1710252 1 + . ID=LTnewLM_340051200 LTnewLM_34 AUGUSTUS mRNA 1709893 1710252 1 + . ID=LTnewLM_340051200.1;Parent=LTnewLM_340051200 LTnewLM_34 AUGUSTUS CDS 1709893 1710252 1 + 0 ID=LTnewLM_340051200.1:CDS:1;Parent=LTnewLM_340051200.1 ### LTnewLM_34 . polypeptide 1709893 1710252 . + . ID=LTnewLM_340051200.1:pep;Derives_from=LTnewLM_340051200.1;orthologous_to=LmjF.34.4570_mRNA;ortholog_cluster=OG0005672;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1711277 1712254 1 + . ID=LTnewLM_340051300 LTnewLM_34 AUGUSTUS mRNA 1711277 1712254 1 + . ID=LTnewLM_340051300.1;Parent=LTnewLM_340051300 LTnewLM_34 AUGUSTUS CDS 1711277 1712254 1 + 0 ID=LTnewLM_340051300.1:CDS:1;Parent=LTnewLM_340051300.1 ### LTnewLM_34 . polypeptide 1711277 1712254 . + . ID=LTnewLM_340051300.1:pep;Derives_from=LTnewLM_340051300.1;orthologous_to=LmjF.34.4580_mRNA;ortholog_cluster=OG0005673;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1713914 1714990 1 + . ID=LTnewLM_340051400 LTnewLM_34 AUGUSTUS mRNA 1713914 1714990 1 + . ID=LTnewLM_340051400.1;Parent=LTnewLM_340051400 LTnewLM_34 AUGUSTUS CDS 1713914 1714990 1 + 0 ID=LTnewLM_340051400.1:CDS:1;Parent=LTnewLM_340051400.1 ### LTnewLM_34 . polypeptide 1713914 1714990 . + . ID=LTnewLM_340051400.1:pep;Derives_from=LTnewLM_340051400.1;orthologous_to=LmjF.34.4590_mRNA;ortholog_cluster=OG0005674;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1715687 1716526 1 + . ID=LTnewLM_340051500 LTnewLM_34 AUGUSTUS mRNA 1715687 1716526 1 + . ID=LTnewLM_340051500.1;Parent=LTnewLM_340051500 LTnewLM_34 AUGUSTUS CDS 1715687 1716526 1 + 0 ID=LTnewLM_340051500.1:CDS:1;Parent=LTnewLM_340051500.1 ### LTnewLM_34 . polypeptide 1715687 1716526 . + . ID=LTnewLM_340051500.1:pep;Derives_from=LTnewLM_340051500.1;orthologous_to=LmjF.34.4600_mRNA;ortholog_cluster=OG0005675;product=term%3DARD/ARD' family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03079;Ontology_term=GO:0055114,GO:0010309 LTnewLM_34 Pfam protein_match 1716047 1716412 . + . Parent=LTnewLM_340051500.1:pep;Name=PF03079;signature_desc=ARD/ARD' family;Ontology_term=GO:0010309,GO:0055114 ### LTnewLM_34 AUGUSTUS gene 1717283 1718950 1 + . ID=LTnewLM_340051600 LTnewLM_34 AUGUSTUS mRNA 1717283 1718950 1 + . ID=LTnewLM_340051600.1;Parent=LTnewLM_340051600 LTnewLM_34 AUGUSTUS CDS 1717283 1718950 1 + 0 ID=LTnewLM_340051600.1:CDS:1;Parent=LTnewLM_340051600.1 ### LTnewLM_34 . polypeptide 1717283 1718950 . + . ID=LTnewLM_340051600.1:pep;Derives_from=LTnewLM_340051600.1;orthologous_to=LmjF.34.4610_mRNA;ortholog_cluster=OG0005676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_34 AUGUSTUS gene 1720072 1722477 1 + . ID=LTnewLM_340051700 LTnewLM_34 AUGUSTUS mRNA 1720072 1722477 1 + . ID=LTnewLM_340051700.1;Parent=LTnewLM_340051700 LTnewLM_34 AUGUSTUS CDS 1720072 1722477 1 + 0 ID=LTnewLM_340051700.1:CDS:1;Parent=LTnewLM_340051700.1 ### LTnewLM_34 . polypeptide 1720072 1722477 . + . ID=LTnewLM_340051700.1:pep;Derives_from=LTnewLM_340051700.1;orthologous_to=LmjF.34.4620_mRNA;ortholog_cluster=OG0005677;product=term%3DCyclic nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027 LTnewLM_34 Pfam protein_match 1720372 1720641 . + . Parent=LTnewLM_340051700.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain ### LTnewLM_35 AUGUSTUS gene 1 889 0.46 + . ID=LTnewLM_350005000;fiveEndPartial=true;Start_range=.,. LTnewLM_35 AUGUSTUS mRNA 1 889 0.46 + . ID=LTnewLM_350005000.1;Parent=LTnewLM_350005000 LTnewLM_35 AUGUSTUS CDS 546 889 0.46 + 2 ID=LTnewLM_350005000.1:CDS:1;Parent=LTnewLM_350005000.1 ### LTnewLM_35 . contig 1 2041183 . + . Name=LTnewLM_CTG000036 LTnewLM_35 . polypeptide 546 889 . + . ID=LTnewLM_350005000.1:pep;Derives_from=LTnewLM_350005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 7563 10013 1 - . ID=LTnewLM_350005100 LTnewLM_35 AUGUSTUS mRNA 7563 10013 1 - . ID=LTnewLM_350005100.1;Parent=LTnewLM_350005100 LTnewLM_35 AUGUSTUS CDS 7563 10013 1 - 0 ID=LTnewLM_350005100.1:CDS:1;Parent=LTnewLM_350005100.1 ### LTnewLM_35 . polypeptide 7563 10013 . - . ID=LTnewLM_350005100.1:pep;Derives_from=LTnewLM_350005100.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 11821 12123 1 - . ID=LTnewLM_350005200 LTnewLM_35 AUGUSTUS mRNA 11821 12123 1 - . ID=LTnewLM_350005200.1;Parent=LTnewLM_350005200 LTnewLM_35 AUGUSTUS CDS 11821 12123 1 - 0 ID=LTnewLM_350005200.1:CDS:1;Parent=LTnewLM_350005200.1 ### LTnewLM_35 . polypeptide 11821 12123 . - . ID=LTnewLM_350005200.1:pep;Derives_from=LTnewLM_350005200.1;orthologous_to=LTnewLM_250031400.1,LTnewLM_360005200.1,LmjF.02.0020_mRNA,LmjF.25.2450_mRNA,LmjF.31.3180_mRNA,LmjF.35.1310_mRNA,LmjF.36.0020_mRNA;ortholog_cluster=OG0000027;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone/Centromere kinetochore component CENP-T histone fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808|Pfam:PF15511;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_35 Pfam protein_match 11842 12027 . - . Parent=LTnewLM_350005200.1:pep;Name=PF15511;signature_desc=Centromere kinetochore component CENP-T histone fold LTnewLM_35 Pfam protein_match 11857 12042 . - . Parent=LTnewLM_350005200.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_35 Pfam protein_match 11860 12027 . - . Parent=LTnewLM_350005200.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_35 AUGUSTUS gene 12588 14111 1 - . ID=LTnewLM_350005300 LTnewLM_35 AUGUSTUS mRNA 12588 14111 1 - . ID=LTnewLM_350005300.1;Parent=LTnewLM_350005300 LTnewLM_35 AUGUSTUS CDS 12588 14111 1 - 0 ID=LTnewLM_350005300.1:CDS:1;Parent=LTnewLM_350005300.1 ### LTnewLM_35 . polypeptide 12588 14111 . - . ID=LTnewLM_350005300.1:pep;Derives_from=LTnewLM_350005300.1;orthologous_to=LTnewLM_350005400.1,LmjF.35.0030_mRNA;ortholog_cluster=OG0000462;product=term%3DPyruvate kinase%2C barrel domain/Pyruvate kinase%2C alpha/beta domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00224|Pfam:PF02887;Ontology_term=GO:0006096,GO:0000287,GO:0030955,GO:0004743 LTnewLM_35 Pfam protein_match 12651 12953 . - . Parent=LTnewLM_350005300.1:pep;Name=PF02887;signature_desc=Pyruvate kinase%2C alpha/beta domain LTnewLM_35 Pfam protein_match 13008 14030 . - . Parent=LTnewLM_350005300.1:pep;Name=PF00224;signature_desc=Pyruvate kinase%2C barrel domain;Ontology_term=GO:0000287,GO:0004743,GO:0030955,GO:0006096 ### LTnewLM_35 AUGUSTUS gene 15934 17433 1 - . ID=LTnewLM_350005400 LTnewLM_35 AUGUSTUS mRNA 15934 17433 1 - . ID=LTnewLM_350005400.1;Parent=LTnewLM_350005400 LTnewLM_35 AUGUSTUS CDS 15934 17433 1 - 0 ID=LTnewLM_350005400.1:CDS:1;Parent=LTnewLM_350005400.1 ### LTnewLM_35 . polypeptide 15934 17433 . - . ID=LTnewLM_350005400.1:pep;Derives_from=LTnewLM_350005400.1;orthologous_to=LTnewLM_350005300.1,LmjF.35.0030_mRNA;ortholog_cluster=OG0000462;product=term%3DPyruvate kinase%2C barrel domain/Pyruvate kinase%2C alpha/beta domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00224|Pfam:PF02887;Ontology_term=GO:0006096,GO:0000287,GO:0030955,GO:0004743 LTnewLM_35 Pfam protein_match 15952 16299 . - . Parent=LTnewLM_350005400.1:pep;Name=PF02887;signature_desc=Pyruvate kinase%2C alpha/beta domain LTnewLM_35 Pfam protein_match 16354 17376 . - . Parent=LTnewLM_350005400.1:pep;Name=PF00224;signature_desc=Pyruvate kinase%2C barrel domain;Ontology_term=GO:0000287,GO:0004743,GO:0030955,GO:0006096 ### LTnewLM_35 AUGUSTUS gene 18091 20280 1 - . ID=LTnewLM_350005500 LTnewLM_35 AUGUSTUS mRNA 18091 20280 1 - . ID=LTnewLM_350005500.1;Parent=LTnewLM_350005500 LTnewLM_35 AUGUSTUS CDS 18091 20280 1 - 0 ID=LTnewLM_350005500.1:CDS:1;Parent=LTnewLM_350005500.1 ### LTnewLM_35 . polypeptide 18091 20280 . - . ID=LTnewLM_350005500.1:pep;Derives_from=LTnewLM_350005500.1;orthologous_to=LmjF.35.0040_mRNA;ortholog_cluster=OG0005678;product=term%3DPhosphatidylinositol-specific phospholipase C%2C X domain/Phosphatidylinositol-specific phospholipase C%2C Y domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00388|Pfam:PF00387;Ontology_term=GO:0035556,GO:0004435,GO:0007165,GO:0006629 LTnewLM_35 Pfam protein_match 18523 18810 . - . Parent=LTnewLM_350005500.1:pep;Name=PF00387;signature_desc=Phosphatidylinositol-specific phospholipase C%2C Y domain;Ontology_term=GO:0004435,GO:0006629,GO:0007165,GO:0035556 LTnewLM_35 Pfam protein_match 18946 19395 . - . Parent=LTnewLM_350005500.1:pep;Name=PF00388;signature_desc=Phosphatidylinositol-specific phospholipase C%2C X domain ### LTnewLM_35 AUGUSTUS gene 21549 22649 1 - . ID=LTnewLM_350005600 LTnewLM_35 AUGUSTUS mRNA 21549 22649 1 - . ID=LTnewLM_350005600.1;Parent=LTnewLM_350005600 LTnewLM_35 AUGUSTUS CDS 21549 22649 1 - 0 ID=LTnewLM_350005600.1:CDS:1;Parent=LTnewLM_350005600.1 ### LTnewLM_35 . polypeptide 21549 22649 . - . ID=LTnewLM_350005600.1:pep;Derives_from=LTnewLM_350005600.1;orthologous_to=LmjF.35.0050_mRNA;ortholog_cluster=OG0005679;product=term%3DTransketolase%2C pyrimidine binding domain/Transketolase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02779|Pfam:PF02780;Ontology_term=GO:0003824,GO:0008152 LTnewLM_35 Pfam protein_match 21606 21941 . - . Parent=LTnewLM_350005600.1:pep;Name=PF02780;signature_desc=Transketolase%2C C-terminal domain;Ontology_term=GO:0003824,GO:0008152 LTnewLM_35 Pfam protein_match 21990 22496 . - . Parent=LTnewLM_350005600.1:pep;Name=PF02779;signature_desc=Transketolase%2C pyrimidine binding domain ### LTnewLM_35 AUGUSTUS gene 23653 24357 1 - . ID=LTnewLM_350005700 LTnewLM_35 AUGUSTUS mRNA 23653 24357 1 - . ID=LTnewLM_350005700.1;Parent=LTnewLM_350005700 LTnewLM_35 AUGUSTUS CDS 23653 24357 1 - 0 ID=LTnewLM_350005700.1:CDS:1;Parent=LTnewLM_350005700.1 ### LTnewLM_35 . polypeptide 23653 24357 . - . ID=LTnewLM_350005700.1:pep;Derives_from=LTnewLM_350005700.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 25146 27158 1 - . ID=LTnewLM_350005800 LTnewLM_35 AUGUSTUS mRNA 25146 27158 1 - . ID=LTnewLM_350005800.1;Parent=LTnewLM_350005800 LTnewLM_35 AUGUSTUS CDS 25146 27158 1 - 0 ID=LTnewLM_350005800.1:CDS:1;Parent=LTnewLM_350005800.1 ### LTnewLM_35 . polypeptide 25146 27158 . - . ID=LTnewLM_350005800.1:pep;Derives_from=LTnewLM_350005800.1;orthologous_to=LmjF.35.0060_mRNA;ortholog_cluster=OG0005680;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 28105 29022 1 - . ID=LTnewLM_350005900 LTnewLM_35 AUGUSTUS mRNA 28105 29022 1 - . ID=LTnewLM_350005900.1;Parent=LTnewLM_350005900 LTnewLM_35 AUGUSTUS CDS 28105 29022 1 - 0 ID=LTnewLM_350005900.1:CDS:1;Parent=LTnewLM_350005900.1 ### LTnewLM_35 . polypeptide 28105 29022 . - . ID=LTnewLM_350005900.1:pep;Derives_from=LTnewLM_350005900.1;orthologous_to=LmjF.35.0070_mRNA;ortholog_cluster=OG0005681;product=term%3DSPFH domain / Band 7 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01145 LTnewLM_35 Pfam protein_match 28333 28860 . - . Parent=LTnewLM_350005900.1:pep;Name=PF01145;signature_desc=SPFH domain / Band 7 family ### LTnewLM_35 AUGUSTUS gene 30011 31750 1 - . ID=LTnewLM_350006000 LTnewLM_35 AUGUSTUS mRNA 30011 31750 1 - . ID=LTnewLM_350006000.1;Parent=LTnewLM_350006000 LTnewLM_35 AUGUSTUS CDS 30011 31750 1 - 0 ID=LTnewLM_350006000.1:CDS:1;Parent=LTnewLM_350006000.1 ### LTnewLM_35 . polypeptide 30011 31750 . - . ID=LTnewLM_350006000.1:pep;Derives_from=LTnewLM_350006000.1;orthologous_to=LmjF.35.0080_mRNA;ortholog_cluster=OG0005682;product=term%3DCation transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02386;Ontology_term=GO:0006812,GO:0008324,GO:0055085 LTnewLM_35 Pfam protein_match 30104 30370 . - . Parent=LTnewLM_350006000.1:pep;Name=PF02386;signature_desc=Cation transport protein;Ontology_term=GO:0008324,GO:0006812,GO:0055085 ### LTnewLM_35 AUGUSTUS gene 32701 33606 1 - . ID=LTnewLM_350006100 LTnewLM_35 AUGUSTUS mRNA 32701 33606 1 - . ID=LTnewLM_350006100.1;Parent=LTnewLM_350006100 LTnewLM_35 AUGUSTUS CDS 32701 33606 1 - 0 ID=LTnewLM_350006100.1:CDS:1;Parent=LTnewLM_350006100.1 ### LTnewLM_35 . polypeptide 32701 33606 . - . ID=LTnewLM_350006100.1:pep;Derives_from=LTnewLM_350006100.1;orthologous_to=LmjF.35.0090_mRNA;ortholog_cluster=OG0005683;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 34681 35289 1 - . ID=LTnewLM_350006200 LTnewLM_35 AUGUSTUS mRNA 34681 35289 1 - . ID=LTnewLM_350006200.1;Parent=LTnewLM_350006200 LTnewLM_35 AUGUSTUS CDS 34681 35289 1 - 0 ID=LTnewLM_350006200.1:CDS:1;Parent=LTnewLM_350006200.1 ### LTnewLM_35 . polypeptide 34681 35289 . - . ID=LTnewLM_350006200.1:pep;Derives_from=LTnewLM_350006200.1;orthologous_to=LmjF.35.0100_mRNA;ortholog_cluster=OG0005684;product=term%3DUbiquinol-cytochrome C reductase complex 14kD subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02271;Ontology_term=GO:0006122,GO:0005750 LTnewLM_35 Pfam protein_match 34720 34992 . - . Parent=LTnewLM_350006200.1:pep;Name=PF02271;signature_desc=Ubiquinol-cytochrome C reductase complex 14kD subunit;Ontology_term=GO:0006122,GO:0005750 ### LTnewLM_35 AUGUSTUS gene 36166 36720 1 - . ID=LTnewLM_350006300 LTnewLM_35 AUGUSTUS mRNA 36166 36720 1 - . ID=LTnewLM_350006300.1;Parent=LTnewLM_350006300 LTnewLM_35 AUGUSTUS CDS 36166 36720 1 - 0 ID=LTnewLM_350006300.1:CDS:1;Parent=LTnewLM_350006300.1 ### LTnewLM_35 . polypeptide 36166 36720 . - . ID=LTnewLM_350006300.1:pep;Derives_from=LTnewLM_350006300.1;orthologous_to=LmjF.35.0110_mRNA;ortholog_cluster=OG0005685;product=term%3DClathrin adaptor complex small chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01217 LTnewLM_35 Pfam protein_match 36253 36702 . - . Parent=LTnewLM_350006300.1:pep;Name=PF01217;signature_desc=Clathrin adaptor complex small chain ### LTnewLM_35 AUGUSTUS gene 37430 38776 1 - . ID=LTnewLM_350006400 LTnewLM_35 AUGUSTUS mRNA 37430 38776 1 - . ID=LTnewLM_350006400.1;Parent=LTnewLM_350006400 LTnewLM_35 AUGUSTUS CDS 37430 38776 1 - 0 ID=LTnewLM_350006400.1:CDS:1;Parent=LTnewLM_350006400.1 ### LTnewLM_35 . polypeptide 37430 38776 . - . ID=LTnewLM_350006400.1:pep;Derives_from=LTnewLM_350006400.1;orthologous_to=LmjF.35.0120_mRNA;ortholog_cluster=OG0005686;product=term%3DLMBR1-like membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04791 LTnewLM_35 Pfam protein_match 38117 38758 . - . Parent=LTnewLM_350006400.1:pep;Name=PF04791;signature_desc=LMBR1-like membrane protein ### LTnewLM_35 AUGUSTUS gene 39470 40030 1 - . ID=LTnewLM_350006500 LTnewLM_35 AUGUSTUS mRNA 39470 40030 1 - . ID=LTnewLM_350006500.1;Parent=LTnewLM_350006500 LTnewLM_35 AUGUSTUS CDS 39470 40030 1 - 0 ID=LTnewLM_350006500.1:CDS:1;Parent=LTnewLM_350006500.1 ### LTnewLM_35 . polypeptide 39470 40030 . - . ID=LTnewLM_350006500.1:pep;Derives_from=LTnewLM_350006500.1;orthologous_to=LmjF.35.0130_mRNA;ortholog_cluster=OG0005687;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF01926|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_35 Pfam protein_match 39503 39976 . - . Parent=LTnewLM_350006500.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_35 Pfam protein_match 39503 40021 . - . Parent=LTnewLM_350006500.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_35 Pfam protein_match 39605 39985 . - . Parent=LTnewLM_350006500.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_35 Pfam protein_match 39641 39979 . - . Parent=LTnewLM_350006500.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_35 Pfam protein_match 39650 39979 . - . Parent=LTnewLM_350006500.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_35 Pfam protein_match 39656 39979 . - . Parent=LTnewLM_350006500.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_35 AUGUSTUS gene 40891 41250 1 - . ID=LTnewLM_350006600 LTnewLM_35 AUGUSTUS mRNA 40891 41250 1 - . ID=LTnewLM_350006600.1;Parent=LTnewLM_350006600 LTnewLM_35 AUGUSTUS CDS 40891 41250 1 - 0 ID=LTnewLM_350006600.1:CDS:1;Parent=LTnewLM_350006600.1 ### LTnewLM_35 . polypeptide 40891 41250 . - . ID=LTnewLM_350006600.1:pep;Derives_from=LTnewLM_350006600.1;orthologous_to=LmjF.35.0140_mRNA;ortholog_cluster=OG0005688;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 41908 42780 1 - . ID=LTnewLM_350006700 LTnewLM_35 AUGUSTUS mRNA 41908 42780 1 - . ID=LTnewLM_350006700.1;Parent=LTnewLM_350006700 LTnewLM_35 AUGUSTUS CDS 41908 42780 1 - 0 ID=LTnewLM_350006700.1:CDS:1;Parent=LTnewLM_350006700.1 ### LTnewLM_35 . polypeptide 41908 42780 . - . ID=LTnewLM_350006700.1:pep;Derives_from=LTnewLM_350006700.1;orthologous_to=LmjF.35.0150_mRNA;ortholog_cluster=OG0005689;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 43601 44548 1 - . ID=LTnewLM_350006800 LTnewLM_35 AUGUSTUS mRNA 43601 44548 1 - . ID=LTnewLM_350006800.1;Parent=LTnewLM_350006800 LTnewLM_35 AUGUSTUS CDS 43601 44548 1 - 0 ID=LTnewLM_350006800.1:CDS:1;Parent=LTnewLM_350006800.1 ### LTnewLM_35 . polypeptide 43601 44548 . - . ID=LTnewLM_350006800.1:pep;Derives_from=LTnewLM_350006800.1;orthologous_to=LmjF.35.0160_mRNA;ortholog_cluster=OG0005690;product=term%3DTrypanosoma Tc-38 (p38) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20054 LTnewLM_35 Pfam protein_match 44063 44152 . - . Parent=LTnewLM_350006800.1:pep;Name=PF20054;signature_desc=Trypanosoma Tc-38 (p38) protein ### LTnewLM_35 . pseudogene 45050 46132 . - . ID=LTnewLM_350006900:pseudogene;coverage=0.997;sequence_ID=0.917;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0170_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 45050 46132 . - . ID=LTnewLM_350006900.1;Parent=LTnewLM_350006900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 45050 46132 . - . ID=LTnewLM_350006900.1:pseudogenic_exon:1;Parent=LTnewLM_350006900.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 45050 46132 . - . ID=LTnewLM_350006900.1:pep;Derives_from=LTnewLM_350006900.1;orthologous_to=LmjF.35.0170_mRNA;ortholog_cluster=OG0007650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 46823 49411 1 - . ID=LTnewLM_350007000 LTnewLM_35 AUGUSTUS mRNA 46823 49411 1 - . ID=LTnewLM_350007000.1;Parent=LTnewLM_350007000 LTnewLM_35 AUGUSTUS CDS 46823 49411 1 - 0 ID=LTnewLM_350007000.1:CDS:1;Parent=LTnewLM_350007000.1 ### LTnewLM_35 . polypeptide 46823 49411 . - . ID=LTnewLM_350007000.1:pep;Derives_from=LTnewLM_350007000.1;orthologous_to=LmjF.35.0180_mRNA;ortholog_cluster=OG0005691;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 51810 52532 1 + . ID=LTnewLM_350007100 LTnewLM_35 AUGUSTUS mRNA 51810 52532 1 + . ID=LTnewLM_350007100.1;Parent=LTnewLM_350007100 LTnewLM_35 AUGUSTUS CDS 51810 52532 1 + 0 ID=LTnewLM_350007100.1:CDS:1;Parent=LTnewLM_350007100.1 ### LTnewLM_35 . polypeptide 51810 52532 . + . ID=LTnewLM_350007100.1:pep;Derives_from=LTnewLM_350007100.1;orthologous_to=LmjF.35.0190_mRNA;ortholog_cluster=OG0005692;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 51960 52376 . + . Parent=LTnewLM_350007100.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 54246 60653 1 + . ID=LTnewLM_350007200 LTnewLM_35 AUGUSTUS mRNA 54246 60653 1 + . ID=LTnewLM_350007200.1;Parent=LTnewLM_350007200 LTnewLM_35 AUGUSTUS CDS 54246 60653 1 + 0 ID=LTnewLM_350007200.1:CDS:1;Parent=LTnewLM_350007200.1 ### LTnewLM_35 . polypeptide 54246 60653 . + . ID=LTnewLM_350007200.1:pep;Derives_from=LTnewLM_350007200.1;orthologous_to=LmjF.35.0200_mRNA;ortholog_cluster=OG0005693;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 61605 61826 . + . ID=LTnewLM_350007300;coverage=1.0;sequence_ID=0.954;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.0210_0 LTnewLM_35 Liftoff mRNA 61605 61826 . + . ID=LTnewLM_350007300.1;Parent=LTnewLM_350007300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 61605 61826 . + 0 ID=LTnewLM_350007300.1:CDS:1;Parent=LTnewLM_350007300.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 61605 61826 . + . ID=LTnewLM_350007300.1:pep;Derives_from=LTnewLM_350007300.1;orthologous_to=LmjF.35.0210_mRNA;ortholog_cluster=OG0005694;product=term%3DProtein of unknown function (DUF1242)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06842 LTnewLM_35 Pfam protein_match 61635 61736 . + . Parent=LTnewLM_350007300.1:pep;Name=PF06842;signature_desc=Protein of unknown function (DUF1242) ### LTnewLM_35 AUGUSTUS gene 62790 63581 1 + . ID=LTnewLM_350007400 LTnewLM_35 AUGUSTUS mRNA 62790 63581 1 + . ID=LTnewLM_350007400.1;Parent=LTnewLM_350007400 LTnewLM_35 AUGUSTUS CDS 62790 63581 1 + 0 ID=LTnewLM_350007400.1:CDS:1;Parent=LTnewLM_350007400.1 ### LTnewLM_35 . polypeptide 62790 63581 . + . ID=LTnewLM_350007400.1:pep;Derives_from=LTnewLM_350007400.1;orthologous_to=LmjF.35.0220_mRNA;ortholog_cluster=OG0005695;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 64557 65663 1 + . ID=LTnewLM_350007500 LTnewLM_35 AUGUSTUS mRNA 64557 65663 1 + . ID=LTnewLM_350007500.1;Parent=LTnewLM_350007500 LTnewLM_35 AUGUSTUS CDS 64557 65663 1 + 0 ID=LTnewLM_350007500.1:CDS:1;Parent=LTnewLM_350007500.1 ### LTnewLM_35 . polypeptide 64557 65663 . + . ID=LTnewLM_350007500.1:pep;Derives_from=LTnewLM_350007500.1;orthologous_to=LmjF.35.0230_mRNA;ortholog_cluster=OG0005696;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 68588 68902 1 + . ID=LTnewLM_350007600 LTnewLM_35 AUGUSTUS mRNA 68588 68902 1 + . ID=LTnewLM_350007600.1;Parent=LTnewLM_350007600 LTnewLM_35 AUGUSTUS CDS 68588 68902 1 + 0 ID=LTnewLM_350007600.1:CDS:1;Parent=LTnewLM_350007600.1 ### LTnewLM_35 . polypeptide 68588 68902 . + . ID=LTnewLM_350007600.1:pep;Derives_from=LTnewLM_350007600.1;orthologous_to=LmjF.35.0240_mRNA;ortholog_cluster=OG0005697;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_35 Pfam protein_match 68618 68893 . + . Parent=LTnewLM_350007600.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_35 AUGUSTUS gene 69731 71872 1 + . ID=LTnewLM_350007700 LTnewLM_35 AUGUSTUS mRNA 69731 71872 1 + . ID=LTnewLM_350007700.1;Parent=LTnewLM_350007700 LTnewLM_35 AUGUSTUS CDS 69731 71872 1 + 0 ID=LTnewLM_350007700.1:CDS:1;Parent=LTnewLM_350007700.1 ### LTnewLM_35 . polypeptide 69731 71872 . + . ID=LTnewLM_350007700.1:pep;Derives_from=LTnewLM_350007700.1;orthologous_to=LmjF.35.0250_mRNA;ortholog_cluster=OG0005698;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 72303 74183 1 + . ID=LTnewLM_350007800 LTnewLM_35 AUGUSTUS mRNA 72303 74183 1 + . ID=LTnewLM_350007800.1;Parent=LTnewLM_350007800 LTnewLM_35 AUGUSTUS CDS 72303 74183 1 + 0 ID=LTnewLM_350007800.1:CDS:1;Parent=LTnewLM_350007800.1 ### LTnewLM_35 . polypeptide 72303 74183 . + . ID=LTnewLM_350007800.1:pep;Derives_from=LTnewLM_350007800.1;orthologous_to=LmjF.35.0260_mRNA;ortholog_cluster=OG0005699;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_35 Pfam protein_match 73239 73604 . + . Parent=LTnewLM_350007800.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_35 AUGUSTUS gene 75043 75276 1 + . ID=LTnewLM_350007900 LTnewLM_35 AUGUSTUS mRNA 75043 75276 1 + . ID=LTnewLM_350007900.1;Parent=LTnewLM_350007900 LTnewLM_35 AUGUSTUS CDS 75043 75276 1 + 0 ID=LTnewLM_350007900.1:CDS:1;Parent=LTnewLM_350007900.1 ### LTnewLM_35 . polypeptide 75043 75276 . + . ID=LTnewLM_350007900.1:pep;Derives_from=LTnewLM_350007900.1;orthologous_to=LmjF.35.0270_mRNA;ortholog_cluster=OG0005700;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 76991 77408 0.66 + . ID=LTnewLM_350008000 LTnewLM_35 AUGUSTUS mRNA 76991 77408 0.66 + . ID=LTnewLM_350008000.1;Parent=LTnewLM_350008000 LTnewLM_35 AUGUSTUS CDS 76991 77098 0.66 + 0 ID=LTnewLM_350008000.1:CDS:1;Parent=LTnewLM_350008000.1 LTnewLM_35 AUGUSTUS CDS 77226 77408 1 + 0 ID=LTnewLM_350008000.1:CDS:2;Parent=LTnewLM_350008000.1 ### LTnewLM_35 . polypeptide 76991 77408 . + . ID=LTnewLM_350008000.1:pep;Derives_from=LTnewLM_350008000.1;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 77789 78238 . + . ID=LTnewLM_350008100:pseudogene;coverage=0.993;sequence_ID=0.891;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0280_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 77789 78238 . + . ID=LTnewLM_350008100.1;Parent=LTnewLM_350008100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 77789 78238 . + . ID=LTnewLM_350008100.1:pseudogenic_exon:1;Parent=LTnewLM_350008100.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 77789 78238 . + . ID=LTnewLM_350008100.1:pep;Derives_from=LTnewLM_350008100.1;orthologous_to=LmjF.35.0280_mRNA;ortholog_cluster=OG0007651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 80227 85318 . + . ID=LTnewLM_350008200:pseudogene;coverage=0.952;sequence_ID=0.762;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0290_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 80227 85318 . + . ID=LTnewLM_350008200.1;Parent=LTnewLM_350008200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 80227 85318 . + . ID=LTnewLM_350008200.1:pseudogenic_exon:1;Parent=LTnewLM_350008200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 80227 85318 . + . ID=LTnewLM_350008200.1:pep;Derives_from=LTnewLM_350008200.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 86211 87209 1 + . ID=LTnewLM_350008300 LTnewLM_35 AUGUSTUS mRNA 86211 87209 1 + . ID=LTnewLM_350008300.1;Parent=LTnewLM_350008300 LTnewLM_35 AUGUSTUS CDS 86211 87209 1 + 0 ID=LTnewLM_350008300.1:CDS:1;Parent=LTnewLM_350008300.1 ### LTnewLM_35 . polypeptide 86211 87209 . + . ID=LTnewLM_350008300.1:pep;Derives_from=LTnewLM_350008300.1;orthologous_to=LmjF.35.0300_mRNA;ortholog_cluster=OG0005701;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 88396 89679 1 + . ID=LTnewLM_350008400 LTnewLM_35 AUGUSTUS mRNA 88396 89679 1 + . ID=LTnewLM_350008400.1;Parent=LTnewLM_350008400 LTnewLM_35 AUGUSTUS CDS 88396 89679 1 + 0 ID=LTnewLM_350008400.1:CDS:1;Parent=LTnewLM_350008400.1 ### LTnewLM_35 . polypeptide 88396 89679 . + . ID=LTnewLM_350008400.1:pep;Derives_from=LTnewLM_350008400.1;orthologous_to=LmjF.35.0310_mRNA;ortholog_cluster=OG0005702;product=term%3DAnkyrin repeats (3 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796 LTnewLM_35 Pfam protein_match 88936 89217 . + . Parent=LTnewLM_350008400.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_35 AUGUSTUS gene 91061 92692 1 + . ID=LTnewLM_350008500 LTnewLM_35 AUGUSTUS mRNA 91061 92692 1 + . ID=LTnewLM_350008500.1;Parent=LTnewLM_350008500 LTnewLM_35 AUGUSTUS CDS 91061 92692 1 + 0 ID=LTnewLM_350008500.1:CDS:1;Parent=LTnewLM_350008500.1 ### LTnewLM_35 . polypeptide 91061 92692 . + . ID=LTnewLM_350008500.1:pep;Derives_from=LTnewLM_350008500.1;orthologous_to=LmjF.35.0320_mRNA;ortholog_cluster=OG0005703;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_35 Pfam protein_match 91559 92635 . + . Parent=LTnewLM_350008500.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_35 AUGUSTUS gene 96138 97154 1 + . ID=LTnewLM_350008600 LTnewLM_35 AUGUSTUS mRNA 96138 97154 1 + . ID=LTnewLM_350008600.1;Parent=LTnewLM_350008600 LTnewLM_35 AUGUSTUS CDS 96138 97154 1 + 0 ID=LTnewLM_350008600.1:CDS:1;Parent=LTnewLM_350008600.1 ### LTnewLM_35 . polypeptide 96138 97154 . + . ID=LTnewLM_350008600.1:pep;Derives_from=LTnewLM_350008600.1;orthologous_to=LmjF.35.0330_mRNA;ortholog_cluster=OG0005704;product=term%3DKR domain/short chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08659|Pfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_35 Pfam protein_match 96243 96755 . + . Parent=LTnewLM_350008600.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_35 Pfam protein_match 96243 96836 . + . Parent=LTnewLM_350008600.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_35 Pfam protein_match 96270 96827 . + . Parent=LTnewLM_350008600.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_35 AUGUSTUS gene 97911 99406 0.63 + . ID=LTnewLM_350008700 LTnewLM_35 AUGUSTUS mRNA 97911 99406 0.63 + . ID=LTnewLM_350008700.1;Parent=LTnewLM_350008700 LTnewLM_35 AUGUSTUS CDS 97911 98235 0.99 + 0 ID=LTnewLM_350008700.1:CDS:1;Parent=LTnewLM_350008700.1 LTnewLM_35 AUGUSTUS CDS 98319 99406 0.63 + 2 ID=LTnewLM_350008700.1:CDS:2;Parent=LTnewLM_350008700.1 ### LTnewLM_35 . polypeptide 97911 99406 . + . ID=LTnewLM_350008700.1:pep;Derives_from=LTnewLM_350008700.1;orthologous_to=LmjF.35.0340_mRNA;ortholog_cluster=OG0005705;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 100140 102251 1 + . ID=LTnewLM_350008800 LTnewLM_35 AUGUSTUS mRNA 100140 102251 1 + . ID=LTnewLM_350008800.1;Parent=LTnewLM_350008800 LTnewLM_35 AUGUSTUS CDS 100140 102251 1 + 0 ID=LTnewLM_350008800.1:CDS:1;Parent=LTnewLM_350008800.1 ### LTnewLM_35 . polypeptide 100140 102251 . + . ID=LTnewLM_350008800.1:pep;Derives_from=LTnewLM_350008800.1;orthologous_to=LmjF.35.0350_mRNA;ortholog_cluster=OG0005706;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 103327 104220 1 + . ID=LTnewLM_350008900 LTnewLM_35 AUGUSTUS mRNA 103327 104220 1 + . ID=LTnewLM_350008900.1;Parent=LTnewLM_350008900 LTnewLM_35 AUGUSTUS CDS 103327 104220 1 + 0 ID=LTnewLM_350008900.1:CDS:1;Parent=LTnewLM_350008900.1 ### LTnewLM_35 . polypeptide 103327 104220 . + . ID=LTnewLM_350008900.1:pep;Derives_from=LTnewLM_350008900.1;orthologous_to=LmjF.35.0360_mRNA;ortholog_cluster=OG0005707;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16113|Pfam:PF00378;Ontology_term=GO:0003824,GO:0008152 LTnewLM_35 Pfam protein_match 103567 103998 . + . Parent=LTnewLM_350008900.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_35 Pfam protein_match 103576 104211 . + . Parent=LTnewLM_350008900.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_35 AUGUSTUS gene 104897 106114 1 + . ID=LTnewLM_350009000 LTnewLM_35 AUGUSTUS mRNA 104897 106114 1 + . ID=LTnewLM_350009000.1;Parent=LTnewLM_350009000 LTnewLM_35 AUGUSTUS CDS 104897 106114 1 + 0 ID=LTnewLM_350009000.1:CDS:1;Parent=LTnewLM_350009000.1 ### LTnewLM_35 . polypeptide 104897 106114 . + . ID=LTnewLM_350009000.1:pep;Derives_from=LTnewLM_350009000.1;orthologous_to=LmjF.35.0370_mRNA;ortholog_cluster=OG0005708;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 105059 105553 . + . Parent=LTnewLM_350009000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 105659 105982 . + . Parent=LTnewLM_350009000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_35 AUGUSTUS gene 111196 113043 1 + . ID=LTnewLM_350009100 LTnewLM_35 AUGUSTUS mRNA 111196 113043 1 + . ID=LTnewLM_350009100.1;Parent=LTnewLM_350009100 LTnewLM_35 AUGUSTUS CDS 111196 113043 1 + 0 ID=LTnewLM_350009100.1:CDS:1;Parent=LTnewLM_350009100.1 ### LTnewLM_35 . polypeptide 111196 113043 . + . ID=LTnewLM_350009100.1:pep;Derives_from=LTnewLM_350009100.1;orthologous_to=LmjF.35.0380_mRNA;ortholog_cluster=OG0005709;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_35 Pfam protein_match 112624 112857 . + . Parent=LTnewLM_350009100.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_35 AUGUSTUS gene 116679 117602 1 + . ID=LTnewLM_350009200 LTnewLM_35 AUGUSTUS mRNA 116679 117602 1 + . ID=LTnewLM_350009200.1;Parent=LTnewLM_350009200 LTnewLM_35 AUGUSTUS CDS 116679 117602 1 + 0 ID=LTnewLM_350009200.1:CDS:1;Parent=LTnewLM_350009200.1 ### LTnewLM_35 . polypeptide 116679 117602 . + . ID=LTnewLM_350009200.1:pep;Derives_from=LTnewLM_350009200.1;product=term%3Dhypothetical protein ### LTnewLM_35 Liftoff gene 122507 124180 . + . ID=LTnewLM_350009300;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0390_0 LTnewLM_35 Liftoff mRNA 122507 124180 . + . ID=LTnewLM_350009300.1;Parent=LTnewLM_350009300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 122507 124180 . + 0 ID=LTnewLM_350009300.1:CDS:1;Parent=LTnewLM_350009300.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 122507 124180 . + . ID=LTnewLM_350009300.1:pep;Derives_from=LTnewLM_350009300.1;orthologous_to=LmjF.35.0390_mRNA;ortholog_cluster=OG0005710;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 125039 125830 1 + . ID=LTnewLM_350009400 LTnewLM_35 AUGUSTUS mRNA 125039 125830 1 + . ID=LTnewLM_350009400.1;Parent=LTnewLM_350009400 LTnewLM_35 AUGUSTUS CDS 125039 125830 1 + 0 ID=LTnewLM_350009400.1:CDS:1;Parent=LTnewLM_350009400.1 ### LTnewLM_35 . polypeptide 125039 125830 . + . ID=LTnewLM_350009400.1:pep;Derives_from=LTnewLM_350009400.1;orthologous_to=LTnewLM_350009500.1,LTnewLM_350009600.1,LmjF.35.0400_mRNA,LmjF.35.0410_mRNA,LmjF.35.0420_mRNA;ortholog_cluster=OG0000070;product=term%3DRibosomal S3Ae family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01015;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 125087 125707 . + . Parent=LTnewLM_350009400.1:pep;Name=PF01015;signature_desc=Ribosomal S3Ae family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 126905 127696 1 + . ID=LTnewLM_350009500 LTnewLM_35 AUGUSTUS mRNA 126905 127696 1 + . ID=LTnewLM_350009500.1;Parent=LTnewLM_350009500 LTnewLM_35 AUGUSTUS CDS 126905 127696 1 + 0 ID=LTnewLM_350009500.1:CDS:1;Parent=LTnewLM_350009500.1 ### LTnewLM_35 . polypeptide 126905 127696 . + . ID=LTnewLM_350009500.1:pep;Derives_from=LTnewLM_350009500.1;orthologous_to=LTnewLM_350009400.1,LTnewLM_350009600.1,LmjF.35.0400_mRNA,LmjF.35.0410_mRNA,LmjF.35.0420_mRNA;ortholog_cluster=OG0000070;product=term%3DRibosomal S3Ae family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01015;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 126953 127573 . + . Parent=LTnewLM_350009500.1:pep;Name=PF01015;signature_desc=Ribosomal S3Ae family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 128771 129565 1 + . ID=LTnewLM_350009600 LTnewLM_35 AUGUSTUS mRNA 128771 129565 1 + . ID=LTnewLM_350009600.1;Parent=LTnewLM_350009600 LTnewLM_35 AUGUSTUS CDS 128771 129565 1 + 0 ID=LTnewLM_350009600.1:CDS:1;Parent=LTnewLM_350009600.1 ### LTnewLM_35 . polypeptide 128771 129565 . + . ID=LTnewLM_350009600.1:pep;Derives_from=LTnewLM_350009600.1;orthologous_to=LTnewLM_350009400.1,LTnewLM_350009500.1,LmjF.35.0400_mRNA,LmjF.35.0410_mRNA,LmjF.35.0420_mRNA;ortholog_cluster=OG0000070;product=term%3DRibosomal S3Ae family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01015;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 128819 129439 . + . Parent=LTnewLM_350009600.1:pep;Name=PF01015;signature_desc=Ribosomal S3Ae family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 130388 132091 1 + . ID=LTnewLM_350009700 LTnewLM_35 AUGUSTUS mRNA 130388 132091 1 + . ID=LTnewLM_350009700.1;Parent=LTnewLM_350009700 LTnewLM_35 AUGUSTUS CDS 130388 132091 1 + 0 ID=LTnewLM_350009700.1:CDS:1;Parent=LTnewLM_350009700.1 ### LTnewLM_35 . polypeptide 130388 132091 . + . ID=LTnewLM_350009700.1:pep;Derives_from=LTnewLM_350009700.1;orthologous_to=LmjF.35.0430_mRNA;ortholog_cluster=OG0005711;product=term%3DSperm-tail PG-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07004 LTnewLM_35 Pfam protein_match 131054 131155 . + . Parent=LTnewLM_350009700.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 131624 131689 . + . Parent=LTnewLM_350009700.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat ### LTnewLM_35 AUGUSTUS gene 133923 135836 1 + . ID=LTnewLM_350009800 LTnewLM_35 AUGUSTUS mRNA 133923 135836 1 + . ID=LTnewLM_350009800.1;Parent=LTnewLM_350009800 LTnewLM_35 AUGUSTUS CDS 133923 135836 1 + 0 ID=LTnewLM_350009800.1:CDS:1;Parent=LTnewLM_350009800.1 ### LTnewLM_35 . polypeptide 133923 135836 . + . ID=LTnewLM_350009800.1:pep;Derives_from=LTnewLM_350009800.1;orthologous_to=LmjF.35.0440_mRNA;ortholog_cluster=OG0005712;product=term%3DArrestin (or S-antigen)%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00339 LTnewLM_35 Pfam protein_match 134511 134630 . + . Parent=LTnewLM_350009800.1:pep;Name=PF00339;signature_desc=Arrestin (or S-antigen)%2C N-terminal domain ### LTnewLM_35 AUGUSTUS gene 136992 138803 1 + . ID=LTnewLM_350009900 LTnewLM_35 AUGUSTUS mRNA 136992 138803 1 + . ID=LTnewLM_350009900.1;Parent=LTnewLM_350009900 LTnewLM_35 AUGUSTUS CDS 136992 138803 1 + 0 ID=LTnewLM_350009900.1:CDS:1;Parent=LTnewLM_350009900.1 ### LTnewLM_35 . polypeptide 136992 138803 . + . ID=LTnewLM_350009900.1:pep;Derives_from=LTnewLM_350009900.1;orthologous_to=LmjF.35.0450_mRNA;ortholog_cluster=OG0005713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 139943 142696 1 + . ID=LTnewLM_350010000 LTnewLM_35 AUGUSTUS mRNA 139943 142696 1 + . ID=LTnewLM_350010000.1;Parent=LTnewLM_350010000 LTnewLM_35 AUGUSTUS CDS 139943 142696 1 + 0 ID=LTnewLM_350010000.1:CDS:1;Parent=LTnewLM_350010000.1 ### LTnewLM_35 . polypeptide 139943 142696 . + . ID=LTnewLM_350010000.1:pep;Derives_from=LTnewLM_350010000.1;orthologous_to=LmjF.35.0460_mRNA;ortholog_cluster=OG0005714;product=term%3DMale gamete fusion factor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10699 LTnewLM_35 Pfam protein_match 140381 141907 . + . Parent=LTnewLM_350010000.1:pep;Name=PF10699;signature_desc=Male gamete fusion factor ### LTnewLM_35 AUGUSTUS gene 145135 146106 1 + . ID=LTnewLM_350010100 LTnewLM_35 AUGUSTUS mRNA 145135 146106 1 + . ID=LTnewLM_350010100.1;Parent=LTnewLM_350010100 LTnewLM_35 AUGUSTUS CDS 145135 146106 1 + 0 ID=LTnewLM_350010100.1:CDS:1;Parent=LTnewLM_350010100.1 ### LTnewLM_35 . polypeptide 145135 146106 . + . ID=LTnewLM_350010100.1:pep;Derives_from=LTnewLM_350010100.1;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 147140 147708 795 + . ID=LTnewLM_350010200:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.35.0470:mRNA 1 194;original_prot_length=197 LTnewLM_35 . pseudogenic_transcript 147140 147708 . + . ID=LTnewLM_350010200.1;Parent=LTnewLM_350010200:pseudogene LTnewLM_35 . pseudogenic_exon 147140 147682 . + . ID=LTnewLM_350010200.1:pseudogenic_exon:1;Parent=LTnewLM_350010200.1 LTnewLM_35 . pseudogenic_exon 147685 147708 . + . ID=LTnewLM_350010200.1:pseudogenic_exon:2;Parent=LTnewLM_350010200.1 ### LTnewLM_35 . polypeptide 147140 147708 . + . ID=LTnewLM_350010200.1:pep;Derives_from=LTnewLM_350010200.1;orthologous_to=LmjF.35.0470_mRNA;ortholog_cluster=OG0007652;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 148171 148596 1 + . ID=LTnewLM_350010300 LTnewLM_35 AUGUSTUS mRNA 148171 148596 1 + . ID=LTnewLM_350010300.1;Parent=LTnewLM_350010300 LTnewLM_35 AUGUSTUS CDS 148171 148596 1 + 0 ID=LTnewLM_350010300.1:CDS:1;Parent=LTnewLM_350010300.1 ### LTnewLM_35 . polypeptide 148171 148596 . + . ID=LTnewLM_350010300.1:pep;Derives_from=LTnewLM_350010300.1;orthologous_to=LmjF.35.0480_mRNA;ortholog_cluster=OG0005715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 152749 157794 1 + . ID=LTnewLM_350010400 LTnewLM_35 AUGUSTUS mRNA 152749 157794 1 + . ID=LTnewLM_350010400.1;Parent=LTnewLM_350010400 LTnewLM_35 AUGUSTUS CDS 152749 157794 1 + 0 ID=LTnewLM_350010400.1:CDS:1;Parent=LTnewLM_350010400.1 ### LTnewLM_35 . polypeptide 152749 157794 . + . ID=LTnewLM_350010400.1:pep;Derives_from=LTnewLM_350010400.1;orthologous_to=LmjF.35.0490_mRNA;ortholog_cluster=OG0005716;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 153082 153543 . + . Parent=LTnewLM_350010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 153091 153420 . + . Parent=LTnewLM_350010400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 154867 155100 . + . Parent=LTnewLM_350010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_35 . pseudogene 163564 170295 9.62e+03 + . ID=LTnewLM_350010500:pseudogene;has_internal_stop=false;has_frameshift=true;Target=LmjF.35.0550:mRNA 61 2294;original_prot_length=2426 LTnewLM_35 . pseudogenic_transcript 163564 170295 . + . ID=LTnewLM_350010500.1;Parent=LTnewLM_350010500:pseudogene LTnewLM_35 . pseudogenic_exon 163564 169062 . + . ID=LTnewLM_350010500.1:pseudogenic_exon:1;Parent=LTnewLM_350010500.1 LTnewLM_35 . pseudogenic_exon 169065 169370 . + . ID=LTnewLM_350010500.1:pseudogenic_exon:2;Parent=LTnewLM_350010500.1 LTnewLM_35 . pseudogenic_exon 169372 170295 . + . ID=LTnewLM_350010500.1:pseudogenic_exon:3;Parent=LTnewLM_350010500.1 ### LTnewLM_35 . polypeptide 163564 170295 . + . ID=LTnewLM_350010500.1:pep;Derives_from=LTnewLM_350010500.1;orthologous_to=LTnewLM_350010700.1,LmjF.35.0500_mRNA,LmjF.35.0550_mRNA;ortholog_cluster=OG0000244;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 165061 165237 . + . Parent=LTnewLM_350010500.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 193428 193928 1 + . ID=LTnewLM_350010600 LTnewLM_35 AUGUSTUS mRNA 193428 193928 1 + . ID=LTnewLM_350010600.1;Parent=LTnewLM_350010600 LTnewLM_35 AUGUSTUS CDS 193428 193928 1 + 0 ID=LTnewLM_350010600.1:CDS:1;Parent=LTnewLM_350010600.1 ### LTnewLM_35 . polypeptide 193428 193928 . + . ID=LTnewLM_350010600.1:pep;Derives_from=LTnewLM_350010600.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 202247 211394 0.43 + . ID=LTnewLM_350010700 LTnewLM_35 AUGUSTUS mRNA 202247 211394 0.43 + . ID=LTnewLM_350010700.1;Parent=LTnewLM_350010700 LTnewLM_35 AUGUSTUS CDS 202247 207546 0.83 + 0 ID=LTnewLM_350010700.1:CDS:1;Parent=LTnewLM_350010700.1 LTnewLM_35 AUGUSTUS CDS 207605 211394 0.47 + 1 ID=LTnewLM_350010700.1:CDS:2;Parent=LTnewLM_350010700.1 ### LTnewLM_35 . polypeptide 202247 211394 . + . ID=LTnewLM_350010700.1:pep;Derives_from=LTnewLM_350010700.1;orthologous_to=LTnewLM_350010500.1,LmjF.35.0500_mRNA,LmjF.35.0550_mRNA;ortholog_cluster=OG0000244;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 203735 203911 . + . Parent=LTnewLM_350010700.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 218686 221925 0.92 + . ID=LTnewLM_350010800 LTnewLM_35 AUGUSTUS mRNA 218686 221925 0.92 + . ID=LTnewLM_350010800.1;Parent=LTnewLM_350010800 LTnewLM_35 AUGUSTUS CDS 218686 221925 0.92 + 0 ID=LTnewLM_350010800.1:CDS:1;Parent=LTnewLM_350010800.1 ### LTnewLM_35 . polypeptide 218686 221925 . + . ID=LTnewLM_350010800.1:pep;Derives_from=LTnewLM_350010800.1;orthologous_to=LmjF.35.0560_mRNA;ortholog_cluster=OG0005717;product=term%3DPhosphatidylinositol-4-phosphate 5-Kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01504;Ontology_term=GO:0046488,GO:0016307 LTnewLM_35 Pfam protein_match 220918 221913 . + . Parent=LTnewLM_350010800.1:pep;Name=PF01504;signature_desc=Phosphatidylinositol-4-phosphate 5-Kinase;Ontology_term=GO:0016307,GO:0046488 ### LTnewLM_35 AUGUSTUS gene 222961 229329 1 + . ID=LTnewLM_350010900 LTnewLM_35 AUGUSTUS mRNA 222961 229329 1 + . ID=LTnewLM_350010900.1;Parent=LTnewLM_350010900 LTnewLM_35 AUGUSTUS CDS 222961 229329 1 + 0 ID=LTnewLM_350010900.1:CDS:1;Parent=LTnewLM_350010900.1 ### LTnewLM_35 . polypeptide 222961 229329 . + . ID=LTnewLM_350010900.1:pep;Derives_from=LTnewLM_350010900.1;orthologous_to=LmjF.35.0570_mRNA;ortholog_cluster=OG0005718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 231209 231883 1 + . ID=LTnewLM_350011000 LTnewLM_35 AUGUSTUS mRNA 231209 231883 1 + . ID=LTnewLM_350011000.1;Parent=LTnewLM_350011000 LTnewLM_35 AUGUSTUS CDS 231209 231883 1 + 0 ID=LTnewLM_350011000.1:CDS:1;Parent=LTnewLM_350011000.1 ### LTnewLM_35 . polypeptide 231209 231883 . + . ID=LTnewLM_350011000.1:pep;Derives_from=LTnewLM_350011000.1;orthologous_to=LmjF.35.0580_mRNA;ortholog_cluster=OG0005719;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_35 Pfam protein_match 231242 231802 . + . Parent=LTnewLM_350011000.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_35 AUGUSTUS gene 233273 235414 1 + . ID=LTnewLM_350011100 LTnewLM_35 AUGUSTUS mRNA 233273 235414 1 + . ID=LTnewLM_350011100.1;Parent=LTnewLM_350011100 LTnewLM_35 AUGUSTUS CDS 233273 235414 1 + 0 ID=LTnewLM_350011100.1:CDS:1;Parent=LTnewLM_350011100.1 ### LTnewLM_35 . polypeptide 233273 235414 . + . ID=LTnewLM_350011100.1:pep;Derives_from=LTnewLM_350011100.1;orthologous_to=LmjF.35.0590_mRNA;ortholog_cluster=OG0005720;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 236046 236585 1 + . ID=LTnewLM_350011200 LTnewLM_35 AUGUSTUS mRNA 236046 236585 1 + . ID=LTnewLM_350011200.1;Parent=LTnewLM_350011200 LTnewLM_35 AUGUSTUS CDS 236046 236585 1 + 0 ID=LTnewLM_350011200.1:CDS:1;Parent=LTnewLM_350011200.1 ### LTnewLM_35 . polypeptide 236046 236585 . + . ID=LTnewLM_350011200.1:pep;Derives_from=LTnewLM_350011200.1;orthologous_to=LTnewLM_320014700.1,LmjF.32.0880_mRNA,LmjF.35.0600_mRNA;ortholog_cluster=OG0000232;product=term%3DRibosomal proteins 50S-L18Ae/60S-L20/60S-L18A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01775;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_35 Pfam protein_match 236061 236429 . + . Parent=LTnewLM_350011200.1:pep;Name=PF01775;signature_desc=Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 237754 245262 1 + . ID=LTnewLM_350011300 LTnewLM_35 AUGUSTUS mRNA 237754 245262 1 + . ID=LTnewLM_350011300.1;Parent=LTnewLM_350011300 LTnewLM_35 AUGUSTUS CDS 237754 245262 1 + 0 ID=LTnewLM_350011300.1:CDS:1;Parent=LTnewLM_350011300.1 ### LTnewLM_35 . polypeptide 237754 245262 . + . ID=LTnewLM_350011300.1:pep;Derives_from=LTnewLM_350011300.1;orthologous_to=LmjF.35.0610_mRNA;ortholog_cluster=OG0005721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 246097 247236 1 + . ID=LTnewLM_350011400 LTnewLM_35 AUGUSTUS mRNA 246097 247236 1 + . ID=LTnewLM_350011400.1;Parent=LTnewLM_350011400 LTnewLM_35 AUGUSTUS CDS 246097 247236 1 + 0 ID=LTnewLM_350011400.1:CDS:1;Parent=LTnewLM_350011400.1 ### LTnewLM_35 . polypeptide 246097 247236 . + . ID=LTnewLM_350011400.1:pep;Derives_from=LTnewLM_350011400.1;orthologous_to=LmjF.35.0620_mRNA;ortholog_cluster=OG0005722;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 247841 249634 1 + . ID=LTnewLM_350011500 LTnewLM_35 AUGUSTUS mRNA 247841 249634 1 + . ID=LTnewLM_350011500.1;Parent=LTnewLM_350011500 LTnewLM_35 AUGUSTUS CDS 247841 249634 1 + 0 ID=LTnewLM_350011500.1:CDS:1;Parent=LTnewLM_350011500.1 ### LTnewLM_35 . polypeptide 247841 249634 . + . ID=LTnewLM_350011500.1:pep;Derives_from=LTnewLM_350011500.1;orthologous_to=LmjF.35.0630_mRNA;ortholog_cluster=OG0005723;product=term%3DNup53/35/40-type RNA recognition motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14605 LTnewLM_35 Pfam protein_match 248096 248263 . + . Parent=LTnewLM_350011500.1:pep;Name=PF14605;signature_desc=Nup53/35/40-type RNA recognition motif ### LTnewLM_35 AUGUSTUS gene 251539 254817 1 + . ID=LTnewLM_350011600 LTnewLM_35 AUGUSTUS mRNA 251539 254817 1 + . ID=LTnewLM_350011600.1;Parent=LTnewLM_350011600 LTnewLM_35 AUGUSTUS CDS 251539 254817 1 + 0 ID=LTnewLM_350011600.1:CDS:1;Parent=LTnewLM_350011600.1 ### LTnewLM_35 . polypeptide 251539 254817 . + . ID=LTnewLM_350011600.1:pep;Derives_from=LTnewLM_350011600.1;orthologous_to=LmjF.35.0640_mRNA;ortholog_cluster=OG0005724;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_35 Pfam protein_match 252967 253938 . + . Parent=LTnewLM_350011600.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain LTnewLM_35 Pfam protein_match 254044 254676 . + . Parent=LTnewLM_350011600.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal ### LTnewLM_35 AUGUSTUS gene 256838 260680 1 + . ID=LTnewLM_350011700 LTnewLM_35 AUGUSTUS mRNA 256838 260680 1 + . ID=LTnewLM_350011700.1;Parent=LTnewLM_350011700 LTnewLM_35 AUGUSTUS CDS 256838 260680 1 + 0 ID=LTnewLM_350011700.1:CDS:1;Parent=LTnewLM_350011700.1 ### LTnewLM_35 . polypeptide 256838 260680 . + . ID=LTnewLM_350011700.1:pep;Derives_from=LTnewLM_350011700.1;orthologous_to=LmjF.35.0660_mRNA;ortholog_cluster=OG0005725;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 261392 263080 . + . ID=LTnewLM_350011800.1:pep;Derives_from=LTnewLM_350011800.1;orthologous_to=LTnewLM_350011800.2,LTnewLM_350011800.3,LmjF.35.0670_mRNA;ortholog_cluster=OG0000245;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 261392 273932 1.83 + . ID=LTnewLM_350011800 LTnewLM_35 AUGUSTUS mRNA 261392 263080 1 + . ID=LTnewLM_350011800.1;Parent=LTnewLM_350011800 LTnewLM_35 AUGUSTUS CDS 261392 263080 1 + 0 ID=LTnewLM_350011800.1:CDS:1;Parent=LTnewLM_350011800.1 LTnewLM_35 AUGUSTUS mRNA 261392 273932 0.48 + . ID=LTnewLM_350011800.2;Parent=LTnewLM_350011800 LTnewLM_35 AUGUSTUS CDS 261392 262965 0.48 + 0 ID=LTnewLM_350011800.2:CDS:1;Parent=LTnewLM_350011800.2 LTnewLM_35 AUGUSTUS CDS 263036 273932 0.48 + 1 ID=LTnewLM_350011800.2:CDS:2;Parent=LTnewLM_350011800.2 LTnewLM_35 AUGUSTUS mRNA 263106 269280 0.35 + . ID=LTnewLM_350011800.3;Parent=LTnewLM_350011800 LTnewLM_35 AUGUSTUS CDS 263106 269189 0.35 + 0 ID=LTnewLM_350011800.3:CDS:1;Parent=LTnewLM_350011800.3 LTnewLM_35 AUGUSTUS CDS 269278 269280 0.42 + 0 ID=LTnewLM_350011800.3:CDS:2;Parent=LTnewLM_350011800.3 ### LTnewLM_35 . polypeptide 261392 273932 . + . ID=LTnewLM_350011800.2:pep;Derives_from=LTnewLM_350011800.2;orthologous_to=LTnewLM_350011800.1,LTnewLM_350011800.3,LmjF.35.0670_mRNA;ortholog_cluster=OG0000245;product=term%3DDown-regulated in metastasis/Domain of unknown function (DUF6700)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07539|Pfam:PF20416 LTnewLM_35 Pfam protein_match 267389 268462 . + . Parent=LTnewLM_350011800.2:pep;Name=PF07539;signature_desc=Down-regulated in metastasis LTnewLM_35 Pfam protein_match 269651 269962 . + . Parent=LTnewLM_350011800.2:pep;Name=PF20416;signature_desc=Domain of unknown function (DUF6700) ### LTnewLM_35 . polypeptide 263106 269280 . + . ID=LTnewLM_350011800.3:pep;Derives_from=LTnewLM_350011800.3;orthologous_to=LTnewLM_350011800.1,LTnewLM_350011800.2,LmjF.35.0670_mRNA;ortholog_cluster=OG0000245;product=term%3DDown-regulated in metastasis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07539 LTnewLM_35 Pfam protein_match 267459 268532 . + . Parent=LTnewLM_350011800.3:pep;Name=PF07539;signature_desc=Down-regulated in metastasis ### LTnewLM_35 AUGUSTUS gene 275393 280033 1 + . ID=LTnewLM_350011900 LTnewLM_35 AUGUSTUS mRNA 275393 280033 1 + . ID=LTnewLM_350011900.1;Parent=LTnewLM_350011900 LTnewLM_35 AUGUSTUS CDS 275393 280033 1 + 0 ID=LTnewLM_350011900.1:CDS:1;Parent=LTnewLM_350011900.1 ### LTnewLM_35 . polypeptide 275393 280033 . + . ID=LTnewLM_350011900.1:pep;Derives_from=LTnewLM_350011900.1;orthologous_to=LmjF.35.0680_mRNA;ortholog_cluster=OG0005726;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 280568 282670 1 + . ID=LTnewLM_350012000 LTnewLM_35 AUGUSTUS mRNA 280568 282670 1 + . ID=LTnewLM_350012000.1;Parent=LTnewLM_350012000 LTnewLM_35 AUGUSTUS CDS 280568 282670 1 + 0 ID=LTnewLM_350012000.1:CDS:1;Parent=LTnewLM_350012000.1 ### LTnewLM_35 . polypeptide 280568 282670 . + . ID=LTnewLM_350012000.1:pep;Derives_from=LTnewLM_350012000.1;orthologous_to=LmjF.35.0690_mRNA;ortholog_cluster=OG0005727;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF13176|Pfam:PF13374|Pfam:PF13424|Pfam:PF13432;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 280826 280909 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 280826 280924 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 280829 280930 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 280829 281038 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 280943 281050 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 280961 281152 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 280982 281161 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 281387 281605 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 282032 282106 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 282032 282136 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 282038 282238 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 282278 282487 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 282293 282379 . + . Parent=LTnewLM_350012000.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 283294 284124 1 + . ID=LTnewLM_350012100 LTnewLM_35 AUGUSTUS mRNA 283294 284124 1 + . ID=LTnewLM_350012100.1;Parent=LTnewLM_350012100 LTnewLM_35 AUGUSTUS CDS 283294 284124 1 + 0 ID=LTnewLM_350012100.1:CDS:1;Parent=LTnewLM_350012100.1 ### LTnewLM_35 . polypeptide 283294 284124 . + . ID=LTnewLM_350012100.1:pep;Derives_from=LTnewLM_350012100.1;orthologous_to=LmjF.35.0700_mRNA;ortholog_cluster=OG0005728;product=term%3DATP synthase subunit D%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01813;Ontology_term=GO:0042626 LTnewLM_35 Pfam protein_match 283336 283983 . + . Parent=LTnewLM_350012100.1:pep;Name=PF01813;signature_desc=ATP synthase subunit D;Ontology_term=GO:0042626 ### LTnewLM_35 AUGUSTUS gene 286282 287877 1 + . ID=LTnewLM_350012200 LTnewLM_35 AUGUSTUS mRNA 286282 287877 1 + . ID=LTnewLM_350012200.1;Parent=LTnewLM_350012200 LTnewLM_35 AUGUSTUS CDS 286282 287877 1 + 0 ID=LTnewLM_350012200.1:CDS:1;Parent=LTnewLM_350012200.1 ### LTnewLM_35 . polypeptide 286282 287877 . + . ID=LTnewLM_350012200.1:pep;Derives_from=LTnewLM_350012200.1;orthologous_to=LmjF.35.0710_mRNA;ortholog_cluster=OG0005729;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_35 Pfam protein_match 286417 287487 . + . Parent=LTnewLM_350012200.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_35 AUGUSTUS gene 290461 291996 1 + . ID=LTnewLM_350012300 LTnewLM_35 AUGUSTUS mRNA 290461 291996 1 + . ID=LTnewLM_350012300.1;Parent=LTnewLM_350012300 LTnewLM_35 AUGUSTUS CDS 290461 291996 1 + 0 ID=LTnewLM_350012300.1:CDS:1;Parent=LTnewLM_350012300.1 ### LTnewLM_35 . polypeptide 290461 291996 . + . ID=LTnewLM_350012300.1:pep;Derives_from=LTnewLM_350012300.1;orthologous_to=LmjF.35.0720_mRNA;ortholog_cluster=OG0005730;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 292631 294820 1 + . ID=LTnewLM_350012400 LTnewLM_35 AUGUSTUS mRNA 292631 294820 1 + . ID=LTnewLM_350012400.1;Parent=LTnewLM_350012400 LTnewLM_35 AUGUSTUS CDS 292631 294820 1 + 0 ID=LTnewLM_350012400.1:CDS:1;Parent=LTnewLM_350012400.1 ### LTnewLM_35 . polypeptide 292631 294820 . + . ID=LTnewLM_350012400.1:pep;Derives_from=LTnewLM_350012400.1;orthologous_to=LmjF.35.0730_mRNA;ortholog_cluster=OG0005731;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 293573 294010 . + . Parent=LTnewLM_350012400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 297007 299784 1 + . ID=LTnewLM_350012500 LTnewLM_35 AUGUSTUS mRNA 297007 299784 1 + . ID=LTnewLM_350012500.1;Parent=LTnewLM_350012500 LTnewLM_35 AUGUSTUS CDS 297007 299784 1 + 0 ID=LTnewLM_350012500.1:CDS:1;Parent=LTnewLM_350012500.1 ### LTnewLM_35 . polypeptide 297007 299784 . + . ID=LTnewLM_350012500.1:pep;Derives_from=LTnewLM_350012500.1;orthologous_to=LmjF.35.0740_mRNA;ortholog_cluster=OG0005732;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 300353 301045 1 + . ID=LTnewLM_350012600 LTnewLM_35 AUGUSTUS mRNA 300353 301045 1 + . ID=LTnewLM_350012600.1;Parent=LTnewLM_350012600 LTnewLM_35 AUGUSTUS CDS 300353 301045 1 + 0 ID=LTnewLM_350012600.1:CDS:1;Parent=LTnewLM_350012600.1 ### LTnewLM_35 . polypeptide 300353 301045 . + . ID=LTnewLM_350012600.1:pep;Derives_from=LTnewLM_350012600.1;orthologous_to=LmjF.35.0750_mRNA;ortholog_cluster=OG0005733;product=term%3DProteasome activator pa28 beta subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02252;Ontology_term=GO:0008537 LTnewLM_35 Pfam protein_match 300551 300718 . + . Parent=LTnewLM_350012600.1:pep;Name=PF02252;signature_desc=Proteasome activator pa28 beta subunit;Ontology_term=GO:0008537 ### LTnewLM_35 AUGUSTUS gene 302939 304384 1 + . ID=LTnewLM_350012700 LTnewLM_35 AUGUSTUS mRNA 302939 304384 1 + . ID=LTnewLM_350012700.1;Parent=LTnewLM_350012700 LTnewLM_35 AUGUSTUS CDS 302939 304384 1 + 0 ID=LTnewLM_350012700.1:CDS:1;Parent=LTnewLM_350012700.1 ### LTnewLM_35 . polypeptide 302939 304384 . + . ID=LTnewLM_350012700.1:pep;Derives_from=LTnewLM_350012700.1;orthologous_to=LmjF.35.0760_mRNA;ortholog_cluster=OG0005734;product=term%3DCBS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00571 LTnewLM_35 Pfam protein_match 303407 303550 . + . Parent=LTnewLM_350012700.1:pep;Name=PF00571;signature_desc=CBS domain LTnewLM_35 Pfam protein_match 304001 304144 . + . Parent=LTnewLM_350012700.1:pep;Name=PF00571;signature_desc=CBS domain ### LTnewLM_35 AUGUSTUS gene 306472 308088 1 + . ID=LTnewLM_350012800 LTnewLM_35 AUGUSTUS mRNA 306472 308088 1 + . ID=LTnewLM_350012800.1;Parent=LTnewLM_350012800 LTnewLM_35 AUGUSTUS CDS 306472 308088 1 + 0 ID=LTnewLM_350012800.1:CDS:1;Parent=LTnewLM_350012800.1 ### LTnewLM_35 . polypeptide 306472 308088 . + . ID=LTnewLM_350012800.1:pep;Derives_from=LTnewLM_350012800.1;orthologous_to=LmjF.35.0770_mRNA;ortholog_cluster=OG0005735;product=term%3DRibosomal RNA adenine dimethylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00398 LTnewLM_35 Pfam protein_match 306838 307116 . + . Parent=LTnewLM_350012800.1:pep;Name=PF00398;signature_desc=Ribosomal RNA adenine dimethylase LTnewLM_35 Pfam protein_match 307462 307968 . + . Parent=LTnewLM_350012800.1:pep;Name=PF00398;signature_desc=Ribosomal RNA adenine dimethylase ### LTnewLM_35 AUGUSTUS gene 309874 312249 0.71 + . ID=LTnewLM_350012900 LTnewLM_35 AUGUSTUS mRNA 309874 312249 0.71 + . ID=LTnewLM_350012900.1;Parent=LTnewLM_350012900 LTnewLM_35 AUGUSTUS CDS 309874 310589 0.71 + 0 ID=LTnewLM_350012900.1:CDS:1;Parent=LTnewLM_350012900.1 LTnewLM_35 AUGUSTUS CDS 310671 312249 0.72 + 1 ID=LTnewLM_350012900.1:CDS:2;Parent=LTnewLM_350012900.1 ### LTnewLM_35 . polypeptide 309874 312249 . + . ID=LTnewLM_350012900.1:pep;Derives_from=LTnewLM_350012900.1;orthologous_to=LmjF.35.0780_mRNA;ortholog_cluster=OG0005736;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 313085 314644 1 + . ID=LTnewLM_350013000 LTnewLM_35 AUGUSTUS mRNA 313085 314644 1 + . ID=LTnewLM_350013000.1;Parent=LTnewLM_350013000 LTnewLM_35 AUGUSTUS CDS 313085 314644 1 + 0 ID=LTnewLM_350013000.1:CDS:1;Parent=LTnewLM_350013000.1 ### LTnewLM_35 . polypeptide 313085 314644 . + . ID=LTnewLM_350013000.1:pep;Derives_from=LTnewLM_350013000.1;orthologous_to=LmjF.35.0790_mRNA;ortholog_cluster=OG0005737;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_35 Pfam protein_match 313157 313606 . + . Parent=LTnewLM_350013000.1:pep;Name=PF00022;signature_desc=Actin LTnewLM_35 Pfam protein_match 313655 314629 . + . Parent=LTnewLM_350013000.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_35 AUGUSTUS gene 317440 320466 1 + . ID=LTnewLM_350013100 LTnewLM_35 AUGUSTUS mRNA 317440 320466 1 + . ID=LTnewLM_350013100.1;Parent=LTnewLM_350013100 LTnewLM_35 AUGUSTUS CDS 317440 320466 1 + 0 ID=LTnewLM_350013100.1:CDS:1;Parent=LTnewLM_350013100.1 ### LTnewLM_35 . polypeptide 317440 320466 . + . ID=LTnewLM_350013100.1:pep;Derives_from=LTnewLM_350013100.1;orthologous_to=LmjF.35.0800_mRNA;ortholog_cluster=OG0005738;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 323155 328125 1 + . ID=LTnewLM_350013200 LTnewLM_35 AUGUSTUS mRNA 323155 328125 1 + . ID=LTnewLM_350013200.1;Parent=LTnewLM_350013200 LTnewLM_35 AUGUSTUS CDS 323155 328125 1 + 0 ID=LTnewLM_350013200.1:CDS:1;Parent=LTnewLM_350013200.1 ### LTnewLM_35 . polypeptide 323155 328125 . + . ID=LTnewLM_350013200.1:pep;Derives_from=LTnewLM_350013200.1;orthologous_to=LmjF.35.0810_mRNA;ortholog_cluster=OG0005739;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 328758 329996 1 + . ID=LTnewLM_350013300 LTnewLM_35 AUGUSTUS mRNA 328758 329996 1 + . ID=LTnewLM_350013300.1;Parent=LTnewLM_350013300 LTnewLM_35 AUGUSTUS CDS 328758 329996 1 + 0 ID=LTnewLM_350013300.1:CDS:1;Parent=LTnewLM_350013300.1 ### LTnewLM_35 . polypeptide 328758 329996 . + . ID=LTnewLM_350013300.1:pep;Derives_from=LTnewLM_350013300.1;orthologous_to=LmjF.35.0820_mRNA;ortholog_cluster=OG0005740;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_35 Pfam protein_match 328869 329957 . + . Parent=LTnewLM_350013300.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_35 AUGUSTUS gene 334626 338342 1 + . ID=LTnewLM_350013400 LTnewLM_35 AUGUSTUS mRNA 334626 338342 1 + . ID=LTnewLM_350013400.1;Parent=LTnewLM_350013400 LTnewLM_35 AUGUSTUS CDS 334626 338342 1 + 0 ID=LTnewLM_350013400.1:CDS:1;Parent=LTnewLM_350013400.1 ### LTnewLM_35 . polypeptide 334626 338342 . + . ID=LTnewLM_350013400.1:pep;Derives_from=LTnewLM_350013400.1;orthologous_to=LmjF.35.0830_mRNA;ortholog_cluster=OG0005741;product=term%3DApbE family/Alanine dehydrogenase/PNT%2C C-terminal domain/Pyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/Glucose inhibited division protein A/FAD binding domain/NAD(P)-binding Rossmann-like domain/Oxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02424|Pfam:PF01262|Pfam:PF07992|Pfam:PF01266|Pfam:PF01134|Pfam:PF12831|Pfam:PF00890|Pfam:PF13450|Pfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491,GO:0050660,GO:0008033 LTnewLM_35 Pfam protein_match 334962 335930 . + . Parent=LTnewLM_350013400.1:pep;Name=PF02424;signature_desc=ApbE family LTnewLM_35 Pfam protein_match 336039 336161 . + . Parent=LTnewLM_350013400.1:pep;Name=PF01262;signature_desc=Alanine dehydrogenase/PNT%2C C-terminal domain LTnewLM_35 Pfam protein_match 336069 336704 . + . Parent=LTnewLM_350013400.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 336069 336713 . + . Parent=LTnewLM_350013400.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 336072 336167 . + . Parent=LTnewLM_350013400.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_35 Pfam protein_match 336072 336191 . + . Parent=LTnewLM_350013400.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_35 Pfam protein_match 336072 337487 . + . Parent=LTnewLM_350013400.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_35 Pfam protein_match 336078 336203 . + . Parent=LTnewLM_350013400.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_35 Pfam protein_match 337632 337868 . + . Parent=LTnewLM_350013400.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain LTnewLM_35 Pfam protein_match 337944 338267 . + . Parent=LTnewLM_350013400.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 339210 340487 1 + . ID=LTnewLM_350013500 LTnewLM_35 AUGUSTUS mRNA 339210 340487 1 + . ID=LTnewLM_350013500.1;Parent=LTnewLM_350013500 LTnewLM_35 AUGUSTUS CDS 339210 340487 1 + 0 ID=LTnewLM_350013500.1:CDS:1;Parent=LTnewLM_350013500.1 ### LTnewLM_35 . polypeptide 339210 340487 . + . ID=LTnewLM_350013500.1:pep;Derives_from=LTnewLM_350013500.1;orthologous_to=LmjF.35.0840_mRNA;ortholog_cluster=OG0005742;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 341255 342411 . + . ID=LTnewLM_350013600.1:pep;Derives_from=LTnewLM_350013600.1;orthologous_to=LTnewLM_350013600.2,LmjF.35.0850_mRNA;ortholog_cluster=OG0000463;product=term%3DProtein of unknown function (DUF2838)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10998 LTnewLM_35 Pfam protein_match 341474 341641 . + . Parent=LTnewLM_350013600.1:pep;Name=PF10998;signature_desc=Protein of unknown function (DUF2838) LTnewLM_35 Pfam protein_match 341960 342067 . + . Parent=LTnewLM_350013600.1:pep;Name=PF10998;signature_desc=Protein of unknown function (DUF2838) ### LTnewLM_35 AUGUSTUS gene 341255 343084 0.88 + . ID=LTnewLM_350013600 LTnewLM_35 AUGUSTUS mRNA 341255 342411 0.25 + . ID=LTnewLM_350013600.1;Parent=LTnewLM_350013600 LTnewLM_35 AUGUSTUS CDS 341255 342267 0.25 + 0 ID=LTnewLM_350013600.1:CDS:1;Parent=LTnewLM_350013600.1 LTnewLM_35 AUGUSTUS CDS 342360 342411 0.38 + 1 ID=LTnewLM_350013600.1:CDS:2;Parent=LTnewLM_350013600.1 LTnewLM_35 AUGUSTUS mRNA 341255 343084 0.63 + . ID=LTnewLM_350013600.2;Parent=LTnewLM_350013600 LTnewLM_35 AUGUSTUS CDS 341255 343084 0.63 + 0 ID=LTnewLM_350013600.2:CDS:1;Parent=LTnewLM_350013600.2 ### LTnewLM_35 . polypeptide 341255 343084 . + . ID=LTnewLM_350013600.2:pep;Derives_from=LTnewLM_350013600.2;orthologous_to=LTnewLM_350013600.1,LmjF.35.0850_mRNA;ortholog_cluster=OG0000463;product=term%3DProtein of unknown function (DUF2838)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10998 LTnewLM_35 Pfam protein_match 341477 341638 . + . Parent=LTnewLM_350013600.2:pep;Name=PF10998;signature_desc=Protein of unknown function (DUF2838) LTnewLM_35 Pfam protein_match 341960 342067 . + . Parent=LTnewLM_350013600.2:pep;Name=PF10998;signature_desc=Protein of unknown function (DUF2838) ### LTnewLM_35 AUGUSTUS gene 343642 344925 1 + . ID=LTnewLM_350013700 LTnewLM_35 AUGUSTUS mRNA 343642 344925 1 + . ID=LTnewLM_350013700.1;Parent=LTnewLM_350013700 LTnewLM_35 AUGUSTUS CDS 343642 344925 1 + 0 ID=LTnewLM_350013700.1:CDS:1;Parent=LTnewLM_350013700.1 ### LTnewLM_35 . polypeptide 343642 344925 . + . ID=LTnewLM_350013700.1:pep;Derives_from=LTnewLM_350013700.1;orthologous_to=LmjF.35.0860_mRNA;ortholog_cluster=OG0005743;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 345669 348443 1 + . ID=LTnewLM_350013800 LTnewLM_35 AUGUSTUS mRNA 345669 348443 1 + . ID=LTnewLM_350013800.1;Parent=LTnewLM_350013800 LTnewLM_35 AUGUSTUS CDS 345669 348443 1 + 0 ID=LTnewLM_350013800.1:CDS:1;Parent=LTnewLM_350013800.1 ### LTnewLM_35 . polypeptide 345669 348443 . + . ID=LTnewLM_350013800.1:pep;Derives_from=LTnewLM_350013800.1;orthologous_to=LmjF.35.0870_mRNA;ortholog_cluster=OG0005744;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 348922 350685 . + . ID=LTnewLM_350013900;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.0880_0 LTnewLM_35 Liftoff mRNA 348922 350685 . + . ID=LTnewLM_350013900.1;Parent=LTnewLM_350013900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 348922 350685 . + 0 ID=LTnewLM_350013900.1:CDS:1;Parent=LTnewLM_350013900.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 348922 350685 . + . ID=LTnewLM_350013900.1:pep;Derives_from=LTnewLM_350013900.1;orthologous_to=LmjF.35.0880_mRNA;ortholog_cluster=OG0005745;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 351181 351678 1 + . ID=LTnewLM_350014000 LTnewLM_35 AUGUSTUS mRNA 351181 351678 1 + . ID=LTnewLM_350014000.1;Parent=LTnewLM_350014000 LTnewLM_35 AUGUSTUS CDS 351181 351678 1 + 0 ID=LTnewLM_350014000.1:CDS:1;Parent=LTnewLM_350014000.1 ### LTnewLM_35 . polypeptide 351181 351678 . + . ID=LTnewLM_350014000.1:pep;Derives_from=LTnewLM_350014000.1;orthologous_to=LmjF.35.0890_mRNA;ortholog_cluster=OG0005746;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 352961 353668 1 + . ID=LTnewLM_350014100 LTnewLM_35 AUGUSTUS mRNA 352961 353668 1 + . ID=LTnewLM_350014100.1;Parent=LTnewLM_350014100 LTnewLM_35 AUGUSTUS CDS 352961 353668 1 + 0 ID=LTnewLM_350014100.1:CDS:1;Parent=LTnewLM_350014100.1 ### LTnewLM_35 . polypeptide 352961 353668 . + . ID=LTnewLM_350014100.1:pep;Derives_from=LTnewLM_350014100.1;orthologous_to=LmjF.35.0900_mRNA;ortholog_cluster=OG0005747;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 355243 361206 . + . ID=LTnewLM_350014200:pseudogene;coverage=0.994;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0910_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 355243 361206 . + . ID=LTnewLM_350014200.1;Parent=LTnewLM_350014200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 355243 361206 . + . ID=LTnewLM_350014200.1:pseudogenic_exon:1;Parent=LTnewLM_350014200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 355243 361206 . + . ID=LTnewLM_350014200.1:pep;Derives_from=LTnewLM_350014200.1;orthologous_to=LmjF.35.0910_mRNA;ortholog_cluster=OG0007653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 362675 366727 1 + . ID=LTnewLM_350014300 LTnewLM_35 AUGUSTUS mRNA 362675 366727 1 + . ID=LTnewLM_350014300.1;Parent=LTnewLM_350014300 LTnewLM_35 AUGUSTUS CDS 362675 366727 1 + 0 ID=LTnewLM_350014300.1:CDS:1;Parent=LTnewLM_350014300.1 ### LTnewLM_35 . polypeptide 362675 366727 . + . ID=LTnewLM_350014300.1:pep;Derives_from=LTnewLM_350014300.1;orthologous_to=LmjF.35.0920_mRNA;ortholog_cluster=OG0005748;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 369743 370471 1 + . ID=LTnewLM_350014400 LTnewLM_35 AUGUSTUS mRNA 369743 370471 1 + . ID=LTnewLM_350014400.1;Parent=LTnewLM_350014400 LTnewLM_35 AUGUSTUS CDS 369743 370471 1 + 0 ID=LTnewLM_350014400.1:CDS:1;Parent=LTnewLM_350014400.1 ### LTnewLM_35 . polypeptide 369743 370471 . + . ID=LTnewLM_350014400.1:pep;Derives_from=LTnewLM_350014400.1;orthologous_to=LmjF.35.0930_mRNA;ortholog_cluster=OG0005749;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 371540 372289 1 + . ID=LTnewLM_350014500 LTnewLM_35 AUGUSTUS mRNA 371540 372289 1 + . ID=LTnewLM_350014500.1;Parent=LTnewLM_350014500 LTnewLM_35 AUGUSTUS CDS 371540 372289 1 + 0 ID=LTnewLM_350014500.1:CDS:1;Parent=LTnewLM_350014500.1 ### LTnewLM_35 . polypeptide 371540 372289 . + . ID=LTnewLM_350014500.1:pep;Derives_from=LTnewLM_350014500.1;orthologous_to=LmjF.35.0940_mRNA;ortholog_cluster=OG0005750;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 373691 374932 1 + . ID=LTnewLM_350014600 LTnewLM_35 AUGUSTUS mRNA 373691 374932 1 + . ID=LTnewLM_350014600.1;Parent=LTnewLM_350014600 LTnewLM_35 AUGUSTUS CDS 373691 374932 1 + 0 ID=LTnewLM_350014600.1:CDS:1;Parent=LTnewLM_350014600.1 ### LTnewLM_35 . polypeptide 373691 374932 . + . ID=LTnewLM_350014600.1:pep;Derives_from=LTnewLM_350014600.1;orthologous_to=LmjF.35.0950_mRNA;ortholog_cluster=OG0005751;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_35 Pfam protein_match 374549 374803 . + . Parent=LTnewLM_350014600.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_35 AUGUSTUS gene 378504 380882 1 + . ID=LTnewLM_350014700 LTnewLM_35 AUGUSTUS mRNA 378504 380882 1 + . ID=LTnewLM_350014700.1;Parent=LTnewLM_350014700 LTnewLM_35 AUGUSTUS CDS 378504 380882 1 + 0 ID=LTnewLM_350014700.1:CDS:1;Parent=LTnewLM_350014700.1 ### LTnewLM_35 . polypeptide 378504 380882 . + . ID=LTnewLM_350014700.1:pep;Derives_from=LTnewLM_350014700.1;orthologous_to=LmjF.35.0960_mRNA;ortholog_cluster=OG0005752;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 382138 383253 1 + . ID=LTnewLM_350014800 LTnewLM_35 AUGUSTUS mRNA 382138 383253 1 + . ID=LTnewLM_350014800.1;Parent=LTnewLM_350014800 LTnewLM_35 AUGUSTUS CDS 382138 383253 1 + 0 ID=LTnewLM_350014800.1:CDS:1;Parent=LTnewLM_350014800.1 ### LTnewLM_35 . polypeptide 382138 383253 . + . ID=LTnewLM_350014800.1:pep;Derives_from=LTnewLM_350014800.1;orthologous_to=LmjF.35.0970_mRNA;ortholog_cluster=OG0005753;product=term%3DAldose 1-epimerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01263;Ontology_term=GO:0005975,GO:0016853 LTnewLM_35 Pfam protein_match 382231 383226 . + . Parent=LTnewLM_350014800.1:pep;Name=PF01263;signature_desc=Aldose 1-epimerase;Ontology_term=GO:0016853,GO:0005975 ### LTnewLM_35 AUGUSTUS gene 386581 387714 1 + . ID=LTnewLM_350014900 LTnewLM_35 AUGUSTUS mRNA 386581 387714 1 + . ID=LTnewLM_350014900.1;Parent=LTnewLM_350014900 LTnewLM_35 AUGUSTUS CDS 386581 387714 1 + 0 ID=LTnewLM_350014900.1:CDS:1;Parent=LTnewLM_350014900.1 ### LTnewLM_35 . polypeptide 386581 387714 . + . ID=LTnewLM_350014900.1:pep;Derives_from=LTnewLM_350014900.1;orthologous_to=LmjF.35.0980_mRNA;ortholog_cluster=OG0005754;product=term%3DAldose 1-epimerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01263;Ontology_term=GO:0005975,GO:0016853 LTnewLM_35 Pfam protein_match 386629 387669 . + . Parent=LTnewLM_350014900.1:pep;Name=PF01263;signature_desc=Aldose 1-epimerase;Ontology_term=GO:0016853,GO:0005975 ### LTnewLM_35 . pseudogene 390237 392771 . + . ID=LTnewLM_350015000:pseudogene;coverage=0.980;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.0990_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 390237 392771 . + . ID=LTnewLM_350015000.1;Parent=LTnewLM_350015000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 390237 392771 . + . ID=LTnewLM_350015000.1:pseudogenic_exon:1;Parent=LTnewLM_350015000.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 390237 392771 . + . ID=LTnewLM_350015000.1:pep;Derives_from=LTnewLM_350015000.1;orthologous_to=LmjF.35.0990_mRNA;ortholog_cluster=OG0007654;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 393865 394857 1 + . ID=LTnewLM_350015100 LTnewLM_35 AUGUSTUS mRNA 393865 394857 1 + . ID=LTnewLM_350015100.1;Parent=LTnewLM_350015100 LTnewLM_35 AUGUSTUS CDS 393865 394857 1 + 0 ID=LTnewLM_350015100.1:CDS:1;Parent=LTnewLM_350015100.1 ### LTnewLM_35 . polypeptide 393865 394857 . + . ID=LTnewLM_350015100.1:pep;Derives_from=LTnewLM_350015100.1;orthologous_to=LmjF.35.1000_mRNA;ortholog_cluster=OG0005755;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF17667;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 393928 394572 . + . Parent=LTnewLM_350015100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 393931 394389 . + . Parent=LTnewLM_350015100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 394231 394524 . + . Parent=LTnewLM_350015100.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_35 AUGUSTUS gene 397366 398427 1 + . ID=LTnewLM_350015200 LTnewLM_35 AUGUSTUS mRNA 397366 398427 1 + . ID=LTnewLM_350015200.1;Parent=LTnewLM_350015200 LTnewLM_35 AUGUSTUS CDS 397366 398427 1 + 0 ID=LTnewLM_350015200.1:CDS:1;Parent=LTnewLM_350015200.1 ### LTnewLM_35 . polypeptide 397366 398427 . + . ID=LTnewLM_350015200.1:pep;Derives_from=LTnewLM_350015200.1;orthologous_to=LmjF.35.1010_mRNA;ortholog_cluster=OG0005756;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF17667;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 397396 398049 . + . Parent=LTnewLM_350015200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 397402 398076 . + . Parent=LTnewLM_350015200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 397726 397995 . + . Parent=LTnewLM_350015200.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_35 AUGUSTUS gene 406720 408018 1 + . ID=LTnewLM_350015300 LTnewLM_35 AUGUSTUS mRNA 406720 408018 1 + . ID=LTnewLM_350015300.1;Parent=LTnewLM_350015300 LTnewLM_35 AUGUSTUS CDS 406720 408018 1 + 0 ID=LTnewLM_350015300.1:CDS:1;Parent=LTnewLM_350015300.1 ### LTnewLM_35 . polypeptide 406720 408018 . + . ID=LTnewLM_350015300.1:pep;Derives_from=LTnewLM_350015300.1;orthologous_to=LmjF.35.1020_mRNA;ortholog_cluster=OG0005757;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 407122 407196 . + . Parent=LTnewLM_350015300.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 420912 421565 1 + . ID=LTnewLM_350015400 LTnewLM_35 AUGUSTUS mRNA 420912 421565 1 + . ID=LTnewLM_350015400.1;Parent=LTnewLM_350015400 LTnewLM_35 AUGUSTUS CDS 420912 421565 1 + 0 ID=LTnewLM_350015400.1:CDS:1;Parent=LTnewLM_350015400.1 ### LTnewLM_35 . polypeptide 420912 421565 . + . ID=LTnewLM_350015400.1:pep;Derives_from=LTnewLM_350015400.1;orthologous_to=LmjF.35.1030_mRNA;ortholog_cluster=OG0005758;product=term%3DCupin superfamily (DUF985)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06172 LTnewLM_35 Pfam protein_match 420957 421451 . + . Parent=LTnewLM_350015400.1:pep;Name=PF06172;signature_desc=Cupin superfamily (DUF985) ### LTnewLM_35 AUGUSTUS gene 422364 423305 1 + . ID=LTnewLM_350015500 LTnewLM_35 AUGUSTUS mRNA 422364 423305 1 + . ID=LTnewLM_350015500.1;Parent=LTnewLM_350015500 LTnewLM_35 AUGUSTUS CDS 422364 423305 1 + 0 ID=LTnewLM_350015500.1:CDS:1;Parent=LTnewLM_350015500.1 ### LTnewLM_35 . polypeptide 422364 423305 . + . ID=LTnewLM_350015500.1:pep;Derives_from=LTnewLM_350015500.1;orthologous_to=LmjF.35.1040_mRNA;ortholog_cluster=OG0005759;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 422487 422564 . + . Parent=LTnewLM_350015500.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 436606 438072 1 + . ID=LTnewLM_350015600 LTnewLM_35 AUGUSTUS mRNA 436606 438072 1 + . ID=LTnewLM_350015600.1;Parent=LTnewLM_350015600 LTnewLM_35 AUGUSTUS CDS 436606 438072 1 + 0 ID=LTnewLM_350015600.1:CDS:1;Parent=LTnewLM_350015600.1 ### LTnewLM_35 . polypeptide 436606 438072 . + . ID=LTnewLM_350015600.1:pep;Derives_from=LTnewLM_350015600.1;orthologous_to=LmjF.35.1050_mRNA;ortholog_cluster=OG0005760;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 436690 437583 . + . Parent=LTnewLM_350015600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 436690 437601 . + . Parent=LTnewLM_350015600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 440546 442288 1 + . ID=LTnewLM_350015700 LTnewLM_35 AUGUSTUS mRNA 440546 442288 1 + . ID=LTnewLM_350015700.1;Parent=LTnewLM_350015700 LTnewLM_35 AUGUSTUS CDS 440546 442288 1 + 0 ID=LTnewLM_350015700.1:CDS:1;Parent=LTnewLM_350015700.1 ### LTnewLM_35 . polypeptide 440546 442288 . + . ID=LTnewLM_350015700.1:pep;Derives_from=LTnewLM_350015700.1;orthologous_to=LmjF.35.1060_mRNA;ortholog_cluster=OG0005761;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 443733 446267 1 + . ID=LTnewLM_350015800 LTnewLM_35 AUGUSTUS mRNA 443733 446267 1 + . ID=LTnewLM_350015800.1;Parent=LTnewLM_350015800 LTnewLM_35 AUGUSTUS CDS 443733 446267 1 + 0 ID=LTnewLM_350015800.1:CDS:1;Parent=LTnewLM_350015800.1 ### LTnewLM_35 . polypeptide 443733 446267 . + . ID=LTnewLM_350015800.1:pep;Derives_from=LTnewLM_350015800.1;orthologous_to=LmjF.35.1080_mRNA;ortholog_cluster=OG0005762;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 447490 450687 1 + . ID=LTnewLM_350015900 LTnewLM_35 AUGUSTUS mRNA 447490 450687 1 + . ID=LTnewLM_350015900.1;Parent=LTnewLM_350015900 LTnewLM_35 AUGUSTUS CDS 447490 450687 1 + 0 ID=LTnewLM_350015900.1:CDS:1;Parent=LTnewLM_350015900.1 ### LTnewLM_35 . polypeptide 447490 450687 . + . ID=LTnewLM_350015900.1:pep;Derives_from=LTnewLM_350015900.1;orthologous_to=LmjF.35.1090_mRNA;ortholog_cluster=OG0005763;product=term%3DKRI1-like family/KRI1-like family C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05178|Pfam:PF12936 LTnewLM_35 Pfam protein_match 449404 449742 . + . Parent=LTnewLM_350015900.1:pep;Name=PF05178;signature_desc=KRI1-like family LTnewLM_35 Pfam protein_match 450067 450321 . + . Parent=LTnewLM_350015900.1:pep;Name=PF12936;signature_desc=KRI1-like family C-terminal ### LTnewLM_35 AUGUSTUS gene 452015 454060 1 + . ID=LTnewLM_350016000 LTnewLM_35 AUGUSTUS mRNA 452015 454060 1 + . ID=LTnewLM_350016000.1;Parent=LTnewLM_350016000 LTnewLM_35 AUGUSTUS CDS 452015 454060 1 + 0 ID=LTnewLM_350016000.1:CDS:1;Parent=LTnewLM_350016000.1 ### LTnewLM_35 . polypeptide 452015 454060 . + . ID=LTnewLM_350016000.1:pep;Derives_from=LTnewLM_350016000.1;orthologous_to=LmjF.35.1100_mRNA;ortholog_cluster=OG0005764;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 455527 456167 . + . ID=LTnewLM_350016100.1:pep;Derives_from=LTnewLM_350016100.1;orthologous_to=LTnewLM_350016100.2,LmjF.35.1110_mRNA;ortholog_cluster=OG0000464;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 455527 456714 1.63 + . ID=LTnewLM_350016100 LTnewLM_35 AUGUSTUS mRNA 455527 456167 0.63 + . ID=LTnewLM_350016100.1;Parent=LTnewLM_350016100 LTnewLM_35 AUGUSTUS CDS 455527 456080 0.99 + 0 ID=LTnewLM_350016100.1:CDS:1;Parent=LTnewLM_350016100.1 LTnewLM_35 AUGUSTUS CDS 456146 456167 0.63 + 1 ID=LTnewLM_350016100.1:CDS:2;Parent=LTnewLM_350016100.1 LTnewLM_35 AUGUSTUS mRNA 455527 456714 1 + . ID=LTnewLM_350016100.2;Parent=LTnewLM_350016100 LTnewLM_35 AUGUSTUS CDS 455527 456714 1 + 0 ID=LTnewLM_350016100.2:CDS:1;Parent=LTnewLM_350016100.2 ### LTnewLM_35 . polypeptide 455527 456714 . + . ID=LTnewLM_350016100.2:pep;Derives_from=LTnewLM_350016100.2;orthologous_to=LTnewLM_350016100.1,LmjF.35.1110_mRNA;ortholog_cluster=OG0000464;product=term%3DRdx family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10262;Ontology_term=GO:0045454,GO:0008430 LTnewLM_35 Pfam protein_match 456238 456651 . + . Parent=LTnewLM_350016100.2:pep;Name=PF10262;signature_desc=Rdx family;Ontology_term=GO:0008430,GO:0045454 ### LTnewLM_35 . pseudogene 457788 458894 . + . ID=LTnewLM_350016200:pseudogene;coverage=0.997;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1120_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 457788 458894 . + . ID=LTnewLM_350016200.1;Parent=LTnewLM_350016200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 457788 458894 . + . ID=LTnewLM_350016200.1:pseudogenic_exon:1;Parent=LTnewLM_350016200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 457788 458894 . + . ID=LTnewLM_350016200.1:pep;Derives_from=LTnewLM_350016200.1;orthologous_to=LmjF.35.1120_mRNA;ortholog_cluster=OG0007655;product=term%3DRdx family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10262;Ontology_term=GO:0045454,GO:0008430 LTnewLM_35 Pfam protein_match 458466 458837 . + . Parent=LTnewLM_350016200.1:pep;Name=PF10262;signature_desc=Rdx family;Ontology_term=GO:0008430,GO:0045454 ### LTnewLM_35 AUGUSTUS gene 461746 464337 1 + . ID=LTnewLM_350016300 LTnewLM_35 AUGUSTUS mRNA 461746 464337 1 + . ID=LTnewLM_350016300.1;Parent=LTnewLM_350016300 LTnewLM_35 AUGUSTUS CDS 461746 464337 1 + 0 ID=LTnewLM_350016300.1:CDS:1;Parent=LTnewLM_350016300.1 ### LTnewLM_35 . polypeptide 461746 464337 . + . ID=LTnewLM_350016300.1:pep;Derives_from=LTnewLM_350016300.1;orthologous_to=LTnewLM_350016400.1,LmjF.35.1130_mRNA,LmjF.35.1140_mRNA;ortholog_cluster=OG0000246;product=term%3DOligosaccharyl transferase STT3 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02516;Ontology_term=GO:0006486,GO:0016020,GO:0004576 LTnewLM_35 Pfam protein_match 461956 463152 . + . Parent=LTnewLM_350016300.1:pep;Name=PF02516;signature_desc=Oligosaccharyl transferase STT3 subunit;Ontology_term=GO:0004576,GO:0006486,GO:0016020 ### LTnewLM_35 AUGUSTUS gene 466895 469414 1 + . ID=LTnewLM_350016400 LTnewLM_35 AUGUSTUS mRNA 466895 469414 1 + . ID=LTnewLM_350016400.1;Parent=LTnewLM_350016400 LTnewLM_35 AUGUSTUS CDS 466895 469414 1 + 0 ID=LTnewLM_350016400.1:CDS:1;Parent=LTnewLM_350016400.1 ### LTnewLM_35 . polypeptide 466895 469414 . + . ID=LTnewLM_350016400.1:pep;Derives_from=LTnewLM_350016400.1;orthologous_to=LTnewLM_350016300.1,LmjF.35.1130_mRNA,LmjF.35.1140_mRNA;ortholog_cluster=OG0000246;product=term%3DOligosaccharyl transferase STT3 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02516;Ontology_term=GO:0006486,GO:0016020,GO:0004576 LTnewLM_35 Pfam protein_match 467105 468313 . + . Parent=LTnewLM_350016400.1:pep;Name=PF02516;signature_desc=Oligosaccharyl transferase STT3 subunit;Ontology_term=GO:0004576,GO:0006486,GO:0016020 ### LTnewLM_35 AUGUSTUS gene 471262 471972 1 + . ID=LTnewLM_350016500 LTnewLM_35 AUGUSTUS mRNA 471262 471972 1 + . ID=LTnewLM_350016500.1;Parent=LTnewLM_350016500 LTnewLM_35 AUGUSTUS CDS 471262 471972 1 + 0 ID=LTnewLM_350016500.1:CDS:1;Parent=LTnewLM_350016500.1 ### LTnewLM_35 . polypeptide 471262 471972 . + . ID=LTnewLM_350016500.1:pep;Derives_from=LTnewLM_350016500.1;orthologous_to=LTnewLM_190019200.1,LTnewLM_230013500.1,LTnewLM_230013500.2,LTnewLM_270022100.1,LTnewLM_360029300.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 473826 476320 . + . ID=LTnewLM_350016600:pseudogene;coverage=0.996;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1150_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 473826 476320 . + . ID=LTnewLM_350016600.1;Parent=LTnewLM_350016600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 473826 476320 . + . ID=LTnewLM_350016600.1:pseudogenic_exon:1;Parent=LTnewLM_350016600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 473826 476320 . + . ID=LTnewLM_350016600.1:pep;Derives_from=LTnewLM_350016600.1;orthologous_to=LmjF.35.1150_mRNA;ortholog_cluster=OG0007656;product=term%3DOligosaccharyl transferase STT3 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02516;Ontology_term=GO:0006486,GO:0016020,GO:0004576 LTnewLM_35 Pfam protein_match 474045 475679 . + . Parent=LTnewLM_350016600.1:pep;Name=PF02516;signature_desc=Oligosaccharyl transferase STT3 subunit;Ontology_term=GO:0004576,GO:0006486,GO:0016020 ### LTnewLM_35 . pseudogene 477958 480528 . + . ID=LTnewLM_350016700:pseudogene;coverage=0.997;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1160_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 477958 480528 . + . ID=LTnewLM_350016700.1;Parent=LTnewLM_350016700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 477958 480528 . + . ID=LTnewLM_350016700.1:pseudogenic_exon:1;Parent=LTnewLM_350016700.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 477958 480528 . + . ID=LTnewLM_350016700.1:pep;Derives_from=LTnewLM_350016700.1;orthologous_to=LmjF.35.1160_mRNA;ortholog_cluster=OG0007657;product=term%3DOligosaccharyl transferase STT3 subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02516;Ontology_term=GO:0006486,GO:0016020,GO:0004576 LTnewLM_35 Pfam protein_match 478222 479439 . + . Parent=LTnewLM_350016700.1:pep;Name=PF02516;signature_desc=Oligosaccharyl transferase STT3 subunit;Ontology_term=GO:0004576,GO:0006486,GO:0016020 ### LTnewLM_35 AUGUSTUS gene 481528 483357 1 + . ID=LTnewLM_350016800 LTnewLM_35 AUGUSTUS mRNA 481528 483357 1 + . ID=LTnewLM_350016800.1;Parent=LTnewLM_350016800 LTnewLM_35 AUGUSTUS CDS 481528 483357 1 + 0 ID=LTnewLM_350016800.1:CDS:1;Parent=LTnewLM_350016800.1 ### LTnewLM_35 . polypeptide 481528 483357 . + . ID=LTnewLM_350016800.1:pep;Derives_from=LTnewLM_350016800.1;orthologous_to=LmjF.35.1170_mRNA;ortholog_cluster=OG0005765;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_35 Pfam protein_match 482536 482805 . + . Parent=LTnewLM_350016800.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_35 AUGUSTUS gene 484234 487677 1 + . ID=LTnewLM_350016900 LTnewLM_35 AUGUSTUS mRNA 484234 487677 1 + . ID=LTnewLM_350016900.1;Parent=LTnewLM_350016900 LTnewLM_35 AUGUSTUS CDS 484234 487677 1 + 0 ID=LTnewLM_350016900.1:CDS:1;Parent=LTnewLM_350016900.1 ### LTnewLM_35 . polypeptide 484234 487677 . + . ID=LTnewLM_350016900.1:pep;Derives_from=LTnewLM_350016900.1;orthologous_to=LmjF.35.1180_mRNA;ortholog_cluster=OG0005766;product=term%3DApbE family/Alanine dehydrogenase/PNT%2C C-terminal domain/Pyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/Glucose inhibited division protein A/FAD binding domain/NAD(P)-binding Rossmann-like domain/Oxidoreductase FAD-binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02424|Pfam:PF01262|Pfam:PF07992|Pfam:PF01266|Pfam:PF01134|Pfam:PF12831|Pfam:PF00890|Pfam:PF13450|Pfam:PF00970|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491,GO:0050660,GO:0008033 LTnewLM_35 Pfam protein_match 484393 485250 . + . Parent=LTnewLM_350016900.1:pep;Name=PF02424;signature_desc=ApbE family LTnewLM_35 Pfam protein_match 485368 485493 . + . Parent=LTnewLM_350016900.1:pep;Name=PF01262;signature_desc=Alanine dehydrogenase/PNT%2C C-terminal domain LTnewLM_35 Pfam protein_match 485398 486024 . + . Parent=LTnewLM_350016900.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 485398 486027 . + . Parent=LTnewLM_350016900.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 485401 485490 . + . Parent=LTnewLM_350016900.1:pep;Name=PF01134;signature_desc=Glucose inhibited division protein A;Ontology_term=GO:0050660,GO:0008033 LTnewLM_35 Pfam protein_match 485401 485610 . + . Parent=LTnewLM_350016900.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_35 Pfam protein_match 485401 486807 . + . Parent=LTnewLM_350016900.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_35 Pfam protein_match 485407 485523 . + . Parent=LTnewLM_350016900.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_35 Pfam protein_match 486952 487191 . + . Parent=LTnewLM_350016900.1:pep;Name=PF00970;signature_desc=Oxidoreductase FAD-binding domain LTnewLM_35 Pfam protein_match 487264 487593 . + . Parent=LTnewLM_350016900.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_35 Liftoff gene 491902 493776 . + . ID=LTnewLM_350017000;coverage=0.998;sequence_ID=0.966;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.1190_0 LTnewLM_35 Liftoff mRNA 491902 493776 . + . ID=LTnewLM_350017000.1;Parent=LTnewLM_350017000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 491902 493776 . + 0 ID=LTnewLM_350017000.1:CDS:1;Parent=LTnewLM_350017000.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 491902 493776 . + . ID=LTnewLM_350017000.1:pep;Derives_from=LTnewLM_350017000.1;orthologous_to=LmjF.35.1190_mRNA;ortholog_cluster=OG0005767;product=term%3DPyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/FAD binding domain/NAD(P)-binding Rossmann-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF01266|Pfam:PF12831|Pfam:PF00890|Pfam:PF13450;Ontology_term=GO:0055114,GO:0016491 LTnewLM_35 Pfam protein_match 492316 492942 . + . Parent=LTnewLM_350017000.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 492316 492951 . + . Parent=LTnewLM_350017000.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_35 Pfam protein_match 492319 492438 . + . Parent=LTnewLM_350017000.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_35 Pfam protein_match 492319 493701 . + . Parent=LTnewLM_350017000.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_35 Pfam protein_match 492325 492453 . + . Parent=LTnewLM_350017000.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_35 AUGUSTUS gene 498433 500547 1 + . ID=LTnewLM_350017100 LTnewLM_35 AUGUSTUS mRNA 498433 500547 1 + . ID=LTnewLM_350017100.1;Parent=LTnewLM_350017100 LTnewLM_35 AUGUSTUS CDS 498433 500547 1 + 0 ID=LTnewLM_350017100.1:CDS:1;Parent=LTnewLM_350017100.1 ### LTnewLM_35 . polypeptide 498433 500547 . + . ID=LTnewLM_350017100.1:pep;Derives_from=LTnewLM_350017100.1;orthologous_to=LmjF.24.1100_mRNA,LmjF.35.1200_mRNA;ortholog_cluster=OG0000465;product=term%3DDEAD/DEAH box helicase/AAA domain/Helicase conserved C-terminal domain/Helicase associated domain (HA2)/Oligonucleotide/oligosaccharide-binding (OB)-fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF13401|Pfam:PF00271|Pfam:PF04408|Pfam:PF07717;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 498556 498987 . + . Parent=LTnewLM_350017100.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 498571 498888 . + . Parent=LTnewLM_350017100.1:pep;Name=PF13401;signature_desc=AAA domain LTnewLM_35 Pfam protein_match 499123 499515 . + . Parent=LTnewLM_350017100.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_35 Pfam protein_match 499705 499968 . + . Parent=LTnewLM_350017100.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_35 Pfam protein_match 500197 500424 . + . Parent=LTnewLM_350017100.1:pep;Name=PF07717;signature_desc=Oligonucleotide/oligosaccharide-binding (OB)-fold ### LTnewLM_35 AUGUSTUS gene 500982 501641 1 + . ID=LTnewLM_350017200 LTnewLM_35 AUGUSTUS mRNA 500982 501641 1 + . ID=LTnewLM_350017200.1;Parent=LTnewLM_350017200 LTnewLM_35 AUGUSTUS CDS 500982 501641 1 + 0 ID=LTnewLM_350017200.1:CDS:1;Parent=LTnewLM_350017200.1 ### LTnewLM_35 . polypeptide 500982 501641 . + . ID=LTnewLM_350017200.1:pep;Derives_from=LTnewLM_350017200.1;orthologous_to=LmjF.35.1210_mRNA;ortholog_cluster=OG0005768;product=term%3DARMET%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10208 LTnewLM_35 Pfam protein_match 501054 501152 . + . Parent=LTnewLM_350017200.1:pep;Name=PF10208;signature_desc=ARMET%2C C-terminal ### LTnewLM_35 AUGUSTUS gene 502222 502923 1 + . ID=LTnewLM_350017300 LTnewLM_35 AUGUSTUS mRNA 502222 502923 1 + . ID=LTnewLM_350017300.1;Parent=LTnewLM_350017300 LTnewLM_35 AUGUSTUS CDS 502222 502923 1 + 0 ID=LTnewLM_350017300.1:CDS:1;Parent=LTnewLM_350017300.1 ### LTnewLM_35 . polypeptide 502222 502923 . + . ID=LTnewLM_350017300.1:pep;Derives_from=LTnewLM_350017300.1;orthologous_to=LmjF.35.1220_mRNA;ortholog_cluster=OG0005769;product=term%3Dshort chain dehydrogenase/KR domain/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF08659|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_35 Pfam protein_match 502225 502806 . + . Parent=LTnewLM_350017300.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_35 Pfam protein_match 502231 502590 . + . Parent=LTnewLM_350017300.1:pep;Name=PF08659;signature_desc=KR domain LTnewLM_35 Pfam protein_match 502252 502806 . + . Parent=LTnewLM_350017300.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_35 . pseudogene 503479 504308 . + . ID=LTnewLM_350017400:pseudogene;coverage=1.0;sequence_ID=0.968;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1230_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 503479 504308 . + . ID=LTnewLM_350017400.1;Parent=LTnewLM_350017400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 503479 504308 . + . ID=LTnewLM_350017400.1:pseudogenic_exon:1;Parent=LTnewLM_350017400.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 503479 504308 . + . ID=LTnewLM_350017400.1:pep;Derives_from=LTnewLM_350017400.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 505056 505607 1 + . ID=LTnewLM_350017500 LTnewLM_35 AUGUSTUS mRNA 505056 505607 1 + . ID=LTnewLM_350017500.1;Parent=LTnewLM_350017500 LTnewLM_35 AUGUSTUS CDS 505056 505607 1 + 0 ID=LTnewLM_350017500.1:CDS:1;Parent=LTnewLM_350017500.1 ### LTnewLM_35 . polypeptide 505056 505607 . + . ID=LTnewLM_350017500.1:pep;Derives_from=LTnewLM_350017500.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 506555 509098 1 + . ID=LTnewLM_350017600 LTnewLM_35 AUGUSTUS mRNA 506555 509098 1 + . ID=LTnewLM_350017600.1;Parent=LTnewLM_350017600 LTnewLM_35 AUGUSTUS CDS 506555 509098 1 + 0 ID=LTnewLM_350017600.1:CDS:1;Parent=LTnewLM_350017600.1 ### LTnewLM_35 . polypeptide 506555 509098 . + . ID=LTnewLM_350017600.1:pep;Derives_from=LTnewLM_350017600.1;orthologous_to=LmjF.35.1240_mRNA;ortholog_cluster=OG0005770;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 509918 510604 1 + . ID=LTnewLM_350017700 LTnewLM_35 AUGUSTUS mRNA 509918 510604 1 + . ID=LTnewLM_350017700.1;Parent=LTnewLM_350017700 LTnewLM_35 AUGUSTUS CDS 509918 510604 1 + 0 ID=LTnewLM_350017700.1:CDS:1;Parent=LTnewLM_350017700.1 ### LTnewLM_35 . polypeptide 509918 510604 . + . ID=LTnewLM_350017700.1:pep;Derives_from=LTnewLM_350017700.1;orthologous_to=LmjF.35.1250_mRNA;ortholog_cluster=OG0005771;product=term%3DThioredoxin/Glutaredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF00462;Ontology_term=GO:0045454,GO:0015035,GO:0009055 LTnewLM_35 Pfam protein_match 509927 510160 . + . Parent=LTnewLM_350017700.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_35 Pfam protein_match 510344 510535 . + . Parent=LTnewLM_350017700.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 ### LTnewLM_35 AUGUSTUS gene 511821 512906 1 + . ID=LTnewLM_350017800 LTnewLM_35 AUGUSTUS mRNA 511821 512906 1 + . ID=LTnewLM_350017800.1;Parent=LTnewLM_350017800 LTnewLM_35 AUGUSTUS CDS 511821 512906 1 + 0 ID=LTnewLM_350017800.1:CDS:1;Parent=LTnewLM_350017800.1 ### LTnewLM_35 . polypeptide 511821 512906 . + . ID=LTnewLM_350017800.1:pep;Derives_from=LTnewLM_350017800.1;orthologous_to=LmjF.35.1260_mRNA;ortholog_cluster=OG0005772;product=term%3DHolliday junction DNA helicase RuvB P-loop domain/TIP49 P-loop domain/AAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05496|Pfam:PF06068|Pfam:PF07728|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0003678,GO:0005524,GO:0006310,GO:0006281,GO:0016887,GO:0009378 LTnewLM_35 Pfam protein_match 512220 512447 . + . Parent=LTnewLM_350017800.1:pep;Name=PF05496;signature_desc=Holliday junction DNA helicase RuvB P-loop domain;Ontology_term=GO:0009378,GO:0006281,GO:0006310 LTnewLM_35 Pfam protein_match 512223 512357 . + . Parent=LTnewLM_350017800.1:pep;Name=PF06068;signature_desc=TIP49 P-loop domain;Ontology_term=GO:0003678,GO:0005524 LTnewLM_35 Pfam protein_match 512229 512594 . + . Parent=LTnewLM_350017800.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_35 Pfam protein_match 512232 512618 . + . Parent=LTnewLM_350017800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_35 Pfam protein_match 512712 512801 . + . Parent=LTnewLM_350017800.1:pep;Name=PF17862;signature_desc=AAA+ lid domain ### LTnewLM_35 AUGUSTUS gene 514073 515149 1 + . ID=LTnewLM_350017900 LTnewLM_35 AUGUSTUS mRNA 514073 515149 1 + . ID=LTnewLM_350017900.1;Parent=LTnewLM_350017900 LTnewLM_35 AUGUSTUS CDS 514073 515149 1 + 0 ID=LTnewLM_350017900.1:CDS:1;Parent=LTnewLM_350017900.1 ### LTnewLM_35 . polypeptide 514073 515149 . + . ID=LTnewLM_350017900.1:pep;Derives_from=LTnewLM_350017900.1;orthologous_to=LmjF.35.1270_mRNA;ortholog_cluster=OG0005773;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 515800 516756 1 + . ID=LTnewLM_350018000 LTnewLM_35 AUGUSTUS mRNA 515800 516756 1 + . ID=LTnewLM_350018000.1;Parent=LTnewLM_350018000 LTnewLM_35 AUGUSTUS CDS 515800 516756 1 + 0 ID=LTnewLM_350018000.1:CDS:1;Parent=LTnewLM_350018000.1 ### LTnewLM_35 . polypeptide 515800 516756 . + . ID=LTnewLM_350018000.1:pep;Derives_from=LTnewLM_350018000.1;orthologous_to=LmjF.35.1280_mRNA;ortholog_cluster=OG0005774;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13532 LTnewLM_35 Pfam protein_match 516043 516366 . + . Parent=LTnewLM_350018000.1:pep;Name=PF13532;signature_desc=2OG-Fe(II) oxygenase superfamily ### LTnewLM_35 AUGUSTUS gene 517629 518378 1 + . ID=LTnewLM_350018100 LTnewLM_35 AUGUSTUS mRNA 517629 518378 1 + . ID=LTnewLM_350018100.1;Parent=LTnewLM_350018100 LTnewLM_35 AUGUSTUS CDS 517629 518378 1 + 0 ID=LTnewLM_350018100.1:CDS:1;Parent=LTnewLM_350018100.1 ### LTnewLM_35 . polypeptide 517629 518378 . + . ID=LTnewLM_350018100.1:pep;Derives_from=LTnewLM_350018100.1;orthologous_to=LmjF.35.1290_mRNA;ortholog_cluster=OG0005775;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 520829 521275 1 + . ID=LTnewLM_350018200 LTnewLM_35 AUGUSTUS mRNA 520829 521275 1 + . ID=LTnewLM_350018200.1;Parent=LTnewLM_350018200 LTnewLM_35 AUGUSTUS CDS 520829 521275 1 + 0 ID=LTnewLM_350018200.1:CDS:1;Parent=LTnewLM_350018200.1 ### LTnewLM_35 . polypeptide 520829 521275 . + . ID=LTnewLM_350018200.1:pep;Derives_from=LTnewLM_350018200.1;orthologous_to=LmjF.35.1300_mRNA;ortholog_cluster=OG0005776;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_35 Pfam protein_match 520841 521251 . + . Parent=LTnewLM_350018200.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_35 AUGUSTUS gene 523748 524050 1 + . ID=LTnewLM_350018300 LTnewLM_35 AUGUSTUS mRNA 523748 524050 1 + . ID=LTnewLM_350018300.1;Parent=LTnewLM_350018300 LTnewLM_35 AUGUSTUS CDS 523748 524050 1 + 0 ID=LTnewLM_350018300.1:CDS:1;Parent=LTnewLM_350018300.1 ### LTnewLM_35 . polypeptide 523748 524050 . + . ID=LTnewLM_350018300.1:pep;Derives_from=LTnewLM_350018300.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 525184 530253 1 + . ID=LTnewLM_350018400 LTnewLM_35 AUGUSTUS mRNA 525184 530253 1 + . ID=LTnewLM_350018400.1;Parent=LTnewLM_350018400 LTnewLM_35 AUGUSTUS CDS 525184 530253 1 + 0 ID=LTnewLM_350018400.1:CDS:1;Parent=LTnewLM_350018400.1 ### LTnewLM_35 . polypeptide 525184 530253 . + . ID=LTnewLM_350018400.1:pep;Derives_from=LTnewLM_350018400.1;orthologous_to=LmjF.35.1320_mRNA;ortholog_cluster=OG0005777;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 531238 532929 . + . ID=LTnewLM_350018500;coverage=1.0;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1330_0 LTnewLM_35 Liftoff mRNA 531238 532929 . + . ID=LTnewLM_350018500.1;Parent=LTnewLM_350018500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 531238 532929 . + 0 ID=LTnewLM_350018500.1:CDS:1;Parent=LTnewLM_350018500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 531238 532929 . + . ID=LTnewLM_350018500.1:pep;Derives_from=LTnewLM_350018500.1;orthologous_to=LmjF.35.1330_mRNA;ortholog_cluster=OG0005778;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_35 Pfam protein_match 531415 531735 . + . Parent=LTnewLM_350018500.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_35 AUGUSTUS gene 533922 534584 1 + . ID=LTnewLM_350018600 LTnewLM_35 AUGUSTUS mRNA 533922 534584 1 + . ID=LTnewLM_350018600.1;Parent=LTnewLM_350018600 LTnewLM_35 AUGUSTUS CDS 533922 534584 1 + 0 ID=LTnewLM_350018600.1:CDS:1;Parent=LTnewLM_350018600.1 ### LTnewLM_35 . polypeptide 533922 534584 . + . ID=LTnewLM_350018600.1:pep;Derives_from=LTnewLM_350018600.1;orthologous_to=LmjF.35.1350_mRNA;ortholog_cluster=OG0005779;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 535364 536353 1 + . ID=LTnewLM_350018700 LTnewLM_35 AUGUSTUS mRNA 535364 536353 1 + . ID=LTnewLM_350018700.1;Parent=LTnewLM_350018700 LTnewLM_35 AUGUSTUS CDS 535364 536353 1 + 0 ID=LTnewLM_350018700.1:CDS:1;Parent=LTnewLM_350018700.1 ### LTnewLM_35 . polypeptide 535364 536353 . + . ID=LTnewLM_350018700.1:pep;Derives_from=LTnewLM_350018700.1;orthologous_to=LmjF.35.1355_mRNA;ortholog_cluster=OG0005780;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 538155 539699 1 + . ID=LTnewLM_350018800 LTnewLM_35 AUGUSTUS mRNA 538155 539699 1 + . ID=LTnewLM_350018800.1;Parent=LTnewLM_350018800 LTnewLM_35 AUGUSTUS CDS 538155 539699 1 + 0 ID=LTnewLM_350018800.1:CDS:1;Parent=LTnewLM_350018800.1 ### LTnewLM_35 . polypeptide 538155 539699 . + . ID=LTnewLM_350018800.1:pep;Derives_from=LTnewLM_350018800.1;orthologous_to=LmjF.35.1360_mRNA;ortholog_cluster=OG0005781;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 542501 542863 1 + . ID=LTnewLM_350018900 LTnewLM_35 AUGUSTUS mRNA 542501 542863 1 + . ID=LTnewLM_350018900.1;Parent=LTnewLM_350018900 LTnewLM_35 AUGUSTUS CDS 542501 542863 1 + 0 ID=LTnewLM_350018900.1:CDS:1;Parent=LTnewLM_350018900.1 ### LTnewLM_35 . polypeptide 542501 542863 . + . ID=LTnewLM_350018900.1:pep;Derives_from=LTnewLM_350018900.1;orthologous_to=LmjF.35.1370_mRNA;ortholog_cluster=OG0005782;product=term%3DIron-binding zinc finger CDGSH type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09360;Ontology_term=GO:0043231,GO:0051537 LTnewLM_35 Pfam protein_match 542609 542680 . + . Parent=LTnewLM_350018900.1:pep;Name=PF09360;signature_desc=Iron-binding zinc finger CDGSH type;Ontology_term=GO:0051537,GO:0043231 LTnewLM_35 Pfam protein_match 542723 542803 . + . Parent=LTnewLM_350018900.1:pep;Name=PF09360;signature_desc=Iron-binding zinc finger CDGSH type;Ontology_term=GO:0051537,GO:0043231 ### LTnewLM_35 AUGUSTUS gene 543850 545322 1 + . ID=LTnewLM_350019000 LTnewLM_35 AUGUSTUS mRNA 543850 545322 1 + . ID=LTnewLM_350019000.1;Parent=LTnewLM_350019000 LTnewLM_35 AUGUSTUS CDS 543850 545322 1 + 0 ID=LTnewLM_350019000.1:CDS:1;Parent=LTnewLM_350019000.1 ### LTnewLM_35 . polypeptide 543850 545322 . + . ID=LTnewLM_350019000.1:pep;Derives_from=LTnewLM_350019000.1;orthologous_to=LmjF.35.1380_mRNA;ortholog_cluster=OG0005783;product=term%3DInsulinase (Peptidase family M16)/Peptidase M16 inactive domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00675|Pfam:PF05193 LTnewLM_35 Pfam protein_match 543979 544401 . + . Parent=LTnewLM_350019000.1:pep;Name=PF00675;signature_desc=Insulinase (Peptidase family M16) LTnewLM_35 Pfam protein_match 544444 545052 . + . Parent=LTnewLM_350019000.1:pep;Name=PF05193;signature_desc=Peptidase M16 inactive domain ### LTnewLM_35 AUGUSTUS gene 548624 550666 1 + . ID=LTnewLM_350019100 LTnewLM_35 AUGUSTUS mRNA 548624 550666 1 + . ID=LTnewLM_350019100.1;Parent=LTnewLM_350019100 LTnewLM_35 AUGUSTUS CDS 548624 550666 1 + 0 ID=LTnewLM_350019100.1:CDS:1;Parent=LTnewLM_350019100.1 ### LTnewLM_35 . polypeptide 548624 550666 . + . ID=LTnewLM_350019100.1:pep;Derives_from=LTnewLM_350019100.1;orthologous_to=LTnewLM_160020200.1,LmjF.35.1390_mRNA;ortholog_cluster=OG0000352;product=term%3DOTU-like cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02338 LTnewLM_35 Pfam protein_match 549836 550111 . + . Parent=LTnewLM_350019100.1:pep;Name=PF02338;signature_desc=OTU-like cysteine protease ### LTnewLM_35 AUGUSTUS gene 553247 553945 1 + . ID=LTnewLM_350019200 LTnewLM_35 AUGUSTUS mRNA 553247 553945 1 + . ID=LTnewLM_350019200.1;Parent=LTnewLM_350019200 LTnewLM_35 AUGUSTUS CDS 553247 553945 1 + 0 ID=LTnewLM_350019200.1:CDS:1;Parent=LTnewLM_350019200.1 ### LTnewLM_35 . polypeptide 553247 553945 . + . ID=LTnewLM_350019200.1:pep;Derives_from=LTnewLM_350019200.1;orthologous_to=LmjF.35.1400_mRNA;ortholog_cluster=OG0005784;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 555216 557582 1 + . ID=LTnewLM_350019300 LTnewLM_35 AUGUSTUS mRNA 555216 557582 1 + . ID=LTnewLM_350019300.1;Parent=LTnewLM_350019300 LTnewLM_35 AUGUSTUS CDS 555216 557582 1 + 0 ID=LTnewLM_350019300.1:CDS:1;Parent=LTnewLM_350019300.1 ### LTnewLM_35 . polypeptide 555216 557582 . + . ID=LTnewLM_350019300.1:pep;Derives_from=LTnewLM_350019300.1;orthologous_to=LmjF.35.1410_mRNA;ortholog_cluster=OG0005785;product=term%3DTGS domain/Threonyl and Alanyl tRNA synthetase second additional domain/tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)/Anticodon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02824|Pfam:PF07973|Pfam:PF00587|Pfam:PF03129;Ontology_term=GO:0000166,GO:0016876,GO:0005524,GO:0043039,GO:0004812,GO:0006418 LTnewLM_35 Pfam protein_match 555357 555533 . + . Parent=LTnewLM_350019300.1:pep;Name=PF02824;signature_desc=TGS domain LTnewLM_35 Pfam protein_match 555861 556004 . + . Parent=LTnewLM_350019300.1:pep;Name=PF07973;signature_desc=Threonyl and Alanyl tRNA synthetase second additional domain;Ontology_term=GO:0005524,GO:0016876,GO:0043039 LTnewLM_35 Pfam protein_match 556317 556991 . + . Parent=LTnewLM_350019300.1:pep;Name=PF00587;signature_desc=tRNA synthetase class II core domain (G%2C H%2C P%2C S and T);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 LTnewLM_35 Pfam protein_match 557283 557552 . + . Parent=LTnewLM_350019300.1:pep;Name=PF03129;signature_desc=Anticodon binding domain ### LTnewLM_35 AUGUSTUS gene 559243 561120 1 + . ID=LTnewLM_350019400 LTnewLM_35 AUGUSTUS mRNA 559243 561120 1 + . ID=LTnewLM_350019400.1;Parent=LTnewLM_350019400 LTnewLM_35 AUGUSTUS CDS 559243 561120 1 + 0 ID=LTnewLM_350019400.1:CDS:1;Parent=LTnewLM_350019400.1 ### LTnewLM_35 . polypeptide 559243 561120 . + . ID=LTnewLM_350019400.1:pep;Derives_from=LTnewLM_350019400.1;orthologous_to=LmjF.35.1420_mRNA;ortholog_cluster=OG0005786;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF13428|Pfam:PF13181|Pfam:PF07719|Pfam:PF14559|Pfam:PF13431;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 560596 560754 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560692 560850 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560755 560877 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13428;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560758 560847 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 560764 560850 . + . Parent=LTnewLM_350019400.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560785 560931 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560797 560946 . + . Parent=LTnewLM_350019400.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 560821 560913 . + . Parent=LTnewLM_350019400.1:pep;Name=PF13431;signature_desc=Tetratricopeptide repeat ### LTnewLM_35 AUGUSTUS gene 564251 565033 1 + . ID=LTnewLM_350019500 LTnewLM_35 AUGUSTUS mRNA 564251 565033 1 + . ID=LTnewLM_350019500.1;Parent=LTnewLM_350019500 LTnewLM_35 AUGUSTUS CDS 564251 565033 1 + 0 ID=LTnewLM_350019500.1:CDS:1;Parent=LTnewLM_350019500.1 ### LTnewLM_35 . polypeptide 564251 565033 . + . ID=LTnewLM_350019500.1:pep;Derives_from=LTnewLM_350019500.1;orthologous_to=LTnewLM_320046600.1,LTnewLM_350019600.1,LmjF.32.3900_mRNA,LmjF.35.1430_mRNA,LmjF.35.1440_mRNA;ortholog_cluster=OG0000066;product=term%3DRibosomal Proteins L2%2C RNA binding domain/Ribosomal Proteins L2%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00181|Pfam:PF03947;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 564284 564514 . + . Parent=LTnewLM_350019500.1:pep;Name=PF00181;signature_desc=Ribosomal Proteins L2%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_35 Pfam protein_match 564542 564928 . + . Parent=LTnewLM_350019500.1:pep;Name=PF03947;signature_desc=Ribosomal Proteins L2%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 566640 567422 1 + . ID=LTnewLM_350019600 LTnewLM_35 AUGUSTUS mRNA 566640 567422 1 + . ID=LTnewLM_350019600.1;Parent=LTnewLM_350019600 LTnewLM_35 AUGUSTUS CDS 566640 567422 1 + 0 ID=LTnewLM_350019600.1:CDS:1;Parent=LTnewLM_350019600.1 ### LTnewLM_35 . polypeptide 566640 567422 . + . ID=LTnewLM_350019600.1:pep;Derives_from=LTnewLM_350019600.1;orthologous_to=LTnewLM_320046600.1,LTnewLM_350019500.1,LmjF.32.3900_mRNA,LmjF.35.1430_mRNA,LmjF.35.1440_mRNA;ortholog_cluster=OG0000066;product=term%3DRibosomal Proteins L2%2C RNA binding domain/Ribosomal Proteins L2%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00181|Pfam:PF03947;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 566673 566903 . + . Parent=LTnewLM_350019600.1:pep;Name=PF00181;signature_desc=Ribosomal Proteins L2%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_35 Pfam protein_match 566931 567317 . + . Parent=LTnewLM_350019600.1:pep;Name=PF03947;signature_desc=Ribosomal Proteins L2%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 . pseudogene 570593 580007 . + . ID=LTnewLM_350019700:pseudogene;coverage=0.956;sequence_ID=0.902;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1450_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 570593 580007 . + . ID=LTnewLM_350019700.1;Parent=LTnewLM_350019700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 570593 580007 . + . ID=LTnewLM_350019700.1:pseudogenic_exon:1;Parent=LTnewLM_350019700.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 570593 580007 . + . ID=LTnewLM_350019700.1:pep;Derives_from=LTnewLM_350019700.1;orthologous_to=LmjF.35.1450_mRNA;ortholog_cluster=OG0007658;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 580896 581885 1 + . ID=LTnewLM_350019800 LTnewLM_35 AUGUSTUS mRNA 580896 581885 1 + . ID=LTnewLM_350019800.1;Parent=LTnewLM_350019800 LTnewLM_35 AUGUSTUS CDS 580896 581885 1 + 0 ID=LTnewLM_350019800.1:CDS:1;Parent=LTnewLM_350019800.1 ### LTnewLM_35 . polypeptide 580896 581885 . + . ID=LTnewLM_350019800.1:pep;Derives_from=LTnewLM_350019800.1;orthologous_to=LmjF.35.1460_mRNA;ortholog_cluster=OG0005787;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 586104 588110 1 + . ID=LTnewLM_350019900 LTnewLM_35 AUGUSTUS mRNA 586104 588110 1 + . ID=LTnewLM_350019900.1;Parent=LTnewLM_350019900 LTnewLM_35 AUGUSTUS CDS 586104 588110 1 + 0 ID=LTnewLM_350019900.1:CDS:1;Parent=LTnewLM_350019900.1 ### LTnewLM_35 . polypeptide 586104 588110 . + . ID=LTnewLM_350019900.1:pep;Derives_from=LTnewLM_350019900.1;orthologous_to=LmjF.35.1470_mRNA;ortholog_cluster=OG0005788;product=term%3DPhosphotransferase enzyme family/Choline/ethanolamine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01636|Pfam:PF01633 LTnewLM_35 Pfam protein_match 586644 587342 . + . Parent=LTnewLM_350019900.1:pep;Name=PF01636;signature_desc=Phosphotransferase enzyme family LTnewLM_35 Pfam protein_match 586710 587597 . + . Parent=LTnewLM_350019900.1:pep;Name=PF01633;signature_desc=Choline/ethanolamine kinase ### LTnewLM_35 AUGUSTUS gene 594141 595130 1 - . ID=LTnewLM_350020000 LTnewLM_35 AUGUSTUS mRNA 594141 595130 1 - . ID=LTnewLM_350020000.1;Parent=LTnewLM_350020000 LTnewLM_35 AUGUSTUS CDS 594141 595130 1 - 0 ID=LTnewLM_350020000.1:CDS:1;Parent=LTnewLM_350020000.1 ### LTnewLM_35 . polypeptide 594141 595130 . - . ID=LTnewLM_350020000.1:pep;Derives_from=LTnewLM_350020000.1;orthologous_to=LmjF.35.1480_mRNA;ortholog_cluster=OG0005789;product=term%3DArginase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00491;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 594189 595091 . - . Parent=LTnewLM_350020000.1:pep;Name=PF00491;signature_desc=Arginase family;Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 597074 597418 1 - . ID=LTnewLM_350020100 LTnewLM_35 AUGUSTUS mRNA 597074 597418 1 - . ID=LTnewLM_350020100.1;Parent=LTnewLM_350020100 LTnewLM_35 AUGUSTUS CDS 597074 597418 1 - 0 ID=LTnewLM_350020100.1:CDS:1;Parent=LTnewLM_350020100.1 ### LTnewLM_35 . polypeptide 597074 597418 . - . ID=LTnewLM_350020100.1:pep;Derives_from=LTnewLM_350020100.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 598879 599769 1 - . ID=LTnewLM_350020200 LTnewLM_35 AUGUSTUS mRNA 598879 599769 1 - . ID=LTnewLM_350020200.1;Parent=LTnewLM_350020200 LTnewLM_35 AUGUSTUS CDS 598879 599769 1 - 0 ID=LTnewLM_350020200.1:CDS:1;Parent=LTnewLM_350020200.1 ### LTnewLM_35 . polypeptide 598879 599769 . - . ID=LTnewLM_350020200.1:pep;Derives_from=LTnewLM_350020200.1;orthologous_to=LmjF.35.1490_mRNA;ortholog_cluster=OG0005790;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 603141 604889 . - . ID=LTnewLM_350020300.1:pep;Derives_from=LTnewLM_350020300.1;orthologous_to=LTnewLM_350020300.2,LmjF.35.1510.1_mRNA,LmjF.35.1510.2_mRNA;ortholog_cluster=OG0000247;product=term%3DNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031|Pfam:PF00642;Ontology_term=GO:0046872,GO:0005515 LTnewLM_35 Pfam protein_match 603960 604031 . - . Parent=LTnewLM_350020300.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 604278 604718 . - . Parent=LTnewLM_350020300.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_35 . polypeptide 603141 604940 . - . ID=LTnewLM_350020300.2:pep;Derives_from=LTnewLM_350020300.2;orthologous_to=LTnewLM_350020300.1,LmjF.35.1510.1_mRNA,LmjF.35.1510.2_mRNA;ortholog_cluster=OG0000247;product=term%3DNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031|Pfam:PF00642;Ontology_term=GO:0046872,GO:0005515 LTnewLM_35 Pfam protein_match 603960 604031 . - . Parent=LTnewLM_350020300.2:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 604278 604718 . - . Parent=LTnewLM_350020300.2:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_35 Liftoff gene 603141 604972 . - . ID=LTnewLM_350020300;coverage=0.998;sequence_ID=0.954;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.35.1510_0 LTnewLM_35 Liftoff mRNA 603141 604942 . - . ID=LTnewLM_350020300.1;Parent=LTnewLM_350020300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 603141 604889 . - 0 ID=LTnewLM_350020300.1:CDS:1;Parent=LTnewLM_350020300.1;extra_copy_number=0 LTnewLM_35 Liftoff five_prime_UTR 604890 604942 . - . ID=LTnewLM_350020300:five_prime_UTR;Parent=LTnewLM_350020300.1;extra_copy_number=0 LTnewLM_35 Liftoff mRNA 603141 604972 . - . ID=LTnewLM_350020300.2;Parent=LTnewLM_350020300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 603141 604940 . - 0 ID=LTnewLM_350020300.2:CDS:1;Parent=LTnewLM_350020300.2;extra_copy_number=0 LTnewLM_35 Liftoff five_prime_UTR 604941 604972 . - . ID=LTnewLM_350020300:five_prime_UTR.1;Parent=LTnewLM_350020300.2;extra_copy_number=0 ### LTnewLM_35 Liftoff gene 605567 606012 . - . ID=LTnewLM_350020400;coverage=1.0;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1515_0 LTnewLM_35 Liftoff mRNA 605567 606012 . - . ID=LTnewLM_350020400.1;Parent=LTnewLM_350020400;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 605567 606012 . - 0 ID=LTnewLM_350020400.1:CDS:1;Parent=LTnewLM_350020400.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 605567 606012 . - . ID=LTnewLM_350020400.1:pep;Derives_from=LTnewLM_350020400.1;orthologous_to=LmjF.35.1515.1;ortholog_cluster=OG0005791;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 607403 609589 1 - . ID=LTnewLM_350020500 LTnewLM_35 AUGUSTUS mRNA 607403 609589 1 - . ID=LTnewLM_350020500.1;Parent=LTnewLM_350020500 LTnewLM_35 AUGUSTUS CDS 607403 609589 1 - 0 ID=LTnewLM_350020500.1:CDS:1;Parent=LTnewLM_350020500.1 ### LTnewLM_35 . polypeptide 607403 609589 . - . ID=LTnewLM_350020500.1:pep;Derives_from=LTnewLM_350020500.1;orthologous_to=LmjF.35.1520_mRNA;ortholog_cluster=OG0005792;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 610337 611848 . - . ID=LTnewLM_350020600.1:pep;Derives_from=LTnewLM_350020600.1;orthologous_to=LmjF.35.1530.1_mRNA,LmjF.35.1530.2_mRNA;ortholog_cluster=OG0000546;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 610337 611952 . - . ID=LTnewLM_350020600.2:pep;Derives_from=LTnewLM_350020600.2;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 610337 612588 . - . ID=LTnewLM_350020600:pseudogene;coverage=0.984;sequence_ID=0.892;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1530_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 610337 611869 . - . ID=LTnewLM_350020600.1;Parent=LTnewLM_350020600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 610337 611848 . - . ID=LTnewLM_350020600.1:pseudogenic_exon:1;Parent=LTnewLM_350020600.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 610337 612588 . - . ID=LTnewLM_350020600.2;Parent=LTnewLM_350020600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 610337 611952 . - . ID=LTnewLM_350020600.2:pseudogenic_exon:1;Parent=LTnewLM_350020600.2;extra_copy_number=0 ### LTnewLM_35 AUGUSTUS gene 614016 614909 1 - . ID=LTnewLM_350020700 LTnewLM_35 AUGUSTUS mRNA 614016 614909 1 - . ID=LTnewLM_350020700.1;Parent=LTnewLM_350020700 LTnewLM_35 AUGUSTUS CDS 614016 614909 1 - 0 ID=LTnewLM_350020700.1:CDS:1;Parent=LTnewLM_350020700.1 ### LTnewLM_35 . polypeptide 614016 614909 . - . ID=LTnewLM_350020700.1:pep;Derives_from=LTnewLM_350020700.1;orthologous_to=LmjF.35.1540_mRNA;ortholog_cluster=OG0005793;product=term%3DRieske [2Fe-2S] domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00355;Ontology_term=GO:0055114,GO:0016491,GO:0051537 LTnewLM_35 Pfam protein_match 614067 614381 . - . Parent=LTnewLM_350020700.1:pep;Name=PF00355;signature_desc=Rieske [2Fe-2S] domain;Ontology_term=GO:0016491,GO:0051537,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 615766 617943 1 - . ID=LTnewLM_350020800 LTnewLM_35 AUGUSTUS mRNA 615766 617943 1 - . ID=LTnewLM_350020800.1;Parent=LTnewLM_350020800 LTnewLM_35 AUGUSTUS CDS 615766 617943 1 - 0 ID=LTnewLM_350020800.1:CDS:1;Parent=LTnewLM_350020800.1 ### LTnewLM_35 . polypeptide 615766 617943 . - . ID=LTnewLM_350020800.1:pep;Derives_from=LTnewLM_350020800.1;orthologous_to=LmjF.35.1550_mRNA;ortholog_cluster=OG0005794;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 618513 624296 . - . ID=LTnewLM_350020900;coverage=0.998;sequence_ID=0.932;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.1560_0 LTnewLM_35 Liftoff mRNA 618513 624296 . - . ID=LTnewLM_350020900.1;Parent=LTnewLM_350020900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 618513 624296 . - 0 ID=LTnewLM_350020900.1:CDS:1;Parent=LTnewLM_350020900.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 618513 624296 . - . ID=LTnewLM_350020900.1:pep;Derives_from=LTnewLM_350020900.1;orthologous_to=LmjF.35.1560_mRNA;ortholog_cluster=OG0005795;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 626128 627360 1 - . ID=LTnewLM_350021000 LTnewLM_35 AUGUSTUS mRNA 626128 627360 1 - . ID=LTnewLM_350021000.1;Parent=LTnewLM_350021000 LTnewLM_35 AUGUSTUS CDS 626128 627360 1 - 0 ID=LTnewLM_350021000.1:CDS:1;Parent=LTnewLM_350021000.1 ### LTnewLM_35 . polypeptide 626128 627360 . - . ID=LTnewLM_350021000.1:pep;Derives_from=LTnewLM_350021000.1;orthologous_to=LmjF.35.1570_mRNA;ortholog_cluster=OG0005796;product=term%3DMethyltransferase domain/ubiE/COQ5 methyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489|Pfam:PF13847|Pfam:PF13649|Pfam:PF01209|Pfam:PF08242|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_35 Pfam protein_match 626257 626748 . - . Parent=LTnewLM_350021000.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 626359 626688 . - . Parent=LTnewLM_350021000.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_35 Pfam protein_match 626377 626691 . - . Parent=LTnewLM_350021000.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 626398 626685 . - . Parent=LTnewLM_350021000.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_35 Pfam protein_match 626401 626685 . - . Parent=LTnewLM_350021000.1:pep;Name=PF08242;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 626407 626688 . - . Parent=LTnewLM_350021000.1:pep;Name=PF13649;signature_desc=Methyltransferase domain ### LTnewLM_35 AUGUSTUS gene 628687 630009 1 - . ID=LTnewLM_350021100 LTnewLM_35 AUGUSTUS mRNA 628687 630009 1 - . ID=LTnewLM_350021100.1;Parent=LTnewLM_350021100 LTnewLM_35 AUGUSTUS CDS 628687 630009 1 - 0 ID=LTnewLM_350021100.1:CDS:1;Parent=LTnewLM_350021100.1 ### LTnewLM_35 . polypeptide 628687 630009 . - . ID=LTnewLM_350021100.1:pep;Derives_from=LTnewLM_350021100.1;orthologous_to=LmjF.35.1580_mRNA;ortholog_cluster=OG0005797;product=term%3DCaspase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00656;Ontology_term=GO:0004197,GO:0006508 LTnewLM_35 Pfam protein_match 629086 629823 . - . Parent=LTnewLM_350021100.1:pep;Name=PF00656;signature_desc=Caspase domain;Ontology_term=GO:0004197,GO:0006508 ### LTnewLM_35 . polypeptide 631216 632850 . - . ID=LTnewLM_350021200.1:pep;Derives_from=LTnewLM_350021200.1;orthologous_to=LTnewLM_350021200.2,LmjF.35.1590_mRNA;ortholog_cluster=OG0000466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 631216 632952 2 - . ID=LTnewLM_350021200 LTnewLM_35 AUGUSTUS mRNA 631216 632850 1 - . ID=LTnewLM_350021200.1;Parent=LTnewLM_350021200 LTnewLM_35 AUGUSTUS CDS 631216 632560 1 - 1 ID=LTnewLM_350021200.1:CDS:1;Parent=LTnewLM_350021200.1 LTnewLM_35 AUGUSTUS CDS 632624 632850 1 - 0 ID=LTnewLM_350021200.1:CDS:2;Parent=LTnewLM_350021200.1 LTnewLM_35 AUGUSTUS mRNA 631216 632952 1 - . ID=LTnewLM_350021200.2;Parent=LTnewLM_350021200 LTnewLM_35 AUGUSTUS CDS 631216 632560 1 - 1 ID=LTnewLM_350021200.2:CDS:1;Parent=LTnewLM_350021200.2 LTnewLM_35 AUGUSTUS CDS 632624 632952 1 - 0 ID=LTnewLM_350021200.2:CDS:2;Parent=LTnewLM_350021200.2 ### LTnewLM_35 . polypeptide 631216 632952 . - . ID=LTnewLM_350021200.2:pep;Derives_from=LTnewLM_350021200.2;orthologous_to=LTnewLM_350021200.1,LmjF.35.1590_mRNA;ortholog_cluster=OG0000466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 634656 636998 1 - . ID=LTnewLM_350021300 LTnewLM_35 AUGUSTUS mRNA 634656 636998 1 - . ID=LTnewLM_350021300.1;Parent=LTnewLM_350021300 LTnewLM_35 AUGUSTUS CDS 634656 636998 1 - 0 ID=LTnewLM_350021300.1:CDS:1;Parent=LTnewLM_350021300.1 ### LTnewLM_35 . polypeptide 634656 636998 . - . ID=LTnewLM_350021300.1:pep;Derives_from=LTnewLM_350021300.1;orthologous_to=LmjF.35.1600_mRNA;ortholog_cluster=OG0005798;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 637860 640688 1 - . ID=LTnewLM_350021400 LTnewLM_35 AUGUSTUS mRNA 637860 640688 1 - . ID=LTnewLM_350021400.1;Parent=LTnewLM_350021400 LTnewLM_35 AUGUSTUS CDS 637860 640688 1 - 0 ID=LTnewLM_350021400.1:CDS:1;Parent=LTnewLM_350021400.1 ### LTnewLM_35 . polypeptide 637860 640688 . - . ID=LTnewLM_350021400.1:pep;Derives_from=LTnewLM_350021400.1;orthologous_to=LmjF.35.1610_mRNA;ortholog_cluster=OG0005799;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 643184 649039 1 - . ID=LTnewLM_350021500 LTnewLM_35 AUGUSTUS mRNA 643184 649039 1 - . ID=LTnewLM_350021500.1;Parent=LTnewLM_350021500 LTnewLM_35 AUGUSTUS CDS 643184 649039 1 - 0 ID=LTnewLM_350021500.1:CDS:1;Parent=LTnewLM_350021500.1 ### LTnewLM_35 . polypeptide 643184 649039 . - . ID=LTnewLM_350021500.1:pep;Derives_from=LTnewLM_350021500.1;orthologous_to=LmjF.35.1620_mRNA;ortholog_cluster=OG0005800;product=term%3DConcanavalin A-like lectin/glucanases superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13385 LTnewLM_35 Pfam protein_match 646514 646909 . - . Parent=LTnewLM_350021500.1:pep;Name=PF13385;signature_desc=Concanavalin A-like lectin/glucanases superfamily ### LTnewLM_35 AUGUSTUS gene 651483 652919 1 - . ID=LTnewLM_350021600 LTnewLM_35 AUGUSTUS mRNA 651483 652919 1 - . ID=LTnewLM_350021600.1;Parent=LTnewLM_350021600 LTnewLM_35 AUGUSTUS CDS 651483 652919 1 - 0 ID=LTnewLM_350021600.1:CDS:1;Parent=LTnewLM_350021600.1 ### LTnewLM_35 . polypeptide 651483 652919 . - . ID=LTnewLM_350021600.1:pep;Derives_from=LTnewLM_350021600.1;orthologous_to=LmjF.35.1630_mRNA;ortholog_cluster=OG0005801;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 653968 655056 . - . ID=LTnewLM_350021700;coverage=1.0;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1640_0 LTnewLM_35 Liftoff mRNA 653968 655056 . - . ID=LTnewLM_350021700.1;Parent=LTnewLM_350021700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 653968 655056 . - 0 ID=LTnewLM_350021700.1:CDS:1;Parent=LTnewLM_350021700.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 653968 655056 . - . ID=LTnewLM_350021700.1:pep;Derives_from=LTnewLM_350021700.1;orthologous_to=LmjF.35.1640_mRNA;ortholog_cluster=OG0005802;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 656334 658513 . - . ID=LTnewLM_350021800:pseudogene;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1650_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 656334 658513 . - . ID=LTnewLM_350021800.1;Parent=LTnewLM_350021800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 656334 658513 . - . ID=LTnewLM_350021800.1:pseudogenic_exon:1;Parent=LTnewLM_350021800.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 656334 658513 . - . ID=LTnewLM_350021800.1:pep;Derives_from=LTnewLM_350021800.1;orthologous_to=LmjF.35.1650_mRNA;ortholog_cluster=OG0007659;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 659503 662025 1 - . ID=LTnewLM_350021900 LTnewLM_35 AUGUSTUS mRNA 659503 662025 1 - . ID=LTnewLM_350021900.1;Parent=LTnewLM_350021900 LTnewLM_35 AUGUSTUS CDS 659503 662025 1 - 0 ID=LTnewLM_350021900.1:CDS:1;Parent=LTnewLM_350021900.1 ### LTnewLM_35 . polypeptide 659503 662025 . - . ID=LTnewLM_350021900.1:pep;Derives_from=LTnewLM_350021900.1;orthologous_to=LmjF.35.1660_mRNA;ortholog_cluster=OG0005803;product=term%3DHistidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase/DNA mismatch repair protein%2C C-terminal domain/MutL C terminal dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13589|Pfam:PF01119|Pfam:PF08676;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_35 Pfam protein_match 659644 660072 . - . Parent=LTnewLM_350021900.1:pep;Name=PF08676;signature_desc=MutL C terminal dimerisation domain;Ontology_term=GO:0005524,GO:0006298 LTnewLM_35 Pfam protein_match 660898 661236 . - . Parent=LTnewLM_350021900.1:pep;Name=PF01119;signature_desc=DNA mismatch repair protein%2C C-terminal domain;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_35 Pfam protein_match 661822 661959 . - . Parent=LTnewLM_350021900.1:pep;Name=PF13589;signature_desc=Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase ### LTnewLM_35 AUGUSTUS gene 663167 663598 1 - . ID=LTnewLM_350022000 LTnewLM_35 AUGUSTUS mRNA 663167 663598 1 - . ID=LTnewLM_350022000.1;Parent=LTnewLM_350022000 LTnewLM_35 AUGUSTUS CDS 663167 663598 1 - 0 ID=LTnewLM_350022000.1:CDS:1;Parent=LTnewLM_350022000.1 ### LTnewLM_35 . polypeptide 663167 663598 . - . ID=LTnewLM_350022000.1:pep;Derives_from=LTnewLM_350022000.1;orthologous_to=LTnewLM_240027600.1,LmjF.24.2050_mRNA,LmjF.35.1670_mRNA;ortholog_cluster=OG0000175;product=term%3DRibosomal proteins L26 eukaryotic%2C L24P archaeal/KOW motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16906|Pfam:PF00467 LTnewLM_35 Pfam protein_match 663245 663577 . - . Parent=LTnewLM_350022000.1:pep;Name=PF16906;signature_desc=Ribosomal proteins L26 eukaryotic%2C L24P archaeal LTnewLM_35 Pfam protein_match 663365 663454 . - . Parent=LTnewLM_350022000.1:pep;Name=PF00467;signature_desc=KOW motif ### LTnewLM_35 AUGUSTUS gene 664523 665359 1 - . ID=LTnewLM_350022100 LTnewLM_35 AUGUSTUS mRNA 664523 665359 1 - . ID=LTnewLM_350022100.1;Parent=LTnewLM_350022100 LTnewLM_35 AUGUSTUS CDS 664523 665359 1 - 0 ID=LTnewLM_350022100.1:CDS:1;Parent=LTnewLM_350022100.1 ### LTnewLM_35 . polypeptide 664523 665359 . - . ID=LTnewLM_350022100.1:pep;Derives_from=LTnewLM_350022100.1;orthologous_to=LmjF.35.1680_mRNA;ortholog_cluster=OG0005804;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 666082 667323 1 - . ID=LTnewLM_350022200 LTnewLM_35 AUGUSTUS mRNA 666082 667323 1 - . ID=LTnewLM_350022200.1;Parent=LTnewLM_350022200 LTnewLM_35 AUGUSTUS CDS 666082 667323 1 - 0 ID=LTnewLM_350022200.1:CDS:1;Parent=LTnewLM_350022200.1 ### LTnewLM_35 . polypeptide 666082 667323 . - . ID=LTnewLM_350022200.1:pep;Derives_from=LTnewLM_350022200.1;orthologous_to=LmjF.35.1690_mRNA;ortholog_cluster=OG0005805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 668335 669423 1 - . ID=LTnewLM_350022300 LTnewLM_35 AUGUSTUS mRNA 668335 669423 1 - . ID=LTnewLM_350022300.1;Parent=LTnewLM_350022300 LTnewLM_35 AUGUSTUS CDS 668335 669423 1 - 0 ID=LTnewLM_350022300.1:CDS:1;Parent=LTnewLM_350022300.1 ### LTnewLM_35 . polypeptide 668335 669423 . - . ID=LTnewLM_350022300.1:pep;Derives_from=LTnewLM_350022300.1;orthologous_to=LmjF.35.1700_mRNA;ortholog_cluster=OG0005806;product=term%3DRNA 3'-terminal phosphate cyclase/RNA 3'-terminal phosphate cyclase (RTC)%2C insert domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01137|Pfam:PF05189 LTnewLM_35 Pfam protein_match 668443 669417 . - . Parent=LTnewLM_350022300.1:pep;Name=PF01137;signature_desc=RNA 3'-terminal phosphate cyclase LTnewLM_35 Pfam protein_match 668599 668901 . - . Parent=LTnewLM_350022300.1:pep;Name=PF05189;signature_desc=RNA 3'-terminal phosphate cyclase (RTC)%2C insert domain ### LTnewLM_35 AUGUSTUS gene 671715 673049 1 - . ID=LTnewLM_350022400 LTnewLM_35 AUGUSTUS mRNA 671715 673049 1 - . ID=LTnewLM_350022400.1;Parent=LTnewLM_350022400 LTnewLM_35 AUGUSTUS CDS 671715 673049 1 - 0 ID=LTnewLM_350022400.1:CDS:1;Parent=LTnewLM_350022400.1 ### LTnewLM_35 . polypeptide 671715 673049 . - . ID=LTnewLM_350022400.1:pep;Derives_from=LTnewLM_350022400.1;orthologous_to=LmjF.35.1720_mRNA;ortholog_cluster=OG0005807;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_35 Pfam protein_match 671928 672365 . - . Parent=LTnewLM_350022400.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_35 AUGUSTUS gene 674785 675903 1 - . ID=LTnewLM_350022500 LTnewLM_35 AUGUSTUS mRNA 674785 675903 1 - . ID=LTnewLM_350022500.1;Parent=LTnewLM_350022500 LTnewLM_35 AUGUSTUS CDS 674785 675903 1 - 0 ID=LTnewLM_350022500.1:CDS:1;Parent=LTnewLM_350022500.1 ### LTnewLM_35 . polypeptide 674785 675903 . - . ID=LTnewLM_350022500.1:pep;Derives_from=LTnewLM_350022500.1;orthologous_to=LmjF.35.1730_mRNA;ortholog_cluster=OG0005808;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 674917 675771 . - . Parent=LTnewLM_350022500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 675205 675765 . - . Parent=LTnewLM_350022500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 678163 681657 1 - . ID=LTnewLM_350022600 LTnewLM_35 AUGUSTUS mRNA 678163 681657 1 - . ID=LTnewLM_350022600.1;Parent=LTnewLM_350022600 LTnewLM_35 AUGUSTUS CDS 678163 681657 1 - 0 ID=LTnewLM_350022600.1:CDS:1;Parent=LTnewLM_350022600.1 ### LTnewLM_35 . polypeptide 678163 681657 . - . ID=LTnewLM_350022600.1:pep;Derives_from=LTnewLM_350022600.1;orthologous_to=LmjF.35.1740_mRNA;ortholog_cluster=OG0005809;product=term%3DUbiquitin carboxyl-terminal hydrolase/ICP0-binding domain of Ubiquitin-specific protease 7/Ubiquitin-specific protease C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13423|Pfam:PF00443|Pfam:PF12436|Pfam:PF14533;Ontology_term=GO:0006511,GO:0036459 LTnewLM_35 Pfam protein_match 678220 678996 . - . Parent=LTnewLM_350022600.1:pep;Name=PF14533;signature_desc=Ubiquitin-specific protease C-terminal LTnewLM_35 Pfam protein_match 679042 679401 . - . Parent=LTnewLM_350022600.1:pep;Name=PF12436;signature_desc=ICP0-binding domain of Ubiquitin-specific protease 7 LTnewLM_35 Pfam protein_match 680254 681222 . - . Parent=LTnewLM_350022600.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_35 Pfam protein_match 680368 681222 . - . Parent=LTnewLM_350022600.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_35 AUGUSTUS gene 682198 682491 0.97 - . ID=LTnewLM_350022700 LTnewLM_35 AUGUSTUS mRNA 682198 682491 0.97 - . ID=LTnewLM_350022700.1;Parent=LTnewLM_350022700 LTnewLM_35 AUGUSTUS CDS 682198 682491 0.97 - 0 ID=LTnewLM_350022700.1:CDS:1;Parent=LTnewLM_350022700.1 ### LTnewLM_35 . polypeptide 682198 682491 . - . ID=LTnewLM_350022700.1:pep;Derives_from=LTnewLM_350022700.1;orthologous_to=LmjF.35.1750_mRNA;ortholog_cluster=OG0005810;product=term%3DRagulator complex protein LAMTOR5/Roadblock/LC7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16672|Pfam:PF03259 LTnewLM_35 Pfam protein_match 682216 682479 . - . Parent=LTnewLM_350022700.1:pep;Name=PF03259;signature_desc=Roadblock/LC7 domain LTnewLM_35 Pfam protein_match 682222 682485 . - . Parent=LTnewLM_350022700.1:pep;Name=PF16672;signature_desc=Ragulator complex protein LAMTOR5 ### LTnewLM_35 AUGUSTUS gene 685578 686000 1 + . ID=LTnewLM_350022800 LTnewLM_35 AUGUSTUS mRNA 685578 686000 1 + . ID=LTnewLM_350022800.1;Parent=LTnewLM_350022800 LTnewLM_35 AUGUSTUS CDS 685578 686000 1 + 0 ID=LTnewLM_350022800.1:CDS:1;Parent=LTnewLM_350022800.1 ### LTnewLM_35 . polypeptide 685578 686000 . + . ID=LTnewLM_350022800.1:pep;Derives_from=LTnewLM_350022800.1;orthologous_to=LmjF.35.1755_mRNA;ortholog_cluster=OG0005811;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 686714 687454 1 + . ID=LTnewLM_350022900 LTnewLM_35 AUGUSTUS mRNA 686714 687454 1 + . ID=LTnewLM_350022900.1;Parent=LTnewLM_350022900 LTnewLM_35 AUGUSTUS CDS 686714 687454 1 + 0 ID=LTnewLM_350022900.1:CDS:1;Parent=LTnewLM_350022900.1 ### LTnewLM_35 . polypeptide 686714 687454 . + . ID=LTnewLM_350022900.1:pep;Derives_from=LTnewLM_350022900.1;orthologous_to=LmjF.35.1760_mRNA;ortholog_cluster=OG0005812;product=term%3DProteasome complex subunit Rpn13 ubiquitin receptor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04683;Ontology_term=GO:0005737,GO:0005634 LTnewLM_35 Pfam protein_match 686765 687007 . + . Parent=LTnewLM_350022900.1:pep;Name=PF04683;signature_desc=Proteasome complex subunit Rpn13 ubiquitin receptor;Ontology_term=GO:0005634,GO:0005737 ### LTnewLM_35 AUGUSTUS gene 687918 688553 1 + . ID=LTnewLM_350023000 LTnewLM_35 AUGUSTUS mRNA 687918 688553 1 + . ID=LTnewLM_350023000.1;Parent=LTnewLM_350023000 LTnewLM_35 AUGUSTUS CDS 687918 688553 1 + 0 ID=LTnewLM_350023000.1:CDS:1;Parent=LTnewLM_350023000.1 ### LTnewLM_35 . polypeptide 687918 688553 . + . ID=LTnewLM_350023000.1:pep;Derives_from=LTnewLM_350023000.1;orthologous_to=LmjF.35.1770_mRNA;ortholog_cluster=OG0005813;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 688989 690647 1 + . ID=LTnewLM_350023100 LTnewLM_35 AUGUSTUS mRNA 688989 690647 1 + . ID=LTnewLM_350023100.1;Parent=LTnewLM_350023100 LTnewLM_35 AUGUSTUS CDS 688989 690647 1 + 0 ID=LTnewLM_350023100.1:CDS:1;Parent=LTnewLM_350023100.1 ### LTnewLM_35 . polypeptide 688989 690647 . + . ID=LTnewLM_350023100.1:pep;Derives_from=LTnewLM_350023100.1;orthologous_to=LmjF.35.1790_mRNA;ortholog_cluster=OG0005814;product=term%3DDNA polymerase alpha/epsilon subunit B%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04042;Ontology_term=GO:0003887,GO:0006260,GO:0003677 LTnewLM_35 Pfam protein_match 689817 690527 . + . Parent=LTnewLM_350023100.1:pep;Name=PF04042;signature_desc=DNA polymerase alpha/epsilon subunit B;Ontology_term=GO:0003677,GO:0003887,GO:0006260 ### LTnewLM_35 AUGUSTUS gene 692099 693094 1 + . ID=LTnewLM_350023200 LTnewLM_35 AUGUSTUS mRNA 692099 693094 1 + . ID=LTnewLM_350023200.1;Parent=LTnewLM_350023200 LTnewLM_35 AUGUSTUS CDS 692099 693094 1 + 0 ID=LTnewLM_350023200.1:CDS:1;Parent=LTnewLM_350023200.1 ### LTnewLM_35 . polypeptide 692099 693094 . + . ID=LTnewLM_350023200.1:pep;Derives_from=LTnewLM_350023200.1;orthologous_to=LmjF.35.1800_mRNA;ortholog_cluster=OG0005815;product=term%3DDTW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03942 LTnewLM_35 Pfam protein_match 692255 692707 . + . Parent=LTnewLM_350023200.1:pep;Name=PF03942;signature_desc=DTW domain ### LTnewLM_35 AUGUSTUS gene 694119 695564 1 + . ID=LTnewLM_350023300 LTnewLM_35 AUGUSTUS mRNA 694119 695564 1 + . ID=LTnewLM_350023300.1;Parent=LTnewLM_350023300 LTnewLM_35 AUGUSTUS CDS 694119 695564 1 + 0 ID=LTnewLM_350023300.1:CDS:1;Parent=LTnewLM_350023300.1 ### LTnewLM_35 . polypeptide 694119 695564 . + . ID=LTnewLM_350023300.1:pep;Derives_from=LTnewLM_350023300.1;orthologous_to=LmjF.35.1810_mRNA;ortholog_cluster=OG0005816;product=term%3DGrowth-arrest specific micro-tubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13851;Ontology_term=GO:0048870,GO:0031514 LTnewLM_35 Pfam protein_match 694827 695423 . + . Parent=LTnewLM_350023300.1:pep;Name=PF13851;signature_desc=Growth-arrest specific micro-tubule binding;Ontology_term=GO:0048870,GO:0031514 ### LTnewLM_35 AUGUSTUS gene 696957 697781 1 + . ID=LTnewLM_350023400 LTnewLM_35 AUGUSTUS mRNA 696957 697781 1 + . ID=LTnewLM_350023400.1;Parent=LTnewLM_350023400 LTnewLM_35 AUGUSTUS CDS 696957 697781 1 + 0 ID=LTnewLM_350023400.1:CDS:1;Parent=LTnewLM_350023400.1 ### LTnewLM_35 . polypeptide 696957 697781 . + . ID=LTnewLM_350023400.1:pep;Derives_from=LTnewLM_350023400.1;orthologous_to=LmjF.35.1820_mRNA;ortholog_cluster=OG0005817;product=term%3DEukaryotic rRNA processing protein EBP2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05890 LTnewLM_35 Pfam protein_match 697200 697763 . + . Parent=LTnewLM_350023400.1:pep;Name=PF05890;signature_desc=Eukaryotic rRNA processing protein EBP2 ### LTnewLM_35 AUGUSTUS gene 699615 701834 1 + . ID=LTnewLM_350023500 LTnewLM_35 AUGUSTUS mRNA 699615 701834 1 + . ID=LTnewLM_350023500.1;Parent=LTnewLM_350023500 LTnewLM_35 AUGUSTUS CDS 699615 701834 1 + 0 ID=LTnewLM_350023500.1:CDS:1;Parent=LTnewLM_350023500.1 ### LTnewLM_35 . polypeptide 699615 701834 . + . ID=LTnewLM_350023500.1:pep;Derives_from=LTnewLM_350023500.1;orthologous_to=LmjF.35.1830_mRNA;ortholog_cluster=OG0005818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 703140 703604 . + . ID=LTnewLM_350023600;coverage=1.0;sequence_ID=0.939;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1840_0 LTnewLM_35 Liftoff mRNA 703140 703604 . + . ID=LTnewLM_350023600.1;Parent=LTnewLM_350023600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 703140 703604 . + 0 ID=LTnewLM_350023600.1:CDS:1;Parent=LTnewLM_350023600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 703140 703604 . + . ID=LTnewLM_350023600.1:pep;Derives_from=LTnewLM_350023600.1;orthologous_to=LmjF.35.1840_mRNA;ortholog_cluster=OG0005819;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 704893 705537 1 + . ID=LTnewLM_350023700 LTnewLM_35 AUGUSTUS mRNA 704893 705537 1 + . ID=LTnewLM_350023700.1;Parent=LTnewLM_350023700 LTnewLM_35 AUGUSTUS CDS 704893 705537 1 + 0 ID=LTnewLM_350023700.1:CDS:1;Parent=LTnewLM_350023700.1 ### LTnewLM_35 . polypeptide 704893 705537 . + . ID=LTnewLM_350023700.1:pep;Derives_from=LTnewLM_350023700.1;orthologous_to=LmjF.35.1850_mRNA;ortholog_cluster=OG0005820;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_35 Pfam protein_match 704977 705513 . + . Parent=LTnewLM_350023700.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 708949 711084 1 + . ID=LTnewLM_350023800 LTnewLM_35 AUGUSTUS mRNA 708949 711084 1 + . ID=LTnewLM_350023800.1;Parent=LTnewLM_350023800 LTnewLM_35 AUGUSTUS CDS 708949 711084 1 + 0 ID=LTnewLM_350023800.1:CDS:1;Parent=LTnewLM_350023800.1 ### LTnewLM_35 . polypeptide 708949 711084 . + . ID=LTnewLM_350023800.1:pep;Derives_from=LTnewLM_350023800.1;orthologous_to=LmjF.35.1860_mRNA;ortholog_cluster=OG0005821;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 710083 711009 . + . Parent=LTnewLM_350023800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 710089 710742 . + . Parent=LTnewLM_350023800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 717629 719848 1 + . ID=LTnewLM_350023900 LTnewLM_35 AUGUSTUS mRNA 717629 719848 1 + . ID=LTnewLM_350023900.1;Parent=LTnewLM_350023900 LTnewLM_35 AUGUSTUS CDS 717629 719848 1 + 0 ID=LTnewLM_350023900.1:CDS:1;Parent=LTnewLM_350023900.1 ### LTnewLM_35 . polypeptide 717629 719848 . + . ID=LTnewLM_350023900.1:pep;Derives_from=LTnewLM_350023900.1;orthologous_to=LmjF.35.1870_mRNA;ortholog_cluster=OG0005822;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 721718 722635 1 + . ID=LTnewLM_350024000 LTnewLM_35 AUGUSTUS mRNA 721718 722635 1 + . ID=LTnewLM_350024000.1;Parent=LTnewLM_350024000 LTnewLM_35 AUGUSTUS CDS 721718 722635 1 + 0 ID=LTnewLM_350024000.1:CDS:1;Parent=LTnewLM_350024000.1 ### LTnewLM_35 . polypeptide 721718 722635 . + . ID=LTnewLM_350024000.1:pep;Derives_from=LTnewLM_350024000.1;orthologous_to=LTnewLM_350024100.1,LTnewLM_350024200.1,LmjF.35.1880_mRNA,LmjF.35.1890_mRNA,LmjF.35.1900_mRNA;ortholog_cluster=OG0000071;product=term%3DRibosomal large subunit proteins 60S L5%2C and 50S L18/Ribosomal L18 C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17144|Pfam:PF14204 LTnewLM_35 Pfam protein_match 721757 722257 . + . Parent=LTnewLM_350024000.1:pep;Name=PF17144;signature_desc=Ribosomal large subunit proteins 60S L5%2C and 50S L18 LTnewLM_35 Pfam protein_match 722450 722614 . + . Parent=LTnewLM_350024000.1:pep;Name=PF14204;signature_desc=Ribosomal L18 C-terminal region ### LTnewLM_35 AUGUSTUS gene 723601 724518 1 + . ID=LTnewLM_350024100 LTnewLM_35 AUGUSTUS mRNA 723601 724518 1 + . ID=LTnewLM_350024100.1;Parent=LTnewLM_350024100 LTnewLM_35 AUGUSTUS CDS 723601 724518 1 + 0 ID=LTnewLM_350024100.1:CDS:1;Parent=LTnewLM_350024100.1 ### LTnewLM_35 . polypeptide 723601 724518 . + . ID=LTnewLM_350024100.1:pep;Derives_from=LTnewLM_350024100.1;orthologous_to=LTnewLM_350024000.1,LTnewLM_350024200.1,LmjF.35.1880_mRNA,LmjF.35.1890_mRNA,LmjF.35.1900_mRNA;ortholog_cluster=OG0000071;product=term%3DRibosomal large subunit proteins 60S L5%2C and 50S L18/Ribosomal L18 C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17144|Pfam:PF14204 LTnewLM_35 Pfam protein_match 723640 724140 . + . Parent=LTnewLM_350024100.1:pep;Name=PF17144;signature_desc=Ribosomal large subunit proteins 60S L5%2C and 50S L18 LTnewLM_35 Pfam protein_match 724333 724497 . + . Parent=LTnewLM_350024100.1:pep;Name=PF14204;signature_desc=Ribosomal L18 C-terminal region ### LTnewLM_35 AUGUSTUS gene 725762 726679 1 + . ID=LTnewLM_350024200 LTnewLM_35 AUGUSTUS mRNA 725762 726679 1 + . ID=LTnewLM_350024200.1;Parent=LTnewLM_350024200 LTnewLM_35 AUGUSTUS CDS 725762 726679 1 + 0 ID=LTnewLM_350024200.1:CDS:1;Parent=LTnewLM_350024200.1 ### LTnewLM_35 . polypeptide 725762 726679 . + . ID=LTnewLM_350024200.1:pep;Derives_from=LTnewLM_350024200.1;orthologous_to=LTnewLM_350024000.1,LTnewLM_350024100.1,LmjF.35.1880_mRNA,LmjF.35.1890_mRNA,LmjF.35.1900_mRNA;ortholog_cluster=OG0000071;product=term%3DRibosomal large subunit proteins 60S L5%2C and 50S L18/Ribosomal L18 C-terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17144|Pfam:PF14204 LTnewLM_35 Pfam protein_match 725801 726301 . + . Parent=LTnewLM_350024200.1:pep;Name=PF17144;signature_desc=Ribosomal large subunit proteins 60S L5%2C and 50S L18 LTnewLM_35 Pfam protein_match 726494 726658 . + . Parent=LTnewLM_350024200.1:pep;Name=PF14204;signature_desc=Ribosomal L18 C-terminal region ### LTnewLM_35 AUGUSTUS gene 727525 728139 1 + . ID=LTnewLM_350024300 LTnewLM_35 AUGUSTUS mRNA 727525 728139 1 + . ID=LTnewLM_350024300.1;Parent=LTnewLM_350024300 LTnewLM_35 AUGUSTUS CDS 727525 728139 1 + 0 ID=LTnewLM_350024300.1:CDS:1;Parent=LTnewLM_350024300.1 ### LTnewLM_35 . polypeptide 727525 728139 . + . ID=LTnewLM_350024300.1:pep;Derives_from=LTnewLM_350024300.1;orthologous_to=LTnewLM_300044500.1,LmjF.30.3650_mRNA,LmjF.35.1910_mRNA;ortholog_cluster=OG0000215;product=term%3DRibosomal L15%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00827;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_35 Pfam protein_match 727528 728091 . + . Parent=LTnewLM_350024300.1:pep;Name=PF00827;signature_desc=Ribosomal L15;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 729152 729469 1 + . ID=LTnewLM_350024400 LTnewLM_35 AUGUSTUS mRNA 729152 729469 1 + . ID=LTnewLM_350024400.1;Parent=LTnewLM_350024400 LTnewLM_35 AUGUSTUS CDS 729152 729469 1 + 0 ID=LTnewLM_350024400.1:CDS:1;Parent=LTnewLM_350024400.1 ### LTnewLM_35 . polypeptide 729152 729469 . + . ID=LTnewLM_350024400.1:pep;Derives_from=LTnewLM_350024400.1;orthologous_to=LmjF.21.0730_mRNA;ortholog_cluster=OG0005823;product=term%3DRibosomal protein L36e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01158;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 729170 729451 . + . Parent=LTnewLM_350024400.1:pep;Name=PF01158;signature_desc=Ribosomal protein L36e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 730158 731132 1 + . ID=LTnewLM_350024500 LTnewLM_35 AUGUSTUS mRNA 730158 731132 1 + . ID=LTnewLM_350024500.1;Parent=LTnewLM_350024500 LTnewLM_35 AUGUSTUS CDS 730158 731132 1 + 0 ID=LTnewLM_350024500.1:CDS:1;Parent=LTnewLM_350024500.1 ### LTnewLM_35 . polypeptide 730158 731132 . + . ID=LTnewLM_350024500.1:pep;Derives_from=LTnewLM_350024500.1;orthologous_to=LmjF.35.1930_mRNA;ortholog_cluster=OG0005824;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 731960 733347 . + . ID=LTnewLM_350024600:pseudogene;coverage=0.997;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1940_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 731960 733347 . + . ID=LTnewLM_350024600.1;Parent=LTnewLM_350024600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 731960 733347 . + . ID=LTnewLM_350024600.1:pseudogenic_exon:1;Parent=LTnewLM_350024600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 731960 733347 . + . ID=LTnewLM_350024600.1:pep;Derives_from=LTnewLM_350024600.1;orthologous_to=LmjF.35.1940_mRNA;ortholog_cluster=OG0007660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 734055 735914 1 + . ID=LTnewLM_350024700 LTnewLM_35 AUGUSTUS mRNA 734055 735914 1 + . ID=LTnewLM_350024700.1;Parent=LTnewLM_350024700 LTnewLM_35 AUGUSTUS CDS 734055 735914 1 + 0 ID=LTnewLM_350024700.1:CDS:1;Parent=LTnewLM_350024700.1 ### LTnewLM_35 . polypeptide 734055 735914 . + . ID=LTnewLM_350024700.1:pep;Derives_from=LTnewLM_350024700.1;orthologous_to=LmjF.35.1945_mRNA;ortholog_cluster=OG0005825;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 736640 737347 1 + . ID=LTnewLM_350024800 LTnewLM_35 AUGUSTUS mRNA 736640 737347 1 + . ID=LTnewLM_350024800.1;Parent=LTnewLM_350024800 LTnewLM_35 AUGUSTUS CDS 736640 737347 1 + 0 ID=LTnewLM_350024800.1:CDS:1;Parent=LTnewLM_350024800.1 ### LTnewLM_35 . polypeptide 736640 737347 . + . ID=LTnewLM_350024800.1:pep;Derives_from=LTnewLM_350024800.1;orthologous_to=LmjF.35.1950_mRNA;ortholog_cluster=OG0005826;product=term%3DATP11 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06644;Ontology_term=GO:0006461,GO:0005739 LTnewLM_35 Pfam protein_match 736679 737179 . + . Parent=LTnewLM_350024800.1:pep;Name=PF06644;signature_desc=ATP11 protein;Ontology_term=GO:0006461,GO:0005739 ### LTnewLM_35 AUGUSTUS gene 738875 739510 1 + . ID=LTnewLM_350024900 LTnewLM_35 AUGUSTUS mRNA 738875 739510 1 + . ID=LTnewLM_350024900.1;Parent=LTnewLM_350024900 LTnewLM_35 AUGUSTUS CDS 738875 739510 1 + 0 ID=LTnewLM_350024900.1:CDS:1;Parent=LTnewLM_350024900.1 ### LTnewLM_35 . polypeptide 738875 739510 . + . ID=LTnewLM_350024900.1:pep;Derives_from=LTnewLM_350024900.1;orthologous_to=LmjF.35.1960_mRNA;ortholog_cluster=OG0005827;product=term%3DSLOG cluster4 family/Possible lysine decarboxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18306|Pfam:PF03641 LTnewLM_35 Pfam protein_match 738914 739294 . + . Parent=LTnewLM_350024900.1:pep;Name=PF18306;signature_desc=SLOG cluster4 family LTnewLM_35 Pfam protein_match 739082 739459 . + . Parent=LTnewLM_350024900.1:pep;Name=PF03641;signature_desc=Possible lysine decarboxylase ### LTnewLM_35 . pseudogene 741980 743306 . + . ID=LTnewLM_350025000:pseudogene;coverage=0.987;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.1970_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 741980 743306 . + . ID=LTnewLM_350025000.1;Parent=LTnewLM_350025000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 741980 743306 . + . ID=LTnewLM_350025000.1:pseudogenic_exon:1;Parent=LTnewLM_350025000.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 741980 743306 . + . ID=LTnewLM_350025000.1:pep;Derives_from=LTnewLM_350025000.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 744154 745926 1 + . ID=LTnewLM_350025100 LTnewLM_35 AUGUSTUS mRNA 744154 745926 1 + . ID=LTnewLM_350025100.1;Parent=LTnewLM_350025100 LTnewLM_35 AUGUSTUS CDS 744154 745926 1 + 0 ID=LTnewLM_350025100.1:CDS:1;Parent=LTnewLM_350025100.1 ### LTnewLM_35 . polypeptide 744154 745926 . + . ID=LTnewLM_350025100.1:pep;Derives_from=LTnewLM_350025100.1;orthologous_to=LmjF.35.1980_mRNA;ortholog_cluster=OG0005828;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 747072 750257 1 + . ID=LTnewLM_350025200 LTnewLM_35 AUGUSTUS mRNA 747072 750257 1 + . ID=LTnewLM_350025200.1;Parent=LTnewLM_350025200 LTnewLM_35 AUGUSTUS CDS 747072 750257 1 + 0 ID=LTnewLM_350025200.1:CDS:1;Parent=LTnewLM_350025200.1 ### LTnewLM_35 . polypeptide 747072 750257 . + . ID=LTnewLM_350025200.1:pep;Derives_from=LTnewLM_350025200.1;orthologous_to=LmjF.35.1990_mRNA;ortholog_cluster=OG0005829;product=term%3DU3 small nucleolar RNA-associated protein 6%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08640 LTnewLM_35 Pfam protein_match 747102 747305 . + . Parent=LTnewLM_350025200.1:pep;Name=PF08640;signature_desc=U3 small nucleolar RNA-associated protein 6 ### LTnewLM_35 AUGUSTUS gene 751401 754145 1 + . ID=LTnewLM_350025300 LTnewLM_35 AUGUSTUS mRNA 751401 754145 1 + . ID=LTnewLM_350025300.1;Parent=LTnewLM_350025300 LTnewLM_35 AUGUSTUS CDS 751401 754145 1 + 0 ID=LTnewLM_350025300.1:CDS:1;Parent=LTnewLM_350025300.1 ### LTnewLM_35 . polypeptide 751401 754145 . + . ID=LTnewLM_350025300.1:pep;Derives_from=LTnewLM_350025300.1;orthologous_to=LmjF.35.2000_mRNA;ortholog_cluster=OG0005830;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 755563 756312 1 + . ID=LTnewLM_350025400 LTnewLM_35 AUGUSTUS mRNA 755563 756312 1 + . ID=LTnewLM_350025400.1;Parent=LTnewLM_350025400 LTnewLM_35 AUGUSTUS CDS 755563 756312 1 + 0 ID=LTnewLM_350025400.1:CDS:1;Parent=LTnewLM_350025400.1 ### LTnewLM_35 . polypeptide 755563 756312 . + . ID=LTnewLM_350025400.1:pep;Derives_from=LTnewLM_350025400.1;orthologous_to=LTnewLM_210027500.1,LmjF.21.1780_mRNA,LmjF.35.2010_mRNA;ortholog_cluster=OG0000157;product=term%3DRibosomal protein S6e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01092;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 755563 755946 . + . Parent=LTnewLM_350025400.1:pep;Name=PF01092;signature_desc=Ribosomal protein S6e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 758160 759281 1 + . ID=LTnewLM_350025500 LTnewLM_35 AUGUSTUS mRNA 758160 759281 1 + . ID=LTnewLM_350025500.1;Parent=LTnewLM_350025500 LTnewLM_35 AUGUSTUS CDS 758160 759281 1 + 0 ID=LTnewLM_350025500.1:CDS:1;Parent=LTnewLM_350025500.1 ### LTnewLM_35 . polypeptide 758160 759281 . + . ID=LTnewLM_350025500.1:pep;Derives_from=LTnewLM_350025500.1;orthologous_to=LmjF.35.2020_mRNA;ortholog_cluster=OG0005831;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 761155 765419 0.58 + . ID=LTnewLM_350025600 LTnewLM_35 AUGUSTUS mRNA 761155 765419 0.58 + . ID=LTnewLM_350025600.1;Parent=LTnewLM_350025600 LTnewLM_35 AUGUSTUS CDS 761155 762622 0.67 + 0 ID=LTnewLM_350025600.1:CDS:1;Parent=LTnewLM_350025600.1 LTnewLM_35 AUGUSTUS CDS 762685 765419 0.6 + 2 ID=LTnewLM_350025600.1:CDS:2;Parent=LTnewLM_350025600.1 ### LTnewLM_35 . polypeptide 761155 765419 . + . ID=LTnewLM_350025600.1:pep;Derives_from=LTnewLM_350025600.1;orthologous_to=LmjF.35.2030_mRNA;ortholog_cluster=OG0005832;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 766728 778052 1 + . ID=LTnewLM_350025700 LTnewLM_35 AUGUSTUS mRNA 766728 778052 1 + . ID=LTnewLM_350025700.1;Parent=LTnewLM_350025700 LTnewLM_35 AUGUSTUS CDS 766728 778052 1 + 0 ID=LTnewLM_350025700.1:CDS:1;Parent=LTnewLM_350025700.1 ### LTnewLM_35 . polypeptide 766728 778052 . + . ID=LTnewLM_350025700.1:pep;Derives_from=LTnewLM_350025700.1;orthologous_to=LmjF.35.2040_mRNA;ortholog_cluster=OG0005833;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat/Ankyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF00023|Pfam:PF13857;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 767670 767870 . + . Parent=LTnewLM_350025700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_35 Pfam protein_match 767694 767948 . + . Parent=LTnewLM_350025700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_35 Pfam protein_match 767787 767873 . + . Parent=LTnewLM_350025700.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 773019 773201 . + . Parent=LTnewLM_350025700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_35 Pfam protein_match 773091 773237 . + . Parent=LTnewLM_350025700.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_35 AUGUSTUS gene 779036 779437 1 + . ID=LTnewLM_350025800 LTnewLM_35 AUGUSTUS mRNA 779036 779437 1 + . ID=LTnewLM_350025800.1;Parent=LTnewLM_350025800 LTnewLM_35 AUGUSTUS CDS 779036 779437 1 + 0 ID=LTnewLM_350025800.1:CDS:1;Parent=LTnewLM_350025800.1 ### LTnewLM_35 . polypeptide 779036 779437 . + . ID=LTnewLM_350025800.1:pep;Derives_from=LTnewLM_350025800.1;orthologous_to=LmjF.35.2050_mRNA;ortholog_cluster=OG0005834;product=term%3DRibosomal protein L32%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01655;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 779078 779398 . + . Parent=LTnewLM_350025800.1:pep;Name=PF01655;signature_desc=Ribosomal protein L32;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 780753 782201 1 + . ID=LTnewLM_350025900 LTnewLM_35 AUGUSTUS mRNA 780753 782201 1 + . ID=LTnewLM_350025900.1;Parent=LTnewLM_350025900 LTnewLM_35 AUGUSTUS CDS 780753 782201 1 + 0 ID=LTnewLM_350025900.1:CDS:1;Parent=LTnewLM_350025900.1 ### LTnewLM_35 . polypeptide 780753 782201 . + . ID=LTnewLM_350025900.1:pep;Derives_from=LTnewLM_350025900.1;orthologous_to=LmjF.35.2060_mRNA;ortholog_cluster=OG0005835;product=term%3DSH3 domain/Variant SH3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00018|Pfam:PF14604|Pfam:PF07653;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 780936 781037 . + . Parent=LTnewLM_350025900.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 781260 781370 . + . Parent=LTnewLM_350025900.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 781260 781379 . + . Parent=LTnewLM_350025900.1:pep;Name=PF14604;signature_desc=Variant SH3 domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 781578 781721 . + . Parent=LTnewLM_350025900.1:pep;Name=PF07653;signature_desc=Variant SH3 domain LTnewLM_35 Pfam protein_match 781584 781715 . + . Parent=LTnewLM_350025900.1:pep;Name=PF00018;signature_desc=SH3 domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 781584 781724 . + . Parent=LTnewLM_350025900.1:pep;Name=PF14604;signature_desc=Variant SH3 domain;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 783150 785264 1 + . ID=LTnewLM_350026000 LTnewLM_35 AUGUSTUS mRNA 783150 785264 1 + . ID=LTnewLM_350026000.1;Parent=LTnewLM_350026000 LTnewLM_35 AUGUSTUS CDS 783150 785264 1 + 0 ID=LTnewLM_350026000.1:CDS:1;Parent=LTnewLM_350026000.1 ### LTnewLM_35 . polypeptide 783150 785264 . + . ID=LTnewLM_350026000.1:pep;Derives_from=LTnewLM_350026000.1;orthologous_to=LmjF.12.0650_mRNA,LmjF.35.2070_mRNA;ortholog_cluster=OG0000467;product=term%3DDeubiquitinating enzyme MINDY-3/4%2C conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13898 LTnewLM_35 Pfam protein_match 784200 785240 . + . Parent=LTnewLM_350026000.1:pep;Name=PF13898;signature_desc=Deubiquitinating enzyme MINDY-3/4%2C conserved domain ### LTnewLM_35 . pseudogene 785698 787863 . + . ID=LTnewLM_350026100:pseudogene;coverage=0.991;sequence_ID=0.893;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2075_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 785698 787863 . + . ID=LTnewLM_350026100.1;Parent=LTnewLM_350026100:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 787156 787863 . + . ID=LTnewLM_350026100.1:pseudogenic_exon:1;Parent=LTnewLM_350026100.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 787480 787863 . + . ID=LTnewLM_350026100.2;Parent=LTnewLM_350026100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 787622 787863 . + . ID=LTnewLM_350026100.2:pseudogenic_exon:1;Parent=LTnewLM_350026100.2;extra_copy_number=0 ### LTnewLM_35 . polypeptide 787156 787863 . + . ID=LTnewLM_350026100.1:pep;Derives_from=LTnewLM_350026100.1;product=term%3Dhypothetical protein ### LTnewLM_35 . polypeptide 787622 787863 . + . ID=LTnewLM_350026100.2:pep;Derives_from=LTnewLM_350026100.2;orthologous_to=LmjF.35.2075.1_mRNA,LmjF.35.2075.2_mRNA;ortholog_cluster=OG0000547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 791852 795529 1 + . ID=LTnewLM_350026200 LTnewLM_35 AUGUSTUS mRNA 791852 795529 1 + . ID=LTnewLM_350026200.1;Parent=LTnewLM_350026200 LTnewLM_35 AUGUSTUS CDS 791852 795529 1 + 0 ID=LTnewLM_350026200.1:CDS:1;Parent=LTnewLM_350026200.1 ### LTnewLM_35 . polypeptide 791852 795529 . + . ID=LTnewLM_350026200.1:pep;Derives_from=LTnewLM_350026200.1;orthologous_to=LmjF.35.2080_mRNA;ortholog_cluster=OG0005836;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702|Pfam:PF13246|Pfam:PF08282|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_35 Pfam protein_match 792452 792655 . + . Parent=LTnewLM_350026200.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_35 Pfam protein_match 792776 793357 . + . Parent=LTnewLM_350026200.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_35 Pfam protein_match 793415 794476 . + . Parent=LTnewLM_350026200.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_35 Pfam protein_match 793631 793900 . + . Parent=LTnewLM_350026200.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_35 Pfam protein_match 794396 794569 . + . Parent=LTnewLM_350026200.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_35 Pfam protein_match 794702 795256 . + . Parent=LTnewLM_350026200.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus ### LTnewLM_35 AUGUSTUS gene 798549 800645 1 + . ID=LTnewLM_350026300 LTnewLM_35 AUGUSTUS mRNA 798549 800645 1 + . ID=LTnewLM_350026300.1;Parent=LTnewLM_350026300 LTnewLM_35 AUGUSTUS CDS 798549 800645 1 + 0 ID=LTnewLM_350026300.1:CDS:1;Parent=LTnewLM_350026300.1 ### LTnewLM_35 . polypeptide 798549 800645 . + . ID=LTnewLM_350026300.1:pep;Derives_from=LTnewLM_350026300.1;orthologous_to=LmjF.35.2090_mRNA;ortholog_cluster=OG0005837;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_35 Pfam protein_match 798582 799052 . + . Parent=LTnewLM_350026300.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_35 Pfam protein_match 798588 799280 . + . Parent=LTnewLM_350026300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_35 Pfam protein_match 799482 799790 . + . Parent=LTnewLM_350026300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_35 AUGUSTUS gene 803530 804321 1 + . ID=LTnewLM_350026400 LTnewLM_35 AUGUSTUS mRNA 803530 804321 1 + . ID=LTnewLM_350026400.1;Parent=LTnewLM_350026400 LTnewLM_35 AUGUSTUS CDS 803530 804321 1 + 0 ID=LTnewLM_350026400.1:CDS:1;Parent=LTnewLM_350026400.1 ### LTnewLM_35 . polypeptide 803530 804321 . + . ID=LTnewLM_350026400.1:pep;Derives_from=LTnewLM_350026400.1;orthologous_to=LTnewLM_230023600.1,LTnewLM_290029200.1,LTnewLM_300035900.1,LTnewLM_330026600.1,LTnewLM_330027000.1;ortholog_cluster=OG0000060;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 804951 807122 1 + . ID=LTnewLM_350026500 LTnewLM_35 AUGUSTUS mRNA 804951 807122 1 + . ID=LTnewLM_350026500.1;Parent=LTnewLM_350026500 LTnewLM_35 AUGUSTUS CDS 804951 807122 1 + 0 ID=LTnewLM_350026500.1:CDS:1;Parent=LTnewLM_350026500.1 ### LTnewLM_35 . polypeptide 804951 807122 . + . ID=LTnewLM_350026500.1:pep;Derives_from=LTnewLM_350026500.1;orthologous_to=LmjF.35.2100_mRNA;ortholog_cluster=OG0005838;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 808711 810930 1 + . ID=LTnewLM_350026600 LTnewLM_35 AUGUSTUS mRNA 808711 810930 1 + . ID=LTnewLM_350026600.1;Parent=LTnewLM_350026600 LTnewLM_35 AUGUSTUS CDS 808711 810930 1 + 0 ID=LTnewLM_350026600.1:CDS:1;Parent=LTnewLM_350026600.1 ### LTnewLM_35 . polypeptide 808711 810930 . + . ID=LTnewLM_350026600.1:pep;Derives_from=LTnewLM_350026600.1;orthologous_to=LmjF.35.2110_mRNA;ortholog_cluster=OG0005839;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 816282 816899 1 + . ID=LTnewLM_350026700 LTnewLM_35 AUGUSTUS mRNA 816282 816899 1 + . ID=LTnewLM_350026700.1;Parent=LTnewLM_350026700 LTnewLM_35 AUGUSTUS CDS 816282 816899 1 + 0 ID=LTnewLM_350026700.1:CDS:1;Parent=LTnewLM_350026700.1 ### LTnewLM_35 . polypeptide 816282 816899 . + . ID=LTnewLM_350026700.1:pep;Derives_from=LTnewLM_350026700.1;orthologous_to=LmjF.35.2120_mRNA;ortholog_cluster=OG0005840;product=term%3DRegulated-SNARE-like domain/Synaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13774|Pfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_35 Pfam protein_match 816426 816611 . + . Parent=LTnewLM_350026700.1:pep;Name=PF13774;signature_desc=Regulated-SNARE-like domain LTnewLM_35 Pfam protein_match 816705 816875 . + . Parent=LTnewLM_350026700.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 818361 819167 1 + . ID=LTnewLM_350026800 LTnewLM_35 AUGUSTUS mRNA 818361 819167 1 + . ID=LTnewLM_350026800.1;Parent=LTnewLM_350026800 LTnewLM_35 AUGUSTUS CDS 818361 819167 1 + 0 ID=LTnewLM_350026800.1:CDS:1;Parent=LTnewLM_350026800.1 ### LTnewLM_35 . polypeptide 818361 819167 . + . ID=LTnewLM_350026800.1:pep;Derives_from=LTnewLM_350026800.1;orthologous_to=LmjF.35.2125_mRNA;ortholog_cluster=OG0005841;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 820230 821744 1 + . ID=LTnewLM_350026900 LTnewLM_35 AUGUSTUS mRNA 820230 821744 1 + . ID=LTnewLM_350026900.1;Parent=LTnewLM_350026900 LTnewLM_35 AUGUSTUS CDS 820230 821129 1 + 0 ID=LTnewLM_350026900.1:CDS:1;Parent=LTnewLM_350026900.1 LTnewLM_35 AUGUSTUS CDS 821199 821744 1 + 0 ID=LTnewLM_350026900.1:CDS:2;Parent=LTnewLM_350026900.1 ### LTnewLM_35 . polypeptide 820230 821744 . + . ID=LTnewLM_350026900.1:pep;Derives_from=LTnewLM_350026900.1;orthologous_to=LmjF.35.2130_mRNA;ortholog_cluster=OG0005842;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 825766 827403 1 + . ID=LTnewLM_350027000 LTnewLM_35 AUGUSTUS mRNA 825766 827403 1 + . ID=LTnewLM_350027000.1;Parent=LTnewLM_350027000 LTnewLM_35 AUGUSTUS CDS 825766 827403 1 + 0 ID=LTnewLM_350027000.1:CDS:1;Parent=LTnewLM_350027000.1 ### LTnewLM_35 . polypeptide 825766 827403 . + . ID=LTnewLM_350027000.1:pep;Derives_from=LTnewLM_350027000.1;orthologous_to=LmjF.35.2140_mRNA;ortholog_cluster=OG0005843;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 828102 829424 1 + . ID=LTnewLM_350027100 LTnewLM_35 AUGUSTUS mRNA 828102 829424 1 + . ID=LTnewLM_350027100.1;Parent=LTnewLM_350027100 LTnewLM_35 AUGUSTUS CDS 828102 829424 1 + 0 ID=LTnewLM_350027100.1:CDS:1;Parent=LTnewLM_350027100.1 ### LTnewLM_35 . polypeptide 828102 829424 . + . ID=LTnewLM_350027100.1:pep;Derives_from=LTnewLM_350027100.1;orthologous_to=LmjF.35.2150_mRNA;ortholog_cluster=OG0005844;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_35 Pfam protein_match 828345 828812 . + . Parent=LTnewLM_350027100.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_35 Pfam protein_match 828360 828812 . + . Parent=LTnewLM_350027100.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_35 . pseudogene 830609 831698 . + . ID=LTnewLM_350027200:pseudogene;coverage=0.999;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2160_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 830609 831698 . + . ID=LTnewLM_350027200.1;Parent=LTnewLM_350027200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 830609 831698 . + . ID=LTnewLM_350027200.1:pseudogenic_exon:1;Parent=LTnewLM_350027200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 830609 831698 . + . ID=LTnewLM_350027200.1:pep;Derives_from=LTnewLM_350027200.1;orthologous_to=LmjF.35.2160_mRNA;ortholog_cluster=OG0007661;product=term%3DAdenosine deaminase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00962;Ontology_term=GO:0019239 LTnewLM_35 Pfam protein_match 830651 831391 . + . Parent=LTnewLM_350027200.1:pep;Name=PF00962;signature_desc=Adenosine deaminase;Ontology_term=GO:0019239 ### LTnewLM_35 AUGUSTUS gene 833830 835284 1 + . ID=LTnewLM_350027300 LTnewLM_35 AUGUSTUS mRNA 833830 835284 1 + . ID=LTnewLM_350027300.1;Parent=LTnewLM_350027300 LTnewLM_35 AUGUSTUS CDS 833830 835284 1 + 0 ID=LTnewLM_350027300.1:CDS:1;Parent=LTnewLM_350027300.1 ### LTnewLM_35 . polypeptide 833830 835284 . + . ID=LTnewLM_350027300.1:pep;Derives_from=LTnewLM_350027300.1;orthologous_to=LmjF.35.2170_mRNA;ortholog_cluster=OG0005845;product=term%3Dshort chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_35 Pfam protein_match 834046 834543 . + . Parent=LTnewLM_350027300.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_35 Pfam protein_match 834061 834573 . + . Parent=LTnewLM_350027300.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase ### LTnewLM_35 AUGUSTUS gene 836375 839584 1 + . ID=LTnewLM_350027400 LTnewLM_35 AUGUSTUS mRNA 836375 839584 1 + . ID=LTnewLM_350027400.1;Parent=LTnewLM_350027400 LTnewLM_35 AUGUSTUS CDS 836375 839584 1 + 0 ID=LTnewLM_350027400.1:CDS:1;Parent=LTnewLM_350027400.1 ### LTnewLM_35 . polypeptide 836375 839584 . + . ID=LTnewLM_350027400.1:pep;Derives_from=LTnewLM_350027400.1;orthologous_to=LmjF.35.2180_mRNA;ortholog_cluster=OG0005846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 840261 840755 1 + . ID=LTnewLM_350027500 LTnewLM_35 AUGUSTUS mRNA 840261 840755 1 + . ID=LTnewLM_350027500.1;Parent=LTnewLM_350027500 LTnewLM_35 AUGUSTUS CDS 840261 840755 1 + 0 ID=LTnewLM_350027500.1:CDS:1;Parent=LTnewLM_350027500.1 ### LTnewLM_35 . polypeptide 840261 840755 . + . ID=LTnewLM_350027500.1:pep;Derives_from=LTnewLM_350027500.1;orthologous_to=LTnewLM_240029200.1,LmjF.24.2210_mRNA,LmjF.35.2190_mRNA;ortholog_cluster=OG0000177;product=term%3DRibosomal protein L11%2C N-terminal domain/Ribosomal protein L11%2C RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03946|Pfam:PF00298;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_35 Pfam protein_match 840303 840458 . + . Parent=LTnewLM_350027500.1:pep;Name=PF03946;signature_desc=Ribosomal protein L11%2C N-terminal domain LTnewLM_35 Pfam protein_match 840480 840686 . + . Parent=LTnewLM_350027500.1:pep;Name=PF00298;signature_desc=Ribosomal protein L11%2C RNA binding domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 842172 842996 1 + . ID=LTnewLM_350027600 LTnewLM_35 AUGUSTUS mRNA 842172 842996 1 + . ID=LTnewLM_350027600.1;Parent=LTnewLM_350027600 LTnewLM_35 AUGUSTUS CDS 842172 842996 1 + 0 ID=LTnewLM_350027600.1:CDS:1;Parent=LTnewLM_350027600.1 ### LTnewLM_35 . polypeptide 842172 842996 . + . ID=LTnewLM_350027600.1:pep;Derives_from=LTnewLM_350027600.1;orthologous_to=LmjF.35.2200_mRNA;ortholog_cluster=OG0005847;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 842262 842465 . + . Parent=LTnewLM_350027600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 842760 842963 . + . Parent=LTnewLM_350027600.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_35 AUGUSTUS gene 849405 849683 1 + . ID=LTnewLM_350027700 LTnewLM_35 AUGUSTUS mRNA 849405 849683 1 + . ID=LTnewLM_350027700.1;Parent=LTnewLM_350027700 LTnewLM_35 AUGUSTUS CDS 849405 849683 1 + 0 ID=LTnewLM_350027700.1:CDS:1;Parent=LTnewLM_350027700.1 ### LTnewLM_35 . polypeptide 849405 849683 . + . ID=LTnewLM_350027700.1:pep;Derives_from=LTnewLM_350027700.1;product=term%3DKinetoplastid membrane protein 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03037;Ontology_term=GO:0008284,GO:0006952 LTnewLM_35 Pfam protein_match 849405 849665 . + . Parent=LTnewLM_350027700.1:pep;Name=PF03037;signature_desc=Kinetoplastid membrane protein 11;Ontology_term=GO:0006952,GO:0008284 ### LTnewLM_35 AUGUSTUS gene 852404 852682 1 + . ID=LTnewLM_350027800 LTnewLM_35 AUGUSTUS mRNA 852404 852682 1 + . ID=LTnewLM_350027800.1;Parent=LTnewLM_350027800 LTnewLM_35 AUGUSTUS CDS 852404 852682 1 + 0 ID=LTnewLM_350027800.1:CDS:1;Parent=LTnewLM_350027800.1 ### LTnewLM_35 . polypeptide 852404 852682 . + . ID=LTnewLM_350027800.1:pep;Derives_from=LTnewLM_350027800.1;orthologous_to=LTnewLM_350027900.1,LmjF.35.2210_mRNA,LmjF.35.2220_mRNA;ortholog_cluster=OG0000248;product=term%3DKinetoplastid membrane protein 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03037;Ontology_term=GO:0008284,GO:0006952 LTnewLM_35 Pfam protein_match 852404 852670 . + . Parent=LTnewLM_350027800.1:pep;Name=PF03037;signature_desc=Kinetoplastid membrane protein 11;Ontology_term=GO:0006952,GO:0008284 ### LTnewLM_35 AUGUSTUS gene 854349 854627 1 + . ID=LTnewLM_350027900 LTnewLM_35 AUGUSTUS mRNA 854349 854627 1 + . ID=LTnewLM_350027900.1;Parent=LTnewLM_350027900 LTnewLM_35 AUGUSTUS CDS 854349 854627 1 + 0 ID=LTnewLM_350027900.1:CDS:1;Parent=LTnewLM_350027900.1 ### LTnewLM_35 . polypeptide 854349 854627 . + . ID=LTnewLM_350027900.1:pep;Derives_from=LTnewLM_350027900.1;orthologous_to=LTnewLM_350027800.1,LmjF.35.2210_mRNA,LmjF.35.2220_mRNA;ortholog_cluster=OG0000248;product=term%3DKinetoplastid membrane protein 11%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03037;Ontology_term=GO:0008284,GO:0006952 LTnewLM_35 Pfam protein_match 854349 854615 . + . Parent=LTnewLM_350027900.1:pep;Name=PF03037;signature_desc=Kinetoplastid membrane protein 11;Ontology_term=GO:0006952,GO:0008284 ### LTnewLM_35 AUGUSTUS gene 856204 857079 1 + . ID=LTnewLM_350028000 LTnewLM_35 AUGUSTUS mRNA 856204 857079 1 + . ID=LTnewLM_350028000.1;Parent=LTnewLM_350028000 LTnewLM_35 AUGUSTUS CDS 856204 857079 1 + 0 ID=LTnewLM_350028000.1:CDS:1;Parent=LTnewLM_350028000.1 ### LTnewLM_35 . polypeptide 856204 857079 . + . ID=LTnewLM_350028000.1:pep;Derives_from=LTnewLM_350028000.1;orthologous_to=LmjF.35.2230_mRNA;ortholog_cluster=OG0005848;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 858259 859863 1 + . ID=LTnewLM_350028100 LTnewLM_35 AUGUSTUS mRNA 858259 859863 1 + . ID=LTnewLM_350028100.1;Parent=LTnewLM_350028100 LTnewLM_35 AUGUSTUS CDS 858259 859863 1 + 0 ID=LTnewLM_350028100.1:CDS:1;Parent=LTnewLM_350028100.1 ### LTnewLM_35 . polypeptide 858259 859863 . + . ID=LTnewLM_350028100.1:pep;Derives_from=LTnewLM_350028100.1;orthologous_to=LmjF.35.2240_mRNA;ortholog_cluster=OG0005849;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 861710 870586 . + . ID=LTnewLM_350028200:pseudogene;coverage=0.999;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2250_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 861710 870586 . + . ID=LTnewLM_350028200.1;Parent=LTnewLM_350028200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 861710 870586 . + . ID=LTnewLM_350028200.1:pseudogenic_exon:1;Parent=LTnewLM_350028200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 861710 870586 . + . ID=LTnewLM_350028200.1:pep;Derives_from=LTnewLM_350028200.1;orthologous_to=LmjF.35.2250_mRNA;ortholog_cluster=OG0007662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 872211 873817 . + . ID=LTnewLM_350028300:pseudogene;coverage=0.999;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2260_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 872211 873817 . + . ID=LTnewLM_350028300.1;Parent=LTnewLM_350028300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 872211 873817 . + . ID=LTnewLM_350028300.1:pseudogenic_exon:1;Parent=LTnewLM_350028300.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 872211 873817 . + . ID=LTnewLM_350028300.1:pep;Derives_from=LTnewLM_350028300.1;orthologous_to=LmjF.35.2260_mRNA;ortholog_cluster=OG0007663;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 875437 880329 0.53 + . ID=LTnewLM_350028400 LTnewLM_35 AUGUSTUS mRNA 875437 880329 0.53 + . ID=LTnewLM_350028400.1;Parent=LTnewLM_350028400 LTnewLM_35 AUGUSTUS CDS 875437 880329 0.53 + 0 ID=LTnewLM_350028400.1:CDS:1;Parent=LTnewLM_350028400.1 ### LTnewLM_35 . polypeptide 875437 880329 . + . ID=LTnewLM_350028400.1:pep;Derives_from=LTnewLM_350028400.1;orthologous_to=LmjF.35.2270_mRNA;ortholog_cluster=OG0005850;product=term%3DHelicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00271 LTnewLM_35 Pfam protein_match 877996 878388 . + . Parent=LTnewLM_350028400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_35 AUGUSTUS gene 882248 883645 1 + . ID=LTnewLM_350028500 LTnewLM_35 AUGUSTUS mRNA 882248 883645 1 + . ID=LTnewLM_350028500.1;Parent=LTnewLM_350028500 LTnewLM_35 AUGUSTUS CDS 882248 883645 1 + 0 ID=LTnewLM_350028500.1:CDS:1;Parent=LTnewLM_350028500.1 ### LTnewLM_35 . polypeptide 882248 883645 . + . ID=LTnewLM_350028500.1:pep;Derives_from=LTnewLM_350028500.1;orthologous_to=LmjF.35.2280_mRNA;ortholog_cluster=OG0005851;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 884563 889110 1 + . ID=LTnewLM_350028600 LTnewLM_35 AUGUSTUS mRNA 884563 889110 1 + . ID=LTnewLM_350028600.1;Parent=LTnewLM_350028600 LTnewLM_35 AUGUSTUS CDS 884563 889110 1 + 0 ID=LTnewLM_350028600.1:CDS:1;Parent=LTnewLM_350028600.1 ### LTnewLM_35 . polypeptide 884563 889110 . + . ID=LTnewLM_350028600.1:pep;Derives_from=LTnewLM_350028600.1;orthologous_to=LmjF.35.2290_mRNA;ortholog_cluster=OG0005852;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 889983 891464 0.96 + . ID=LTnewLM_350028700 LTnewLM_35 AUGUSTUS mRNA 889983 891464 0.96 + . ID=LTnewLM_350028700.1;Parent=LTnewLM_350028700 LTnewLM_35 AUGUSTUS CDS 889983 891464 0.96 + 0 ID=LTnewLM_350028700.1:CDS:1;Parent=LTnewLM_350028700.1 ### LTnewLM_35 . polypeptide 889983 891464 . + . ID=LTnewLM_350028700.1:pep;Derives_from=LTnewLM_350028700.1;orthologous_to=LmjF.35.2300_mRNA;ortholog_cluster=OG0005853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 892569 893330 . + . ID=LTnewLM_350028800;coverage=1.0;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.2310_0 LTnewLM_35 Liftoff mRNA 892569 893330 . + . ID=LTnewLM_350028800.1;Parent=LTnewLM_350028800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 892569 893330 . + 0 ID=LTnewLM_350028800.1:CDS:1;Parent=LTnewLM_350028800.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 892569 893330 . + . ID=LTnewLM_350028800.1:pep;Derives_from=LTnewLM_350028800.1;orthologous_to=LmjF.35.2310_mRNA;ortholog_cluster=OG0005854;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 896302 899688 1 + . ID=LTnewLM_350028900 LTnewLM_35 AUGUSTUS mRNA 896302 899688 1 + . ID=LTnewLM_350028900.1;Parent=LTnewLM_350028900 LTnewLM_35 AUGUSTUS CDS 896302 899688 1 + 0 ID=LTnewLM_350028900.1:CDS:1;Parent=LTnewLM_350028900.1 ### LTnewLM_35 . polypeptide 896302 899688 . + . ID=LTnewLM_350028900.1:pep;Derives_from=LTnewLM_350028900.1;orthologous_to=LmjF.35.2320_mRNA;ortholog_cluster=OG0005855;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 897019 897309 . + . Parent=LTnewLM_350028900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 897028 897669 . + . Parent=LTnewLM_350028900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 897490 898086 . + . Parent=LTnewLM_350028900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 902917 905676 1 + . ID=LTnewLM_350029000 LTnewLM_35 AUGUSTUS mRNA 902917 905676 1 + . ID=LTnewLM_350029000.1;Parent=LTnewLM_350029000 LTnewLM_35 AUGUSTUS CDS 902917 905676 1 + 0 ID=LTnewLM_350029000.1:CDS:1;Parent=LTnewLM_350029000.1 ### LTnewLM_35 . polypeptide 902917 905676 . + . ID=LTnewLM_350029000.1:pep;Derives_from=LTnewLM_350029000.1;orthologous_to=LmjF.35.2330_mRNA;ortholog_cluster=OG0005856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 908891 910924 1 + . ID=LTnewLM_350029100 LTnewLM_35 AUGUSTUS mRNA 908891 910924 1 + . ID=LTnewLM_350029100.1;Parent=LTnewLM_350029100 LTnewLM_35 AUGUSTUS CDS 908891 910924 1 + 0 ID=LTnewLM_350029100.1:CDS:1;Parent=LTnewLM_350029100.1 ### LTnewLM_35 . polypeptide 908891 910924 . + . ID=LTnewLM_350029100.1:pep;Derives_from=LTnewLM_350029100.1;orthologous_to=LmjF.35.2340_mRNA;ortholog_cluster=OG0005857;product=term%3DCAF1 family ribonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04857;Ontology_term=GO:0005634 LTnewLM_35 Pfam protein_match 908897 910564 . + . Parent=LTnewLM_350029100.1:pep;Name=PF04857;signature_desc=CAF1 family ribonuclease;Ontology_term=GO:0005634 ### LTnewLM_35 AUGUSTUS gene 912057 913511 1 + . ID=LTnewLM_350029200 LTnewLM_35 AUGUSTUS mRNA 912057 913511 1 + . ID=LTnewLM_350029200.1;Parent=LTnewLM_350029200 LTnewLM_35 AUGUSTUS CDS 912057 913511 1 + 0 ID=LTnewLM_350029200.1:CDS:1;Parent=LTnewLM_350029200.1 ### LTnewLM_35 . polypeptide 912057 913511 . + . ID=LTnewLM_350029200.1:pep;Derives_from=LTnewLM_350029200.1;orthologous_to=LmjF.35.2350_mRNA;ortholog_cluster=OG0005858;product=term%3DAminopeptidase P%2C N-terminal domain/Metallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05195|Pfam:PF00557;Ontology_term=GO:0030145,GO:0004177 LTnewLM_35 Pfam protein_match 912111 912449 . + . Parent=LTnewLM_350029200.1:pep;Name=PF05195;signature_desc=Aminopeptidase P%2C N-terminal domain;Ontology_term=GO:0004177,GO:0030145 LTnewLM_35 Pfam protein_match 912624 913403 . + . Parent=LTnewLM_350029200.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 ### LTnewLM_35 AUGUSTUS gene 915353 915952 1 + . ID=LTnewLM_350029300 LTnewLM_35 AUGUSTUS mRNA 915353 915952 1 + . ID=LTnewLM_350029300.1;Parent=LTnewLM_350029300 LTnewLM_35 AUGUSTUS CDS 915353 915952 1 + 0 ID=LTnewLM_350029300.1:CDS:1;Parent=LTnewLM_350029300.1 ### LTnewLM_35 . polypeptide 915353 915952 . + . ID=LTnewLM_350029300.1:pep;Derives_from=LTnewLM_350029300.1;orthologous_to=LmjF.35.2360_mRNA;ortholog_cluster=OG0005859;product=term%3DEukaryotic protein of unknown function (DUF1764)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08576 LTnewLM_35 Pfam protein_match 915854 915946 . + . Parent=LTnewLM_350029300.1:pep;Name=PF08576;signature_desc=Eukaryotic protein of unknown function (DUF1764) ### LTnewLM_35 AUGUSTUS gene 916884 919589 1 + . ID=LTnewLM_350029400 LTnewLM_35 AUGUSTUS mRNA 916884 919589 1 + . ID=LTnewLM_350029400.1;Parent=LTnewLM_350029400 LTnewLM_35 AUGUSTUS CDS 916884 919589 1 + 0 ID=LTnewLM_350029400.1:CDS:1;Parent=LTnewLM_350029400.1 ### LTnewLM_35 . polypeptide 916884 919589 . + . ID=LTnewLM_350029400.1:pep;Derives_from=LTnewLM_350029400.1;orthologous_to=LmjF.35.2370_mRNA;ortholog_cluster=OG0005860;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 921926 926101 . + . ID=LTnewLM_350029500;coverage=1.0;sequence_ID=0.939;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.2380_0 LTnewLM_35 Liftoff mRNA 921926 926101 . + . ID=LTnewLM_350029500.1;Parent=LTnewLM_350029500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 921926 926101 . + 0 ID=LTnewLM_350029500.1:CDS:1;Parent=LTnewLM_350029500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 921926 926101 . + . ID=LTnewLM_350029500.1:pep;Derives_from=LTnewLM_350029500.1;orthologous_to=LmjF.35.2380_mRNA;ortholog_cluster=OG0005861;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 932833 933291 1 + . ID=LTnewLM_350029600 LTnewLM_35 AUGUSTUS mRNA 932833 933291 1 + . ID=LTnewLM_350029600.1;Parent=LTnewLM_350029600 LTnewLM_35 AUGUSTUS CDS 932833 933291 1 + 0 ID=LTnewLM_350029600.1:CDS:1;Parent=LTnewLM_350029600.1 ### LTnewLM_35 . polypeptide 932833 933291 . + . ID=LTnewLM_350029600.1:pep;Derives_from=LTnewLM_350029600.1;orthologous_to=LmjF.35.2390_mRNA;ortholog_cluster=OG0005862;product=term%3DSpt4/RpoE2 zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06093 LTnewLM_35 Pfam protein_match 932923 933135 . + . Parent=LTnewLM_350029600.1:pep;Name=PF06093;signature_desc=Spt4/RpoE2 zinc finger ### LTnewLM_35 AUGUSTUS gene 934612 939990 1 + . ID=LTnewLM_350029700 LTnewLM_35 AUGUSTUS mRNA 934612 939990 1 + . ID=LTnewLM_350029700.1;Parent=LTnewLM_350029700 LTnewLM_35 AUGUSTUS CDS 934612 939990 1 + 0 ID=LTnewLM_350029700.1:CDS:1;Parent=LTnewLM_350029700.1 ### LTnewLM_35 . polypeptide 934612 939990 . + . ID=LTnewLM_350029700.1:pep;Derives_from=LTnewLM_350029700.1;orthologous_to=LmjF.35.2400_mRNA;ortholog_cluster=OG0005863;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 942425 945196 1 + . ID=LTnewLM_350029800 LTnewLM_35 AUGUSTUS mRNA 942425 945196 1 + . ID=LTnewLM_350029800.1;Parent=LTnewLM_350029800 LTnewLM_35 AUGUSTUS CDS 942425 945196 1 + 0 ID=LTnewLM_350029800.1:CDS:1;Parent=LTnewLM_350029800.1 ### LTnewLM_35 . polypeptide 942425 945196 . + . ID=LTnewLM_350029800.1:pep;Derives_from=LTnewLM_350029800.1;orthologous_to=LmjF.35.2410_mRNA;ortholog_cluster=OG0005864;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443|Pfam:PF13423;Ontology_term=GO:0006511,GO:0036459 LTnewLM_35 Pfam protein_match 943796 944779 . + . Parent=LTnewLM_350029800.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 LTnewLM_35 Pfam protein_match 944126 944800 . + . Parent=LTnewLM_350029800.1:pep;Name=PF13423;signature_desc=Ubiquitin carboxyl-terminal hydrolase ### LTnewLM_35 AUGUSTUS gene 948405 949658 1 + . ID=LTnewLM_350029900 LTnewLM_35 AUGUSTUS mRNA 948405 949658 1 + . ID=LTnewLM_350029900.1;Parent=LTnewLM_350029900 LTnewLM_35 AUGUSTUS CDS 948405 949658 1 + 0 ID=LTnewLM_350029900.1:CDS:1;Parent=LTnewLM_350029900.1 ### LTnewLM_35 . polypeptide 948405 949658 . + . ID=LTnewLM_350029900.1:pep;Derives_from=LTnewLM_350029900.1;orthologous_to=LmjF.35.2420_mRNA;ortholog_cluster=OG0005865;product=term%3DPX domain/Vps5 C terminal like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00787|Pfam:PF09325;Ontology_term=GO:0035091 LTnewLM_35 Pfam protein_match 948534 948794 . + . Parent=LTnewLM_350029900.1:pep;Name=PF00787;signature_desc=PX domain;Ontology_term=GO:0035091 LTnewLM_35 Pfam protein_match 949035 949619 . + . Parent=LTnewLM_350029900.1:pep;Name=PF09325;signature_desc=Vps5 C terminal like ### LTnewLM_35 AUGUSTUS gene 959820 962171 1 + . ID=LTnewLM_350030000 LTnewLM_35 AUGUSTUS mRNA 959820 962171 1 + . ID=LTnewLM_350030000.1;Parent=LTnewLM_350030000 LTnewLM_35 AUGUSTUS CDS 959820 962171 1 + 0 ID=LTnewLM_350030000.1:CDS:1;Parent=LTnewLM_350030000.1 ### LTnewLM_35 . polypeptide 959820 962171 . + . ID=LTnewLM_350030000.1:pep;Derives_from=LTnewLM_350030000.1;orthologous_to=LmjF.35.2430_mRNA;ortholog_cluster=OG0005866;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 964310 965134 1 + . ID=LTnewLM_350030100 LTnewLM_35 AUGUSTUS mRNA 964310 965134 1 + . ID=LTnewLM_350030100.1;Parent=LTnewLM_350030100 LTnewLM_35 AUGUSTUS CDS 964310 965134 1 + 0 ID=LTnewLM_350030100.1:CDS:1;Parent=LTnewLM_350030100.1 ### LTnewLM_35 . polypeptide 964310 965134 . + . ID=LTnewLM_350030100.1:pep;Derives_from=LTnewLM_350030100.1;orthologous_to=LmjF.35.2440_mRNA;ortholog_cluster=OG0005867;product=term%3DFumarylacetoacetate (FAA) hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01557;Ontology_term=GO:0003824,GO:0008152 LTnewLM_35 Pfam protein_match 964394 965125 . + . Parent=LTnewLM_350030100.1:pep;Name=PF01557;signature_desc=Fumarylacetoacetate (FAA) hydrolase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_35 AUGUSTUS gene 971866 978798 1 + . ID=LTnewLM_350030200 LTnewLM_35 AUGUSTUS mRNA 971866 978798 1 + . ID=LTnewLM_350030200.1;Parent=LTnewLM_350030200 LTnewLM_35 AUGUSTUS CDS 971866 978798 1 + 0 ID=LTnewLM_350030200.1:CDS:1;Parent=LTnewLM_350030200.1 ### LTnewLM_35 . polypeptide 971866 978798 . + . ID=LTnewLM_350030200.1:pep;Derives_from=LTnewLM_350030200.1;orthologous_to=LmjF.35.2450_mRNA;ortholog_cluster=OG0005868;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_35 Pfam protein_match 977617 978792 . + . Parent=LTnewLM_350030200.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_35 AUGUSTUS gene 980851 982026 1 + . ID=LTnewLM_350030300 LTnewLM_35 AUGUSTUS mRNA 980851 982026 1 + . ID=LTnewLM_350030300.1;Parent=LTnewLM_350030300 LTnewLM_35 AUGUSTUS CDS 980851 982026 1 + 0 ID=LTnewLM_350030300.1:CDS:1;Parent=LTnewLM_350030300.1 ### LTnewLM_35 . polypeptide 980851 982026 . + . ID=LTnewLM_350030300.1:pep;Derives_from=LTnewLM_350030300.1;orthologous_to=LmjF.35.2470_mRNA;ortholog_cluster=OG0005869;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 983405 984421 1 + . ID=LTnewLM_350030400 LTnewLM_35 AUGUSTUS mRNA 983405 984421 1 + . ID=LTnewLM_350030400.1;Parent=LTnewLM_350030400 LTnewLM_35 AUGUSTUS CDS 983405 984421 1 + 0 ID=LTnewLM_350030400.1:CDS:1;Parent=LTnewLM_350030400.1 ### LTnewLM_35 . polypeptide 983405 984421 . + . ID=LTnewLM_350030400.1:pep;Derives_from=LTnewLM_350030400.1;orthologous_to=LmjF.35.2480_mRNA;ortholog_cluster=OG0005870;product=term%3DNop53 (60S ribosomal biogenesis)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07767 LTnewLM_35 Pfam protein_match 983417 984247 . + . Parent=LTnewLM_350030400.1:pep;Name=PF07767;signature_desc=Nop53 (60S ribosomal biogenesis) ### LTnewLM_35 AUGUSTUS gene 985461 990416 1 + . ID=LTnewLM_350030500 LTnewLM_35 AUGUSTUS mRNA 985461 990416 1 + . ID=LTnewLM_350030500.1;Parent=LTnewLM_350030500 LTnewLM_35 AUGUSTUS CDS 985461 990416 1 + 0 ID=LTnewLM_350030500.1:CDS:1;Parent=LTnewLM_350030500.1 ### LTnewLM_35 . polypeptide 985461 990416 . + . ID=LTnewLM_350030500.1:pep;Derives_from=LTnewLM_350030500.1;orthologous_to=LmjF.35.2490_mRNA;ortholog_cluster=OG0005871;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 992268 993935 1 + . ID=LTnewLM_350030600 LTnewLM_35 AUGUSTUS mRNA 992268 993935 1 + . ID=LTnewLM_350030600.1;Parent=LTnewLM_350030600 LTnewLM_35 AUGUSTUS CDS 992268 993935 1 + 0 ID=LTnewLM_350030600.1:CDS:1;Parent=LTnewLM_350030600.1 ### LTnewLM_35 . polypeptide 992268 993935 . + . ID=LTnewLM_350030600.1:pep;Derives_from=LTnewLM_350030600.1;orthologous_to=LmjF.35.2500_mRNA;ortholog_cluster=OG0005872;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 995267 995602 1 + . ID=LTnewLM_350030700 LTnewLM_35 AUGUSTUS mRNA 995267 995602 1 + . ID=LTnewLM_350030700.1;Parent=LTnewLM_350030700 LTnewLM_35 AUGUSTUS CDS 995267 995602 1 + 0 ID=LTnewLM_350030700.1:CDS:1;Parent=LTnewLM_350030700.1 ### LTnewLM_35 . polypeptide 995267 995602 . + . ID=LTnewLM_350030700.1:pep;Derives_from=LTnewLM_350030700.1;orthologous_to=LmjF.35.2510_mRNA;ortholog_cluster=OG0005873;product=term%3DYos1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08571 LTnewLM_35 Pfam protein_match 995282 995596 . + . Parent=LTnewLM_350030700.1:pep;Name=PF08571;signature_desc=Yos1-like ### LTnewLM_35 AUGUSTUS gene 996015 997700 1 + . ID=LTnewLM_350030800 LTnewLM_35 AUGUSTUS mRNA 996015 997700 1 + . ID=LTnewLM_350030800.1;Parent=LTnewLM_350030800 LTnewLM_35 AUGUSTUS CDS 996015 997700 1 + 0 ID=LTnewLM_350030800.1:CDS:1;Parent=LTnewLM_350030800.1 ### LTnewLM_35 . polypeptide 996015 997700 . + . ID=LTnewLM_350030800.1:pep;Derives_from=LTnewLM_350030800.1;orthologous_to=LmjF.35.2520_mRNA;ortholog_cluster=OG0005874;product=term%3DRING-type zinc-finger/Ring finger domain/IQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13445|Pfam:PF13639|Pfam:PF00612;Ontology_term=GO:0008270,GO:0005515 LTnewLM_35 Pfam protein_match 996495 996581 . + . Parent=LTnewLM_350030800.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_35 Pfam protein_match 996495 996674 . + . Parent=LTnewLM_350030800.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_35 Pfam protein_match 996729 996785 . + . Parent=LTnewLM_350030800.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 998504 999520 1 + . ID=LTnewLM_350030900 LTnewLM_35 AUGUSTUS mRNA 998504 999520 1 + . ID=LTnewLM_350030900.1;Parent=LTnewLM_350030900 LTnewLM_35 AUGUSTUS CDS 998504 999520 1 + 0 ID=LTnewLM_350030900.1:CDS:1;Parent=LTnewLM_350030900.1 ### LTnewLM_35 . polypeptide 998504 999520 . + . ID=LTnewLM_350030900.1:pep;Derives_from=LTnewLM_350030900.1;orthologous_to=LmjF.35.2530_mRNA;ortholog_cluster=OG0005875;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1000215 1000862 1 + . ID=LTnewLM_350031000 LTnewLM_35 AUGUSTUS mRNA 1000215 1000862 1 + . ID=LTnewLM_350031000.1;Parent=LTnewLM_350031000 LTnewLM_35 AUGUSTUS CDS 1000215 1000862 1 + 0 ID=LTnewLM_350031000.1:CDS:1;Parent=LTnewLM_350031000.1 ### LTnewLM_35 . polypeptide 1000215 1000862 . + . ID=LTnewLM_350031000.1:pep;Derives_from=LTnewLM_350031000.1;orthologous_to=LmjF.35.2540_mRNA;ortholog_cluster=OG0005876;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1003579 1004949 1 + . ID=LTnewLM_350031100 LTnewLM_35 AUGUSTUS mRNA 1003579 1004949 1 + . ID=LTnewLM_350031100.1;Parent=LTnewLM_350031100 LTnewLM_35 AUGUSTUS CDS 1003579 1004949 1 + 0 ID=LTnewLM_350031100.1:CDS:1;Parent=LTnewLM_350031100.1 ### LTnewLM_35 . polypeptide 1003579 1004949 . + . ID=LTnewLM_350031100.1:pep;Derives_from=LTnewLM_350031100.1;orthologous_to=LmjF.35.2550_mRNA;ortholog_cluster=OG0005877;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1004068 1004163 . + . Parent=LTnewLM_350031100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1004395 1004607 . + . Parent=LTnewLM_350031100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_35 AUGUSTUS gene 1007599 1010097 1 + . ID=LTnewLM_350031200 LTnewLM_35 AUGUSTUS mRNA 1007599 1010097 1 + . ID=LTnewLM_350031200.1;Parent=LTnewLM_350031200 LTnewLM_35 AUGUSTUS CDS 1007599 1010097 1 + 0 ID=LTnewLM_350031200.1:CDS:1;Parent=LTnewLM_350031200.1 ### LTnewLM_35 . polypeptide 1007599 1010097 . + . ID=LTnewLM_350031200.1:pep;Derives_from=LTnewLM_350031200.1;orthologous_to=LmjF.35.2560_mRNA;ortholog_cluster=OG0005878;product=term%3DFlavodoxin/FAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00258|Pfam:PF00667;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_35 Pfam protein_match 1008097 1008435 . + . Parent=LTnewLM_350031200.1:pep;Name=PF00258;signature_desc=Flavodoxin;Ontology_term=GO:0010181,GO:0016491 LTnewLM_35 Pfam protein_match 1008784 1009410 . + . Parent=LTnewLM_350031200.1:pep;Name=PF00667;signature_desc=FAD binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 1013021 1013677 1 + . ID=LTnewLM_350031300 LTnewLM_35 AUGUSTUS mRNA 1013021 1013677 1 + . ID=LTnewLM_350031300.1;Parent=LTnewLM_350031300 LTnewLM_35 AUGUSTUS CDS 1013021 1013677 1 + 0 ID=LTnewLM_350031300.1:CDS:1;Parent=LTnewLM_350031300.1 ### LTnewLM_35 . polypeptide 1013021 1013677 . + . ID=LTnewLM_350031300.1:pep;Derives_from=LTnewLM_350031300.1;orthologous_to=LmjF.35.2570_mRNA;ortholog_cluster=OG0005879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1015111 1015686 . + . ID=LTnewLM_350031400:pseudogene;coverage=0.998;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2580_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1015111 1015686 . + . ID=LTnewLM_350031400.1;Parent=LTnewLM_350031400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1015111 1015686 . + . ID=LTnewLM_350031400.1:pseudogenic_exon:1;Parent=LTnewLM_350031400.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1015111 1015686 . + . ID=LTnewLM_350031400.1:pep;Derives_from=LTnewLM_350031400.1;orthologous_to=LmjF.35.2580_mRNA;ortholog_cluster=OG0007664;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1016273 1017511 1 + . ID=LTnewLM_350031500 LTnewLM_35 AUGUSTUS mRNA 1016273 1017511 1 + . ID=LTnewLM_350031500.1;Parent=LTnewLM_350031500 LTnewLM_35 AUGUSTUS CDS 1016273 1017511 1 + 0 ID=LTnewLM_350031500.1:CDS:1;Parent=LTnewLM_350031500.1 ### LTnewLM_35 . polypeptide 1016273 1017511 . + . ID=LTnewLM_350031500.1:pep;Derives_from=LTnewLM_350031500.1;orthologous_to=LmjF.35.2590_mRNA;ortholog_cluster=OG0005880;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_35 Pfam protein_match 1016990 1017364 . + . Parent=LTnewLM_350031500.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_35 AUGUSTUS gene 1018206 1018505 1 + . ID=LTnewLM_350031600 LTnewLM_35 AUGUSTUS mRNA 1018206 1018505 1 + . ID=LTnewLM_350031600.1;Parent=LTnewLM_350031600 LTnewLM_35 AUGUSTUS CDS 1018206 1018505 1 + 0 ID=LTnewLM_350031600.1:CDS:1;Parent=LTnewLM_350031600.1 ### LTnewLM_35 . polypeptide 1018206 1018505 . + . ID=LTnewLM_350031600.1:pep;Derives_from=LTnewLM_350031600.1;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 1018361 1018842 644 - . ID=LTnewLM_350031700:pseudogene;has_internal_stop=true;has_frameshift=true;Target=LmjF.35.2600:mRNA 1 160;original_prot_length=160 LTnewLM_35 . pseudogenic_transcript 1018361 1018842 . - . ID=LTnewLM_350031700.1;Parent=LTnewLM_350031700:pseudogene LTnewLM_35 . pseudogenic_exon 1018361 1018420 . - . ID=LTnewLM_350031700.1:pseudogenic_exon:1;Parent=LTnewLM_350031700.1 LTnewLM_35 . pseudogenic_exon 1018422 1018826 . - . ID=LTnewLM_350031700.1:pseudogenic_exon:2;Parent=LTnewLM_350031700.1 LTnewLM_35 . pseudogenic_exon 1018828 1018842 . - . ID=LTnewLM_350031700.1:pseudogenic_exon:3;Parent=LTnewLM_350031700.1 ### LTnewLM_35 . polypeptide 1018361 1018842 . - . ID=LTnewLM_350031700.1:pep;Derives_from=LTnewLM_350031700.1;orthologous_to=LmjF.35.2600_mRNA;ortholog_cluster=OG0007665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1019049 1019450 1 - . ID=LTnewLM_350031800 LTnewLM_35 AUGUSTUS mRNA 1019049 1019450 1 - . ID=LTnewLM_350031800.1;Parent=LTnewLM_350031800 LTnewLM_35 AUGUSTUS CDS 1019049 1019450 1 - 0 ID=LTnewLM_350031800.1:CDS:1;Parent=LTnewLM_350031800.1 ### LTnewLM_35 . polypeptide 1019049 1019450 . - . ID=LTnewLM_350031800.1:pep;Derives_from=LTnewLM_350031800.1;orthologous_to=LTnewLM_350035300.1;ortholog_cluster=OG0005881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1020025 1021005 1 - . ID=LTnewLM_350031900 LTnewLM_35 AUGUSTUS mRNA 1020025 1021005 1 - . ID=LTnewLM_350031900.1;Parent=LTnewLM_350031900 LTnewLM_35 AUGUSTUS CDS 1020025 1021005 1 - 0 ID=LTnewLM_350031900.1:CDS:1;Parent=LTnewLM_350031900.1 ### LTnewLM_35 . polypeptide 1020025 1021005 . - . ID=LTnewLM_350031900.1:pep;Derives_from=LTnewLM_350031900.1;orthologous_to=LmjF.35.2610_mRNA;ortholog_cluster=OG0005882;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1021623 1022828 1 - . ID=LTnewLM_350032000 LTnewLM_35 AUGUSTUS mRNA 1021623 1022828 1 - . ID=LTnewLM_350032000.1;Parent=LTnewLM_350032000 LTnewLM_35 AUGUSTUS CDS 1021623 1022828 1 - 0 ID=LTnewLM_350032000.1:CDS:1;Parent=LTnewLM_350032000.1 ### LTnewLM_35 . polypeptide 1021623 1022828 . - . ID=LTnewLM_350032000.1:pep;Derives_from=LTnewLM_350032000.1;orthologous_to=LmjF.35.2620_mRNA;ortholog_cluster=OG0005883;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1022307 1022651 . - . Parent=LTnewLM_350032000.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1023328 1025559 1 - . ID=LTnewLM_350032100 LTnewLM_35 AUGUSTUS mRNA 1023328 1025559 1 - . ID=LTnewLM_350032100.1;Parent=LTnewLM_350032100 LTnewLM_35 AUGUSTUS CDS 1023328 1025559 1 - 0 ID=LTnewLM_350032100.1:CDS:1;Parent=LTnewLM_350032100.1 ### LTnewLM_35 . polypeptide 1023328 1025559 . - . ID=LTnewLM_350032100.1:pep;Derives_from=LTnewLM_350032100.1;orthologous_to=LmjF.35.2630_mRNA;ortholog_cluster=OG0005884;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1026351 1028189 1 - . ID=LTnewLM_350032200 LTnewLM_35 AUGUSTUS mRNA 1026351 1028189 1 - . ID=LTnewLM_350032200.1;Parent=LTnewLM_350032200 LTnewLM_35 AUGUSTUS CDS 1026351 1028189 1 - 0 ID=LTnewLM_350032200.1:CDS:1;Parent=LTnewLM_350032200.1 ### LTnewLM_35 . polypeptide 1026351 1028189 . - . ID=LTnewLM_350032200.1:pep;Derives_from=LTnewLM_350032200.1;orthologous_to=LmjF.35.2640_mRNA;ortholog_cluster=OG0005885;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1028857 1029660 1 - . ID=LTnewLM_350032300 LTnewLM_35 AUGUSTUS mRNA 1028857 1029660 1 - . ID=LTnewLM_350032300.1;Parent=LTnewLM_350032300 LTnewLM_35 AUGUSTUS CDS 1028857 1029660 1 - 0 ID=LTnewLM_350032300.1:CDS:1;Parent=LTnewLM_350032300.1 ### LTnewLM_35 . polypeptide 1028857 1029660 . - . ID=LTnewLM_350032300.1:pep;Derives_from=LTnewLM_350032300.1;orthologous_to=LmjF.35.2650_mRNA;ortholog_cluster=OG0005886;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1030542 1032572 1 - . ID=LTnewLM_350032400 LTnewLM_35 AUGUSTUS mRNA 1030542 1032572 1 - . ID=LTnewLM_350032400.1;Parent=LTnewLM_350032400 LTnewLM_35 AUGUSTUS CDS 1030542 1032572 1 - 0 ID=LTnewLM_350032400.1:CDS:1;Parent=LTnewLM_350032400.1 ### LTnewLM_35 . polypeptide 1030542 1032572 . - . ID=LTnewLM_350032400.1:pep;Derives_from=LTnewLM_350032400.1;orthologous_to=LmjF.35.2660_mRNA;ortholog_cluster=OG0005887;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1033362 1033883 1 - . ID=LTnewLM_350032500 LTnewLM_35 AUGUSTUS mRNA 1033362 1033883 1 - . ID=LTnewLM_350032500.1;Parent=LTnewLM_350032500 LTnewLM_35 AUGUSTUS CDS 1033362 1033883 1 - 0 ID=LTnewLM_350032500.1:CDS:1;Parent=LTnewLM_350032500.1 ### LTnewLM_35 . polypeptide 1033362 1033883 . - . ID=LTnewLM_350032500.1:pep;Derives_from=LTnewLM_350032500.1;orthologous_to=LmjF.35.2670_mRNA;ortholog_cluster=OG0005888;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13637|Pfam:PF13857|Pfam:PF13606|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1033413 1033568 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_35 Pfam protein_match 1033437 1033523 . - . Parent=LTnewLM_350032500.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1033455 1033523 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1033467 1033619 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_35 Pfam protein_match 1033506 1033655 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_35 Pfam protein_match 1033536 1033625 . - . Parent=LTnewLM_350032500.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1033536 1033817 . - . Parent=LTnewLM_350032500.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_35 Pfam protein_match 1033542 1033628 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1033566 1033733 . - . Parent=LTnewLM_350032500.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_35 AUGUSTUS gene 1036316 1036648 1 - . ID=LTnewLM_350032600 LTnewLM_35 AUGUSTUS mRNA 1036316 1036648 1 - . ID=LTnewLM_350032600.1;Parent=LTnewLM_350032600 LTnewLM_35 AUGUSTUS CDS 1036316 1036648 1 - 0 ID=LTnewLM_350032600.1:CDS:1;Parent=LTnewLM_350032600.1 ### LTnewLM_35 . polypeptide 1036316 1036648 . - . ID=LTnewLM_350032600.1:pep;Derives_from=LTnewLM_350032600.1;orthologous_to=LmjF.35.2680_mRNA;ortholog_cluster=OG0005889;product=term%3DHeat shock factor binding protein 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06825 LTnewLM_35 Pfam protein_match 1036361 1036510 . - . Parent=LTnewLM_350032600.1:pep;Name=PF06825;signature_desc=Heat shock factor binding protein 1 ### LTnewLM_35 AUGUSTUS gene 1039162 1040577 1 - . ID=LTnewLM_350032700 LTnewLM_35 AUGUSTUS mRNA 1039162 1040577 1 - . ID=LTnewLM_350032700.1;Parent=LTnewLM_350032700 LTnewLM_35 AUGUSTUS CDS 1039162 1040577 1 - 0 ID=LTnewLM_350032700.1:CDS:1;Parent=LTnewLM_350032700.1 ### LTnewLM_35 . polypeptide 1039162 1040577 . - . ID=LTnewLM_350032700.1:pep;Derives_from=LTnewLM_350032700.1;orthologous_to=LmjF.35.2690_mRNA;ortholog_cluster=OG0005890;product=term%3DBTB/POZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02214;Ontology_term=GO:0051260 LTnewLM_35 Pfam protein_match 1039693 1039971 . - . Parent=LTnewLM_350032700.1:pep;Name=PF02214;signature_desc=BTB/POZ domain;Ontology_term=GO:0051260 ### LTnewLM_35 . polypeptide 1041910 1044876 . - . ID=LTnewLM_350032800.1:pep;Derives_from=LTnewLM_350032800.1;orthologous_to=LTnewLM_350032800.2,LmjF.35.2700_mRNA;ortholog_cluster=OG0000468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1041910 1046502 2 - . ID=LTnewLM_350032800 LTnewLM_35 AUGUSTUS mRNA 1041910 1044876 1 - . ID=LTnewLM_350032800.1;Parent=LTnewLM_350032800 LTnewLM_35 AUGUSTUS CDS 1041910 1044876 1 - 0 ID=LTnewLM_350032800.1:CDS:1;Parent=LTnewLM_350032800.1 LTnewLM_35 AUGUSTUS mRNA 1041910 1046502 1 - . ID=LTnewLM_350032800.2;Parent=LTnewLM_350032800 LTnewLM_35 AUGUSTUS CDS 1041910 1046502 1 - 0 ID=LTnewLM_350032800.2:CDS:1;Parent=LTnewLM_350032800.2 ### LTnewLM_35 . polypeptide 1041910 1046502 . - . ID=LTnewLM_350032800.2:pep;Derives_from=LTnewLM_350032800.2;orthologous_to=LTnewLM_350032800.1,LmjF.35.2700_mRNA;ortholog_cluster=OG0000468;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1047570 1049108 1 - . ID=LTnewLM_350032900 LTnewLM_35 AUGUSTUS mRNA 1047570 1049108 1 - . ID=LTnewLM_350032900.1;Parent=LTnewLM_350032900 LTnewLM_35 AUGUSTUS CDS 1047570 1049108 1 - 0 ID=LTnewLM_350032900.1:CDS:1;Parent=LTnewLM_350032900.1 ### LTnewLM_35 . polypeptide 1047570 1049108 . - . ID=LTnewLM_350032900.1:pep;Derives_from=LTnewLM_350032900.1;orthologous_to=LmjF.35.2710_mRNA;ortholog_cluster=OG0005891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1050579 1051487 1 - . ID=LTnewLM_350033000 LTnewLM_35 AUGUSTUS mRNA 1050579 1051487 1 - . ID=LTnewLM_350033000.1;Parent=LTnewLM_350033000 LTnewLM_35 AUGUSTUS CDS 1050579 1051487 1 - 0 ID=LTnewLM_350033000.1:CDS:1;Parent=LTnewLM_350033000.1 ### LTnewLM_35 . polypeptide 1050579 1051487 . - . ID=LTnewLM_350033000.1:pep;Derives_from=LTnewLM_350033000.1;orthologous_to=LmjF.35.2720_mRNA;ortholog_cluster=OG0005892;product=term%3DSNARE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05739;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1050612 1050758 . - . Parent=LTnewLM_350033000.1:pep;Name=PF05739;signature_desc=SNARE domain;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1053598 1055910 1 - . ID=LTnewLM_350033100 LTnewLM_35 AUGUSTUS mRNA 1053598 1055910 1 - . ID=LTnewLM_350033100.1;Parent=LTnewLM_350033100 LTnewLM_35 AUGUSTUS CDS 1053598 1055910 1 - 0 ID=LTnewLM_350033100.1:CDS:1;Parent=LTnewLM_350033100.1 ### LTnewLM_35 . polypeptide 1053598 1055910 . - . ID=LTnewLM_350033100.1:pep;Derives_from=LTnewLM_350033100.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 1058658 1059923 1 - . ID=LTnewLM_350033200 LTnewLM_35 AUGUSTUS mRNA 1058658 1059923 1 - . ID=LTnewLM_350033200.1;Parent=LTnewLM_350033200 LTnewLM_35 AUGUSTUS CDS 1058658 1059923 1 - 0 ID=LTnewLM_350033200.1:CDS:1;Parent=LTnewLM_350033200.1 ### LTnewLM_35 . polypeptide 1058658 1059923 . - . ID=LTnewLM_350033200.1:pep;Derives_from=LTnewLM_350033200.1;orthologous_to=LmjF.35.2730_mRNA;ortholog_cluster=OG0005893;product=term%3DAcyl-CoA dehydrogenase%2C N-terminal domain/Acyl-CoA dehydrogenase%2C middle domain/Acyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02771|Pfam:PF02770|Pfam:PF00441|Pfam:PF08028;Ontology_term=GO:0008152,GO:0055114,GO:0003995,GO:0050660,GO:0016627 LTnewLM_35 Pfam protein_match 1058712 1059152 . - . Parent=LTnewLM_350033200.1:pep;Name=PF00441;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016627,GO:0055114 LTnewLM_35 Pfam protein_match 1058742 1059107 . - . Parent=LTnewLM_350033200.1:pep;Name=PF08028;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain LTnewLM_35 Pfam protein_match 1059189 1059476 . - . Parent=LTnewLM_350033200.1:pep;Name=PF02770;signature_desc=Acyl-CoA dehydrogenase%2C middle domain;Ontology_term=GO:0003995,GO:0055114 LTnewLM_35 Pfam protein_match 1059492 1059821 . - . Parent=LTnewLM_350033200.1:pep;Name=PF02771;signature_desc=Acyl-CoA dehydrogenase%2C N-terminal domain;Ontology_term=GO:0016627,GO:0050660,GO:0008152,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 1064961 1066391 1 - . ID=LTnewLM_350033300 LTnewLM_35 AUGUSTUS mRNA 1064961 1066391 1 - . ID=LTnewLM_350033300.1;Parent=LTnewLM_350033300 LTnewLM_35 AUGUSTUS CDS 1064961 1066391 1 - 0 ID=LTnewLM_350033300.1:CDS:1;Parent=LTnewLM_350033300.1 ### LTnewLM_35 . polypeptide 1064961 1066391 . - . ID=LTnewLM_350033300.1:pep;Derives_from=LTnewLM_350033300.1;orthologous_to=LmjF.35.2740_mRNA;ortholog_cluster=OG0005894;product=term%3DGalactokinase galactose-binding signature/GHMP kinases N terminal domain/GHMP kinases C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10509|Pfam:PF00288|Pfam:PF08544;Ontology_term=GO:0005524 LTnewLM_35 Pfam protein_match 1065075 1065305 . - . Parent=LTnewLM_350033300.1:pep;Name=PF08544;signature_desc=GHMP kinases C terminal LTnewLM_35 Pfam protein_match 1065717 1065968 . - . Parent=LTnewLM_350033300.1:pep;Name=PF00288;signature_desc=GHMP kinases N terminal domain;Ontology_term=GO:0005524 LTnewLM_35 Pfam protein_match 1066173 1066328 . - . Parent=LTnewLM_350033300.1:pep;Name=PF10509;signature_desc=Galactokinase galactose-binding signature ### LTnewLM_35 AUGUSTUS gene 1067483 1069258 1 - . ID=LTnewLM_350033400 LTnewLM_35 AUGUSTUS mRNA 1067483 1069258 1 - . ID=LTnewLM_350033400.1;Parent=LTnewLM_350033400 LTnewLM_35 AUGUSTUS CDS 1067483 1069258 1 - 0 ID=LTnewLM_350033400.1:CDS:1;Parent=LTnewLM_350033400.1 ### LTnewLM_35 . polypeptide 1067483 1069258 . - . ID=LTnewLM_350033400.1:pep;Derives_from=LTnewLM_350033400.1;orthologous_to=LmjF.35.2750_mRNA;ortholog_cluster=OG0005895;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1070051 1071994 1 - . ID=LTnewLM_350033500 LTnewLM_35 AUGUSTUS mRNA 1070051 1071994 1 - . ID=LTnewLM_350033500.1;Parent=LTnewLM_350033500 LTnewLM_35 AUGUSTUS CDS 1070051 1071994 1 - 0 ID=LTnewLM_350033500.1:CDS:1;Parent=LTnewLM_350033500.1 ### LTnewLM_35 . polypeptide 1070051 1071994 . - . ID=LTnewLM_350033500.1:pep;Derives_from=LTnewLM_350033500.1;orthologous_to=LmjF.32.3020_mRNA,LmjF.35.2760_mRNA;ortholog_cluster=OG0000469;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_35 Pfam protein_match 1071311 1071667 . - . Parent=LTnewLM_350033500.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_35 AUGUSTUS gene 1073096 1077097 1 - . ID=LTnewLM_350033600 LTnewLM_35 AUGUSTUS mRNA 1073096 1077097 1 - . ID=LTnewLM_350033600.1;Parent=LTnewLM_350033600 LTnewLM_35 AUGUSTUS CDS 1073096 1077097 1 - 0 ID=LTnewLM_350033600.1:CDS:1;Parent=LTnewLM_350033600.1 ### LTnewLM_35 . polypeptide 1073096 1077097 . - . ID=LTnewLM_350033600.1:pep;Derives_from=LTnewLM_350033600.1;orthologous_to=LmjF.35.2770_mRNA;ortholog_cluster=OG0005896;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1075757 1075813 . - . Parent=LTnewLM_350033600.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1080998 1083094 1 - . ID=LTnewLM_350033700 LTnewLM_35 AUGUSTUS mRNA 1080998 1083094 1 - . ID=LTnewLM_350033700.1;Parent=LTnewLM_350033700 LTnewLM_35 AUGUSTUS CDS 1080998 1083094 1 - 0 ID=LTnewLM_350033700.1:CDS:1;Parent=LTnewLM_350033700.1 ### LTnewLM_35 . polypeptide 1080998 1083094 . - . ID=LTnewLM_350033700.1:pep;Derives_from=LTnewLM_350033700.1;orthologous_to=LmjF.35.2780_mRNA;ortholog_cluster=OG0005897;product=term%3DMajor Facilitator Superfamily/Sugar (and other) transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF00083;Ontology_term=GO:0055085,GO:0022857,GO:0016021 LTnewLM_35 Pfam protein_match 1082471 1082965 . - . Parent=LTnewLM_350033700.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_35 Pfam protein_match 1082543 1082878 . - . Parent=LTnewLM_350033700.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1086218 1086718 1 - . ID=LTnewLM_350033800 LTnewLM_35 AUGUSTUS mRNA 1086218 1086718 1 - . ID=LTnewLM_350033800.1;Parent=LTnewLM_350033800 LTnewLM_35 AUGUSTUS CDS 1086218 1086718 1 - 0 ID=LTnewLM_350033800.1:CDS:1;Parent=LTnewLM_350033800.1 ### LTnewLM_35 . polypeptide 1086218 1086718 . - . ID=LTnewLM_350033800.1:pep;Derives_from=LTnewLM_350033800.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 1091811 1093013 1 - . ID=LTnewLM_350033900 LTnewLM_35 AUGUSTUS mRNA 1091811 1093013 1 - . ID=LTnewLM_350033900.1;Parent=LTnewLM_350033900 LTnewLM_35 AUGUSTUS CDS 1091811 1093013 1 - 0 ID=LTnewLM_350033900.1:CDS:1;Parent=LTnewLM_350033900.1 ### LTnewLM_35 . polypeptide 1091811 1093013 . - . ID=LTnewLM_350033900.1:pep;Derives_from=LTnewLM_350033900.1;orthologous_to=LmjF.35.2790_mRNA;ortholog_cluster=OG0005898;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 1094014 1094343 . - . ID=LTnewLM_350034000.1:pep;Derives_from=LTnewLM_350034000.1;orthologous_to=LTnewLM_350034000.2;ortholog_cluster=OG0005899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1094014 1094693 1.91 - . ID=LTnewLM_350034000 LTnewLM_35 AUGUSTUS mRNA 1094014 1094343 0.93 - . ID=LTnewLM_350034000.1;Parent=LTnewLM_350034000 LTnewLM_35 AUGUSTUS CDS 1094014 1094343 0.93 - 0 ID=LTnewLM_350034000.1:CDS:1;Parent=LTnewLM_350034000.1 LTnewLM_35 AUGUSTUS mRNA 1094014 1094693 0.98 - . ID=LTnewLM_350034000.2;Parent=LTnewLM_350034000 LTnewLM_35 AUGUSTUS CDS 1094014 1094409 1 - 0 ID=LTnewLM_350034000.2:CDS:1;Parent=LTnewLM_350034000.2 LTnewLM_35 AUGUSTUS CDS 1094529 1094693 0.98 - 0 ID=LTnewLM_350034000.2:CDS:2;Parent=LTnewLM_350034000.2 ### LTnewLM_35 . polypeptide 1094014 1094693 . - . ID=LTnewLM_350034000.2:pep;Derives_from=LTnewLM_350034000.2;orthologous_to=LTnewLM_350034000.1;ortholog_cluster=OG0005899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1097948 1099150 1 - . ID=LTnewLM_350034100 LTnewLM_35 AUGUSTUS mRNA 1097948 1099150 1 - . ID=LTnewLM_350034100.1;Parent=LTnewLM_350034100 LTnewLM_35 AUGUSTUS CDS 1097948 1099150 1 - 0 ID=LTnewLM_350034100.1:CDS:1;Parent=LTnewLM_350034100.1 ### LTnewLM_35 . polypeptide 1097948 1099150 . - . ID=LTnewLM_350034100.1:pep;Derives_from=LTnewLM_350034100.1;orthologous_to=LTnewLM_000005600.1,LmjF.35.2800_mRNA;ortholog_cluster=OG0000470;product=term%3DChlamydia CHLPS protein (DUF818)/alpha/beta hydrolase fold/Serine aminopeptidase%2C S33%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05677|Pfam:PF00561|Pfam:PF12146 LTnewLM_35 Pfam protein_match 1098206 1098505 . - . Parent=LTnewLM_350034100.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_35 Pfam protein_match 1098212 1098595 . - . Parent=LTnewLM_350034100.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_35 Pfam protein_match 1098257 1098610 . - . Parent=LTnewLM_350034100.1:pep;Name=PF05677;signature_desc=Chlamydia CHLPS protein (DUF818) ### LTnewLM_35 . pseudogene 1101854 1103969 . - . ID=LTnewLM_350034200:pseudogene;coverage=0.998;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2810_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1101854 1103969 . - . ID=LTnewLM_350034200.1;Parent=LTnewLM_350034200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1101854 1103969 . - . ID=LTnewLM_350034200.1:pseudogenic_exon:1;Parent=LTnewLM_350034200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1101854 1103969 . - . ID=LTnewLM_350034200.1:pep;Derives_from=LTnewLM_350034200.1;orthologous_to=LTnewLM_000005700.1,LmjF.35.2810_mRNA;ortholog_cluster=OG0000299;product=term%3DMajor Facilitator Superfamily/Sugar (and other) transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF00083;Ontology_term=GO:0055085,GO:0022857,GO:0016021 LTnewLM_35 Pfam protein_match 1103460 1103813 . - . Parent=LTnewLM_350034200.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_35 Pfam protein_match 1103502 1103738 . - . Parent=LTnewLM_350034200.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1110685 1112628 1 - . ID=LTnewLM_350034300 LTnewLM_35 AUGUSTUS mRNA 1110685 1112628 1 - . ID=LTnewLM_350034300.1;Parent=LTnewLM_350034300 LTnewLM_35 AUGUSTUS CDS 1110685 1112628 1 - 0 ID=LTnewLM_350034300.1:CDS:1;Parent=LTnewLM_350034300.1 ### LTnewLM_35 . polypeptide 1110685 1112628 . - . ID=LTnewLM_350034300.1:pep;Derives_from=LTnewLM_350034300.1;orthologous_to=LmjF.35.2820_mRNA;ortholog_cluster=OG0005900;product=term%3DMajor Facilitator Superfamily/Sugar (and other) transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690|Pfam:PF00083;Ontology_term=GO:0055085,GO:0022857,GO:0016021 LTnewLM_35 Pfam protein_match 1112140 1112598 . - . Parent=LTnewLM_350034300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_35 Pfam protein_match 1112155 1112472 . - . Parent=LTnewLM_350034300.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1114278 1115942 1 - . ID=LTnewLM_350034400 LTnewLM_35 AUGUSTUS mRNA 1114278 1115942 1 - . ID=LTnewLM_350034400.1;Parent=LTnewLM_350034400 LTnewLM_35 AUGUSTUS CDS 1114278 1115942 1 - 0 ID=LTnewLM_350034400.1:CDS:1;Parent=LTnewLM_350034400.1 ### LTnewLM_35 . polypeptide 1114278 1115942 . - . ID=LTnewLM_350034400.1:pep;Derives_from=LTnewLM_350034400.1;orthologous_to=LmjF.35.2830_mRNA;ortholog_cluster=OG0005901;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1116416 1117786 . - . ID=LTnewLM_350034500:pseudogene;coverage=1.0;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.2840_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1116416 1117786 . - . ID=LTnewLM_350034500.1;Parent=LTnewLM_350034500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1116416 1117786 . - . ID=LTnewLM_350034500.1:pseudogenic_exon:1;Parent=LTnewLM_350034500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1116416 1117786 . - . ID=LTnewLM_350034500.1:pep;Derives_from=LTnewLM_350034500.1;orthologous_to=LmjF.35.2840_mRNA;ortholog_cluster=OG0007666;product=term%3DAminotransferase class-V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00266;Ontology_term=GO:0008152 LTnewLM_35 Pfam protein_match 1116470 1117336 . - . Parent=LTnewLM_350034500.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 LTnewLM_35 Pfam protein_match 1117391 1117714 . - . Parent=LTnewLM_350034500.1:pep;Name=PF00266;signature_desc=Aminotransferase class-V;Ontology_term=GO:0008152 ### LTnewLM_35 AUGUSTUS gene 1119623 1121323 1 - . ID=LTnewLM_350034600 LTnewLM_35 AUGUSTUS mRNA 1119623 1121323 1 - . ID=LTnewLM_350034600.1;Parent=LTnewLM_350034600 LTnewLM_35 AUGUSTUS CDS 1119623 1121323 1 - 0 ID=LTnewLM_350034600.1:CDS:1;Parent=LTnewLM_350034600.1 ### LTnewLM_35 . polypeptide 1119623 1121323 . - . ID=LTnewLM_350034600.1:pep;Derives_from=LTnewLM_350034600.1;orthologous_to=LmjF.35.2850_mRNA;ortholog_cluster=OG0005902;product=term%3DLeo1-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04004 LTnewLM_35 Pfam protein_match 1120136 1120702 . - . Parent=LTnewLM_350034600.1:pep;Name=PF04004;signature_desc=Leo1-like protein ### LTnewLM_35 AUGUSTUS gene 1122750 1123205 1 - . ID=LTnewLM_350034700 LTnewLM_35 AUGUSTUS mRNA 1122750 1123205 1 - . ID=LTnewLM_350034700.1;Parent=LTnewLM_350034700 LTnewLM_35 AUGUSTUS CDS 1122750 1123205 1 - 0 ID=LTnewLM_350034700.1:CDS:1;Parent=LTnewLM_350034700.1 ### LTnewLM_35 . polypeptide 1122750 1123205 . - . ID=LTnewLM_350034700.1:pep;Derives_from=LTnewLM_350034700.1;orthologous_to=LmjF.35.2860_mRNA;ortholog_cluster=OG0005903;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1123754 1125976 1 - . ID=LTnewLM_350034800 LTnewLM_35 AUGUSTUS mRNA 1123754 1125976 1 - . ID=LTnewLM_350034800.1;Parent=LTnewLM_350034800 LTnewLM_35 AUGUSTUS CDS 1123754 1125976 1 - 0 ID=LTnewLM_350034800.1:CDS:1;Parent=LTnewLM_350034800.1 ### LTnewLM_35 . polypeptide 1123754 1125976 . - . ID=LTnewLM_350034800.1:pep;Derives_from=LTnewLM_350034800.1;orthologous_to=LmjF.35.2870_mRNA;ortholog_cluster=OG0005904;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1126801 1127226 1 - . ID=LTnewLM_350034900 LTnewLM_35 AUGUSTUS mRNA 1126801 1127226 1 - . ID=LTnewLM_350034900.1;Parent=LTnewLM_350034900 LTnewLM_35 AUGUSTUS CDS 1126801 1127226 1 - 0 ID=LTnewLM_350034900.1:CDS:1;Parent=LTnewLM_350034900.1 ### LTnewLM_35 . polypeptide 1126801 1127226 . - . ID=LTnewLM_350034900.1:pep;Derives_from=LTnewLM_350034900.1;orthologous_to=LmjF.35.2880_mRNA;ortholog_cluster=OG0005905;product=term%3DSybindin-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04099;Ontology_term=GO:0005801,GO:0006888 LTnewLM_35 Pfam protein_match 1126822 1127217 . - . Parent=LTnewLM_350034900.1:pep;Name=PF04099;signature_desc=Sybindin-like family;Ontology_term=GO:0006888,GO:0005801 ### LTnewLM_35 AUGUSTUS gene 1128081 1129904 1 - . ID=LTnewLM_350035000 LTnewLM_35 AUGUSTUS mRNA 1128081 1129904 1 - . ID=LTnewLM_350035000.1;Parent=LTnewLM_350035000 LTnewLM_35 AUGUSTUS CDS 1128081 1129904 1 - 0 ID=LTnewLM_350035000.1:CDS:1;Parent=LTnewLM_350035000.1 ### LTnewLM_35 . polypeptide 1128081 1129904 . - . ID=LTnewLM_350035000.1:pep;Derives_from=LTnewLM_350035000.1;orthologous_to=LmjF.35.2890_mRNA;ortholog_cluster=OG0005906;product=term%3DSpoU rRNA Methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00588;Ontology_term=GO:0003723,GO:0008173,GO:0006396 LTnewLM_35 Pfam protein_match 1129053 1129223 . - . Parent=LTnewLM_350035000.1:pep;Name=PF00588;signature_desc=SpoU rRNA Methylase family;Ontology_term=GO:0003723,GO:0008173,GO:0006396 ### LTnewLM_35 AUGUSTUS gene 1130850 1133033 1 - . ID=LTnewLM_350035100 LTnewLM_35 AUGUSTUS mRNA 1130850 1133033 1 - . ID=LTnewLM_350035100.1;Parent=LTnewLM_350035100 LTnewLM_35 AUGUSTUS CDS 1130850 1133033 1 - 0 ID=LTnewLM_350035100.1:CDS:1;Parent=LTnewLM_350035100.1 ### LTnewLM_35 . polypeptide 1130850 1133033 . - . ID=LTnewLM_350035100.1:pep;Derives_from=LTnewLM_350035100.1;orthologous_to=LmjF.35.2900_mRNA;ortholog_cluster=OG0005907;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1133916 1134287 1 - . ID=LTnewLM_350035200 LTnewLM_35 AUGUSTUS mRNA 1133916 1134287 1 - . ID=LTnewLM_350035200.1;Parent=LTnewLM_350035200 LTnewLM_35 AUGUSTUS CDS 1133916 1134287 1 - 0 ID=LTnewLM_350035200.1:CDS:1;Parent=LTnewLM_350035200.1 ### LTnewLM_35 . polypeptide 1133916 1134287 . - . ID=LTnewLM_350035200.1:pep;Derives_from=LTnewLM_350035200.1;orthologous_to=LmjF.35.2910_mRNA;ortholog_cluster=OG0005908;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_35 Pfam protein_match 1133937 1134218 . - . Parent=LTnewLM_350035200.1:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_35 AUGUSTUS gene 1139281 1139673 0.99 - . ID=LTnewLM_350035300 LTnewLM_35 AUGUSTUS mRNA 1139281 1139673 0.99 - . ID=LTnewLM_350035300.1;Parent=LTnewLM_350035300 LTnewLM_35 AUGUSTUS CDS 1139281 1139673 0.99 - 0 ID=LTnewLM_350035300.1:CDS:1;Parent=LTnewLM_350035300.1 ### LTnewLM_35 . polypeptide 1139281 1139673 . - . ID=LTnewLM_350035300.1:pep;Derives_from=LTnewLM_350035300.1;orthologous_to=LTnewLM_350031800.1;ortholog_cluster=OG0005881;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1140248 1143679 1 - . ID=LTnewLM_350035400 LTnewLM_35 AUGUSTUS mRNA 1140248 1143679 1 - . ID=LTnewLM_350035400.1;Parent=LTnewLM_350035400 LTnewLM_35 AUGUSTUS CDS 1140248 1143679 1 - 0 ID=LTnewLM_350035400.1:CDS:1;Parent=LTnewLM_350035400.1 ### LTnewLM_35 . polypeptide 1140248 1143679 . - . ID=LTnewLM_350035400.1:pep;Derives_from=LTnewLM_350035400.1;orthologous_to=LmjF.35.2920_mRNA;ortholog_cluster=OG0005909;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1144244 1146100 . - . ID=LTnewLM_350035500;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.2930_0 LTnewLM_35 Liftoff mRNA 1144244 1146100 . - . ID=LTnewLM_350035500.1;Parent=LTnewLM_350035500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1144244 1146100 . - 0 ID=LTnewLM_350035500.1:CDS:1;Parent=LTnewLM_350035500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1144244 1146100 . - . ID=LTnewLM_350035500.1:pep;Derives_from=LTnewLM_350035500.1;orthologous_to=LmjF.35.2930_mRNA;ortholog_cluster=OG0005910;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1149461 1153129 1 - . ID=LTnewLM_350035600 LTnewLM_35 AUGUSTUS mRNA 1149461 1153129 1 - . ID=LTnewLM_350035600.1;Parent=LTnewLM_350035600 LTnewLM_35 AUGUSTUS CDS 1149461 1153129 1 - 0 ID=LTnewLM_350035600.1:CDS:1;Parent=LTnewLM_350035600.1 ### LTnewLM_35 . polypeptide 1149461 1153129 . - . ID=LTnewLM_350035600.1:pep;Derives_from=LTnewLM_350035600.1;orthologous_to=LmjF.35.2940_mRNA;ortholog_cluster=OG0005911;product=term%3DLeucine carboxyl methyltransferase/Cupin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04072|Pfam:PF13621;Ontology_term=GO:0032259,GO:0008168 LTnewLM_35 Pfam protein_match 1149698 1150483 . - . Parent=LTnewLM_350035600.1:pep;Name=PF13621;signature_desc=Cupin-like domain LTnewLM_35 Pfam protein_match 1152242 1152541 . - . Parent=LTnewLM_350035600.1:pep;Name=PF04072;signature_desc=Leucine carboxyl methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_35 AUGUSTUS gene 1153965 1157255 1 - . ID=LTnewLM_350035700 LTnewLM_35 AUGUSTUS mRNA 1153965 1157255 1 - . ID=LTnewLM_350035700.1;Parent=LTnewLM_350035700 LTnewLM_35 AUGUSTUS CDS 1153965 1157255 1 - 0 ID=LTnewLM_350035700.1:CDS:1;Parent=LTnewLM_350035700.1 ### LTnewLM_35 . polypeptide 1153965 1157255 . - . ID=LTnewLM_350035700.1:pep;Derives_from=LTnewLM_350035700.1;orthologous_to=LmjF.35.2950_mRNA;ortholog_cluster=OG0005912;product=term%3DPPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01535 LTnewLM_35 Pfam protein_match 1154277 1154363 . - . Parent=LTnewLM_350035700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_35 Pfam protein_match 1154592 1154666 . - . Parent=LTnewLM_350035700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_35 Pfam protein_match 1154688 1154777 . - . Parent=LTnewLM_350035700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_35 Pfam protein_match 1154793 1154882 . - . Parent=LTnewLM_350035700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_35 Pfam protein_match 1154910 1154990 . - . Parent=LTnewLM_350035700.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_35 AUGUSTUS gene 1158644 1160323 1 - . ID=LTnewLM_350035800 LTnewLM_35 AUGUSTUS mRNA 1158644 1160323 1 - . ID=LTnewLM_350035800.1;Parent=LTnewLM_350035800 LTnewLM_35 AUGUSTUS CDS 1158644 1160323 1 - 0 ID=LTnewLM_350035800.1:CDS:1;Parent=LTnewLM_350035800.1 ### LTnewLM_35 . polypeptide 1158644 1160323 . - . ID=LTnewLM_350035800.1:pep;Derives_from=LTnewLM_350035800.1;orthologous_to=LmjF.35.2960_mRNA;ortholog_cluster=OG0005913;product=term%3DDENN (AEX-3) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02141 LTnewLM_35 Pfam protein_match 1159436 1159948 . - . Parent=LTnewLM_350035800.1:pep;Name=PF02141;signature_desc=DENN (AEX-3) domain ### LTnewLM_35 AUGUSTUS gene 1161558 1162703 1 - . ID=LTnewLM_350035900 LTnewLM_35 AUGUSTUS mRNA 1161558 1162703 1 - . ID=LTnewLM_350035900.1;Parent=LTnewLM_350035900 LTnewLM_35 AUGUSTUS CDS 1161558 1162703 1 - 0 ID=LTnewLM_350035900.1:CDS:1;Parent=LTnewLM_350035900.1 ### LTnewLM_35 . polypeptide 1161558 1162703 . - . ID=LTnewLM_350035900.1:pep;Derives_from=LTnewLM_350035900.1;orthologous_to=LmjF.35.2970_mRNA;ortholog_cluster=OG0005914;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1166906 1168342 1 - . ID=LTnewLM_350036000 LTnewLM_35 AUGUSTUS mRNA 1166906 1168342 1 - . ID=LTnewLM_350036000.1;Parent=LTnewLM_350036000 LTnewLM_35 AUGUSTUS CDS 1166906 1168342 1 - 0 ID=LTnewLM_350036000.1:CDS:1;Parent=LTnewLM_350036000.1 ### LTnewLM_35 . polypeptide 1166906 1168342 . - . ID=LTnewLM_350036000.1:pep;Derives_from=LTnewLM_350036000.1;orthologous_to=LmjF.35.2980_mRNA;ortholog_cluster=OG0005915;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_35 Pfam protein_match 1167170 1167832 . - . Parent=LTnewLM_350036000.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_35 Pfam protein_match 1167551 1167751 . - . Parent=LTnewLM_350036000.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 LTnewLM_35 Pfam protein_match 1168028 1168201 . - . Parent=LTnewLM_350036000.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_35 AUGUSTUS gene 1170767 1172005 1 - . ID=LTnewLM_350036100 LTnewLM_35 AUGUSTUS mRNA 1170767 1172005 1 - . ID=LTnewLM_350036100.1;Parent=LTnewLM_350036100 LTnewLM_35 AUGUSTUS CDS 1170767 1172005 1 - 0 ID=LTnewLM_350036100.1:CDS:1;Parent=LTnewLM_350036100.1 ### LTnewLM_35 . polypeptide 1170767 1172005 . - . ID=LTnewLM_350036100.1:pep;Derives_from=LTnewLM_350036100.1;orthologous_to=LmjF.35.2990_mRNA;ortholog_cluster=OG0005916;product=term%3D3'-5' exonuclease/Zinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01612|Pfam:PF00098;Ontology_term=GO:0006139,GO:0008270,GO:0003676,GO:0008408 LTnewLM_35 Pfam protein_match 1170917 1170964 . - . Parent=LTnewLM_350036100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_35 Pfam protein_match 1171208 1171759 . - . Parent=LTnewLM_350036100.1:pep;Name=PF01612;signature_desc=3'-5' exonuclease;Ontology_term=GO:0003676,GO:0008408,GO:0006139 ### LTnewLM_35 AUGUSTUS gene 1174173 1175555 1 - . ID=LTnewLM_350036200 LTnewLM_35 AUGUSTUS mRNA 1174173 1175555 1 - . ID=LTnewLM_350036200.1;Parent=LTnewLM_350036200 LTnewLM_35 AUGUSTUS CDS 1174173 1175555 1 - 0 ID=LTnewLM_350036200.1:CDS:1;Parent=LTnewLM_350036200.1 ### LTnewLM_35 . polypeptide 1174173 1175555 . - . ID=LTnewLM_350036200.1:pep;Derives_from=LTnewLM_350036200.1;orthologous_to=LmjF.35.3000_mRNA;ortholog_cluster=OG0005917;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1177292 1178038 0.55 - . ID=LTnewLM_350036300 LTnewLM_35 AUGUSTUS mRNA 1177292 1178038 0.55 - . ID=LTnewLM_350036300.1;Parent=LTnewLM_350036300 LTnewLM_35 AUGUSTUS CDS 1177292 1177534 0.58 - 0 ID=LTnewLM_350036300.1:CDS:1;Parent=LTnewLM_350036300.1 LTnewLM_35 AUGUSTUS CDS 1177922 1178038 0.55 - 0 ID=LTnewLM_350036300.1:CDS:2;Parent=LTnewLM_350036300.1 ### LTnewLM_35 . polypeptide 1177292 1178038 . - . ID=LTnewLM_350036300.1:pep;Derives_from=LTnewLM_350036300.1;product=term%3Dhypothetical protein ### LTnewLM_35 . polypeptide 1179340 1179765 . - . ID=LTnewLM_350036400.1:pep;Derives_from=LTnewLM_350036400.1;orthologous_to=LmjF.35.3010.2_mRNA;ortholog_cluster=OG0007667;product=term%3DGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00903|Pfam:PF13669 LTnewLM_35 Pfam protein_match 1179406 1179750 . - . Parent=LTnewLM_350036400.1:pep;Name=PF00903;signature_desc=Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LTnewLM_35 Pfam protein_match 1179451 1179744 . - . Parent=LTnewLM_350036400.1:pep;Name=PF13669;signature_desc=Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ### LTnewLM_35 . polypeptide 1179340 1180099 . - . ID=LTnewLM_350036400.2:pep;Derives_from=LTnewLM_350036400.2;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 1179340 1181131 . - . ID=LTnewLM_350036400:pseudogene;coverage=0.992;sequence_ID=0.888;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3010_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1179340 1179921 . - . ID=LTnewLM_350036400.1;Parent=LTnewLM_350036400:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1179340 1179765 . - . ID=LTnewLM_350036400.1:pseudogenic_exon:1;Parent=LTnewLM_350036400.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 1179340 1181131 . - . ID=LTnewLM_350036400.2;Parent=LTnewLM_350036400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1179340 1180099 . - . ID=LTnewLM_350036400.2:pseudogenic_exon:1;Parent=LTnewLM_350036400.2;extra_copy_number=0 ### LTnewLM_35 . pseudogene 1181353 1182744 . - . ID=LTnewLM_350036500:pseudogene;coverage=1.0;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3020_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1181353 1182744 . - . ID=LTnewLM_350036500.1;Parent=LTnewLM_350036500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1181353 1182744 . - . ID=LTnewLM_350036500.1:pseudogenic_exon:1;Parent=LTnewLM_350036500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1181353 1182744 . - . ID=LTnewLM_350036500.1:pep;Derives_from=LTnewLM_350036500.1;orthologous_to=LmjF.35.3020_mRNA;ortholog_cluster=OG0007668;product=term%3DPlatelet-activating factor acetylhydrolase%2C isoform II/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03403|Pfam:PF12697;Ontology_term=GO:0016042,GO:0003847 LTnewLM_35 Pfam protein_match 1181614 1182255 . - . Parent=LTnewLM_350036500.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_35 Pfam protein_match 1181680 1182531 . - . Parent=LTnewLM_350036500.1:pep;Name=PF03403;signature_desc=Platelet-activating factor acetylhydrolase%2C isoform II;Ontology_term=GO:0003847,GO:0016042 ### LTnewLM_35 AUGUSTUS gene 1183449 1184249 1 - . ID=LTnewLM_350036600 LTnewLM_35 AUGUSTUS mRNA 1183449 1184249 1 - . ID=LTnewLM_350036600.1;Parent=LTnewLM_350036600 LTnewLM_35 AUGUSTUS CDS 1183449 1184249 1 - 0 ID=LTnewLM_350036600.1:CDS:1;Parent=LTnewLM_350036600.1 ### LTnewLM_35 . polypeptide 1183449 1184249 . - . ID=LTnewLM_350036600.1:pep;Derives_from=LTnewLM_350036600.1;orthologous_to=LmjF.35.3030_mRNA;ortholog_cluster=OG0005918;product=term%3DIsoprenylcysteine carboxyl methyltransferase (ICMT) family/Phospholipid methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04140|Pfam:PF04191;Ontology_term=GO:0004671,GO:0006481,GO:0016021 LTnewLM_35 Pfam protein_match 1183521 1183790 . - . Parent=LTnewLM_350036600.1:pep;Name=PF04191;signature_desc=Phospholipid methyltransferase LTnewLM_35 Pfam protein_match 1183524 1183793 . - . Parent=LTnewLM_350036600.1:pep;Name=PF04140;signature_desc=Isoprenylcysteine carboxyl methyltransferase (ICMT) family;Ontology_term=GO:0004671,GO:0006481,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1185286 1186101 1 - . ID=LTnewLM_350036700 LTnewLM_35 AUGUSTUS mRNA 1185286 1186101 1 - . ID=LTnewLM_350036700.1;Parent=LTnewLM_350036700 LTnewLM_35 AUGUSTUS CDS 1185286 1186101 1 - 0 ID=LTnewLM_350036700.1:CDS:1;Parent=LTnewLM_350036700.1 ### LTnewLM_35 . polypeptide 1185286 1186101 . - . ID=LTnewLM_350036700.1:pep;Derives_from=LTnewLM_350036700.1;orthologous_to=LmjF.35.3040_mRNA;ortholog_cluster=OG0005919;product=term%3DNADH ubiquinone oxidoreductase subunit NDUFA12%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05071 LTnewLM_35 Pfam protein_match 1185604 1185801 . - . Parent=LTnewLM_350036700.1:pep;Name=PF05071;signature_desc=NADH ubiquinone oxidoreductase subunit NDUFA12 ### LTnewLM_35 AUGUSTUS gene 1187644 1188867 1 - . ID=LTnewLM_350036800 LTnewLM_35 AUGUSTUS mRNA 1187644 1188867 1 - . ID=LTnewLM_350036800.1;Parent=LTnewLM_350036800 LTnewLM_35 AUGUSTUS CDS 1187644 1188867 1 - 0 ID=LTnewLM_350036800.1:CDS:1;Parent=LTnewLM_350036800.1 ### LTnewLM_35 . polypeptide 1187644 1188867 . - . ID=LTnewLM_350036800.1:pep;Derives_from=LTnewLM_350036800.1;orthologous_to=LmjF.35.3050_mRNA;ortholog_cluster=OG0005920;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13696 LTnewLM_35 Pfam protein_match 1188241 1188297 . - . Parent=LTnewLM_350036800.1:pep;Name=PF13696;signature_desc=Zinc knuckle ### LTnewLM_35 AUGUSTUS gene 1192200 1195664 1 - . ID=LTnewLM_350036900 LTnewLM_35 AUGUSTUS mRNA 1192200 1195664 1 - . ID=LTnewLM_350036900.1;Parent=LTnewLM_350036900 LTnewLM_35 AUGUSTUS CDS 1192200 1195664 1 - 0 ID=LTnewLM_350036900.1:CDS:1;Parent=LTnewLM_350036900.1 ### LTnewLM_35 . polypeptide 1192200 1195664 . - . ID=LTnewLM_350036900.1:pep;Derives_from=LTnewLM_350036900.1;orthologous_to=LmjF.35.3060_mRNA;ortholog_cluster=OG0005921;product=term%3DThiF family/Ubiquitin-activating enzyme E1 four-helix bundle/Ubiquitin-activating enzyme%2C SCCH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899|Pfam:PF16191|Pfam:PF10585;Ontology_term=GO:0008641 LTnewLM_35 Pfam protein_match 1192698 1194254 . - . Parent=LTnewLM_350036900.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 LTnewLM_35 Pfam protein_match 1192839 1193696 . - . Parent=LTnewLM_350036900.1:pep;Name=PF10585;signature_desc=Ubiquitin-activating enzyme%2C SCCH domain LTnewLM_35 Pfam protein_match 1194327 1195607 . - . Parent=LTnewLM_350036900.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 LTnewLM_35 Pfam protein_match 1194600 1194803 . - . Parent=LTnewLM_350036900.1:pep;Name=PF16191;signature_desc=Ubiquitin-activating enzyme E1 four-helix bundle ### LTnewLM_35 AUGUSTUS gene 1197478 1199946 1 - . ID=LTnewLM_350037000 LTnewLM_35 AUGUSTUS mRNA 1197478 1199946 1 - . ID=LTnewLM_350037000.1;Parent=LTnewLM_350037000 LTnewLM_35 AUGUSTUS CDS 1197478 1199946 1 - 0 ID=LTnewLM_350037000.1:CDS:1;Parent=LTnewLM_350037000.1 ### LTnewLM_35 . polypeptide 1197478 1199946 . - . ID=LTnewLM_350037000.1:pep;Derives_from=LTnewLM_350037000.1;orthologous_to=LmjF.35.3070_mRNA;ortholog_cluster=OG0005922;product=term%3DLipocalin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17186 LTnewLM_35 Pfam protein_match 1198567 1198914 . - . Parent=LTnewLM_350037000.1:pep;Name=PF17186;signature_desc=Lipocalin-like domain ### LTnewLM_35 AUGUSTUS gene 1205805 1207343 1 - . ID=LTnewLM_350037100 LTnewLM_35 AUGUSTUS mRNA 1205805 1207343 1 - . ID=LTnewLM_350037100.1;Parent=LTnewLM_350037100 LTnewLM_35 AUGUSTUS CDS 1205805 1207343 1 - 0 ID=LTnewLM_350037100.1:CDS:1;Parent=LTnewLM_350037100.1 ### LTnewLM_35 . polypeptide 1205805 1207343 . - . ID=LTnewLM_350037100.1:pep;Derives_from=LTnewLM_350037100.1;orthologous_to=LmjF.35.3080_mRNA;ortholog_cluster=OG0005923;product=term%3DFGGY family of carbohydrate kinases%2C N-terminal domain/FGGY family of carbohydrate kinases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00370|Pfam:PF02782;Ontology_term=GO:0016773,GO:0005975 LTnewLM_35 Pfam protein_match 1205967 1206536 . - . Parent=LTnewLM_350037100.1:pep;Name=PF02782;signature_desc=FGGY family of carbohydrate kinases%2C C-terminal domain;Ontology_term=GO:0016773,GO:0005975 LTnewLM_35 Pfam protein_match 1206564 1207337 . - . Parent=LTnewLM_350037100.1:pep;Name=PF00370;signature_desc=FGGY family of carbohydrate kinases%2C N-terminal domain;Ontology_term=GO:0016773,GO:0005975 ### LTnewLM_35 . pseudogene 1210675 1212236 . - . ID=LTnewLM_350037200:pseudogene;coverage=0.995;sequence_ID=0.909;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3090_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1210675 1212236 . - . ID=LTnewLM_350037200.1;Parent=LTnewLM_350037200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1210675 1212236 . - . ID=LTnewLM_350037200.1:pseudogenic_exon:1;Parent=LTnewLM_350037200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1210675 1212236 . - . ID=LTnewLM_350037200.1:pep;Derives_from=LTnewLM_350037200.1;orthologous_to=LmjF.35.3090_mRNA;ortholog_cluster=OG0007669;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1216779 1219541 1 - . ID=LTnewLM_350037300 LTnewLM_35 AUGUSTUS mRNA 1216779 1219541 1 - . ID=LTnewLM_350037300.1;Parent=LTnewLM_350037300 LTnewLM_35 AUGUSTUS CDS 1216779 1219541 1 - 0 ID=LTnewLM_350037300.1:CDS:1;Parent=LTnewLM_350037300.1 ### LTnewLM_35 . polypeptide 1216779 1219541 . - . ID=LTnewLM_350037300.1:pep;Derives_from=LTnewLM_350037300.1;orthologous_to=LmjF.35.3100_mRNA;ortholog_cluster=OG0005924;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 1217109 1217438 . - . Parent=LTnewLM_350037300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_35 Pfam protein_match 1217553 1218068 . - . Parent=LTnewLM_350037300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_35 AUGUSTUS gene 1221174 1222982 1 - . ID=LTnewLM_350037400 LTnewLM_35 AUGUSTUS mRNA 1221174 1222982 1 - . ID=LTnewLM_350037400.1;Parent=LTnewLM_350037400 LTnewLM_35 AUGUSTUS CDS 1221174 1222982 1 - 0 ID=LTnewLM_350037400.1:CDS:1;Parent=LTnewLM_350037400.1 ### LTnewLM_35 . polypeptide 1221174 1222982 . - . ID=LTnewLM_350037400.1:pep;Derives_from=LTnewLM_350037400.1;orthologous_to=LmjF.35.3110_mRNA;ortholog_cluster=OG0005925;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 1225534 1230417 . - . ID=LTnewLM_350037500.1:pep;Derives_from=LTnewLM_350037500.1;orthologous_to=LTnewLM_350037500.2,LmjF.35.3120_mRNA;ortholog_cluster=OG0000471;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1225534 1230834 2 - . ID=LTnewLM_350037500 LTnewLM_35 AUGUSTUS mRNA 1225534 1230417 1 - . ID=LTnewLM_350037500.1;Parent=LTnewLM_350037500 LTnewLM_35 AUGUSTUS CDS 1225534 1230417 1 - 0 ID=LTnewLM_350037500.1:CDS:1;Parent=LTnewLM_350037500.1 LTnewLM_35 AUGUSTUS mRNA 1225534 1230834 1 - . ID=LTnewLM_350037500.2;Parent=LTnewLM_350037500 LTnewLM_35 AUGUSTUS CDS 1225534 1230834 1 - 0 ID=LTnewLM_350037500.2:CDS:1;Parent=LTnewLM_350037500.2 ### LTnewLM_35 . polypeptide 1225534 1230834 . - . ID=LTnewLM_350037500.2:pep;Derives_from=LTnewLM_350037500.2;orthologous_to=LTnewLM_350037500.1,LmjF.35.3120_mRNA;ortholog_cluster=OG0000471;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1231655 1232176 1 - . ID=LTnewLM_350037600 LTnewLM_35 AUGUSTUS mRNA 1231655 1232176 1 - . ID=LTnewLM_350037600.1;Parent=LTnewLM_350037600 LTnewLM_35 AUGUSTUS CDS 1231655 1232176 1 - 0 ID=LTnewLM_350037600.1:CDS:1;Parent=LTnewLM_350037600.1 ### LTnewLM_35 . polypeptide 1231655 1232176 . - . ID=LTnewLM_350037600.1:pep;Derives_from=LTnewLM_350037600.1;orthologous_to=LmjF.35.3130_mRNA;ortholog_cluster=OG0005926;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_35 Pfam protein_match 1231667 1231831 . - . Parent=LTnewLM_350037600.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_35 AUGUSTUS gene 1234049 1235179 1 - . ID=LTnewLM_350037700 LTnewLM_35 AUGUSTUS mRNA 1234049 1235179 1 - . ID=LTnewLM_350037700.1;Parent=LTnewLM_350037700 LTnewLM_35 AUGUSTUS CDS 1234049 1235179 1 - 0 ID=LTnewLM_350037700.1:CDS:1;Parent=LTnewLM_350037700.1 ### LTnewLM_35 . polypeptide 1234049 1235179 . - . ID=LTnewLM_350037700.1:pep;Derives_from=LTnewLM_350037700.1;orthologous_to=LmjF.35.3140_mRNA;ortholog_cluster=OG0005927;product=term%3DInositol polyphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03770;Ontology_term=GO:0008440 LTnewLM_35 Pfam protein_match 1234061 1234708 . - . Parent=LTnewLM_350037700.1:pep;Name=PF03770;signature_desc=Inositol polyphosphate kinase;Ontology_term=GO:0008440 ### LTnewLM_35 AUGUSTUS gene 1236168 1237712 1 - . ID=LTnewLM_350037800 LTnewLM_35 AUGUSTUS mRNA 1236168 1237712 1 - . ID=LTnewLM_350037800.1;Parent=LTnewLM_350037800 LTnewLM_35 AUGUSTUS CDS 1236168 1237712 1 - 0 ID=LTnewLM_350037800.1:CDS:1;Parent=LTnewLM_350037800.1 ### LTnewLM_35 . polypeptide 1236168 1237712 . - . ID=LTnewLM_350037800.1:pep;Derives_from=LTnewLM_350037800.1;orthologous_to=LmjF.35.3150_mRNA;ortholog_cluster=OG0005928;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1238355 1239161 1 - . ID=LTnewLM_350037900 LTnewLM_35 AUGUSTUS mRNA 1238355 1239161 1 - . ID=LTnewLM_350037900.1;Parent=LTnewLM_350037900 LTnewLM_35 AUGUSTUS CDS 1238355 1239161 1 - 0 ID=LTnewLM_350037900.1:CDS:1;Parent=LTnewLM_350037900.1 ### LTnewLM_35 . polypeptide 1238355 1239161 . - . ID=LTnewLM_350037900.1:pep;Derives_from=LTnewLM_350037900.1;product=term%3Dhypothetical protein ### LTnewLM_35 . polypeptide 1240024 1240575 . - . ID=LTnewLM_350038000.1:pep;Derives_from=LTnewLM_350038000.1;orthologous_to=LmjF.35.3160.2_mRNA;ortholog_cluster=OG0007670;product=term%3DRiboflavin kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01687;Ontology_term=GO:0009231,GO:0008531 LTnewLM_35 Pfam protein_match 1240147 1240572 . - . Parent=LTnewLM_350038000.1:pep;Name=PF01687;signature_desc=Riboflavin kinase;Ontology_term=GO:0008531,GO:0009231 ### LTnewLM_35 . polypeptide 1240024 1240955 . - . ID=LTnewLM_350038000.2:pep;Derives_from=LTnewLM_350038000.2;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 1240024 1241576 . - . ID=LTnewLM_350038000:pseudogene;coverage=0.989;sequence_ID=0.907;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3160_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1240024 1240689 . - . ID=LTnewLM_350038000.1;Parent=LTnewLM_350038000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1240024 1240575 . - . ID=LTnewLM_350038000.1:pseudogenic_exon:1;Parent=LTnewLM_350038000.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 1240024 1241576 . - . ID=LTnewLM_350038000.2;Parent=LTnewLM_350038000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1240024 1240955 . - . ID=LTnewLM_350038000.2:pseudogenic_exon:1;Parent=LTnewLM_350038000.2;extra_copy_number=0 ### LTnewLM_35 AUGUSTUS gene 1242972 1248599 1 - . ID=LTnewLM_350038100 LTnewLM_35 AUGUSTUS mRNA 1242972 1248599 1 - . ID=LTnewLM_350038100.1;Parent=LTnewLM_350038100 LTnewLM_35 AUGUSTUS CDS 1242972 1248599 1 - 0 ID=LTnewLM_350038100.1:CDS:1;Parent=LTnewLM_350038100.1 ### LTnewLM_35 . polypeptide 1242972 1248599 . - . ID=LTnewLM_350038100.1:pep;Derives_from=LTnewLM_350038100.1;orthologous_to=LmjF.35.3170_mRNA;ortholog_cluster=OG0005929;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF17667;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 1242987 1243805 . - . Parent=LTnewLM_350038100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1243419 1243778 . - . Parent=LTnewLM_350038100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 1243422 1243547 . - . Parent=LTnewLM_350038100.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_35 . pseudogene 1253181 1254220 . - . ID=LTnewLM_350038200:pseudogene;coverage=0.998;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3180_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1253181 1254220 . - . ID=LTnewLM_350038200.1;Parent=LTnewLM_350038200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1253181 1254220 . - . ID=LTnewLM_350038200.1:pseudogenic_exon:1;Parent=LTnewLM_350038200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1253181 1254220 . - . ID=LTnewLM_350038200.1:pep;Derives_from=LTnewLM_350038200.1;orthologous_to=LmjF.35.3180_mRNA;ortholog_cluster=OG0007671;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1256533 1259226 1 - . ID=LTnewLM_350038300 LTnewLM_35 AUGUSTUS mRNA 1256533 1259226 1 - . ID=LTnewLM_350038300.1;Parent=LTnewLM_350038300 LTnewLM_35 AUGUSTUS CDS 1256533 1259226 1 - 0 ID=LTnewLM_350038300.1:CDS:1;Parent=LTnewLM_350038300.1 ### LTnewLM_35 . polypeptide 1256533 1259226 . - . ID=LTnewLM_350038300.1:pep;Derives_from=LTnewLM_350038300.1;orthologous_to=LmjF.35.3190_mRNA;ortholog_cluster=OG0005930;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_35 Pfam protein_match 1258801 1259178 . - . Parent=LTnewLM_350038300.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_35 AUGUSTUS gene 1261133 1263247 1 - . ID=LTnewLM_350038400 LTnewLM_35 AUGUSTUS mRNA 1261133 1263247 1 - . ID=LTnewLM_350038400.1;Parent=LTnewLM_350038400 LTnewLM_35 AUGUSTUS CDS 1261133 1263247 1 - 0 ID=LTnewLM_350038400.1:CDS:1;Parent=LTnewLM_350038400.1 ### LTnewLM_35 . polypeptide 1261133 1263247 . - . ID=LTnewLM_350038400.1:pep;Derives_from=LTnewLM_350038400.1;orthologous_to=LmjF.35.3200_mRNA;ortholog_cluster=OG0005931;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1262114 1262314 . - . Parent=LTnewLM_350038400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_35 AUGUSTUS gene 1266445 1268439 1 - . ID=LTnewLM_350038500 LTnewLM_35 AUGUSTUS mRNA 1266445 1268439 1 - . ID=LTnewLM_350038500.1;Parent=LTnewLM_350038500 LTnewLM_35 AUGUSTUS CDS 1266445 1268439 1 - 0 ID=LTnewLM_350038500.1:CDS:1;Parent=LTnewLM_350038500.1 ### LTnewLM_35 . polypeptide 1266445 1268439 . - . ID=LTnewLM_350038500.1:pep;Derives_from=LTnewLM_350038500.1;orthologous_to=LmjF.35.3210_mRNA;ortholog_cluster=OG0005932;product=term%3DEF-hand domain/EF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17958|Pfam:PF13499 LTnewLM_35 Pfam protein_match 1266769 1267068 . - . Parent=LTnewLM_350038500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_35 Pfam protein_match 1267117 1267365 . - . Parent=LTnewLM_350038500.1:pep;Name=PF17958;signature_desc=EF-hand domain ### LTnewLM_35 AUGUSTUS gene 1270401 1270913 1 - . ID=LTnewLM_350038600 LTnewLM_35 AUGUSTUS mRNA 1270401 1270913 1 - . ID=LTnewLM_350038600.1;Parent=LTnewLM_350038600 LTnewLM_35 AUGUSTUS CDS 1270401 1270913 1 - 0 ID=LTnewLM_350038600.1:CDS:1;Parent=LTnewLM_350038600.1 ### LTnewLM_35 . polypeptide 1270401 1270913 . - . ID=LTnewLM_350038600.1:pep;Derives_from=LTnewLM_350038600.1;orthologous_to=LmjF.35.3220_mRNA;ortholog_cluster=OG0005933;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1273506 1274735 1 - . ID=LTnewLM_350038700 LTnewLM_35 AUGUSTUS mRNA 1273506 1274735 1 - . ID=LTnewLM_350038700.1;Parent=LTnewLM_350038700 LTnewLM_35 AUGUSTUS CDS 1273506 1274735 1 - 0 ID=LTnewLM_350038700.1:CDS:1;Parent=LTnewLM_350038700.1 ### LTnewLM_35 . polypeptide 1273506 1274735 . - . ID=LTnewLM_350038700.1:pep;Derives_from=LTnewLM_350038700.1;orthologous_to=LmjF.35.3230_mRNA;ortholog_cluster=OG0005934;product=term%3DCys/Met metabolism PLP-dependent enzyme/DegT/DnrJ/EryC1/StrS aminotransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01053|Pfam:PF01041;Ontology_term=GO:0030170 LTnewLM_35 Pfam protein_match 1273524 1274660 . - . Parent=LTnewLM_350038700.1:pep;Name=PF01053;signature_desc=Cys/Met metabolism PLP-dependent enzyme;Ontology_term=GO:0030170 LTnewLM_35 Pfam protein_match 1273992 1274519 . - . Parent=LTnewLM_350038700.1:pep;Name=PF01041;signature_desc=DegT/DnrJ/EryC1/StrS aminotransferase family ### LTnewLM_35 AUGUSTUS gene 1277642 1280524 1 - . ID=LTnewLM_350038800 LTnewLM_35 AUGUSTUS mRNA 1277642 1280524 1 - . ID=LTnewLM_350038800.1;Parent=LTnewLM_350038800 LTnewLM_35 AUGUSTUS CDS 1277642 1280524 1 - 0 ID=LTnewLM_350038800.1:CDS:1;Parent=LTnewLM_350038800.1 ### LTnewLM_35 . polypeptide 1277642 1280524 . - . ID=LTnewLM_350038800.1:pep;Derives_from=LTnewLM_350038800.1;orthologous_to=LmjF.35.3240_mRNA;ortholog_cluster=OG0005935;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1281408 1282502 1 - . ID=LTnewLM_350038900 LTnewLM_35 AUGUSTUS mRNA 1281408 1282502 1 - . ID=LTnewLM_350038900.1;Parent=LTnewLM_350038900 LTnewLM_35 AUGUSTUS CDS 1281408 1282502 1 - 0 ID=LTnewLM_350038900.1:CDS:1;Parent=LTnewLM_350038900.1 ### LTnewLM_35 . polypeptide 1281408 1282502 . - . ID=LTnewLM_350038900.1:pep;Derives_from=LTnewLM_350038900.1;orthologous_to=LmjF.35.3250_mRNA;ortholog_cluster=OG0005936;product=term%3DRad17 P-loop domain/DNA polymerase III%2C delta subunit/AAA domain/Magnesium chelatase%2C subunit ChlI/AAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/Replication factor C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03215|Pfam:PF13177|Pfam:PF13604|Pfam:PF01078|Pfam:PF07728|Pfam:PF00004|Pfam:PF08542;Ontology_term=GO:0015995,GO:0005524,GO:0016887,GO:0015979,GO:0016851 LTnewLM_35 Pfam protein_match 1281486 1281740 . - . Parent=LTnewLM_350038900.1:pep;Name=PF08542;signature_desc=Replication factor C C-terminal domain LTnewLM_35 Pfam protein_match 1281936 1282400 . - . Parent=LTnewLM_350038900.1:pep;Name=PF13177;signature_desc=DNA polymerase III%2C delta subunit LTnewLM_35 Pfam protein_match 1281945 1282346 . - . Parent=LTnewLM_350038900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_35 Pfam protein_match 1282014 1282382 . - . Parent=LTnewLM_350038900.1:pep;Name=PF13604;signature_desc=AAA domain LTnewLM_35 Pfam protein_match 1282014 1282451 . - . Parent=LTnewLM_350038900.1:pep;Name=PF03215;signature_desc=Rad17 P-loop domain LTnewLM_35 Pfam protein_match 1282026 1282349 . - . Parent=LTnewLM_350038900.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_35 Pfam protein_match 1282032 1282349 . - . Parent=LTnewLM_350038900.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 ### LTnewLM_35 AUGUSTUS gene 1283922 1284851 1 - . ID=LTnewLM_350039000 LTnewLM_35 AUGUSTUS mRNA 1283922 1284851 1 - . ID=LTnewLM_350039000.1;Parent=LTnewLM_350039000 LTnewLM_35 AUGUSTUS CDS 1283922 1284851 1 - 0 ID=LTnewLM_350039000.1:CDS:1;Parent=LTnewLM_350039000.1 ### LTnewLM_35 . polypeptide 1283922 1284851 . - . ID=LTnewLM_350039000.1:pep;Derives_from=LTnewLM_350039000.1;orthologous_to=LmjF.35.3260_mRNA;ortholog_cluster=OG0005937;product=term%3DPex19 protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04614;Ontology_term=GO:0005777 LTnewLM_35 Pfam protein_match 1283946 1284197 . - . Parent=LTnewLM_350039000.1:pep;Name=PF04614;signature_desc=Pex19 protein family;Ontology_term=GO:0005777 ### LTnewLM_35 AUGUSTUS gene 1285765 1286331 1 - . ID=LTnewLM_350039100 LTnewLM_35 AUGUSTUS mRNA 1285765 1286331 1 - . ID=LTnewLM_350039100.1;Parent=LTnewLM_350039100 LTnewLM_35 AUGUSTUS CDS 1285765 1286331 1 - 0 ID=LTnewLM_350039100.1:CDS:1;Parent=LTnewLM_350039100.1 ### LTnewLM_35 . polypeptide 1285765 1286331 . - . ID=LTnewLM_350039100.1:pep;Derives_from=LTnewLM_350039100.1;orthologous_to=LmjF.35.3270_mRNA;ortholog_cluster=OG0005938;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1287190 1287879 1 - . ID=LTnewLM_350039200 LTnewLM_35 AUGUSTUS mRNA 1287190 1287879 1 - . ID=LTnewLM_350039200.1;Parent=LTnewLM_350039200 LTnewLM_35 AUGUSTUS CDS 1287190 1287879 1 - 0 ID=LTnewLM_350039200.1:CDS:1;Parent=LTnewLM_350039200.1 ### LTnewLM_35 . polypeptide 1287190 1287879 . - . ID=LTnewLM_350039200.1:pep;Derives_from=LTnewLM_350039200.1;orthologous_to=LTnewLM_350039300.1,LmjF.35.3280_mRNA,LmjF.35.3290_mRNA;ortholog_cluster=OG0000249;product=term%3DRibosomal protein L31e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01198;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 1287274 1287510 . - . Parent=LTnewLM_350039200.1:pep;Name=PF01198;signature_desc=Ribosomal protein L31e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1288693 1289259 1 - . ID=LTnewLM_350039300 LTnewLM_35 AUGUSTUS mRNA 1288693 1289259 1 - . ID=LTnewLM_350039300.1;Parent=LTnewLM_350039300 LTnewLM_35 AUGUSTUS CDS 1288693 1289259 1 - 0 ID=LTnewLM_350039300.1:CDS:1;Parent=LTnewLM_350039300.1 ### LTnewLM_35 . polypeptide 1288693 1289259 . - . ID=LTnewLM_350039300.1:pep;Derives_from=LTnewLM_350039300.1;orthologous_to=LTnewLM_350039200.1,LmjF.35.3280_mRNA,LmjF.35.3290_mRNA;ortholog_cluster=OG0000249;product=term%3DRibosomal protein L31e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01198;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 1288777 1289013 . - . Parent=LTnewLM_350039300.1:pep;Name=PF01198;signature_desc=Ribosomal protein L31e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1289941 1291845 1 - . ID=LTnewLM_350039400 LTnewLM_35 AUGUSTUS mRNA 1289941 1291845 1 - . ID=LTnewLM_350039400.1;Parent=LTnewLM_350039400 LTnewLM_35 AUGUSTUS CDS 1289941 1291845 1 - 0 ID=LTnewLM_350039400.1:CDS:1;Parent=LTnewLM_350039400.1 ### LTnewLM_35 . polypeptide 1289941 1291845 . - . ID=LTnewLM_350039400.1:pep;Derives_from=LTnewLM_350039400.1;orthologous_to=LmjF.35.3300_mRNA;ortholog_cluster=OG0005939;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1293852 1294763 1 - . ID=LTnewLM_350039500 LTnewLM_35 AUGUSTUS mRNA 1293852 1294763 1 - . ID=LTnewLM_350039500.1;Parent=LTnewLM_350039500 LTnewLM_35 AUGUSTUS CDS 1293852 1294763 1 - 0 ID=LTnewLM_350039500.1:CDS:1;Parent=LTnewLM_350039500.1 ### LTnewLM_35 . polypeptide 1293852 1294763 . - . ID=LTnewLM_350039500.1:pep;Derives_from=LTnewLM_350039500.1;orthologous_to=LmjF.35.3310_mRNA;ortholog_cluster=OG0005940;product=term%3DLeucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580 LTnewLM_35 Pfam protein_match 1294353 1294577 . - . Parent=LTnewLM_350039500.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_35 AUGUSTUS gene 1295958 1296587 1 - . ID=LTnewLM_350039600 LTnewLM_35 AUGUSTUS mRNA 1295958 1296587 1 - . ID=LTnewLM_350039600.1;Parent=LTnewLM_350039600 LTnewLM_35 AUGUSTUS CDS 1295958 1296587 1 - 0 ID=LTnewLM_350039600.1:CDS:1;Parent=LTnewLM_350039600.1 ### LTnewLM_35 . polypeptide 1295958 1296587 . - . ID=LTnewLM_350039600.1:pep;Derives_from=LTnewLM_350039600.1;orthologous_to=LmjF.35.3320_mRNA;ortholog_cluster=OG0005941;product=term%3DTransport protein particle (TRAPP) component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04051 LTnewLM_35 Pfam protein_match 1296003 1296485 . - . Parent=LTnewLM_350039600.1:pep;Name=PF04051;signature_desc=Transport protein particle (TRAPP) component ### LTnewLM_35 AUGUSTUS gene 1302548 1303636 1 - . ID=LTnewLM_350039700 LTnewLM_35 AUGUSTUS mRNA 1302548 1303636 1 - . ID=LTnewLM_350039700.1;Parent=LTnewLM_350039700 LTnewLM_35 AUGUSTUS CDS 1302548 1303636 1 - 0 ID=LTnewLM_350039700.1:CDS:1;Parent=LTnewLM_350039700.1 ### LTnewLM_35 . polypeptide 1302548 1303636 . - . ID=LTnewLM_350039700.1:pep;Derives_from=LTnewLM_350039700.1;orthologous_to=LmjF.35.3330_mRNA;ortholog_cluster=OG0005942;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_35 Pfam protein_match 1302719 1302970 . - . Parent=LTnewLM_350039700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_35 Pfam protein_match 1302986 1303261 . - . Parent=LTnewLM_350039700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_35 Pfam protein_match 1303319 1303576 . - . Parent=LTnewLM_350039700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_35 AUGUSTUS gene 1308338 1309777 1 - . ID=LTnewLM_350039800 LTnewLM_35 AUGUSTUS mRNA 1308338 1309777 1 - . ID=LTnewLM_350039800.1;Parent=LTnewLM_350039800 LTnewLM_35 AUGUSTUS CDS 1308338 1309777 1 - 0 ID=LTnewLM_350039800.1:CDS:1;Parent=LTnewLM_350039800.1 ### LTnewLM_35 . polypeptide 1308338 1309777 . - . ID=LTnewLM_350039800.1:pep;Derives_from=LTnewLM_350039800.1;orthologous_to=LmjF.35.3340_mRNA;ortholog_cluster=OG0005943;product=term%3D3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain/NADP oxidoreductase coenzyme F420-dependent/NAD binding domain of 6-phosphogluconate dehydrogenase/6-phosphogluconate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02737|Pfam:PF03807|Pfam:PF03446|Pfam:PF00393;Ontology_term=GO:0016491,GO:0050661,GO:0006631,GO:0055114,GO:0003857,GO:0004616,GO:0006098 LTnewLM_35 Pfam protein_match 1308356 1309234 . - . Parent=LTnewLM_350039800.1:pep;Name=PF00393;signature_desc=6-phosphogluconate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0004616,GO:0050661,GO:0006098,GO:0055114 LTnewLM_35 Pfam protein_match 1309286 1309765 . - . Parent=LTnewLM_350039800.1:pep;Name=PF03446;signature_desc=NAD binding domain of 6-phosphogluconate dehydrogenase;Ontology_term=GO:0004616,GO:0006098,GO:0055114 LTnewLM_35 Pfam protein_match 1309466 1309765 . - . Parent=LTnewLM_350039800.1:pep;Name=PF03807;signature_desc=NADP oxidoreductase coenzyme F420-dependent LTnewLM_35 Pfam protein_match 1309616 1309765 . - . Parent=LTnewLM_350039800.1:pep;Name=PF02737;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 1310948 1312336 1 - . ID=LTnewLM_350039900 LTnewLM_35 AUGUSTUS mRNA 1310948 1312336 1 - . ID=LTnewLM_350039900.1;Parent=LTnewLM_350039900 LTnewLM_35 AUGUSTUS CDS 1310948 1312336 1 - 0 ID=LTnewLM_350039900.1:CDS:1;Parent=LTnewLM_350039900.1 ### LTnewLM_35 . polypeptide 1310948 1312336 . - . ID=LTnewLM_350039900.1:pep;Derives_from=LTnewLM_350039900.1;orthologous_to=LmjF.35.3350_mRNA;ortholog_cluster=OG0005944;product=term%3DTetrapyrrole (Corrin/Porphyrin) Methylases%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00590;Ontology_term=GO:0008152,GO:0008168 LTnewLM_35 Pfam protein_match 1311383 1312063 . - . Parent=LTnewLM_350039900.1:pep;Name=PF00590;signature_desc=Tetrapyrrole (Corrin/Porphyrin) Methylases;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_35 AUGUSTUS gene 1313116 1320009 1 - . ID=LTnewLM_350040000 LTnewLM_35 AUGUSTUS mRNA 1313116 1320009 1 - . ID=LTnewLM_350040000.1;Parent=LTnewLM_350040000 LTnewLM_35 AUGUSTUS CDS 1313116 1320009 1 - 0 ID=LTnewLM_350040000.1:CDS:1;Parent=LTnewLM_350040000.1 ### LTnewLM_35 . polypeptide 1313116 1320009 . - . ID=LTnewLM_350040000.1:pep;Derives_from=LTnewLM_350040000.1;orthologous_to=LmjF.35.3360_mRNA;ortholog_cluster=OG0005945;product=term%3DTHADA/TRM732%2C DUF2428%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10350 LTnewLM_35 Pfam protein_match 1315285 1316082 . - . Parent=LTnewLM_350040000.1:pep;Name=PF10350;signature_desc=THADA/TRM732%2C DUF2428 ### LTnewLM_35 AUGUSTUS gene 1322685 1325939 1 - . ID=LTnewLM_350040100 LTnewLM_35 AUGUSTUS mRNA 1322685 1325939 1 - . ID=LTnewLM_350040100.1;Parent=LTnewLM_350040100 LTnewLM_35 AUGUSTUS CDS 1322685 1325939 1 - 0 ID=LTnewLM_350040100.1:CDS:1;Parent=LTnewLM_350040100.1 ### LTnewLM_35 . polypeptide 1322685 1325939 . - . ID=LTnewLM_350040100.1:pep;Derives_from=LTnewLM_350040100.1;orthologous_to=LmjF.35.3370_mRNA;ortholog_cluster=OG0005946;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1326877 1328520 1 - . ID=LTnewLM_350040200 LTnewLM_35 AUGUSTUS mRNA 1326877 1328520 1 - . ID=LTnewLM_350040200.1;Parent=LTnewLM_350040200 LTnewLM_35 AUGUSTUS CDS 1326877 1328520 1 - 0 ID=LTnewLM_350040200.1:CDS:1;Parent=LTnewLM_350040200.1 ### LTnewLM_35 . polypeptide 1326877 1328520 . - . ID=LTnewLM_350040200.1:pep;Derives_from=LTnewLM_350040200.1;orthologous_to=LmjF.35.3380_mRNA;ortholog_cluster=OG0005947;product=term%3DPoly A polymerase regulatory subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01358 LTnewLM_35 Pfam protein_match 1328053 1328331 . - . Parent=LTnewLM_350040200.1:pep;Name=PF01358;signature_desc=Poly A polymerase regulatory subunit ### LTnewLM_35 AUGUSTUS gene 1329348 1330136 1 - . ID=LTnewLM_350040300 LTnewLM_35 AUGUSTUS mRNA 1329348 1330136 1 - . ID=LTnewLM_350040300.1;Parent=LTnewLM_350040300 LTnewLM_35 AUGUSTUS CDS 1329348 1330136 1 - 0 ID=LTnewLM_350040300.1:CDS:1;Parent=LTnewLM_350040300.1 ### LTnewLM_35 . polypeptide 1329348 1330136 . - . ID=LTnewLM_350040300.1:pep;Derives_from=LTnewLM_350040300.1;orthologous_to=LmjF.35.3390_mRNA;ortholog_cluster=OG0005948;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1331014 1332279 1 - . ID=LTnewLM_350040400 LTnewLM_35 AUGUSTUS mRNA 1331014 1332279 1 - . ID=LTnewLM_350040400.1;Parent=LTnewLM_350040400 LTnewLM_35 AUGUSTUS CDS 1331014 1332279 1 - 0 ID=LTnewLM_350040400.1:CDS:1;Parent=LTnewLM_350040400.1 ### LTnewLM_35 . polypeptide 1331014 1332279 . - . ID=LTnewLM_350040400.1:pep;Derives_from=LTnewLM_350040400.1;orthologous_to=LmjF.35.3400_mRNA;ortholog_cluster=OG0005949;product=term%3DLEM3 (ligand-effect modulator 3) family / CDC50 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03381;Ontology_term=GO:0016020 LTnewLM_35 Pfam protein_match 1331065 1332120 . - . Parent=LTnewLM_350040400.1:pep;Name=PF03381;signature_desc=LEM3 (ligand-effect modulator 3) family / CDC50 family;Ontology_term=GO:0016020 ### LTnewLM_35 AUGUSTUS gene 1333410 1335440 1 - . ID=LTnewLM_350040500 LTnewLM_35 AUGUSTUS mRNA 1333410 1335440 1 - . ID=LTnewLM_350040500.1;Parent=LTnewLM_350040500 LTnewLM_35 AUGUSTUS CDS 1333410 1335440 1 - 0 ID=LTnewLM_350040500.1:CDS:1;Parent=LTnewLM_350040500.1 ### LTnewLM_35 . polypeptide 1333410 1335440 . - . ID=LTnewLM_350040500.1:pep;Derives_from=LTnewLM_350040500.1;orthologous_to=LmjF.35.3410_mRNA;ortholog_cluster=OG0005950;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1336101 1336679 . - . ID=LTnewLM_350040600;coverage=1.0;sequence_ID=0.948;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3420_0 LTnewLM_35 Liftoff mRNA 1336101 1336679 . - . ID=LTnewLM_350040600.1;Parent=LTnewLM_350040600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1336101 1336679 . - 0 ID=LTnewLM_350040600.1:CDS:1;Parent=LTnewLM_350040600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1336101 1336679 . - . ID=LTnewLM_350040600.1:pep;Derives_from=LTnewLM_350040600.1;orthologous_to=LmjF.35.3420_mRNA;ortholog_cluster=OG0005951;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1337433 1339193 1 - . ID=LTnewLM_350040700 LTnewLM_35 AUGUSTUS mRNA 1337433 1339193 1 - . ID=LTnewLM_350040700.1;Parent=LTnewLM_350040700 LTnewLM_35 AUGUSTUS CDS 1337433 1339193 1 - 0 ID=LTnewLM_350040700.1:CDS:1;Parent=LTnewLM_350040700.1 ### LTnewLM_35 . polypeptide 1337433 1339193 . - . ID=LTnewLM_350040700.1:pep;Derives_from=LTnewLM_350040700.1;orthologous_to=LmjF.35.3430_mRNA;ortholog_cluster=OG0005952;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1340592 1340945 1 - . ID=LTnewLM_350040800 LTnewLM_35 AUGUSTUS mRNA 1340592 1340945 1 - . ID=LTnewLM_350040800.1;Parent=LTnewLM_350040800 LTnewLM_35 AUGUSTUS CDS 1340592 1340945 1 - 0 ID=LTnewLM_350040800.1:CDS:1;Parent=LTnewLM_350040800.1 ### LTnewLM_35 . polypeptide 1340592 1340945 . - . ID=LTnewLM_350040800.1:pep;Derives_from=LTnewLM_350040800.1;orthologous_to=LmjF.35.3440_mRNA;ortholog_cluster=OG0005953;product=term%3DReplication factor A protein 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08661;Ontology_term=GO:0005634,GO:0006310,GO:0006281,GO:0006260,GO:0003677 LTnewLM_35 Pfam protein_match 1340598 1340885 . - . Parent=LTnewLM_350040800.1:pep;Name=PF08661;signature_desc=Replication factor A protein 3;Ontology_term=GO:0003677,GO:0006260,GO:0006281,GO:0006310,GO:0005634 ### LTnewLM_35 AUGUSTUS gene 1342369 1345026 1 - . ID=LTnewLM_350040900 LTnewLM_35 AUGUSTUS mRNA 1342369 1345026 1 - . ID=LTnewLM_350040900.1;Parent=LTnewLM_350040900 LTnewLM_35 AUGUSTUS CDS 1342369 1345026 1 - 0 ID=LTnewLM_350040900.1:CDS:1;Parent=LTnewLM_350040900.1 ### LTnewLM_35 . polypeptide 1342369 1345026 . - . ID=LTnewLM_350040900.1:pep;Derives_from=LTnewLM_350040900.1;orthologous_to=LmjF.35.3450_mRNA;ortholog_cluster=OG0005954;product=term%3DRad4 transglutaminase-like domain/Rad4 beta-hairpin domain 1/Rad4 beta-hairpin domain 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03835|Pfam:PF10403|Pfam:PF10405;Ontology_term=GO:0006289,GO:0003677,GO:0005634,GO:0003684 LTnewLM_35 Pfam protein_match 1342537 1342770 . - . Parent=LTnewLM_350040900.1:pep;Name=PF10405;signature_desc=Rad4 beta-hairpin domain 3;Ontology_term=GO:0003677 LTnewLM_35 Pfam protein_match 1342960 1343109 . - . Parent=LTnewLM_350040900.1:pep;Name=PF10403;signature_desc=Rad4 beta-hairpin domain 1;Ontology_term=GO:0003677 LTnewLM_35 Pfam protein_match 1343128 1343565 . - . Parent=LTnewLM_350040900.1:pep;Name=PF03835;signature_desc=Rad4 transglutaminase-like domain;Ontology_term=GO:0003684,GO:0006289,GO:0005634 ### LTnewLM_35 Liftoff gene 1345853 1347265 . - . ID=LTnewLM_350041000;coverage=1.0;sequence_ID=0.951;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3460_0 LTnewLM_35 Liftoff mRNA 1345853 1347265 . - . ID=LTnewLM_350041000.1;Parent=LTnewLM_350041000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1345853 1347265 . - 0 ID=LTnewLM_350041000.1:CDS:1;Parent=LTnewLM_350041000.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1345853 1347265 . - . ID=LTnewLM_350041000.1:pep;Derives_from=LTnewLM_350041000.1;orthologous_to=LmjF.35.3460_mRNA;ortholog_cluster=OG0005955;product=term%3DPeroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00141;Ontology_term=GO:0006979,GO:0004601,GO:0055114,GO:0020037 LTnewLM_35 Pfam protein_match 1346396 1346866 . - . Parent=LTnewLM_350041000.1:pep;Name=PF00141;signature_desc=Peroxidase;Ontology_term=GO:0004601,GO:0020037,GO:0006979,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 1347846 1349444 1 - . ID=LTnewLM_350041100 LTnewLM_35 AUGUSTUS mRNA 1347846 1349444 1 - . ID=LTnewLM_350041100.1;Parent=LTnewLM_350041100 LTnewLM_35 AUGUSTUS CDS 1347846 1349444 1 - 0 ID=LTnewLM_350041100.1:CDS:1;Parent=LTnewLM_350041100.1 ### LTnewLM_35 . polypeptide 1347846 1349444 . - . ID=LTnewLM_350041100.1:pep;Derives_from=LTnewLM_350041100.1;orthologous_to=LmjF.35.3470_mRNA;ortholog_cluster=OG0005956;product=term%3DAcyl transferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00698 LTnewLM_35 Pfam protein_match 1348914 1349429 . - . Parent=LTnewLM_350041100.1:pep;Name=PF00698;signature_desc=Acyl transferase domain ### LTnewLM_35 AUGUSTUS gene 1352958 1355147 1 - . ID=LTnewLM_350041200 LTnewLM_35 AUGUSTUS mRNA 1352958 1355147 1 - . ID=LTnewLM_350041200.1;Parent=LTnewLM_350041200 LTnewLM_35 AUGUSTUS CDS 1352958 1355147 1 - 0 ID=LTnewLM_350041200.1:CDS:1;Parent=LTnewLM_350041200.1 ### LTnewLM_35 . polypeptide 1352958 1355147 . - . ID=LTnewLM_350041200.1:pep;Derives_from=LTnewLM_350041200.1;orthologous_to=LmjF.35.3480_mRNA;ortholog_cluster=OG0005957;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1356200 1357480 1 - . ID=LTnewLM_350041300 LTnewLM_35 AUGUSTUS mRNA 1356200 1357480 1 - . ID=LTnewLM_350041300.1;Parent=LTnewLM_350041300 LTnewLM_35 AUGUSTUS CDS 1356200 1357480 1 - 0 ID=LTnewLM_350041300.1:CDS:1;Parent=LTnewLM_350041300.1 ### LTnewLM_35 . polypeptide 1356200 1357480 . - . ID=LTnewLM_350041300.1:pep;Derives_from=LTnewLM_350041300.1;orthologous_to=LmjF.35.3490_mRNA;ortholog_cluster=OG0005958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1358332 1359228 1 - . ID=LTnewLM_350041400 LTnewLM_35 AUGUSTUS mRNA 1358332 1359228 1 - . ID=LTnewLM_350041400.1;Parent=LTnewLM_350041400 LTnewLM_35 AUGUSTUS CDS 1358332 1359228 1 - 0 ID=LTnewLM_350041400.1:CDS:1;Parent=LTnewLM_350041400.1 ### LTnewLM_35 . polypeptide 1358332 1359228 . - . ID=LTnewLM_350041400.1:pep;Derives_from=LTnewLM_350041400.1;orthologous_to=LmjF.35.3500_mRNA;ortholog_cluster=OG0005959;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 1359016 1359204 . - . Parent=LTnewLM_350041400.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 1360867 1364835 1 - . ID=LTnewLM_350041500 LTnewLM_35 AUGUSTUS mRNA 1360867 1364835 1 - . ID=LTnewLM_350041500.1;Parent=LTnewLM_350041500 LTnewLM_35 AUGUSTUS CDS 1360867 1364835 1 - 0 ID=LTnewLM_350041500.1:CDS:1;Parent=LTnewLM_350041500.1 ### LTnewLM_35 . polypeptide 1360867 1364835 . - . ID=LTnewLM_350041500.1:pep;Derives_from=LTnewLM_350041500.1;orthologous_to=LmjF.35.3510_mRNA;ortholog_cluster=OG0005960;product=term%3DRecF/RecN/SMC N terminal domain/AAA domain%2C putative AbiEii toxin%2C Type IV TA system/SMC proteins Flexible Hinge Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02463|Pfam:PF13304|Pfam:PF06470;Ontology_term=GO:0051276,GO:0005515,GO:0005694,GO:0005524 LTnewLM_35 Pfam protein_match 1360915 1364823 . - . Parent=LTnewLM_350041500.1:pep;Name=PF02463;signature_desc=RecF/RecN/SMC N terminal domain LTnewLM_35 Pfam protein_match 1362817 1363155 . - . Parent=LTnewLM_350041500.1:pep;Name=PF06470;signature_desc=SMC proteins Flexible Hinge Domain;Ontology_term=GO:0005515,GO:0005524,GO:0051276,GO:0005694 LTnewLM_35 Pfam protein_match 1364683 1364754 . - . Parent=LTnewLM_350041500.1:pep;Name=PF13304;signature_desc=AAA domain%2C putative AbiEii toxin%2C Type IV TA system;Ontology_term=GO:0005524 ### LTnewLM_35 . pseudogene 1373112 1374857 . - . ID=LTnewLM_350041600:pseudogene;coverage=0.998;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3520_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1373112 1374857 . - . ID=LTnewLM_350041600.1;Parent=LTnewLM_350041600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1373112 1374857 . - . ID=LTnewLM_350041600.1:pseudogenic_exon:1;Parent=LTnewLM_350041600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1373112 1374857 . - . ID=LTnewLM_350041600.1:pep;Derives_from=LTnewLM_350041600.1;orthologous_to=LmjF.35.3520_mRNA;ortholog_cluster=OG0007672;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1373466 1373627 . - . Parent=LTnewLM_350041600.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1373694 1373984 . - . Parent=LTnewLM_350041600.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1379464 1380744 1 - . ID=LTnewLM_350041700 LTnewLM_35 AUGUSTUS mRNA 1379464 1380744 1 - . ID=LTnewLM_350041700.1;Parent=LTnewLM_350041700 LTnewLM_35 AUGUSTUS CDS 1379464 1380744 1 - 0 ID=LTnewLM_350041700.1:CDS:1;Parent=LTnewLM_350041700.1 ### LTnewLM_35 . polypeptide 1379464 1380744 . - . ID=LTnewLM_350041700.1:pep;Derives_from=LTnewLM_350041700.1;orthologous_to=LmjF.35.3530_mRNA;ortholog_cluster=OG0005961;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1381613 1382278 1 - . ID=LTnewLM_350041800 LTnewLM_35 AUGUSTUS mRNA 1381613 1382278 1 - . ID=LTnewLM_350041800.1;Parent=LTnewLM_350041800 LTnewLM_35 AUGUSTUS CDS 1381613 1382278 1 - 0 ID=LTnewLM_350041800.1:CDS:1;Parent=LTnewLM_350041800.1 ### LTnewLM_35 . polypeptide 1381613 1382278 . - . ID=LTnewLM_350041800.1:pep;Derives_from=LTnewLM_350041800.1;orthologous_to=LmjF.35.3540_mRNA;ortholog_cluster=OG0005962;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1383213 1385465 1 - . ID=LTnewLM_350041900 LTnewLM_35 AUGUSTUS mRNA 1383213 1385465 1 - . ID=LTnewLM_350041900.1;Parent=LTnewLM_350041900 LTnewLM_35 AUGUSTUS CDS 1383213 1385465 1 - 0 ID=LTnewLM_350041900.1:CDS:1;Parent=LTnewLM_350041900.1 ### LTnewLM_35 . polypeptide 1383213 1385465 . - . ID=LTnewLM_350041900.1:pep;Derives_from=LTnewLM_350041900.1;orthologous_to=LmjF.35.3550_mRNA;ortholog_cluster=OG0005963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 1387192 1388310 . - . ID=LTnewLM_350042000.1:pep;Derives_from=LTnewLM_350042000.1;orthologous_to=LTnewLM_360011600.1,LmjF.35.3560.1_mRNA,LmjF.35.3560.2_mRNA;ortholog_cluster=OG0000253;product=term%3DCRAL/TRIO%2C N-terminal domain/CRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03765|Pfam:PF00650 LTnewLM_35 Pfam protein_match 1387486 1387848 . - . Parent=LTnewLM_350042000.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain LTnewLM_35 Pfam protein_match 1387927 1388019 . - . Parent=LTnewLM_350042000.1:pep;Name=PF03765;signature_desc=CRAL/TRIO%2C N-terminal domain ### LTnewLM_35 . polypeptide 1387192 1388537 . - . ID=LTnewLM_350042000.2:pep;Derives_from=LTnewLM_350042000.2;product=term%3Dhypothetical protein ### LTnewLM_35 . pseudogene 1387192 1390156 . - . ID=LTnewLM_350042000:pseudogene;coverage=0.994;sequence_ID=0.929;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3560_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1387192 1388346 . - . ID=LTnewLM_350042000.1;Parent=LTnewLM_350042000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1387192 1388310 . - . ID=LTnewLM_350042000.1:pseudogenic_exon:1;Parent=LTnewLM_350042000.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 1387192 1390156 . - . ID=LTnewLM_350042000.2;Parent=LTnewLM_350042000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1387192 1388537 . - . ID=LTnewLM_350042000.2:pseudogenic_exon:1;Parent=LTnewLM_350042000.2;extra_copy_number=0 ### LTnewLM_35 AUGUSTUS gene 1392271 1395843 1 - . ID=LTnewLM_350042100 LTnewLM_35 AUGUSTUS mRNA 1392271 1395843 1 - . ID=LTnewLM_350042100.1;Parent=LTnewLM_350042100 LTnewLM_35 AUGUSTUS CDS 1392271 1395843 1 - 0 ID=LTnewLM_350042100.1:CDS:1;Parent=LTnewLM_350042100.1 ### LTnewLM_35 . polypeptide 1392271 1395843 . - . ID=LTnewLM_350042100.1:pep;Derives_from=LTnewLM_350042100.1;orthologous_to=LmjF.35.3570_mRNA;ortholog_cluster=OG0005964;product=term%3DFusaric acid resistance protein-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13515 LTnewLM_35 Pfam protein_match 1393609 1393965 . - . Parent=LTnewLM_350042100.1:pep;Name=PF13515;signature_desc=Fusaric acid resistance protein-like ### LTnewLM_35 AUGUSTUS gene 1397377 1397676 1 - . ID=LTnewLM_350042200 LTnewLM_35 AUGUSTUS mRNA 1397377 1397676 1 - . ID=LTnewLM_350042200.1;Parent=LTnewLM_350042200 LTnewLM_35 AUGUSTUS CDS 1397377 1397676 1 - 0 ID=LTnewLM_350042200.1:CDS:1;Parent=LTnewLM_350042200.1 ### LTnewLM_35 . polypeptide 1397377 1397676 . - . ID=LTnewLM_350042200.1:pep;Derives_from=LTnewLM_350042200.1;orthologous_to=LTnewLM_350046800.1;ortholog_cluster=OG0005965;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1399411 1401543 1 - . ID=LTnewLM_350042300 LTnewLM_35 AUGUSTUS mRNA 1399411 1401543 1 - . ID=LTnewLM_350042300.1;Parent=LTnewLM_350042300 LTnewLM_35 AUGUSTUS CDS 1399411 1401543 1 - 0 ID=LTnewLM_350042300.1:CDS:1;Parent=LTnewLM_350042300.1 ### LTnewLM_35 . polypeptide 1399411 1401543 . - . ID=LTnewLM_350042300.1:pep;Derives_from=LTnewLM_350042300.1;orthologous_to=LmjF.35.3580_mRNA;ortholog_cluster=OG0005966;product=term%3DMatE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01554;Ontology_term=GO:0006855,GO:0016020,GO:0055085,GO:0015297,GO:0015238 LTnewLM_35 Pfam protein_match 1400248 1400727 . - . Parent=LTnewLM_350042300.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 LTnewLM_35 Pfam protein_match 1400971 1401390 . - . Parent=LTnewLM_350042300.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 ### LTnewLM_35 AUGUSTUS gene 1403380 1406169 1 - . ID=LTnewLM_350042400 LTnewLM_35 AUGUSTUS mRNA 1403380 1406169 1 - . ID=LTnewLM_350042400.1;Parent=LTnewLM_350042400 LTnewLM_35 AUGUSTUS CDS 1403380 1406169 1 - 0 ID=LTnewLM_350042400.1:CDS:1;Parent=LTnewLM_350042400.1 ### LTnewLM_35 . polypeptide 1403380 1406169 . - . ID=LTnewLM_350042400.1:pep;Derives_from=LTnewLM_350042400.1;orthologous_to=LmjF.35.3590_mRNA;ortholog_cluster=OG0005967;product=term%3DXPG N-terminal domain/XPG domain containing/XPG I-region%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00752|Pfam:PF12813|Pfam:PF00867;Ontology_term=GO:0004518,GO:0006281 LTnewLM_35 Pfam protein_match 1403515 1404270 . - . Parent=LTnewLM_350042400.1:pep;Name=PF12813;signature_desc=XPG domain containing LTnewLM_35 Pfam protein_match 1403986 1404225 . - . Parent=LTnewLM_350042400.1:pep;Name=PF00867;signature_desc=XPG I-region;Ontology_term=GO:0004518 LTnewLM_35 Pfam protein_match 1405891 1406169 . - . Parent=LTnewLM_350042400.1:pep;Name=PF00752;signature_desc=XPG N-terminal domain;Ontology_term=GO:0004518,GO:0006281 ### LTnewLM_35 AUGUSTUS gene 1406937 1408100 1 - . ID=LTnewLM_350042500 LTnewLM_35 AUGUSTUS mRNA 1406937 1408100 1 - . ID=LTnewLM_350042500.1;Parent=LTnewLM_350042500 LTnewLM_35 AUGUSTUS CDS 1406937 1408100 1 - 0 ID=LTnewLM_350042500.1:CDS:1;Parent=LTnewLM_350042500.1 ### LTnewLM_35 . polypeptide 1406937 1408100 . - . ID=LTnewLM_350042500.1:pep;Derives_from=LTnewLM_350042500.1;orthologous_to=LmjF.35.3600_mRNA;ortholog_cluster=OG0005968;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13489 LTnewLM_35 Pfam protein_match 1407075 1407845 . - . Parent=LTnewLM_350042500.1:pep;Name=PF13489;signature_desc=Methyltransferase domain ### LTnewLM_35 AUGUSTUS gene 1408782 1409525 1 - . ID=LTnewLM_350042600 LTnewLM_35 AUGUSTUS mRNA 1408782 1409525 1 - . ID=LTnewLM_350042600.1;Parent=LTnewLM_350042600 LTnewLM_35 AUGUSTUS CDS 1408782 1409525 1 - 0 ID=LTnewLM_350042600.1:CDS:1;Parent=LTnewLM_350042600.1 ### LTnewLM_35 . polypeptide 1408782 1409525 . - . ID=LTnewLM_350042600.1:pep;Derives_from=LTnewLM_350042600.1;orthologous_to=LmjF.35.3610_mRNA;ortholog_cluster=OG0005969;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_35 Pfam protein_match 1409058 1409519 . - . Parent=LTnewLM_350042600.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_35 AUGUSTUS gene 1412144 1412653 1 - . ID=LTnewLM_350042700 LTnewLM_35 AUGUSTUS mRNA 1412144 1412653 1 - . ID=LTnewLM_350042700.1;Parent=LTnewLM_350042700 LTnewLM_35 AUGUSTUS CDS 1412144 1412653 1 - 0 ID=LTnewLM_350042700.1:CDS:1;Parent=LTnewLM_350042700.1 ### LTnewLM_35 . polypeptide 1412144 1412653 . - . ID=LTnewLM_350042700.1:pep;Derives_from=LTnewLM_350042700.1;orthologous_to=LmjF.35.3620_mRNA;ortholog_cluster=OG0005970;product=term%3DNifU-like N terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01592;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_35 Pfam protein_match 1412204 1412572 . - . Parent=LTnewLM_350042700.1:pep;Name=PF01592;signature_desc=NifU-like N terminal domain;Ontology_term=GO:0005506,GO:0051536,GO:0016226 ### LTnewLM_35 AUGUSTUS gene 1413330 1415192 1 - . ID=LTnewLM_350042800 LTnewLM_35 AUGUSTUS mRNA 1413330 1415192 1 - . ID=LTnewLM_350042800.1;Parent=LTnewLM_350042800 LTnewLM_35 AUGUSTUS CDS 1413330 1415192 1 - 0 ID=LTnewLM_350042800.1:CDS:1;Parent=LTnewLM_350042800.1 ### LTnewLM_35 . polypeptide 1413330 1415192 . - . ID=LTnewLM_350042800.1:pep;Derives_from=LTnewLM_350042800.1;orthologous_to=LmjF.35.3630_mRNA;ortholog_cluster=OG0005971;product=term%3DMatE%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01554;Ontology_term=GO:0006855,GO:0016020,GO:0055085,GO:0015297,GO:0015238 LTnewLM_35 Pfam protein_match 1413705 1414190 . - . Parent=LTnewLM_350042800.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 LTnewLM_35 Pfam protein_match 1414374 1414652 . - . Parent=LTnewLM_350042800.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 LTnewLM_35 Pfam protein_match 1414728 1414940 . - . Parent=LTnewLM_350042800.1:pep;Name=PF01554;signature_desc=MatE;Ontology_term=GO:0015238,GO:0015297,GO:0006855,GO:0055085,GO:0016020 ### LTnewLM_35 AUGUSTUS gene 1416791 1417396 1 - . ID=LTnewLM_350042900 LTnewLM_35 AUGUSTUS mRNA 1416791 1417396 1 - . ID=LTnewLM_350042900.1;Parent=LTnewLM_350042900 LTnewLM_35 AUGUSTUS CDS 1416791 1417396 1 - 0 ID=LTnewLM_350042900.1:CDS:1;Parent=LTnewLM_350042900.1 ### LTnewLM_35 . polypeptide 1416791 1417396 . - . ID=LTnewLM_350042900.1:pep;Derives_from=LTnewLM_350042900.1;orthologous_to=LmjF.35.3640_mRNA;ortholog_cluster=OG0005972;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1418333 1420915 1 - . ID=LTnewLM_350043000 LTnewLM_35 AUGUSTUS mRNA 1418333 1420915 1 - . ID=LTnewLM_350043000.1;Parent=LTnewLM_350043000 LTnewLM_35 AUGUSTUS CDS 1418333 1420915 1 - 0 ID=LTnewLM_350043000.1:CDS:1;Parent=LTnewLM_350043000.1 ### LTnewLM_35 . polypeptide 1418333 1420915 . - . ID=LTnewLM_350043000.1:pep;Derives_from=LTnewLM_350043000.1;orthologous_to=LmjF.35.3650_mRNA;ortholog_cluster=OG0005973;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1421677 1426425 . - . ID=LTnewLM_350043100;coverage=0.999;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.3660_0 LTnewLM_35 Liftoff mRNA 1421677 1426425 . - . ID=LTnewLM_350043100.1;Parent=LTnewLM_350043100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1421677 1426425 . - 0 ID=LTnewLM_350043100.1:CDS:1;Parent=LTnewLM_350043100.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1421677 1426425 . - . ID=LTnewLM_350043100.1:pep;Derives_from=LTnewLM_350043100.1;orthologous_to=LmjF.35.3660_mRNA;ortholog_cluster=OG0005974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1427899 1428576 1 - . ID=LTnewLM_350043200 LTnewLM_35 AUGUSTUS mRNA 1427899 1428576 1 - . ID=LTnewLM_350043200.1;Parent=LTnewLM_350043200 LTnewLM_35 AUGUSTUS CDS 1427899 1428576 1 - 0 ID=LTnewLM_350043200.1:CDS:1;Parent=LTnewLM_350043200.1 ### LTnewLM_35 . polypeptide 1427899 1428576 . - . ID=LTnewLM_350043200.1:pep;Derives_from=LTnewLM_350043200.1;orthologous_to=LmjF.35.3670_mRNA;ortholog_cluster=OG0005975;product=term%3DNADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05676;Ontology_term=GO:0003954,GO:0005739,GO:0008137 LTnewLM_35 Pfam protein_match 1428256 1428429 . - . Parent=LTnewLM_350043200.1:pep;Name=PF05676;signature_desc=NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7);Ontology_term=GO:0003954,GO:0008137,GO:0005739 ### LTnewLM_35 AUGUSTUS gene 1434855 1435616 1 - . ID=LTnewLM_350043300 LTnewLM_35 AUGUSTUS mRNA 1434855 1435616 1 - . ID=LTnewLM_350043300.1;Parent=LTnewLM_350043300 LTnewLM_35 AUGUSTUS CDS 1434855 1435616 1 - 0 ID=LTnewLM_350043300.1:CDS:1;Parent=LTnewLM_350043300.1 ### LTnewLM_35 . polypeptide 1434855 1435616 . - . ID=LTnewLM_350043300.1:pep;Derives_from=LTnewLM_350043300.1;orthologous_to=LmjF.35.3680_mRNA;ortholog_cluster=OG0005976;product=term%3DRibulose-phosphate 3 epimerase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00834;Ontology_term=GO:0016857,GO:0005975 LTnewLM_35 Pfam protein_match 1434945 1435538 . - . Parent=LTnewLM_350043300.1:pep;Name=PF00834;signature_desc=Ribulose-phosphate 3 epimerase family;Ontology_term=GO:0016857,GO:0005975 ### LTnewLM_35 AUGUSTUS gene 1439330 1440091 1 - . ID=LTnewLM_350043400 LTnewLM_35 AUGUSTUS mRNA 1439330 1440091 1 - . ID=LTnewLM_350043400.1;Parent=LTnewLM_350043400 LTnewLM_35 AUGUSTUS CDS 1439330 1440091 1 - 0 ID=LTnewLM_350043400.1:CDS:1;Parent=LTnewLM_350043400.1 ### LTnewLM_35 . polypeptide 1439330 1440091 . - . ID=LTnewLM_350043400.1:pep;Derives_from=LTnewLM_350043400.1;orthologous_to=LmjF.35.3690_mRNA;ortholog_cluster=OG0005977;product=term%3DPeroxisomal biogenesis factor 11 (PEX11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05648;Ontology_term=GO:0016559,GO:0005779 LTnewLM_35 Pfam protein_match 1439558 1440061 . - . Parent=LTnewLM_350043400.1:pep;Name=PF05648;signature_desc=Peroxisomal biogenesis factor 11 (PEX11);Ontology_term=GO:0016559,GO:0005779 ### LTnewLM_35 AUGUSTUS gene 1442744 1443421 1 - . ID=LTnewLM_350043500 LTnewLM_35 AUGUSTUS mRNA 1442744 1443421 1 - . ID=LTnewLM_350043500.1;Parent=LTnewLM_350043500 LTnewLM_35 AUGUSTUS CDS 1442744 1443421 1 - 0 ID=LTnewLM_350043500.1:CDS:1;Parent=LTnewLM_350043500.1 ### LTnewLM_35 . polypeptide 1442744 1443421 . - . ID=LTnewLM_350043500.1:pep;Derives_from=LTnewLM_350043500.1;orthologous_to=LmjF.35.3700_mRNA;ortholog_cluster=OG0005978;product=term%3DPeroxisomal biogenesis factor 11 (PEX11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05648;Ontology_term=GO:0016559,GO:0005779 LTnewLM_35 Pfam protein_match 1442954 1443409 . - . Parent=LTnewLM_350043500.1:pep;Name=PF05648;signature_desc=Peroxisomal biogenesis factor 11 (PEX11);Ontology_term=GO:0016559,GO:0005779 ### LTnewLM_35 AUGUSTUS gene 1444181 1445206 1 - . ID=LTnewLM_350043600 LTnewLM_35 AUGUSTUS mRNA 1444181 1445206 1 - . ID=LTnewLM_350043600.1;Parent=LTnewLM_350043600 LTnewLM_35 AUGUSTUS CDS 1444181 1445206 1 - 0 ID=LTnewLM_350043600.1:CDS:1;Parent=LTnewLM_350043600.1 ### LTnewLM_35 . polypeptide 1444181 1445206 . - . ID=LTnewLM_350043600.1:pep;Derives_from=LTnewLM_350043600.1;orthologous_to=LmjF.35.3710_mRNA;ortholog_cluster=OG0005979;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1447111 1448433 1 - . ID=LTnewLM_350043700 LTnewLM_35 AUGUSTUS mRNA 1447111 1448433 1 - . ID=LTnewLM_350043700.1;Parent=LTnewLM_350043700 LTnewLM_35 AUGUSTUS CDS 1447111 1448433 1 - 0 ID=LTnewLM_350043700.1:CDS:1;Parent=LTnewLM_350043700.1 ### LTnewLM_35 . polypeptide 1447111 1448433 . - . ID=LTnewLM_350043700.1:pep;Derives_from=LTnewLM_350043700.1;orthologous_to=LmjF.35.3720_mRNA;ortholog_cluster=OG0005980;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1449725 1452256 1 - . ID=LTnewLM_350043800 LTnewLM_35 AUGUSTUS mRNA 1449725 1452256 1 - . ID=LTnewLM_350043800.1;Parent=LTnewLM_350043800 LTnewLM_35 AUGUSTUS CDS 1449725 1452256 1 - 0 ID=LTnewLM_350043800.1:CDS:1;Parent=LTnewLM_350043800.1 ### LTnewLM_35 . polypeptide 1449725 1452256 . - . ID=LTnewLM_350043800.1:pep;Derives_from=LTnewLM_350043800.1;orthologous_to=LmjF.35.3730_mRNA;ortholog_cluster=OG0005981;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1453330 1454496 1 - . ID=LTnewLM_350043900 LTnewLM_35 AUGUSTUS mRNA 1453330 1454496 1 - . ID=LTnewLM_350043900.1;Parent=LTnewLM_350043900 LTnewLM_35 AUGUSTUS CDS 1453330 1454496 1 - 0 ID=LTnewLM_350043900.1:CDS:1;Parent=LTnewLM_350043900.1 ### LTnewLM_35 . polypeptide 1453330 1454496 . - . ID=LTnewLM_350043900.1:pep;Derives_from=LTnewLM_350043900.1;orthologous_to=LmjF.35.3740_mRNA;ortholog_cluster=OG0005982;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1454913 1457615 1 - . ID=LTnewLM_350044000 LTnewLM_35 AUGUSTUS mRNA 1454913 1457615 1 - . ID=LTnewLM_350044000.1;Parent=LTnewLM_350044000 LTnewLM_35 AUGUSTUS CDS 1454913 1457615 1 - 0 ID=LTnewLM_350044000.1:CDS:1;Parent=LTnewLM_350044000.1 ### LTnewLM_35 . polypeptide 1454913 1457615 . - . ID=LTnewLM_350044000.1:pep;Derives_from=LTnewLM_350044000.1;orthologous_to=LmjF.35.3750_mRNA;ortholog_cluster=OG0005983;product=term%3DCullin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_35 Pfam protein_match 1455234 1455929 . - . Parent=LTnewLM_350044000.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_35 AUGUSTUS gene 1458556 1458993 1 - . ID=LTnewLM_350044100 LTnewLM_35 AUGUSTUS mRNA 1458556 1458993 1 - . ID=LTnewLM_350044100.1;Parent=LTnewLM_350044100 LTnewLM_35 AUGUSTUS CDS 1458556 1458993 1 - 0 ID=LTnewLM_350044100.1:CDS:1;Parent=LTnewLM_350044100.1 ### LTnewLM_35 . polypeptide 1458556 1458993 . - . ID=LTnewLM_350044100.1:pep;Derives_from=LTnewLM_350044100.1;orthologous_to=LTnewLM_350044300.1,LmjF.35.3760_mRNA,LmjF.35.3780_mRNA;ortholog_cluster=OG0000250;product=term%3DRibosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00828 LTnewLM_35 Pfam protein_match 1458571 1458912 . - . Parent=LTnewLM_350044100.1:pep;Name=PF00828;signature_desc=Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A ### LTnewLM_35 AUGUSTUS gene 1459965 1461920 1 - . ID=LTnewLM_350044200 LTnewLM_35 AUGUSTUS mRNA 1459965 1461920 1 - . ID=LTnewLM_350044200.1;Parent=LTnewLM_350044200 LTnewLM_35 AUGUSTUS CDS 1459965 1461920 1 - 0 ID=LTnewLM_350044200.1:CDS:1;Parent=LTnewLM_350044200.1 ### LTnewLM_35 . polypeptide 1459965 1461920 . - . ID=LTnewLM_350044200.1:pep;Derives_from=LTnewLM_350044200.1;orthologous_to=LmjF.35.3770_mRNA;ortholog_cluster=OG0005984;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1463505 1463942 1 - . ID=LTnewLM_350044300 LTnewLM_35 AUGUSTUS mRNA 1463505 1463942 1 - . ID=LTnewLM_350044300.1;Parent=LTnewLM_350044300 LTnewLM_35 AUGUSTUS CDS 1463505 1463942 1 - 0 ID=LTnewLM_350044300.1:CDS:1;Parent=LTnewLM_350044300.1 ### LTnewLM_35 . polypeptide 1463505 1463942 . - . ID=LTnewLM_350044300.1:pep;Derives_from=LTnewLM_350044300.1;orthologous_to=LTnewLM_350044100.1,LmjF.35.3760_mRNA,LmjF.35.3780_mRNA;ortholog_cluster=OG0000250;product=term%3DRibosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00828 LTnewLM_35 Pfam protein_match 1463520 1463861 . - . Parent=LTnewLM_350044300.1:pep;Name=PF00828;signature_desc=Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A ### LTnewLM_35 AUGUSTUS gene 1464539 1464958 1 - . ID=LTnewLM_350044400 LTnewLM_35 AUGUSTUS mRNA 1464539 1464958 1 - . ID=LTnewLM_350044400.1;Parent=LTnewLM_350044400 LTnewLM_35 AUGUSTUS CDS 1464539 1464958 1 - 0 ID=LTnewLM_350044400.1:CDS:1;Parent=LTnewLM_350044400.1 ### LTnewLM_35 . polypeptide 1464539 1464958 . - . ID=LTnewLM_350044400.1:pep;Derives_from=LTnewLM_350044400.1;orthologous_to=LTnewLM_350044500.1,LmjF.35.3790_mRNA,LmjF.35.3800_mRNA;ortholog_cluster=OG0000251;product=term%3DRibosomal protein L14p/L23e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00238;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_35 Pfam protein_match 1464545 1464898 . - . Parent=LTnewLM_350044400.1:pep;Name=PF00238;signature_desc=Ribosomal protein L14p/L23e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1465904 1466323 1 - . ID=LTnewLM_350044500 LTnewLM_35 AUGUSTUS mRNA 1465904 1466323 1 - . ID=LTnewLM_350044500.1;Parent=LTnewLM_350044500 LTnewLM_35 AUGUSTUS CDS 1465904 1466323 1 - 0 ID=LTnewLM_350044500.1:CDS:1;Parent=LTnewLM_350044500.1 ### LTnewLM_35 . polypeptide 1465904 1466323 . - . ID=LTnewLM_350044500.1:pep;Derives_from=LTnewLM_350044500.1;orthologous_to=LTnewLM_350044400.1,LmjF.35.3790_mRNA,LmjF.35.3800_mRNA;ortholog_cluster=OG0000251;product=term%3DRibosomal protein L14p/L23e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00238;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_35 Pfam protein_match 1465910 1466263 . - . Parent=LTnewLM_350044500.1:pep;Name=PF00238;signature_desc=Ribosomal protein L14p/L23e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1466992 1467435 1 - . ID=LTnewLM_350044600 LTnewLM_35 AUGUSTUS mRNA 1466992 1467435 1 - . ID=LTnewLM_350044600.1;Parent=LTnewLM_350044600 LTnewLM_35 AUGUSTUS CDS 1466992 1467435 1 - 0 ID=LTnewLM_350044600.1:CDS:1;Parent=LTnewLM_350044600.1 ### LTnewLM_35 . polypeptide 1466992 1467435 . - . ID=LTnewLM_350044600.1:pep;Derives_from=LTnewLM_350044600.1;orthologous_to=LmjF.35.3810_mRNA;ortholog_cluster=OG0005985;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1468179 1469204 1 - . ID=LTnewLM_350044700 LTnewLM_35 AUGUSTUS mRNA 1468179 1469204 1 - . ID=LTnewLM_350044700.1;Parent=LTnewLM_350044700 LTnewLM_35 AUGUSTUS CDS 1468179 1469204 1 - 0 ID=LTnewLM_350044700.1:CDS:1;Parent=LTnewLM_350044700.1 ### LTnewLM_35 . polypeptide 1468179 1469204 . - . ID=LTnewLM_350044700.1:pep;Derives_from=LTnewLM_350044700.1;orthologous_to=LmjF.35.3820_mRNA;ortholog_cluster=OG0005986;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1470415 1471365 1 - . ID=LTnewLM_350044800 LTnewLM_35 AUGUSTUS mRNA 1470415 1471365 1 - . ID=LTnewLM_350044800.1;Parent=LTnewLM_350044800 LTnewLM_35 AUGUSTUS CDS 1470415 1471365 1 - 0 ID=LTnewLM_350044800.1:CDS:1;Parent=LTnewLM_350044800.1 ### LTnewLM_35 . polypeptide 1470415 1471365 . - . ID=LTnewLM_350044800.1:pep;Derives_from=LTnewLM_350044800.1;orthologous_to=LmjF.35.3830_mRNA;ortholog_cluster=OG0005987;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1472640 1473404 1 - . ID=LTnewLM_350044900 LTnewLM_35 AUGUSTUS mRNA 1472640 1473404 1 - . ID=LTnewLM_350044900.1;Parent=LTnewLM_350044900 LTnewLM_35 AUGUSTUS CDS 1472640 1473404 1 - 0 ID=LTnewLM_350044900.1:CDS:1;Parent=LTnewLM_350044900.1 ### LTnewLM_35 . polypeptide 1472640 1473404 . - . ID=LTnewLM_350044900.1:pep;Derives_from=LTnewLM_350044900.1;orthologous_to=LmjF.35.3840_mRNA;ortholog_cluster=OG0005988;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_35 Pfam protein_match 1472787 1473326 . - . Parent=LTnewLM_350044900.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_35 AUGUSTUS gene 1474544 1475482 1 - . ID=LTnewLM_350045000 LTnewLM_35 AUGUSTUS mRNA 1474544 1475482 1 - . ID=LTnewLM_350045000.1;Parent=LTnewLM_350045000 LTnewLM_35 AUGUSTUS CDS 1474544 1475482 1 - 0 ID=LTnewLM_350045000.1:CDS:1;Parent=LTnewLM_350045000.1 ### LTnewLM_35 . polypeptide 1474544 1475482 . - . ID=LTnewLM_350045000.1:pep;Derives_from=LTnewLM_350045000.1;orthologous_to=LmjF.35.3850_mRNA;ortholog_cluster=OG0005989;product=term%3DRibosomal protein S17%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00366;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 1475003 1475197 . - . Parent=LTnewLM_350045000.1:pep;Name=PF00366;signature_desc=Ribosomal protein S17;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1477512 1479224 1 - . ID=LTnewLM_350045100 LTnewLM_35 AUGUSTUS mRNA 1477512 1479224 1 - . ID=LTnewLM_350045100.1;Parent=LTnewLM_350045100 LTnewLM_35 AUGUSTUS CDS 1477512 1479224 1 - 0 ID=LTnewLM_350045100.1:CDS:1;Parent=LTnewLM_350045100.1 ### LTnewLM_35 . polypeptide 1477512 1479224 . - . ID=LTnewLM_350045100.1:pep;Derives_from=LTnewLM_350045100.1;orthologous_to=LmjF.35.3860_mRNA;ortholog_cluster=OG0005990;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_35 Pfam protein_match 1477659 1479128 . - . Parent=LTnewLM_350045100.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_35 AUGUSTUS gene 1480347 1481360 1 - . ID=LTnewLM_350045200 LTnewLM_35 AUGUSTUS mRNA 1480347 1481360 1 - . ID=LTnewLM_350045200.1;Parent=LTnewLM_350045200 LTnewLM_35 AUGUSTUS CDS 1480347 1481360 1 - 0 ID=LTnewLM_350045200.1:CDS:1;Parent=LTnewLM_350045200.1 ### LTnewLM_35 . polypeptide 1480347 1481360 . - . ID=LTnewLM_350045200.1:pep;Derives_from=LTnewLM_350045200.1;orthologous_to=LmjF.35.3870_mRNA;ortholog_cluster=OG0005991;product=term%3DNucleoside diphosphate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00334;Ontology_term=GO:0006241,GO:0005524,GO:0006183,GO:0006165,GO:0004550,GO:0006228 LTnewLM_35 Pfam protein_match 1480371 1480766 . - . Parent=LTnewLM_350045200.1:pep;Name=PF00334;signature_desc=Nucleoside diphosphate kinase;Ontology_term=GO:0004550,GO:0005524,GO:0006165,GO:0006183,GO:0006228,GO:0006241 ### LTnewLM_35 AUGUSTUS gene 1482176 1483510 1 - . ID=LTnewLM_350045300 LTnewLM_35 AUGUSTUS mRNA 1482176 1483510 1 - . ID=LTnewLM_350045300.1;Parent=LTnewLM_350045300 LTnewLM_35 AUGUSTUS CDS 1482176 1483510 1 - 0 ID=LTnewLM_350045300.1:CDS:1;Parent=LTnewLM_350045300.1 ### LTnewLM_35 . polypeptide 1482176 1483510 . - . ID=LTnewLM_350045300.1:pep;Derives_from=LTnewLM_350045300.1;orthologous_to=LmjF.35.3880_mRNA;ortholog_cluster=OG0005992;product=term%3DWD domain%2C G-beta repeat/Sof1-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF04158;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1482236 1482436 . - . Parent=LTnewLM_350045300.1:pep;Name=PF04158;signature_desc=Sof1-like domain LTnewLM_35 Pfam protein_match 1482443 1482529 . - . Parent=LTnewLM_350045300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1482581 1482691 . - . Parent=LTnewLM_350045300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1483100 1483195 . - . Parent=LTnewLM_350045300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1483226 1483327 . - . Parent=LTnewLM_350045300.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1484010 1484447 1 - . ID=LTnewLM_350045400 LTnewLM_35 AUGUSTUS mRNA 1484010 1484447 1 - . ID=LTnewLM_350045400.1;Parent=LTnewLM_350045400 LTnewLM_35 AUGUSTUS CDS 1484010 1484447 1 - 0 ID=LTnewLM_350045400.1:CDS:1;Parent=LTnewLM_350045400.1 ### LTnewLM_35 . polypeptide 1484010 1484447 . - . ID=LTnewLM_350045400.1:pep;Derives_from=LTnewLM_350045400.1;orthologous_to=LmjF.35.3890_mRNA;ortholog_cluster=OG0005993;product=term%3DEF-hand domain/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13405|Pfam:PF00036;Ontology_term=GO:0005509 LTnewLM_35 Pfam protein_match 1484151 1484231 . - . Parent=LTnewLM_350045400.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_35 Pfam protein_match 1484151 1484231 . - . Parent=LTnewLM_350045400.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_35 AUGUSTUS gene 1484963 1486039 0.99 - . ID=LTnewLM_350045500 LTnewLM_35 AUGUSTUS mRNA 1484963 1486039 0.99 - . ID=LTnewLM_350045500.1;Parent=LTnewLM_350045500 LTnewLM_35 AUGUSTUS CDS 1484963 1486039 0.99 - 0 ID=LTnewLM_350045500.1:CDS:1;Parent=LTnewLM_350045500.1 ### LTnewLM_35 . polypeptide 1484963 1486039 . - . ID=LTnewLM_350045500.1:pep;Derives_from=LTnewLM_350045500.1;orthologous_to=LmjF.35.3900_mRNA;ortholog_cluster=OG0005994;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1486680 1487259 . - . ID=LTnewLM_350045600:pseudogene;coverage=0.993;sequence_ID=0.868;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3910_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1486680 1487259 . - . ID=LTnewLM_350045600.1;Parent=LTnewLM_350045600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1486680 1487259 . - . ID=LTnewLM_350045600.1:pseudogenic_exon:1;Parent=LTnewLM_350045600.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1486680 1487259 . - . ID=LTnewLM_350045600.1:pep;Derives_from=LTnewLM_350045600.1;orthologous_to=LmjF.35.3910_mRNA;ortholog_cluster=OG0007673;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1488762 1491176 1 + . ID=LTnewLM_350045700 LTnewLM_35 AUGUSTUS mRNA 1488762 1491176 1 + . ID=LTnewLM_350045700.1;Parent=LTnewLM_350045700 LTnewLM_35 AUGUSTUS CDS 1488762 1491176 1 + 0 ID=LTnewLM_350045700.1:CDS:1;Parent=LTnewLM_350045700.1 ### LTnewLM_35 . polypeptide 1488762 1491176 . + . ID=LTnewLM_350045700.1:pep;Derives_from=LTnewLM_350045700.1;orthologous_to=LmjF.35.3920_mRNA;ortholog_cluster=OG0005995;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1492112 1493542 1 + . ID=LTnewLM_350045800 LTnewLM_35 AUGUSTUS mRNA 1492112 1493542 1 + . ID=LTnewLM_350045800.1;Parent=LTnewLM_350045800 LTnewLM_35 AUGUSTUS CDS 1492112 1493542 1 + 0 ID=LTnewLM_350045800.1:CDS:1;Parent=LTnewLM_350045800.1 ### LTnewLM_35 . polypeptide 1492112 1493542 . + . ID=LTnewLM_350045800.1:pep;Derives_from=LTnewLM_350045800.1;orthologous_to=LmjF.35.3925_mRNA;ortholog_cluster=OG0005996;product=term%3DSperm-tail PG-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07004 LTnewLM_35 Pfam protein_match 1492175 1492240 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 1492286 1492342 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 1492400 1492474 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 1492520 1492567 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 1492625 1492648 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_35 Pfam protein_match 1492994 1493029 . + . Parent=LTnewLM_350045800.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat ### LTnewLM_35 AUGUSTUS gene 1494567 1495337 1 + . ID=LTnewLM_350045900 LTnewLM_35 AUGUSTUS mRNA 1494567 1495337 1 + . ID=LTnewLM_350045900.1;Parent=LTnewLM_350045900 LTnewLM_35 AUGUSTUS CDS 1494567 1495337 1 + 0 ID=LTnewLM_350045900.1:CDS:1;Parent=LTnewLM_350045900.1 ### LTnewLM_35 . polypeptide 1494567 1495337 . + . ID=LTnewLM_350045900.1:pep;Derives_from=LTnewLM_350045900.1;orthologous_to=LmjF.35.3930_mRNA;ortholog_cluster=OG0005997;product=term%3DUNC-50 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05216 LTnewLM_35 Pfam protein_match 1494621 1495307 . + . Parent=LTnewLM_350045900.1:pep;Name=PF05216;signature_desc=UNC-50 family ### LTnewLM_35 AUGUSTUS gene 1496391 1498205 1 + . ID=LTnewLM_350046000 LTnewLM_35 AUGUSTUS mRNA 1496391 1498205 1 + . ID=LTnewLM_350046000.1;Parent=LTnewLM_350046000 LTnewLM_35 AUGUSTUS CDS 1496391 1498205 1 + 0 ID=LTnewLM_350046000.1:CDS:1;Parent=LTnewLM_350046000.1 ### LTnewLM_35 . polypeptide 1496391 1498205 . + . ID=LTnewLM_350046000.1:pep;Derives_from=LTnewLM_350046000.1;orthologous_to=LmjF.35.3940_mRNA;ortholog_cluster=OG0005998;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1499747 1507030 1 + . ID=LTnewLM_350046100 LTnewLM_35 AUGUSTUS mRNA 1499747 1507030 1 + . ID=LTnewLM_350046100.1;Parent=LTnewLM_350046100 LTnewLM_35 AUGUSTUS CDS 1499747 1507030 1 + 0 ID=LTnewLM_350046100.1:CDS:1;Parent=LTnewLM_350046100.1 ### LTnewLM_35 . polypeptide 1499747 1507030 . + . ID=LTnewLM_350046100.1:pep;Derives_from=LTnewLM_350046100.1;orthologous_to=LmjF.35.3950_mRNA;ortholog_cluster=OG0005999;product=term%3DPRO8NT (NUC069)%2C PrP8 N-terminal domain/PROCN (NUC071) domain/RNA recognition motif of the spliceosomal PrP8/U5-snRNA binding site 2 of PrP8/U6-snRNA interacting domain of PrP8/PRP8 domain IV core/PROCT (NUC072) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08082|Pfam:PF08083|Pfam:PF10598|Pfam:PF10597|Pfam:PF10596|Pfam:PF12134|Pfam:PF08084;Ontology_term=GO:0003723,GO:0017070,GO:0030623,GO:0000398 LTnewLM_35 Pfam protein_match 1499933 1500394 . + . Parent=LTnewLM_350046100.1:pep;Name=PF08082;signature_desc=PRO8NT (NUC069)%2C PrP8 N-terminal domain;Ontology_term=GO:0000398 LTnewLM_35 Pfam protein_match 1501043 1502320 . + . Parent=LTnewLM_350046100.1:pep;Name=PF08083;signature_desc=PROCN (NUC071) domain;Ontology_term=GO:0000398 LTnewLM_35 Pfam protein_match 1502903 1503169 . + . Parent=LTnewLM_350046100.1:pep;Name=PF10598;signature_desc=RNA recognition motif of the spliceosomal PrP8;Ontology_term=GO:0003723 LTnewLM_35 Pfam protein_match 1503593 1503988 . + . Parent=LTnewLM_350046100.1:pep;Name=PF10597;signature_desc=U5-snRNA binding site 2 of PrP8;Ontology_term=GO:0030623 LTnewLM_35 Pfam protein_match 1504286 1504762 . + . Parent=LTnewLM_350046100.1:pep;Name=PF10596;signature_desc=U6-snRNA interacting domain of PrP8;Ontology_term=GO:0017070 LTnewLM_35 Pfam protein_match 1505246 1505944 . + . Parent=LTnewLM_350046100.1:pep;Name=PF12134;signature_desc=PRP8 domain IV core LTnewLM_35 Pfam protein_match 1506623 1506976 . + . Parent=LTnewLM_350046100.1:pep;Name=PF08084;signature_desc=PROCT (NUC072) domain ### LTnewLM_35 AUGUSTUS gene 1508562 1509711 1 + . ID=LTnewLM_350046200 LTnewLM_35 AUGUSTUS mRNA 1508562 1509711 1 + . ID=LTnewLM_350046200.1;Parent=LTnewLM_350046200 LTnewLM_35 AUGUSTUS CDS 1508562 1509430 1 + 0 ID=LTnewLM_350046200.1:CDS:1;Parent=LTnewLM_350046200.1 LTnewLM_35 AUGUSTUS CDS 1509507 1509711 1 + 1 ID=LTnewLM_350046200.1:CDS:2;Parent=LTnewLM_350046200.1 ### LTnewLM_35 . polypeptide 1508562 1509711 . + . ID=LTnewLM_350046200.1:pep;Derives_from=LTnewLM_350046200.1;orthologous_to=LTnewLM_350046700.1,LmjF.35.3960_mRNA,LmjF.35.4010_mRNA;ortholog_cluster=OG0000252;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 1508778 1509407 . + . Parent=LTnewLM_350046200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1508781 1509407 . + . Parent=LTnewLM_350046200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_35 . pseudogene 1513389 1515870 . + . ID=LTnewLM_350046300:pseudogene;coverage=0.997;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.3970_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1513389 1515870 . + . ID=LTnewLM_350046300.1;Parent=LTnewLM_350046300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1513389 1515870 . + . ID=LTnewLM_350046300.1:pseudogenic_exon:1;Parent=LTnewLM_350046300.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1513389 1515870 . + . ID=LTnewLM_350046300.1:pep;Derives_from=LTnewLM_350046300.1;orthologous_to=LTnewLM_300042900.1,LTnewLM_300043100.1,LmjF.30.3490_mRNA,LmjF.30.3510_mRNA,LmjF.35.3970_mRNA;ortholog_cluster=OG0000064;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1523282 1525657 1 + . ID=LTnewLM_350046400 LTnewLM_35 AUGUSTUS mRNA 1523282 1525657 1 + . ID=LTnewLM_350046400.1;Parent=LTnewLM_350046400 LTnewLM_35 AUGUSTUS CDS 1523282 1525657 1 + 0 ID=LTnewLM_350046400.1:CDS:1;Parent=LTnewLM_350046400.1 ### LTnewLM_35 . polypeptide 1523282 1525657 . + . ID=LTnewLM_350046400.1:pep;Derives_from=LTnewLM_350046400.1;orthologous_to=LmjF.35.3980_mRNA;ortholog_cluster=OG0006000;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1533682 1534764 1 + . ID=LTnewLM_350046500 LTnewLM_35 AUGUSTUS mRNA 1533682 1534764 1 + . ID=LTnewLM_350046500.1;Parent=LTnewLM_350046500 LTnewLM_35 AUGUSTUS CDS 1533682 1534764 1 + 0 ID=LTnewLM_350046500.1:CDS:1;Parent=LTnewLM_350046500.1 ### LTnewLM_35 . polypeptide 1533682 1534764 . + . ID=LTnewLM_350046500.1:pep;Derives_from=LTnewLM_350046500.1;orthologous_to=LmjF.35.3990_mRNA;ortholog_cluster=OG0006001;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_35 Pfam protein_match 1533685 1533969 . + . Parent=LTnewLM_350046500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_35 Pfam protein_match 1534108 1534368 . + . Parent=LTnewLM_350046500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_35 Pfam protein_match 1534456 1534755 . + . Parent=LTnewLM_350046500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_35 . polypeptide 1536996 1538329 . + . ID=LTnewLM_350046600.1:pep;Derives_from=LTnewLM_350046600.1;orthologous_to=LTnewLM_350046600.2,LmjF.35.4000_mRNA;ortholog_cluster=OG0000472;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07719|Pfam:PF00515|Pfam:PF13181;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1537383 1537466 . + . Parent=LTnewLM_350046600.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 1537392 1537466 . + . Parent=LTnewLM_350046600.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1537395 1537466 . + . Parent=LTnewLM_350046600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1537581 1537667 . + . Parent=LTnewLM_350046600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1536996 1541273 1.37 + . ID=LTnewLM_350046600 LTnewLM_35 AUGUSTUS mRNA 1536996 1538329 0.37 + . ID=LTnewLM_350046600.1;Parent=LTnewLM_350046600 LTnewLM_35 AUGUSTUS CDS 1536996 1538263 0.62 + 0 ID=LTnewLM_350046600.1:CDS:1;Parent=LTnewLM_350046600.1 LTnewLM_35 AUGUSTUS CDS 1538323 1538329 0.37 + 1 ID=LTnewLM_350046600.1:CDS:2;Parent=LTnewLM_350046600.1 LTnewLM_35 AUGUSTUS mRNA 1536996 1541273 1 + . ID=LTnewLM_350046600.2;Parent=LTnewLM_350046600 LTnewLM_35 AUGUSTUS CDS 1536996 1541273 1 + 0 ID=LTnewLM_350046600.2:CDS:1;Parent=LTnewLM_350046600.2 ### LTnewLM_35 . polypeptide 1536996 1541273 . + . ID=LTnewLM_350046600.2:pep;Derives_from=LTnewLM_350046600.2;orthologous_to=LTnewLM_350046600.1,LmjF.35.4000_mRNA;ortholog_cluster=OG0000472;product=term%3DTetratricopeptide repeat/Protein tyrosine and serine/threonine kinase/Protein kinase domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07719|Pfam:PF13181|Pfam:PF07714|Pfam:PF00069|Pfam:PF00632;Ontology_term=GO:0004842,GO:0006468,GO:0004672,GO:0005515,GO:0005524 LTnewLM_35 Pfam protein_match 1537383 1537466 . + . Parent=LTnewLM_350046600.2:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 1537395 1537466 . + . Parent=LTnewLM_350046600.2:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1537581 1537667 . + . Parent=LTnewLM_350046600.2:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1539195 1539980 . + . Parent=LTnewLM_350046600.2:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 1539210 1539998 . + . Parent=LTnewLM_350046600.2:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1540464 1541264 . + . Parent=LTnewLM_350046600.2:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_35 AUGUSTUS gene 1542955 1544070 1 + . ID=LTnewLM_350046700 LTnewLM_35 AUGUSTUS mRNA 1542955 1544070 1 + . ID=LTnewLM_350046700.1;Parent=LTnewLM_350046700 LTnewLM_35 AUGUSTUS CDS 1542955 1544070 1 + 0 ID=LTnewLM_350046700.1:CDS:1;Parent=LTnewLM_350046700.1 ### LTnewLM_35 . polypeptide 1542955 1544070 . + . ID=LTnewLM_350046700.1:pep;Derives_from=LTnewLM_350046700.1;orthologous_to=LTnewLM_350046200.1,LmjF.35.3960_mRNA,LmjF.35.4010_mRNA;ortholog_cluster=OG0000252;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 1543138 1543899 . + . Parent=LTnewLM_350046700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1543141 1543848 . + . Parent=LTnewLM_350046700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 1545216 1545514 0.4 + . ID=LTnewLM_350046800 LTnewLM_35 AUGUSTUS mRNA 1545216 1545514 0.4 + . ID=LTnewLM_350046800.1;Parent=LTnewLM_350046800 LTnewLM_35 AUGUSTUS CDS 1545216 1545445 0.4 + 0 ID=LTnewLM_350046800.1:CDS:1;Parent=LTnewLM_350046800.1 LTnewLM_35 AUGUSTUS CDS 1545493 1545514 0.55 + 1 ID=LTnewLM_350046800.1:CDS:2;Parent=LTnewLM_350046800.1 ### LTnewLM_35 . polypeptide 1545216 1545514 . + . ID=LTnewLM_350046800.1:pep;Derives_from=LTnewLM_350046800.1;orthologous_to=LTnewLM_350042200.1;ortholog_cluster=OG0005965;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1550035 1551219 1 + . ID=LTnewLM_350046900 LTnewLM_35 AUGUSTUS mRNA 1550035 1551219 1 + . ID=LTnewLM_350046900.1;Parent=LTnewLM_350046900 LTnewLM_35 AUGUSTUS CDS 1550035 1551219 1 + 0 ID=LTnewLM_350046900.1:CDS:1;Parent=LTnewLM_350046900.1 ### LTnewLM_35 . polypeptide 1550035 1551219 . + . ID=LTnewLM_350046900.1:pep;Derives_from=LTnewLM_350046900.1;orthologous_to=LmjF.35.4020_mRNA;ortholog_cluster=OG0006002;product=term%3Dalpha/beta hydrolase fold/Serine aminopeptidase%2C S33/Alpha/beta hydrolase family/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00561|Pfam:PF12146|Pfam:PF12697|Pfam:PF00326;Ontology_term=GO:0006508,GO:0008236 LTnewLM_35 Pfam protein_match 1550491 1550820 . + . Parent=LTnewLM_350046900.1:pep;Name=PF00561;signature_desc=alpha/beta hydrolase fold LTnewLM_35 Pfam protein_match 1550491 1550889 . + . Parent=LTnewLM_350046900.1:pep;Name=PF12146;signature_desc=Serine aminopeptidase%2C S33 LTnewLM_35 Pfam protein_match 1550539 1550847 . + . Parent=LTnewLM_350046900.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family LTnewLM_35 Pfam protein_match 1550632 1551060 . + . Parent=LTnewLM_350046900.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 ### LTnewLM_35 AUGUSTUS gene 1553505 1555598 1 + . ID=LTnewLM_350047000 LTnewLM_35 AUGUSTUS mRNA 1553505 1555598 1 + . ID=LTnewLM_350047000.1;Parent=LTnewLM_350047000 LTnewLM_35 AUGUSTUS CDS 1553505 1555598 1 + 0 ID=LTnewLM_350047000.1:CDS:1;Parent=LTnewLM_350047000.1 ### LTnewLM_35 . polypeptide 1553505 1555598 . + . ID=LTnewLM_350047000.1:pep;Derives_from=LTnewLM_350047000.1;orthologous_to=LmjF.35.4030_mRNA;ortholog_cluster=OG0006003;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Domain of unknown function (DUF4217)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF13959;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 1553598 1554173 . + . Parent=LTnewLM_350047000.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_35 Pfam protein_match 1554315 1554653 . + . Parent=LTnewLM_350047000.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_35 Pfam protein_match 1555023 1555169 . + . Parent=LTnewLM_350047000.1:pep;Name=PF13959;signature_desc=Domain of unknown function (DUF4217) ### LTnewLM_35 AUGUSTUS gene 1556803 1557963 1 + . ID=LTnewLM_350047100 LTnewLM_35 AUGUSTUS mRNA 1556803 1557963 1 + . ID=LTnewLM_350047100.1;Parent=LTnewLM_350047100 LTnewLM_35 AUGUSTUS CDS 1556803 1557963 1 + 0 ID=LTnewLM_350047100.1:CDS:1;Parent=LTnewLM_350047100.1 ### LTnewLM_35 . polypeptide 1556803 1557963 . + . ID=LTnewLM_350047100.1:pep;Derives_from=LTnewLM_350047100.1;orthologous_to=LmjF.35.4040_mRNA;ortholog_cluster=OG0006004;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_35 Pfam protein_match 1556812 1556907 . + . Parent=LTnewLM_350047100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_35 AUGUSTUS gene 1559069 1559416 1 + . ID=LTnewLM_350047200 LTnewLM_35 AUGUSTUS mRNA 1559069 1559416 1 + . ID=LTnewLM_350047200.1;Parent=LTnewLM_350047200 LTnewLM_35 AUGUSTUS CDS 1559069 1559416 1 + 0 ID=LTnewLM_350047200.1:CDS:1;Parent=LTnewLM_350047200.1 ### LTnewLM_35 . polypeptide 1559069 1559416 . + . ID=LTnewLM_350047200.1:pep;Derives_from=LTnewLM_350047200.1;orthologous_to=LmjF.35.4045_mRNA;ortholog_cluster=OG0006005;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1560919 1564755 1 + . ID=LTnewLM_350047300 LTnewLM_35 AUGUSTUS mRNA 1560919 1564755 1 + . ID=LTnewLM_350047300.1;Parent=LTnewLM_350047300 LTnewLM_35 AUGUSTUS CDS 1560919 1564755 1 + 0 ID=LTnewLM_350047300.1:CDS:1;Parent=LTnewLM_350047300.1 ### LTnewLM_35 . polypeptide 1560919 1564755 . + . ID=LTnewLM_350047300.1:pep;Derives_from=LTnewLM_350047300.1;orthologous_to=LmjF.35.4050_mRNA;ortholog_cluster=OG0006006;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1561036 1561893 . + . Parent=LTnewLM_350047300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 1561036 1561899 . + . Parent=LTnewLM_350047300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1561318 1561626 . + . Parent=LTnewLM_350047300.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_35 AUGUSTUS gene 1565734 1566573 1 + . ID=LTnewLM_350047400 LTnewLM_35 AUGUSTUS mRNA 1565734 1566573 1 + . ID=LTnewLM_350047400.1;Parent=LTnewLM_350047400 LTnewLM_35 AUGUSTUS CDS 1565734 1566573 1 + 0 ID=LTnewLM_350047400.1:CDS:1;Parent=LTnewLM_350047400.1 ### LTnewLM_35 . polypeptide 1565734 1566573 . + . ID=LTnewLM_350047400.1:pep;Derives_from=LTnewLM_350047400.1;orthologous_to=LmjF.35.4060_mRNA;ortholog_cluster=OG0006007;product=term%3DRegulatory subunit of type II PKA R-subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02197 LTnewLM_35 Pfam protein_match 1565803 1565895 . + . Parent=LTnewLM_350047400.1:pep;Name=PF02197;signature_desc=Regulatory subunit of type II PKA R-subunit ### LTnewLM_35 AUGUSTUS gene 1567817 1568833 1 + . ID=LTnewLM_350047500 LTnewLM_35 AUGUSTUS mRNA 1567817 1568833 1 + . ID=LTnewLM_350047500.1;Parent=LTnewLM_350047500 LTnewLM_35 AUGUSTUS CDS 1567817 1568833 1 + 0 ID=LTnewLM_350047500.1:CDS:1;Parent=LTnewLM_350047500.1 ### LTnewLM_35 . polypeptide 1567817 1568833 . + . ID=LTnewLM_350047500.1:pep;Derives_from=LTnewLM_350047500.1;orthologous_to=LmjF.35.4070_mRNA;ortholog_cluster=OG0006008;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13428|Pfam:PF14559 LTnewLM_35 Pfam protein_match 1567829 1567948 . + . Parent=LTnewLM_350047500.1:pep;Name=PF13428;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 1567856 1568056 . + . Parent=LTnewLM_350047500.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat ### LTnewLM_35 AUGUSTUS gene 1570062 1573382 0.86 + . ID=LTnewLM_350047600 LTnewLM_35 AUGUSTUS mRNA 1570062 1573382 0.86 + . ID=LTnewLM_350047600.1;Parent=LTnewLM_350047600 LTnewLM_35 AUGUSTUS CDS 1570062 1573382 0.86 + 0 ID=LTnewLM_350047600.1:CDS:1;Parent=LTnewLM_350047600.1 ### LTnewLM_35 . polypeptide 1570062 1573382 . + . ID=LTnewLM_350047600.1:pep;Derives_from=LTnewLM_350047600.1;orthologous_to=LmjF.35.4080_mRNA;ortholog_cluster=OG0006009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1574405 1574659 1 + . ID=LTnewLM_350047700 LTnewLM_35 AUGUSTUS mRNA 1574405 1574659 1 + . ID=LTnewLM_350047700.1;Parent=LTnewLM_350047700 LTnewLM_35 AUGUSTUS CDS 1574405 1574659 1 + 0 ID=LTnewLM_350047700.1:CDS:1;Parent=LTnewLM_350047700.1 ### LTnewLM_35 . polypeptide 1574405 1574659 . + . ID=LTnewLM_350047700.1:pep;Derives_from=LTnewLM_350047700.1;orthologous_to=LmjF.35.4090_mRNA;ortholog_cluster=OG0006010;product=term%3DSplicing factor 3B subunit 10 (SF3b10)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07189 LTnewLM_35 Pfam protein_match 1574450 1574647 . + . Parent=LTnewLM_350047700.1:pep;Name=PF07189;signature_desc=Splicing factor 3B subunit 10 (SF3b10) ### LTnewLM_35 AUGUSTUS gene 1575984 1577429 2 + . ID=LTnewLM_350047800 LTnewLM_35 AUGUSTUS mRNA 1575984 1577429 1 + . ID=LTnewLM_350047800.1;Parent=LTnewLM_350047800 LTnewLM_35 AUGUSTUS CDS 1575984 1577429 1 + 0 ID=LTnewLM_350047800.1:CDS:1;Parent=LTnewLM_350047800.1 LTnewLM_35 AUGUSTUS mRNA 1576161 1577429 1 + . ID=LTnewLM_350047800.2;Parent=LTnewLM_350047800 LTnewLM_35 AUGUSTUS CDS 1576161 1577429 1 + 0 ID=LTnewLM_350047800.2:CDS:1;Parent=LTnewLM_350047800.2 ### LTnewLM_35 . polypeptide 1575984 1577429 . + . ID=LTnewLM_350047800.1:pep;Derives_from=LTnewLM_350047800.1;orthologous_to=LTnewLM_350047800.2,LmjF.35.4100_mRNA;ortholog_cluster=OG0000473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 1576161 1577429 . + . ID=LTnewLM_350047800.2:pep;Derives_from=LTnewLM_350047800.2;orthologous_to=LTnewLM_350047800.1,LmjF.35.4100_mRNA;ortholog_cluster=OG0000473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1578265 1578885 1 + . ID=LTnewLM_350047900 LTnewLM_35 AUGUSTUS mRNA 1578265 1578885 1 + . ID=LTnewLM_350047900.1;Parent=LTnewLM_350047900 LTnewLM_35 AUGUSTUS CDS 1578265 1578885 1 + 0 ID=LTnewLM_350047900.1:CDS:1;Parent=LTnewLM_350047900.1 ### LTnewLM_35 . polypeptide 1578265 1578885 . + . ID=LTnewLM_350047900.1:pep;Derives_from=LTnewLM_350047900.1;orthologous_to=LmjF.35.4110_mRNA;ortholog_cluster=OG0006011;product=term%3D5'-deoxynucleotidase YfbR-like/HD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12917|Pfam:PF13023|Pfam:PF01966 LTnewLM_35 Pfam protein_match 1578310 1578714 . + . Parent=LTnewLM_350047900.1:pep;Name=PF12917;signature_desc=5'-deoxynucleotidase YfbR-like LTnewLM_35 Pfam protein_match 1578322 1578735 . + . Parent=LTnewLM_350047900.1:pep;Name=PF13023;signature_desc=HD domain LTnewLM_35 Pfam protein_match 1578394 1578702 . + . Parent=LTnewLM_350047900.1:pep;Name=PF01966;signature_desc=HD domain ### LTnewLM_35 AUGUSTUS gene 1579744 1582938 1 + . ID=LTnewLM_350048000 LTnewLM_35 AUGUSTUS mRNA 1579744 1582938 1 + . ID=LTnewLM_350048000.1;Parent=LTnewLM_350048000 LTnewLM_35 AUGUSTUS CDS 1579744 1582938 1 + 0 ID=LTnewLM_350048000.1:CDS:1;Parent=LTnewLM_350048000.1 ### LTnewLM_35 . polypeptide 1579744 1582938 . + . ID=LTnewLM_350048000.1:pep;Derives_from=LTnewLM_350048000.1;orthologous_to=LmjF.35.4120_mRNA;ortholog_cluster=OG0006012;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1584137 1585894 1 + . ID=LTnewLM_350048100 LTnewLM_35 AUGUSTUS mRNA 1584137 1585894 1 + . ID=LTnewLM_350048100.1;Parent=LTnewLM_350048100 LTnewLM_35 AUGUSTUS CDS 1584137 1585894 1 + 0 ID=LTnewLM_350048100.1:CDS:1;Parent=LTnewLM_350048100.1 ### LTnewLM_35 . polypeptide 1584137 1585894 . + . ID=LTnewLM_350048100.1:pep;Derives_from=LTnewLM_350048100.1;orthologous_to=LmjF.35.4125_mRNA;ortholog_cluster=OG0006013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1588389 1590146 1 + . ID=LTnewLM_350048200 LTnewLM_35 AUGUSTUS mRNA 1588389 1590146 1 + . ID=LTnewLM_350048200.1;Parent=LTnewLM_350048200 LTnewLM_35 AUGUSTUS CDS 1588389 1590146 1 + 0 ID=LTnewLM_350048200.1:CDS:1;Parent=LTnewLM_350048200.1 ### LTnewLM_35 . polypeptide 1588389 1590146 . + . ID=LTnewLM_350048200.1:pep;Derives_from=LTnewLM_350048200.1;orthologous_to=LmjF.35.4130_mRNA;ortholog_cluster=OG0006014;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)/Poly-adenylate binding protein%2C unique domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076|Pfam:PF00658;Ontology_term=GO:0003676,GO:0003723 LTnewLM_35 Pfam protein_match 1588416 1588619 . + . Parent=LTnewLM_350048200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1588677 1588880 . + . Parent=LTnewLM_350048200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1588941 1589129 . + . Parent=LTnewLM_350048200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1589256 1589447 . + . Parent=LTnewLM_350048200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1589931 1590122 . + . Parent=LTnewLM_350048200.1:pep;Name=PF00658;signature_desc=Poly-adenylate binding protein%2C unique domain;Ontology_term=GO:0003723 ### LTnewLM_35 AUGUSTUS gene 1596861 1597781 1 + . ID=LTnewLM_350048300 LTnewLM_35 AUGUSTUS mRNA 1596861 1597781 1 + . ID=LTnewLM_350048300.1;Parent=LTnewLM_350048300 LTnewLM_35 AUGUSTUS CDS 1596861 1597781 1 + 0 ID=LTnewLM_350048300.1:CDS:1;Parent=LTnewLM_350048300.1 ### LTnewLM_35 . polypeptide 1596861 1597781 . + . ID=LTnewLM_350048300.1:pep;Derives_from=LTnewLM_350048300.1;orthologous_to=LmjF.35.4140_mRNA;ortholog_cluster=OG0006015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1599859 1601799 1 + . ID=LTnewLM_350048400 LTnewLM_35 AUGUSTUS mRNA 1599859 1601799 1 + . ID=LTnewLM_350048400.1;Parent=LTnewLM_350048400 LTnewLM_35 AUGUSTUS CDS 1599859 1601799 1 + 0 ID=LTnewLM_350048400.1:CDS:1;Parent=LTnewLM_350048400.1 ### LTnewLM_35 . polypeptide 1599859 1601799 . + . ID=LTnewLM_350048400.1:pep;Derives_from=LTnewLM_350048400.1;orthologous_to=LmjF.35.4150_mRNA;ortholog_cluster=OG0006016;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03143;Ontology_term=GO:0003924,GO:0005525 LTnewLM_35 Pfam protein_match 1600540 1601172 . + . Parent=LTnewLM_350048400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_35 Pfam protein_match 1601458 1601781 . + . Parent=LTnewLM_350048400.1:pep;Name=PF03143;signature_desc=Elongation factor Tu C-terminal domain;Ontology_term=GO:0005525 ### LTnewLM_35 AUGUSTUS gene 1603539 1605017 1 + . ID=LTnewLM_350048500 LTnewLM_35 AUGUSTUS mRNA 1603539 1605017 1 + . ID=LTnewLM_350048500.1;Parent=LTnewLM_350048500 LTnewLM_35 AUGUSTUS CDS 1603539 1605017 1 + 0 ID=LTnewLM_350048500.1:CDS:1;Parent=LTnewLM_350048500.1 ### LTnewLM_35 . polypeptide 1603539 1605017 . + . ID=LTnewLM_350048500.1:pep;Derives_from=LTnewLM_350048500.1;orthologous_to=LmjF.35.4160_mRNA;ortholog_cluster=OG0006017;product=term%3DProtein of unknown function (DUF2009)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09418 LTnewLM_35 Pfam protein_match 1603635 1604999 . + . Parent=LTnewLM_350048500.1:pep;Name=PF09418;signature_desc=Protein of unknown function (DUF2009) ### LTnewLM_35 AUGUSTUS gene 1605845 1606939 1 + . ID=LTnewLM_350048600 LTnewLM_35 AUGUSTUS mRNA 1605845 1606939 1 + . ID=LTnewLM_350048600.1;Parent=LTnewLM_350048600 LTnewLM_35 AUGUSTUS CDS 1605845 1606939 1 + 0 ID=LTnewLM_350048600.1:CDS:1;Parent=LTnewLM_350048600.1 ### LTnewLM_35 . polypeptide 1605845 1606939 . + . ID=LTnewLM_350048600.1:pep;Derives_from=LTnewLM_350048600.1;orthologous_to=LmjF.35.4170_mRNA;ortholog_cluster=OG0006018;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1607797 1609578 1 + . ID=LTnewLM_350048700 LTnewLM_35 AUGUSTUS mRNA 1607797 1609578 1 + . ID=LTnewLM_350048700.1;Parent=LTnewLM_350048700 LTnewLM_35 AUGUSTUS CDS 1607797 1609578 1 + 0 ID=LTnewLM_350048700.1:CDS:1;Parent=LTnewLM_350048700.1 ### LTnewLM_35 . polypeptide 1607797 1609578 . + . ID=LTnewLM_350048700.1:pep;Derives_from=LTnewLM_350048700.1;orthologous_to=LmjF.35.4180_mRNA;ortholog_cluster=OG0006019;product=term%3DCiliary BBSome complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14779 LTnewLM_35 Pfam protein_match 1607845 1608591 . + . Parent=LTnewLM_350048700.1:pep;Name=PF14779;signature_desc=Ciliary BBSome complex subunit 1 ### LTnewLM_35 AUGUSTUS gene 1610386 1611078 1 + . ID=LTnewLM_350048800 LTnewLM_35 AUGUSTUS mRNA 1610386 1611078 1 + . ID=LTnewLM_350048800.1;Parent=LTnewLM_350048800 LTnewLM_35 AUGUSTUS CDS 1610386 1611078 1 + 0 ID=LTnewLM_350048800.1:CDS:1;Parent=LTnewLM_350048800.1 ### LTnewLM_35 . polypeptide 1610386 1611078 . + . ID=LTnewLM_350048800.1:pep;Derives_from=LTnewLM_350048800.1;orthologous_to=LmjF.35.4190_mRNA;ortholog_cluster=OG0006020;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1633878 1636263 0.48 + . ID=LTnewLM_350048900 LTnewLM_35 AUGUSTUS mRNA 1633878 1636263 0.48 + . ID=LTnewLM_350048900.1;Parent=LTnewLM_350048900 LTnewLM_35 AUGUSTUS CDS 1633878 1635374 0.9 + 0 ID=LTnewLM_350048900.1:CDS:1;Parent=LTnewLM_350048900.1 LTnewLM_35 AUGUSTUS CDS 1636165 1636263 0.49 + 0 ID=LTnewLM_350048900.1:CDS:2;Parent=LTnewLM_350048900.1 ### LTnewLM_35 . polypeptide 1633878 1636263 . + . ID=LTnewLM_350048900.1:pep;Derives_from=LTnewLM_350048900.1;orthologous_to=LmjF.35.4200_mRNA;ortholog_cluster=OG0006021;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1640282 1642510 1 + . ID=LTnewLM_350049000 LTnewLM_35 AUGUSTUS mRNA 1640282 1642510 1 + . ID=LTnewLM_350049000.1;Parent=LTnewLM_350049000 LTnewLM_35 AUGUSTUS CDS 1640282 1642510 1 + 0 ID=LTnewLM_350049000.1:CDS:1;Parent=LTnewLM_350049000.1 ### LTnewLM_35 . polypeptide 1640282 1642510 . + . ID=LTnewLM_350049000.1:pep;Derives_from=LTnewLM_350049000.1;orthologous_to=LmjF.35.4210_mRNA;ortholog_cluster=OG0006022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1645547 1647349 1 + . ID=LTnewLM_350049100 LTnewLM_35 AUGUSTUS mRNA 1645547 1647349 1 + . ID=LTnewLM_350049100.1;Parent=LTnewLM_350049100 LTnewLM_35 AUGUSTUS CDS 1645547 1647349 1 + 0 ID=LTnewLM_350049100.1:CDS:1;Parent=LTnewLM_350049100.1 ### LTnewLM_35 . polypeptide 1645547 1647349 . + . ID=LTnewLM_350049100.1:pep;Derives_from=LTnewLM_350049100.1;orthologous_to=LmjF.35.4220_mRNA;ortholog_cluster=OG0006023;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1651875 1654895 1 + . ID=LTnewLM_350049200 LTnewLM_35 AUGUSTUS mRNA 1651875 1654895 1 + . ID=LTnewLM_350049200.1;Parent=LTnewLM_350049200 LTnewLM_35 AUGUSTUS CDS 1651875 1654895 1 + 0 ID=LTnewLM_350049200.1:CDS:1;Parent=LTnewLM_350049200.1 ### LTnewLM_35 . polypeptide 1651875 1654895 . + . ID=LTnewLM_350049200.1:pep;Derives_from=LTnewLM_350049200.1;orthologous_to=LmjF.35.4230_mRNA;ortholog_cluster=OG0006024;product=term%3DSacI homology domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02383;Ontology_term=GO:0042578 LTnewLM_35 Pfam protein_match 1652142 1653764 . + . Parent=LTnewLM_350049200.1:pep;Name=PF02383;signature_desc=SacI homology domain;Ontology_term=GO:0042578 ### LTnewLM_35 AUGUSTUS gene 1657034 1657930 1 + . ID=LTnewLM_350049300 LTnewLM_35 AUGUSTUS mRNA 1657034 1657930 1 + . ID=LTnewLM_350049300.1;Parent=LTnewLM_350049300 LTnewLM_35 AUGUSTUS CDS 1657034 1657930 1 + 0 ID=LTnewLM_350049300.1:CDS:1;Parent=LTnewLM_350049300.1 ### LTnewLM_35 . polypeptide 1657034 1657930 . + . ID=LTnewLM_350049300.1:pep;Derives_from=LTnewLM_350049300.1;orthologous_to=LmjF.35.4240_mRNA;ortholog_cluster=OG0006025;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1667201 1668178 1 + . ID=LTnewLM_350049400 LTnewLM_35 AUGUSTUS mRNA 1667201 1668178 1 + . ID=LTnewLM_350049400.1;Parent=LTnewLM_350049400 LTnewLM_35 AUGUSTUS CDS 1667201 1668178 1 + 0 ID=LTnewLM_350049400.1:CDS:1;Parent=LTnewLM_350049400.1 ### LTnewLM_35 . polypeptide 1667201 1668178 . + . ID=LTnewLM_350049400.1:pep;Derives_from=LTnewLM_350049400.1;orthologous_to=LmjF.35.4250_mRNA;ortholog_cluster=OG0006026;product=term%3DMycolic acid cyclopropane synthetase/Ribosomal protein L11 methyltransferase (PrmA)/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02353|Pfam:PF06325|Pfam:PF13679|Pfam:PF13489|Pfam:PF13847|Pfam:PF13649|Pfam:PF08242|Pfam:PF08241;Ontology_term=GO:0005737,GO:0008152,GO:0008168,GO:0006479,GO:0008276,GO:0008610 LTnewLM_35 Pfam protein_match 1667408 1667788 . + . Parent=LTnewLM_350049400.1:pep;Name=PF02353;signature_desc=Mycolic acid cyclopropane synthetase;Ontology_term=GO:0008610 LTnewLM_35 Pfam protein_match 1667411 1667764 . + . Parent=LTnewLM_350049400.1:pep;Name=PF06325;signature_desc=Ribosomal protein L11 methyltransferase (PrmA);Ontology_term=GO:0008276,GO:0006479,GO:0005737 LTnewLM_35 Pfam protein_match 1667417 1667575 . + . Parent=LTnewLM_350049400.1:pep;Name=PF13679;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 1667417 1667917 . + . Parent=LTnewLM_350049400.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 1667423 1667773 . + . Parent=LTnewLM_350049400.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 1667429 1667746 . + . Parent=LTnewLM_350049400.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 1667432 1667752 . + . Parent=LTnewLM_350049400.1:pep;Name=PF08242;signature_desc=Methyltransferase domain LTnewLM_35 Pfam protein_match 1667432 1667755 . + . Parent=LTnewLM_350049400.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_35 AUGUSTUS gene 1669323 1670456 1 + . ID=LTnewLM_350049500 LTnewLM_35 AUGUSTUS mRNA 1669323 1670456 1 + . ID=LTnewLM_350049500.1;Parent=LTnewLM_350049500 LTnewLM_35 AUGUSTUS CDS 1669323 1670456 1 + 0 ID=LTnewLM_350049500.1:CDS:1;Parent=LTnewLM_350049500.1 ### LTnewLM_35 . polypeptide 1669323 1670456 . + . ID=LTnewLM_350049500.1:pep;Derives_from=LTnewLM_350049500.1;orthologous_to=LmjF.35.4260_mRNA;ortholog_cluster=OG0006027;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 1670262 1670441 . + . Parent=LTnewLM_350049500.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 1671985 1672494 1 + . ID=LTnewLM_350049600 LTnewLM_35 AUGUSTUS mRNA 1671985 1672494 1 + . ID=LTnewLM_350049600.1;Parent=LTnewLM_350049600 LTnewLM_35 AUGUSTUS CDS 1671985 1672494 1 + 0 ID=LTnewLM_350049600.1:CDS:1;Parent=LTnewLM_350049600.1 ### LTnewLM_35 . polypeptide 1671985 1672494 . + . ID=LTnewLM_350049600.1:pep;Derives_from=LTnewLM_350049600.1;orthologous_to=LmjF.35.4270_mRNA;ortholog_cluster=OG0006028;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1674384 1676828 1 + . ID=LTnewLM_350049700 LTnewLM_35 AUGUSTUS mRNA 1674384 1676828 1 + . ID=LTnewLM_350049700.1;Parent=LTnewLM_350049700 LTnewLM_35 AUGUSTUS CDS 1674384 1676828 1 + 0 ID=LTnewLM_350049700.1:CDS:1;Parent=LTnewLM_350049700.1 ### LTnewLM_35 . polypeptide 1674384 1676828 . + . ID=LTnewLM_350049700.1:pep;Derives_from=LTnewLM_350049700.1;orthologous_to=LmjF.35.4280_mRNA;ortholog_cluster=OG0006029;product=term%3DCentriolar protein SAS N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16531 LTnewLM_35 Pfam protein_match 1674900 1675172 . + . Parent=LTnewLM_350049700.1:pep;Name=PF16531;signature_desc=Centriolar protein SAS N-terminal ### LTnewLM_35 AUGUSTUS gene 1680835 1681812 1 + . ID=LTnewLM_350049800 LTnewLM_35 AUGUSTUS mRNA 1680835 1681812 1 + . ID=LTnewLM_350049800.1;Parent=LTnewLM_350049800 LTnewLM_35 AUGUSTUS CDS 1680835 1681812 1 + 0 ID=LTnewLM_350049800.1:CDS:1;Parent=LTnewLM_350049800.1 ### LTnewLM_35 . polypeptide 1680835 1681812 . + . ID=LTnewLM_350049800.1:pep;Derives_from=LTnewLM_350049800.1;orthologous_to=LmjF.35.4290_mRNA;ortholog_cluster=OG0006030;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1689590 1690339 1 + . ID=LTnewLM_350049900 LTnewLM_35 AUGUSTUS mRNA 1689590 1690339 1 + . ID=LTnewLM_350049900.1;Parent=LTnewLM_350049900 LTnewLM_35 AUGUSTUS CDS 1689590 1690339 1 + 0 ID=LTnewLM_350049900.1:CDS:1;Parent=LTnewLM_350049900.1 ### LTnewLM_35 . polypeptide 1689590 1690339 . + . ID=LTnewLM_350049900.1:pep;Derives_from=LTnewLM_350049900.1;orthologous_to=LmjF.35.4300_mRNA;ortholog_cluster=OG0006031;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1691252 1691677 1 + . ID=LTnewLM_350050000 LTnewLM_35 AUGUSTUS mRNA 1691252 1691677 1 + . ID=LTnewLM_350050000.1;Parent=LTnewLM_350050000 LTnewLM_35 AUGUSTUS CDS 1691252 1691677 1 + 0 ID=LTnewLM_350050000.1:CDS:1;Parent=LTnewLM_350050000.1 ### LTnewLM_35 . polypeptide 1691252 1691677 . + . ID=LTnewLM_350050000.1:pep;Derives_from=LTnewLM_350050000.1;orthologous_to=LmjF.35.4310_mRNA;ortholog_cluster=OG0006032;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1692458 1694107 1 + . ID=LTnewLM_350050100 LTnewLM_35 AUGUSTUS mRNA 1692458 1694107 1 + . ID=LTnewLM_350050100.1;Parent=LTnewLM_350050100 LTnewLM_35 AUGUSTUS CDS 1692458 1694107 1 + 0 ID=LTnewLM_350050100.1:CDS:1;Parent=LTnewLM_350050100.1 ### LTnewLM_35 . polypeptide 1692458 1694107 . + . ID=LTnewLM_350050100.1:pep;Derives_from=LTnewLM_350050100.1;orthologous_to=LmjF.35.4320_mRNA;ortholog_cluster=OG0006033;product=term%3DHaloacid dehalogenase-like hydrolase/HAD-hyrolase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13344|Pfam:PF13242 LTnewLM_35 Pfam protein_match 1693025 1693321 . + . Parent=LTnewLM_350050100.1:pep;Name=PF13344;signature_desc=Haloacid dehalogenase-like hydrolase LTnewLM_35 Pfam protein_match 1693691 1693900 . + . Parent=LTnewLM_350050100.1:pep;Name=PF13242;signature_desc=HAD-hyrolase-like ### LTnewLM_35 AUGUSTUS gene 1694655 1696562 1 + . ID=LTnewLM_350050200 LTnewLM_35 AUGUSTUS mRNA 1694655 1696562 1 + . ID=LTnewLM_350050200.1;Parent=LTnewLM_350050200 LTnewLM_35 AUGUSTUS CDS 1694655 1696562 1 + 0 ID=LTnewLM_350050200.1:CDS:1;Parent=LTnewLM_350050200.1 ### LTnewLM_35 . polypeptide 1694655 1696562 . + . ID=LTnewLM_350050200.1:pep;Derives_from=LTnewLM_350050200.1;orthologous_to=LmjF.35.4330_mRNA;ortholog_cluster=OG0006034;product=term%3DPIH1 N-terminal domain/PIH1 CS-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08190|Pfam:PF18201 LTnewLM_35 Pfam protein_match 1694844 1695335 . + . Parent=LTnewLM_350050200.1:pep;Name=PF08190;signature_desc=PIH1 N-terminal domain LTnewLM_35 Pfam protein_match 1695612 1695923 . + . Parent=LTnewLM_350050200.1:pep;Name=PF18201;signature_desc=PIH1 CS-like domain ### LTnewLM_35 AUGUSTUS gene 1697989 1699017 1 + . ID=LTnewLM_350050300 LTnewLM_35 AUGUSTUS mRNA 1697989 1699017 1 + . ID=LTnewLM_350050300.1;Parent=LTnewLM_350050300 LTnewLM_35 AUGUSTUS CDS 1697989 1699017 1 + 0 ID=LTnewLM_350050300.1:CDS:1;Parent=LTnewLM_350050300.1 ### LTnewLM_35 . polypeptide 1697989 1699017 . + . ID=LTnewLM_350050300.1:pep;Derives_from=LTnewLM_350050300.1;orthologous_to=LmjF.35.4340_mRNA;ortholog_cluster=OG0006035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1700152 1704027 1 + . ID=LTnewLM_350050400 LTnewLM_35 AUGUSTUS mRNA 1700152 1704027 1 + . ID=LTnewLM_350050400.1;Parent=LTnewLM_350050400 LTnewLM_35 AUGUSTUS CDS 1700152 1704027 1 + 0 ID=LTnewLM_350050400.1:CDS:1;Parent=LTnewLM_350050400.1 ### LTnewLM_35 . polypeptide 1700152 1704027 . + . ID=LTnewLM_350050400.1:pep;Derives_from=LTnewLM_350050400.1;orthologous_to=LmjF.35.4350_mRNA;ortholog_cluster=OG0006036;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1705380 1712288 1 + . ID=LTnewLM_350050500 LTnewLM_35 AUGUSTUS mRNA 1705380 1712288 1 + . ID=LTnewLM_350050500.1;Parent=LTnewLM_350050500 LTnewLM_35 AUGUSTUS CDS 1705380 1712288 1 + 0 ID=LTnewLM_350050500.1:CDS:1;Parent=LTnewLM_350050500.1 ### LTnewLM_35 . polypeptide 1705380 1712288 . + . ID=LTnewLM_350050500.1:pep;Derives_from=LTnewLM_350050500.1;orthologous_to=LmjF.35.4360_mRNA;ortholog_cluster=OG0006037;product=term%3DDNA polymerase family B%2C exonuclease domain/RNase_H superfamily/Predicted 3'-5' exonuclease related to the exonuclease domain of PolB/DNA polymerase family B/Domain of unknown function (DUF1744)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03104|Pfam:PF13482|Pfam:PF10108|Pfam:PF00136|Pfam:PF08490;Ontology_term=GO:0000166,GO:0008270,GO:0005634,GO:0006260,GO:0003887,GO:0003677,GO:0008408 LTnewLM_35 Pfam protein_match 1705536 1706540 . + . Parent=LTnewLM_350050500.1:pep;Name=PF03104;signature_desc=DNA polymerase family B%2C exonuclease domain;Ontology_term=GO:0008408 LTnewLM_35 Pfam protein_match 1706271 1706567 . + . Parent=LTnewLM_350050500.1:pep;Name=PF13482;signature_desc=RNase_H superfamily LTnewLM_35 Pfam protein_match 1706271 1706681 . + . Parent=LTnewLM_350050500.1:pep;Name=PF10108;signature_desc=Predicted 3'-5' exonuclease related to the exonuclease domain of PolB LTnewLM_35 Pfam protein_match 1707744 1708634 . + . Parent=LTnewLM_350050500.1:pep;Name=PF00136;signature_desc=DNA polymerase family B;Ontology_term=GO:0000166,GO:0003677 LTnewLM_35 Pfam protein_match 1710339 1711367 . + . Parent=LTnewLM_350050500.1:pep;Name=PF08490;signature_desc=Domain of unknown function (DUF1744);Ontology_term=GO:0003887,GO:0008270,GO:0006260,GO:0005634 ### LTnewLM_35 AUGUSTUS gene 1713310 1713654 1 + . ID=LTnewLM_350050600 LTnewLM_35 AUGUSTUS mRNA 1713310 1713654 1 + . ID=LTnewLM_350050600.1;Parent=LTnewLM_350050600 LTnewLM_35 AUGUSTUS CDS 1713310 1713654 1 + 0 ID=LTnewLM_350050600.1:CDS:1;Parent=LTnewLM_350050600.1 ### LTnewLM_35 . polypeptide 1713310 1713654 . + . ID=LTnewLM_350050600.1:pep;Derives_from=LTnewLM_350050600.1;orthologous_to=LmjF.35.4370_mRNA;ortholog_cluster=OG0006038;product=term%3DZinc-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13695 LTnewLM_35 Pfam protein_match 1713382 1713510 . + . Parent=LTnewLM_350050600.1:pep;Name=PF13695;signature_desc=Zinc-binding domain ### LTnewLM_35 . pseudogene 1714431 1716078 . + . ID=LTnewLM_350050700:pseudogene;coverage=0.957;sequence_ID=0.774;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.4380_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1714431 1716078 . + . ID=LTnewLM_350050700.1;Parent=LTnewLM_350050700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1714431 1716078 . + . ID=LTnewLM_350050700.1:pseudogenic_exon:1;Parent=LTnewLM_350050700.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1714431 1716078 . + . ID=LTnewLM_350050700.1:pep;Derives_from=LTnewLM_350050700.1;orthologous_to=LmjF.35.4380_pseudogenic_transcript;ortholog_cluster=OG0007674;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1717519 1718754 1 + . ID=LTnewLM_350050800 LTnewLM_35 AUGUSTUS mRNA 1717519 1718754 1 + . ID=LTnewLM_350050800.1;Parent=LTnewLM_350050800 LTnewLM_35 AUGUSTUS CDS 1717519 1718754 1 + 0 ID=LTnewLM_350050800.1:CDS:1;Parent=LTnewLM_350050800.1 ### LTnewLM_35 . polypeptide 1717519 1718754 . + . ID=LTnewLM_350050800.1:pep;Derives_from=LTnewLM_350050800.1;orthologous_to=LmjF.35.4390_mRNA;ortholog_cluster=OG0006039;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1719766 1720386 1 + . ID=LTnewLM_350050900 LTnewLM_35 AUGUSTUS mRNA 1719766 1720386 1 + . ID=LTnewLM_350050900.1;Parent=LTnewLM_350050900 LTnewLM_35 AUGUSTUS CDS 1719766 1720386 1 + 0 ID=LTnewLM_350050900.1:CDS:1;Parent=LTnewLM_350050900.1 ### LTnewLM_35 . polypeptide 1719766 1720386 . + . ID=LTnewLM_350050900.1:pep;Derives_from=LTnewLM_350050900.1;orthologous_to=LmjF.35.4400_mRNA;ortholog_cluster=OG0006040;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_35 Pfam protein_match 1719802 1720260 . + . Parent=LTnewLM_350050900.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_35 AUGUSTUS gene 1722897 1724450 1 + . ID=LTnewLM_350051000 LTnewLM_35 AUGUSTUS mRNA 1722897 1724450 1 + . ID=LTnewLM_350051000.1;Parent=LTnewLM_350051000 LTnewLM_35 AUGUSTUS CDS 1722897 1724450 1 + 0 ID=LTnewLM_350051000.1:CDS:1;Parent=LTnewLM_350051000.1 ### LTnewLM_35 . polypeptide 1722897 1724450 . + . ID=LTnewLM_350051000.1:pep;Derives_from=LTnewLM_350051000.1;orthologous_to=LmjF.35.4410_mRNA;ortholog_cluster=OG0006041;product=term%3DAmino acid permease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13520;Ontology_term=GO:0016020,GO:0015171,GO:0003333 LTnewLM_35 Pfam protein_match 1722999 1724252 . + . Parent=LTnewLM_350051000.1:pep;Name=PF13520;signature_desc=Amino acid permease;Ontology_term=GO:0015171,GO:0003333,GO:0016020 ### LTnewLM_35 . pseudogene 1724950 1725963 . + . ID=LTnewLM_350051100:pseudogene;coverage=0.997;sequence_ID=0.955;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.4420_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1724950 1725963 . + . ID=LTnewLM_350051100.1;Parent=LTnewLM_350051100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1724950 1725963 . + . ID=LTnewLM_350051100.1:pseudogenic_exon:1;Parent=LTnewLM_350051100.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1724950 1725963 . + . ID=LTnewLM_350051100.1:pep;Derives_from=LTnewLM_350051100.1;orthologous_to=LTnewLM_350051200.1,LmjF.35.4430_mRNA;ortholog_cluster=OG0000474;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_35 Pfam protein_match 1725406 1725645 . + . Parent=LTnewLM_350051100.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_35 AUGUSTUS gene 1728367 1729320 1 + . ID=LTnewLM_350051200 LTnewLM_35 AUGUSTUS mRNA 1728367 1729320 1 + . ID=LTnewLM_350051200.1;Parent=LTnewLM_350051200 LTnewLM_35 AUGUSTUS CDS 1728367 1729320 1 + 0 ID=LTnewLM_350051200.1:CDS:1;Parent=LTnewLM_350051200.1 ### LTnewLM_35 . polypeptide 1728367 1729320 . + . ID=LTnewLM_350051200.1:pep;Derives_from=LTnewLM_350051200.1;orthologous_to=LTnewLM_350051100.1,LmjF.35.4430_mRNA;ortholog_cluster=OG0000474;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_35 Pfam protein_match 1728436 1728696 . + . Parent=LTnewLM_350051200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_35 Pfam protein_match 1728751 1728990 . + . Parent=LTnewLM_350051200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_35 AUGUSTUS gene 1732371 1733087 1 + . ID=LTnewLM_350051300 LTnewLM_35 AUGUSTUS mRNA 1732371 1733087 1 + . ID=LTnewLM_350051300.1;Parent=LTnewLM_350051300 LTnewLM_35 AUGUSTUS CDS 1732371 1733087 1 + 0 ID=LTnewLM_350051300.1:CDS:1;Parent=LTnewLM_350051300.1 ### LTnewLM_35 . polypeptide 1732371 1733087 . + . ID=LTnewLM_350051300.1:pep;Derives_from=LTnewLM_350051300.1;orthologous_to=LmjF.35.4440_mRNA;ortholog_cluster=OG0006042;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1738162 1738965 1 + . ID=LTnewLM_350051400 LTnewLM_35 AUGUSTUS mRNA 1738162 1738965 1 + . ID=LTnewLM_350051400.1;Parent=LTnewLM_350051400 LTnewLM_35 AUGUSTUS CDS 1738162 1738965 1 + 0 ID=LTnewLM_350051400.1:CDS:1;Parent=LTnewLM_350051400.1 ### LTnewLM_35 . polypeptide 1738162 1738965 . + . ID=LTnewLM_350051400.1:pep;Derives_from=LTnewLM_350051400.1;orthologous_to=LmjF.35.4450_mRNA;ortholog_cluster=OG0006043;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1744379 1744609 1 + . ID=LTnewLM_350051500 LTnewLM_35 AUGUSTUS mRNA 1744379 1744609 1 + . ID=LTnewLM_350051500.1;Parent=LTnewLM_350051500 LTnewLM_35 AUGUSTUS CDS 1744379 1744609 1 + 0 ID=LTnewLM_350051500.1:CDS:1;Parent=LTnewLM_350051500.1 ### LTnewLM_35 . polypeptide 1744379 1744609 . + . ID=LTnewLM_350051500.1:pep;Derives_from=LTnewLM_350051500.1;orthologous_to=LmjF.35.4460_mRNA;ortholog_cluster=OG0006044;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_35 Pfam protein_match 1744403 1744585 . + . Parent=LTnewLM_350051500.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_35 AUGUSTUS gene 1745626 1746225 1 + . ID=LTnewLM_350051600 LTnewLM_35 AUGUSTUS mRNA 1745626 1746225 1 + . ID=LTnewLM_350051600.1;Parent=LTnewLM_350051600 LTnewLM_35 AUGUSTUS CDS 1745626 1746225 1 + 0 ID=LTnewLM_350051600.1:CDS:1;Parent=LTnewLM_350051600.1 ### LTnewLM_35 . polypeptide 1745626 1746225 . + . ID=LTnewLM_350051600.1:pep;Derives_from=LTnewLM_350051600.1;orthologous_to=LmjF.35.4470_mRNA;ortholog_cluster=OG0006045;product=term%3DCS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04969 LTnewLM_35 Pfam protein_match 1745641 1745871 . + . Parent=LTnewLM_350051600.1:pep;Name=PF04969;signature_desc=CS domain ### LTnewLM_35 AUGUSTUS gene 1747614 1748186 1 + . ID=LTnewLM_350051700 LTnewLM_35 AUGUSTUS mRNA 1747614 1748186 1 + . ID=LTnewLM_350051700.1;Parent=LTnewLM_350051700 LTnewLM_35 AUGUSTUS CDS 1747614 1748186 1 + 0 ID=LTnewLM_350051700.1:CDS:1;Parent=LTnewLM_350051700.1 ### LTnewLM_35 . polypeptide 1747614 1748186 . + . ID=LTnewLM_350051700.1:pep;Derives_from=LTnewLM_350051700.1;orthologous_to=LmjF.35.4480_mRNA;ortholog_cluster=OG0006046;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1749760 1754211 1 + . ID=LTnewLM_350051800 LTnewLM_35 AUGUSTUS mRNA 1749760 1754211 1 + . ID=LTnewLM_350051800.1;Parent=LTnewLM_350051800 LTnewLM_35 AUGUSTUS CDS 1749760 1754211 1 + 0 ID=LTnewLM_350051800.1:CDS:1;Parent=LTnewLM_350051800.1 ### LTnewLM_35 . polypeptide 1749760 1754211 . + . ID=LTnewLM_350051800.1:pep;Derives_from=LTnewLM_350051800.1;orthologous_to=LmjF.35.4490_mRNA;ortholog_cluster=OG0006047;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1755564 1755812 1 + . ID=LTnewLM_350051900 LTnewLM_35 AUGUSTUS mRNA 1755564 1755812 1 + . ID=LTnewLM_350051900.1;Parent=LTnewLM_350051900 LTnewLM_35 AUGUSTUS CDS 1755564 1755812 1 + 0 ID=LTnewLM_350051900.1:CDS:1;Parent=LTnewLM_350051900.1 ### LTnewLM_35 . polypeptide 1755564 1755812 . + . ID=LTnewLM_350051900.1:pep;Derives_from=LTnewLM_350051900.1;orthologous_to=LmjF.35.4500_mRNA;ortholog_cluster=OG0006048;product=term%3DAnaphase-promoting complex subunit 11 RING-H2 finger/RING-H2 zinc finger domain/RING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12861|Pfam:PF12678|Pfam:PF13445|Pfam:PF00097;Ontology_term=GO:0005680,GO:0046872,GO:0004842,GO:0008270 LTnewLM_35 Pfam protein_match 1755564 1755803 . + . Parent=LTnewLM_350051900.1:pep;Name=PF12861;signature_desc=Anaphase-promoting complex subunit 11 RING-H2 finger;Ontology_term=GO:0004842,GO:0005680 LTnewLM_35 Pfam protein_match 1755624 1755791 . + . Parent=LTnewLM_350051900.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 LTnewLM_35 Pfam protein_match 1755630 1755782 . + . Parent=LTnewLM_350051900.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_35 Pfam protein_match 1755630 1755788 . + . Parent=LTnewLM_350051900.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 1756524 1757219 1 + . ID=LTnewLM_350052000 LTnewLM_35 AUGUSTUS mRNA 1756524 1757219 1 + . ID=LTnewLM_350052000.1;Parent=LTnewLM_350052000 LTnewLM_35 AUGUSTUS CDS 1756524 1757219 1 + 0 ID=LTnewLM_350052000.1:CDS:1;Parent=LTnewLM_350052000.1 ### LTnewLM_35 . polypeptide 1756524 1757219 . + . ID=LTnewLM_350052000.1:pep;Derives_from=LTnewLM_350052000.1;orthologous_to=LmjF.35.4510_mRNA;ortholog_cluster=OG0006049;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1758301 1758957 1 + . ID=LTnewLM_350052100 LTnewLM_35 AUGUSTUS mRNA 1758301 1758957 1 + . ID=LTnewLM_350052100.1;Parent=LTnewLM_350052100 LTnewLM_35 AUGUSTUS CDS 1758301 1758957 1 + 0 ID=LTnewLM_350052100.1:CDS:1;Parent=LTnewLM_350052100.1 ### LTnewLM_35 . polypeptide 1758301 1758957 . + . ID=LTnewLM_350052100.1:pep;Derives_from=LTnewLM_350052100.1;orthologous_to=LmjF.35.4520_mRNA;ortholog_cluster=OG0006050;product=term%3D2-hydroxy-palmitic acid dioxygenase Mpo1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06127 LTnewLM_35 Pfam protein_match 1758325 1758741 . + . Parent=LTnewLM_350052100.1:pep;Name=PF06127;signature_desc=2-hydroxy-palmitic acid dioxygenase Mpo1-like ### LTnewLM_35 AUGUSTUS gene 1759898 1762054 1 + . ID=LTnewLM_350052200 LTnewLM_35 AUGUSTUS mRNA 1759898 1762054 1 + . ID=LTnewLM_350052200.1;Parent=LTnewLM_350052200 LTnewLM_35 AUGUSTUS CDS 1759898 1762054 1 + 0 ID=LTnewLM_350052200.1:CDS:1;Parent=LTnewLM_350052200.1 ### LTnewLM_35 . polypeptide 1759898 1762054 . + . ID=LTnewLM_350052200.1:pep;Derives_from=LTnewLM_350052200.1;orthologous_to=LmjF.35.4530_mRNA;ortholog_cluster=OG0006051;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1763857 1766634 1 + . ID=LTnewLM_350052300 LTnewLM_35 AUGUSTUS mRNA 1763857 1766634 1 + . ID=LTnewLM_350052300.1;Parent=LTnewLM_350052300 LTnewLM_35 AUGUSTUS CDS 1763857 1766634 1 + 0 ID=LTnewLM_350052300.1:CDS:1;Parent=LTnewLM_350052300.1 ### LTnewLM_35 . polypeptide 1763857 1766634 . + . ID=LTnewLM_350052300.1:pep;Derives_from=LTnewLM_350052300.1;orthologous_to=LmjF.35.4540_mRNA;ortholog_cluster=OG0006052;product=term%3DUncharacterised conserved protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09758 LTnewLM_35 Pfam protein_match 1764016 1764456 . + . Parent=LTnewLM_350052300.1:pep;Name=PF09758;signature_desc=Uncharacterised conserved protein ### LTnewLM_35 AUGUSTUS gene 1768189 1772628 1 + . ID=LTnewLM_350052400 LTnewLM_35 AUGUSTUS mRNA 1768189 1772628 1 + . ID=LTnewLM_350052400.1;Parent=LTnewLM_350052400 LTnewLM_35 AUGUSTUS CDS 1768189 1772628 1 + 0 ID=LTnewLM_350052400.1:CDS:1;Parent=LTnewLM_350052400.1 ### LTnewLM_35 . polypeptide 1768189 1772628 . + . ID=LTnewLM_350052400.1:pep;Derives_from=LTnewLM_350052400.1;orthologous_to=LmjF.35.4550_mRNA;ortholog_cluster=OG0006053;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1768783 1768902 . + . Parent=LTnewLM_350052400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1769140 1769799 . + . Parent=LTnewLM_350052400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1771447 1771584 . + . Parent=LTnewLM_350052400.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_35 . pseudogene 1773860 1775180 . + . ID=LTnewLM_350052500:pseudogene;coverage=0.972;sequence_ID=0.891;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.4560_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1773860 1775180 . + . ID=LTnewLM_350052500.1;Parent=LTnewLM_350052500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1773860 1775180 . + . ID=LTnewLM_350052500.1:pseudogenic_exon:1;Parent=LTnewLM_350052500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1773860 1775180 . + . ID=LTnewLM_350052500.1:pep;Derives_from=LTnewLM_350052500.1;orthologous_to=LmjF.35.4560_mRNA;ortholog_cluster=OG0007675;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1775822 1776244 705 + . ID=LTnewLM_350052600:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.35.4570:mRNA 1 141;original_prot_length=141 LTnewLM_35 . pseudogenic_transcript 1775822 1776244 . + . ID=LTnewLM_350052600.1;Parent=LTnewLM_350052600:pseudogene LTnewLM_35 . pseudogenic_exon 1775822 1776244 . + . ID=LTnewLM_350052600.1:pseudogenic_exon:1;Parent=LTnewLM_350052600.1 ### LTnewLM_35 . polypeptide 1775822 1776244 . + . ID=LTnewLM_350052600.1:pep;Derives_from=LTnewLM_350052600.1;orthologous_to=LmjF.35.4570_mRNA;ortholog_cluster=OG0007676;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1776802 1778487 1 + . ID=LTnewLM_350052700 LTnewLM_35 AUGUSTUS mRNA 1776802 1778487 1 + . ID=LTnewLM_350052700.1;Parent=LTnewLM_350052700 LTnewLM_35 AUGUSTUS CDS 1776802 1778487 1 + 0 ID=LTnewLM_350052700.1:CDS:1;Parent=LTnewLM_350052700.1 ### LTnewLM_35 . polypeptide 1776802 1778487 . + . ID=LTnewLM_350052700.1:pep;Derives_from=LTnewLM_350052700.1;orthologous_to=LmjF.35.4580_mRNA;ortholog_cluster=OG0006054;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1779217 1780275 1 + . ID=LTnewLM_350052800 LTnewLM_35 AUGUSTUS mRNA 1779217 1780275 1 + . ID=LTnewLM_350052800.1;Parent=LTnewLM_350052800 LTnewLM_35 AUGUSTUS CDS 1779217 1780275 1 + 0 ID=LTnewLM_350052800.1:CDS:1;Parent=LTnewLM_350052800.1 ### LTnewLM_35 . polypeptide 1779217 1780275 . + . ID=LTnewLM_350052800.1:pep;Derives_from=LTnewLM_350052800.1;orthologous_to=LmjF.35.4590_mRNA;ortholog_cluster=OG0006055;product=term%3DPhosphatidylserine decarboxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02666;Ontology_term=GO:0008654,GO:0004609 LTnewLM_35 Pfam protein_match 1779598 1780263 . + . Parent=LTnewLM_350052800.1:pep;Name=PF02666;signature_desc=Phosphatidylserine decarboxylase;Ontology_term=GO:0004609,GO:0008654 ### LTnewLM_35 AUGUSTUS gene 1781190 1782728 1 + . ID=LTnewLM_350052900 LTnewLM_35 AUGUSTUS mRNA 1781190 1782728 1 + . ID=LTnewLM_350052900.1;Parent=LTnewLM_350052900 LTnewLM_35 AUGUSTUS CDS 1781190 1782728 1 + 0 ID=LTnewLM_350052900.1:CDS:1;Parent=LTnewLM_350052900.1 ### LTnewLM_35 . polypeptide 1781190 1782728 . + . ID=LTnewLM_350052900.1:pep;Derives_from=LTnewLM_350052900.1;orthologous_to=LmjF.35.4600_mRNA;ortholog_cluster=OG0006056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1783738 1784601 1 + . ID=LTnewLM_350053000 LTnewLM_35 AUGUSTUS mRNA 1783738 1784601 1 + . ID=LTnewLM_350053000.1;Parent=LTnewLM_350053000 LTnewLM_35 AUGUSTUS CDS 1783738 1784601 1 + 0 ID=LTnewLM_350053000.1:CDS:1;Parent=LTnewLM_350053000.1 ### LTnewLM_35 . polypeptide 1783738 1784601 . + . ID=LTnewLM_350053000.1:pep;Derives_from=LTnewLM_350053000.1;orthologous_to=LmjF.35.4610_mRNA;ortholog_cluster=OG0006057;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1785256 1786122 1 + . ID=LTnewLM_350053100 LTnewLM_35 AUGUSTUS mRNA 1785256 1786122 1 + . ID=LTnewLM_350053100.1;Parent=LTnewLM_350053100 LTnewLM_35 AUGUSTUS CDS 1785256 1786122 1 + 0 ID=LTnewLM_350053100.1:CDS:1;Parent=LTnewLM_350053100.1 ### LTnewLM_35 . polypeptide 1785256 1786122 . + . ID=LTnewLM_350053100.1:pep;Derives_from=LTnewLM_350053100.1;orthologous_to=LmjF.35.4620_mRNA;ortholog_cluster=OG0006058;product=term%3DProtein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 1785748 1785996 . + . Parent=LTnewLM_350053100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 1788370 1789845 1 + . ID=LTnewLM_350053200 LTnewLM_35 AUGUSTUS mRNA 1788370 1789845 1 + . ID=LTnewLM_350053200.1;Parent=LTnewLM_350053200 LTnewLM_35 AUGUSTUS CDS 1788370 1789845 1 + 0 ID=LTnewLM_350053200.1:CDS:1;Parent=LTnewLM_350053200.1 ### LTnewLM_35 . polypeptide 1788370 1789845 . + . ID=LTnewLM_350053200.1:pep;Derives_from=LTnewLM_350053200.1;orthologous_to=LmjF.35.4630_mRNA;ortholog_cluster=OG0006059;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_35 Pfam protein_match 1788769 1788933 . + . Parent=LTnewLM_350053200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_35 AUGUSTUS gene 1791302 1791646 1 + . ID=LTnewLM_350053300 LTnewLM_35 AUGUSTUS mRNA 1791302 1791646 1 + . ID=LTnewLM_350053300.1;Parent=LTnewLM_350053300 LTnewLM_35 AUGUSTUS CDS 1791302 1791646 1 + 0 ID=LTnewLM_350053300.1:CDS:1;Parent=LTnewLM_350053300.1 ### LTnewLM_35 . polypeptide 1791302 1791646 . + . ID=LTnewLM_350053300.1:pep;Derives_from=LTnewLM_350053300.1;orthologous_to=LmjF.35.4640_mRNA;ortholog_cluster=OG0006060;product=term%3DCgr1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03879 LTnewLM_35 Pfam protein_match 1791335 1791613 . + . Parent=LTnewLM_350053300.1:pep;Name=PF03879;signature_desc=Cgr1 family ### LTnewLM_35 AUGUSTUS gene 1793258 1794355 1 + . ID=LTnewLM_350053400 LTnewLM_35 AUGUSTUS mRNA 1793258 1794355 1 + . ID=LTnewLM_350053400.1;Parent=LTnewLM_350053400 LTnewLM_35 AUGUSTUS CDS 1793258 1794355 1 + 0 ID=LTnewLM_350053400.1:CDS:1;Parent=LTnewLM_350053400.1 ### LTnewLM_35 . polypeptide 1793258 1794355 . + . ID=LTnewLM_350053400.1:pep;Derives_from=LTnewLM_350053400.1;orthologous_to=LmjF.35.4650_mRNA;ortholog_cluster=OG0006061;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_35 Pfam protein_match 1793909 1794307 . + . Parent=LTnewLM_350053400.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_35 AUGUSTUS gene 1795941 1797344 1 + . ID=LTnewLM_350053500 LTnewLM_35 AUGUSTUS mRNA 1795941 1797344 1 + . ID=LTnewLM_350053500.1;Parent=LTnewLM_350053500 LTnewLM_35 AUGUSTUS CDS 1795941 1797344 1 + 0 ID=LTnewLM_350053500.1:CDS:1;Parent=LTnewLM_350053500.1 ### LTnewLM_35 . polypeptide 1795941 1797344 . + . ID=LTnewLM_350053500.1:pep;Derives_from=LTnewLM_350053500.1;orthologous_to=LmjF.35.4660_mRNA;ortholog_cluster=OG0006062;product=term%3DsnRNA-activating protein complex (SNAPc)%2C subunit 3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12251 LTnewLM_35 Pfam protein_match 1796718 1797293 . + . Parent=LTnewLM_350053500.1:pep;Name=PF12251;signature_desc=snRNA-activating protein complex (SNAPc)%2C subunit 3 ### LTnewLM_35 AUGUSTUS gene 1798233 1800002 1 + . ID=LTnewLM_350053600 LTnewLM_35 AUGUSTUS mRNA 1798233 1800002 1 + . ID=LTnewLM_350053600.1;Parent=LTnewLM_350053600 LTnewLM_35 AUGUSTUS CDS 1798233 1800002 1 + 0 ID=LTnewLM_350053600.1:CDS:1;Parent=LTnewLM_350053600.1 ### LTnewLM_35 . polypeptide 1798233 1800002 . + . ID=LTnewLM_350053600.1:pep;Derives_from=LTnewLM_350053600.1;orthologous_to=LmjF.35.4670_mRNA;ortholog_cluster=OG0006063;product=term%3DWD domain%2C G-beta repeat/Anaphase-promoting complex subunit 4 WD40 domain/con80 domain of Katanin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400|Pfam:PF12894|Pfam:PF13925;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1798494 1798604 . + . Parent=LTnewLM_350053600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1798596 1798796 . + . Parent=LTnewLM_350053600.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_35 Pfam protein_match 1798653 1798730 . + . Parent=LTnewLM_350053600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1798743 1798856 . + . Parent=LTnewLM_350053600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1799487 1799969 . + . Parent=LTnewLM_350053600.1:pep;Name=PF13925;signature_desc=con80 domain of Katanin ### LTnewLM_35 Liftoff gene 1801740 1802066 . + . ID=LTnewLM_350053700;coverage=1.0;sequence_ID=0.874;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.4680_0 LTnewLM_35 Liftoff mRNA 1801740 1802066 . + . ID=LTnewLM_350053700.1;Parent=LTnewLM_350053700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1801740 1802066 . + 0 ID=LTnewLM_350053700.1:CDS:1;Parent=LTnewLM_350053700.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1801740 1802066 . + . ID=LTnewLM_350053700.1:pep;Derives_from=LTnewLM_350053700.1;orthologous_to=LmjF.35.4680_mRNA;ortholog_cluster=OG0006064;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1803201 1804145 1 + . ID=LTnewLM_350053800 LTnewLM_35 AUGUSTUS mRNA 1803201 1804145 1 + . ID=LTnewLM_350053800.1;Parent=LTnewLM_350053800 LTnewLM_35 AUGUSTUS CDS 1803201 1804145 1 + 0 ID=LTnewLM_350053800.1:CDS:1;Parent=LTnewLM_350053800.1 ### LTnewLM_35 . polypeptide 1803201 1804145 . + . ID=LTnewLM_350053800.1:pep;Derives_from=LTnewLM_350053800.1;orthologous_to=LmjF.35.4690_mRNA;ortholog_cluster=OG0006065;product=term%3DParkin co-regulated protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10274 LTnewLM_35 Pfam protein_match 1803588 1804133 . + . Parent=LTnewLM_350053800.1:pep;Name=PF10274;signature_desc=Parkin co-regulated protein ### LTnewLM_35 AUGUSTUS gene 1805090 1806532 1 + . ID=LTnewLM_350053900 LTnewLM_35 AUGUSTUS mRNA 1805090 1806532 1 + . ID=LTnewLM_350053900.1;Parent=LTnewLM_350053900 LTnewLM_35 AUGUSTUS CDS 1805090 1806532 1 + 0 ID=LTnewLM_350053900.1:CDS:1;Parent=LTnewLM_350053900.1 ### LTnewLM_35 . polypeptide 1805090 1806532 . + . ID=LTnewLM_350053900.1:pep;Derives_from=LTnewLM_350053900.1;orthologous_to=LmjF.35.4700_mRNA;ortholog_cluster=OG0006066;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_35 Pfam protein_match 1805384 1806190 . + . Parent=LTnewLM_350053900.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_35 Pfam protein_match 1805429 1805545 . + . Parent=LTnewLM_350053900.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_35 AUGUSTUS gene 1807459 1809633 1 + . ID=LTnewLM_350054000 LTnewLM_35 AUGUSTUS mRNA 1807459 1809633 1 + . ID=LTnewLM_350054000.1;Parent=LTnewLM_350054000 LTnewLM_35 AUGUSTUS CDS 1807459 1809633 1 + 0 ID=LTnewLM_350054000.1:CDS:1;Parent=LTnewLM_350054000.1 ### LTnewLM_35 . polypeptide 1807459 1809633 . + . ID=LTnewLM_350054000.1:pep;Derives_from=LTnewLM_350054000.1;orthologous_to=LmjF.35.4710_mRNA;ortholog_cluster=OG0006067;product=term%3DHsp70 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00012 LTnewLM_35 Pfam protein_match 1807537 1809564 . + . Parent=LTnewLM_350054000.1:pep;Name=PF00012;signature_desc=Hsp70 protein ### LTnewLM_35 AUGUSTUS gene 1810618 1811034 1 + . ID=LTnewLM_350054100 LTnewLM_35 AUGUSTUS mRNA 1810618 1811034 1 + . ID=LTnewLM_350054100.1;Parent=LTnewLM_350054100 LTnewLM_35 AUGUSTUS CDS 1810618 1811034 1 + 0 ID=LTnewLM_350054100.1:CDS:1;Parent=LTnewLM_350054100.1 ### LTnewLM_35 . polypeptide 1810618 1811034 . + . ID=LTnewLM_350054100.1:pep;Derives_from=LTnewLM_350054100.1;orthologous_to=LmjF.35.4720_mRNA;ortholog_cluster=OG0006068;product=term%3DGlycine cleavage H-protein/Biotin-requiring enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01597|Pfam:PF00364 LTnewLM_35 Pfam protein_match 1810684 1811025 . + . Parent=LTnewLM_350054100.1:pep;Name=PF01597;signature_desc=Glycine cleavage H-protein LTnewLM_35 Pfam protein_match 1810789 1810899 . + . Parent=LTnewLM_350054100.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme ### LTnewLM_35 AUGUSTUS gene 1812787 1813408 0.77 + . ID=LTnewLM_350054200 LTnewLM_35 AUGUSTUS mRNA 1812787 1813408 0.77 + . ID=LTnewLM_350054200.1;Parent=LTnewLM_350054200 LTnewLM_35 AUGUSTUS CDS 1812787 1812824 0.98 + 0 ID=LTnewLM_350054200.1:CDS:1;Parent=LTnewLM_350054200.1 LTnewLM_35 AUGUSTUS CDS 1812877 1813408 0.77 + 1 ID=LTnewLM_350054200.1:CDS:2;Parent=LTnewLM_350054200.1 ### LTnewLM_35 . polypeptide 1812787 1813408 . + . ID=LTnewLM_350054200.1:pep;Derives_from=LTnewLM_350054200.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 1814240 1815289 1 + . ID=LTnewLM_350054300 LTnewLM_35 AUGUSTUS mRNA 1814240 1815289 1 + . ID=LTnewLM_350054300.1;Parent=LTnewLM_350054300 LTnewLM_35 AUGUSTUS CDS 1814240 1815289 1 + 0 ID=LTnewLM_350054300.1:CDS:1;Parent=LTnewLM_350054300.1 ### LTnewLM_35 . polypeptide 1814240 1815289 . + . ID=LTnewLM_350054300.1:pep;Derives_from=LTnewLM_350054300.1;orthologous_to=LmjF.35.4750_mRNA;ortholog_cluster=OG0006069;product=term%3DGlyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain/Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00044|Pfam:PF02800;Ontology_term=GO:0055114,GO:0016620 LTnewLM_35 Pfam protein_match 1814249 1814560 . + . Parent=LTnewLM_350054300.1:pep;Name=PF00044;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016620,GO:0055114 LTnewLM_35 Pfam protein_match 1814723 1815202 . + . Parent=LTnewLM_350054300.1:pep;Name=PF02800;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016620,GO:0055114 ### LTnewLM_35 AUGUSTUS gene 1816569 1817015 1 + . ID=LTnewLM_350054400 LTnewLM_35 AUGUSTUS mRNA 1816569 1817015 1 + . ID=LTnewLM_350054400.1;Parent=LTnewLM_350054400 LTnewLM_35 AUGUSTUS CDS 1816569 1817015 1 + 0 ID=LTnewLM_350054400.1:CDS:1;Parent=LTnewLM_350054400.1 ### LTnewLM_35 . polypeptide 1816569 1817015 . + . ID=LTnewLM_350054400.1:pep;Derives_from=LTnewLM_350054400.1;orthologous_to=LmjF.35.4760_mRNA;ortholog_cluster=OG0006070;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1818801 1819865 1 + . ID=LTnewLM_350054500 LTnewLM_35 AUGUSTUS mRNA 1818801 1819865 1 + . ID=LTnewLM_350054500.1;Parent=LTnewLM_350054500 LTnewLM_35 AUGUSTUS CDS 1818801 1819865 1 + 0 ID=LTnewLM_350054500.1:CDS:1;Parent=LTnewLM_350054500.1 ### LTnewLM_35 . polypeptide 1818801 1819865 . + . ID=LTnewLM_350054500.1:pep;Derives_from=LTnewLM_350054500.1;orthologous_to=LmjF.35.4770_mRNA;ortholog_cluster=OG0006071;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_35 Pfam protein_match 1818822 1819316 . + . Parent=LTnewLM_350054500.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_35 AUGUSTUS gene 1821103 1821957 1 + . ID=LTnewLM_350054600 LTnewLM_35 AUGUSTUS mRNA 1821103 1821957 1 + . ID=LTnewLM_350054600.1;Parent=LTnewLM_350054600 LTnewLM_35 AUGUSTUS CDS 1821103 1821957 1 + 0 ID=LTnewLM_350054600.1:CDS:1;Parent=LTnewLM_350054600.1 ### LTnewLM_35 . polypeptide 1821103 1821957 . + . ID=LTnewLM_350054600.1:pep;Derives_from=LTnewLM_350054600.1;orthologous_to=LmjF.35.4780_mRNA;ortholog_cluster=OG0006072;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1822572 1823234 1 + . ID=LTnewLM_350054700 LTnewLM_35 AUGUSTUS mRNA 1822572 1823234 1 + . ID=LTnewLM_350054700.1;Parent=LTnewLM_350054700 LTnewLM_35 AUGUSTUS CDS 1822572 1823234 1 + 0 ID=LTnewLM_350054700.1:CDS:1;Parent=LTnewLM_350054700.1 ### LTnewLM_35 . polypeptide 1822572 1823234 . + . ID=LTnewLM_350054700.1:pep;Derives_from=LTnewLM_350054700.1;orthologous_to=LmjF.35.4790_mRNA;ortholog_cluster=OG0006073;product=term%3DSCAMP family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04144;Ontology_term=GO:0015031,GO:0016021 LTnewLM_35 Pfam protein_match 1822680 1823183 . + . Parent=LTnewLM_350054700.1:pep;Name=PF04144;signature_desc=SCAMP family;Ontology_term=GO:0015031,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1825023 1829465 1 + . ID=LTnewLM_350054800 LTnewLM_35 AUGUSTUS mRNA 1825023 1829465 1 + . ID=LTnewLM_350054800.1;Parent=LTnewLM_350054800 LTnewLM_35 AUGUSTUS CDS 1825023 1829465 1 + 0 ID=LTnewLM_350054800.1:CDS:1;Parent=LTnewLM_350054800.1 ### LTnewLM_35 . polypeptide 1825023 1829465 . + . ID=LTnewLM_350054800.1:pep;Derives_from=LTnewLM_350054800.1;orthologous_to=LmjF.13.0980_mRNA,LmjF.35.4800_mRNA;ortholog_cluster=OG0000475;product=term%3DAMP deaminase/Adenosine deaminase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19326|Pfam:PF00962;Ontology_term=GO:0019239 LTnewLM_35 Pfam protein_match 1825419 1827005 . + . Parent=LTnewLM_350054800.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_35 Pfam protein_match 1827267 1828886 . + . Parent=LTnewLM_350054800.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_35 Pfam protein_match 1828386 1828742 . + . Parent=LTnewLM_350054800.1:pep;Name=PF00962;signature_desc=Adenosine deaminase;Ontology_term=GO:0019239 ### LTnewLM_35 . pseudogene 1830659 1831816 . + . ID=LTnewLM_350054900:pseudogene;coverage=1.0;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.4810_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1830659 1831816 . + . ID=LTnewLM_350054900.1;Parent=LTnewLM_350054900:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1830659 1831816 . + . ID=LTnewLM_350054900.1:pseudogenic_exon:1;Parent=LTnewLM_350054900.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1830659 1831816 . + . ID=LTnewLM_350054900.1:pep;Derives_from=LTnewLM_350054900.1;orthologous_to=LmjF.35.4810_mRNA;ortholog_cluster=OG0007677;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1834300 1835307 1 + . ID=LTnewLM_350055000 LTnewLM_35 AUGUSTUS mRNA 1834300 1835307 1 + . ID=LTnewLM_350055000.1;Parent=LTnewLM_350055000 LTnewLM_35 AUGUSTUS CDS 1834300 1835307 1 + 0 ID=LTnewLM_350055000.1:CDS:1;Parent=LTnewLM_350055000.1 ### LTnewLM_35 . polypeptide 1834300 1835307 . + . ID=LTnewLM_350055000.1:pep;Derives_from=LTnewLM_350055000.1;orthologous_to=LmjF.35.4820_mRNA;ortholog_cluster=OG0006074;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1836777 1838174 1 + . ID=LTnewLM_350055100 LTnewLM_35 AUGUSTUS mRNA 1836777 1838174 1 + . ID=LTnewLM_350055100.1;Parent=LTnewLM_350055100 LTnewLM_35 AUGUSTUS CDS 1836777 1838174 1 + 0 ID=LTnewLM_350055100.1:CDS:1;Parent=LTnewLM_350055100.1 ### LTnewLM_35 . polypeptide 1836777 1838174 . + . ID=LTnewLM_350055100.1:pep;Derives_from=LTnewLM_350055100.1;orthologous_to=LmjF.35.4830_mRNA;ortholog_cluster=OG0006075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1839033 1839803 . + . ID=LTnewLM_350055200;coverage=1.0;sequence_ID=0.946;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.4840_0 LTnewLM_35 Liftoff mRNA 1839033 1839803 . + . ID=LTnewLM_350055200.1;Parent=LTnewLM_350055200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1839033 1839803 . + 0 ID=LTnewLM_350055200.1:CDS:1;Parent=LTnewLM_350055200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1839033 1839803 . + . ID=LTnewLM_350055200.1:pep;Derives_from=LTnewLM_350055200.1;orthologous_to=LmjF.35.4840_mRNA;ortholog_cluster=OG0006076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1843388 1844140 1 + . ID=LTnewLM_350055300 LTnewLM_35 AUGUSTUS mRNA 1843388 1844140 1 + . ID=LTnewLM_350055300.1;Parent=LTnewLM_350055300 LTnewLM_35 AUGUSTUS CDS 1843388 1844140 1 + 0 ID=LTnewLM_350055300.1:CDS:1;Parent=LTnewLM_350055300.1 ### LTnewLM_35 . polypeptide 1843388 1844140 . + . ID=LTnewLM_350055300.1:pep;Derives_from=LTnewLM_350055300.1;orthologous_to=LmjF.35.4850_mRNA;ortholog_cluster=OG0006077;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_35 Pfam protein_match 1843403 1843468 . + . Parent=LTnewLM_350055300.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 LTnewLM_35 Pfam protein_match 1843493 1844050 . + . Parent=LTnewLM_350055300.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_35 AUGUSTUS gene 1845759 1846808 1 + . ID=LTnewLM_350055400 LTnewLM_35 AUGUSTUS mRNA 1845759 1846808 1 + . ID=LTnewLM_350055400.1;Parent=LTnewLM_350055400 LTnewLM_35 AUGUSTUS CDS 1845759 1846808 1 + 0 ID=LTnewLM_350055400.1:CDS:1;Parent=LTnewLM_350055400.1 ### LTnewLM_35 . polypeptide 1845759 1846808 . + . ID=LTnewLM_350055400.1:pep;Derives_from=LTnewLM_350055400.1;orthologous_to=LmjF.35.4860_mRNA;ortholog_cluster=OG0006078;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1848224 1851226 1 + . ID=LTnewLM_350055500 LTnewLM_35 AUGUSTUS mRNA 1848224 1851226 1 + . ID=LTnewLM_350055500.1;Parent=LTnewLM_350055500 LTnewLM_35 AUGUSTUS CDS 1848224 1851226 1 + 0 ID=LTnewLM_350055500.1:CDS:1;Parent=LTnewLM_350055500.1 ### LTnewLM_35 . polypeptide 1848224 1851226 . + . ID=LTnewLM_350055500.1:pep;Derives_from=LTnewLM_350055500.1;orthologous_to=LmjF.35.4870_mRNA;ortholog_cluster=OG0006079;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1852369 1853517 1 + . ID=LTnewLM_350055600 LTnewLM_35 AUGUSTUS mRNA 1852369 1853517 1 + . ID=LTnewLM_350055600.1;Parent=LTnewLM_350055600 LTnewLM_35 AUGUSTUS CDS 1852369 1853517 1 + 0 ID=LTnewLM_350055600.1:CDS:1;Parent=LTnewLM_350055600.1 ### LTnewLM_35 . polypeptide 1852369 1853517 . + . ID=LTnewLM_350055600.1:pep;Derives_from=LTnewLM_350055600.1;orthologous_to=LmjF.35.4880_mRNA;ortholog_cluster=OG0006080;product=term%3DTetratricopeptide repeat/TPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07719|Pfam:PF13181|Pfam:PF13414;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1852384 1852482 . + . Parent=LTnewLM_350055600.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_35 Pfam protein_match 1852405 1852479 . + . Parent=LTnewLM_350055600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1852405 1852524 . + . Parent=LTnewLM_350055600.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_35 Pfam protein_match 1852492 1852578 . + . Parent=LTnewLM_350055600.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1854921 1856009 1 + . ID=LTnewLM_350055700 LTnewLM_35 AUGUSTUS mRNA 1854921 1856009 1 + . ID=LTnewLM_350055700.1;Parent=LTnewLM_350055700 LTnewLM_35 AUGUSTUS CDS 1854921 1856009 1 + 0 ID=LTnewLM_350055700.1:CDS:1;Parent=LTnewLM_350055700.1 ### LTnewLM_35 . polypeptide 1854921 1856009 . + . ID=LTnewLM_350055700.1:pep;Derives_from=LTnewLM_350055700.1;orthologous_to=LmjF.35.4890_mRNA;ortholog_cluster=OG0006081;product=term%3DHelix-hairpin-helix domain/Rad51/recA bacterial DNA recombination protein/KaiC%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14520|Pfam:PF08423|Pfam:PF00154|Pfam:PF06745;Ontology_term=GO:0003697,GO:0006281,GO:0009432,GO:0005524 LTnewLM_35 Pfam protein_match 1855080 1855220 . + . Parent=LTnewLM_350055700.1:pep;Name=PF14520;signature_desc=Helix-hairpin-helix domain LTnewLM_35 Pfam protein_match 1855236 1855997 . + . Parent=LTnewLM_350055700.1:pep;Name=PF08423;signature_desc=Rad51 LTnewLM_35 Pfam protein_match 1855269 1855901 . + . Parent=LTnewLM_350055700.1:pep;Name=PF00154;signature_desc=recA bacterial DNA recombination protein;Ontology_term=GO:0003697,GO:0005524,GO:0006281,GO:0009432 LTnewLM_35 Pfam protein_match 1855293 1855799 . + . Parent=LTnewLM_350055700.1:pep;Name=PF06745;signature_desc=KaiC ### LTnewLM_35 AUGUSTUS gene 1857019 1857480 1 + . ID=LTnewLM_350055800 LTnewLM_35 AUGUSTUS mRNA 1857019 1857480 1 + . ID=LTnewLM_350055800.1;Parent=LTnewLM_350055800 LTnewLM_35 AUGUSTUS CDS 1857019 1857480 1 + 0 ID=LTnewLM_350055800.1:CDS:1;Parent=LTnewLM_350055800.1 ### LTnewLM_35 . polypeptide 1857019 1857480 . + . ID=LTnewLM_350055800.1:pep;Derives_from=LTnewLM_350055800.1;orthologous_to=LmjF.35.4900_mRNA;ortholog_cluster=OG0006082;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1858585 1861311 1 + . ID=LTnewLM_350055900 LTnewLM_35 AUGUSTUS mRNA 1858585 1861311 1 + . ID=LTnewLM_350055900.1;Parent=LTnewLM_350055900 LTnewLM_35 AUGUSTUS CDS 1858585 1861311 1 + 0 ID=LTnewLM_350055900.1:CDS:1;Parent=LTnewLM_350055900.1 ### LTnewLM_35 . polypeptide 1858585 1861311 . + . ID=LTnewLM_350055900.1:pep;Derives_from=LTnewLM_350055900.1;orthologous_to=LmjF.35.4910_mRNA;ortholog_cluster=OG0006083;product=term%3DMCM OB domain/MCM P-loop domain/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17207|Pfam:PF00493|Pfam:PF17855;Ontology_term=GO:0006260,GO:0005524,GO:0003677 LTnewLM_35 Pfam protein_match 1858966 1859304 . + . Parent=LTnewLM_350055900.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_35 Pfam protein_match 1859518 1860120 . + . Parent=LTnewLM_350055900.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_35 Pfam protein_match 1860211 1860441 . + . Parent=LTnewLM_350055900.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_35 AUGUSTUS gene 1862245 1862703 1 + . ID=LTnewLM_350056000 LTnewLM_35 AUGUSTUS mRNA 1862245 1862703 1 + . ID=LTnewLM_350056000.1;Parent=LTnewLM_350056000 LTnewLM_35 AUGUSTUS CDS 1862245 1862703 1 + 0 ID=LTnewLM_350056000.1:CDS:1;Parent=LTnewLM_350056000.1 ### LTnewLM_35 . polypeptide 1862245 1862703 . + . ID=LTnewLM_350056000.1:pep;Derives_from=LTnewLM_350056000.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1865271 1867448 1 + . ID=LTnewLM_350056100 LTnewLM_35 AUGUSTUS mRNA 1865271 1867448 1 + . ID=LTnewLM_350056100.1;Parent=LTnewLM_350056100 LTnewLM_35 AUGUSTUS CDS 1865271 1867448 1 + 0 ID=LTnewLM_350056100.1:CDS:1;Parent=LTnewLM_350056100.1 ### LTnewLM_35 . polypeptide 1865271 1867448 . + . ID=LTnewLM_350056100.1:pep;Derives_from=LTnewLM_350056100.1;orthologous_to=LmjF.35.4930_mRNA;ortholog_cluster=OG0006084;product=term%3DTubulin-tyrosine ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03133;Ontology_term=GO:0006464 LTnewLM_35 Pfam protein_match 1866150 1867067 . + . Parent=LTnewLM_350056100.1:pep;Name=PF03133;signature_desc=Tubulin-tyrosine ligase family;Ontology_term=GO:0006464 ### LTnewLM_35 AUGUSTUS gene 1868823 1869440 1 + . ID=LTnewLM_350056200 LTnewLM_35 AUGUSTUS mRNA 1868823 1869440 1 + . ID=LTnewLM_350056200.1;Parent=LTnewLM_350056200 LTnewLM_35 AUGUSTUS CDS 1868823 1869440 1 + 0 ID=LTnewLM_350056200.1:CDS:1;Parent=LTnewLM_350056200.1 ### LTnewLM_35 . polypeptide 1868823 1869440 . + . ID=LTnewLM_350056200.1:pep;Derives_from=LTnewLM_350056200.1;orthologous_to=LmjF.35.4940_mRNA;ortholog_cluster=OG0006085;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1875143 1878241 1 + . ID=LTnewLM_350056300 LTnewLM_35 AUGUSTUS mRNA 1875143 1878241 1 + . ID=LTnewLM_350056300.1;Parent=LTnewLM_350056300 LTnewLM_35 AUGUSTUS CDS 1875143 1878241 1 + 0 ID=LTnewLM_350056300.1:CDS:1;Parent=LTnewLM_350056300.1 ### LTnewLM_35 . polypeptide 1875143 1878241 . + . ID=LTnewLM_350056300.1:pep;Derives_from=LTnewLM_350056300.1;orthologous_to=LmjF.35.4950_mRNA;ortholog_cluster=OG0006086;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1881927 1882865 1 + . ID=LTnewLM_350056400 LTnewLM_35 AUGUSTUS mRNA 1881927 1882865 1 + . ID=LTnewLM_350056400.1;Parent=LTnewLM_350056400 LTnewLM_35 AUGUSTUS CDS 1881927 1882865 1 + 0 ID=LTnewLM_350056400.1:CDS:1;Parent=LTnewLM_350056400.1 ### LTnewLM_35 . polypeptide 1881927 1882865 . + . ID=LTnewLM_350056400.1:pep;Derives_from=LTnewLM_350056400.1;orthologous_to=LmjF.35.4960_mRNA;ortholog_cluster=OG0006087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1883889 1884917 1 + . ID=LTnewLM_350056500 LTnewLM_35 AUGUSTUS mRNA 1883889 1884917 1 + . ID=LTnewLM_350056500.1;Parent=LTnewLM_350056500 LTnewLM_35 AUGUSTUS CDS 1883889 1884917 1 + 0 ID=LTnewLM_350056500.1:CDS:1;Parent=LTnewLM_350056500.1 ### LTnewLM_35 . polypeptide 1883889 1884917 . + . ID=LTnewLM_350056500.1:pep;Derives_from=LTnewLM_350056500.1;orthologous_to=LmjF.35.4970_mRNA;ortholog_cluster=OG0006088;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1885826 1886143 1 + . ID=LTnewLM_350056600 LTnewLM_35 AUGUSTUS mRNA 1885826 1886143 1 + . ID=LTnewLM_350056600.1;Parent=LTnewLM_350056600 LTnewLM_35 AUGUSTUS CDS 1885826 1886143 1 + 0 ID=LTnewLM_350056600.1:CDS:1;Parent=LTnewLM_350056600.1 ### LTnewLM_35 . polypeptide 1885826 1886143 . + . ID=LTnewLM_350056600.1:pep;Derives_from=LTnewLM_350056600.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 1888348 1889505 1 + . ID=LTnewLM_350056700 LTnewLM_35 AUGUSTUS mRNA 1888348 1889505 1 + . ID=LTnewLM_350056700.1;Parent=LTnewLM_350056700 LTnewLM_35 AUGUSTUS CDS 1888348 1889505 1 + 0 ID=LTnewLM_350056700.1:CDS:1;Parent=LTnewLM_350056700.1 ### LTnewLM_35 . polypeptide 1888348 1889505 . + . ID=LTnewLM_350056700.1:pep;Derives_from=LTnewLM_350056700.1;orthologous_to=LmjF.35.4990_mRNA;ortholog_cluster=OG0006089;product=term%3DPAP2 superfamily C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14360 LTnewLM_35 Pfam protein_match 1888978 1889199 . + . Parent=LTnewLM_350056700.1:pep;Name=PF14360;signature_desc=PAP2 superfamily C-terminal ### LTnewLM_35 AUGUSTUS gene 1891669 1891926 0.98 + . ID=LTnewLM_350056800 LTnewLM_35 AUGUSTUS mRNA 1891669 1891926 0.98 + . ID=LTnewLM_350056800.1;Parent=LTnewLM_350056800 LTnewLM_35 AUGUSTUS CDS 1891669 1891926 0.98 + 0 ID=LTnewLM_350056800.1:CDS:1;Parent=LTnewLM_350056800.1 ### LTnewLM_35 . polypeptide 1891669 1891926 . + . ID=LTnewLM_350056800.1:pep;Derives_from=LTnewLM_350056800.1;product=term%3Dhypothetical protein ### LTnewLM_35 AUGUSTUS gene 1893200 1894042 1 + . ID=LTnewLM_350056900 LTnewLM_35 AUGUSTUS mRNA 1893200 1894042 1 + . ID=LTnewLM_350056900.1;Parent=LTnewLM_350056900 LTnewLM_35 AUGUSTUS CDS 1893200 1894042 1 + 0 ID=LTnewLM_350056900.1:CDS:1;Parent=LTnewLM_350056900.1 ### LTnewLM_35 . polypeptide 1893200 1894042 . + . ID=LTnewLM_350056900.1:pep;Derives_from=LTnewLM_350056900.1;orthologous_to=LmjF.35.5000_mRNA;ortholog_cluster=OG0006090;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_35 Pfam protein_match 1893653 1893901 . + . Parent=LTnewLM_350056900.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_35 AUGUSTUS gene 1906670 1907848 1 + . ID=LTnewLM_350057000 LTnewLM_35 AUGUSTUS mRNA 1906670 1907848 1 + . ID=LTnewLM_350057000.1;Parent=LTnewLM_350057000 LTnewLM_35 AUGUSTUS CDS 1906670 1907848 1 + 0 ID=LTnewLM_350057000.1:CDS:1;Parent=LTnewLM_350057000.1 ### LTnewLM_35 . polypeptide 1906670 1907848 . + . ID=LTnewLM_350057000.1:pep;Derives_from=LTnewLM_350057000.1;orthologous_to=LmjF.35.5010_mRNA;ortholog_cluster=OG0006091;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_35 Pfam protein_match 1906679 1907527 . + . Parent=LTnewLM_350057000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1906700 1907263 . + . Parent=LTnewLM_350057000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_35 AUGUSTUS gene 1911066 1914113 2 + . ID=LTnewLM_350057100 LTnewLM_35 AUGUSTUS mRNA 1911066 1914113 1 + . ID=LTnewLM_350057100.1;Parent=LTnewLM_350057100 LTnewLM_35 AUGUSTUS CDS 1911066 1914113 1 + 0 ID=LTnewLM_350057100.1:CDS:1;Parent=LTnewLM_350057100.1 LTnewLM_35 AUGUSTUS mRNA 1912989 1914113 1 + . ID=LTnewLM_350057100.2;Parent=LTnewLM_350057100 LTnewLM_35 AUGUSTUS CDS 1912989 1914113 1 + 0 ID=LTnewLM_350057100.2:CDS:1;Parent=LTnewLM_350057100.2 ### LTnewLM_35 . polypeptide 1911066 1914113 . + . ID=LTnewLM_350057100.1:pep;Derives_from=LTnewLM_350057100.1;orthologous_to=LTnewLM_350057100.2,LmjF.35.5020_mRNA;ortholog_cluster=OG0000476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . polypeptide 1912989 1914113 . + . ID=LTnewLM_350057100.2:pep;Derives_from=LTnewLM_350057100.2;orthologous_to=LTnewLM_350057100.1,LmjF.35.5020_mRNA;ortholog_cluster=OG0000476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1914795 1916546 . + . ID=LTnewLM_350057200;coverage=0.998;sequence_ID=0.909;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.5030_0 LTnewLM_35 Liftoff mRNA 1914795 1916546 . + . ID=LTnewLM_350057200.1;Parent=LTnewLM_350057200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1914795 1916546 . + 0 ID=LTnewLM_350057200.1:CDS:1;Parent=LTnewLM_350057200.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1914795 1916546 . + . ID=LTnewLM_350057200.1:pep;Derives_from=LTnewLM_350057200.1;orthologous_to=LmjF.35.5030_mRNA;ortholog_cluster=OG0006092;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1917955 1919637 1 + . ID=LTnewLM_350057300 LTnewLM_35 AUGUSTUS mRNA 1917955 1919637 1 + . ID=LTnewLM_350057300.1;Parent=LTnewLM_350057300 LTnewLM_35 AUGUSTUS CDS 1917955 1919637 1 + 0 ID=LTnewLM_350057300.1:CDS:1;Parent=LTnewLM_350057300.1 ### LTnewLM_35 . polypeptide 1917955 1919637 . + . ID=LTnewLM_350057300.1:pep;Derives_from=LTnewLM_350057300.1;orthologous_to=LmjF.35.5040_mRNA;ortholog_cluster=OG0006093;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)/Poly-adenylate binding protein%2C unique domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076|Pfam:PF13893|Pfam:PF00658;Ontology_term=GO:0003676,GO:0003723 LTnewLM_35 Pfam protein_match 1918033 1918239 . + . Parent=LTnewLM_350057300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1918297 1918479 . + . Parent=LTnewLM_350057300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1918579 1918767 . + . Parent=LTnewLM_350057300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1918870 1919100 . + . Parent=LTnewLM_350057300.1:pep;Name=PF13893;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) LTnewLM_35 Pfam protein_match 1918879 1919082 . + . Parent=LTnewLM_350057300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_35 Pfam protein_match 1919419 1919613 . + . Parent=LTnewLM_350057300.1:pep;Name=PF00658;signature_desc=Poly-adenylate binding protein%2C unique domain;Ontology_term=GO:0003723 ### LTnewLM_35 AUGUSTUS gene 1922586 1924574 1 + . ID=LTnewLM_350057400 LTnewLM_35 AUGUSTUS mRNA 1922586 1924574 1 + . ID=LTnewLM_350057400.1;Parent=LTnewLM_350057400 LTnewLM_35 AUGUSTUS CDS 1922586 1924574 1 + 0 ID=LTnewLM_350057400.1:CDS:1;Parent=LTnewLM_350057400.1 ### LTnewLM_35 . polypeptide 1922586 1924574 . + . ID=LTnewLM_350057400.1:pep;Derives_from=LTnewLM_350057400.1;orthologous_to=LmjF.35.5050_mRNA;ortholog_cluster=OG0006094;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1926691 1928247 . + . ID=LTnewLM_350057500:pseudogene;coverage=0.992;sequence_ID=0.931;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.5060_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1926691 1928247 . + . ID=LTnewLM_350057500.1;Parent=LTnewLM_350057500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1926691 1928247 . + . ID=LTnewLM_350057500.1:pseudogenic_exon:1;Parent=LTnewLM_350057500.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1926691 1928247 . + . ID=LTnewLM_350057500.1:pep;Derives_from=LTnewLM_350057500.1;orthologous_to=LmjF.35.5060_mRNA;ortholog_cluster=OG0007678;product=term%3DBacteroidetes VLRF1 release factor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18826 LTnewLM_35 Pfam protein_match 1927744 1928193 . + . Parent=LTnewLM_350057500.1:pep;Name=PF18826;signature_desc=Bacteroidetes VLRF1 release factor ### LTnewLM_35 AUGUSTUS gene 1930166 1930672 1 + . ID=LTnewLM_350057600 LTnewLM_35 AUGUSTUS mRNA 1930166 1930672 1 + . ID=LTnewLM_350057600.1;Parent=LTnewLM_350057600 LTnewLM_35 AUGUSTUS CDS 1930166 1930672 1 + 0 ID=LTnewLM_350057600.1:CDS:1;Parent=LTnewLM_350057600.1 ### LTnewLM_35 . polypeptide 1930166 1930672 . + . ID=LTnewLM_350057600.1:pep;Derives_from=LTnewLM_350057600.1;orthologous_to=LmjF.35.5070_mRNA;ortholog_cluster=OG0006095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1934265 1934780 1 + . ID=LTnewLM_350057700 LTnewLM_35 AUGUSTUS mRNA 1934265 1934780 1 + . ID=LTnewLM_350057700.1;Parent=LTnewLM_350057700 LTnewLM_35 AUGUSTUS CDS 1934265 1934780 1 + 0 ID=LTnewLM_350057700.1:CDS:1;Parent=LTnewLM_350057700.1 ### LTnewLM_35 . polypeptide 1934265 1934780 . + . ID=LTnewLM_350057700.1:pep;Derives_from=LTnewLM_350057700.1;orthologous_to=LmjF.35.5080_mRNA;ortholog_cluster=OG0006096;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1936830 1938584 1 + . ID=LTnewLM_350057800 LTnewLM_35 AUGUSTUS mRNA 1936830 1938584 1 + . ID=LTnewLM_350057800.1;Parent=LTnewLM_350057800 LTnewLM_35 AUGUSTUS CDS 1936830 1938584 1 + 0 ID=LTnewLM_350057800.1:CDS:1;Parent=LTnewLM_350057800.1 ### LTnewLM_35 . polypeptide 1936830 1938584 . + . ID=LTnewLM_350057800.1:pep;Derives_from=LTnewLM_350057800.1;orthologous_to=LmjF.35.5090_mRNA;ortholog_cluster=OG0006097;product=term%3DProtein-only RNase P%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16953 LTnewLM_35 Pfam protein_match 1938042 1938467 . + . Parent=LTnewLM_350057800.1:pep;Name=PF16953;signature_desc=Protein-only RNase P ### LTnewLM_35 AUGUSTUS gene 1939309 1939560 1 + . ID=LTnewLM_350057900 LTnewLM_35 AUGUSTUS mRNA 1939309 1939560 1 + . ID=LTnewLM_350057900.1;Parent=LTnewLM_350057900 LTnewLM_35 AUGUSTUS CDS 1939309 1939560 1 + 0 ID=LTnewLM_350057900.1:CDS:1;Parent=LTnewLM_350057900.1 ### LTnewLM_35 . polypeptide 1939309 1939560 . + . ID=LTnewLM_350057900.1:pep;Derives_from=LTnewLM_350057900.1;orthologous_to=LTnewLM_330028300.1,LmjF.33.1955_mRNA,LmjF.35.5100_mRNA;ortholog_cluster=OG0000238;product=term%3DRibosomal protein L37e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01907;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_35 Pfam protein_match 1939312 1939464 . + . Parent=LTnewLM_350057900.1:pep;Name=PF01907;signature_desc=Ribosomal protein L37e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_35 AUGUSTUS gene 1940486 1942711 1 + . ID=LTnewLM_350058000 LTnewLM_35 AUGUSTUS mRNA 1940486 1942711 1 + . ID=LTnewLM_350058000.1;Parent=LTnewLM_350058000 LTnewLM_35 AUGUSTUS CDS 1940486 1942711 1 + 0 ID=LTnewLM_350058000.1:CDS:1;Parent=LTnewLM_350058000.1 ### LTnewLM_35 . polypeptide 1940486 1942711 . + . ID=LTnewLM_350058000.1:pep;Derives_from=LTnewLM_350058000.1;orthologous_to=LmjF.35.5110_mRNA;ortholog_cluster=OG0006098;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_35 Pfam protein_match 1942043 1942510 . + . Parent=LTnewLM_350058000.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_35 AUGUSTUS gene 1943298 1945460 1 + . ID=LTnewLM_350058100 LTnewLM_35 AUGUSTUS mRNA 1943298 1945460 1 + . ID=LTnewLM_350058100.1;Parent=LTnewLM_350058100 LTnewLM_35 AUGUSTUS CDS 1943298 1945460 1 + 0 ID=LTnewLM_350058100.1:CDS:1;Parent=LTnewLM_350058100.1 ### LTnewLM_35 . polypeptide 1943298 1945460 . + . ID=LTnewLM_350058100.1:pep;Derives_from=LTnewLM_350058100.1;orthologous_to=LmjF.35.5120_mRNA;ortholog_cluster=OG0006099;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1946384 1947496 1 + . ID=LTnewLM_350058200 LTnewLM_35 AUGUSTUS mRNA 1946384 1947496 1 + . ID=LTnewLM_350058200.1;Parent=LTnewLM_350058200 LTnewLM_35 AUGUSTUS CDS 1946384 1947496 1 + 0 ID=LTnewLM_350058200.1:CDS:1;Parent=LTnewLM_350058200.1 ### LTnewLM_35 . polypeptide 1946384 1947496 . + . ID=LTnewLM_350058200.1:pep;Derives_from=LTnewLM_350058200.1;orthologous_to=LmjF.35.5130_mRNA;ortholog_cluster=OG0006100;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1948554 1949414 1 + . ID=LTnewLM_350058300 LTnewLM_35 AUGUSTUS mRNA 1948554 1949414 1 + . ID=LTnewLM_350058300.1;Parent=LTnewLM_350058300 LTnewLM_35 AUGUSTUS CDS 1948554 1949414 1 + 0 ID=LTnewLM_350058300.1:CDS:1;Parent=LTnewLM_350058300.1 ### LTnewLM_35 . polypeptide 1948554 1949414 . + . ID=LTnewLM_350058300.1:pep;Derives_from=LTnewLM_350058300.1;orthologous_to=LmjF.35.5140_mRNA;ortholog_cluster=OG0006101;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 Liftoff gene 1949759 1951660 . + . ID=LTnewLM_350058400;coverage=1.0;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.35.5150_0 LTnewLM_35 Liftoff mRNA 1949759 1951660 . + . ID=LTnewLM_350058400.1;Parent=LTnewLM_350058400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 Liftoff CDS 1949759 1951660 . + 0 ID=LTnewLM_350058400.1:CDS:1;Parent=LTnewLM_350058400.1;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1949759 1951660 . + . ID=LTnewLM_350058400.1:pep;Derives_from=LTnewLM_350058400.1;orthologous_to=LmjF.35.5150_mRNA;ortholog_cluster=OG0006102;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_35 Pfam protein_match 1949951 1951588 . + . Parent=LTnewLM_350058400.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_35 AUGUSTUS gene 1954552 1955472 1 + . ID=LTnewLM_350058500 LTnewLM_35 AUGUSTUS mRNA 1954552 1955472 1 + . ID=LTnewLM_350058500.1;Parent=LTnewLM_350058500 LTnewLM_35 AUGUSTUS CDS 1954552 1955472 1 + 0 ID=LTnewLM_350058500.1:CDS:1;Parent=LTnewLM_350058500.1 ### LTnewLM_35 . polypeptide 1954552 1955472 . + . ID=LTnewLM_350058500.1:pep;Derives_from=LTnewLM_350058500.1;orthologous_to=LmjF.35.5160_mRNA;ortholog_cluster=OG0006103;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1957184 1958434 1 + . ID=LTnewLM_350058600 LTnewLM_35 AUGUSTUS mRNA 1957184 1958434 1 + . ID=LTnewLM_350058600.1;Parent=LTnewLM_350058600 LTnewLM_35 AUGUSTUS CDS 1957184 1958434 1 + 0 ID=LTnewLM_350058600.1:CDS:1;Parent=LTnewLM_350058600.1 ### LTnewLM_35 . polypeptide 1957184 1958434 . + . ID=LTnewLM_350058600.1:pep;Derives_from=LTnewLM_350058600.1;orthologous_to=LmjF.35.5170_mRNA;ortholog_cluster=OG0006104;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1959311 1961224 1 + . ID=LTnewLM_350058700 LTnewLM_35 AUGUSTUS mRNA 1959311 1961224 1 + . ID=LTnewLM_350058700.1;Parent=LTnewLM_350058700 LTnewLM_35 AUGUSTUS CDS 1959311 1961224 1 + 0 ID=LTnewLM_350058700.1:CDS:1;Parent=LTnewLM_350058700.1 ### LTnewLM_35 . polypeptide 1959311 1961224 . + . ID=LTnewLM_350058700.1:pep;Derives_from=LTnewLM_350058700.1;orthologous_to=LmjF.35.5180_mRNA;ortholog_cluster=OG0006105;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1962125 1962659 1 + . ID=LTnewLM_350058800 LTnewLM_35 AUGUSTUS mRNA 1962125 1962659 1 + . ID=LTnewLM_350058800.1;Parent=LTnewLM_350058800 LTnewLM_35 AUGUSTUS CDS 1962125 1962254 1 + 0 ID=LTnewLM_350058800.1:CDS:1;Parent=LTnewLM_350058800.1 LTnewLM_35 AUGUSTUS CDS 1962454 1962659 1 + 2 ID=LTnewLM_350058800.1:CDS:2;Parent=LTnewLM_350058800.1 ### LTnewLM_35 . polypeptide 1962125 1962659 . + . ID=LTnewLM_350058800.1:pep;Derives_from=LTnewLM_350058800.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1963708 1965141 1 + . ID=LTnewLM_350058900 LTnewLM_35 AUGUSTUS mRNA 1963708 1965141 1 + . ID=LTnewLM_350058900.1;Parent=LTnewLM_350058900 LTnewLM_35 AUGUSTUS CDS 1963708 1965141 1 + 0 ID=LTnewLM_350058900.1:CDS:1;Parent=LTnewLM_350058900.1 ### LTnewLM_35 . polypeptide 1963708 1965141 . + . ID=LTnewLM_350058900.1:pep;Derives_from=LTnewLM_350058900.1;orthologous_to=LmjF.35.5190_mRNA;ortholog_cluster=OG0006106;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531|Pfam:PF00169;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1963966 1964667 . + . Parent=LTnewLM_350058900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_35 Pfam protein_match 1963975 1964679 . + . Parent=LTnewLM_350058900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_35 Pfam protein_match 1964155 1964643 . + . Parent=LTnewLM_350058900.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_35 Pfam protein_match 1964836 1965129 . + . Parent=LTnewLM_350058900.1:pep;Name=PF00169;signature_desc=PH domain ### LTnewLM_35 AUGUSTUS gene 1969104 1969877 1 + . ID=LTnewLM_350059000 LTnewLM_35 AUGUSTUS mRNA 1969104 1969877 1 + . ID=LTnewLM_350059000.1;Parent=LTnewLM_350059000 LTnewLM_35 AUGUSTUS CDS 1969104 1969877 1 + 0 ID=LTnewLM_350059000.1:CDS:1;Parent=LTnewLM_350059000.1 ### LTnewLM_35 . polypeptide 1969104 1969877 . + . ID=LTnewLM_350059000.1:pep;Derives_from=LTnewLM_350059000.1;orthologous_to=LmjF.35.5200_mRNA;ortholog_cluster=OG0006107;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642;Ontology_term=GO:0046872 LTnewLM_35 Pfam protein_match 1969173 1969238 . + . Parent=LTnewLM_350059000.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_35 AUGUSTUS gene 1975619 1977013 1 + . ID=LTnewLM_350059100 LTnewLM_35 AUGUSTUS mRNA 1975619 1977013 1 + . ID=LTnewLM_350059100.1;Parent=LTnewLM_350059100 LTnewLM_35 AUGUSTUS CDS 1975619 1977013 1 + 0 ID=LTnewLM_350059100.1:CDS:1;Parent=LTnewLM_350059100.1 ### LTnewLM_35 . polypeptide 1975619 1977013 . + . ID=LTnewLM_350059100.1:pep;Derives_from=LTnewLM_350059100.1;orthologous_to=LmjF.35.5210_mRNA;ortholog_cluster=OG0006108;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_35 Pfam protein_match 1976117 1976320 . + . Parent=LTnewLM_350059100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_35 AUGUSTUS gene 1977638 1978594 1 + . ID=LTnewLM_350059200 LTnewLM_35 AUGUSTUS mRNA 1977638 1978594 1 + . ID=LTnewLM_350059200.1;Parent=LTnewLM_350059200 LTnewLM_35 AUGUSTUS CDS 1977638 1978594 1 + 0 ID=LTnewLM_350059200.1:CDS:1;Parent=LTnewLM_350059200.1 ### LTnewLM_35 . polypeptide 1977638 1978594 . + . ID=LTnewLM_350059200.1:pep;Derives_from=LTnewLM_350059200.1;orthologous_to=LmjF.35.5220_mRNA;ortholog_cluster=OG0006109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1979246 1979971 1 + . ID=LTnewLM_350059300 LTnewLM_35 AUGUSTUS mRNA 1979246 1979971 1 + . ID=LTnewLM_350059300.1;Parent=LTnewLM_350059300 LTnewLM_35 AUGUSTUS CDS 1979246 1979971 1 + 0 ID=LTnewLM_350059300.1:CDS:1;Parent=LTnewLM_350059300.1 ### LTnewLM_35 . polypeptide 1979246 1979971 . + . ID=LTnewLM_350059300.1:pep;Derives_from=LTnewLM_350059300.1;orthologous_to=LmjF.35.5230_mRNA;ortholog_cluster=OG0006110;product=term%3DPutative methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02390;Ontology_term=GO:0006400,GO:0008176 LTnewLM_35 Pfam protein_match 1979405 1979923 . + . Parent=LTnewLM_350059300.1:pep;Name=PF02390;signature_desc=Putative methyltransferase;Ontology_term=GO:0008176,GO:0006400 ### LTnewLM_35 AUGUSTUS gene 1982229 1983035 1 + . ID=LTnewLM_350059400 LTnewLM_35 AUGUSTUS mRNA 1982229 1983035 1 + . ID=LTnewLM_350059400.1;Parent=LTnewLM_350059400 LTnewLM_35 AUGUSTUS CDS 1982229 1983035 1 + 0 ID=LTnewLM_350059400.1:CDS:1;Parent=LTnewLM_350059400.1 ### LTnewLM_35 . polypeptide 1982229 1983035 . + . ID=LTnewLM_350059400.1:pep;Derives_from=LTnewLM_350059400.1;orthologous_to=LmjF.35.5240_mRNA;ortholog_cluster=OG0006111;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 . pseudogene 1983901 1987004 . + . ID=LTnewLM_350059500:pseudogene;coverage=0.992;sequence_ID=0.921;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.35.5250_0;has_internal_stop=true LTnewLM_35 . pseudogenic_transcript 1983901 1987004 . + . ID=LTnewLM_350059500.1;Parent=LTnewLM_350059500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1985160 1987004 . + . ID=LTnewLM_350059500.1:pseudogenic_exon:1;Parent=LTnewLM_350059500.1;extra_copy_number=0 LTnewLM_35 . pseudogenic_transcript 1985566 1987004 . + . ID=LTnewLM_350059500.2;Parent=LTnewLM_350059500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_35 . pseudogenic_exon 1985577 1987004 . + . ID=LTnewLM_350059500.2:pseudogenic_exon:1;Parent=LTnewLM_350059500.2;extra_copy_number=0 ### LTnewLM_35 . polypeptide 1985160 1987004 . + . ID=LTnewLM_350059500.1:pep;Derives_from=LTnewLM_350059500.1;orthologous_to=LTnewLM_350059500.2,LmjF.35.5250.1_mRNA,LmjF.35.5250.2_mRNA;ortholog_cluster=OG0000295;product=term%3DALG11 mannosyltransferase N-terminus/Glycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15924|Pfam:PF00534|Pfam:PF13692;Ontology_term=GO:0009058 LTnewLM_35 Pfam protein_match 1985679 1986344 . + . Parent=LTnewLM_350059500.1:pep;Name=PF15924;signature_desc=ALG11 mannosyltransferase N-terminus LTnewLM_35 Pfam protein_match 1986423 1986920 . + . Parent=LTnewLM_350059500.1:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_35 Pfam protein_match 1986432 1986866 . + . Parent=LTnewLM_350059500.1:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_35 . polypeptide 1985577 1987004 . + . ID=LTnewLM_350059500.2:pep;Derives_from=LTnewLM_350059500.2;orthologous_to=LTnewLM_350059500.1,LmjF.35.5250.1_mRNA,LmjF.35.5250.2_mRNA;ortholog_cluster=OG0000295;product=term%3DALG11 mannosyltransferase N-terminus/Glycosyl transferases group 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15924|Pfam:PF00534|Pfam:PF13692;Ontology_term=GO:0009058 LTnewLM_35 Pfam protein_match 1985679 1986344 . + . Parent=LTnewLM_350059500.2:pep;Name=PF15924;signature_desc=ALG11 mannosyltransferase N-terminus LTnewLM_35 Pfam protein_match 1986423 1986920 . + . Parent=LTnewLM_350059500.2:pep;Name=PF00534;signature_desc=Glycosyl transferases group 1;Ontology_term=GO:0009058 LTnewLM_35 Pfam protein_match 1986432 1986866 . + . Parent=LTnewLM_350059500.2:pep;Name=PF13692;signature_desc=Glycosyl transferases group 1 ### LTnewLM_35 AUGUSTUS gene 1987598 1987855 1 + . ID=LTnewLM_350059600 LTnewLM_35 AUGUSTUS mRNA 1987598 1987855 1 + . ID=LTnewLM_350059600.1;Parent=LTnewLM_350059600 LTnewLM_35 AUGUSTUS CDS 1987598 1987855 1 + 0 ID=LTnewLM_350059600.1:CDS:1;Parent=LTnewLM_350059600.1 ### LTnewLM_35 . polypeptide 1987598 1987855 . + . ID=LTnewLM_350059600.1:pep;Derives_from=LTnewLM_350059600.1;orthologous_to=LmjF.35.5260_mRNA;ortholog_cluster=OG0006112;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1988865 1989935 1 + . ID=LTnewLM_350059700 LTnewLM_35 AUGUSTUS mRNA 1988865 1989935 1 + . ID=LTnewLM_350059700.1;Parent=LTnewLM_350059700 LTnewLM_35 AUGUSTUS CDS 1988865 1989935 1 + 0 ID=LTnewLM_350059700.1:CDS:1;Parent=LTnewLM_350059700.1 ### LTnewLM_35 . polypeptide 1988865 1989935 . + . ID=LTnewLM_350059700.1:pep;Derives_from=LTnewLM_350059700.1;orthologous_to=LmjF.35.5270_mRNA;ortholog_cluster=OG0006113;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 1989423 1989521 . + . Parent=LTnewLM_350059700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 1990909 1991676 1 + . ID=LTnewLM_350059800 LTnewLM_35 AUGUSTUS mRNA 1990909 1991676 1 + . ID=LTnewLM_350059800.1;Parent=LTnewLM_350059800 LTnewLM_35 AUGUSTUS CDS 1990909 1991676 1 + 0 ID=LTnewLM_350059800.1:CDS:1;Parent=LTnewLM_350059800.1 ### LTnewLM_35 . polypeptide 1990909 1991676 . + . ID=LTnewLM_350059800.1:pep;Derives_from=LTnewLM_350059800.1;orthologous_to=LmjF.35.5280_mRNA;ortholog_cluster=OG0006114;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1992469 1993044 1 + . ID=LTnewLM_350059900 LTnewLM_35 AUGUSTUS mRNA 1992469 1993044 1 + . ID=LTnewLM_350059900.1;Parent=LTnewLM_350059900 LTnewLM_35 AUGUSTUS CDS 1992469 1993044 1 + 0 ID=LTnewLM_350059900.1:CDS:1;Parent=LTnewLM_350059900.1 ### LTnewLM_35 . polypeptide 1992469 1993044 . + . ID=LTnewLM_350059900.1:pep;Derives_from=LTnewLM_350059900.1;orthologous_to=LmjF.35.5290_mRNA;ortholog_cluster=OG0006115;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1993810 1995045 0.99 + . ID=LTnewLM_350060000 LTnewLM_35 AUGUSTUS mRNA 1993810 1995045 0.99 + . ID=LTnewLM_350060000.1;Parent=LTnewLM_350060000 LTnewLM_35 AUGUSTUS CDS 1993810 1995045 0.99 + 0 ID=LTnewLM_350060000.1:CDS:1;Parent=LTnewLM_350060000.1 ### LTnewLM_35 . polypeptide 1993810 1995045 . + . ID=LTnewLM_350060000.1:pep;Derives_from=LTnewLM_350060000.1;orthologous_to=LmjF.35.5300_mRNA;ortholog_cluster=OG0006116;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 1995790 1996914 1 + . ID=LTnewLM_350060100 LTnewLM_35 AUGUSTUS mRNA 1995790 1996914 1 + . ID=LTnewLM_350060100.1;Parent=LTnewLM_350060100 LTnewLM_35 AUGUSTUS CDS 1995790 1996914 1 + 0 ID=LTnewLM_350060100.1:CDS:1;Parent=LTnewLM_350060100.1 ### LTnewLM_35 . polypeptide 1995790 1996914 . + . ID=LTnewLM_350060100.1:pep;Derives_from=LTnewLM_350060100.1;orthologous_to=LmjF.35.5310_mRNA;ortholog_cluster=OG0006117;product=term%3DFerrous iron transport protein B/50S ribosome-binding GTPase/C-terminal region of MMR_HSR1 domain/TGS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02421|Pfam:PF01926|Pfam:PF16897|Pfam:PF02824;Ontology_term=GO:0005525,GO:0016021,GO:0015684,GO:0015093 LTnewLM_35 Pfam protein_match 1995985 1996251 . + . Parent=LTnewLM_350060100.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_35 Pfam protein_match 1995985 1996281 . + . Parent=LTnewLM_350060100.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_35 Pfam protein_match 1996363 1996668 . + . Parent=LTnewLM_350060100.1:pep;Name=PF16897;signature_desc=C-terminal region of MMR_HSR1 domain LTnewLM_35 Pfam protein_match 1996675 1996890 . + . Parent=LTnewLM_350060100.1:pep;Name=PF02824;signature_desc=TGS domain ### LTnewLM_35 AUGUSTUS gene 1997538 1999331 1 + . ID=LTnewLM_350060200 LTnewLM_35 AUGUSTUS mRNA 1997538 1999331 1 + . ID=LTnewLM_350060200.1;Parent=LTnewLM_350060200 LTnewLM_35 AUGUSTUS CDS 1997538 1999331 1 + 0 ID=LTnewLM_350060200.1:CDS:1;Parent=LTnewLM_350060200.1 ### LTnewLM_35 . polypeptide 1997538 1999331 . + . ID=LTnewLM_350060200.1:pep;Derives_from=LTnewLM_350060200.1;orthologous_to=LmjF.35.5320_mRNA;ortholog_cluster=OG0006118;product=term%3DSAC3/GANP family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03399 LTnewLM_35 Pfam protein_match 1998405 1999058 . + . Parent=LTnewLM_350060200.1:pep;Name=PF03399;signature_desc=SAC3/GANP family ### LTnewLM_35 AUGUSTUS gene 1999914 2000987 1 + . ID=LTnewLM_350060300 LTnewLM_35 AUGUSTUS mRNA 1999914 2000987 1 + . ID=LTnewLM_350060300.1;Parent=LTnewLM_350060300 LTnewLM_35 AUGUSTUS CDS 1999914 2000987 1 + 0 ID=LTnewLM_350060300.1:CDS:1;Parent=LTnewLM_350060300.1 ### LTnewLM_35 . polypeptide 1999914 2000987 . + . ID=LTnewLM_350060300.1:pep;Derives_from=LTnewLM_350060300.1;orthologous_to=LmjF.35.5330_mRNA;ortholog_cluster=OG0006119;product=term%3DFMN-dependent dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01070;Ontology_term=GO:0016491 LTnewLM_35 Pfam protein_match 1999965 2000237 . + . Parent=LTnewLM_350060300.1:pep;Name=PF01070;signature_desc=FMN-dependent dehydrogenase;Ontology_term=GO:0016491 LTnewLM_35 Pfam protein_match 2000469 2000957 . + . Parent=LTnewLM_350060300.1:pep;Name=PF01070;signature_desc=FMN-dependent dehydrogenase;Ontology_term=GO:0016491 ### LTnewLM_35 AUGUSTUS gene 2001901 2002941 1 + . ID=LTnewLM_350060400 LTnewLM_35 AUGUSTUS mRNA 2001901 2002941 1 + . ID=LTnewLM_350060400.1;Parent=LTnewLM_350060400 LTnewLM_35 AUGUSTUS CDS 2001901 2002941 1 + 0 ID=LTnewLM_350060400.1:CDS:1;Parent=LTnewLM_350060400.1 ### LTnewLM_35 . polypeptide 2001901 2002941 . + . ID=LTnewLM_350060400.1:pep;Derives_from=LTnewLM_350060400.1;orthologous_to=LmjF.35.5340_mRNA;ortholog_cluster=OG0006120;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 2002588 2002845 . + . Parent=LTnewLM_350060400.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_35 Pfam protein_match 2002669 2002755 . + . Parent=LTnewLM_350060400.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_35 AUGUSTUS gene 2003663 2004895 1 + . ID=LTnewLM_350060500 LTnewLM_35 AUGUSTUS mRNA 2003663 2004895 1 + . ID=LTnewLM_350060500.1;Parent=LTnewLM_350060500 LTnewLM_35 AUGUSTUS CDS 2003663 2004895 1 + 0 ID=LTnewLM_350060500.1:CDS:1;Parent=LTnewLM_350060500.1 ### LTnewLM_35 . polypeptide 2003663 2004895 . + . ID=LTnewLM_350060500.1:pep;Derives_from=LTnewLM_350060500.1;orthologous_to=LmjF.35.5350_mRNA;ortholog_cluster=OG0006121;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_35 Pfam protein_match 2003696 2004877 . + . Parent=LTnewLM_350060500.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_35 AUGUSTUS gene 2007661 2008878 1 + . ID=LTnewLM_350060600 LTnewLM_35 AUGUSTUS mRNA 2007661 2008878 1 + . ID=LTnewLM_350060600.1;Parent=LTnewLM_350060600 LTnewLM_35 AUGUSTUS CDS 2007661 2008878 1 + 0 ID=LTnewLM_350060600.1:CDS:1;Parent=LTnewLM_350060600.1 ### LTnewLM_35 . polypeptide 2007661 2008878 . + . ID=LTnewLM_350060600.1:pep;Derives_from=LTnewLM_350060600.1;orthologous_to=LmjF.35.5360_mRNA;ortholog_cluster=OG0006122;product=term%3DTryptophan/tyrosine permease family/Transmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03222|Pfam:PF01490;Ontology_term=GO:0003333 LTnewLM_35 Pfam protein_match 2007670 2008293 . + . Parent=LTnewLM_350060600.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 LTnewLM_35 Pfam protein_match 2007670 2008863 . + . Parent=LTnewLM_350060600.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_35 AUGUSTUS gene 2009614 2010777 1 + . ID=LTnewLM_350060700 LTnewLM_35 AUGUSTUS mRNA 2009614 2010777 1 + . ID=LTnewLM_350060700.1;Parent=LTnewLM_350060700 LTnewLM_35 AUGUSTUS CDS 2009614 2010777 1 + 0 ID=LTnewLM_350060700.1:CDS:1;Parent=LTnewLM_350060700.1 ### LTnewLM_35 . polypeptide 2009614 2010777 . + . ID=LTnewLM_350060700.1:pep;Derives_from=LTnewLM_350060700.1;orthologous_to=LmjF.35.5370_mRNA;ortholog_cluster=OG0006123;product=term%3DDiacylglycerol kinase catalytic domain/Diacylglycerol kinase accessory domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00781|Pfam:PF00609;Ontology_term=GO:0004143,GO:0007205 LTnewLM_35 Pfam protein_match 2009665 2009988 . + . Parent=LTnewLM_350060700.1:pep;Name=PF00781;signature_desc=Diacylglycerol kinase catalytic domain;Ontology_term=GO:0004143,GO:0007205 LTnewLM_35 Pfam protein_match 2010142 2010594 . + . Parent=LTnewLM_350060700.1:pep;Name=PF00609;signature_desc=Diacylglycerol kinase accessory domain;Ontology_term=GO:0004143,GO:0007205 ### LTnewLM_35 AUGUSTUS gene 2012606 2013385 1 + . ID=LTnewLM_350060800 LTnewLM_35 AUGUSTUS mRNA 2012606 2013385 1 + . ID=LTnewLM_350060800.1;Parent=LTnewLM_350060800 LTnewLM_35 AUGUSTUS CDS 2012606 2013385 1 + 0 ID=LTnewLM_350060800.1:CDS:1;Parent=LTnewLM_350060800.1 ### LTnewLM_35 . polypeptide 2012606 2013385 . + . ID=LTnewLM_350060800.1:pep;Derives_from=LTnewLM_350060800.1;orthologous_to=LmjF.35.5380_mRNA;ortholog_cluster=OG0006124;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_35 AUGUSTUS gene 2016073 2035950 0.7 + . ID=LTnewLM_350060900 LTnewLM_35 AUGUSTUS mRNA 2016073 2035950 0.7 + . ID=LTnewLM_350060900.1;Parent=LTnewLM_350060900 LTnewLM_35 AUGUSTUS CDS 2016073 2027055 0.7 + 0 ID=LTnewLM_350060900.1:CDS:1;Parent=LTnewLM_350060900.1 LTnewLM_35 AUGUSTUS CDS 2027209 2035950 0.92 + 0 ID=LTnewLM_350060900.1:CDS:2;Parent=LTnewLM_350060900.1 ### LTnewLM_35 . polypeptide 2016073 2035950 . + . ID=LTnewLM_350060900.1:pep;Derives_from=LTnewLM_350060900.1;orthologous_to=LmjF.35.5390_mRNA;ortholog_cluster=OG0006125;product=term%3DSPRY domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00622|Pfam:PF00632;Ontology_term=GO:0004842,GO:0005515 LTnewLM_35 Pfam protein_match 2021536 2021859 . + . Parent=LTnewLM_350060900.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_35 Pfam protein_match 2035003 2035746 . + . Parent=LTnewLM_350060900.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_35 AUGUSTUS gene 2039485 2039736 0.94 - . ID=LTnewLM_350061000 LTnewLM_35 AUGUSTUS mRNA 2039485 2039736 0.94 - . ID=LTnewLM_350061000.1;Parent=LTnewLM_350061000 LTnewLM_35 AUGUSTUS CDS 2039485 2039736 0.94 - 0 ID=LTnewLM_350061000.1:CDS:1;Parent=LTnewLM_350061000.1 ### LTnewLM_35 . polypeptide 2039485 2039736 . - . ID=LTnewLM_350061000.1:pep;Derives_from=LTnewLM_350061000.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1 10847 0.56 + . ID=LTnewLM_360005000;fiveEndPartial=true;Start_range=.,. LTnewLM_36 AUGUSTUS mRNA 1 10847 0.56 + . ID=LTnewLM_360005000.1;Parent=LTnewLM_360005000 LTnewLM_36 AUGUSTUS CDS 10669 10847 0.63 + 2 ID=LTnewLM_360005000.1:CDS:1;Parent=LTnewLM_360005000.1 ### LTnewLM_36 . contig 1 2729486 . + . Name=LTnewLM_CTG000037 LTnewLM_36 . polypeptide 10669 10847 . + . ID=LTnewLM_360005000.1:pep;Derives_from=LTnewLM_360005000.1;orthologous_to=LTnewLM_020005000.1;ortholog_cluster=OG0001849;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 19483 21927 1 - . ID=LTnewLM_360005100 LTnewLM_36 AUGUSTUS mRNA 19483 21927 1 - . ID=LTnewLM_360005100.1;Parent=LTnewLM_360005100 LTnewLM_36 AUGUSTUS CDS 19483 21927 1 - 0 ID=LTnewLM_360005100.1:CDS:1;Parent=LTnewLM_360005100.1 ### LTnewLM_36 . polypeptide 19483 21927 . - . ID=LTnewLM_360005100.1:pep;Derives_from=LTnewLM_360005100.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_070019500.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_350005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 23733 24035 1 - . ID=LTnewLM_360005200 LTnewLM_36 AUGUSTUS mRNA 23733 24035 1 - . ID=LTnewLM_360005200.1;Parent=LTnewLM_360005200 LTnewLM_36 AUGUSTUS CDS 23733 24035 1 - 0 ID=LTnewLM_360005200.1:CDS:1;Parent=LTnewLM_360005200.1 ### LTnewLM_36 . polypeptide 23733 24035 . - . ID=LTnewLM_360005200.1:pep;Derives_from=LTnewLM_360005200.1;orthologous_to=LTnewLM_250031400.1,LTnewLM_350005200.1,LmjF.02.0020_mRNA,LmjF.25.2450_mRNA,LmjF.31.3180_mRNA,LmjF.35.1310_mRNA,LmjF.36.0020_mRNA;ortholog_cluster=OG0000027;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone/Centromere kinetochore component CENP-T histone fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808|Pfam:PF15511;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_36 Pfam protein_match 23754 23939 . - . Parent=LTnewLM_360005200.1:pep;Name=PF15511;signature_desc=Centromere kinetochore component CENP-T histone fold LTnewLM_36 Pfam protein_match 23769 23954 . - . Parent=LTnewLM_360005200.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_36 Pfam protein_match 23772 23939 . - . Parent=LTnewLM_360005200.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_36 AUGUSTUS gene 25978 26436 1 - . ID=LTnewLM_360005300 LTnewLM_36 AUGUSTUS mRNA 25978 26436 1 - . ID=LTnewLM_360005300.1;Parent=LTnewLM_360005300 LTnewLM_36 AUGUSTUS CDS 25978 26436 1 - 0 ID=LTnewLM_360005300.1:CDS:1;Parent=LTnewLM_360005300.1 ### LTnewLM_36 . polypeptide 25978 26436 . - . ID=LTnewLM_360005300.1:pep;Derives_from=LTnewLM_360005300.1;orthologous_to=LmjF.36.0030_mRNA;ortholog_cluster=OG0006126;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 28569 29867 1 - . ID=LTnewLM_360005400 LTnewLM_36 AUGUSTUS mRNA 28569 29867 1 - . ID=LTnewLM_360005400.1;Parent=LTnewLM_360005400 LTnewLM_36 AUGUSTUS CDS 28569 29867 1 - 0 ID=LTnewLM_360005400.1:CDS:1;Parent=LTnewLM_360005400.1 ### LTnewLM_36 . polypeptide 28569 29867 . - . ID=LTnewLM_360005400.1:pep;Derives_from=LTnewLM_360005400.1;orthologous_to=LmjF.36.0040_mRNA;ortholog_cluster=OG0006127;product=term%3DAmidohydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01979;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 28653 29678 . - . Parent=LTnewLM_360005400.1:pep;Name=PF01979;signature_desc=Amidohydrolase family;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 32004 33665 1 - . ID=LTnewLM_360005500 LTnewLM_36 AUGUSTUS mRNA 32004 33665 1 - . ID=LTnewLM_360005500.1;Parent=LTnewLM_360005500 LTnewLM_36 AUGUSTUS CDS 32004 33665 1 - 0 ID=LTnewLM_360005500.1:CDS:1;Parent=LTnewLM_360005500.1 ### LTnewLM_36 . polypeptide 32004 33665 . - . ID=LTnewLM_360005500.1:pep;Derives_from=LTnewLM_360005500.1;orthologous_to=LmjF.36.0050_mRNA;ortholog_cluster=OG0006128;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 32406 32492 . - . Parent=LTnewLM_360005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 32523 32624 . - . Parent=LTnewLM_360005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 32727 32777 . - . Parent=LTnewLM_360005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 32802 32894 . - . Parent=LTnewLM_360005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 33075 33152 . - . Parent=LTnewLM_360005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_36 AUGUSTUS gene 35399 37090 1 - . ID=LTnewLM_360005600 LTnewLM_36 AUGUSTUS mRNA 35399 37090 1 - . ID=LTnewLM_360005600.1;Parent=LTnewLM_360005600 LTnewLM_36 AUGUSTUS CDS 35399 37090 1 - 0 ID=LTnewLM_360005600.1:CDS:1;Parent=LTnewLM_360005600.1 ### LTnewLM_36 . polypeptide 35399 37090 . - . ID=LTnewLM_360005600.1:pep;Derives_from=LTnewLM_360005600.1;orthologous_to=LmjF.36.0060_mRNA;ortholog_cluster=OG0006129;product=term%3DFGGY family of carbohydrate kinases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02782;Ontology_term=GO:0016773,GO:0005975 LTnewLM_36 Pfam protein_match 35561 36202 . - . Parent=LTnewLM_360005600.1:pep;Name=PF02782;signature_desc=FGGY family of carbohydrate kinases%2C C-terminal domain;Ontology_term=GO:0016773,GO:0005975 ### LTnewLM_36 AUGUSTUS gene 37942 38912 0.44 - . ID=LTnewLM_360005700 LTnewLM_36 AUGUSTUS mRNA 37942 38912 0.44 - . ID=LTnewLM_360005700.1;Parent=LTnewLM_360005700 LTnewLM_36 AUGUSTUS CDS 37942 38820 0.44 - 0 ID=LTnewLM_360005700.1:CDS:1;Parent=LTnewLM_360005700.1 LTnewLM_36 AUGUSTUS CDS 38865 38912 0.46 - 0 ID=LTnewLM_360005700.1:CDS:2;Parent=LTnewLM_360005700.1 ### LTnewLM_36 . polypeptide 37942 38912 . - . ID=LTnewLM_360005700.1:pep;Derives_from=LTnewLM_360005700.1;orthologous_to=LmjF.36.0065_mRNA;ortholog_cluster=OG0006130;product=term%3DSAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02037 LTnewLM_36 Pfam protein_match 38322 38411 . - . Parent=LTnewLM_360005700.1:pep;Name=PF02037;signature_desc=SAP domain ### LTnewLM_36 AUGUSTUS gene 39856 40623 1 - . ID=LTnewLM_360005800 LTnewLM_36 AUGUSTUS mRNA 39856 40623 1 - . ID=LTnewLM_360005800.1;Parent=LTnewLM_360005800 LTnewLM_36 AUGUSTUS CDS 39856 40623 1 - 0 ID=LTnewLM_360005800.1:CDS:1;Parent=LTnewLM_360005800.1 ### LTnewLM_36 . polypeptide 39856 40623 . - . ID=LTnewLM_360005800.1:pep;Derives_from=LTnewLM_360005800.1;orthologous_to=LmjF.36.0070_mRNA;ortholog_cluster=OG0006131;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00515|Pfam:PF07719|Pfam:PF13181|Pfam:PF13174|Pfam:PF13176|Pfam:PF13432|Pfam:PF07720;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40075 40209 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 40135 40209 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40138 40209 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13176;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40153 40206 . - . Parent=LTnewLM_360005800.1:pep;Name=PF07720;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 40312 40407 . - . Parent=LTnewLM_360005800.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40312 40407 . - . Parent=LTnewLM_360005800.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 40315 40401 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13174;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40315 40407 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40528 40590 . - . Parent=LTnewLM_360005800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40528 40614 . - . Parent=LTnewLM_360005800.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 40528 40614 . - . Parent=LTnewLM_360005800.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat ### LTnewLM_36 AUGUSTUS gene 43621 44511 1 - . ID=LTnewLM_360005900 LTnewLM_36 AUGUSTUS mRNA 43621 44511 1 - . ID=LTnewLM_360005900.1;Parent=LTnewLM_360005900 LTnewLM_36 AUGUSTUS CDS 43621 44511 1 - 0 ID=LTnewLM_360005900.1:CDS:1;Parent=LTnewLM_360005900.1 ### LTnewLM_36 . polypeptide 43621 44511 . - . ID=LTnewLM_360005900.1:pep;Derives_from=LTnewLM_360005900.1;orthologous_to=LmjF.36.0080_mRNA;ortholog_cluster=OG0006132;product=term%3DLeucine carboxyl methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04072;Ontology_term=GO:0032259,GO:0008168 LTnewLM_36 Pfam protein_match 43984 44454 . - . Parent=LTnewLM_360005900.1:pep;Name=PF04072;signature_desc=Leucine carboxyl methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_36 AUGUSTUS gene 45281 48451 1 - . ID=LTnewLM_360006000 LTnewLM_36 AUGUSTUS mRNA 45281 48451 1 - . ID=LTnewLM_360006000.1;Parent=LTnewLM_360006000 LTnewLM_36 AUGUSTUS CDS 45281 48451 1 - 0 ID=LTnewLM_360006000.1:CDS:1;Parent=LTnewLM_360006000.1 ### LTnewLM_36 . polypeptide 45281 48451 . - . ID=LTnewLM_360006000.1:pep;Derives_from=LTnewLM_360006000.1;orthologous_to=LmjF.36.0090_mRNA;ortholog_cluster=OG0006133;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 49174 51033 1 - . ID=LTnewLM_360006100 LTnewLM_36 AUGUSTUS mRNA 49174 51033 1 - . ID=LTnewLM_360006100.1;Parent=LTnewLM_360006100 LTnewLM_36 AUGUSTUS CDS 49174 51033 1 - 0 ID=LTnewLM_360006100.1:CDS:1;Parent=LTnewLM_360006100.1 ### LTnewLM_36 . polypeptide 49174 51033 . - . ID=LTnewLM_360006100.1:pep;Derives_from=LTnewLM_360006100.1;orthologous_to=LmjF.36.0100_mRNA;ortholog_cluster=OG0006134;product=term%3DimpB/mucB/samB family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00817;Ontology_term=GO:0003887,GO:0006281,GO:0003684 LTnewLM_36 Pfam protein_match 50398 50850 . - . Parent=LTnewLM_360006100.1:pep;Name=PF00817;signature_desc=impB/mucB/samB family;Ontology_term=GO:0003684,GO:0003887,GO:0006281 ### LTnewLM_36 AUGUSTUS gene 52203 54752 1 - . ID=LTnewLM_360006200 LTnewLM_36 AUGUSTUS mRNA 52203 54752 1 - . ID=LTnewLM_360006200.1;Parent=LTnewLM_360006200 LTnewLM_36 AUGUSTUS CDS 52203 54752 1 - 0 ID=LTnewLM_360006200.1:CDS:1;Parent=LTnewLM_360006200.1 ### LTnewLM_36 . polypeptide 52203 54752 . - . ID=LTnewLM_360006200.1:pep;Derives_from=LTnewLM_360006200.1;orthologous_to=LmjF.36.0110_mRNA;ortholog_cluster=OG0006135;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 55598 56569 1 - . ID=LTnewLM_360006300 LTnewLM_36 AUGUSTUS mRNA 55598 56569 1 - . ID=LTnewLM_360006300.1;Parent=LTnewLM_360006300 LTnewLM_36 AUGUSTUS CDS 55598 56569 1 - 0 ID=LTnewLM_360006300.1:CDS:1;Parent=LTnewLM_360006300.1 ### LTnewLM_36 . polypeptide 55598 56569 . - . ID=LTnewLM_360006300.1:pep;Derives_from=LTnewLM_360006300.1;orthologous_to=LmjF.36.0120_mRNA;ortholog_cluster=OG0006136;product=term%3DmRNA capping enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03291 LTnewLM_36 Pfam protein_match 55697 56521 . - . Parent=LTnewLM_360006300.1:pep;Name=PF03291;signature_desc=mRNA capping enzyme ### LTnewLM_36 AUGUSTUS gene 57453 58559 1 - . ID=LTnewLM_360006400 LTnewLM_36 AUGUSTUS mRNA 57453 58559 1 - . ID=LTnewLM_360006400.1;Parent=LTnewLM_360006400 LTnewLM_36 AUGUSTUS CDS 57453 58559 1 - 0 ID=LTnewLM_360006400.1:CDS:1;Parent=LTnewLM_360006400.1 ### LTnewLM_36 . polypeptide 57453 58559 . - . ID=LTnewLM_360006400.1:pep;Derives_from=LTnewLM_360006400.1;orthologous_to=LmjF.36.0130_mRNA;ortholog_cluster=OG0006137;product=term%3DPUB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09409 LTnewLM_36 Pfam protein_match 57507 57719 . - . Parent=LTnewLM_360006400.1:pep;Name=PF09409;signature_desc=PUB domain ### LTnewLM_36 AUGUSTUS gene 59366 61300 1 - . ID=LTnewLM_360006500 LTnewLM_36 AUGUSTUS mRNA 59366 61300 1 - . ID=LTnewLM_360006500.1;Parent=LTnewLM_360006500 LTnewLM_36 AUGUSTUS CDS 59366 61300 1 - 0 ID=LTnewLM_360006500.1:CDS:1;Parent=LTnewLM_360006500.1 ### LTnewLM_36 . polypeptide 59366 61300 . - . ID=LTnewLM_360006500.1:pep;Derives_from=LTnewLM_360006500.1;orthologous_to=LmjF.36.0140_mRNA;ortholog_cluster=OG0006138;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 63544 65001 1 - . ID=LTnewLM_360006600 LTnewLM_36 AUGUSTUS mRNA 63544 65001 1 - . ID=LTnewLM_360006600.1;Parent=LTnewLM_360006600 LTnewLM_36 AUGUSTUS CDS 63544 65001 1 - 0 ID=LTnewLM_360006600.1:CDS:1;Parent=LTnewLM_360006600.1 ### LTnewLM_36 . polypeptide 63544 65001 . - . ID=LTnewLM_360006600.1:pep;Derives_from=LTnewLM_360006600.1;orthologous_to=LmjF.36.0150_mRNA;ortholog_cluster=OG0006139;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_36 Pfam protein_match 63664 64224 . - . Parent=LTnewLM_360006600.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_36 AUGUSTUS gene 65541 66398 1 - . ID=LTnewLM_360006700 LTnewLM_36 AUGUSTUS mRNA 65541 66398 1 - . ID=LTnewLM_360006700.1;Parent=LTnewLM_360006700 LTnewLM_36 AUGUSTUS CDS 65541 66398 1 - 0 ID=LTnewLM_360006700.1:CDS:1;Parent=LTnewLM_360006700.1 ### LTnewLM_36 . polypeptide 65541 66398 . - . ID=LTnewLM_360006700.1:pep;Derives_from=LTnewLM_360006700.1;orthologous_to=LmjF.36.0160_mRNA;ortholog_cluster=OG0006140;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 68299 68766 1 - . ID=LTnewLM_360006800 LTnewLM_36 AUGUSTUS mRNA 68299 68766 1 - . ID=LTnewLM_360006800.1;Parent=LTnewLM_360006800 LTnewLM_36 AUGUSTUS CDS 68299 68766 1 - 0 ID=LTnewLM_360006800.1:CDS:1;Parent=LTnewLM_360006800.1 ### LTnewLM_36 . polypeptide 68299 68766 . - . ID=LTnewLM_360006800.1:pep;Derives_from=LTnewLM_360006800.1;orthologous_to=LmjF.36.0170_mRNA;ortholog_cluster=OG0006141;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 69369 71906 1 - . ID=LTnewLM_360006900 LTnewLM_36 AUGUSTUS mRNA 69369 71906 1 - . ID=LTnewLM_360006900.1;Parent=LTnewLM_360006900 LTnewLM_36 AUGUSTUS CDS 69369 71906 1 - 0 ID=LTnewLM_360006900.1:CDS:1;Parent=LTnewLM_360006900.1 ### LTnewLM_36 . polypeptide 69369 71906 . - . ID=LTnewLM_360006900.1:pep;Derives_from=LTnewLM_360006900.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 69471 69731 . - . Parent=LTnewLM_360006900.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_36 Pfam protein_match 69738 70067 . - . Parent=LTnewLM_360006900.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 70257 70442 . - . Parent=LTnewLM_360006900.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 70497 70721 . - . Parent=LTnewLM_360006900.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 70884 71855 . - . Parent=LTnewLM_360006900.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_36 AUGUSTUS gene 73006 75543 1 - . ID=LTnewLM_360007000 LTnewLM_36 AUGUSTUS mRNA 73006 75543 1 - . ID=LTnewLM_360007000.1;Parent=LTnewLM_360007000 LTnewLM_36 AUGUSTUS CDS 73006 75543 1 - 0 ID=LTnewLM_360007000.1:CDS:1;Parent=LTnewLM_360007000.1 ### LTnewLM_36 . polypeptide 73006 75543 . - . ID=LTnewLM_360007000.1:pep;Derives_from=LTnewLM_360007000.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 73108 73368 . - . Parent=LTnewLM_360007000.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_36 Pfam protein_match 73375 73704 . - . Parent=LTnewLM_360007000.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 73894 74079 . - . Parent=LTnewLM_360007000.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 74134 74358 . - . Parent=LTnewLM_360007000.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 74521 75492 . - . Parent=LTnewLM_360007000.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_36 AUGUSTUS gene 76643 79180 1 - . ID=LTnewLM_360007100 LTnewLM_36 AUGUSTUS mRNA 76643 79180 1 - . ID=LTnewLM_360007100.1;Parent=LTnewLM_360007100 LTnewLM_36 AUGUSTUS CDS 76643 79180 1 - 0 ID=LTnewLM_360007100.1:CDS:1;Parent=LTnewLM_360007100.1 ### LTnewLM_36 . polypeptide 76643 79180 . - . ID=LTnewLM_360007100.1:pep;Derives_from=LTnewLM_360007100.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007200.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 76745 77005 . - . Parent=LTnewLM_360007100.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_36 Pfam protein_match 77012 77341 . - . Parent=LTnewLM_360007100.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 77531 77716 . - . Parent=LTnewLM_360007100.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 77771 77995 . - . Parent=LTnewLM_360007100.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 78158 79129 . - . Parent=LTnewLM_360007100.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_36 AUGUSTUS gene 80283 82820 1 - . ID=LTnewLM_360007200 LTnewLM_36 AUGUSTUS mRNA 80283 82820 1 - . ID=LTnewLM_360007200.1;Parent=LTnewLM_360007200 LTnewLM_36 AUGUSTUS CDS 80283 82820 1 - 0 ID=LTnewLM_360007200.1:CDS:1;Parent=LTnewLM_360007200.1 ### LTnewLM_36 . polypeptide 80283 82820 . - . ID=LTnewLM_360007200.1:pep;Derives_from=LTnewLM_360007200.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007300.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 80385 80645 . - . Parent=LTnewLM_360007200.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_36 Pfam protein_match 80652 80981 . - . Parent=LTnewLM_360007200.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 81171 81356 . - . Parent=LTnewLM_360007200.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 81411 81635 . - . Parent=LTnewLM_360007200.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 81798 82769 . - . Parent=LTnewLM_360007200.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_36 AUGUSTUS gene 83917 86455 0.47 - . ID=LTnewLM_360007300 LTnewLM_36 AUGUSTUS mRNA 83917 86455 0.47 - . ID=LTnewLM_360007300.1;Parent=LTnewLM_360007300 LTnewLM_36 AUGUSTUS CDS 83917 84549 0.47 - 0 ID=LTnewLM_360007300.1:CDS:1;Parent=LTnewLM_360007300.1 LTnewLM_36 AUGUSTUS CDS 84608 86455 1 - 0 ID=LTnewLM_360007300.1:CDS:2;Parent=LTnewLM_360007300.1 ### LTnewLM_36 . polypeptide 83917 86455 . - . ID=LTnewLM_360007300.1:pep;Derives_from=LTnewLM_360007300.1;orthologous_to=LTnewLM_000006200.1,LTnewLM_000006300.1,LTnewLM_000006400.1,LTnewLM_000006500.1,LTnewLM_000006700.1,LTnewLM_000006800.1,LTnewLM_360006900.1,LTnewLM_360007000.1,LTnewLM_360007100.1,LTnewLM_360007200.1,LmjF.36.0180_mRNA,LmjF.36.0190_mRNA;ortholog_cluster=OG0000011;product=term%3DElongation factor Tu GTP binding domain/Elongation factor Tu domain 2/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF03144|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 84077 84337 . - . Parent=LTnewLM_360007300.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus LTnewLM_36 Pfam protein_match 84344 84646 . - . Parent=LTnewLM_360007300.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 84806 84991 . - . Parent=LTnewLM_360007300.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 85046 85270 . - . Parent=LTnewLM_360007300.1:pep;Name=PF03144;signature_desc=Elongation factor Tu domain 2;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 85433 86404 . - . Parent=LTnewLM_360007300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_36 AUGUSTUS gene 87027 87704 1 - . ID=LTnewLM_360007400 LTnewLM_36 AUGUSTUS mRNA 87027 87704 1 - . ID=LTnewLM_360007400.1;Parent=LTnewLM_360007400 LTnewLM_36 AUGUSTUS CDS 87027 87704 1 - 0 ID=LTnewLM_360007400.1:CDS:1;Parent=LTnewLM_360007400.1 ### LTnewLM_36 . polypeptide 87027 87704 . - . ID=LTnewLM_360007400.1:pep;Derives_from=LTnewLM_360007400.1;orthologous_to=LmjF.36.0200_mRNA;ortholog_cluster=OG0006142;product=term%3DSignal peptidase%2C peptidase S26%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10502 LTnewLM_36 Pfam protein_match 87090 87605 . - . Parent=LTnewLM_360007400.1:pep;Name=PF10502;signature_desc=Signal peptidase%2C peptidase S26 ### LTnewLM_36 AUGUSTUS gene 90450 91871 1 - . ID=LTnewLM_360007500 LTnewLM_36 AUGUSTUS mRNA 90450 91871 1 - . ID=LTnewLM_360007500.1;Parent=LTnewLM_360007500 LTnewLM_36 AUGUSTUS CDS 90450 91871 1 - 0 ID=LTnewLM_360007500.1:CDS:1;Parent=LTnewLM_360007500.1 ### LTnewLM_36 . polypeptide 90450 91871 . - . ID=LTnewLM_360007500.1:pep;Derives_from=LTnewLM_360007500.1;orthologous_to=LmjF.36.0210_mRNA;ortholog_cluster=OG0006143;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 90612 90923 . - . Parent=LTnewLM_360007500.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 93460 94248 1 - . ID=LTnewLM_360007600 LTnewLM_36 AUGUSTUS mRNA 93460 94248 1 - . ID=LTnewLM_360007600.1;Parent=LTnewLM_360007600 LTnewLM_36 AUGUSTUS CDS 93460 94248 1 - 0 ID=LTnewLM_360007600.1:CDS:1;Parent=LTnewLM_360007600.1 ### LTnewLM_36 . polypeptide 93460 94248 . - . ID=LTnewLM_360007600.1:pep;Derives_from=LTnewLM_360007600.1;orthologous_to=LmjF.36.0220_mRNA;ortholog_cluster=OG0006144;product=term%3DGlycosyl transferase family 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00535 LTnewLM_36 Pfam protein_match 93733 94239 . - . Parent=LTnewLM_360007600.1:pep;Name=PF00535;signature_desc=Glycosyl transferase family 2 ### LTnewLM_36 AUGUSTUS gene 95666 95995 1 - . ID=LTnewLM_360007700 LTnewLM_36 AUGUSTUS mRNA 95666 95995 1 - . ID=LTnewLM_360007700.1;Parent=LTnewLM_360007700 LTnewLM_36 AUGUSTUS CDS 95666 95995 1 - 0 ID=LTnewLM_360007700.1:CDS:1;Parent=LTnewLM_360007700.1 ### LTnewLM_36 . polypeptide 95666 95995 . - . ID=LTnewLM_360007700.1:pep;Derives_from=LTnewLM_360007700.1;orthologous_to=LmjF.36.0230_mRNA;ortholog_cluster=OG0006145;product=term%3DFKBP-type peptidyl-prolyl cis-trans isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00254;Ontology_term=GO:0006457 LTnewLM_36 Pfam protein_match 95681 95953 . - . Parent=LTnewLM_360007700.1:pep;Name=PF00254;signature_desc=FKBP-type peptidyl-prolyl cis-trans isomerase;Ontology_term=GO:0006457 ### LTnewLM_36 AUGUSTUS gene 96952 97626 1 - . ID=LTnewLM_360007800 LTnewLM_36 AUGUSTUS mRNA 96952 97626 1 - . ID=LTnewLM_360007800.1;Parent=LTnewLM_360007800 LTnewLM_36 AUGUSTUS CDS 96952 97626 1 - 0 ID=LTnewLM_360007800.1:CDS:1;Parent=LTnewLM_360007800.1 ### LTnewLM_36 . polypeptide 96952 97626 . - . ID=LTnewLM_360007800.1:pep;Derives_from=LTnewLM_360007800.1;orthologous_to=LmjF.36.0240_mRNA;ortholog_cluster=OG0006146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 98952 100586 1 - . ID=LTnewLM_360007900 LTnewLM_36 AUGUSTUS mRNA 98952 100586 1 - . ID=LTnewLM_360007900.1;Parent=LTnewLM_360007900 LTnewLM_36 AUGUSTUS CDS 98952 100586 1 - 0 ID=LTnewLM_360007900.1:CDS:1;Parent=LTnewLM_360007900.1 ### LTnewLM_36 . polypeptide 98952 100586 . - . ID=LTnewLM_360007900.1:pep;Derives_from=LTnewLM_360007900.1;orthologous_to=LmjF.36.0250_mRNA;ortholog_cluster=OG0006147;product=term%3DRNA polymerase I-associated factor PAF67%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10255;Ontology_term=GO:0005737,GO:0005852,GO:0003743 LTnewLM_36 Pfam protein_match 99249 100274 . - . Parent=LTnewLM_360007900.1:pep;Name=PF10255;signature_desc=RNA polymerase I-associated factor PAF67;Ontology_term=GO:0003743,GO:0005737,GO:0005852 ### LTnewLM_36 AUGUSTUS gene 103802 105265 1 - . ID=LTnewLM_360008000 LTnewLM_36 AUGUSTUS mRNA 103802 105265 1 - . ID=LTnewLM_360008000.1;Parent=LTnewLM_360008000 LTnewLM_36 AUGUSTUS CDS 103802 105265 1 - 0 ID=LTnewLM_360008000.1:CDS:1;Parent=LTnewLM_360008000.1 ### LTnewLM_36 . polypeptide 103802 105265 . - . ID=LTnewLM_360008000.1:pep;Derives_from=LTnewLM_360008000.1;orthologous_to=LmjF.36.0260_mRNA;ortholog_cluster=OG0006148;product=term%3DFGGY family of carbohydrate kinases%2C N-terminal domain/FGGY family of carbohydrate kinases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00370|Pfam:PF02782;Ontology_term=GO:0016773,GO:0005975 LTnewLM_36 Pfam protein_match 103961 104521 . - . Parent=LTnewLM_360008000.1:pep;Name=PF02782;signature_desc=FGGY family of carbohydrate kinases%2C C-terminal domain;Ontology_term=GO:0016773,GO:0005975 LTnewLM_36 Pfam protein_match 104549 105265 . - . Parent=LTnewLM_360008000.1:pep;Name=PF00370;signature_desc=FGGY family of carbohydrate kinases%2C N-terminal domain;Ontology_term=GO:0016773,GO:0005975 ### LTnewLM_36 AUGUSTUS gene 106138 108588 1 - . ID=LTnewLM_360008100 LTnewLM_36 AUGUSTUS mRNA 106138 108588 1 - . ID=LTnewLM_360008100.1;Parent=LTnewLM_360008100 LTnewLM_36 AUGUSTUS CDS 106138 108588 1 - 0 ID=LTnewLM_360008100.1:CDS:1;Parent=LTnewLM_360008100.1 ### LTnewLM_36 . polypeptide 106138 108588 . - . ID=LTnewLM_360008100.1:pep;Derives_from=LTnewLM_360008100.1;orthologous_to=LmjF.36.0270_mRNA;ortholog_cluster=OG0006149;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 109622 110227 1 - . ID=LTnewLM_360008200 LTnewLM_36 AUGUSTUS mRNA 109622 110227 1 - . ID=LTnewLM_360008200.1;Parent=LTnewLM_360008200 LTnewLM_36 AUGUSTUS CDS 109622 110227 1 - 0 ID=LTnewLM_360008200.1:CDS:1;Parent=LTnewLM_360008200.1 ### LTnewLM_36 . polypeptide 109622 110227 . - . ID=LTnewLM_360008200.1:pep;Derives_from=LTnewLM_360008200.1;orthologous_to=LmjF.36.0280_mRNA;ortholog_cluster=OG0006150;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 110708 111658 . - . ID=LTnewLM_360008300.1:pep;Derives_from=LTnewLM_360008300.1;orthologous_to=LmjF.36.0290.1_mRNA,LmjF.36.0290.2_mRNA;ortholog_cluster=OG0000548;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 110708 111812 . - . ID=LTnewLM_360008300.2:pep;Derives_from=LTnewLM_360008300.2;product=term%3Dhypothetical protein ### LTnewLM_36 . pseudogene 110708 111835 . - . ID=LTnewLM_360008300:pseudogene;coverage=0.999;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.0290_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 110708 111798 . - . ID=LTnewLM_360008300.1;Parent=LTnewLM_360008300:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 110708 111658 . - . ID=LTnewLM_360008300.1:pseudogenic_exon:1;Parent=LTnewLM_360008300.1;extra_copy_number=0 LTnewLM_36 . pseudogenic_transcript 110708 111835 . - . ID=LTnewLM_360008300.2;Parent=LTnewLM_360008300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 110708 111812 . - . ID=LTnewLM_360008300.2:pseudogenic_exon:1;Parent=LTnewLM_360008300.2;extra_copy_number=0 ### LTnewLM_36 AUGUSTUS gene 112397 113395 1 - . ID=LTnewLM_360008400 LTnewLM_36 AUGUSTUS mRNA 112397 113395 1 - . ID=LTnewLM_360008400.1;Parent=LTnewLM_360008400 LTnewLM_36 AUGUSTUS CDS 112397 113395 1 - 0 ID=LTnewLM_360008400.1:CDS:1;Parent=LTnewLM_360008400.1 ### LTnewLM_36 . polypeptide 112397 113395 . - . ID=LTnewLM_360008400.1:pep;Derives_from=LTnewLM_360008400.1;orthologous_to=LmjF.36.0300_mRNA;ortholog_cluster=OG0006151;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 112730 113089 . - . Parent=LTnewLM_360008400.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 114375 115067 1 - . ID=LTnewLM_360008500 LTnewLM_36 AUGUSTUS mRNA 114375 115067 1 - . ID=LTnewLM_360008500.1;Parent=LTnewLM_360008500 LTnewLM_36 AUGUSTUS CDS 114375 115067 1 - 0 ID=LTnewLM_360008500.1:CDS:1;Parent=LTnewLM_360008500.1 ### LTnewLM_36 . polypeptide 114375 115067 . - . ID=LTnewLM_360008500.1:pep;Derives_from=LTnewLM_360008500.1;orthologous_to=LmjF.36.0310_mRNA;ortholog_cluster=OG0006152;product=term%3DESCRT-II complex subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05871 LTnewLM_36 Pfam protein_match 114609 115040 . - . Parent=LTnewLM_360008500.1:pep;Name=PF05871;signature_desc=ESCRT-II complex subunit ### LTnewLM_36 AUGUSTUS gene 116307 116927 1 - . ID=LTnewLM_360008600 LTnewLM_36 AUGUSTUS mRNA 116307 116927 1 - . ID=LTnewLM_360008600.1;Parent=LTnewLM_360008600 LTnewLM_36 AUGUSTUS CDS 116307 116927 1 - 0 ID=LTnewLM_360008600.1:CDS:1;Parent=LTnewLM_360008600.1 ### LTnewLM_36 . polypeptide 116307 116927 . - . ID=LTnewLM_360008600.1:pep;Derives_from=LTnewLM_360008600.1;orthologous_to=LmjF.36.0320_mRNA;ortholog_cluster=OG0006153;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_36 Pfam protein_match 116370 116924 . - . Parent=LTnewLM_360008600.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_36 AUGUSTUS gene 119832 121256 1 - . ID=LTnewLM_360008700 LTnewLM_36 AUGUSTUS mRNA 119832 121256 1 - . ID=LTnewLM_360008700.1;Parent=LTnewLM_360008700 LTnewLM_36 AUGUSTUS CDS 119832 121256 1 - 0 ID=LTnewLM_360008700.1:CDS:1;Parent=LTnewLM_360008700.1 ### LTnewLM_36 . polypeptide 119832 121256 . - . ID=LTnewLM_360008700.1:pep;Derives_from=LTnewLM_360008700.1;orthologous_to=LmjF.36.0330_mRNA;ortholog_cluster=OG0006154;product=term%3DRibonuclease HII%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01351 LTnewLM_36 Pfam protein_match 119877 120197 . - . Parent=LTnewLM_360008700.1:pep;Name=PF01351;signature_desc=Ribonuclease HII ### LTnewLM_36 Liftoff gene 122501 122692 . - . ID=LTnewLM_360008800;coverage=1.0;sequence_ID=0.979;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.0340_0 LTnewLM_36 Liftoff mRNA 122501 122692 . - . ID=LTnewLM_360008800.1;Parent=LTnewLM_360008800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 122501 122692 . - 0 ID=LTnewLM_360008800.1:CDS:1;Parent=LTnewLM_360008800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 122501 122692 . - . ID=LTnewLM_360008800.1:pep;Derives_from=LTnewLM_360008800.1;orthologous_to=LmjF.36.0340_mRNA;ortholog_cluster=OG0006155;product=term%3DNucleolar RNA-binding protein%2C Nop10p family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04135;Ontology_term=GO:0030515,GO:0042254,GO:0072588,GO:0001522 LTnewLM_36 Pfam protein_match 122543 122671 . - . Parent=LTnewLM_360008800.1:pep;Name=PF04135;signature_desc=Nucleolar RNA-binding protein%2C Nop10p family;Ontology_term=GO:0030515,GO:0001522,GO:0042254,GO:0072588 ### LTnewLM_36 AUGUSTUS gene 124696 126207 1 - . ID=LTnewLM_360008900 LTnewLM_36 AUGUSTUS mRNA 124696 126207 1 - . ID=LTnewLM_360008900.1;Parent=LTnewLM_360008900 LTnewLM_36 AUGUSTUS CDS 124696 126207 1 - 0 ID=LTnewLM_360008900.1:CDS:1;Parent=LTnewLM_360008900.1 ### LTnewLM_36 . polypeptide 124696 126207 . - . ID=LTnewLM_360008900.1:pep;Derives_from=LTnewLM_360008900.1;orthologous_to=LmjF.36.0350_mRNA;ortholog_cluster=OG0006156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 127446 128225 1 - . ID=LTnewLM_360009000 LTnewLM_36 AUGUSTUS mRNA 127446 128225 1 - . ID=LTnewLM_360009000.1;Parent=LTnewLM_360009000 LTnewLM_36 AUGUSTUS CDS 127446 128225 1 - 0 ID=LTnewLM_360009000.1:CDS:1;Parent=LTnewLM_360009000.1 ### LTnewLM_36 . polypeptide 127446 128225 . - . ID=LTnewLM_360009000.1:pep;Derives_from=LTnewLM_360009000.1;orthologous_to=LmjF.36.0360_mRNA;ortholog_cluster=OG0006157;product=term%3DIntegral membrane protein EMC3/TMCO1-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01956;Ontology_term=GO:0016020 LTnewLM_36 Pfam protein_match 127665 128210 . - . Parent=LTnewLM_360009000.1:pep;Name=PF01956;signature_desc=Integral membrane protein EMC3/TMCO1-like;Ontology_term=GO:0016020 ### LTnewLM_36 AUGUSTUS gene 129255 130622 1 - . ID=LTnewLM_360009100 LTnewLM_36 AUGUSTUS mRNA 129255 130622 1 - . ID=LTnewLM_360009100.1;Parent=LTnewLM_360009100 LTnewLM_36 AUGUSTUS CDS 129255 130622 1 - 0 ID=LTnewLM_360009100.1:CDS:1;Parent=LTnewLM_360009100.1 ### LTnewLM_36 . polypeptide 129255 130622 . - . ID=LTnewLM_360009100.1:pep;Derives_from=LTnewLM_360009100.1;orthologous_to=LmjF.36.0370_mRNA;ortholog_cluster=OG0006158;product=term%3DPhosphatidylinositol-4-phosphate 5-Kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01504;Ontology_term=GO:0046488,GO:0016307 LTnewLM_36 Pfam protein_match 129300 130271 . - . Parent=LTnewLM_360009100.1:pep;Name=PF01504;signature_desc=Phosphatidylinositol-4-phosphate 5-Kinase;Ontology_term=GO:0016307,GO:0046488 ### LTnewLM_36 . pseudogene 131189 131858 . - . ID=LTnewLM_360009200:pseudogene;coverage=1.0;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0380_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 131189 131858 . - . ID=LTnewLM_360009200.1;Parent=LTnewLM_360009200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 131189 131858 . - . ID=LTnewLM_360009200.1:pseudogenic_exon:1;Parent=LTnewLM_360009200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 131189 131858 . - . ID=LTnewLM_360009200.1:pep;Derives_from=LTnewLM_360009200.1;orthologous_to=LmjF.36.0380_mRNA;ortholog_cluster=OG0007679;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 135333 137324 1 - . ID=LTnewLM_360009300 LTnewLM_36 AUGUSTUS mRNA 135333 137324 1 - . ID=LTnewLM_360009300.1;Parent=LTnewLM_360009300 LTnewLM_36 AUGUSTUS CDS 135333 137324 1 - 0 ID=LTnewLM_360009300.1:CDS:1;Parent=LTnewLM_360009300.1 ### LTnewLM_36 . polypeptide 135333 137324 . - . ID=LTnewLM_360009300.1:pep;Derives_from=LTnewLM_360009300.1;orthologous_to=LmjF.36.0390_mRNA;ortholog_cluster=OG0006159;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 138567 139070 1 - . ID=LTnewLM_360009400 LTnewLM_36 AUGUSTUS mRNA 138567 139070 1 - . ID=LTnewLM_360009400.1;Parent=LTnewLM_360009400 LTnewLM_36 AUGUSTUS CDS 138567 139070 1 - 0 ID=LTnewLM_360009400.1:CDS:1;Parent=LTnewLM_360009400.1 ### LTnewLM_36 . polypeptide 138567 139070 . - . ID=LTnewLM_360009400.1:pep;Derives_from=LTnewLM_360009400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 139721 141061 1 - . ID=LTnewLM_360009500 LTnewLM_36 AUGUSTUS mRNA 139721 141061 1 - . ID=LTnewLM_360009500.1;Parent=LTnewLM_360009500 LTnewLM_36 AUGUSTUS CDS 139721 141061 1 - 0 ID=LTnewLM_360009500.1:CDS:1;Parent=LTnewLM_360009500.1 ### LTnewLM_36 . polypeptide 139721 141061 . - . ID=LTnewLM_360009500.1:pep;Derives_from=LTnewLM_360009500.1;orthologous_to=LmjF.36.0400_mRNA;ortholog_cluster=OG0006160;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 142566 143162 1 - . ID=LTnewLM_360009600 LTnewLM_36 AUGUSTUS mRNA 142566 143162 1 - . ID=LTnewLM_360009600.1;Parent=LTnewLM_360009600 LTnewLM_36 AUGUSTUS CDS 142566 143162 1 - 0 ID=LTnewLM_360009600.1:CDS:1;Parent=LTnewLM_360009600.1 ### LTnewLM_36 . polypeptide 142566 143162 . - . ID=LTnewLM_360009600.1:pep;Derives_from=LTnewLM_360009600.1;orthologous_to=LmjF.36.0410_mRNA;ortholog_cluster=OG0006161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 144300 145784 1 - . ID=LTnewLM_360009700 LTnewLM_36 AUGUSTUS mRNA 144300 145784 1 - . ID=LTnewLM_360009700.1;Parent=LTnewLM_360009700 LTnewLM_36 AUGUSTUS CDS 144300 145784 1 - 0 ID=LTnewLM_360009700.1:CDS:1;Parent=LTnewLM_360009700.1 ### LTnewLM_36 . polypeptide 144300 145784 . - . ID=LTnewLM_360009700.1:pep;Derives_from=LTnewLM_360009700.1;orthologous_to=LmjF.36.0420_mRNA;ortholog_cluster=OG0006162;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_36 Pfam protein_match 144324 145520 . - . Parent=LTnewLM_360009700.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_36 Pfam protein_match 145125 145517 . - . Parent=LTnewLM_360009700.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_36 AUGUSTUS gene 147855 148394 1 - . ID=LTnewLM_360009800 LTnewLM_36 AUGUSTUS mRNA 147855 148394 1 - . ID=LTnewLM_360009800.1;Parent=LTnewLM_360009800 LTnewLM_36 AUGUSTUS CDS 147855 148394 1 - 0 ID=LTnewLM_360009800.1:CDS:1;Parent=LTnewLM_360009800.1 ### LTnewLM_36 . polypeptide 147855 148394 . - . ID=LTnewLM_360009800.1:pep;Derives_from=LTnewLM_360009800.1;orthologous_to=LmjF.36.0430_mRNA;ortholog_cluster=OG0006163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 150519 151967 1 - . ID=LTnewLM_360009900 LTnewLM_36 AUGUSTUS mRNA 150519 151967 1 - . ID=LTnewLM_360009900.1;Parent=LTnewLM_360009900 LTnewLM_36 AUGUSTUS CDS 150519 151967 1 - 0 ID=LTnewLM_360009900.1:CDS:1;Parent=LTnewLM_360009900.1 ### LTnewLM_36 . polypeptide 150519 151967 . - . ID=LTnewLM_360009900.1:pep;Derives_from=LTnewLM_360009900.1;orthologous_to=LmjF.36.0440_mRNA;ortholog_cluster=OG0006164;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 154159 155745 1 - . ID=LTnewLM_360010000 LTnewLM_36 AUGUSTUS mRNA 154159 155745 1 - . ID=LTnewLM_360010000.1;Parent=LTnewLM_360010000 LTnewLM_36 AUGUSTUS CDS 154159 155745 1 - 0 ID=LTnewLM_360010000.1:CDS:1;Parent=LTnewLM_360010000.1 ### LTnewLM_36 . polypeptide 154159 155745 . - . ID=LTnewLM_360010000.1:pep;Derives_from=LTnewLM_360010000.1;orthologous_to=LmjF.36.0450_mRNA;ortholog_cluster=OG0006165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 157569 159422 1 - . ID=LTnewLM_360010100 LTnewLM_36 AUGUSTUS mRNA 157569 159422 1 - . ID=LTnewLM_360010100.1;Parent=LTnewLM_360010100 LTnewLM_36 AUGUSTUS CDS 157569 159422 1 - 0 ID=LTnewLM_360010100.1:CDS:1;Parent=LTnewLM_360010100.1 ### LTnewLM_36 . polypeptide 157569 159422 . - . ID=LTnewLM_360010100.1:pep;Derives_from=LTnewLM_360010100.1;orthologous_to=LmjF.36.0460_mRNA;ortholog_cluster=OG0006166;product=term%3DSec1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00995;Ontology_term=GO:0016192,GO:0006904 LTnewLM_36 Pfam protein_match 157587 159320 . - . Parent=LTnewLM_360010100.1:pep;Name=PF00995;signature_desc=Sec1 family;Ontology_term=GO:0006904,GO:0016192 ### LTnewLM_36 Liftoff gene 160375 161739 . - . ID=LTnewLM_360010200;coverage=0.997;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0470_0 LTnewLM_36 Liftoff mRNA 160375 161739 . - . ID=LTnewLM_360010200.1;Parent=LTnewLM_360010200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 160375 161739 . - 0 ID=LTnewLM_360010200.1:CDS:1;Parent=LTnewLM_360010200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 160375 161739 . - . ID=LTnewLM_360010200.1:pep;Derives_from=LTnewLM_360010200.1;orthologous_to=LmjF.36.0470_mRNA;ortholog_cluster=OG0006167;product=term%3DDihydrouridine synthase (Dus)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01207;Ontology_term=GO:0008033,GO:0055114,GO:0050660,GO:0017150 LTnewLM_36 Pfam protein_match 160771 161382 . - . Parent=LTnewLM_360010200.1:pep;Name=PF01207;signature_desc=Dihydrouridine synthase (Dus);Ontology_term=GO:0017150,GO:0050660,GO:0008033,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 163345 164022 1 - . ID=LTnewLM_360010300 LTnewLM_36 AUGUSTUS mRNA 163345 164022 1 - . ID=LTnewLM_360010300.1;Parent=LTnewLM_360010300 LTnewLM_36 AUGUSTUS CDS 163345 164022 1 - 0 ID=LTnewLM_360010300.1:CDS:1;Parent=LTnewLM_360010300.1 ### LTnewLM_36 . polypeptide 163345 164022 . - . ID=LTnewLM_360010300.1:pep;Derives_from=LTnewLM_360010300.1;orthologous_to=LmjF.36.0480_mRNA;ortholog_cluster=OG0006168;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 165848 166897 1 - . ID=LTnewLM_360010400 LTnewLM_36 AUGUSTUS mRNA 165848 166897 1 - . ID=LTnewLM_360010400.1;Parent=LTnewLM_360010400 LTnewLM_36 AUGUSTUS CDS 165848 166897 1 - 0 ID=LTnewLM_360010400.1:CDS:1;Parent=LTnewLM_360010400.1 ### LTnewLM_36 . polypeptide 165848 166897 . - . ID=LTnewLM_360010400.1:pep;Derives_from=LTnewLM_360010400.1;orthologous_to=LmjF.36.0490_mRNA;ortholog_cluster=OG0006169;product=term%3Dzinc-finger of a C2HC-type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13913 LTnewLM_36 Pfam protein_match 166532 166603 . - . Parent=LTnewLM_360010400.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_36 Pfam protein_match 166817 166882 . - . Parent=LTnewLM_360010400.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type ### LTnewLM_36 AUGUSTUS gene 168226 169758 1 - . ID=LTnewLM_360010500 LTnewLM_36 AUGUSTUS mRNA 168226 169758 1 - . ID=LTnewLM_360010500.1;Parent=LTnewLM_360010500 LTnewLM_36 AUGUSTUS CDS 168226 169758 1 - 0 ID=LTnewLM_360010500.1:CDS:1;Parent=LTnewLM_360010500.1 ### LTnewLM_36 . polypeptide 168226 169758 . - . ID=LTnewLM_360010500.1:pep;Derives_from=LTnewLM_360010500.1;orthologous_to=LmjF.36.0500_mRNA;ortholog_cluster=OG0006170;product=term%3DTetratricopeptide repeat/DnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF13181|Pfam:PF00226;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 168427 168630 . - . Parent=LTnewLM_360010500.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_36 Pfam protein_match 168691 168783 . - . Parent=LTnewLM_360010500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 168901 169122 . - . Parent=LTnewLM_360010500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 169513 169599 . - . Parent=LTnewLM_360010500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 169531 169692 . - . Parent=LTnewLM_360010500.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_36 AUGUSTUS gene 173217 175484 1 - . ID=LTnewLM_360010600 LTnewLM_36 AUGUSTUS mRNA 173217 175484 1 - . ID=LTnewLM_360010600.1;Parent=LTnewLM_360010600 LTnewLM_36 AUGUSTUS CDS 173217 175484 1 - 0 ID=LTnewLM_360010600.1:CDS:1;Parent=LTnewLM_360010600.1 ### LTnewLM_36 . polypeptide 173217 175484 . - . ID=LTnewLM_360010600.1:pep;Derives_from=LTnewLM_360010600.1;orthologous_to=LmjF.36.0510_mRNA;ortholog_cluster=OG0006171;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_36 Pfam protein_match 173583 173834 . - . Parent=LTnewLM_360010600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 173874 174119 . - . Parent=LTnewLM_360010600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 174177 174437 . - . Parent=LTnewLM_360010600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 174465 174728 . - . Parent=LTnewLM_360010600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 174789 175052 . - . Parent=LTnewLM_360010600.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_36 AUGUSTUS gene 176229 177563 1 - . ID=LTnewLM_360010700 LTnewLM_36 AUGUSTUS mRNA 176229 177563 1 - . ID=LTnewLM_360010700.1;Parent=LTnewLM_360010700 LTnewLM_36 AUGUSTUS CDS 176229 177563 1 - 0 ID=LTnewLM_360010700.1:CDS:1;Parent=LTnewLM_360010700.1 ### LTnewLM_36 . polypeptide 176229 177563 . - . ID=LTnewLM_360010700.1:pep;Derives_from=LTnewLM_360010700.1;orthologous_to=LmjF.36.0520_mRNA;ortholog_cluster=OG0006172;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 178482 179378 1 - . ID=LTnewLM_360010800 LTnewLM_36 AUGUSTUS mRNA 178482 179378 1 - . ID=LTnewLM_360010800.1;Parent=LTnewLM_360010800 LTnewLM_36 AUGUSTUS CDS 178482 179378 1 - 0 ID=LTnewLM_360010800.1:CDS:1;Parent=LTnewLM_360010800.1 ### LTnewLM_36 . polypeptide 178482 179378 . - . ID=LTnewLM_360010800.1:pep;Derives_from=LTnewLM_360010800.1;orthologous_to=LmjF.36.0530_mRNA;ortholog_cluster=OG0006173;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_36 Pfam protein_match 178560 179312 . - . Parent=LTnewLM_360010800.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_36 AUGUSTUS gene 179964 180389 1 - . ID=LTnewLM_360010900 LTnewLM_36 AUGUSTUS mRNA 179964 180389 1 - . ID=LTnewLM_360010900.1;Parent=LTnewLM_360010900 LTnewLM_36 AUGUSTUS CDS 179964 180389 1 - 0 ID=LTnewLM_360010900.1:CDS:1;Parent=LTnewLM_360010900.1 ### LTnewLM_36 . polypeptide 179964 180389 . - . ID=LTnewLM_360010900.1:pep;Derives_from=LTnewLM_360010900.1;orthologous_to=LmjF.36.0535_mRNA;ortholog_cluster=OG0006174;product=term%3DLSM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01423 LTnewLM_36 Pfam protein_match 180156 180338 . - . Parent=LTnewLM_360010900.1:pep;Name=PF01423;signature_desc=LSM domain ### LTnewLM_36 Liftoff gene 181484 182116 . + . ID=LTnewLM_360011000;coverage=1.0;sequence_ID=0.957;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.0537_0 LTnewLM_36 Liftoff mRNA 181484 182116 . + . ID=LTnewLM_360011000.1;Parent=LTnewLM_360011000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 181484 182116 . + 0 ID=LTnewLM_360011000.1:CDS:1;Parent=LTnewLM_360011000.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 181484 182116 . + . ID=LTnewLM_360011000.1:pep;Derives_from=LTnewLM_360011000.1;orthologous_to=LmjF.36.0537_mRNA;ortholog_cluster=OG0006175;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 182823 183776 1 + . ID=LTnewLM_360011100 LTnewLM_36 AUGUSTUS mRNA 182823 183776 1 + . ID=LTnewLM_360011100.1;Parent=LTnewLM_360011100 LTnewLM_36 AUGUSTUS CDS 182823 183776 1 + 0 ID=LTnewLM_360011100.1:CDS:1;Parent=LTnewLM_360011100.1 ### LTnewLM_36 . polypeptide 182823 183776 . + . ID=LTnewLM_360011100.1:pep;Derives_from=LTnewLM_360011100.1;orthologous_to=LmjF.36.0540_mRNA;ortholog_cluster=OG0006176;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/UBA/TS-N domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF00627;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 182826 183032 . + . Parent=LTnewLM_360011100.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 182829 183041 . + . Parent=LTnewLM_360011100.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 183654 183761 . + . Parent=LTnewLM_360011100.1:pep;Name=PF00627;signature_desc=UBA/TS-N domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 184525 185460 1 + . ID=LTnewLM_360011200 LTnewLM_36 AUGUSTUS mRNA 184525 185460 1 + . ID=LTnewLM_360011200.1;Parent=LTnewLM_360011200 LTnewLM_36 AUGUSTUS CDS 184525 185460 1 + 0 ID=LTnewLM_360011200.1:CDS:1;Parent=LTnewLM_360011200.1 ### LTnewLM_36 . polypeptide 184525 185460 . + . ID=LTnewLM_360011200.1:pep;Derives_from=LTnewLM_360011200.1;orthologous_to=LmjF.36.0550_mRNA;ortholog_cluster=OG0006177;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 184591 185439 . + . Parent=LTnewLM_360011200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 184603 185166 . + . Parent=LTnewLM_360011200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 186028 186954 1 + . ID=LTnewLM_360011300 LTnewLM_36 AUGUSTUS mRNA 186028 186954 1 + . ID=LTnewLM_360011300.1;Parent=LTnewLM_360011300 LTnewLM_36 AUGUSTUS CDS 186028 186954 1 + 0 ID=LTnewLM_360011300.1:CDS:1;Parent=LTnewLM_360011300.1 ### LTnewLM_36 . polypeptide 186028 186954 . + . ID=LTnewLM_360011300.1:pep;Derives_from=LTnewLM_360011300.1;orthologous_to=LmjF.36.0560_mRNA;ortholog_cluster=OG0006178;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 187822 190062 1 + . ID=LTnewLM_360011400 LTnewLM_36 AUGUSTUS mRNA 187822 190062 1 + . ID=LTnewLM_360011400.1;Parent=LTnewLM_360011400 LTnewLM_36 AUGUSTUS CDS 187822 190062 1 + 0 ID=LTnewLM_360011400.1:CDS:1;Parent=LTnewLM_360011400.1 ### LTnewLM_36 . polypeptide 187822 190062 . + . ID=LTnewLM_360011400.1:pep;Derives_from=LTnewLM_360011400.1;orthologous_to=LmjF.36.0570_mRNA;ortholog_cluster=OG0006179;product=term%3DElongation factor Tu GTP binding domain/Elongation Factor G%2C domain III/Elongation factor G%2C domain IV/Elongation factor G C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF14492|Pfam:PF03764|Pfam:PF00679;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 187903 188724 . + . Parent=LTnewLM_360011400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 LTnewLM_36 Pfam protein_match 189136 189357 . + . Parent=LTnewLM_360011400.1:pep;Name=PF14492;signature_desc=Elongation Factor G%2C domain III LTnewLM_36 Pfam protein_match 189361 189708 . + . Parent=LTnewLM_360011400.1:pep;Name=PF03764;signature_desc=Elongation factor G%2C domain IV;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 189748 189999 . + . Parent=LTnewLM_360011400.1:pep;Name=PF00679;signature_desc=Elongation factor G C-terminus ### LTnewLM_36 AUGUSTUS gene 193557 195035 1 + . ID=LTnewLM_360011500 LTnewLM_36 AUGUSTUS mRNA 193557 195035 1 + . ID=LTnewLM_360011500.1;Parent=LTnewLM_360011500 LTnewLM_36 AUGUSTUS CDS 193557 195035 1 + 0 ID=LTnewLM_360011500.1:CDS:1;Parent=LTnewLM_360011500.1 ### LTnewLM_36 . polypeptide 193557 195035 . + . ID=LTnewLM_360011500.1:pep;Derives_from=LTnewLM_360011500.1;orthologous_to=LmjF.36.0580_mRNA;ortholog_cluster=OG0006180;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 194118 194222 . + . Parent=LTnewLM_360011500.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 194247 194342 . + . Parent=LTnewLM_360011500.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 198713 199993 1 + . ID=LTnewLM_360011600 LTnewLM_36 AUGUSTUS mRNA 198713 199993 1 + . ID=LTnewLM_360011600.1;Parent=LTnewLM_360011600 LTnewLM_36 AUGUSTUS CDS 198713 199993 1 + 0 ID=LTnewLM_360011600.1:CDS:1;Parent=LTnewLM_360011600.1 ### LTnewLM_36 . polypeptide 198713 199993 . + . ID=LTnewLM_360011600.1:pep;Derives_from=LTnewLM_360011600.1;orthologous_to=LTnewLM_350042000.1,LmjF.35.3560.1_mRNA,LmjF.35.3560.2_mRNA;ortholog_cluster=OG0000253;product=term%3DCAP-Gly domain/CRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01302|Pfam:PF00650 LTnewLM_36 Pfam protein_match 198749 198964 . + . Parent=LTnewLM_360011600.1:pep;Name=PF01302;signature_desc=CAP-Gly domain LTnewLM_36 Pfam protein_match 199187 199657 . + . Parent=LTnewLM_360011600.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_36 Liftoff gene 202476 203135 . + . ID=LTnewLM_360011700;coverage=1.0;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0590_0 LTnewLM_36 Liftoff mRNA 202476 203135 . + . ID=LTnewLM_360011700.1;Parent=LTnewLM_360011700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 202476 203135 . + 0 ID=LTnewLM_360011700.1:CDS:1;Parent=LTnewLM_360011700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 202476 203135 . + . ID=LTnewLM_360011700.1:pep;Derives_from=LTnewLM_360011700.1;orthologous_to=LmjF.36.0590_mRNA;ortholog_cluster=OG0006181;product=term%3DEukaryotic initiation factor 4E%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01652;Ontology_term=GO:0003723,GO:0005737,GO:0006413,GO:0003743 LTnewLM_36 Pfam protein_match 202515 202994 . + . Parent=LTnewLM_360011700.1:pep;Name=PF01652;signature_desc=Eukaryotic initiation factor 4E;Ontology_term=GO:0003723,GO:0003743,GO:0006413,GO:0005737 ### LTnewLM_36 AUGUSTUS gene 205269 205727 1 + . ID=LTnewLM_360011800 LTnewLM_36 AUGUSTUS mRNA 205269 205727 1 + . ID=LTnewLM_360011800.1;Parent=LTnewLM_360011800 LTnewLM_36 AUGUSTUS CDS 205269 205727 1 + 0 ID=LTnewLM_360011800.1:CDS:1;Parent=LTnewLM_360011800.1 ### LTnewLM_36 . polypeptide 205269 205727 . + . ID=LTnewLM_360011800.1:pep;Derives_from=LTnewLM_360011800.1;orthologous_to=LTnewLM_140020500.1,LmjF.14.1270_mRNA;ortholog_cluster=OG0000335;product=term%3DUbiquitin family/Ribosomal protein S27a%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00240|Pfam:PF01599;Ontology_term=GO:0003735,GO:0005622,GO:0006412,GO:0005840,GO:0005515 LTnewLM_36 Pfam protein_match 205275 205460 . + . Parent=LTnewLM_360011800.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 205560 205703 . + . Parent=LTnewLM_360011800.1:pep;Name=PF01599;signature_desc=Ribosomal protein S27a;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 206763 207677 1 + . ID=LTnewLM_360011900 LTnewLM_36 AUGUSTUS mRNA 206763 207677 1 + . ID=LTnewLM_360011900.1;Parent=LTnewLM_360011900 LTnewLM_36 AUGUSTUS CDS 206763 207677 1 + 0 ID=LTnewLM_360011900.1:CDS:1;Parent=LTnewLM_360011900.1 ### LTnewLM_36 . polypeptide 206763 207677 . + . ID=LTnewLM_360011900.1:pep;Derives_from=LTnewLM_360011900.1;orthologous_to=LmjF.36.0610_mRNA;ortholog_cluster=OG0006182;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_36 Pfam protein_match 207405 207596 . + . Parent=LTnewLM_360011900.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_36 . pseudogene 209353 210268 . + . ID=LTnewLM_360012000:pseudogene;coverage=0.977;sequence_ID=0.892;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.0620_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 209353 210268 . + . ID=LTnewLM_360012000.1;Parent=LTnewLM_360012000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 209709 210268 . + . ID=LTnewLM_360012000.1:pseudogenic_exon:1;Parent=LTnewLM_360012000.1;extra_copy_number=0 LTnewLM_36 . pseudogenic_transcript 209919 210268 . + . ID=LTnewLM_360012000.2;Parent=LTnewLM_360012000:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 210047 210268 . + . ID=LTnewLM_360012000.2:pseudogenic_exon:1;Parent=LTnewLM_360012000.2;extra_copy_number=0 ### LTnewLM_36 . polypeptide 209709 210268 . + . ID=LTnewLM_360012000.1:pep;Derives_from=LTnewLM_360012000.1;product=term%3Dhypothetical protein ### LTnewLM_36 . polypeptide 210047 210268 . + . ID=LTnewLM_360012000.2:pep;Derives_from=LTnewLM_360012000.2;orthologous_to=LmjF.36.0620.1_mRNA;ortholog_cluster=OG0007680;product=term%3DMitochondrial ATP synthase epsilon chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04627;Ontology_term=GO:0046961,GO:0046933,GO:0000275,GO:0015986 LTnewLM_36 Pfam protein_match 210077 210166 . + . Parent=LTnewLM_360012000.2:pep;Name=PF04627;signature_desc=Mitochondrial ATP synthase epsilon chain;Ontology_term=GO:0046933,GO:0046961,GO:0015986,GO:0000275 ### LTnewLM_36 AUGUSTUS gene 211945 212511 1 + . ID=LTnewLM_360012100 LTnewLM_36 AUGUSTUS mRNA 211945 212511 1 + . ID=LTnewLM_360012100.1;Parent=LTnewLM_360012100 LTnewLM_36 AUGUSTUS CDS 211945 212511 1 + 0 ID=LTnewLM_360012100.1:CDS:1;Parent=LTnewLM_360012100.1 ### LTnewLM_36 . polypeptide 211945 212511 . + . ID=LTnewLM_360012100.1:pep;Derives_from=LTnewLM_360012100.1;orthologous_to=LmjF.36.0630_mRNA;ortholog_cluster=OG0006183;product=term%3DProtein of unknown function (DUF3592)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12158 LTnewLM_36 Pfam protein_match 211951 212349 . + . Parent=LTnewLM_360012100.1:pep;Name=PF12158;signature_desc=Protein of unknown function (DUF3592) ### LTnewLM_36 AUGUSTUS gene 213391 214341 1 + . ID=LTnewLM_360012200 LTnewLM_36 AUGUSTUS mRNA 213391 214341 1 + . ID=LTnewLM_360012200.1;Parent=LTnewLM_360012200 LTnewLM_36 AUGUSTUS CDS 213391 214341 1 + 0 ID=LTnewLM_360012200.1:CDS:1;Parent=LTnewLM_360012200.1 ### LTnewLM_36 . polypeptide 213391 214341 . + . ID=LTnewLM_360012200.1:pep;Derives_from=LTnewLM_360012200.1;orthologous_to=LmjF.36.0640_mRNA;ortholog_cluster=OG0006184;product=term%3DRibonuclease HII%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01351 LTnewLM_36 Pfam protein_match 213529 214092 . + . Parent=LTnewLM_360012200.1:pep;Name=PF01351;signature_desc=Ribonuclease HII ### LTnewLM_36 AUGUSTUS gene 215703 217187 1 + . ID=LTnewLM_360012300 LTnewLM_36 AUGUSTUS mRNA 215703 217187 1 + . ID=LTnewLM_360012300.1;Parent=LTnewLM_360012300 LTnewLM_36 AUGUSTUS CDS 215703 217187 1 + 0 ID=LTnewLM_360012300.1:CDS:1;Parent=LTnewLM_360012300.1 ### LTnewLM_36 . polypeptide 215703 217187 . + . ID=LTnewLM_360012300.1:pep;Derives_from=LTnewLM_360012300.1;orthologous_to=LmjF.36.0650_mRNA;ortholog_cluster=OG0006185;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 221900 222505 1 + . ID=LTnewLM_360012400 LTnewLM_36 AUGUSTUS mRNA 221900 222505 1 + . ID=LTnewLM_360012400.1;Parent=LTnewLM_360012400 LTnewLM_36 AUGUSTUS CDS 221900 222505 1 + 0 ID=LTnewLM_360012400.1:CDS:1;Parent=LTnewLM_360012400.1 ### LTnewLM_36 . polypeptide 221900 222505 . + . ID=LTnewLM_360012400.1:pep;Derives_from=LTnewLM_360012400.1;orthologous_to=LmjF.36.0660_mRNA;ortholog_cluster=OG0006186;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 227219 228610 1 + . ID=LTnewLM_360012500 LTnewLM_36 AUGUSTUS mRNA 227219 228610 1 + . ID=LTnewLM_360012500.1;Parent=LTnewLM_360012500 LTnewLM_36 AUGUSTUS CDS 227219 228610 1 + 0 ID=LTnewLM_360012500.1:CDS:1;Parent=LTnewLM_360012500.1 ### LTnewLM_36 . polypeptide 227219 228610 . + . ID=LTnewLM_360012500.1:pep;Derives_from=LTnewLM_360012500.1;orthologous_to=LmjF.36.0670_mRNA;ortholog_cluster=OG0006187;product=term%3DUAA transporter family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08449;Ontology_term=GO:0055085 LTnewLM_36 Pfam protein_match 227618 227971 . + . Parent=LTnewLM_360012500.1:pep;Name=PF08449;signature_desc=UAA transporter family;Ontology_term=GO:0055085 ### LTnewLM_36 . pseudogene 230661 233761 . + . ID=LTnewLM_360012600:pseudogene;coverage=0.992;sequence_ID=0.906;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0680_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 230661 233761 . + . ID=LTnewLM_360012600.1;Parent=LTnewLM_360012600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 230661 233761 . + . ID=LTnewLM_360012600.1:pseudogenic_exon:1;Parent=LTnewLM_360012600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 230661 233761 . + . ID=LTnewLM_360012600.1:pep;Derives_from=LTnewLM_360012600.1;orthologous_to=LmjF.36.0680_mRNA;ortholog_cluster=OG0007681;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 234642 235448 1 + . ID=LTnewLM_360012700 LTnewLM_36 AUGUSTUS mRNA 234642 235448 1 + . ID=LTnewLM_360012700.1;Parent=LTnewLM_360012700 LTnewLM_36 AUGUSTUS CDS 234642 235448 1 + 0 ID=LTnewLM_360012700.1:CDS:1;Parent=LTnewLM_360012700.1 ### LTnewLM_36 . polypeptide 234642 235448 . + . ID=LTnewLM_360012700.1:pep;Derives_from=LTnewLM_360012700.1;orthologous_to=LmjF.36.0690_mRNA;ortholog_cluster=OG0006188;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 236212 236901 1 + . ID=LTnewLM_360012800 LTnewLM_36 AUGUSTUS mRNA 236212 236901 1 + . ID=LTnewLM_360012800.1;Parent=LTnewLM_360012800 LTnewLM_36 AUGUSTUS CDS 236212 236901 1 + 0 ID=LTnewLM_360012800.1:CDS:1;Parent=LTnewLM_360012800.1 ### LTnewLM_36 . polypeptide 236212 236901 . + . ID=LTnewLM_360012800.1:pep;Derives_from=LTnewLM_360012800.1;orthologous_to=LmjF.36.0700_mRNA;ortholog_cluster=OG0006189;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 239234 240013 1 + . ID=LTnewLM_360012900 LTnewLM_36 AUGUSTUS mRNA 239234 240013 1 + . ID=LTnewLM_360012900.1;Parent=LTnewLM_360012900 LTnewLM_36 AUGUSTUS CDS 239234 240013 1 + 0 ID=LTnewLM_360012900.1:CDS:1;Parent=LTnewLM_360012900.1 ### LTnewLM_36 . polypeptide 239234 240013 . + . ID=LTnewLM_360012900.1:pep;Derives_from=LTnewLM_360012900.1;orthologous_to=LmjF.36.0710_mRNA;ortholog_cluster=OG0006190;product=term%3DLeucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14580 LTnewLM_36 Pfam protein_match 239333 239674 . + . Parent=LTnewLM_360012900.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat ### LTnewLM_36 AUGUSTUS gene 242582 243877 1 + . ID=LTnewLM_360013000 LTnewLM_36 AUGUSTUS mRNA 242582 243877 1 + . ID=LTnewLM_360013000.1;Parent=LTnewLM_360013000 LTnewLM_36 AUGUSTUS CDS 242582 243877 1 + 0 ID=LTnewLM_360013000.1:CDS:1;Parent=LTnewLM_360013000.1 ### LTnewLM_36 . polypeptide 242582 243877 . + . ID=LTnewLM_360013000.1:pep;Derives_from=LTnewLM_360013000.1;orthologous_to=LmjF.36.0720_mRNA;ortholog_cluster=OG0006191;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 242618 243484 . + . Parent=LTnewLM_360013000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 242621 243379 . + . Parent=LTnewLM_360013000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 . polypeptide 247310 247752 . + . ID=LTnewLM_360013100.1:pep;Derives_from=LTnewLM_360013100.1;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.2;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 247310 247802 1.62 + . ID=LTnewLM_360013100 LTnewLM_36 AUGUSTUS mRNA 247310 247752 0.85 + . ID=LTnewLM_360013100.1;Parent=LTnewLM_360013100 LTnewLM_36 AUGUSTUS CDS 247310 247380 0.85 + 0 ID=LTnewLM_360013100.1:CDS:1;Parent=LTnewLM_360013100.1 LTnewLM_36 AUGUSTUS CDS 247530 247752 0.85 + 1 ID=LTnewLM_360013100.1:CDS:2;Parent=LTnewLM_360013100.1 LTnewLM_36 AUGUSTUS mRNA 247310 247802 0.77 + . ID=LTnewLM_360013100.2;Parent=LTnewLM_360013100 LTnewLM_36 AUGUSTUS CDS 247310 247380 0.95 + 0 ID=LTnewLM_360013100.2:CDS:1;Parent=LTnewLM_360013100.2 LTnewLM_36 AUGUSTUS CDS 247460 247802 0.77 + 1 ID=LTnewLM_360013100.2:CDS:2;Parent=LTnewLM_360013100.2 ### LTnewLM_36 . polypeptide 247310 247802 . + . ID=LTnewLM_360013100.2:pep;Derives_from=LTnewLM_360013100.2;orthologous_to=LTnewLM_120010300.1,LTnewLM_270011700.1,LTnewLM_300020400.1,LTnewLM_300020700.1,LTnewLM_300021000.1,LTnewLM_310021400.1,LTnewLM_340037200.1,LTnewLM_360013100.1;ortholog_cluster=OG0000017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 252868 254495 . + . ID=LTnewLM_360013200:pseudogene;coverage=0.977;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0730_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 252868 254495 . + . ID=LTnewLM_360013200.1;Parent=LTnewLM_360013200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 252868 254495 . + . ID=LTnewLM_360013200.1:pseudogenic_exon:1;Parent=LTnewLM_360013200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 252868 254495 . + . ID=LTnewLM_360013200.1:pep;Derives_from=LTnewLM_360013200.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 270932 272560 1 + . ID=LTnewLM_360013300 LTnewLM_36 AUGUSTUS mRNA 270932 272560 1 + . ID=LTnewLM_360013300.1;Parent=LTnewLM_360013300 LTnewLM_36 AUGUSTUS CDS 270932 272560 1 + 0 ID=LTnewLM_360013300.1:CDS:1;Parent=LTnewLM_360013300.1 ### LTnewLM_36 . polypeptide 270932 272560 . + . ID=LTnewLM_360013300.1:pep;Derives_from=LTnewLM_360013300.1;orthologous_to=LTnewLM_020006100.1,LmjF.36.0730_mRNA,LmjF.36.0740_mRNA;ortholog_cluster=OG0000144;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 289655 293527 1 + . ID=LTnewLM_360013400 LTnewLM_36 AUGUSTUS mRNA 289655 293527 1 + . ID=LTnewLM_360013400.1;Parent=LTnewLM_360013400 LTnewLM_36 AUGUSTUS CDS 289655 293527 1 + 0 ID=LTnewLM_360013400.1:CDS:1;Parent=LTnewLM_360013400.1 ### LTnewLM_36 . polypeptide 289655 293527 . + . ID=LTnewLM_360013400.1:pep;Derives_from=LTnewLM_360013400.1;orthologous_to=LmjF.36.0750_mRNA;ortholog_cluster=OG0006192;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 296559 300110 0.89 + . ID=LTnewLM_360013500 LTnewLM_36 AUGUSTUS mRNA 296559 300110 0.89 + . ID=LTnewLM_360013500.1;Parent=LTnewLM_360013500 LTnewLM_36 AUGUSTUS CDS 296559 300110 0.89 + 0 ID=LTnewLM_360013500.1:CDS:1;Parent=LTnewLM_360013500.1 ### LTnewLM_36 . polypeptide 296559 300110 . + . ID=LTnewLM_360013500.1:pep;Derives_from=LTnewLM_360013500.1;orthologous_to=LmjF.36.0760_mRNA;ortholog_cluster=OG0006193;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_36 Pfam protein_match 299955 300086 . + . Parent=LTnewLM_360013500.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_36 AUGUSTUS gene 301781 303097 1 + . ID=LTnewLM_360013600 LTnewLM_36 AUGUSTUS mRNA 301781 303097 1 + . ID=LTnewLM_360013600.1;Parent=LTnewLM_360013600 LTnewLM_36 AUGUSTUS CDS 301781 303097 1 + 0 ID=LTnewLM_360013600.1:CDS:1;Parent=LTnewLM_360013600.1 ### LTnewLM_36 . polypeptide 301781 303097 . + . ID=LTnewLM_360013600.1:pep;Derives_from=LTnewLM_360013600.1;orthologous_to=LmjF.36.0770_mRNA;ortholog_cluster=OG0006194;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 304886 308248 1 + . ID=LTnewLM_360013700 LTnewLM_36 AUGUSTUS mRNA 304886 308248 1 + . ID=LTnewLM_360013700.1;Parent=LTnewLM_360013700 LTnewLM_36 AUGUSTUS CDS 304886 308248 1 + 0 ID=LTnewLM_360013700.1:CDS:1;Parent=LTnewLM_360013700.1 ### LTnewLM_36 . polypeptide 304886 308248 . + . ID=LTnewLM_360013700.1:pep;Derives_from=LTnewLM_360013700.1;orthologous_to=LmjF.36.0780_mRNA;ortholog_cluster=OG0006195;product=term%3DCalpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_36 Pfam protein_match 306212 307015 . + . Parent=LTnewLM_360013700.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 ### LTnewLM_36 AUGUSTUS gene 309350 309559 1 + . ID=LTnewLM_360013800 LTnewLM_36 AUGUSTUS mRNA 309350 309559 1 + . ID=LTnewLM_360013800.1;Parent=LTnewLM_360013800 LTnewLM_36 AUGUSTUS CDS 309350 309559 1 + 0 ID=LTnewLM_360013800.1:CDS:1;Parent=LTnewLM_360013800.1 ### LTnewLM_36 . polypeptide 309350 309559 . + . ID=LTnewLM_360013800.1:pep;Derives_from=LTnewLM_360013800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 311241 312926 1 + . ID=LTnewLM_360013900 LTnewLM_36 AUGUSTUS mRNA 311241 312926 1 + . ID=LTnewLM_360013900.1;Parent=LTnewLM_360013900 LTnewLM_36 AUGUSTUS CDS 311241 312926 1 + 0 ID=LTnewLM_360013900.1:CDS:1;Parent=LTnewLM_360013900.1 ### LTnewLM_36 . polypeptide 311241 312926 . + . ID=LTnewLM_360013900.1:pep;Derives_from=LTnewLM_360013900.1;orthologous_to=LmjF.36.0790_mRNA;ortholog_cluster=OG0006196;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 313771 315444 1 + . ID=LTnewLM_360014000 LTnewLM_36 AUGUSTUS mRNA 313771 315444 1 + . ID=LTnewLM_360014000.1;Parent=LTnewLM_360014000 LTnewLM_36 AUGUSTUS CDS 313771 315444 1 + 0 ID=LTnewLM_360014000.1:CDS:1;Parent=LTnewLM_360014000.1 ### LTnewLM_36 . polypeptide 313771 315444 . + . ID=LTnewLM_360014000.1:pep;Derives_from=LTnewLM_360014000.1;orthologous_to=LmjF.36.0800_mRNA;ortholog_cluster=OG0006197;product=term%3DTranscription factor Tfb2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03849;Ontology_term=GO:0006289,GO:0005634,GO:0000439,GO:0004003 LTnewLM_36 Pfam protein_match 314326 315042 . + . Parent=LTnewLM_360014000.1:pep;Name=PF03849;signature_desc=Transcription factor Tfb2;Ontology_term=GO:0004003,GO:0006289,GO:0000439,GO:0005634 ### LTnewLM_36 AUGUSTUS gene 316287 317666 1 + . ID=LTnewLM_360014100 LTnewLM_36 AUGUSTUS mRNA 316287 317666 1 + . ID=LTnewLM_360014100.1;Parent=LTnewLM_360014100 LTnewLM_36 AUGUSTUS CDS 316287 317666 1 + 0 ID=LTnewLM_360014100.1:CDS:1;Parent=LTnewLM_360014100.1 ### LTnewLM_36 . polypeptide 316287 317666 . + . ID=LTnewLM_360014100.1:pep;Derives_from=LTnewLM_360014100.1;orthologous_to=LmjF.36.0810_mRNA;ortholog_cluster=OG0006198;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 318688 319593 1 + . ID=LTnewLM_360014200 LTnewLM_36 AUGUSTUS mRNA 318688 319593 1 + . ID=LTnewLM_360014200.1;Parent=LTnewLM_360014200 LTnewLM_36 AUGUSTUS CDS 318688 319593 1 + 0 ID=LTnewLM_360014200.1:CDS:1;Parent=LTnewLM_360014200.1 ### LTnewLM_36 . polypeptide 318688 319593 . + . ID=LTnewLM_360014200.1:pep;Derives_from=LTnewLM_360014200.1;orthologous_to=LmjF.36.0820_mRNA;ortholog_cluster=OG0006199;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_36 Pfam protein_match 318955 319470 . + . Parent=LTnewLM_360014200.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 318997 319320 . + . Parent=LTnewLM_360014200.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_36 Pfam protein_match 319000 319341 . + . Parent=LTnewLM_360014200.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_36 AUGUSTUS gene 322329 328139 1 + . ID=LTnewLM_360014300 LTnewLM_36 AUGUSTUS mRNA 322329 328139 1 + . ID=LTnewLM_360014300.1;Parent=LTnewLM_360014300 LTnewLM_36 AUGUSTUS CDS 322329 328139 1 + 0 ID=LTnewLM_360014300.1:CDS:1;Parent=LTnewLM_360014300.1 ### LTnewLM_36 . polypeptide 322329 328139 . + . ID=LTnewLM_360014300.1:pep;Derives_from=LTnewLM_360014300.1;orthologous_to=LmjF.36.0830_mRNA;ortholog_cluster=OG0006200;product=term%3DCyclic nucleotide-binding domain/C2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00027|Pfam:PF00168;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 323361 323591 . + . Parent=LTnewLM_360014300.1:pep;Name=PF00027;signature_desc=Cyclic nucleotide-binding domain LTnewLM_36 Pfam protein_match 325542 325757 . + . Parent=LTnewLM_360014300.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 332245 334605 1 + . ID=LTnewLM_360014400 LTnewLM_36 AUGUSTUS mRNA 332245 334605 1 + . ID=LTnewLM_360014400.1;Parent=LTnewLM_360014400 LTnewLM_36 AUGUSTUS CDS 332245 334605 1 + 0 ID=LTnewLM_360014400.1:CDS:1;Parent=LTnewLM_360014400.1 ### LTnewLM_36 . polypeptide 332245 334605 . + . ID=LTnewLM_360014400.1:pep;Derives_from=LTnewLM_360014400.1;orthologous_to=LmjF.36.0840_mRNA;ortholog_cluster=OG0006201;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 340613 343279 1 + . ID=LTnewLM_360014500 LTnewLM_36 AUGUSTUS mRNA 340613 343279 1 + . ID=LTnewLM_360014500.1;Parent=LTnewLM_360014500 LTnewLM_36 AUGUSTUS CDS 340613 343279 1 + 0 ID=LTnewLM_360014500.1:CDS:1;Parent=LTnewLM_360014500.1 ### LTnewLM_36 . polypeptide 340613 343279 . + . ID=LTnewLM_360014500.1:pep;Derives_from=LTnewLM_360014500.1;orthologous_to=LmjF.36.0850_mRNA;ortholog_cluster=OG0006202;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 345349 346926 1 + . ID=LTnewLM_360014600 LTnewLM_36 AUGUSTUS mRNA 345349 346926 1 + . ID=LTnewLM_360014600.1;Parent=LTnewLM_360014600 LTnewLM_36 AUGUSTUS CDS 345349 346926 1 + 0 ID=LTnewLM_360014600.1:CDS:1;Parent=LTnewLM_360014600.1 ### LTnewLM_36 . polypeptide 345349 346926 . + . ID=LTnewLM_360014600.1:pep;Derives_from=LTnewLM_360014600.1;orthologous_to=LmjF.36.0860_mRNA;ortholog_cluster=OG0006203;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 345535 346296 . + . Parent=LTnewLM_360014600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 345541 346284 . + . Parent=LTnewLM_360014600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 350170 353004 1 + . ID=LTnewLM_360014700 LTnewLM_36 AUGUSTUS mRNA 350170 353004 1 + . ID=LTnewLM_360014700.1;Parent=LTnewLM_360014700 LTnewLM_36 AUGUSTUS CDS 350170 353004 1 + 0 ID=LTnewLM_360014700.1:CDS:1;Parent=LTnewLM_360014700.1 ### LTnewLM_36 . polypeptide 350170 353004 . + . ID=LTnewLM_360014700.1:pep;Derives_from=LTnewLM_360014700.1;orthologous_to=LmjF.36.0870_mRNA;ortholog_cluster=OG0006204;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 350767 351342 . + . Parent=LTnewLM_360014700.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 351493 351855 . + . Parent=LTnewLM_360014700.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 352045 352260 . + . Parent=LTnewLM_360014700.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 ### LTnewLM_36 AUGUSTUS gene 353657 354439 1 + . ID=LTnewLM_360014800 LTnewLM_36 AUGUSTUS mRNA 353657 354439 1 + . ID=LTnewLM_360014800.1;Parent=LTnewLM_360014800 LTnewLM_36 AUGUSTUS CDS 353657 354439 1 + 0 ID=LTnewLM_360014800.1:CDS:1;Parent=LTnewLM_360014800.1 ### LTnewLM_36 . polypeptide 353657 354439 . + . ID=LTnewLM_360014800.1:pep;Derives_from=LTnewLM_360014800.1;orthologous_to=LmjF.36.0880_mRNA;ortholog_cluster=OG0006205;product=term%3DScaffold protein Nfu/NifU N terminal/NifU-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08712|Pfam:PF01106;Ontology_term=GO:0005506,GO:0051536,GO:0016226 LTnewLM_36 Pfam protein_match 353696 353962 . + . Parent=LTnewLM_360014800.1:pep;Name=PF08712;signature_desc=Scaffold protein Nfu/NifU N terminal LTnewLM_36 Pfam protein_match 354062 354265 . + . Parent=LTnewLM_360014800.1:pep;Name=PF01106;signature_desc=NifU-like domain;Ontology_term=GO:0005506,GO:0051536,GO:0016226 ### LTnewLM_36 AUGUSTUS gene 355597 356346 1 + . ID=LTnewLM_360014900 LTnewLM_36 AUGUSTUS mRNA 355597 356346 1 + . ID=LTnewLM_360014900.1;Parent=LTnewLM_360014900 LTnewLM_36 AUGUSTUS CDS 355597 356346 1 + 0 ID=LTnewLM_360014900.1:CDS:1;Parent=LTnewLM_360014900.1 ### LTnewLM_36 . polypeptide 355597 356346 . + . ID=LTnewLM_360014900.1:pep;Derives_from=LTnewLM_360014900.1;orthologous_to=LmjF.36.0890_mRNA;ortholog_cluster=OG0006206;product=term%3DeIF-6 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01912;Ontology_term=GO:0042256,GO:0043022 LTnewLM_36 Pfam protein_match 355606 356202 . + . Parent=LTnewLM_360014900.1:pep;Name=PF01912;signature_desc=eIF-6 family;Ontology_term=GO:0043022,GO:0042256 ### LTnewLM_36 . pseudogene 359984 362776 . + . ID=LTnewLM_360015000:pseudogene;coverage=0.993;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0900_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 359984 362776 . + . ID=LTnewLM_360015000.1;Parent=LTnewLM_360015000:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 359984 362776 . + . ID=LTnewLM_360015000.1:pseudogenic_exon:1;Parent=LTnewLM_360015000.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 359984 362776 . + . ID=LTnewLM_360015000.1:pep;Derives_from=LTnewLM_360015000.1;orthologous_to=LmjF.36.0900_mRNA;ortholog_cluster=OG0007682;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 360464 361225 . + . Parent=LTnewLM_360015000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 360470 361213 . + . Parent=LTnewLM_360015000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 365452 365915 0.48 + . ID=LTnewLM_360015100 LTnewLM_36 AUGUSTUS mRNA 365452 365915 0.48 + . ID=LTnewLM_360015100.1;Parent=LTnewLM_360015100 LTnewLM_36 AUGUSTUS CDS 365452 365571 0.49 + 0 ID=LTnewLM_360015100.1:CDS:1;Parent=LTnewLM_360015100.1 LTnewLM_36 AUGUSTUS CDS 365736 365915 0.72 + 0 ID=LTnewLM_360015100.1:CDS:2;Parent=LTnewLM_360015100.1 ### LTnewLM_36 . polypeptide 365452 365915 . + . ID=LTnewLM_360015100.1:pep;Derives_from=LTnewLM_360015100.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 371959 376650 1 + . ID=LTnewLM_360015200 LTnewLM_36 AUGUSTUS mRNA 371959 376650 1 + . ID=LTnewLM_360015200.1;Parent=LTnewLM_360015200 LTnewLM_36 AUGUSTUS CDS 371959 376650 1 + 0 ID=LTnewLM_360015200.1:CDS:1;Parent=LTnewLM_360015200.1 ### LTnewLM_36 . polypeptide 371959 376650 . + . ID=LTnewLM_360015200.1:pep;Derives_from=LTnewLM_360015200.1;orthologous_to=LmjF.36.0910_mRNA;ortholog_cluster=OG0006207;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 375874 376632 . + . Parent=LTnewLM_360015200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 375874 376638 . + . Parent=LTnewLM_360015200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 Liftoff gene 379331 381226 . + . ID=LTnewLM_360015300;coverage=1.0;sequence_ID=0.943;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.0920_0 LTnewLM_36 Liftoff mRNA 379331 381226 . + . ID=LTnewLM_360015300.1;Parent=LTnewLM_360015300;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 379331 381226 . + 0 ID=LTnewLM_360015300.1:CDS:1;Parent=LTnewLM_360015300.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 379331 381226 . + . ID=LTnewLM_360015300.1:pep;Derives_from=LTnewLM_360015300.1;orthologous_to=LmjF.36.0920_mRNA;ortholog_cluster=OG0006208;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 382545 382943 1 + . ID=LTnewLM_360015400 LTnewLM_36 AUGUSTUS mRNA 382545 382943 1 + . ID=LTnewLM_360015400.1;Parent=LTnewLM_360015400 LTnewLM_36 AUGUSTUS CDS 382545 382943 1 + 0 ID=LTnewLM_360015400.1:CDS:1;Parent=LTnewLM_360015400.1 ### LTnewLM_36 . polypeptide 382545 382943 . + . ID=LTnewLM_360015400.1:pep;Derives_from=LTnewLM_360015400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 386296 386796 1 + . ID=LTnewLM_360015500 LTnewLM_36 AUGUSTUS mRNA 386296 386796 1 + . ID=LTnewLM_360015500.1;Parent=LTnewLM_360015500 LTnewLM_36 AUGUSTUS CDS 386296 386796 1 + 0 ID=LTnewLM_360015500.1:CDS:1;Parent=LTnewLM_360015500.1 ### LTnewLM_36 . polypeptide 386296 386796 . + . ID=LTnewLM_360015500.1:pep;Derives_from=LTnewLM_360015500.1;orthologous_to=LTnewLM_360015600.1,LmjF.36.0930_mRNA,LmjF.36.0940_mRNA;ortholog_cluster=OG0000254;product=term%3DRibosomal protein S13/S18%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00416;Ontology_term=GO:0003723,GO:0003735,GO:0005622,GO:0005840,GO:0006412 LTnewLM_36 Pfam protein_match 386377 386757 . + . Parent=LTnewLM_360015500.1:pep;Name=PF00416;signature_desc=Ribosomal protein S13/S18;Ontology_term=GO:0003723,GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 387787 388248 1 + . ID=LTnewLM_360015600 LTnewLM_36 AUGUSTUS mRNA 387787 388248 1 + . ID=LTnewLM_360015600.1;Parent=LTnewLM_360015600 LTnewLM_36 AUGUSTUS CDS 387787 388248 1 + 0 ID=LTnewLM_360015600.1:CDS:1;Parent=LTnewLM_360015600.1 ### LTnewLM_36 . polypeptide 387787 388248 . + . ID=LTnewLM_360015600.1:pep;Derives_from=LTnewLM_360015600.1;orthologous_to=LTnewLM_360015500.1,LmjF.36.0930_mRNA,LmjF.36.0940_mRNA;ortholog_cluster=OG0000254;product=term%3DRibosomal protein S13/S18%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00416;Ontology_term=GO:0003723,GO:0003735,GO:0005622,GO:0005840,GO:0006412 LTnewLM_36 Pfam protein_match 387829 388209 . + . Parent=LTnewLM_360015600.1:pep;Name=PF00416;signature_desc=Ribosomal protein S13/S18;Ontology_term=GO:0003723,GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 Liftoff gene 389717 402538 . + . ID=LTnewLM_360015700;coverage=0.999;sequence_ID=0.955;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.0950_0 LTnewLM_36 Liftoff mRNA 389717 402538 . + . ID=LTnewLM_360015700.1;Parent=LTnewLM_360015700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 389717 402538 . + 0 ID=LTnewLM_360015700.1:CDS:1;Parent=LTnewLM_360015700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 389717 402538 . + . ID=LTnewLM_360015700.1:pep;Derives_from=LTnewLM_360015700.1;orthologous_to=LmjF.36.0950_mRNA;ortholog_cluster=OG0006209;product=term%3DDynein heavy chain%2C N-terminal region 2/Hydrolytic ATP binding site of dynein motor region/Dynein heavy chain AAA lid domain/P-loop containing dynein motor region/AAA+ lid domain/P-loop containing dynein motor region D4/Microtubule-binding stalk of dynein motor/ATP-binding dynein motor region/Dynein heavy chain region D6 P-loop domain/Dynein heavy chain C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393|Pfam:PF12774|Pfam:PF17852|Pfam:PF12775|Pfam:PF17857|Pfam:PF12780|Pfam:PF12777|Pfam:PF12781|Pfam:PF03028|Pfam:PF18198|Pfam:PF18199;Ontology_term=GO:0030286,GO:0007018,GO:0003777 LTnewLM_36 Pfam protein_match 392738 393952 . + . Parent=LTnewLM_360015700.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 LTnewLM_36 Pfam protein_match 394340 395317 . + . Parent=LTnewLM_360015700.1:pep;Name=PF12774;signature_desc=Hydrolytic ATP binding site of dynein motor region LTnewLM_36 Pfam protein_match 395822 396208 . + . Parent=LTnewLM_360015700.1:pep;Name=PF17852;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_36 Pfam protein_match 396242 396772 . + . Parent=LTnewLM_360015700.1:pep;Name=PF12775;signature_desc=P-loop containing dynein motor region LTnewLM_36 Pfam protein_match 396908 397132 . + . Parent=LTnewLM_360015700.1:pep;Name=PF17857;signature_desc=AAA+ lid domain LTnewLM_36 Pfam protein_match 397373 398155 . + . Parent=LTnewLM_360015700.1:pep;Name=PF12780;signature_desc=P-loop containing dynein motor region D4 LTnewLM_36 Pfam protein_match 398198 399229 . + . Parent=LTnewLM_360015700.1:pep;Name=PF12777;signature_desc=Microtubule-binding stalk of dynein motor LTnewLM_36 Pfam protein_match 399317 399976 . + . Parent=LTnewLM_360015700.1:pep;Name=PF12781;signature_desc=ATP-binding dynein motor region LTnewLM_36 Pfam protein_match 400718 401050 . + . Parent=LTnewLM_360015700.1:pep;Name=PF03028;signature_desc=Dynein heavy chain region D6 P-loop domain;Ontology_term=GO:0003777,GO:0007018,GO:0030286 LTnewLM_36 Pfam protein_match 401150 401563 . + . Parent=LTnewLM_360015700.1:pep;Name=PF18198;signature_desc=Dynein heavy chain AAA lid domain LTnewLM_36 Pfam protein_match 401594 402520 . + . Parent=LTnewLM_360015700.1:pep;Name=PF18199;signature_desc=Dynein heavy chain C-terminal domain ### LTnewLM_36 AUGUSTUS gene 405952 408699 1 + . ID=LTnewLM_360015800 LTnewLM_36 AUGUSTUS mRNA 405952 408699 1 + . ID=LTnewLM_360015800.1;Parent=LTnewLM_360015800 LTnewLM_36 AUGUSTUS CDS 405952 408699 1 + 0 ID=LTnewLM_360015800.1:CDS:1;Parent=LTnewLM_360015800.1 ### LTnewLM_36 . polypeptide 405952 408699 . + . ID=LTnewLM_360015800.1:pep;Derives_from=LTnewLM_360015800.1;orthologous_to=LmjF.36.0960_mRNA;ortholog_cluster=OG0006210;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 412077 412763 1 + . ID=LTnewLM_360015900 LTnewLM_36 AUGUSTUS mRNA 412077 412763 1 + . ID=LTnewLM_360015900.1;Parent=LTnewLM_360015900 LTnewLM_36 AUGUSTUS CDS 412077 412763 1 + 0 ID=LTnewLM_360015900.1:CDS:1;Parent=LTnewLM_360015900.1 ### LTnewLM_36 . polypeptide 412077 412763 . + . ID=LTnewLM_360015900.1:pep;Derives_from=LTnewLM_360015900.1;orthologous_to=LmjF.36.0970_mRNA;ortholog_cluster=OG0006211;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 413658 414257 1 + . ID=LTnewLM_360016000 LTnewLM_36 AUGUSTUS mRNA 413658 414257 1 + . ID=LTnewLM_360016000.1;Parent=LTnewLM_360016000 LTnewLM_36 AUGUSTUS CDS 413658 414257 1 + 0 ID=LTnewLM_360016000.1:CDS:1;Parent=LTnewLM_360016000.1 ### LTnewLM_36 . polypeptide 413658 414257 . + . ID=LTnewLM_360016000.1:pep;Derives_from=LTnewLM_360016000.1;orthologous_to=LTnewLM_360016100.1,LmjF.36.0980_mRNA,LmjF.36.0990_mRNA;ortholog_cluster=OG0000255;product=term%3DPlectin/S10 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03501 LTnewLM_36 Pfam protein_match 413763 414047 . + . Parent=LTnewLM_360016000.1:pep;Name=PF03501;signature_desc=Plectin/S10 domain ### LTnewLM_36 AUGUSTUS gene 414921 415427 1 + . ID=LTnewLM_360016100 LTnewLM_36 AUGUSTUS mRNA 414921 415427 1 + . ID=LTnewLM_360016100.1;Parent=LTnewLM_360016100 LTnewLM_36 AUGUSTUS CDS 414921 415427 1 + 0 ID=LTnewLM_360016100.1:CDS:1;Parent=LTnewLM_360016100.1 ### LTnewLM_36 . polypeptide 414921 415427 . + . ID=LTnewLM_360016100.1:pep;Derives_from=LTnewLM_360016100.1;orthologous_to=LTnewLM_360016000.1,LmjF.36.0980_mRNA,LmjF.36.0990_mRNA;ortholog_cluster=OG0000255;product=term%3DPlectin/S10 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03501 LTnewLM_36 Pfam protein_match 414933 415217 . + . Parent=LTnewLM_360016100.1:pep;Name=PF03501;signature_desc=Plectin/S10 domain ### LTnewLM_36 AUGUSTUS gene 416346 420236 1 + . ID=LTnewLM_360016200 LTnewLM_36 AUGUSTUS mRNA 416346 420236 1 + . ID=LTnewLM_360016200.1;Parent=LTnewLM_360016200 LTnewLM_36 AUGUSTUS CDS 416346 420236 1 + 0 ID=LTnewLM_360016200.1:CDS:1;Parent=LTnewLM_360016200.1 ### LTnewLM_36 . polypeptide 416346 420236 . + . ID=LTnewLM_360016200.1:pep;Derives_from=LTnewLM_360016200.1;orthologous_to=LmjF.36.1000_mRNA;ortholog_cluster=OG0006212;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 416493 416603 . + . Parent=LTnewLM_360016200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 421465 426399 1 + . ID=LTnewLM_360016300 LTnewLM_36 AUGUSTUS mRNA 421465 426399 1 + . ID=LTnewLM_360016300.1;Parent=LTnewLM_360016300 LTnewLM_36 AUGUSTUS CDS 421465 426399 1 + 0 ID=LTnewLM_360016300.1:CDS:1;Parent=LTnewLM_360016300.1 ### LTnewLM_36 . polypeptide 421465 426399 . + . ID=LTnewLM_360016300.1:pep;Derives_from=LTnewLM_360016300.1;orthologous_to=LmjF.36.1010_mRNA;ortholog_cluster=OG0006213;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 427429 429069 1 + . ID=LTnewLM_360016400 LTnewLM_36 AUGUSTUS mRNA 427429 429069 1 + . ID=LTnewLM_360016400.1;Parent=LTnewLM_360016400 LTnewLM_36 AUGUSTUS CDS 427429 429069 1 + 0 ID=LTnewLM_360016400.1:CDS:1;Parent=LTnewLM_360016400.1 ### LTnewLM_36 . polypeptide 427429 429069 . + . ID=LTnewLM_360016400.1:pep;Derives_from=LTnewLM_360016400.1;orthologous_to=LmjF.36.1020_mRNA;ortholog_cluster=OG0006214;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 430493 435511 1 + . ID=LTnewLM_360016500 LTnewLM_36 AUGUSTUS mRNA 430493 435511 1 + . ID=LTnewLM_360016500.1;Parent=LTnewLM_360016500 LTnewLM_36 AUGUSTUS CDS 430493 435511 1 + 0 ID=LTnewLM_360016500.1:CDS:1;Parent=LTnewLM_360016500.1 ### LTnewLM_36 . polypeptide 430493 435511 . + . ID=LTnewLM_360016500.1:pep;Derives_from=LTnewLM_360016500.1;orthologous_to=LmjF.36.1030_mRNA;ortholog_cluster=OG0006215;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 436923 437783 1 + . ID=LTnewLM_360016600 LTnewLM_36 AUGUSTUS mRNA 436923 437783 1 + . ID=LTnewLM_360016600.1;Parent=LTnewLM_360016600 LTnewLM_36 AUGUSTUS CDS 436923 437783 1 + 0 ID=LTnewLM_360016600.1:CDS:1;Parent=LTnewLM_360016600.1 ### LTnewLM_36 . polypeptide 436923 437783 . + . ID=LTnewLM_360016600.1:pep;Derives_from=LTnewLM_360016600.1;orthologous_to=LmjF.36.1040_mRNA;ortholog_cluster=OG0006216;product=term%3DFlagellar C1a complex subunit C1a-32%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14769 LTnewLM_36 Pfam protein_match 437109 437384 . + . Parent=LTnewLM_360016600.1:pep;Name=PF14769;signature_desc=Flagellar C1a complex subunit C1a-32 ### LTnewLM_36 AUGUSTUS gene 438961 440724 1 + . ID=LTnewLM_360016700 LTnewLM_36 AUGUSTUS mRNA 438961 440724 1 + . ID=LTnewLM_360016700.1;Parent=LTnewLM_360016700 LTnewLM_36 AUGUSTUS CDS 438961 440724 1 + 0 ID=LTnewLM_360016700.1:CDS:1;Parent=LTnewLM_360016700.1 ### LTnewLM_36 . polypeptide 438961 440724 . + . ID=LTnewLM_360016700.1:pep;Derives_from=LTnewLM_360016700.1;orthologous_to=LmjF.36.1050_mRNA;ortholog_cluster=OG0006217;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 442066 445083 1 + . ID=LTnewLM_360016800 LTnewLM_36 AUGUSTUS mRNA 442066 445083 1 + . ID=LTnewLM_360016800.1;Parent=LTnewLM_360016800 LTnewLM_36 AUGUSTUS CDS 442066 445083 1 + 0 ID=LTnewLM_360016800.1:CDS:1;Parent=LTnewLM_360016800.1 ### LTnewLM_36 . polypeptide 442066 445083 . + . ID=LTnewLM_360016800.1:pep;Derives_from=LTnewLM_360016800.1;orthologous_to=LmjF.36.1060_mRNA;ortholog_cluster=OG0006218;product=term%3DWilliams-Beuren syndrome DDT (WSD)%2C D-TOX E motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15613 LTnewLM_36 Pfam protein_match 444598 444969 . + . Parent=LTnewLM_360016800.1:pep;Name=PF15613;signature_desc=Williams-Beuren syndrome DDT (WSD)%2C D-TOX E motif ### LTnewLM_36 AUGUSTUS gene 445586 445960 1 + . ID=LTnewLM_360016900 LTnewLM_36 AUGUSTUS mRNA 445586 445960 1 + . ID=LTnewLM_360016900.1;Parent=LTnewLM_360016900 LTnewLM_36 AUGUSTUS CDS 445586 445960 1 + 0 ID=LTnewLM_360016900.1:CDS:1;Parent=LTnewLM_360016900.1 ### LTnewLM_36 . polypeptide 445586 445960 . + . ID=LTnewLM_360016900.1:pep;Derives_from=LTnewLM_360016900.1;orthologous_to=LTnewLM_360017200.1,LmjF.36.1070_mRNA,LmjF.36.1100_mRNA;ortholog_cluster=OG0000256;product=term%3DRibosomal protein L24e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01246 LTnewLM_36 Pfam protein_match 445586 445789 . + . Parent=LTnewLM_360016900.1:pep;Name=PF01246;signature_desc=Ribosomal protein L24e ### LTnewLM_36 AUGUSTUS gene 446725 448461 1 + . ID=LTnewLM_360017000 LTnewLM_36 AUGUSTUS mRNA 446725 448461 1 + . ID=LTnewLM_360017000.1;Parent=LTnewLM_360017000 LTnewLM_36 AUGUSTUS CDS 446725 448461 1 + 0 ID=LTnewLM_360017000.1:CDS:1;Parent=LTnewLM_360017000.1 ### LTnewLM_36 . polypeptide 446725 448461 . + . ID=LTnewLM_360017000.1:pep;Derives_from=LTnewLM_360017000.1;orthologous_to=LmjF.36.1080_mRNA;ortholog_cluster=OG0006219;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 449872 450333 1 + . ID=LTnewLM_360017100 LTnewLM_36 AUGUSTUS mRNA 449872 450333 1 + . ID=LTnewLM_360017100.1;Parent=LTnewLM_360017100 LTnewLM_36 AUGUSTUS CDS 449872 450333 1 + 0 ID=LTnewLM_360017100.1:CDS:1;Parent=LTnewLM_360017100.1 ### LTnewLM_36 . polypeptide 449872 450333 . + . ID=LTnewLM_360017100.1:pep;Derives_from=LTnewLM_360017100.1;orthologous_to=LmjF.36.1090_mRNA;ortholog_cluster=OG0006220;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 451218 451592 1 + . ID=LTnewLM_360017200 LTnewLM_36 AUGUSTUS mRNA 451218 451592 1 + . ID=LTnewLM_360017200.1;Parent=LTnewLM_360017200 LTnewLM_36 AUGUSTUS CDS 451218 451592 1 + 0 ID=LTnewLM_360017200.1:CDS:1;Parent=LTnewLM_360017200.1 ### LTnewLM_36 . polypeptide 451218 451592 . + . ID=LTnewLM_360017200.1:pep;Derives_from=LTnewLM_360017200.1;orthologous_to=LTnewLM_360016900.1,LmjF.36.1070_mRNA,LmjF.36.1100_mRNA;ortholog_cluster=OG0000256;product=term%3DRibosomal protein L24e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01246 LTnewLM_36 Pfam protein_match 451218 451421 . + . Parent=LTnewLM_360017200.1:pep;Name=PF01246;signature_desc=Ribosomal protein L24e ### LTnewLM_36 . pseudogene 452274 453935 . + . ID=LTnewLM_360017300:pseudogene;coverage=1.0;sequence_ID=0.930;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1110_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 452274 453935 . + . ID=LTnewLM_360017300.1;Parent=LTnewLM_360017300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 452274 453935 . + . ID=LTnewLM_360017300.1:pseudogenic_exon:1;Parent=LTnewLM_360017300.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 452274 453935 . + . ID=LTnewLM_360017300.1:pep;Derives_from=LTnewLM_360017300.1;orthologous_to=LmjF.36.1110_mRNA;ortholog_cluster=OG0007683;product=term%3DHORMA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02301 LTnewLM_36 Pfam protein_match 452310 452960 . + . Parent=LTnewLM_360017300.1:pep;Name=PF02301;signature_desc=HORMA domain ### LTnewLM_36 AUGUSTUS gene 455329 456408 1 + . ID=LTnewLM_360017400 LTnewLM_36 AUGUSTUS mRNA 455329 456408 1 + . ID=LTnewLM_360017400.1;Parent=LTnewLM_360017400 LTnewLM_36 AUGUSTUS CDS 455329 456408 1 + 0 ID=LTnewLM_360017400.1:CDS:1;Parent=LTnewLM_360017400.1 ### LTnewLM_36 . polypeptide 455329 456408 . + . ID=LTnewLM_360017400.1:pep;Derives_from=LTnewLM_360017400.1;orthologous_to=LmjF.36.1120_mRNA;ortholog_cluster=OG0006221;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 457320 458942 . + . ID=LTnewLM_360017500:pseudogene;coverage=0.999;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1130_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 457320 458942 . + . ID=LTnewLM_360017500.1;Parent=LTnewLM_360017500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 457320 458942 . + . ID=LTnewLM_360017500.1:pseudogenic_exon:1;Parent=LTnewLM_360017500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 457320 458942 . + . ID=LTnewLM_360017500.1:pep;Derives_from=LTnewLM_360017500.1;orthologous_to=LmjF.36.1130_mRNA;ortholog_cluster=OG0007684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 460062 460979 1 + . ID=LTnewLM_360017600 LTnewLM_36 AUGUSTUS mRNA 460062 460979 1 + . ID=LTnewLM_360017600.1;Parent=LTnewLM_360017600 LTnewLM_36 AUGUSTUS CDS 460062 460979 1 + 0 ID=LTnewLM_360017600.1:CDS:1;Parent=LTnewLM_360017600.1 ### LTnewLM_36 . polypeptide 460062 460979 . + . ID=LTnewLM_360017600.1:pep;Derives_from=LTnewLM_360017600.1;orthologous_to=LmjF.36.1140_mRNA;ortholog_cluster=OG0006222;product=term%3D3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain/3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02737|Pfam:PF00725;Ontology_term=GO:0055114,GO:0003857,GO:0016491,GO:0006631 LTnewLM_36 Pfam protein_match 460098 460649 . + . Parent=LTnewLM_360017600.1:pep;Name=PF02737;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 LTnewLM_36 Pfam protein_match 460656 460946 . + . Parent=LTnewLM_360017600.1:pep;Name=PF00725;signature_desc=3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0003857,GO:0016491,GO:0006631,GO:0055114 ### LTnewLM_36 . pseudogene 462492 465490 . + . ID=LTnewLM_360017700:pseudogene;coverage=0.976;sequence_ID=0.885;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1150_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 462492 465490 . + . ID=LTnewLM_360017700.1;Parent=LTnewLM_360017700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 462492 465490 . + . ID=LTnewLM_360017700.1:pseudogenic_exon:1;Parent=LTnewLM_360017700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 462492 465490 . + . ID=LTnewLM_360017700.1:pep;Derives_from=LTnewLM_360017700.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 467170 468282 1 + . ID=LTnewLM_360017800 LTnewLM_36 AUGUSTUS mRNA 467170 468282 1 + . ID=LTnewLM_360017800.1;Parent=LTnewLM_360017800 LTnewLM_36 AUGUSTUS CDS 467170 468282 1 + 0 ID=LTnewLM_360017800.1:CDS:1;Parent=LTnewLM_360017800.1 ### LTnewLM_36 . polypeptide 467170 468282 . + . ID=LTnewLM_360017800.1:pep;Derives_from=LTnewLM_360017800.1;orthologous_to=LmjF.36.1160_mRNA;ortholog_cluster=OG0006223;product=term%3DMemo-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01875 LTnewLM_36 Pfam protein_match 467341 468264 . + . Parent=LTnewLM_360017800.1:pep;Name=PF01875;signature_desc=Memo-like protein ### LTnewLM_36 AUGUSTUS gene 470066 471979 1 + . ID=LTnewLM_360017900 LTnewLM_36 AUGUSTUS mRNA 470066 471979 1 + . ID=LTnewLM_360017900.1;Parent=LTnewLM_360017900 LTnewLM_36 AUGUSTUS CDS 470066 471979 1 + 0 ID=LTnewLM_360017900.1:CDS:1;Parent=LTnewLM_360017900.1 ### LTnewLM_36 . polypeptide 470066 471979 . + . ID=LTnewLM_360017900.1:pep;Derives_from=LTnewLM_360017900.1;orthologous_to=LmjF.36.1170_mRNA;ortholog_cluster=OG0006224;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 473390 474397 1 + . ID=LTnewLM_360018000 LTnewLM_36 AUGUSTUS mRNA 473390 474397 1 + . ID=LTnewLM_360018000.1;Parent=LTnewLM_360018000 LTnewLM_36 AUGUSTUS CDS 473390 474397 1 + 0 ID=LTnewLM_360018000.1:CDS:1;Parent=LTnewLM_360018000.1 ### LTnewLM_36 . polypeptide 473390 474397 . + . ID=LTnewLM_360018000.1:pep;Derives_from=LTnewLM_360018000.1;orthologous_to=LmjF.36.1180_mRNA;ortholog_cluster=OG0006225;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 475605 476027 1 + . ID=LTnewLM_360018100 LTnewLM_36 AUGUSTUS mRNA 475605 476027 1 + . ID=LTnewLM_360018100.1;Parent=LTnewLM_360018100 LTnewLM_36 AUGUSTUS CDS 475605 476027 1 + 0 ID=LTnewLM_360018100.1:CDS:1;Parent=LTnewLM_360018100.1 ### LTnewLM_36 . polypeptide 475605 476027 . + . ID=LTnewLM_360018100.1:pep;Derives_from=LTnewLM_360018100.1;orthologous_to=LmjF.36.1190_mRNA;ortholog_cluster=OG0006226;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 477460 479340 1 + . ID=LTnewLM_360018200 LTnewLM_36 AUGUSTUS mRNA 477460 479340 1 + . ID=LTnewLM_360018200.1;Parent=LTnewLM_360018200 LTnewLM_36 AUGUSTUS CDS 477460 479340 1 + 0 ID=LTnewLM_360018200.1:CDS:1;Parent=LTnewLM_360018200.1 ### LTnewLM_36 . polypeptide 477460 479340 . + . ID=LTnewLM_360018200.1:pep;Derives_from=LTnewLM_360018200.1;orthologous_to=LmjF.36.1200_mRNA;ortholog_cluster=OG0006227;product=term%3DAlg9-like mannosyltransferase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03901;Ontology_term=GO:0016757 LTnewLM_36 Pfam protein_match 477511 478899 . + . Parent=LTnewLM_360018200.1:pep;Name=PF03901;signature_desc=Alg9-like mannosyltransferase family;Ontology_term=GO:0016757 ### LTnewLM_36 AUGUSTUS gene 480075 480839 1 + . ID=LTnewLM_360018300 LTnewLM_36 AUGUSTUS mRNA 480075 480839 1 + . ID=LTnewLM_360018300.1;Parent=LTnewLM_360018300 LTnewLM_36 AUGUSTUS CDS 480075 480839 1 + 0 ID=LTnewLM_360018300.1:CDS:1;Parent=LTnewLM_360018300.1 ### LTnewLM_36 . polypeptide 480075 480839 . + . ID=LTnewLM_360018300.1:pep;Derives_from=LTnewLM_360018300.1;orthologous_to=LmjF.36.1210_mRNA;ortholog_cluster=OG0006228;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 481442 482932 1 + . ID=LTnewLM_360018400 LTnewLM_36 AUGUSTUS mRNA 481442 482932 1 + . ID=LTnewLM_360018400.1;Parent=LTnewLM_360018400 LTnewLM_36 AUGUSTUS CDS 481442 482932 1 + 0 ID=LTnewLM_360018400.1:CDS:1;Parent=LTnewLM_360018400.1 ### LTnewLM_36 . polypeptide 481442 482932 . + . ID=LTnewLM_360018400.1:pep;Derives_from=LTnewLM_360018400.1;orthologous_to=LmjF.36.1220_mRNA;ortholog_cluster=OG0006229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 484775 486529 1 + . ID=LTnewLM_360018500 LTnewLM_36 AUGUSTUS mRNA 484775 486529 1 + . ID=LTnewLM_360018500.1;Parent=LTnewLM_360018500 LTnewLM_36 AUGUSTUS CDS 484775 486529 1 + 0 ID=LTnewLM_360018500.1:CDS:1;Parent=LTnewLM_360018500.1 ### LTnewLM_36 . polypeptide 484775 486529 . + . ID=LTnewLM_360018500.1:pep;Derives_from=LTnewLM_360018500.1;orthologous_to=LmjF.36.1230_mRNA;ortholog_cluster=OG0006230;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_36 Pfam protein_match 485684 486085 . + . Parent=LTnewLM_360018500.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_36 AUGUSTUS gene 487069 489390 1 + . ID=LTnewLM_360018600 LTnewLM_36 AUGUSTUS mRNA 487069 489390 1 + . ID=LTnewLM_360018600.1;Parent=LTnewLM_360018600 LTnewLM_36 AUGUSTUS CDS 487069 489390 1 + 0 ID=LTnewLM_360018600.1:CDS:1;Parent=LTnewLM_360018600.1 ### LTnewLM_36 . polypeptide 487069 489390 . + . ID=LTnewLM_360018600.1:pep;Derives_from=LTnewLM_360018600.1;orthologous_to=LmjF.36.1240_mRNA;ortholog_cluster=OG0006231;product=term%3DFamily of unknown function (DUF5393)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17371 LTnewLM_36 Pfam protein_match 487372 489366 . + . Parent=LTnewLM_360018600.1:pep;Name=PF17371;signature_desc=Family of unknown function (DUF5393) ### LTnewLM_36 AUGUSTUS gene 491152 491724 1 + . ID=LTnewLM_360018700 LTnewLM_36 AUGUSTUS mRNA 491152 491724 1 + . ID=LTnewLM_360018700.1;Parent=LTnewLM_360018700 LTnewLM_36 AUGUSTUS CDS 491152 491724 1 + 0 ID=LTnewLM_360018700.1:CDS:1;Parent=LTnewLM_360018700.1 ### LTnewLM_36 . polypeptide 491152 491724 . + . ID=LTnewLM_360018700.1:pep;Derives_from=LTnewLM_360018700.1;orthologous_to=LTnewLM_070013200.1,LmjF.07.0680_mRNA,LmjF.36.1250_mRNA;ortholog_cluster=OG0000257;product=term%3DRibosomal protein S4/S9 N-terminal domain/S4 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00163|Pfam:PF01479;Ontology_term=GO:0003723,GO:0019843,GO:0005622 LTnewLM_36 Pfam protein_match 491176 491463 . + . Parent=LTnewLM_360018700.1:pep;Name=PF00163;signature_desc=Ribosomal protein S4/S9 N-terminal domain;Ontology_term=GO:0019843,GO:0005622 LTnewLM_36 Pfam protein_match 491467 491598 . + . Parent=LTnewLM_360018700.1:pep;Name=PF01479;signature_desc=S4 domain;Ontology_term=GO:0003723 ### LTnewLM_36 AUGUSTUS gene 492648 493763 1 + . ID=LTnewLM_360018800 LTnewLM_36 AUGUSTUS mRNA 492648 493763 1 + . ID=LTnewLM_360018800.1;Parent=LTnewLM_360018800 LTnewLM_36 AUGUSTUS CDS 492648 493763 1 + 0 ID=LTnewLM_360018800.1:CDS:1;Parent=LTnewLM_360018800.1 ### LTnewLM_36 . polypeptide 492648 493763 . + . ID=LTnewLM_360018800.1:pep;Derives_from=LTnewLM_360018800.1;orthologous_to=LTnewLM_060009400.1,LmjF.36.1260_mRNA;ortholog_cluster=OG0000477;product=term%3DFructose-bisphosphate aldolase class-I%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00274;Ontology_term=GO:0006096,GO:0004332 LTnewLM_36 Pfam protein_match 492717 493757 . + . Parent=LTnewLM_360018800.1:pep;Name=PF00274;signature_desc=Fructose-bisphosphate aldolase class-I;Ontology_term=GO:0004332,GO:0006096 ### LTnewLM_36 . pseudogene 494370 494746 . + . ID=LTnewLM_360018900:pseudogene;coverage=0.916;sequence_ID=0.834;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1265_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 494370 494746 . + . ID=LTnewLM_360018900.1;Parent=LTnewLM_360018900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 494370 494746 . + . ID=LTnewLM_360018900.1:pseudogenic_exon:1;Parent=LTnewLM_360018900.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 494370 494746 . + . ID=LTnewLM_360018900.1:pep;Derives_from=LTnewLM_360018900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 498027 498608 1 + . ID=LTnewLM_360019000 LTnewLM_36 AUGUSTUS mRNA 498027 498608 1 + . ID=LTnewLM_360019000.1;Parent=LTnewLM_360019000 LTnewLM_36 AUGUSTUS CDS 498027 498608 1 + 0 ID=LTnewLM_360019000.1:CDS:1;Parent=LTnewLM_360019000.1 ### LTnewLM_36 . polypeptide 498027 498608 . + . ID=LTnewLM_360019000.1:pep;Derives_from=LTnewLM_360019000.1;orthologous_to=LmjF.36.1290_mRNA;ortholog_cluster=OG0006232;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 499286 500920 1 + . ID=LTnewLM_360019100 LTnewLM_36 AUGUSTUS mRNA 499286 500920 1 + . ID=LTnewLM_360019100.1;Parent=LTnewLM_360019100 LTnewLM_36 AUGUSTUS CDS 499286 500920 1 + 0 ID=LTnewLM_360019100.1:CDS:1;Parent=LTnewLM_360019100.1 ### LTnewLM_36 . polypeptide 499286 500920 . + . ID=LTnewLM_360019100.1:pep;Derives_from=LTnewLM_360019100.1;orthologous_to=LmjF.36.1300_mRNA;ortholog_cluster=OG0006233;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 502476 503249 1 + . ID=LTnewLM_360019200 LTnewLM_36 AUGUSTUS mRNA 502476 503249 1 + . ID=LTnewLM_360019200.1;Parent=LTnewLM_360019200 LTnewLM_36 AUGUSTUS CDS 502476 503249 1 + 0 ID=LTnewLM_360019200.1:CDS:1;Parent=LTnewLM_360019200.1 ### LTnewLM_36 . polypeptide 502476 503249 . + . ID=LTnewLM_360019200.1:pep;Derives_from=LTnewLM_360019200.1;orthologous_to=LmjF.36.1310_mRNA;ortholog_cluster=OG0006234;product=term%3DBILBO1 N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18281 LTnewLM_36 Pfam protein_match 502515 502796 . + . Parent=LTnewLM_360019200.1:pep;Name=PF18281;signature_desc=BILBO1 N-terminal domain ### LTnewLM_36 AUGUSTUS gene 504074 505360 1 + . ID=LTnewLM_360019300 LTnewLM_36 AUGUSTUS mRNA 504074 505360 1 + . ID=LTnewLM_360019300.1;Parent=LTnewLM_360019300 LTnewLM_36 AUGUSTUS CDS 504074 505360 1 + 0 ID=LTnewLM_360019300.1:CDS:1;Parent=LTnewLM_360019300.1 ### LTnewLM_36 . polypeptide 504074 505360 . + . ID=LTnewLM_360019300.1:pep;Derives_from=LTnewLM_360019300.1;orthologous_to=LmjF.36.1320_mRNA;ortholog_cluster=OG0006235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Liftoff gene 506107 507201 . + . ID=LTnewLM_360019400;coverage=1.0;sequence_ID=0.955;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.1330_0 LTnewLM_36 Liftoff mRNA 506107 507201 . + . ID=LTnewLM_360019400.1;Parent=LTnewLM_360019400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 506107 507201 . + 0 ID=LTnewLM_360019400.1:CDS:1;Parent=LTnewLM_360019400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 506107 507201 . + . ID=LTnewLM_360019400.1:pep;Derives_from=LTnewLM_360019400.1;orthologous_to=LmjF.36.1330_mRNA;ortholog_cluster=OG0006236;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 508161 510296 1 + . ID=LTnewLM_360019500 LTnewLM_36 AUGUSTUS mRNA 508161 510296 1 + . ID=LTnewLM_360019500.1;Parent=LTnewLM_360019500 LTnewLM_36 AUGUSTUS CDS 508161 510296 1 + 0 ID=LTnewLM_360019500.1:CDS:1;Parent=LTnewLM_360019500.1 ### LTnewLM_36 . polypeptide 508161 510296 . + . ID=LTnewLM_360019500.1:pep;Derives_from=LTnewLM_360019500.1;orthologous_to=LmjF.36.1340_mRNA;ortholog_cluster=OG0006237;product=term%3DTetratricopeptide repeat/N-terminal acetyltransferase A%2C auxiliary subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF12569;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 508404 508496 . + . Parent=LTnewLM_360019500.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 508716 509993 . + . Parent=LTnewLM_360019500.1:pep;Name=PF12569;signature_desc=N-terminal acetyltransferase A%2C auxiliary subunit ### LTnewLM_36 Liftoff gene 511164 511883 . + . ID=LTnewLM_360019600;coverage=1.0;sequence_ID=0.940;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.1350_0 LTnewLM_36 Liftoff mRNA 511164 511883 . + . ID=LTnewLM_360019600.1;Parent=LTnewLM_360019600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 511164 511883 . + 0 ID=LTnewLM_360019600.1:CDS:1;Parent=LTnewLM_360019600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 511164 511883 . + . ID=LTnewLM_360019600.1:pep;Derives_from=LTnewLM_360019600.1;orthologous_to=LmjF.36.1350_mRNA;ortholog_cluster=OG0006238;product=term%3DPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/PBZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00645|Pfam:PF10283;Ontology_term=GO:0008270,GO:0003677 LTnewLM_36 Pfam protein_match 511182 511427 . + . Parent=LTnewLM_360019600.1:pep;Name=PF00645;signature_desc=Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region;Ontology_term=GO:0003677,GO:0008270 LTnewLM_36 Pfam protein_match 511722 511796 . + . Parent=LTnewLM_360019600.1:pep;Name=PF10283;signature_desc=PBZ domain ### LTnewLM_36 Aragorn_1.2.36 gene 513848 513932 . - . ID=LTnewLM_360019700 LTnewLM_36 Aragorn_1.2.36 tRNA 513848 513932 . - . ID=LTnewLM_360019700:tRNA;Parent=LTnewLM_360019700;aa=Leu;anticodon=tag;gc_content=54.1 ### LTnewLM_36 Aragorn_1.2.36 gene 514009 514081 . - . ID=LTnewLM_360019800 LTnewLM_36 Aragorn_1.2.36 tRNA 514009 514081 . - . ID=LTnewLM_360019800:tRNA;Parent=LTnewLM_360019800;aa=Thr;anticodon=agt;gc_content=63.0 ### LTnewLM_36 Aragorn_1.2.36 gene 514902 514974 . + . ID=LTnewLM_360019900 LTnewLM_36 Aragorn_1.2.36 tRNA 514902 514974 . + . ID=LTnewLM_360019900:tRNA;Parent=LTnewLM_360019900;aa=Thr;anticodon=agt;gc_content=63.0 ### LTnewLM_36 Aragorn_1.2.36 gene 515052 515136 . + . ID=LTnewLM_360020000 LTnewLM_36 Aragorn_1.2.36 tRNA 515052 515136 . + . ID=LTnewLM_360020000:tRNA;Parent=LTnewLM_360020000;aa=Leu;anticodon=tag;gc_content=54.1 ### LTnewLM_36 AUGUSTUS gene 518107 518769 1 - . ID=LTnewLM_360020100 LTnewLM_36 AUGUSTUS mRNA 518107 518769 1 - . ID=LTnewLM_360020100.1;Parent=LTnewLM_360020100 LTnewLM_36 AUGUSTUS CDS 518107 518769 1 - 0 ID=LTnewLM_360020100.1:CDS:1;Parent=LTnewLM_360020100.1 ### LTnewLM_36 . polypeptide 518107 518769 . - . ID=LTnewLM_360020100.1:pep;Derives_from=LTnewLM_360020100.1;orthologous_to=LmjF.36.1360_mRNA;ortholog_cluster=OG0006239;product=term%3DAAA domain/Adenylate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13238|Pfam:PF00406|Pfam:PF13207 LTnewLM_36 Pfam protein_match 518227 518751 . - . Parent=LTnewLM_360020100.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_36 Pfam protein_match 518392 518748 . - . Parent=LTnewLM_360020100.1:pep;Name=PF13207;signature_desc=AAA domain LTnewLM_36 Pfam protein_match 518392 518757 . - . Parent=LTnewLM_360020100.1:pep;Name=PF13238;signature_desc=AAA domain ### LTnewLM_36 AUGUSTUS gene 520241 522595 1 - . ID=LTnewLM_360020200 LTnewLM_36 AUGUSTUS mRNA 520241 522595 1 - . ID=LTnewLM_360020200.1;Parent=LTnewLM_360020200 LTnewLM_36 AUGUSTUS CDS 520241 522595 1 - 0 ID=LTnewLM_360020200.1:CDS:1;Parent=LTnewLM_360020200.1 ### LTnewLM_36 . polypeptide 520241 522595 . - . ID=LTnewLM_360020200.1:pep;Derives_from=LTnewLM_360020200.1;orthologous_to=LmjF.36.1370_mRNA;ortholog_cluster=OG0006240;product=term%3DCell division protein 48 (CDC48)%2C N-terminal domain/Cell division protein 48 (CDC48)%2C domain 2/AAA domain (Cdc48 subfamily)/AAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02359|Pfam:PF02933|Pfam:PF07724|Pfam:PF07728|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_36 Pfam protein_match 520496 520627 . - . Parent=LTnewLM_360020200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_36 Pfam protein_match 520694 521086 . - . Parent=LTnewLM_360020200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 521270 521449 . - . Parent=LTnewLM_360020200.1:pep;Name=PF17862;signature_desc=AAA+ lid domain LTnewLM_36 Pfam protein_match 521519 521905 . - . Parent=LTnewLM_360020200.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 521552 521905 . - . Parent=LTnewLM_360020200.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_36 Pfam protein_match 521627 521905 . - . Parent=LTnewLM_360020200.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 522062 522247 . - . Parent=LTnewLM_360020200.1:pep;Name=PF02933;signature_desc=Cell division protein 48 (CDC48)%2C domain 2 LTnewLM_36 Pfam protein_match 522308 522550 . - . Parent=LTnewLM_360020200.1:pep;Name=PF02359;signature_desc=Cell division protein 48 (CDC48)%2C N-terminal domain ### LTnewLM_36 AUGUSTUS gene 525644 527296 1 - . ID=LTnewLM_360020300 LTnewLM_36 AUGUSTUS mRNA 525644 527296 1 - . ID=LTnewLM_360020300.1;Parent=LTnewLM_360020300 LTnewLM_36 AUGUSTUS CDS 525644 527296 1 - 0 ID=LTnewLM_360020300.1:CDS:1;Parent=LTnewLM_360020300.1 ### LTnewLM_36 . polypeptide 525644 527296 . - . ID=LTnewLM_360020300.1:pep;Derives_from=LTnewLM_360020300.1;orthologous_to=LmjF.36.1380_mRNA;ortholog_cluster=OG0006241;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 528124 531444 1 - . ID=LTnewLM_360020400 LTnewLM_36 AUGUSTUS mRNA 528124 531444 1 - . ID=LTnewLM_360020400.1;Parent=LTnewLM_360020400 LTnewLM_36 AUGUSTUS CDS 528124 531444 1 - 0 ID=LTnewLM_360020400.1:CDS:1;Parent=LTnewLM_360020400.1 ### LTnewLM_36 . polypeptide 528124 531444 . - . ID=LTnewLM_360020400.1:pep;Derives_from=LTnewLM_360020400.1;orthologous_to=LmjF.36.1390_mRNA;ortholog_cluster=OG0006242;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 532296 532850 1 - . ID=LTnewLM_360020500 LTnewLM_36 AUGUSTUS mRNA 532296 532850 1 - . ID=LTnewLM_360020500.1;Parent=LTnewLM_360020500 LTnewLM_36 AUGUSTUS CDS 532296 532850 1 - 0 ID=LTnewLM_360020500.1:CDS:1;Parent=LTnewLM_360020500.1 ### LTnewLM_36 . polypeptide 532296 532850 . - . ID=LTnewLM_360020500.1:pep;Derives_from=LTnewLM_360020500.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 538352 539704 1 - . ID=LTnewLM_360020600 LTnewLM_36 AUGUSTUS mRNA 538352 539704 1 - . ID=LTnewLM_360020600.1;Parent=LTnewLM_360020600 LTnewLM_36 AUGUSTUS CDS 538352 539704 1 - 0 ID=LTnewLM_360020600.1:CDS:1;Parent=LTnewLM_360020600.1 ### LTnewLM_36 . polypeptide 538352 539704 . - . ID=LTnewLM_360020600.1:pep;Derives_from=LTnewLM_360020600.1;orthologous_to=LmjF.36.1400_mRNA;ortholog_cluster=OG0006243;product=term%3DThe ARF-like 2 binding protein BART%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11527 LTnewLM_36 Pfam protein_match 539330 539698 . - . Parent=LTnewLM_360020600.1:pep;Name=PF11527;signature_desc=The ARF-like 2 binding protein BART ### LTnewLM_36 Liftoff gene 540989 543700 . - . ID=LTnewLM_360020700;coverage=1.0;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1410_0 LTnewLM_36 Liftoff mRNA 540989 543700 . - . ID=LTnewLM_360020700.1;Parent=LTnewLM_360020700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 540989 543700 . - 0 ID=LTnewLM_360020700.1:CDS:1;Parent=LTnewLM_360020700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 540989 543700 . - . ID=LTnewLM_360020700.1:pep;Derives_from=LTnewLM_360020700.1;orthologous_to=LmjF.36.1410_mRNA;ortholog_cluster=OG0006244;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 545037 546722 1 - . ID=LTnewLM_360020800 LTnewLM_36 AUGUSTUS mRNA 545037 546722 1 - . ID=LTnewLM_360020800.1;Parent=LTnewLM_360020800 LTnewLM_36 AUGUSTUS CDS 545037 546722 1 - 0 ID=LTnewLM_360020800.1:CDS:1;Parent=LTnewLM_360020800.1 ### LTnewLM_36 . polypeptide 545037 546722 . - . ID=LTnewLM_360020800.1:pep;Derives_from=LTnewLM_360020800.1;orthologous_to=LmjF.36.1420_mRNA;ortholog_cluster=OG0006245;product=term%3DZn-finger in Ran binding protein and others%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00641;Ontology_term=GO:0008270 LTnewLM_36 Pfam protein_match 545094 545174 . - . Parent=LTnewLM_360020800.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 LTnewLM_36 Pfam protein_match 545469 545546 . - . Parent=LTnewLM_360020800.1:pep;Name=PF00641;signature_desc=Zn-finger in Ran binding protein and others;Ontology_term=GO:0008270 ### LTnewLM_36 AUGUSTUS gene 549138 549773 1 - . ID=LTnewLM_360020900 LTnewLM_36 AUGUSTUS mRNA 549138 549773 1 - . ID=LTnewLM_360020900.1;Parent=LTnewLM_360020900 LTnewLM_36 AUGUSTUS CDS 549138 549773 1 - 0 ID=LTnewLM_360020900.1:CDS:1;Parent=LTnewLM_360020900.1 ### LTnewLM_36 . polypeptide 549138 549773 . - . ID=LTnewLM_360020900.1:pep;Derives_from=LTnewLM_360020900.1;orthologous_to=LmjF.36.1430_mRNA;ortholog_cluster=OG0006246;product=term%3DEF-1 guanine nucleotide exchange domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00736;Ontology_term=GO:0003746,GO:0005853,GO:0006414 LTnewLM_36 Pfam protein_match 549144 549395 . - . Parent=LTnewLM_360020900.1:pep;Name=PF00736;signature_desc=EF-1 guanine nucleotide exchange domain;Ontology_term=GO:0003746,GO:0006414,GO:0005853 ### LTnewLM_36 AUGUSTUS gene 550691 567493 0.5 - . ID=LTnewLM_360021000 LTnewLM_36 AUGUSTUS mRNA 550691 567493 0.5 - . ID=LTnewLM_360021000.1;Parent=LTnewLM_360021000 LTnewLM_36 AUGUSTUS CDS 550691 558840 0.83 - 2 ID=LTnewLM_360021000.1:CDS:1;Parent=LTnewLM_360021000.1 LTnewLM_36 AUGUSTUS CDS 558973 567493 0.56 - 0 ID=LTnewLM_360021000.1:CDS:2;Parent=LTnewLM_360021000.1 ### LTnewLM_36 . polypeptide 550691 567493 . - . ID=LTnewLM_360021000.1:pep;Derives_from=LTnewLM_360021000.1;orthologous_to=LmjF.36.1440_mRNA;ortholog_cluster=OG0006247;product=term%3DN-terminal region of Chorein or VPS13/Vacuolar-sorting-associated 13 protein C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12624|Pfam:PF16909 LTnewLM_36 Pfam protein_match 551969 552310 . - . Parent=LTnewLM_360021000.1:pep;Name=PF16909;signature_desc=Vacuolar-sorting-associated 13 protein C-terminal LTnewLM_36 Pfam protein_match 567008 567205 . - . Parent=LTnewLM_360021000.1:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 LTnewLM_36 Pfam protein_match 567347 567490 . - . Parent=LTnewLM_360021000.1:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 ### LTnewLM_36 AUGUSTUS gene 569484 569951 1 - . ID=LTnewLM_360021100 LTnewLM_36 AUGUSTUS mRNA 569484 569951 1 - . ID=LTnewLM_360021100.1;Parent=LTnewLM_360021100 LTnewLM_36 AUGUSTUS CDS 569484 569951 1 - 0 ID=LTnewLM_360021100.1:CDS:1;Parent=LTnewLM_360021100.1 ### LTnewLM_36 . polypeptide 569484 569951 . - . ID=LTnewLM_360021100.1:pep;Derives_from=LTnewLM_360021100.1;orthologous_to=LmjF.36.1450_mRNA;ortholog_cluster=OG0006248;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 571091 573055 1 - . ID=LTnewLM_360021200 LTnewLM_36 AUGUSTUS mRNA 571091 573055 1 - . ID=LTnewLM_360021200.1;Parent=LTnewLM_360021200 LTnewLM_36 AUGUSTUS CDS 571091 573055 1 - 0 ID=LTnewLM_360021200.1:CDS:1;Parent=LTnewLM_360021200.1 ### LTnewLM_36 . polypeptide 571091 573055 . - . ID=LTnewLM_360021200.1:pep;Derives_from=LTnewLM_360021200.1;orthologous_to=LmjF.36.1460_mRNA;ortholog_cluster=OG0006249;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 573900 577289 1 - . ID=LTnewLM_360021300 LTnewLM_36 AUGUSTUS mRNA 573900 577289 1 - . ID=LTnewLM_360021300.1;Parent=LTnewLM_360021300 LTnewLM_36 AUGUSTUS CDS 573900 577289 1 - 0 ID=LTnewLM_360021300.1:CDS:1;Parent=LTnewLM_360021300.1 ### LTnewLM_36 . polypeptide 573900 577289 . - . ID=LTnewLM_360021300.1:pep;Derives_from=LTnewLM_360021300.1;orthologous_to=LmjF.36.1470_mRNA;ortholog_cluster=OG0006250;product=term%3DKelch motif/Galactose oxidase%2C central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01344|Pfam:PF07646|Pfam:PF13418;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 576720 576857 . - . Parent=LTnewLM_360021300.1:pep;Name=PF13418;signature_desc=Galactose oxidase%2C central domain LTnewLM_36 Pfam protein_match 576729 576857 . - . Parent=LTnewLM_360021300.1:pep;Name=PF07646;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 576735 576854 . - . Parent=LTnewLM_360021300.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 576885 576977 . - . Parent=LTnewLM_360021300.1:pep;Name=PF01344;signature_desc=Kelch motif;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 578003 579478 0.92 - . ID=LTnewLM_360021400 LTnewLM_36 AUGUSTUS mRNA 578003 579478 0.92 - . ID=LTnewLM_360021400.1;Parent=LTnewLM_360021400 LTnewLM_36 AUGUSTUS CDS 578003 579478 0.92 - 0 ID=LTnewLM_360021400.1:CDS:1;Parent=LTnewLM_360021400.1 ### LTnewLM_36 . polypeptide 578003 579478 . - . ID=LTnewLM_360021400.1:pep;Derives_from=LTnewLM_360021400.1;orthologous_to=LmjF.36.1480_mRNA;ortholog_cluster=OG0006251;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 581202 584807 1 - . ID=LTnewLM_360021500 LTnewLM_36 AUGUSTUS mRNA 581202 584807 1 - . ID=LTnewLM_360021500.1;Parent=LTnewLM_360021500 LTnewLM_36 AUGUSTUS CDS 581202 584807 1 - 0 ID=LTnewLM_360021500.1:CDS:1;Parent=LTnewLM_360021500.1 ### LTnewLM_36 . polypeptide 581202 584807 . - . ID=LTnewLM_360021500.1:pep;Derives_from=LTnewLM_360021500.1;orthologous_to=LmjF.36.1490_mRNA;ortholog_cluster=OG0006252;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 586442 589288 1 - . ID=LTnewLM_360021600 LTnewLM_36 AUGUSTUS mRNA 586442 589288 1 - . ID=LTnewLM_360021600.1;Parent=LTnewLM_360021600 LTnewLM_36 AUGUSTUS CDS 586442 589288 1 - 0 ID=LTnewLM_360021600.1:CDS:1;Parent=LTnewLM_360021600.1 ### LTnewLM_36 . polypeptide 586442 589288 . - . ID=LTnewLM_360021600.1:pep;Derives_from=LTnewLM_360021600.1;orthologous_to=LmjF.36.1500_mRNA;ortholog_cluster=OG0006253;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 590196 590720 1 - . ID=LTnewLM_360021700 LTnewLM_36 AUGUSTUS mRNA 590196 590720 1 - . ID=LTnewLM_360021700.1;Parent=LTnewLM_360021700 LTnewLM_36 AUGUSTUS CDS 590196 590720 1 - 0 ID=LTnewLM_360021700.1:CDS:1;Parent=LTnewLM_360021700.1 ### LTnewLM_36 . polypeptide 590196 590720 . - . ID=LTnewLM_360021700.1:pep;Derives_from=LTnewLM_360021700.1;orthologous_to=LmjF.36.1510_mRNA;ortholog_cluster=OG0006254;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 596044 597576 1 - . ID=LTnewLM_360021800 LTnewLM_36 AUGUSTUS mRNA 596044 597576 1 - . ID=LTnewLM_360021800.1;Parent=LTnewLM_360021800 LTnewLM_36 AUGUSTUS CDS 596044 597576 1 - 0 ID=LTnewLM_360021800.1:CDS:1;Parent=LTnewLM_360021800.1 ### LTnewLM_36 . polypeptide 596044 597576 . - . ID=LTnewLM_360021800.1:pep;Derives_from=LTnewLM_360021800.1;orthologous_to=LmjF.36.1520_mRNA;ortholog_cluster=OG0006255;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 596680 597462 . - . Parent=LTnewLM_360021800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 596689 597462 . - . Parent=LTnewLM_360021800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 596830 597207 . - . Parent=LTnewLM_360021800.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_36 AUGUSTUS gene 602543 604048 1 - . ID=LTnewLM_360021900 LTnewLM_36 AUGUSTUS mRNA 602543 604048 1 - . ID=LTnewLM_360021900.1;Parent=LTnewLM_360021900 LTnewLM_36 AUGUSTUS CDS 602543 604048 1 - 0 ID=LTnewLM_360021900.1:CDS:1;Parent=LTnewLM_360021900.1 ### LTnewLM_36 . polypeptide 602543 604048 . - . ID=LTnewLM_360021900.1:pep;Derives_from=LTnewLM_360021900.1;orthologous_to=LmjF.36.1530_mRNA;ortholog_cluster=OG0006256;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like/PH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531|Pfam:PF00169;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 602573 602908 . - . Parent=LTnewLM_360021900.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_36 Pfam protein_match 603137 603919 . - . Parent=LTnewLM_360021900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 603146 603919 . - . Parent=LTnewLM_360021900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 603179 603658 . - . Parent=LTnewLM_360021900.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_36 AUGUSTUS gene 608933 611740 1 - . ID=LTnewLM_360022000 LTnewLM_36 AUGUSTUS mRNA 608933 611740 1 - . ID=LTnewLM_360022000.1;Parent=LTnewLM_360022000 LTnewLM_36 AUGUSTUS CDS 608933 611740 1 - 0 ID=LTnewLM_360022000.1:CDS:1;Parent=LTnewLM_360022000.1 ### LTnewLM_36 . polypeptide 608933 611740 . - . ID=LTnewLM_360022000.1:pep;Derives_from=LTnewLM_360022000.1;orthologous_to=LmjF.36.1540_mRNA;ortholog_cluster=OG0006257;product=term%3DELMO/CED-12 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04727;Ontology_term=GO:0006909,GO:0005856 LTnewLM_36 Pfam protein_match 609089 609769 . - . Parent=LTnewLM_360022000.1:pep;Name=PF04727;signature_desc=ELMO/CED-12 family;Ontology_term=GO:0006909,GO:0005856 ### LTnewLM_36 AUGUSTUS gene 615412 617958 1 - . ID=LTnewLM_360022100 LTnewLM_36 AUGUSTUS mRNA 615412 617958 1 - . ID=LTnewLM_360022100.1;Parent=LTnewLM_360022100 LTnewLM_36 AUGUSTUS CDS 615412 617958 1 - 0 ID=LTnewLM_360022100.1:CDS:1;Parent=LTnewLM_360022100.1 ### LTnewLM_36 . polypeptide 615412 617958 . - . ID=LTnewLM_360022100.1:pep;Derives_from=LTnewLM_360022100.1;orthologous_to=LmjF.36.1550_mRNA;ortholog_cluster=OG0006258;product=term%3DB-box zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00643;Ontology_term=GO:0008270,GO:0005622 LTnewLM_36 Pfam protein_match 617014 617133 . - . Parent=LTnewLM_360022100.1:pep;Name=PF00643;signature_desc=B-box zinc finger;Ontology_term=GO:0008270,GO:0005622 ### LTnewLM_36 AUGUSTUS gene 620178 621689 1 - . ID=LTnewLM_360022200 LTnewLM_36 AUGUSTUS mRNA 620178 621689 1 - . ID=LTnewLM_360022200.1;Parent=LTnewLM_360022200 LTnewLM_36 AUGUSTUS CDS 620178 621689 1 - 0 ID=LTnewLM_360022200.1:CDS:1;Parent=LTnewLM_360022200.1 ### LTnewLM_36 . polypeptide 620178 621689 . - . ID=LTnewLM_360022200.1:pep;Derives_from=LTnewLM_360022200.1;orthologous_to=LmjF.36.1560_mRNA;ortholog_cluster=OG0006259;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 621072 621227 . - . Parent=LTnewLM_360022200.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 622838 624268 1 - . ID=LTnewLM_360022300 LTnewLM_36 AUGUSTUS mRNA 622838 624268 1 - . ID=LTnewLM_360022300.1;Parent=LTnewLM_360022300 LTnewLM_36 AUGUSTUS CDS 622838 624268 1 - 0 ID=LTnewLM_360022300.1:CDS:1;Parent=LTnewLM_360022300.1 ### LTnewLM_36 . polypeptide 622838 624268 . - . ID=LTnewLM_360022300.1:pep;Derives_from=LTnewLM_360022300.1;orthologous_to=LmjF.36.1570_mRNA;ortholog_cluster=OG0006260;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 625884 631370 1 - . ID=LTnewLM_360022400 LTnewLM_36 AUGUSTUS mRNA 625884 631370 1 - . ID=LTnewLM_360022400.1;Parent=LTnewLM_360022400 LTnewLM_36 AUGUSTUS CDS 625884 631370 1 - 0 ID=LTnewLM_360022400.1:CDS:1;Parent=LTnewLM_360022400.1 ### LTnewLM_36 . polypeptide 625884 631370 . - . ID=LTnewLM_360022400.1:pep;Derives_from=LTnewLM_360022400.1;orthologous_to=LmjF.36.1580_mRNA;ortholog_cluster=OG0006261;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 633930 637556 1 - . ID=LTnewLM_360022500 LTnewLM_36 AUGUSTUS mRNA 633930 637556 1 - . ID=LTnewLM_360022500.1;Parent=LTnewLM_360022500 LTnewLM_36 AUGUSTUS CDS 633930 637556 1 - 0 ID=LTnewLM_360022500.1:CDS:1;Parent=LTnewLM_360022500.1 ### LTnewLM_36 . polypeptide 633930 637556 . - . ID=LTnewLM_360022500.1:pep;Derives_from=LTnewLM_360022500.1;orthologous_to=LmjF.36.1590_mRNA;ortholog_cluster=OG0006262;product=term%3DSTAG domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08514 LTnewLM_36 Pfam protein_match 636765 637046 . - . Parent=LTnewLM_360022500.1:pep;Name=PF08514;signature_desc=STAG domain ### LTnewLM_36 AUGUSTUS gene 638937 639308 1 - . ID=LTnewLM_360022600 LTnewLM_36 AUGUSTUS mRNA 638937 639308 1 - . ID=LTnewLM_360022600.1;Parent=LTnewLM_360022600 LTnewLM_36 AUGUSTUS CDS 638937 639308 1 - 0 ID=LTnewLM_360022600.1:CDS:1;Parent=LTnewLM_360022600.1 ### LTnewLM_36 . polypeptide 638937 639308 . - . ID=LTnewLM_360022600.1:pep;Derives_from=LTnewLM_360022600.1;orthologous_to=LmjF.36.1595_mRNA;ortholog_cluster=OG0006263;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 640376 641170 1 - . ID=LTnewLM_360022700 LTnewLM_36 AUGUSTUS mRNA 640376 641170 1 - . ID=LTnewLM_360022700.1;Parent=LTnewLM_360022700 LTnewLM_36 AUGUSTUS CDS 640376 641170 1 - 0 ID=LTnewLM_360022700.1:CDS:1;Parent=LTnewLM_360022700.1 ### LTnewLM_36 . polypeptide 640376 641170 . - . ID=LTnewLM_360022700.1:pep;Derives_from=LTnewLM_360022700.1;orthologous_to=LmjF.36.1600_mRNA;ortholog_cluster=OG0006264;product=term%3DProteasome subunit A N-terminal signature/Proteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10584|Pfam:PF00227;Ontology_term=GO:0004175,GO:0006511,GO:0005839,GO:0051603,GO:0004298,GO:0019773 LTnewLM_36 Pfam protein_match 640526 641086 . - . Parent=LTnewLM_360022700.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 LTnewLM_36 Pfam protein_match 641090 641155 . - . Parent=LTnewLM_360022700.1:pep;Name=PF10584;signature_desc=Proteasome subunit A N-terminal signature;Ontology_term=GO:0004175,GO:0006511,GO:0019773 ### LTnewLM_36 . pseudogene 646938 647457 . - . ID=LTnewLM_360022800:pseudogene;coverage=0.975;sequence_ID=0.923;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.1620_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 646938 647457 . - . ID=LTnewLM_360022800.1;Parent=LTnewLM_360022800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 646938 647457 . - . ID=LTnewLM_360022800.1:pseudogenic_exon:1;Parent=LTnewLM_360022800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 646938 647457 . - . ID=LTnewLM_360022800.1:pep;Derives_from=LTnewLM_360022800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 650690 651037 1 - . ID=LTnewLM_360022900 LTnewLM_36 AUGUSTUS mRNA 650690 651037 1 - . ID=LTnewLM_360022900.1;Parent=LTnewLM_360022900 LTnewLM_36 AUGUSTUS CDS 650690 651037 1 - 0 ID=LTnewLM_360022900.1:CDS:1;Parent=LTnewLM_360022900.1 ### LTnewLM_36 . polypeptide 650690 651037 . - . ID=LTnewLM_360022900.1:pep;Derives_from=LTnewLM_360022900.1;orthologous_to=LmjF.36.1610_mRNA;ortholog_cluster=OG0006265;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00098|Pfam:PF14392|Pfam:PF13917;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650705 650749 . - . Parent=LTnewLM_360022900.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650705 650752 . - . Parent=LTnewLM_360022900.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650705 650764 . - . Parent=LTnewLM_360022900.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650759 650818 . - . Parent=LTnewLM_360022900.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650768 650815 . - . Parent=LTnewLM_360022900.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650771 650818 . - . Parent=LTnewLM_360022900.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650834 650896 . - . Parent=LTnewLM_360022900.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650846 650893 . - . Parent=LTnewLM_360022900.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650849 650908 . - . Parent=LTnewLM_360022900.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650903 650971 . - . Parent=LTnewLM_360022900.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650912 650959 . - . Parent=LTnewLM_360022900.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650915 650962 . - . Parent=LTnewLM_360022900.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650978 651028 . - . Parent=LTnewLM_360022900.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 650981 651028 . - . Parent=LTnewLM_360022900.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 650981 651028 . - . Parent=LTnewLM_360022900.1:pep;Name=PF14392;signature_desc=Zinc knuckle ### LTnewLM_36 AUGUSTUS gene 653853 658934 1 - . ID=LTnewLM_360023000 LTnewLM_36 AUGUSTUS mRNA 653853 658934 1 - . ID=LTnewLM_360023000.1;Parent=LTnewLM_360023000 LTnewLM_36 AUGUSTUS CDS 653853 653876 1 - 0 ID=LTnewLM_360023000.1:CDS:1;Parent=LTnewLM_360023000.1 LTnewLM_36 AUGUSTUS CDS 653919 658934 1 - 0 ID=LTnewLM_360023000.1:CDS:2;Parent=LTnewLM_360023000.1 ### LTnewLM_36 . polypeptide 653853 658934 . - . ID=LTnewLM_360023000.1:pep;Derives_from=LTnewLM_360023000.1;orthologous_to=LmjF.36.1630_mRNA;ortholog_cluster=OG0006266;product=term%3DClathrin%2C heavy-chain linker/Clathrin-H-link/Region in Clathrin and VPS%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09268|Pfam:PF13838|Pfam:PF00637;Ontology_term=GO:0005198,GO:0030132,GO:0030130,GO:0016192,GO:0006886 LTnewLM_36 Pfam protein_match 654204 654608 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 654636 655055 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 655089 655508 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 655533 655952 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 655998 656384 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 656421 656825 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 656865 657284 . - . Parent=LTnewLM_360023000.1:pep;Name=PF00637;signature_desc=Region in Clathrin and VPS;Ontology_term=GO:0006886,GO:0016192 LTnewLM_36 Pfam protein_match 657669 657860 . - . Parent=LTnewLM_360023000.1:pep;Name=PF13838;signature_desc=Clathrin-H-link LTnewLM_36 Pfam protein_match 657870 657935 . - . Parent=LTnewLM_360023000.1:pep;Name=PF09268;signature_desc=Clathrin%2C heavy-chain linker;Ontology_term=GO:0005198,GO:0006886,GO:0016192,GO:0030130,GO:0030132 ### LTnewLM_36 AUGUSTUS gene 665786 666193 1 - . ID=LTnewLM_360023100 LTnewLM_36 AUGUSTUS mRNA 665786 666193 1 - . ID=LTnewLM_360023100.1;Parent=LTnewLM_360023100 LTnewLM_36 AUGUSTUS CDS 665786 666193 1 - 0 ID=LTnewLM_360023100.1:CDS:1;Parent=LTnewLM_360023100.1 ### LTnewLM_36 . polypeptide 665786 666193 . - . ID=LTnewLM_360023100.1:pep;Derives_from=LTnewLM_360023100.1;orthologous_to=LmjF.36.1635_mRNA;ortholog_cluster=OG0006267;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00098|Pfam:PF13917;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 665798 665845 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 665801 665851 . - . Parent=LTnewLM_360023100.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 665876 665917 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 665927 665986 . - . Parent=LTnewLM_360023100.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 665930 665974 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 666005 666052 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 666026 666130 . - . Parent=LTnewLM_360023100.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 666083 666124 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 666143 666190 . - . Parent=LTnewLM_360023100.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 ### LTnewLM_36 AUGUSTUS gene 670772 671587 1 - . ID=LTnewLM_360023200 LTnewLM_36 AUGUSTUS mRNA 670772 671587 1 - . ID=LTnewLM_360023200.1;Parent=LTnewLM_360023200 LTnewLM_36 AUGUSTUS CDS 670772 671587 1 - 0 ID=LTnewLM_360023200.1:CDS:1;Parent=LTnewLM_360023200.1 ### LTnewLM_36 . polypeptide 670772 671587 . - . ID=LTnewLM_360023200.1:pep;Derives_from=LTnewLM_360023200.1;orthologous_to=LmjF.36.1640_mRNA;ortholog_cluster=OG0006268;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13917|Pfam:PF14392|Pfam:PF00098;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 670781 670831 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 670784 670831 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 670784 670837 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 670868 670930 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 670874 670924 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 670877 670924 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 670943 671002 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 670952 671002 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 670955 670999 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671027 671089 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671036 671086 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671039 671086 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671111 671176 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671120 671170 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671123 671170 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671249 671296 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671252 671293 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671324 671383 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671330 671377 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671333 671377 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671405 671467 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671411 671458 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671414 671461 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671492 671536 . - . Parent=LTnewLM_360023200.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 671492 671548 . - . Parent=LTnewLM_360023200.1:pep;Name=PF13917;signature_desc=Zinc knuckle LTnewLM_36 Pfam protein_match 671495 671539 . - . Parent=LTnewLM_360023200.1:pep;Name=PF14392;signature_desc=Zinc knuckle ### LTnewLM_36 AUGUSTUS gene 672670 673578 1 - . ID=LTnewLM_360023300 LTnewLM_36 AUGUSTUS mRNA 672670 673578 1 - . ID=LTnewLM_360023300.1;Parent=LTnewLM_360023300 LTnewLM_36 AUGUSTUS CDS 672670 673578 1 - 0 ID=LTnewLM_360023300.1:CDS:1;Parent=LTnewLM_360023300.1 ### LTnewLM_36 . polypeptide 672670 673578 . - . ID=LTnewLM_360023300.1:pep;Derives_from=LTnewLM_360023300.1;orthologous_to=LmjF.36.1650_mRNA;ortholog_cluster=OG0006269;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_36 Pfam protein_match 672748 673293 . - . Parent=LTnewLM_360023300.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_36 AUGUSTUS gene 674553 677186 0.45 - . ID=LTnewLM_360023400 LTnewLM_36 AUGUSTUS mRNA 674553 677186 0.45 - . ID=LTnewLM_360023400.1;Parent=LTnewLM_360023400 LTnewLM_36 AUGUSTUS CDS 674553 676837 0.78 - 2 ID=LTnewLM_360023400.1:CDS:1;Parent=LTnewLM_360023400.1 LTnewLM_36 AUGUSTUS CDS 677138 677186 0.45 - 0 ID=LTnewLM_360023400.1:CDS:2;Parent=LTnewLM_360023400.1 ### LTnewLM_36 . polypeptide 674553 677186 . - . ID=LTnewLM_360023400.1:pep;Derives_from=LTnewLM_360023400.1;orthologous_to=LmjF.36.1660_mRNA;ortholog_cluster=OG0006270;product=term%3DS4 domain/RNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01479|Pfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_36 Pfam protein_match 675507 675758 . - . Parent=LTnewLM_360023400.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 LTnewLM_36 Pfam protein_match 675810 675920 . - . Parent=LTnewLM_360023400.1:pep;Name=PF01479;signature_desc=S4 domain;Ontology_term=GO:0003723 ### LTnewLM_36 AUGUSTUS gene 677961 679598 1 - . ID=LTnewLM_360023500 LTnewLM_36 AUGUSTUS mRNA 677961 679598 1 - . ID=LTnewLM_360023500.1;Parent=LTnewLM_360023500 LTnewLM_36 AUGUSTUS CDS 677961 679598 1 - 0 ID=LTnewLM_360023500.1:CDS:1;Parent=LTnewLM_360023500.1 ### LTnewLM_36 . polypeptide 677961 679598 . - . ID=LTnewLM_360023500.1:pep;Derives_from=LTnewLM_360023500.1;orthologous_to=LmjF.36.1670_mRNA;ortholog_cluster=OG0006271;product=term%3DPotential Queuosine%2C Q%2C salvage protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10343 LTnewLM_36 Pfam protein_match 677967 678365 . - . Parent=LTnewLM_360023500.1:pep;Name=PF10343;signature_desc=Potential Queuosine%2C Q%2C salvage protein family ### LTnewLM_36 Liftoff gene 680301 683150 . - . ID=LTnewLM_360023600;coverage=1.0;sequence_ID=0.920;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.1680_0 LTnewLM_36 Liftoff mRNA 680301 683150 . - . ID=LTnewLM_360023600.1;Parent=LTnewLM_360023600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 680301 683150 . - 0 ID=LTnewLM_360023600.1:CDS:1;Parent=LTnewLM_360023600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 680301 683150 . - . ID=LTnewLM_360023600.1:pep;Derives_from=LTnewLM_360023600.1;orthologous_to=LmjF.36.1680_mRNA;ortholog_cluster=OG0006272;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 683763 684695 1 - . ID=LTnewLM_360023700 LTnewLM_36 AUGUSTUS mRNA 683763 684695 1 - . ID=LTnewLM_360023700.1;Parent=LTnewLM_360023700 LTnewLM_36 AUGUSTUS CDS 683763 684695 1 - 0 ID=LTnewLM_360023700.1:CDS:1;Parent=LTnewLM_360023700.1 ### LTnewLM_36 . polypeptide 683763 684695 . - . ID=LTnewLM_360023700.1:pep;Derives_from=LTnewLM_360023700.1;orthologous_to=LmjF.36.1690_mRNA;ortholog_cluster=OG0006273;product=term%3DPeptidase M76 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09768;Ontology_term=GO:0004222 LTnewLM_36 Pfam protein_match 683832 684572 . - . Parent=LTnewLM_360023700.1:pep;Name=PF09768;signature_desc=Peptidase M76 family;Ontology_term=GO:0004222 ### LTnewLM_36 AUGUSTUS gene 687408 689048 1 - . ID=LTnewLM_360023800 LTnewLM_36 AUGUSTUS mRNA 687408 689048 1 - . ID=LTnewLM_360023800.1;Parent=LTnewLM_360023800 LTnewLM_36 AUGUSTUS CDS 687408 689048 1 - 0 ID=LTnewLM_360023800.1:CDS:1;Parent=LTnewLM_360023800.1 ### LTnewLM_36 . polypeptide 687408 689048 . - . ID=LTnewLM_360023800.1:pep;Derives_from=LTnewLM_360023800.1;orthologous_to=LmjF.36.1700_mRNA;ortholog_cluster=OG0006274;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 690820 691983 1 - . ID=LTnewLM_360023900 LTnewLM_36 AUGUSTUS mRNA 690820 691983 1 - . ID=LTnewLM_360023900.1;Parent=LTnewLM_360023900 LTnewLM_36 AUGUSTUS CDS 690820 691983 1 - 0 ID=LTnewLM_360023900.1:CDS:1;Parent=LTnewLM_360023900.1 ### LTnewLM_36 . polypeptide 690820 691983 . - . ID=LTnewLM_360023900.1:pep;Derives_from=LTnewLM_360023900.1;orthologous_to=LmjF.36.1710_mRNA;ortholog_cluster=OG0006275;product=term%3DPhosphatidylinositol N-acetylglucosaminyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06432;Ontology_term=GO:0006506,GO:0016021,GO:0017176 LTnewLM_36 Pfam protein_match 690886 691773 . - . Parent=LTnewLM_360023900.1:pep;Name=PF06432;signature_desc=Phosphatidylinositol N-acetylglucosaminyltransferase;Ontology_term=GO:0017176,GO:0006506,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 693015 706115 1 - . ID=LTnewLM_360024000 LTnewLM_36 AUGUSTUS mRNA 693015 706115 1 - . ID=LTnewLM_360024000.1;Parent=LTnewLM_360024000 LTnewLM_36 AUGUSTUS CDS 693015 706115 1 - 0 ID=LTnewLM_360024000.1:CDS:1;Parent=LTnewLM_360024000.1 ### LTnewLM_36 . polypeptide 693015 706115 . - . ID=LTnewLM_360024000.1:pep;Derives_from=LTnewLM_360024000.1;orthologous_to=LmjF.36.1720_mRNA;ortholog_cluster=OG0006276;product=term%3DNeurobeachin/BDCP%2C DUF4704 alpha solenoid region/PH domain associated with Beige/BEACH/Beige/BEACH domain/Neurobeachin beta propeller domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15787|Pfam:PF14844|Pfam:PF02138|Pfam:PF20426 LTnewLM_36 Pfam protein_match 693291 693839 . - . Parent=LTnewLM_360024000.1:pep;Name=PF20426;signature_desc=Neurobeachin beta propeller domain LTnewLM_36 Pfam protein_match 694371 695198 . - . Parent=LTnewLM_360024000.1:pep;Name=PF02138;signature_desc=Beige/BEACH domain LTnewLM_36 Pfam protein_match 695385 695681 . - . Parent=LTnewLM_360024000.1:pep;Name=PF14844;signature_desc=PH domain associated with Beige/BEACH LTnewLM_36 Pfam protein_match 698322 698885 . - . Parent=LTnewLM_360024000.1:pep;Name=PF15787;signature_desc=Neurobeachin/BDCP%2C DUF4704 alpha solenoid region ### LTnewLM_36 AUGUSTUS gene 708243 711098 1 - . ID=LTnewLM_360024100 LTnewLM_36 AUGUSTUS mRNA 708243 711098 1 - . ID=LTnewLM_360024100.1;Parent=LTnewLM_360024100 LTnewLM_36 AUGUSTUS CDS 708243 711098 1 - 0 ID=LTnewLM_360024100.1:CDS:1;Parent=LTnewLM_360024100.1 ### LTnewLM_36 . polypeptide 708243 711098 . - . ID=LTnewLM_360024100.1:pep;Derives_from=LTnewLM_360024100.1;orthologous_to=LmjF.36.1730_mRNA;ortholog_cluster=OG0006277;product=term%3DSec34-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04136;Ontology_term=GO:0005801,GO:0006886,GO:0016020 LTnewLM_36 Pfam protein_match 710313 710705 . - . Parent=LTnewLM_360024100.1:pep;Name=PF04136;signature_desc=Sec34-like family;Ontology_term=GO:0006886,GO:0005801,GO:0016020 ### LTnewLM_36 AUGUSTUS gene 711935 717439 1 - . ID=LTnewLM_360024200 LTnewLM_36 AUGUSTUS mRNA 711935 717439 1 - . ID=LTnewLM_360024200.1;Parent=LTnewLM_360024200 LTnewLM_36 AUGUSTUS CDS 711935 717439 1 - 0 ID=LTnewLM_360024200.1:CDS:1;Parent=LTnewLM_360024200.1 ### LTnewLM_36 . polypeptide 711935 717439 . - . ID=LTnewLM_360024200.1:pep;Derives_from=LTnewLM_360024200.1;orthologous_to=LmjF.36.1740_mRNA;ortholog_cluster=OG0006278;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 719027 720661 1 - . ID=LTnewLM_360024300 LTnewLM_36 AUGUSTUS mRNA 719027 720661 1 - . ID=LTnewLM_360024300.1;Parent=LTnewLM_360024300 LTnewLM_36 AUGUSTUS CDS 719027 720661 1 - 0 ID=LTnewLM_360024300.1:CDS:1;Parent=LTnewLM_360024300.1 ### LTnewLM_36 . polypeptide 719027 720661 . - . ID=LTnewLM_360024300.1:pep;Derives_from=LTnewLM_360024300.1;orthologous_to=LmjF.36.1750_mRNA;ortholog_cluster=OG0006279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 721971 723500 1 - . ID=LTnewLM_360024400 LTnewLM_36 AUGUSTUS mRNA 721971 723500 1 - . ID=LTnewLM_360024400.1;Parent=LTnewLM_360024400 LTnewLM_36 AUGUSTUS CDS 721971 723500 1 - 0 ID=LTnewLM_360024400.1:CDS:1;Parent=LTnewLM_360024400.1 ### LTnewLM_36 . polypeptide 721971 723500 . - . ID=LTnewLM_360024400.1:pep;Derives_from=LTnewLM_360024400.1;orthologous_to=LmjF.36.1760_mRNA;ortholog_cluster=OG0006280;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_36 Pfam protein_match 721992 723374 . - . Parent=LTnewLM_360024400.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 725853 726173 1 - . ID=LTnewLM_360024500 LTnewLM_36 AUGUSTUS mRNA 725853 726173 1 - . ID=LTnewLM_360024500.1;Parent=LTnewLM_360024500 LTnewLM_36 AUGUSTUS CDS 725853 726173 1 - 0 ID=LTnewLM_360024500.1:CDS:1;Parent=LTnewLM_360024500.1 ### LTnewLM_36 . polypeptide 725853 726173 . - . ID=LTnewLM_360024500.1:pep;Derives_from=LTnewLM_360024500.1;orthologous_to=LmjF.36.1770_mRNA;ortholog_cluster=OG0006281;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 727179 729416 1 - . ID=LTnewLM_360024600 LTnewLM_36 AUGUSTUS mRNA 727179 729416 1 - . ID=LTnewLM_360024600.1;Parent=LTnewLM_360024600 LTnewLM_36 AUGUSTUS CDS 727179 729416 1 - 0 ID=LTnewLM_360024600.1:CDS:1;Parent=LTnewLM_360024600.1 ### LTnewLM_36 . polypeptide 727179 729416 . - . ID=LTnewLM_360024600.1:pep;Derives_from=LTnewLM_360024600.1;orthologous_to=LmjF.36.1780_mRNA;ortholog_cluster=OG0006282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 730538 733225 1 - . ID=LTnewLM_360024700 LTnewLM_36 AUGUSTUS mRNA 730538 733225 1 - . ID=LTnewLM_360024700.1;Parent=LTnewLM_360024700 LTnewLM_36 AUGUSTUS CDS 730538 733225 1 - 0 ID=LTnewLM_360024700.1:CDS:1;Parent=LTnewLM_360024700.1 ### LTnewLM_36 . polypeptide 730538 733225 . - . ID=LTnewLM_360024700.1:pep;Derives_from=LTnewLM_360024700.1;orthologous_to=LmjF.36.1790_mRNA;ortholog_cluster=OG0006283;product=term%3DXRN 5'-3' exonuclease N-terminus/Xrn1 helical domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159|Pfam:PF17846;Ontology_term=GO:0003676,GO:0004527 LTnewLM_36 Pfam protein_match 731438 732373 . - . Parent=LTnewLM_360024700.1:pep;Name=PF17846;signature_desc=Xrn1 helical domain LTnewLM_36 Pfam protein_match 732479 733225 . - . Parent=LTnewLM_360024700.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 ### LTnewLM_36 AUGUSTUS gene 734435 735595 1 - . ID=LTnewLM_360024800 LTnewLM_36 AUGUSTUS mRNA 734435 735595 1 - . ID=LTnewLM_360024800.1;Parent=LTnewLM_360024800 LTnewLM_36 AUGUSTUS CDS 734435 735595 1 - 0 ID=LTnewLM_360024800.1:CDS:1;Parent=LTnewLM_360024800.1 ### LTnewLM_36 . polypeptide 734435 735595 . - . ID=LTnewLM_360024800.1:pep;Derives_from=LTnewLM_360024800.1;orthologous_to=LmjF.36.1800_mRNA;ortholog_cluster=OG0006284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 736715 739531 1 - . ID=LTnewLM_360024900 LTnewLM_36 AUGUSTUS mRNA 736715 739531 1 - . ID=LTnewLM_360024900.1;Parent=LTnewLM_360024900 LTnewLM_36 AUGUSTUS CDS 736715 739531 1 - 0 ID=LTnewLM_360024900.1:CDS:1;Parent=LTnewLM_360024900.1 ### LTnewLM_36 . polypeptide 736715 739531 . - . ID=LTnewLM_360024900.1:pep;Derives_from=LTnewLM_360024900.1;orthologous_to=LmjF.36.1810_mRNA;ortholog_cluster=OG0006285;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_36 Pfam protein_match 736760 736825 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 736907 736969 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 736973 737038 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737153 737218 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737306 737362 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737393 737434 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737441 737500 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737567 737614 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737696 737752 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737768 737818 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 737978 738040 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 738074 738112 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 738122 738181 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 738197 738247 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 738809 738862 . - . Parent=LTnewLM_360024900.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_36 AUGUSTUS gene 742243 744864 1 - . ID=LTnewLM_360025000 LTnewLM_36 AUGUSTUS mRNA 742243 744864 1 - . ID=LTnewLM_360025000.1;Parent=LTnewLM_360025000 LTnewLM_36 AUGUSTUS CDS 742243 744864 1 - 0 ID=LTnewLM_360025000.1:CDS:1;Parent=LTnewLM_360025000.1 ### LTnewLM_36 . polypeptide 742243 744864 . - . ID=LTnewLM_360025000.1:pep;Derives_from=LTnewLM_360025000.1;orthologous_to=LmjF.36.1820_mRNA;ortholog_cluster=OG0006286;product=term%3DRas of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_36 Pfam protein_match 744406 744804 . - . Parent=LTnewLM_360025000.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_36 Pfam protein_match 744505 744804 . - . Parent=LTnewLM_360025000.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_36 AUGUSTUS gene 748641 751274 1 - . ID=LTnewLM_360025100 LTnewLM_36 AUGUSTUS mRNA 748641 751274 1 - . ID=LTnewLM_360025100.1;Parent=LTnewLM_360025100 LTnewLM_36 AUGUSTUS CDS 748641 751274 1 - 0 ID=LTnewLM_360025100.1:CDS:1;Parent=LTnewLM_360025100.1 ### LTnewLM_36 . polypeptide 748641 751274 . - . ID=LTnewLM_360025100.1:pep;Derives_from=LTnewLM_360025100.1;orthologous_to=LmjF.36.1830_mRNA;ortholog_cluster=OG0006287;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 753042 755018 1 - . ID=LTnewLM_360025200 LTnewLM_36 AUGUSTUS mRNA 753042 755018 1 - . ID=LTnewLM_360025200.1;Parent=LTnewLM_360025200 LTnewLM_36 AUGUSTUS CDS 753042 755018 1 - 0 ID=LTnewLM_360025200.1:CDS:1;Parent=LTnewLM_360025200.1 ### LTnewLM_36 . polypeptide 753042 755018 . - . ID=LTnewLM_360025200.1:pep;Derives_from=LTnewLM_360025200.1;orthologous_to=LmjF.36.1840_mRNA;ortholog_cluster=OG0006288;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Domain of unknown function (DUF4217)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF13959;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 753198 753374 . - . Parent=LTnewLM_360025200.1:pep;Name=PF13959;signature_desc=Domain of unknown function (DUF4217) LTnewLM_36 Pfam protein_match 753501 753821 . - . Parent=LTnewLM_360025200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 753942 754457 . - . Parent=LTnewLM_360025200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_36 AUGUSTUS gene 756201 757784 1 - . ID=LTnewLM_360025300 LTnewLM_36 AUGUSTUS mRNA 756201 757784 1 - . ID=LTnewLM_360025300.1;Parent=LTnewLM_360025300 LTnewLM_36 AUGUSTUS CDS 756201 757784 1 - 0 ID=LTnewLM_360025300.1:CDS:1;Parent=LTnewLM_360025300.1 ### LTnewLM_36 . polypeptide 756201 757784 . - . ID=LTnewLM_360025300.1:pep;Derives_from=LTnewLM_360025300.1;orthologous_to=LmjF.36.1850_mRNA;ortholog_cluster=OG0006289;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 756621 756929 . - . Parent=LTnewLM_360025300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 757053 757556 . - . Parent=LTnewLM_360025300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 757071 757508 . - . Parent=LTnewLM_360025300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_36 AUGUSTUS gene 758656 759951 1 - . ID=LTnewLM_360025400 LTnewLM_36 AUGUSTUS mRNA 758656 759951 1 - . ID=LTnewLM_360025400.1;Parent=LTnewLM_360025400 LTnewLM_36 AUGUSTUS CDS 758656 759951 1 - 0 ID=LTnewLM_360025400.1:CDS:1;Parent=LTnewLM_360025400.1 ### LTnewLM_36 . polypeptide 758656 759951 . - . ID=LTnewLM_360025400.1:pep;Derives_from=LTnewLM_360025400.1;orthologous_to=LmjF.36.1860_mRNA;ortholog_cluster=OG0006290;product=term%3DRibosomal protein S5%2C N-terminal domain/Ribosomal protein S5%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00333|Pfam:PF03719;Ontology_term=GO:0003723,GO:0006412,GO:0003735,GO:0005840 LTnewLM_36 Pfam protein_match 759088 759297 . - . Parent=LTnewLM_360025400.1:pep;Name=PF03719;signature_desc=Ribosomal protein S5%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_36 Pfam protein_match 759343 759507 . - . Parent=LTnewLM_360025400.1:pep;Name=PF00333;signature_desc=Ribosomal protein S5%2C N-terminal domain;Ontology_term=GO:0003723,GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 761607 764237 1 - . ID=LTnewLM_360025500 LTnewLM_36 AUGUSTUS mRNA 761607 764237 1 - . ID=LTnewLM_360025500.1;Parent=LTnewLM_360025500 LTnewLM_36 AUGUSTUS CDS 761607 764237 1 - 0 ID=LTnewLM_360025500.1:CDS:1;Parent=LTnewLM_360025500.1 ### LTnewLM_36 . polypeptide 761607 764237 . - . ID=LTnewLM_360025500.1:pep;Derives_from=LTnewLM_360025500.1;orthologous_to=LmjF.36.1870_mRNA;ortholog_cluster=OG0006291;product=term%3DMajor Vault Protein repeat domain/Major Vault Protein Repeat domain/Shoulder domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17794|Pfam:PF01505|Pfam:PF17796|Pfam:PF17795|Pfam:PF11978 LTnewLM_36 Pfam protein_match 762228 762581 . - . Parent=LTnewLM_360025500.1:pep;Name=PF11978;signature_desc=Shoulder domain LTnewLM_36 Pfam protein_match 762585 762794 . - . Parent=LTnewLM_360025500.1:pep;Name=PF17795;signature_desc=Major Vault Protein Repeat domain LTnewLM_36 Pfam protein_match 762873 763019 . - . Parent=LTnewLM_360025500.1:pep;Name=PF17796;signature_desc=Major Vault Protein repeat domain LTnewLM_36 Pfam protein_match 763086 763214 . - . Parent=LTnewLM_360025500.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_36 Pfam protein_match 763746 763895 . - . Parent=LTnewLM_360025500.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_36 Pfam protein_match 763914 764093 . - . Parent=LTnewLM_360025500.1:pep;Name=PF17794;signature_desc=Major Vault Protein repeat domain ### LTnewLM_36 AUGUSTUS gene 765766 767667 1 - . ID=LTnewLM_360025600 LTnewLM_36 AUGUSTUS mRNA 765766 767667 1 - . ID=LTnewLM_360025600.1;Parent=LTnewLM_360025600 LTnewLM_36 AUGUSTUS CDS 765766 767667 1 - 0 ID=LTnewLM_360025600.1:CDS:1;Parent=LTnewLM_360025600.1 ### LTnewLM_36 . polypeptide 765766 767667 . - . ID=LTnewLM_360025600.1:pep;Derives_from=LTnewLM_360025600.1;orthologous_to=LmjF.36.1880_mRNA;ortholog_cluster=OG0006292;product=term%3DCBF/Mak21 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03914 LTnewLM_36 Pfam protein_match 765988 766650 . - . Parent=LTnewLM_360025600.1:pep;Name=PF03914;signature_desc=CBF/Mak21 family ### LTnewLM_36 AUGUSTUS gene 768834 769373 1 - . ID=LTnewLM_360025700 LTnewLM_36 AUGUSTUS mRNA 768834 769373 1 - . ID=LTnewLM_360025700.1;Parent=LTnewLM_360025700 LTnewLM_36 AUGUSTUS CDS 768834 769373 1 - 0 ID=LTnewLM_360025700.1:CDS:1;Parent=LTnewLM_360025700.1 ### LTnewLM_36 . polypeptide 768834 769373 . - . ID=LTnewLM_360025700.1:pep;Derives_from=LTnewLM_360025700.1;orthologous_to=LmjF.36.1890_mRNA;ortholog_cluster=OG0006293;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 770881 775848 1 - . ID=LTnewLM_360025800 LTnewLM_36 AUGUSTUS mRNA 770881 775848 1 - . ID=LTnewLM_360025800.1;Parent=LTnewLM_360025800 LTnewLM_36 AUGUSTUS CDS 770881 775848 1 - 0 ID=LTnewLM_360025800.1:CDS:1;Parent=LTnewLM_360025800.1 ### LTnewLM_36 . polypeptide 770881 775848 . - . ID=LTnewLM_360025800.1:pep;Derives_from=LTnewLM_360025800.1;orthologous_to=LmjF.36.1900_mRNA;ortholog_cluster=OG0006294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 777194 778438 1 - . ID=LTnewLM_360025900 LTnewLM_36 AUGUSTUS mRNA 777194 778438 1 - . ID=LTnewLM_360025900.1;Parent=LTnewLM_360025900 LTnewLM_36 AUGUSTUS CDS 777194 778438 1 - 0 ID=LTnewLM_360025900.1:CDS:1;Parent=LTnewLM_360025900.1 ### LTnewLM_36 . polypeptide 777194 778438 . - . ID=LTnewLM_360025900.1:pep;Derives_from=LTnewLM_360025900.1;orthologous_to=LmjF.36.1905_mRNA;ortholog_cluster=OG0006295;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 779456 780835 1 - . ID=LTnewLM_360026000 LTnewLM_36 AUGUSTUS mRNA 779456 780835 1 - . ID=LTnewLM_360026000.1;Parent=LTnewLM_360026000 LTnewLM_36 AUGUSTUS CDS 779456 780835 1 - 0 ID=LTnewLM_360026000.1:CDS:1;Parent=LTnewLM_360026000.1 ### LTnewLM_36 . polypeptide 779456 780835 . - . ID=LTnewLM_360026000.1:pep;Derives_from=LTnewLM_360026000.1;orthologous_to=LmjF.36.1910_mRNA;ortholog_cluster=OG0006296;product=term%3DGrowth-arrest specific micro-tubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13851;Ontology_term=GO:0048870,GO:0031514 LTnewLM_36 Pfam protein_match 779576 780169 . - . Parent=LTnewLM_360026000.1:pep;Name=PF13851;signature_desc=Growth-arrest specific micro-tubule binding;Ontology_term=GO:0048870,GO:0031514 ### LTnewLM_36 AUGUSTUS gene 781925 783415 1 - . ID=LTnewLM_360026100 LTnewLM_36 AUGUSTUS mRNA 781925 783415 1 - . ID=LTnewLM_360026100.1;Parent=LTnewLM_360026100 LTnewLM_36 AUGUSTUS CDS 781925 783415 1 - 0 ID=LTnewLM_360026100.1:CDS:1;Parent=LTnewLM_360026100.1 ### LTnewLM_36 . polypeptide 781925 783415 . - . ID=LTnewLM_360026100.1:pep;Derives_from=LTnewLM_360026100.1;orthologous_to=LmjF.36.1920_mRNA;ortholog_cluster=OG0006297;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 784883 785161 1 - . ID=LTnewLM_360026200 LTnewLM_36 AUGUSTUS mRNA 784883 785161 1 - . ID=LTnewLM_360026200.1;Parent=LTnewLM_360026200 LTnewLM_36 AUGUSTUS CDS 784883 785161 1 - 0 ID=LTnewLM_360026200.1:CDS:1;Parent=LTnewLM_360026200.1 ### LTnewLM_36 . polypeptide 784883 785161 . - . ID=LTnewLM_360026200.1:pep;Derives_from=LTnewLM_360026200.1;orthologous_to=LTnewLM_210027900.1,LmjF.21.1820_mRNA,LmjF.36.1925_mRNA;ortholog_cluster=OG0000158;product=term%3DRibosomal L37ae protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01780;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 784901 785152 . - . Parent=LTnewLM_360026200.1:pep;Name=PF01780;signature_desc=Ribosomal L37ae protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 787649 788551 1 - . ID=LTnewLM_360026300 LTnewLM_36 AUGUSTUS mRNA 787649 788551 1 - . ID=LTnewLM_360026300.1;Parent=LTnewLM_360026300 LTnewLM_36 AUGUSTUS CDS 787649 788551 1 - 0 ID=LTnewLM_360026300.1:CDS:1;Parent=LTnewLM_360026300.1 ### LTnewLM_36 . polypeptide 787649 788551 . - . ID=LTnewLM_360026300.1:pep;Derives_from=LTnewLM_360026300.1;orthologous_to=LmjF.36.1930_mRNA;ortholog_cluster=OG0006298;product=term%3DZinc finger%2C C3HC4 type (RING finger)/Ring finger domain/RING-type zinc-finger/zinc-RING finger domain/Prokaryotic RING finger family 4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13639|Pfam:PF13445|Pfam:PF00097|Pfam:PF13923|Pfam:PF14634|Pfam:PF14447;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_36 Pfam protein_match 788378 788515 . - . Parent=LTnewLM_360026300.1:pep;Name=PF14447;signature_desc=Prokaryotic RING finger family 4 LTnewLM_36 Pfam protein_match 788381 788521 . - . Parent=LTnewLM_360026300.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_36 Pfam protein_match 788393 788515 . - . Parent=LTnewLM_360026300.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_36 Pfam protein_match 788393 788518 . - . Parent=LTnewLM_360026300.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_36 Pfam protein_match 788396 788515 . - . Parent=LTnewLM_360026300.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_36 Pfam protein_match 788396 788515 . - . Parent=LTnewLM_360026300.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_36 Pfam protein_match 788402 788515 . - . Parent=LTnewLM_360026300.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger ### LTnewLM_36 AUGUSTUS gene 790354 790683 1 - . ID=LTnewLM_360026400 LTnewLM_36 AUGUSTUS mRNA 790354 790683 1 - . ID=LTnewLM_360026400.1;Parent=LTnewLM_360026400 LTnewLM_36 AUGUSTUS CDS 790354 790683 1 - 0 ID=LTnewLM_360026400.1:CDS:1;Parent=LTnewLM_360026400.1 ### LTnewLM_36 . polypeptide 790354 790683 . - . ID=LTnewLM_360026400.1:pep;Derives_from=LTnewLM_360026400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 792541 794040 1 - . ID=LTnewLM_360026500 LTnewLM_36 AUGUSTUS mRNA 792541 794040 1 - . ID=LTnewLM_360026500.1;Parent=LTnewLM_360026500 LTnewLM_36 AUGUSTUS CDS 792541 794040 1 - 0 ID=LTnewLM_360026500.1:CDS:1;Parent=LTnewLM_360026500.1 ### LTnewLM_36 . polypeptide 792541 794040 . - . ID=LTnewLM_360026500.1:pep;Derives_from=LTnewLM_360026500.1;orthologous_to=LmjF.36.1940_mRNA;ortholog_cluster=OG0006299;product=term%3DNucleoside transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01733;Ontology_term=GO:0006810,GO:0016021,GO:0005337 LTnewLM_36 Pfam protein_match 792559 793602 . - . Parent=LTnewLM_360026500.1:pep;Name=PF01733;signature_desc=Nucleoside transporter;Ontology_term=GO:0005337,GO:0006810,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 795069 798113 1 - . ID=LTnewLM_360026600 LTnewLM_36 AUGUSTUS mRNA 795069 798113 1 - . ID=LTnewLM_360026600.1;Parent=LTnewLM_360026600 LTnewLM_36 AUGUSTUS CDS 795069 798113 1 - 0 ID=LTnewLM_360026600.1:CDS:1;Parent=LTnewLM_360026600.1 ### LTnewLM_36 . polypeptide 795069 798113 . - . ID=LTnewLM_360026600.1:pep;Derives_from=LTnewLM_360026600.1;orthologous_to=LmjF.36.1950_mRNA;ortholog_cluster=OG0006300;product=term%3DMutS domain I/MutS domain III/MutS domain V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01624|Pfam:PF05192|Pfam:PF00488;Ontology_term=GO:0030983,GO:0006298,GO:0005524 LTnewLM_36 Pfam protein_match 795132 795794 . - . Parent=LTnewLM_360026600.1:pep;Name=PF00488;signature_desc=MutS domain V;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_36 Pfam protein_match 795963 796982 . - . Parent=LTnewLM_360026600.1:pep;Name=PF05192;signature_desc=MutS domain III;Ontology_term=GO:0005524,GO:0030983,GO:0006298 LTnewLM_36 Pfam protein_match 797646 797981 . - . Parent=LTnewLM_360026600.1:pep;Name=PF01624;signature_desc=MutS domain I;Ontology_term=GO:0005524,GO:0030983,GO:0006298 ### LTnewLM_36 AUGUSTUS gene 799710 800672 0.9 - . ID=LTnewLM_360026700 LTnewLM_36 AUGUSTUS mRNA 799710 800672 0.66 - . ID=LTnewLM_360026700.1;Parent=LTnewLM_360026700 LTnewLM_36 AUGUSTUS CDS 799710 800672 0.66 - 0 ID=LTnewLM_360026700.1:CDS:1;Parent=LTnewLM_360026700.1 LTnewLM_36 AUGUSTUS mRNA 799816 800672 0.24 - . ID=LTnewLM_360026700.2;Parent=LTnewLM_360026700 LTnewLM_36 AUGUSTUS CDS 799816 799824 0.66 - 0 ID=LTnewLM_360026700.2:CDS:1;Parent=LTnewLM_360026700.2 LTnewLM_36 AUGUSTUS CDS 799884 800672 0.3 - 0 ID=LTnewLM_360026700.2:CDS:2;Parent=LTnewLM_360026700.2 ### LTnewLM_36 . polypeptide 799710 800672 . - . ID=LTnewLM_360026700.1:pep;Derives_from=LTnewLM_360026700.1;orthologous_to=LTnewLM_360026700.2,LmjF.36.1955_mRNA;ortholog_cluster=OG0000478;product=term%3DTLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07534 LTnewLM_36 Pfam protein_match 799869 800429 . - . Parent=LTnewLM_360026700.1:pep;Name=PF07534;signature_desc=TLD ### LTnewLM_36 . polypeptide 799816 800672 . - . ID=LTnewLM_360026700.2:pep;Derives_from=LTnewLM_360026700.2;orthologous_to=LTnewLM_360026700.1,LmjF.36.1955_mRNA;ortholog_cluster=OG0000478;product=term%3DTLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07534 LTnewLM_36 Pfam protein_match 799911 800429 . - . Parent=LTnewLM_360026700.2:pep;Name=PF07534;signature_desc=TLD ### LTnewLM_36 AUGUSTUS gene 801878 802621 1 + . ID=LTnewLM_360026800 LTnewLM_36 AUGUSTUS mRNA 801878 802621 1 + . ID=LTnewLM_360026800.1;Parent=LTnewLM_360026800 LTnewLM_36 AUGUSTUS CDS 801878 802621 1 + 0 ID=LTnewLM_360026800.1:CDS:1;Parent=LTnewLM_360026800.1 ### LTnewLM_36 . polypeptide 801878 802621 . + . ID=LTnewLM_360026800.1:pep;Derives_from=LTnewLM_360026800.1;orthologous_to=LmjF.36.1960_mRNA;ortholog_cluster=OG0006301;product=term%3Dhaloacid dehalogenase-like hydrolase/Eukaryotic phosphomannomutase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08282|Pfam:PF03332;Ontology_term=GO:0005737,GO:0019307,GO:0004615 LTnewLM_36 Pfam protein_match 801899 802474 . + . Parent=LTnewLM_360026800.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_36 Pfam protein_match 801953 802606 . + . Parent=LTnewLM_360026800.1:pep;Name=PF03332;signature_desc=Eukaryotic phosphomannomutase;Ontology_term=GO:0004615,GO:0019307,GO:0005737 ### LTnewLM_36 AUGUSTUS gene 803232 804125 1 + . ID=LTnewLM_360026900 LTnewLM_36 AUGUSTUS mRNA 803232 804125 1 + . ID=LTnewLM_360026900.1;Parent=LTnewLM_360026900 LTnewLM_36 AUGUSTUS CDS 803232 804125 1 + 0 ID=LTnewLM_360026900.1:CDS:1;Parent=LTnewLM_360026900.1 ### LTnewLM_36 . polypeptide 803232 804125 . + . ID=LTnewLM_360026900.1:pep;Derives_from=LTnewLM_360026900.1;orthologous_to=LmjF.36.1970_mRNA;ortholog_cluster=OG0006302;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 804508 805731 1 + . ID=LTnewLM_360027000 LTnewLM_36 AUGUSTUS mRNA 804508 805731 1 + . ID=LTnewLM_360027000.1;Parent=LTnewLM_360027000 LTnewLM_36 AUGUSTUS CDS 804508 805731 1 + 0 ID=LTnewLM_360027000.1:CDS:1;Parent=LTnewLM_360027000.1 ### LTnewLM_36 . polypeptide 804508 805731 . + . ID=LTnewLM_360027000.1:pep;Derives_from=LTnewLM_360027000.1;orthologous_to=LmjF.36.1980_mRNA;ortholog_cluster=OG0006303;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 804730 805386 . + . Parent=LTnewLM_360027000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 806331 806630 1 + . ID=LTnewLM_360027100 LTnewLM_36 AUGUSTUS mRNA 806331 806630 1 + . ID=LTnewLM_360027100.1;Parent=LTnewLM_360027100 LTnewLM_36 AUGUSTUS CDS 806331 806630 1 + 0 ID=LTnewLM_360027100.1:CDS:1;Parent=LTnewLM_360027100.1 ### LTnewLM_36 . polypeptide 806331 806630 . + . ID=LTnewLM_360027100.1:pep;Derives_from=LTnewLM_360027100.1;orthologous_to=LmjF.36.1990_mRNA;ortholog_cluster=OG0006304;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 807409 807624 1 + . ID=LTnewLM_360027200 LTnewLM_36 AUGUSTUS mRNA 807409 807624 1 + . ID=LTnewLM_360027200.1;Parent=LTnewLM_360027200 LTnewLM_36 AUGUSTUS CDS 807409 807624 1 + 0 ID=LTnewLM_360027200.1:CDS:1;Parent=LTnewLM_360027200.1 ### LTnewLM_36 . polypeptide 807409 807624 . + . ID=LTnewLM_360027200.1:pep;Derives_from=LTnewLM_360027200.1;product=term%3DMethylenetetrahydrofolate reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02219;Ontology_term=GO:0004489,GO:0006555,GO:0055114 LTnewLM_36 Pfam protein_match 807430 807615 . + . Parent=LTnewLM_360027200.1:pep;Name=PF02219;signature_desc=Methylenetetrahydrofolate reductase;Ontology_term=GO:0004489,GO:0006555,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 807976 808404 1 + . ID=LTnewLM_360027300 LTnewLM_36 AUGUSTUS mRNA 807976 808404 1 + . ID=LTnewLM_360027300.1;Parent=LTnewLM_360027300 LTnewLM_36 AUGUSTUS CDS 807976 808404 1 + 0 ID=LTnewLM_360027300.1:CDS:1;Parent=LTnewLM_360027300.1 ### LTnewLM_36 . polypeptide 807976 808404 . + . ID=LTnewLM_360027300.1:pep;Derives_from=LTnewLM_360027300.1;product=term%3DMethylenetetrahydrofolate reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02219;Ontology_term=GO:0004489,GO:0006555,GO:0055114 LTnewLM_36 Pfam protein_match 807982 808194 . + . Parent=LTnewLM_360027300.1:pep;Name=PF02219;signature_desc=Methylenetetrahydrofolate reductase;Ontology_term=GO:0004489,GO:0006555,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 808539 808931 1 + . ID=LTnewLM_360027400 LTnewLM_36 AUGUSTUS mRNA 808539 808931 1 + . ID=LTnewLM_360027400.1;Parent=LTnewLM_360027400 LTnewLM_36 AUGUSTUS CDS 808539 808931 1 + 0 ID=LTnewLM_360027400.1:CDS:1;Parent=LTnewLM_360027400.1 ### LTnewLM_36 . polypeptide 808539 808931 . + . ID=LTnewLM_360027400.1:pep;Derives_from=LTnewLM_360027400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 809299 809562 1 + . ID=LTnewLM_360027500 LTnewLM_36 AUGUSTUS mRNA 809299 809562 1 + . ID=LTnewLM_360027500.1;Parent=LTnewLM_360027500 LTnewLM_36 AUGUSTUS CDS 809299 809562 1 + 0 ID=LTnewLM_360027500.1:CDS:1;Parent=LTnewLM_360027500.1 ### LTnewLM_36 . polypeptide 809299 809562 . + . ID=LTnewLM_360027500.1:pep;Derives_from=LTnewLM_360027500.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 810945 814784 1 + . ID=LTnewLM_360027600 LTnewLM_36 AUGUSTUS mRNA 810945 814784 1 + . ID=LTnewLM_360027600.1;Parent=LTnewLM_360027600 LTnewLM_36 AUGUSTUS CDS 810945 814784 1 + 0 ID=LTnewLM_360027600.1:CDS:1;Parent=LTnewLM_360027600.1 ### LTnewLM_36 . polypeptide 810945 814784 . + . ID=LTnewLM_360027600.1:pep;Derives_from=LTnewLM_360027600.1;orthologous_to=LmjF.36.2000_mRNA;ortholog_cluster=OG0006305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 815549 816967 1 + . ID=LTnewLM_360027700 LTnewLM_36 AUGUSTUS mRNA 815549 816967 1 + . ID=LTnewLM_360027700.1;Parent=LTnewLM_360027700 LTnewLM_36 AUGUSTUS CDS 815549 816967 1 + 0 ID=LTnewLM_360027700.1:CDS:1;Parent=LTnewLM_360027700.1 ### LTnewLM_36 . polypeptide 815549 816967 . + . ID=LTnewLM_360027700.1:pep;Derives_from=LTnewLM_360027700.1;orthologous_to=LmjF.36.2010_mRNA;ortholog_cluster=OG0006306;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 817565 819265 1 + . ID=LTnewLM_360027800 LTnewLM_36 AUGUSTUS mRNA 817565 819265 1 + . ID=LTnewLM_360027800.1;Parent=LTnewLM_360027800 LTnewLM_36 AUGUSTUS CDS 817565 819265 1 + 0 ID=LTnewLM_360027800.1:CDS:1;Parent=LTnewLM_360027800.1 ### LTnewLM_36 . polypeptide 817565 819265 . + . ID=LTnewLM_360027800.1:pep;Derives_from=LTnewLM_360027800.1;orthologous_to=LTnewLM_000005800.1,LTnewLM_000005900.1,LTnewLM_360027900.1,LmjF.36.2020_mRNA,LmjF.36.2030_mRNA;ortholog_cluster=OG0000072;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 817661 819172 . + . Parent=LTnewLM_360027800.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_36 AUGUSTUS gene 821718 823406 1 + . ID=LTnewLM_360027900 LTnewLM_36 AUGUSTUS mRNA 821718 823406 1 + . ID=LTnewLM_360027900.1;Parent=LTnewLM_360027900 LTnewLM_36 AUGUSTUS CDS 821718 823406 1 + 0 ID=LTnewLM_360027900.1:CDS:1;Parent=LTnewLM_360027900.1 ### LTnewLM_36 . polypeptide 821718 823406 . + . ID=LTnewLM_360027900.1:pep;Derives_from=LTnewLM_360027900.1;orthologous_to=LTnewLM_000005800.1,LTnewLM_000005900.1,LTnewLM_360027800.1,LmjF.36.2020_mRNA,LmjF.36.2030_mRNA;ortholog_cluster=OG0000072;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 821814 823325 . + . Parent=LTnewLM_360027900.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_36 AUGUSTUS gene 827087 829327 1 + . ID=LTnewLM_360028000 LTnewLM_36 AUGUSTUS mRNA 827087 829327 1 + . ID=LTnewLM_360028000.1;Parent=LTnewLM_360028000 LTnewLM_36 AUGUSTUS CDS 827087 829327 1 + 0 ID=LTnewLM_360028000.1:CDS:1;Parent=LTnewLM_360028000.1 ### LTnewLM_36 . polypeptide 827087 829327 . + . ID=LTnewLM_360028000.1:pep;Derives_from=LTnewLM_360028000.1;orthologous_to=LmjF.36.2035_mRNA;ortholog_cluster=OG0006307;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 828149 828238 . + . Parent=LTnewLM_360028000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 831490 832833 1 + . ID=LTnewLM_360028100 LTnewLM_36 AUGUSTUS mRNA 831490 832833 1 + . ID=LTnewLM_360028100.1;Parent=LTnewLM_360028100 LTnewLM_36 AUGUSTUS CDS 831490 832833 1 + 0 ID=LTnewLM_360028100.1:CDS:1;Parent=LTnewLM_360028100.1 ### LTnewLM_36 . polypeptide 831490 832833 . + . ID=LTnewLM_360028100.1:pep;Derives_from=LTnewLM_360028100.1;orthologous_to=LmjF.36.2040_mRNA;ortholog_cluster=OG0006308;product=term%3DALG3 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05208;Ontology_term=GO:0016758,GO:0005783,GO:0016021 LTnewLM_36 Pfam protein_match 831511 832659 . + . Parent=LTnewLM_360028100.1:pep;Name=PF05208;signature_desc=ALG3 protein;Ontology_term=GO:0016758,GO:0005783,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 835728 838472 1 + . ID=LTnewLM_360028200 LTnewLM_36 AUGUSTUS mRNA 835728 838472 1 + . ID=LTnewLM_360028200.1;Parent=LTnewLM_360028200 LTnewLM_36 AUGUSTUS CDS 835728 838472 1 + 0 ID=LTnewLM_360028200.1:CDS:1;Parent=LTnewLM_360028200.1 ### LTnewLM_36 . polypeptide 835728 838472 . + . ID=LTnewLM_360028200.1:pep;Derives_from=LTnewLM_360028200.1;orthologous_to=LmjF.36.2050_mRNA;ortholog_cluster=OG0006309;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 836784 837245 . + . Parent=LTnewLM_360028200.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 839521 841041 1 + . ID=LTnewLM_360028300 LTnewLM_36 AUGUSTUS mRNA 839521 841041 1 + . ID=LTnewLM_360028300.1;Parent=LTnewLM_360028300 LTnewLM_36 AUGUSTUS CDS 839521 841041 1 + 0 ID=LTnewLM_360028300.1:CDS:1;Parent=LTnewLM_360028300.1 ### LTnewLM_36 . polypeptide 839521 841041 . + . ID=LTnewLM_360028300.1:pep;Derives_from=LTnewLM_360028300.1;orthologous_to=LmjF.36.2060_mRNA;ortholog_cluster=OG0006310;product=term%3DProtein of unknown function DUF72%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01904 LTnewLM_36 Pfam protein_match 840052 840717 . + . Parent=LTnewLM_360028300.1:pep;Name=PF01904;signature_desc=Protein of unknown function DUF72 ### LTnewLM_36 AUGUSTUS gene 842435 843427 1 + . ID=LTnewLM_360028400 LTnewLM_36 AUGUSTUS mRNA 842435 843427 1 + . ID=LTnewLM_360028400.1;Parent=LTnewLM_360028400 LTnewLM_36 AUGUSTUS CDS 842435 843427 1 + 0 ID=LTnewLM_360028400.1:CDS:1;Parent=LTnewLM_360028400.1 ### LTnewLM_36 . polypeptide 842435 843427 . + . ID=LTnewLM_360028400.1:pep;Derives_from=LTnewLM_360028400.1;orthologous_to=LmjF.36.2070_mRNA;ortholog_cluster=OG0006311;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07719|Pfam:PF13181;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 842783 842875 . + . Parent=LTnewLM_360028400.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 842783 842878 . + . Parent=LTnewLM_360028400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 848262 852127 0.98 + . ID=LTnewLM_360028500 LTnewLM_36 AUGUSTUS mRNA 848262 852127 0.98 + . ID=LTnewLM_360028500.1;Parent=LTnewLM_360028500 LTnewLM_36 AUGUSTUS CDS 848262 848540 0.98 + 0 ID=LTnewLM_360028500.1:CDS:1;Parent=LTnewLM_360028500.1 LTnewLM_36 AUGUSTUS CDS 848603 852127 0.98 + 0 ID=LTnewLM_360028500.1:CDS:2;Parent=LTnewLM_360028500.1 ### LTnewLM_36 . polypeptide 848262 852127 . + . ID=LTnewLM_360028500.1:pep;Derives_from=LTnewLM_360028500.1;orthologous_to=LmjF.36.2080_mRNA;ortholog_cluster=OG0006312;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 856203 859064 1 + . ID=LTnewLM_360028600 LTnewLM_36 AUGUSTUS mRNA 856203 859064 1 + . ID=LTnewLM_360028600.1;Parent=LTnewLM_360028600 LTnewLM_36 AUGUSTUS CDS 856203 859064 1 + 0 ID=LTnewLM_360028600.1:CDS:1;Parent=LTnewLM_360028600.1 ### LTnewLM_36 . polypeptide 856203 859064 . + . ID=LTnewLM_360028600.1:pep;Derives_from=LTnewLM_360028600.1;orthologous_to=LmjF.36.2090_mRNA;ortholog_cluster=OG0006313;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 859973 861088 1 + . ID=LTnewLM_360028700 LTnewLM_36 AUGUSTUS mRNA 859973 861088 1 + . ID=LTnewLM_360028700.1;Parent=LTnewLM_360028700 LTnewLM_36 AUGUSTUS CDS 859973 861088 1 + 0 ID=LTnewLM_360028700.1:CDS:1;Parent=LTnewLM_360028700.1 ### LTnewLM_36 . polypeptide 859973 861088 . + . ID=LTnewLM_360028700.1:pep;Derives_from=LTnewLM_360028700.1;orthologous_to=LmjF.36.2100_mRNA;ortholog_cluster=OG0006314;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 862593 863453 1 + . ID=LTnewLM_360028800 LTnewLM_36 AUGUSTUS mRNA 862593 863453 1 + . ID=LTnewLM_360028800.1;Parent=LTnewLM_360028800 LTnewLM_36 AUGUSTUS CDS 862593 863453 1 + 0 ID=LTnewLM_360028800.1:CDS:1;Parent=LTnewLM_360028800.1 ### LTnewLM_36 . polypeptide 862593 863453 . + . ID=LTnewLM_360028800.1:pep;Derives_from=LTnewLM_360028800.1;orthologous_to=LmjF.36.2110_mRNA;ortholog_cluster=OG0006315;product=term%3DDnaJ domain/Domain of unknown function (DUF1977)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF09320 LTnewLM_36 Pfam protein_match 862647 862829 . + . Parent=LTnewLM_360028800.1:pep;Name=PF00226;signature_desc=DnaJ domain LTnewLM_36 Pfam protein_match 863166 863402 . + . Parent=LTnewLM_360028800.1:pep;Name=PF09320;signature_desc=Domain of unknown function (DUF1977) ### LTnewLM_36 AUGUSTUS gene 865809 866228 1 + . ID=LTnewLM_360028900 LTnewLM_36 AUGUSTUS mRNA 865809 866228 1 + . ID=LTnewLM_360028900.1;Parent=LTnewLM_360028900 LTnewLM_36 AUGUSTUS CDS 865809 866228 1 + 0 ID=LTnewLM_360028900.1:CDS:1;Parent=LTnewLM_360028900.1 ### LTnewLM_36 . polypeptide 865809 866228 . + . ID=LTnewLM_360028900.1:pep;Derives_from=LTnewLM_360028900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 866867 869191 1 + . ID=LTnewLM_360029000 LTnewLM_36 AUGUSTUS mRNA 866867 869191 1 + . ID=LTnewLM_360029000.1;Parent=LTnewLM_360029000 LTnewLM_36 AUGUSTUS CDS 866867 869191 1 + 0 ID=LTnewLM_360029000.1:CDS:1;Parent=LTnewLM_360029000.1 ### LTnewLM_36 . polypeptide 866867 869191 . + . ID=LTnewLM_360029000.1:pep;Derives_from=LTnewLM_360029000.1;orthologous_to=LmjF.36.2115_mRNA;ortholog_cluster=OG0006316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Liftoff gene 870598 875169 . + . ID=LTnewLM_360029100;coverage=0.992;sequence_ID=0.913;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2120_0 LTnewLM_36 Liftoff mRNA 870598 875169 . + . ID=LTnewLM_360029100.1;Parent=LTnewLM_360029100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 870598 875169 . + 0 ID=LTnewLM_360029100.1:CDS:1;Parent=LTnewLM_360029100.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 870598 875169 . + . ID=LTnewLM_360029100.1:pep;Derives_from=LTnewLM_360029100.1;orthologous_to=LmjF.36.2120_mRNA;ortholog_cluster=OG0006317;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 876357 878072 1 + . ID=LTnewLM_360029200 LTnewLM_36 AUGUSTUS mRNA 876357 878072 1 + . ID=LTnewLM_360029200.1;Parent=LTnewLM_360029200 LTnewLM_36 AUGUSTUS CDS 876357 878072 1 + 0 ID=LTnewLM_360029200.1:CDS:1;Parent=LTnewLM_360029200.1 ### LTnewLM_36 . polypeptide 876357 878072 . + . ID=LTnewLM_360029200.1:pep;Derives_from=LTnewLM_360029200.1;orthologous_to=LmjF.36.2130_mRNA;ortholog_cluster=OG0006318;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 876738 877247 . + . Parent=LTnewLM_360029200.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 877356 877679 . + . Parent=LTnewLM_360029200.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_36 AUGUSTUS gene 878795 879364 1 + . ID=LTnewLM_360029300 LTnewLM_36 AUGUSTUS mRNA 878795 879364 1 + . ID=LTnewLM_360029300.1;Parent=LTnewLM_360029300 LTnewLM_36 AUGUSTUS CDS 878795 879364 1 + 0 ID=LTnewLM_360029300.1:CDS:1;Parent=LTnewLM_360029300.1 ### LTnewLM_36 . polypeptide 878795 879364 . + . ID=LTnewLM_360029300.1:pep;Derives_from=LTnewLM_360029300.1;orthologous_to=LTnewLM_190019200.1,LTnewLM_230013500.1,LTnewLM_230013500.2,LTnewLM_270022100.1,LTnewLM_350016500.1,LmjF.32.2470_mRNA;ortholog_cluster=OG0000038;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 881167 882472 . + . ID=LTnewLM_360029400:pseudogene;coverage=0.998;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2140_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 881167 882472 . + . ID=LTnewLM_360029400.1;Parent=LTnewLM_360029400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 881167 882472 . + . ID=LTnewLM_360029400.1:pseudogenic_exon:1;Parent=LTnewLM_360029400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 881167 882472 . + . ID=LTnewLM_360029400.1:pep;Derives_from=LTnewLM_360029400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 883527 884333 1 + . ID=LTnewLM_360029500 LTnewLM_36 AUGUSTUS mRNA 883527 884333 1 + . ID=LTnewLM_360029500.1;Parent=LTnewLM_360029500 LTnewLM_36 AUGUSTUS CDS 883527 884333 1 + 0 ID=LTnewLM_360029500.1:CDS:1;Parent=LTnewLM_360029500.1 ### LTnewLM_36 . polypeptide 883527 884333 . + . ID=LTnewLM_360029500.1:pep;Derives_from=LTnewLM_360029500.1;orthologous_to=LmjF.36.2150_mRNA;ortholog_cluster=OG0006319;product=term%3Demp24/gp25L/p24 family/GOLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01105;Ontology_term=GO:0006810,GO:0016021 LTnewLM_36 Pfam protein_match 883644 884309 . + . Parent=LTnewLM_360029500.1:pep;Name=PF01105;signature_desc=emp24/gp25L/p24 family/GOLD;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 888565 888954 1 + . ID=LTnewLM_360029600 LTnewLM_36 AUGUSTUS mRNA 888565 888954 1 + . ID=LTnewLM_360029600.1;Parent=LTnewLM_360029600 LTnewLM_36 AUGUSTUS CDS 888565 888954 1 + 0 ID=LTnewLM_360029600.1:CDS:1;Parent=LTnewLM_360029600.1 ### LTnewLM_36 . polypeptide 888565 888954 . + . ID=LTnewLM_360029600.1:pep;Derives_from=LTnewLM_360029600.1;orthologous_to=LmjF.36.2160_mRNA;ortholog_cluster=OG0006320;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_36 Pfam protein_match 888640 888894 . + . Parent=LTnewLM_360029600.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_36 AUGUSTUS gene 890121 892424 1 + . ID=LTnewLM_360029700 LTnewLM_36 AUGUSTUS mRNA 890121 892424 1 + . ID=LTnewLM_360029700.1;Parent=LTnewLM_360029700 LTnewLM_36 AUGUSTUS CDS 890121 892424 1 + 0 ID=LTnewLM_360029700.1:CDS:1;Parent=LTnewLM_360029700.1 ### LTnewLM_36 . polypeptide 890121 892424 . + . ID=LTnewLM_360029700.1:pep;Derives_from=LTnewLM_360029700.1;orthologous_to=LmjF.36.2170_mRNA;ortholog_cluster=OG0006321;product=term%3D16S rRNA methyltransferase RsmB/F%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01189;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 890844 891524 . + . Parent=LTnewLM_360029700.1:pep;Name=PF01189;signature_desc=16S rRNA methyltransferase RsmB/F;Ontology_term=GO:0008168 ### LTnewLM_36 AUGUSTUS gene 894103 895674 1 + . ID=LTnewLM_360029800 LTnewLM_36 AUGUSTUS mRNA 894103 895674 1 + . ID=LTnewLM_360029800.1;Parent=LTnewLM_360029800 LTnewLM_36 AUGUSTUS CDS 894103 895674 1 + 0 ID=LTnewLM_360029800.1:CDS:1;Parent=LTnewLM_360029800.1 ### LTnewLM_36 . polypeptide 894103 895674 . + . ID=LTnewLM_360029800.1:pep;Derives_from=LTnewLM_360029800.1;orthologous_to=LmjF.36.2180_mRNA;ortholog_cluster=OG0006322;product=term%3DProtein-tyrosine phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00102;Ontology_term=GO:0006470,GO:0004725 LTnewLM_36 Pfam protein_match 894769 895545 . + . Parent=LTnewLM_360029800.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 ### LTnewLM_36 AUGUSTUS gene 897164 899953 1.83 + . ID=LTnewLM_360029900 LTnewLM_36 AUGUSTUS mRNA 897164 899953 0.99 + . ID=LTnewLM_360029900.1;Parent=LTnewLM_360029900 LTnewLM_36 AUGUSTUS CDS 897164 899953 0.99 + 0 ID=LTnewLM_360029900.1:CDS:1;Parent=LTnewLM_360029900.1 LTnewLM_36 AUGUSTUS mRNA 897698 899953 0.84 + . ID=LTnewLM_360029900.2;Parent=LTnewLM_360029900 LTnewLM_36 AUGUSTUS CDS 897698 899953 0.84 + 0 ID=LTnewLM_360029900.2:CDS:1;Parent=LTnewLM_360029900.2 ### LTnewLM_36 . polypeptide 897164 899953 . + . ID=LTnewLM_360029900.1:pep;Derives_from=LTnewLM_360029900.1;orthologous_to=LTnewLM_360029900.2,LmjF.36.2190_mRNA;ortholog_cluster=OG0000479;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 897698 899953 . + . ID=LTnewLM_360029900.2:pep;Derives_from=LTnewLM_360029900.2;orthologous_to=LTnewLM_360029900.1,LmjF.36.2190_mRNA;ortholog_cluster=OG0000479;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 900517 902448 1 + . ID=LTnewLM_360030000 LTnewLM_36 AUGUSTUS mRNA 900517 902448 1 + . ID=LTnewLM_360030000.1;Parent=LTnewLM_360030000 LTnewLM_36 AUGUSTUS CDS 900517 902448 1 + 0 ID=LTnewLM_360030000.1:CDS:1;Parent=LTnewLM_360030000.1 ### LTnewLM_36 . polypeptide 900517 902448 . + . ID=LTnewLM_360030000.1:pep;Derives_from=LTnewLM_360030000.1;orthologous_to=LmjF.36.2200_mRNA;ortholog_cluster=OG0006323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 903361 904896 1 + . ID=LTnewLM_360030100 LTnewLM_36 AUGUSTUS mRNA 903361 904896 1 + . ID=LTnewLM_360030100.1;Parent=LTnewLM_360030100 LTnewLM_36 AUGUSTUS CDS 903361 904896 1 + 0 ID=LTnewLM_360030100.1:CDS:1;Parent=LTnewLM_360030100.1 ### LTnewLM_36 . polypeptide 903361 904896 . + . ID=LTnewLM_360030100.1:pep;Derives_from=LTnewLM_360030100.1;orthologous_to=LmjF.36.2210_mRNA;ortholog_cluster=OG0006324;product=term%3DPlasma-membrane choline transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04515 LTnewLM_36 Pfam protein_match 903937 904800 . + . Parent=LTnewLM_360030100.1:pep;Name=PF04515;signature_desc=Plasma-membrane choline transporter ### LTnewLM_36 AUGUSTUS gene 906791 907918 1 + . ID=LTnewLM_360030200 LTnewLM_36 AUGUSTUS mRNA 906791 907918 1 + . ID=LTnewLM_360030200.1;Parent=LTnewLM_360030200 LTnewLM_36 AUGUSTUS CDS 906791 907918 1 + 0 ID=LTnewLM_360030200.1:CDS:1;Parent=LTnewLM_360030200.1 ### LTnewLM_36 . polypeptide 906791 907918 . + . ID=LTnewLM_360030200.1:pep;Derives_from=LTnewLM_360030200.1;orthologous_to=LmjF.36.2220_mRNA;ortholog_cluster=OG0006325;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 909503 911338 1 + . ID=LTnewLM_360030300 LTnewLM_36 AUGUSTUS mRNA 909503 911338 1 + . ID=LTnewLM_360030300.1;Parent=LTnewLM_360030300 LTnewLM_36 AUGUSTUS CDS 909503 911338 1 + 0 ID=LTnewLM_360030300.1:CDS:1;Parent=LTnewLM_360030300.1 ### LTnewLM_36 . polypeptide 909503 911338 . + . ID=LTnewLM_360030300.1:pep;Derives_from=LTnewLM_360030300.1;orthologous_to=LmjF.36.2230_mRNA;ortholog_cluster=OG0006326;product=term%3DSec1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00995;Ontology_term=GO:0016192,GO:0006904 LTnewLM_36 Pfam protein_match 909692 911308 . + . Parent=LTnewLM_360030300.1:pep;Name=PF00995;signature_desc=Sec1 family;Ontology_term=GO:0006904,GO:0016192 ### LTnewLM_36 . pseudogene 913399 921447 . + . ID=LTnewLM_360030400:pseudogene;coverage=0.999;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2240_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 913399 921447 . + . ID=LTnewLM_360030400.1;Parent=LTnewLM_360030400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 913399 921447 . + . ID=LTnewLM_360030400.1:pseudogenic_exon:1;Parent=LTnewLM_360030400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 913399 921447 . + . ID=LTnewLM_360030400.1:pep;Derives_from=LTnewLM_360030400.1;orthologous_to=LmjF.36.2240_mRNA;ortholog_cluster=OG0007685;product=term%3DGamma tubulin complex component N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17681 LTnewLM_36 Pfam protein_match 916300 916677 . + . Parent=LTnewLM_360030400.1:pep;Name=PF17681;signature_desc=Gamma tubulin complex component N-terminal ### LTnewLM_36 AUGUSTUS gene 922527 923633 1 + . ID=LTnewLM_360030500 LTnewLM_36 AUGUSTUS mRNA 922527 923633 1 + . ID=LTnewLM_360030500.1;Parent=LTnewLM_360030500 LTnewLM_36 AUGUSTUS CDS 922527 923633 1 + 0 ID=LTnewLM_360030500.1:CDS:1;Parent=LTnewLM_360030500.1 ### LTnewLM_36 . polypeptide 922527 923633 . + . ID=LTnewLM_360030500.1:pep;Derives_from=LTnewLM_360030500.1;orthologous_to=LmjF.36.2250_mRNA;ortholog_cluster=OG0006327;product=term%3D50S ribosome-binding GTPase/Ferrous iron transport protein B/C-terminal region of MMR_HSR1 domain/TGS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926|Pfam:PF02421|Pfam:PF16897|Pfam:PF02824;Ontology_term=GO:0005525,GO:0016021,GO:0015684,GO:0015093 LTnewLM_36 Pfam protein_match 922719 922991 . + . Parent=LTnewLM_360030500.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 922722 923006 . + . Parent=LTnewLM_360030500.1:pep;Name=PF02421;signature_desc=Ferrous iron transport protein B;Ontology_term=GO:0005525,GO:0015093,GO:0015684,GO:0016021 LTnewLM_36 Pfam protein_match 923079 923390 . + . Parent=LTnewLM_360030500.1:pep;Name=PF16897;signature_desc=C-terminal region of MMR_HSR1 domain LTnewLM_36 Pfam protein_match 923397 923621 . + . Parent=LTnewLM_360030500.1:pep;Name=PF02824;signature_desc=TGS domain ### LTnewLM_36 AUGUSTUS gene 926691 927614 1 + . ID=LTnewLM_360030600 LTnewLM_36 AUGUSTUS mRNA 926691 927614 1 + . ID=LTnewLM_360030600.1;Parent=LTnewLM_360030600 LTnewLM_36 AUGUSTUS CDS 926691 927614 1 + 0 ID=LTnewLM_360030600.1:CDS:1;Parent=LTnewLM_360030600.1 ### LTnewLM_36 . polypeptide 926691 927614 . + . ID=LTnewLM_360030600.1:pep;Derives_from=LTnewLM_360030600.1;orthologous_to=LmjF.36.2260_mRNA;ortholog_cluster=OG0006328;product=term%3DGuanylate kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00625 LTnewLM_36 Pfam protein_match 926823 927269 . + . Parent=LTnewLM_360030600.1:pep;Name=PF00625;signature_desc=Guanylate kinase LTnewLM_36 Pfam protein_match 927348 927581 . + . Parent=LTnewLM_360030600.1:pep;Name=PF00625;signature_desc=Guanylate kinase ### LTnewLM_36 AUGUSTUS gene 928956 930341 1 + . ID=LTnewLM_360030700 LTnewLM_36 AUGUSTUS mRNA 928956 930341 1 + . ID=LTnewLM_360030700.1;Parent=LTnewLM_360030700 LTnewLM_36 AUGUSTUS CDS 928956 930341 1 + 0 ID=LTnewLM_360030700.1:CDS:1;Parent=LTnewLM_360030700.1 ### LTnewLM_36 . polypeptide 928956 930341 . + . ID=LTnewLM_360030700.1:pep;Derives_from=LTnewLM_360030700.1;orthologous_to=LmjF.36.2270_mRNA;ortholog_cluster=OG0006329;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 931429 932916 1 + . ID=LTnewLM_360030800 LTnewLM_36 AUGUSTUS mRNA 931429 932916 1 + . ID=LTnewLM_360030800.1;Parent=LTnewLM_360030800 LTnewLM_36 AUGUSTUS CDS 931429 932916 1 + 0 ID=LTnewLM_360030800.1:CDS:1;Parent=LTnewLM_360030800.1 ### LTnewLM_36 . polypeptide 931429 932916 . + . ID=LTnewLM_360030800.1:pep;Derives_from=LTnewLM_360030800.1;orthologous_to=LmjF.36.2280_mRNA;ortholog_cluster=OG0006330;product=term%3DTetratricopeptide repeat/TPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432|Pfam:PF13181|Pfam:PF14559|Pfam:PF13414;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 931765 931899 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 931831 931905 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 932041 932133 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 932047 932196 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 932068 932184 . + . Parent=LTnewLM_360030800.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat LTnewLM_36 Pfam protein_match 932080 932178 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_36 Pfam protein_match 932143 932235 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 932275 932370 . + . Parent=LTnewLM_360030800.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_36 . pseudogene 934897 936974 . + . ID=LTnewLM_360030900:pseudogene;coverage=0.999;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2290_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 934897 936974 . + . ID=LTnewLM_360030900.1;Parent=LTnewLM_360030900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 934897 936974 . + . ID=LTnewLM_360030900.1:pseudogenic_exon:1;Parent=LTnewLM_360030900.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 934897 936974 . + . ID=LTnewLM_360030900.1:pep;Derives_from=LTnewLM_360030900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 949395 950834 1 + . ID=LTnewLM_360031000 LTnewLM_36 AUGUSTUS mRNA 949395 950834 1 + . ID=LTnewLM_360031000.1;Parent=LTnewLM_360031000 LTnewLM_36 AUGUSTUS CDS 949395 950834 1 + 0 ID=LTnewLM_360031000.1:CDS:1;Parent=LTnewLM_360031000.1 ### LTnewLM_36 . polypeptide 949395 950834 . + . ID=LTnewLM_360031000.1:pep;Derives_from=LTnewLM_360031000.1;orthologous_to=LmjF.36.2300_mRNA;ortholog_cluster=OG0006331;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 951800 952777 1 + . ID=LTnewLM_360031100 LTnewLM_36 AUGUSTUS mRNA 951800 952777 1 + . ID=LTnewLM_360031100.1;Parent=LTnewLM_360031100 LTnewLM_36 AUGUSTUS CDS 951800 952777 1 + 0 ID=LTnewLM_360031100.1:CDS:1;Parent=LTnewLM_360031100.1 ### LTnewLM_36 . polypeptide 951800 952777 . + . ID=LTnewLM_360031100.1:pep;Derives_from=LTnewLM_360031100.1;orthologous_to=LmjF.36.2310_mRNA;ortholog_cluster=OG0006332;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 953984 955219 1 + . ID=LTnewLM_360031200 LTnewLM_36 AUGUSTUS mRNA 953984 955219 1 + . ID=LTnewLM_360031200.1;Parent=LTnewLM_360031200 LTnewLM_36 AUGUSTUS CDS 953984 955219 1 + 0 ID=LTnewLM_360031200.1:CDS:1;Parent=LTnewLM_360031200.1 ### LTnewLM_36 . polypeptide 953984 955219 . + . ID=LTnewLM_360031200.1:pep;Derives_from=LTnewLM_360031200.1;orthologous_to=LmjF.36.2320_mRNA;ortholog_cluster=OG0006333;product=term%3DGlucokinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02685;Ontology_term=GO:0004340,GO:0051156,GO:0006096,GO:0005524 LTnewLM_36 Pfam protein_match 954071 954997 . + . Parent=LTnewLM_360031200.1:pep;Name=PF02685;signature_desc=Glucokinase;Ontology_term=GO:0004340,GO:0005524,GO:0006096,GO:0051156 ### LTnewLM_36 AUGUSTUS gene 957133 958317 1 + . ID=LTnewLM_360031300 LTnewLM_36 AUGUSTUS mRNA 957133 958317 1 + . ID=LTnewLM_360031300.1;Parent=LTnewLM_360031300 LTnewLM_36 AUGUSTUS CDS 957133 958317 1 + 0 ID=LTnewLM_360031300.1:CDS:1;Parent=LTnewLM_360031300.1 ### LTnewLM_36 . polypeptide 957133 958317 . + . ID=LTnewLM_360031300.1:pep;Derives_from=LTnewLM_360031300.1;orthologous_to=LmjF.36.2330_mRNA;ortholog_cluster=OG0006334;product=term%3DEndonuclease V%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04493;Ontology_term=GO:0004519,GO:0006281 LTnewLM_36 Pfam protein_match 957628 958248 . + . Parent=LTnewLM_360031300.1:pep;Name=PF04493;signature_desc=Endonuclease V;Ontology_term=GO:0004519,GO:0006281 ### LTnewLM_36 AUGUSTUS gene 958834 960069 1 + . ID=LTnewLM_360031400 LTnewLM_36 AUGUSTUS mRNA 958834 960069 1 + . ID=LTnewLM_360031400.1;Parent=LTnewLM_360031400 LTnewLM_36 AUGUSTUS CDS 958834 960069 1 + 0 ID=LTnewLM_360031400.1:CDS:1;Parent=LTnewLM_360031400.1 ### LTnewLM_36 . polypeptide 958834 960069 . + . ID=LTnewLM_360031400.1:pep;Derives_from=LTnewLM_360031400.1;orthologous_to=LmjF.36.2340_mRNA;ortholog_cluster=OG0006335;product=term%3Dshort chain dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00106;Ontology_term=GO:0008152,GO:0016491 LTnewLM_36 Pfam protein_match 959137 959550 . + . Parent=LTnewLM_360031400.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 ### LTnewLM_36 AUGUSTUS gene 961993 962988 1 + . ID=LTnewLM_360031500 LTnewLM_36 AUGUSTUS mRNA 961993 962988 1 + . ID=LTnewLM_360031500.1;Parent=LTnewLM_360031500 LTnewLM_36 AUGUSTUS CDS 961993 962988 1 + 0 ID=LTnewLM_360031500.1:CDS:1;Parent=LTnewLM_360031500.1 ### LTnewLM_36 . polypeptide 961993 962988 . + . ID=LTnewLM_360031500.1:pep;Derives_from=LTnewLM_360031500.1;orthologous_to=LTnewLM_300037100.1,LTnewLM_300037200.1,LmjF.30.2970_mRNA,LmjF.30.2980_mRNA;ortholog_cluster=OG0000094;product=term%3DGlyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain/Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00044|Pfam:PF02800;Ontology_term=GO:0055114,GO:0016620 LTnewLM_36 Pfam protein_match 961996 962292 . + . Parent=LTnewLM_360031500.1:pep;Name=PF00044;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016620,GO:0055114 LTnewLM_36 Pfam protein_match 962452 962922 . + . Parent=LTnewLM_360031500.1:pep;Name=PF02800;signature_desc=Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016620,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 975234 976580 1 + . ID=LTnewLM_360031600 LTnewLM_36 AUGUSTUS mRNA 975234 976580 1 + . ID=LTnewLM_360031600.1;Parent=LTnewLM_360031600 LTnewLM_36 AUGUSTUS CDS 975234 976580 1 + 0 ID=LTnewLM_360031600.1:CDS:1;Parent=LTnewLM_360031600.1 ### LTnewLM_36 . polypeptide 975234 976580 . + . ID=LTnewLM_360031600.1:pep;Derives_from=LTnewLM_360031600.1;orthologous_to=LmjF.36.2360_mRNA;ortholog_cluster=OG0006336;product=term%3DAminotransferase class I and II%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00155;Ontology_term=GO:0030170,GO:0009058 LTnewLM_36 Pfam protein_match 975453 976547 . + . Parent=LTnewLM_360031600.1:pep;Name=PF00155;signature_desc=Aminotransferase class I and II;Ontology_term=GO:0030170,GO:0009058 ### LTnewLM_36 AUGUSTUS gene 981124 981388 0.69 + . ID=LTnewLM_360031700 LTnewLM_36 AUGUSTUS mRNA 981124 981388 0.69 + . ID=LTnewLM_360031700.1;Parent=LTnewLM_360031700 LTnewLM_36 AUGUSTUS CDS 981124 981216 0.69 + 0 ID=LTnewLM_360031700.1:CDS:1;Parent=LTnewLM_360031700.1 LTnewLM_36 AUGUSTUS CDS 981260 981388 0.89 + 0 ID=LTnewLM_360031700.1:CDS:2;Parent=LTnewLM_360031700.1 ### LTnewLM_36 . polypeptide 981124 981388 . + . ID=LTnewLM_360031700.1:pep;Derives_from=LTnewLM_360031700.1;orthologous_to=LTnewLM_080011900.1,LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 981487 981975 . + . ID=LTnewLM_360031800.1:pep;Derives_from=LTnewLM_360031800.1;orthologous_to=LTnewLM_360031800.2;ortholog_cluster=OG0006337;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 981487 982200 1.14 + . ID=LTnewLM_360031800 LTnewLM_36 AUGUSTUS mRNA 981487 981975 0.84 + . ID=LTnewLM_360031800.1;Parent=LTnewLM_360031800 LTnewLM_36 AUGUSTUS CDS 981487 981975 0.84 + 0 ID=LTnewLM_360031800.1:CDS:1;Parent=LTnewLM_360031800.1 LTnewLM_36 AUGUSTUS mRNA 981487 982200 0.3 + . ID=LTnewLM_360031800.2;Parent=LTnewLM_360031800 LTnewLM_36 AUGUSTUS CDS 981487 981971 0.41 + 0 ID=LTnewLM_360031800.2:CDS:1;Parent=LTnewLM_360031800.2 LTnewLM_36 AUGUSTUS CDS 982119 982200 0.6 + 1 ID=LTnewLM_360031800.2:CDS:2;Parent=LTnewLM_360031800.2 ### LTnewLM_36 . polypeptide 981487 982200 . + . ID=LTnewLM_360031800.2:pep;Derives_from=LTnewLM_360031800.2;orthologous_to=LTnewLM_360031800.1;ortholog_cluster=OG0006337;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 983280 984194 1 + . ID=LTnewLM_360031900 LTnewLM_36 AUGUSTUS mRNA 983280 984194 1 + . ID=LTnewLM_360031900.1;Parent=LTnewLM_360031900 LTnewLM_36 AUGUSTUS CDS 983280 984194 1 + 0 ID=LTnewLM_360031900.1:CDS:1;Parent=LTnewLM_360031900.1 ### LTnewLM_36 . polypeptide 983280 984194 . + . ID=LTnewLM_360031900.1:pep;Derives_from=LTnewLM_360031900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 984857 985408 1 + . ID=LTnewLM_360032000 LTnewLM_36 AUGUSTUS mRNA 984857 985408 1 + . ID=LTnewLM_360032000.1;Parent=LTnewLM_360032000 LTnewLM_36 AUGUSTUS CDS 984857 985408 1 + 0 ID=LTnewLM_360032000.1:CDS:1;Parent=LTnewLM_360032000.1 ### LTnewLM_36 . polypeptide 984857 985408 . + . ID=LTnewLM_360032000.1:pep;Derives_from=LTnewLM_360032000.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 987335 990199 1 + . ID=LTnewLM_360032100 LTnewLM_36 AUGUSTUS mRNA 987335 990199 1 + . ID=LTnewLM_360032100.1;Parent=LTnewLM_360032100 LTnewLM_36 AUGUSTUS CDS 987335 990199 1 + 0 ID=LTnewLM_360032100.1:CDS:1;Parent=LTnewLM_360032100.1 ### LTnewLM_36 . polypeptide 987335 990199 . + . ID=LTnewLM_360032100.1:pep;Derives_from=LTnewLM_360032100.1;orthologous_to=LmjF.36.2370_mRNA;ortholog_cluster=OG0006338;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 991477 992538 1 + . ID=LTnewLM_360032200 LTnewLM_36 AUGUSTUS mRNA 991477 992538 1 + . ID=LTnewLM_360032200.1;Parent=LTnewLM_360032200 LTnewLM_36 AUGUSTUS CDS 991477 992538 1 + 0 ID=LTnewLM_360032200.1:CDS:1;Parent=LTnewLM_360032200.1 ### LTnewLM_36 . polypeptide 991477 992538 . + . ID=LTnewLM_360032200.1:pep;Derives_from=LTnewLM_360032200.1;orthologous_to=LTnewLM_360032300.1,LTnewLM_360032300.2,LmjF.36.2380_mRNA;ortholog_cluster=OG0000258;product=term%3DMycolic acid cyclopropane synthetase/ubiE/COQ5 methyltransferase family/Methyltransferase domain/Sterol methyltransferase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02353|Pfam:PF01209|Pfam:PF13847|Pfam:PF13489|Pfam:PF13649|Pfam:PF08241|Pfam:PF08498;Ontology_term=GO:0006694,GO:0008168,GO:0008152,GO:0008610 LTnewLM_36 Pfam protein_match 991621 992250 . + . Parent=LTnewLM_360032200.1:pep;Name=PF02353;signature_desc=Mycolic acid cyclopropane synthetase;Ontology_term=GO:0008610 LTnewLM_36 Pfam protein_match 991759 992103 . + . Parent=LTnewLM_360032200.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 991783 992112 . + . Parent=LTnewLM_360032200.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 991786 992235 . + . Parent=LTnewLM_360032200.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 991792 992073 . + . Parent=LTnewLM_360032200.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 991795 992085 . + . Parent=LTnewLM_360032200.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_36 Pfam protein_match 992335 992520 . + . Parent=LTnewLM_360032200.1:pep;Name=PF08498;signature_desc=Sterol methyltransferase C-terminal;Ontology_term=GO:0008168,GO:0006694 ### LTnewLM_36 . polypeptide 995302 996232 . + . ID=LTnewLM_360032300.1:pep;Derives_from=LTnewLM_360032300.1;orthologous_to=LTnewLM_360032200.1,LTnewLM_360032300.2,LmjF.36.2380_mRNA;ortholog_cluster=OG0000258;product=term%3DMycolic acid cyclopropane synthetase/ubiE/COQ5 methyltransferase family/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02353|Pfam:PF01209|Pfam:PF13847|Pfam:PF13489|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008168,GO:0008152,GO:0008610 LTnewLM_36 Pfam protein_match 995446 996075 . + . Parent=LTnewLM_360032300.1:pep;Name=PF02353;signature_desc=Mycolic acid cyclopropane synthetase;Ontology_term=GO:0008610 LTnewLM_36 Pfam protein_match 995584 995928 . + . Parent=LTnewLM_360032300.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 995608 995940 . + . Parent=LTnewLM_360032300.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995611 996060 . + . Parent=LTnewLM_360032300.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995617 995898 . + . Parent=LTnewLM_360032300.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995620 995910 . + . Parent=LTnewLM_360032300.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_36 AUGUSTUS gene 995302 996362 1.22 + . ID=LTnewLM_360032300 LTnewLM_36 AUGUSTUS mRNA 995302 996232 0.89 + . ID=LTnewLM_360032300.1;Parent=LTnewLM_360032300 LTnewLM_36 AUGUSTUS CDS 995302 996149 0.89 + 0 ID=LTnewLM_360032300.1:CDS:1;Parent=LTnewLM_360032300.1 LTnewLM_36 AUGUSTUS CDS 996220 996232 1 + 1 ID=LTnewLM_360032300.1:CDS:2;Parent=LTnewLM_360032300.1 LTnewLM_36 AUGUSTUS mRNA 995302 996362 0.33 + . ID=LTnewLM_360032300.2;Parent=LTnewLM_360032300 LTnewLM_36 AUGUSTUS CDS 995302 996288 0.46 + 0 ID=LTnewLM_360032300.2:CDS:1;Parent=LTnewLM_360032300.2 LTnewLM_36 AUGUSTUS CDS 996354 996362 0.44 + 0 ID=LTnewLM_360032300.2:CDS:2;Parent=LTnewLM_360032300.2 ### LTnewLM_36 . polypeptide 995302 996362 . + . ID=LTnewLM_360032300.2:pep;Derives_from=LTnewLM_360032300.2;orthologous_to=LTnewLM_360032200.1,LTnewLM_360032300.1,LmjF.36.2380_mRNA;ortholog_cluster=OG0000258;product=term%3DMycolic acid cyclopropane synthetase/ubiE/COQ5 methyltransferase family/Methyltransferase domain/Sterol methyltransferase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02353|Pfam:PF01209|Pfam:PF13847|Pfam:PF13489|Pfam:PF13649|Pfam:PF08241|Pfam:PF08498;Ontology_term=GO:0006694,GO:0008168,GO:0008152,GO:0008610 LTnewLM_36 Pfam protein_match 995446 996081 . + . Parent=LTnewLM_360032300.2:pep;Name=PF02353;signature_desc=Mycolic acid cyclopropane synthetase;Ontology_term=GO:0008610 LTnewLM_36 Pfam protein_match 995584 995928 . + . Parent=LTnewLM_360032300.2:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 995608 995940 . + . Parent=LTnewLM_360032300.2:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995611 996060 . + . Parent=LTnewLM_360032300.2:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995617 995898 . + . Parent=LTnewLM_360032300.2:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 995620 995910 . + . Parent=LTnewLM_360032300.2:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_36 Pfam protein_match 996160 996288 . + . Parent=LTnewLM_360032300.2:pep;Name=PF08498;signature_desc=Sterol methyltransferase C-terminal;Ontology_term=GO:0008168,GO:0006694 ### LTnewLM_36 AUGUSTUS gene 998370 999386 1 + . ID=LTnewLM_360032400 LTnewLM_36 AUGUSTUS mRNA 998370 999386 1 + . ID=LTnewLM_360032400.1;Parent=LTnewLM_360032400 LTnewLM_36 AUGUSTUS CDS 998370 999386 1 + 0 ID=LTnewLM_360032400.1:CDS:1;Parent=LTnewLM_360032400.1 ### LTnewLM_36 . polypeptide 998370 999386 . + . ID=LTnewLM_360032400.1:pep;Derives_from=LTnewLM_360032400.1;orthologous_to=LmjF.36.2400_mRNA;ortholog_cluster=OG0006339;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1004329 1010103 1 + . ID=LTnewLM_360032500 LTnewLM_36 AUGUSTUS mRNA 1004329 1010103 1 + . ID=LTnewLM_360032500.1;Parent=LTnewLM_360032500 LTnewLM_36 AUGUSTUS CDS 1004329 1010103 1 + 0 ID=LTnewLM_360032500.1:CDS:1;Parent=LTnewLM_360032500.1 ### LTnewLM_36 . polypeptide 1004329 1010103 . + . ID=LTnewLM_360032500.1:pep;Derives_from=LTnewLM_360032500.1;orthologous_to=LmjF.36.2410_mRNA;ortholog_cluster=OG0006340;product=term%3DCullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_36 Pfam protein_match 1009900 1010076 . + . Parent=LTnewLM_360032500.1:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_36 AUGUSTUS gene 1010677 1013235 1 + . ID=LTnewLM_360032600 LTnewLM_36 AUGUSTUS mRNA 1010677 1013235 1 + . ID=LTnewLM_360032600.1;Parent=LTnewLM_360032600 LTnewLM_36 AUGUSTUS CDS 1010677 1013235 1 + 0 ID=LTnewLM_360032600.1:CDS:1;Parent=LTnewLM_360032600.1 ### LTnewLM_36 . polypeptide 1010677 1013235 . + . ID=LTnewLM_360032600.1:pep;Derives_from=LTnewLM_360032600.1;orthologous_to=LmjF.36.2420_mRNA;ortholog_cluster=OG0006341;product=term%3DDipeptidyl peptidase IV (DPP IV) N-terminal region/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00930|Pfam:PF00326;Ontology_term=GO:0008236,GO:0016020,GO:0006508 LTnewLM_36 Pfam protein_match 1011181 1012233 . + . Parent=LTnewLM_360032600.1:pep;Name=PF00930;signature_desc=Dipeptidyl peptidase IV (DPP IV) N-terminal region;Ontology_term=GO:0006508,GO:0016020 LTnewLM_36 Pfam protein_match 1012567 1013202 . + . Parent=LTnewLM_360032600.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 ### LTnewLM_36 AUGUSTUS gene 1021938 1022738 1 + . ID=LTnewLM_360032700 LTnewLM_36 AUGUSTUS mRNA 1021938 1022738 1 + . ID=LTnewLM_360032700.1;Parent=LTnewLM_360032700 LTnewLM_36 AUGUSTUS CDS 1021938 1022738 1 + 0 ID=LTnewLM_360032700.1:CDS:1;Parent=LTnewLM_360032700.1 ### LTnewLM_36 . polypeptide 1021938 1022738 . + . ID=LTnewLM_360032700.1:pep;Derives_from=LTnewLM_360032700.1;orthologous_to=LmjF.36.2430_mRNA;ortholog_cluster=OG0006342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1023755 1024522 1 + . ID=LTnewLM_360032800 LTnewLM_36 AUGUSTUS mRNA 1023755 1024522 1 + . ID=LTnewLM_360032800.1;Parent=LTnewLM_360032800 LTnewLM_36 AUGUSTUS CDS 1023755 1024522 1 + 0 ID=LTnewLM_360032800.1:CDS:1;Parent=LTnewLM_360032800.1 ### LTnewLM_36 . polypeptide 1023755 1024522 . + . ID=LTnewLM_360032800.1:pep;Derives_from=LTnewLM_360032800.1;orthologous_to=LmjF.36.2440_mRNA;ortholog_cluster=OG0006343;product=term%3DFYVE zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01363;Ontology_term=GO:0046872 LTnewLM_36 Pfam protein_match 1023788 1023949 . + . Parent=LTnewLM_360032800.1:pep;Name=PF01363;signature_desc=FYVE zinc finger;Ontology_term=GO:0046872 ### LTnewLM_36 AUGUSTUS gene 1025844 1027163 1 + . ID=LTnewLM_360032900 LTnewLM_36 AUGUSTUS mRNA 1025844 1027163 1 + . ID=LTnewLM_360032900.1;Parent=LTnewLM_360032900 LTnewLM_36 AUGUSTUS CDS 1025844 1027163 1 + 0 ID=LTnewLM_360032900.1:CDS:1;Parent=LTnewLM_360032900.1 ### LTnewLM_36 . polypeptide 1025844 1027163 . + . ID=LTnewLM_360032900.1:pep;Derives_from=LTnewLM_360032900.1;orthologous_to=LmjF.36.2450_mRNA;ortholog_cluster=OG0006344;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1029056 1031176 1 + . ID=LTnewLM_360033000 LTnewLM_36 AUGUSTUS mRNA 1029056 1031176 1 + . ID=LTnewLM_360033000.1;Parent=LTnewLM_360033000 LTnewLM_36 AUGUSTUS CDS 1029056 1031176 1 + 0 ID=LTnewLM_360033000.1:CDS:1;Parent=LTnewLM_360033000.1 ### LTnewLM_36 . polypeptide 1029056 1031176 . + . ID=LTnewLM_360033000.1:pep;Derives_from=LTnewLM_360033000.1;orthologous_to=LmjF.36.2460_mRNA;ortholog_cluster=OG0006345;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1032580 1034001 1 + . ID=LTnewLM_360033100 LTnewLM_36 AUGUSTUS mRNA 1032580 1034001 1 + . ID=LTnewLM_360033100.1;Parent=LTnewLM_360033100 LTnewLM_36 AUGUSTUS CDS 1032580 1034001 1 + 0 ID=LTnewLM_360033100.1:CDS:1;Parent=LTnewLM_360033100.1 ### LTnewLM_36 . polypeptide 1032580 1034001 . + . ID=LTnewLM_360033100.1:pep;Derives_from=LTnewLM_360033100.1;orthologous_to=LmjF.36.2470_mRNA;ortholog_cluster=OG0006346;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_36 Pfam protein_match 1032850 1033134 . + . Parent=LTnewLM_360033100.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_36 AUGUSTUS gene 1036324 1037100 1 + . ID=LTnewLM_360033200 LTnewLM_36 AUGUSTUS mRNA 1036324 1037100 1 + . ID=LTnewLM_360033200.1;Parent=LTnewLM_360033200 LTnewLM_36 AUGUSTUS CDS 1036324 1037100 1 + 0 ID=LTnewLM_360033200.1:CDS:1;Parent=LTnewLM_360033200.1 ### LTnewLM_36 . polypeptide 1036324 1037100 . + . ID=LTnewLM_360033200.1:pep;Derives_from=LTnewLM_360033200.1;orthologous_to=LmjF.36.2480_mRNA;ortholog_cluster=OG0006347;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1038748 1040229 1 + . ID=LTnewLM_360033300 LTnewLM_36 AUGUSTUS mRNA 1038748 1040229 1 + . ID=LTnewLM_360033300.1;Parent=LTnewLM_360033300 LTnewLM_36 AUGUSTUS CDS 1038748 1040229 1 + 0 ID=LTnewLM_360033300.1:CDS:1;Parent=LTnewLM_360033300.1 ### LTnewLM_36 . polypeptide 1038748 1040229 . + . ID=LTnewLM_360033300.1:pep;Derives_from=LTnewLM_360033300.1;orthologous_to=LmjF.36.2490_mRNA;ortholog_cluster=OG0006348;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1041632 1043587 1 + . ID=LTnewLM_360033400 LTnewLM_36 AUGUSTUS mRNA 1041632 1043587 1 + . ID=LTnewLM_360033400.1;Parent=LTnewLM_360033400 LTnewLM_36 AUGUSTUS CDS 1041632 1043587 1 + 0 ID=LTnewLM_360033400.1:CDS:1;Parent=LTnewLM_360033400.1 ### LTnewLM_36 . polypeptide 1041632 1043587 . + . ID=LTnewLM_360033400.1:pep;Derives_from=LTnewLM_360033400.1;orthologous_to=LmjF.36.2500_mRNA;ortholog_cluster=OG0006349;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1041821 1041895 . + . Parent=LTnewLM_360033400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1042193 1042297 . + . Parent=LTnewLM_360033400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1044272 1046974 1 + . ID=LTnewLM_360033500 LTnewLM_36 AUGUSTUS mRNA 1044272 1046974 1 + . ID=LTnewLM_360033500.1;Parent=LTnewLM_360033500 LTnewLM_36 AUGUSTUS CDS 1044272 1046974 1 + 0 ID=LTnewLM_360033500.1:CDS:1;Parent=LTnewLM_360033500.1 ### LTnewLM_36 . polypeptide 1044272 1046974 . + . ID=LTnewLM_360033500.1:pep;Derives_from=LTnewLM_360033500.1;orthologous_to=LmjF.36.2510_mRNA;ortholog_cluster=OG0006350;product=term%3DNup93/Nic96%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04097;Ontology_term=GO:0006810,GO:0005643 LTnewLM_36 Pfam protein_match 1045202 1046920 . + . Parent=LTnewLM_360033500.1:pep;Name=PF04097;signature_desc=Nup93/Nic96;Ontology_term=GO:0006810,GO:0005643 ### LTnewLM_36 AUGUSTUS gene 1048006 1049058 1 + . ID=LTnewLM_360033600 LTnewLM_36 AUGUSTUS mRNA 1048006 1049058 1 + . ID=LTnewLM_360033600.1;Parent=LTnewLM_360033600 LTnewLM_36 AUGUSTUS CDS 1048006 1049058 1 + 0 ID=LTnewLM_360033600.1:CDS:1;Parent=LTnewLM_360033600.1 ### LTnewLM_36 . polypeptide 1048006 1049058 . + . ID=LTnewLM_360033600.1:pep;Derives_from=LTnewLM_360033600.1;orthologous_to=LmjF.36.2520_mRNA;ortholog_cluster=OG0006351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1049601 1051940 1 + . ID=LTnewLM_360033700 LTnewLM_36 AUGUSTUS mRNA 1049601 1051940 1 + . ID=LTnewLM_360033700.1;Parent=LTnewLM_360033700 LTnewLM_36 AUGUSTUS CDS 1049601 1051940 1 + 0 ID=LTnewLM_360033700.1:CDS:1;Parent=LTnewLM_360033700.1 ### LTnewLM_36 . polypeptide 1049601 1051940 . + . ID=LTnewLM_360033700.1:pep;Derives_from=LTnewLM_360033700.1;orthologous_to=LmjF.36.2530_mRNA;ortholog_cluster=OG0006352;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1050276 1051040 . + . Parent=LTnewLM_360033700.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1051317 1051646 . + . Parent=LTnewLM_360033700.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_36 AUGUSTUS gene 1052752 1053960 1 + . ID=LTnewLM_360033800 LTnewLM_36 AUGUSTUS mRNA 1052752 1053960 1 + . ID=LTnewLM_360033800.1;Parent=LTnewLM_360033800 LTnewLM_36 AUGUSTUS CDS 1052752 1053960 1 + 0 ID=LTnewLM_360033800.1:CDS:1;Parent=LTnewLM_360033800.1 ### LTnewLM_36 . polypeptide 1052752 1053960 . + . ID=LTnewLM_360033800.1:pep;Derives_from=LTnewLM_360033800.1;orthologous_to=LmjF.36.2540_mRNA;ortholog_cluster=OG0006353;product=term%3DFatty acid hydroxylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04116;Ontology_term=GO:0055114,GO:0005506,GO:0006633,GO:0016491 LTnewLM_36 Pfam protein_match 1053367 1053822 . + . Parent=LTnewLM_360033800.1:pep;Name=PF04116;signature_desc=Fatty acid hydroxylase;Ontology_term=GO:0005506,GO:0016491,GO:0006633,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 1056507 1057628 1 + . ID=LTnewLM_360033900 LTnewLM_36 AUGUSTUS mRNA 1056507 1057628 1 + . ID=LTnewLM_360033900.1;Parent=LTnewLM_360033900 LTnewLM_36 AUGUSTUS CDS 1056507 1057628 1 + 0 ID=LTnewLM_360033900.1:CDS:1;Parent=LTnewLM_360033900.1 ### LTnewLM_36 . polypeptide 1056507 1057628 . + . ID=LTnewLM_360033900.1:pep;Derives_from=LTnewLM_360033900.1;orthologous_to=LmjF.36.2550_mRNA;ortholog_cluster=OG0006354;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1058706 1061486 1 + . ID=LTnewLM_360034000 LTnewLM_36 AUGUSTUS mRNA 1058706 1061486 1 + . ID=LTnewLM_360034000.1;Parent=LTnewLM_360034000 LTnewLM_36 AUGUSTUS CDS 1058706 1061486 1 + 0 ID=LTnewLM_360034000.1:CDS:1;Parent=LTnewLM_360034000.1 ### LTnewLM_36 . polypeptide 1058706 1061486 . + . ID=LTnewLM_360034000.1:pep;Derives_from=LTnewLM_360034000.1;orthologous_to=LmjF.36.2560_mRNA;ortholog_cluster=OG0006355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Aragorn_1.2.36 gene 1061788 1061859 . + . ID=LTnewLM_360034100 LTnewLM_36 Aragorn_1.2.36 tRNA 1061788 1061859 . + . ID=LTnewLM_360034100:tRNA;Parent=LTnewLM_360034100;aa=Gly;anticodon=gcc;gc_content=65.3 ### LTnewLM_36 Aragorn_1.2.36 gene 1062487 1062558 . - . ID=LTnewLM_360034200 LTnewLM_36 Aragorn_1.2.36 tRNA 1062487 1062558 . - . ID=LTnewLM_360034200:tRNA;Parent=LTnewLM_360034200;aa=Thr;anticodon=agt;gc_content=62.5 ### LTnewLM_36 Aragorn_1.2.36 gene 1062621 1062691 . - . ID=LTnewLM_360034300 LTnewLM_36 Aragorn_1.2.36 tRNA 1062621 1062691 . - . ID=LTnewLM_360034300:tRNA;Parent=LTnewLM_360034300;aa=Gly;anticodon=gcc;gc_content=64.8 ### LTnewLM_36 Aragorn_1.2.36 gene 1062765 1062836 . + . ID=LTnewLM_360034400 LTnewLM_36 Aragorn_1.2.36 tRNA 1062765 1062836 . + . ID=LTnewLM_360034400:tRNA;Parent=LTnewLM_360034400;aa=Pro;anticodon=agg;gc_content=59.7 ### LTnewLM_36 AUGUSTUS gene 1065251 1066795 1 - . ID=LTnewLM_360034500 LTnewLM_36 AUGUSTUS mRNA 1065251 1066795 1 - . ID=LTnewLM_360034500.1;Parent=LTnewLM_360034500 LTnewLM_36 AUGUSTUS CDS 1065251 1066795 1 - 0 ID=LTnewLM_360034500.1:CDS:1;Parent=LTnewLM_360034500.1 ### LTnewLM_36 . polypeptide 1065251 1066795 . - . ID=LTnewLM_360034500.1:pep;Derives_from=LTnewLM_360034500.1;orthologous_to=LmjF.36.2570_mRNA;ortholog_cluster=OG0006356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1069566 1072541 1 - . ID=LTnewLM_360034600 LTnewLM_36 AUGUSTUS mRNA 1069566 1072541 1 - . ID=LTnewLM_360034600.1;Parent=LTnewLM_360034600 LTnewLM_36 AUGUSTUS CDS 1069566 1072541 1 - 0 ID=LTnewLM_360034600.1:CDS:1;Parent=LTnewLM_360034600.1 ### LTnewLM_36 . polypeptide 1069566 1072541 . - . ID=LTnewLM_360034600.1:pep;Derives_from=LTnewLM_360034600.1;orthologous_to=LmjF.36.2580_mRNA;ortholog_cluster=OG0006357;product=term%3DGlycerophosphoryl diester phosphodiesterase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03009;Ontology_term=GO:0008081,GO:0006629 LTnewLM_36 Pfam protein_match 1069593 1070765 . - . Parent=LTnewLM_360034600.1:pep;Name=PF03009;signature_desc=Glycerophosphoryl diester phosphodiesterase family;Ontology_term=GO:0008081,GO:0006629 ### LTnewLM_36 AUGUSTUS gene 1075638 1077353 1 - . ID=LTnewLM_360034700 LTnewLM_36 AUGUSTUS mRNA 1075638 1077353 1 - . ID=LTnewLM_360034700.1;Parent=LTnewLM_360034700 LTnewLM_36 AUGUSTUS CDS 1075638 1077353 1 - 0 ID=LTnewLM_360034700.1:CDS:1;Parent=LTnewLM_360034700.1 ### LTnewLM_36 . polypeptide 1075638 1077353 . - . ID=LTnewLM_360034700.1:pep;Derives_from=LTnewLM_360034700.1;orthologous_to=LmjF.36.2590_mRNA;ortholog_cluster=OG0006358;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_36 Pfam protein_match 1076301 1077125 . - . Parent=LTnewLM_360034700.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_36 AUGUSTUS gene 1078650 1080809 1 - . ID=LTnewLM_360034800 LTnewLM_36 AUGUSTUS mRNA 1078650 1080809 1 - . ID=LTnewLM_360034800.1;Parent=LTnewLM_360034800 LTnewLM_36 AUGUSTUS CDS 1078650 1080809 1 - 0 ID=LTnewLM_360034800.1:CDS:1;Parent=LTnewLM_360034800.1 ### LTnewLM_36 . polypeptide 1078650 1080809 . - . ID=LTnewLM_360034800.1:pep;Derives_from=LTnewLM_360034800.1;orthologous_to=LmjF.36.2600_mRNA;ortholog_cluster=OG0006359;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13540|Pfam:PF00415 LTnewLM_36 Pfam protein_match 1079772 1079873 . - . Parent=LTnewLM_360034800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1079835 1079918 . - . Parent=LTnewLM_360034800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1079994 1080083 . - . Parent=LTnewLM_360034800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1080429 1080518 . - . Parent=LTnewLM_360034800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_36 . pseudogene 1082341 1084631 . - . ID=LTnewLM_360034900:pseudogene;coverage=0.988;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2610_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1082341 1084631 . - . ID=LTnewLM_360034900.1;Parent=LTnewLM_360034900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1082341 1084631 . - . ID=LTnewLM_360034900.1:pseudogenic_exon:1;Parent=LTnewLM_360034900.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1082341 1084631 . - . ID=LTnewLM_360034900.1:pep;Derives_from=LTnewLM_360034900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1085381 1085596 1 - . ID=LTnewLM_360035000 LTnewLM_36 AUGUSTUS mRNA 1085381 1085596 1 - . ID=LTnewLM_360035000.1;Parent=LTnewLM_360035000 LTnewLM_36 AUGUSTUS CDS 1085381 1085596 1 - 0 ID=LTnewLM_360035000.1:CDS:1;Parent=LTnewLM_360035000.1 ### LTnewLM_36 . polypeptide 1085381 1085596 . - . ID=LTnewLM_360035000.1:pep;Derives_from=LTnewLM_360035000.1;orthologous_to=LTnewLM_150014300.1,LTnewLM_170021300.1;ortholog_cluster=OG0000340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1087548 1092752 1 - . ID=LTnewLM_360035100 LTnewLM_36 AUGUSTUS mRNA 1087548 1092752 1 - . ID=LTnewLM_360035100.1;Parent=LTnewLM_360035100 LTnewLM_36 AUGUSTUS CDS 1087548 1092752 1 - 0 ID=LTnewLM_360035100.1:CDS:1;Parent=LTnewLM_360035100.1 ### LTnewLM_36 . polypeptide 1087548 1092752 . - . ID=LTnewLM_360035100.1:pep;Derives_from=LTnewLM_360035100.1;orthologous_to=LmjF.36.2620_mRNA;ortholog_cluster=OG0006360;product=term%3DVRR-NUC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08774;Ontology_term=GO:0016788 LTnewLM_36 Pfam protein_match 1087599 1087823 . - . Parent=LTnewLM_360035100.1:pep;Name=PF08774;signature_desc=VRR-NUC domain;Ontology_term=GO:0016788 ### LTnewLM_36 AUGUSTUS gene 1093977 1104350 1 - . ID=LTnewLM_360035200 LTnewLM_36 AUGUSTUS mRNA 1093977 1104350 1 - . ID=LTnewLM_360035200.1;Parent=LTnewLM_360035200 LTnewLM_36 AUGUSTUS CDS 1093977 1104350 1 - 0 ID=LTnewLM_360035200.1:CDS:1;Parent=LTnewLM_360035200.1 ### LTnewLM_36 . polypeptide 1093977 1104350 . - . ID=LTnewLM_360035200.1:pep;Derives_from=LTnewLM_360035200.1;orthologous_to=LmjF.36.2630_mRNA;ortholog_cluster=OG0006361;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1094019 1094414 . - . Parent=LTnewLM_360035200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1094754 1095329 . - . Parent=LTnewLM_360035200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 1094760 1095317 . - . Parent=LTnewLM_360035200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1111612 1113267 1 - . ID=LTnewLM_360035300 LTnewLM_36 AUGUSTUS mRNA 1111612 1113267 1 - . ID=LTnewLM_360035300.1;Parent=LTnewLM_360035300 LTnewLM_36 AUGUSTUS CDS 1111612 1113267 1 - 0 ID=LTnewLM_360035300.1:CDS:1;Parent=LTnewLM_360035300.1 ### LTnewLM_36 . polypeptide 1111612 1113267 . - . ID=LTnewLM_360035300.1:pep;Derives_from=LTnewLM_360035300.1;orthologous_to=LTnewLM_000008300.1,LmjF.36.2640_mRNA;ortholog_cluster=OG0000304;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1114094 1115116 1 - . ID=LTnewLM_360035400 LTnewLM_36 AUGUSTUS mRNA 1114094 1115116 1 - . ID=LTnewLM_360035400.1;Parent=LTnewLM_360035400 LTnewLM_36 AUGUSTUS CDS 1114094 1115116 1 - 0 ID=LTnewLM_360035400.1:CDS:1;Parent=LTnewLM_360035400.1 ### LTnewLM_36 . polypeptide 1114094 1115116 . - . ID=LTnewLM_360035400.1:pep;Derives_from=LTnewLM_360035400.1;orthologous_to=LTnewLM_000008200.1,LmjF.36.2650_mRNA;ortholog_cluster=OG0000303;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_36 Pfam protein_match 1114379 1114702 . - . Parent=LTnewLM_360035400.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_36 AUGUSTUS gene 1115998 1116222 1 - . ID=LTnewLM_360035500 LTnewLM_36 AUGUSTUS mRNA 1115998 1116222 1 - . ID=LTnewLM_360035500.1;Parent=LTnewLM_360035500 LTnewLM_36 AUGUSTUS CDS 1115998 1116222 1 - 0 ID=LTnewLM_360035500.1:CDS:1;Parent=LTnewLM_360035500.1 ### LTnewLM_36 . polypeptide 1115998 1116222 . - . ID=LTnewLM_360035500.1:pep;Derives_from=LTnewLM_360035500.1;orthologous_to=LTnewLM_000008100.1;ortholog_cluster=OG0000556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1116342 1116665 0.75 - . ID=LTnewLM_360035600 LTnewLM_36 AUGUSTUS mRNA 1116342 1116665 0.75 - . ID=LTnewLM_360035600.1;Parent=LTnewLM_360035600 LTnewLM_36 AUGUSTUS CDS 1116342 1116467 0.75 - 0 ID=LTnewLM_360035600.1:CDS:1;Parent=LTnewLM_360035600.1 LTnewLM_36 AUGUSTUS CDS 1116513 1116665 0.78 - 0 ID=LTnewLM_360035600.1:CDS:2;Parent=LTnewLM_360035600.1 ### LTnewLM_36 . polypeptide 1116342 1116665 . - . ID=LTnewLM_360035600.1:pep;Derives_from=LTnewLM_360035600.1;orthologous_to=LTnewLM_000008000.1;ortholog_cluster=OG0000555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1116783 1117004 1 - . ID=LTnewLM_360035700 LTnewLM_36 AUGUSTUS mRNA 1116783 1117004 1 - . ID=LTnewLM_360035700.1;Parent=LTnewLM_360035700 LTnewLM_36 AUGUSTUS CDS 1116783 1117004 1 - 0 ID=LTnewLM_360035700.1:CDS:1;Parent=LTnewLM_360035700.1 ### LTnewLM_36 . polypeptide 1116783 1117004 . - . ID=LTnewLM_360035700.1:pep;Derives_from=LTnewLM_360035700.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1119925 1121311 0.58 - . ID=LTnewLM_360035800 LTnewLM_36 AUGUSTUS mRNA 1119925 1121311 0.58 - . ID=LTnewLM_360035800.1;Parent=LTnewLM_360035800 LTnewLM_36 AUGUSTUS CDS 1119925 1120500 0.66 - 0 ID=LTnewLM_360035800.1:CDS:1;Parent=LTnewLM_360035800.1 LTnewLM_36 AUGUSTUS CDS 1120601 1121311 0.91 - 0 ID=LTnewLM_360035800.1:CDS:2;Parent=LTnewLM_360035800.1 ### LTnewLM_36 . polypeptide 1119925 1121311 . - . ID=LTnewLM_360035800.1:pep;Derives_from=LTnewLM_360035800.1;orthologous_to=LTnewLM_000007900.1,LmjF.36.2660_mRNA;ortholog_cluster=OG0000302;product=term%3DBiotin-requiring enzyme/e3 binding domain/2-oxoacid dehydrogenases acyltransferase (catalytic domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00364|Pfam:PF02817|Pfam:PF00198;Ontology_term=GO:0016746,GO:0008152 LTnewLM_36 Pfam protein_match 1120031 1120612 . - . Parent=LTnewLM_360035800.1:pep;Name=PF00198;signature_desc=2-oxoacid dehydrogenases acyltransferase (catalytic domain);Ontology_term=GO:0016746,GO:0008152 LTnewLM_36 Pfam protein_match 1120772 1120876 . - . Parent=LTnewLM_360035800.1:pep;Name=PF02817;signature_desc=e3 binding domain;Ontology_term=GO:0016746,GO:0008152 LTnewLM_36 Pfam protein_match 1121030 1121245 . - . Parent=LTnewLM_360035800.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme ### LTnewLM_36 AUGUSTUS gene 1122247 1123347 1 - . ID=LTnewLM_360035900 LTnewLM_36 AUGUSTUS mRNA 1122247 1123347 1 - . ID=LTnewLM_360035900.1;Parent=LTnewLM_360035900 LTnewLM_36 AUGUSTUS CDS 1122247 1123347 1 - 0 ID=LTnewLM_360035900.1:CDS:1;Parent=LTnewLM_360035900.1 ### LTnewLM_36 . polypeptide 1122247 1123347 . - . ID=LTnewLM_360035900.1:pep;Derives_from=LTnewLM_360035900.1;orthologous_to=LTnewLM_000007800.1,LmjF.36.2670_mRNA;ortholog_cluster=OG0000301;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1124122 1127139 1 - . ID=LTnewLM_360036000 LTnewLM_36 AUGUSTUS mRNA 1124122 1127139 1 - . ID=LTnewLM_360036000.1;Parent=LTnewLM_360036000 LTnewLM_36 AUGUSTUS CDS 1124122 1127139 1 - 0 ID=LTnewLM_360036000.1:CDS:1;Parent=LTnewLM_360036000.1 ### LTnewLM_36 . polypeptide 1124122 1127139 . - . ID=LTnewLM_360036000.1:pep;Derives_from=LTnewLM_360036000.1;orthologous_to=LTnewLM_000007700.1,LmjF.36.2680_mRNA;ortholog_cluster=OG0000480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1127975 1128943 1 - . ID=LTnewLM_360036100 LTnewLM_36 AUGUSTUS mRNA 1127975 1128943 1 - . ID=LTnewLM_360036100.1;Parent=LTnewLM_360036100 LTnewLM_36 AUGUSTUS CDS 1127975 1128943 1 - 0 ID=LTnewLM_360036100.1:CDS:1;Parent=LTnewLM_360036100.1 ### LTnewLM_36 . polypeptide 1127975 1128943 . - . ID=LTnewLM_360036100.1:pep;Derives_from=LTnewLM_360036100.1;orthologous_to=LmjF.36.2685_mRNA;ortholog_cluster=OG0006362;product=term%3DPentapeptide repeats (9 copies)/Pentapeptide repeats (8 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13599|Pfam:PF00805 LTnewLM_36 Pfam protein_match 1128170 1128277 . - . Parent=LTnewLM_360036100.1:pep;Name=PF00805;signature_desc=Pentapeptide repeats (8 copies) LTnewLM_36 Pfam protein_match 1128206 1128436 . - . Parent=LTnewLM_360036100.1:pep;Name=PF13599;signature_desc=Pentapeptide repeats (9 copies) LTnewLM_36 Pfam protein_match 1128311 1128421 . - . Parent=LTnewLM_360036100.1:pep;Name=PF00805;signature_desc=Pentapeptide repeats (8 copies) ### LTnewLM_36 AUGUSTUS gene 1129523 1130542 1 - . ID=LTnewLM_360036200 LTnewLM_36 AUGUSTUS mRNA 1129523 1130542 1 - . ID=LTnewLM_360036200.1;Parent=LTnewLM_360036200 LTnewLM_36 AUGUSTUS CDS 1129523 1130542 1 - 0 ID=LTnewLM_360036200.1:CDS:1;Parent=LTnewLM_360036200.1 ### LTnewLM_36 . polypeptide 1129523 1130542 . - . ID=LTnewLM_360036200.1:pep;Derives_from=LTnewLM_360036200.1;orthologous_to=LmjF.36.2690_mRNA;ortholog_cluster=OG0006363;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1131456 1135784 1 - . ID=LTnewLM_360036300 LTnewLM_36 AUGUSTUS mRNA 1131456 1135784 1 - . ID=LTnewLM_360036300.1;Parent=LTnewLM_360036300 LTnewLM_36 AUGUSTUS CDS 1131456 1135784 1 - 0 ID=LTnewLM_360036300.1:CDS:1;Parent=LTnewLM_360036300.1 ### LTnewLM_36 . polypeptide 1131456 1135784 . - . ID=LTnewLM_360036300.1:pep;Derives_from=LTnewLM_360036300.1;orthologous_to=LmjF.36.2700_mRNA;ortholog_cluster=OG0006364;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1136867 1138843 0.45 - . ID=LTnewLM_360036400 LTnewLM_36 AUGUSTUS mRNA 1136867 1138843 0.45 - . ID=LTnewLM_360036400.1;Parent=LTnewLM_360036400 LTnewLM_36 AUGUSTUS CDS 1136867 1138843 0.45 - 0 ID=LTnewLM_360036400.1:CDS:1;Parent=LTnewLM_360036400.1 ### LTnewLM_36 . polypeptide 1136867 1138843 . - . ID=LTnewLM_360036400.1:pep;Derives_from=LTnewLM_360036400.1;orthologous_to=LmjF.36.2710_mRNA;ortholog_cluster=OG0006365;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/Peptidase family M41%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004|Pfam:PF01434;Ontology_term=GO:0004222,GO:0016887,GO:0006508,GO:0005524 LTnewLM_36 Pfam protein_match 1136996 1137550 . - . Parent=LTnewLM_360036400.1:pep;Name=PF01434;signature_desc=Peptidase family M41;Ontology_term=GO:0004222,GO:0005524,GO:0006508 LTnewLM_36 Pfam protein_match 1137797 1138177 . - . Parent=LTnewLM_360036400.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 1137980 1138177 . - . Parent=LTnewLM_360036400.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_36 AUGUSTUS gene 1139216 1142032 1 - . ID=LTnewLM_360036500 LTnewLM_36 AUGUSTUS mRNA 1139216 1142032 1 - . ID=LTnewLM_360036500.1;Parent=LTnewLM_360036500 LTnewLM_36 AUGUSTUS CDS 1139216 1142032 1 - 0 ID=LTnewLM_360036500.1:CDS:1;Parent=LTnewLM_360036500.1 ### LTnewLM_36 . polypeptide 1139216 1142032 . - . ID=LTnewLM_360036500.1:pep;Derives_from=LTnewLM_360036500.1;orthologous_to=LmjF.36.2720_mRNA;ortholog_cluster=OG0006366;product=term%3DrRNA processing/ribosome biogenesis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08167 LTnewLM_36 Pfam protein_match 1140260 1140835 . - . Parent=LTnewLM_360036500.1:pep;Name=PF08167;signature_desc=rRNA processing/ribosome biogenesis ### LTnewLM_36 AUGUSTUS gene 1148534 1148992 1 - . ID=LTnewLM_360036600 LTnewLM_36 AUGUSTUS mRNA 1148534 1148992 1 - . ID=LTnewLM_360036600.1;Parent=LTnewLM_360036600 LTnewLM_36 AUGUSTUS CDS 1148534 1148992 1 - 0 ID=LTnewLM_360036600.1:CDS:1;Parent=LTnewLM_360036600.1 ### LTnewLM_36 . polypeptide 1148534 1148992 . - . ID=LTnewLM_360036600.1:pep;Derives_from=LTnewLM_360036600.1;orthologous_to=LmjF.36.2730_mRNA;ortholog_cluster=OG0006367;product=term%3DD-Tyr-tRNA(Tyr) deacylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02580;Ontology_term=GO:0016788,GO:0019478,GO:0005737 LTnewLM_36 Pfam protein_match 1148555 1148989 . - . Parent=LTnewLM_360036600.1:pep;Name=PF02580;signature_desc=D-Tyr-tRNA(Tyr) deacylase;Ontology_term=GO:0016788,GO:0019478,GO:0005737 ### LTnewLM_36 Liftoff gene 1149521 1152805 . - . ID=LTnewLM_360036700;coverage=1.0;sequence_ID=0.962;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.2740_0 LTnewLM_36 Liftoff mRNA 1149521 1152805 . - . ID=LTnewLM_360036700.1;Parent=LTnewLM_360036700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1149521 1152805 . - 0 ID=LTnewLM_360036700.1:CDS:1;Parent=LTnewLM_360036700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1149521 1152805 . - . ID=LTnewLM_360036700.1:pep;Derives_from=LTnewLM_360036700.1;orthologous_to=LmjF.36.2740_mRNA;ortholog_cluster=OG0006368;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1154625 1155101 1 - . ID=LTnewLM_360036800 LTnewLM_36 AUGUSTUS mRNA 1154625 1155101 1 - . ID=LTnewLM_360036800.1;Parent=LTnewLM_360036800 LTnewLM_36 AUGUSTUS CDS 1154625 1155101 1 - 0 ID=LTnewLM_360036800.1:CDS:1;Parent=LTnewLM_360036800.1 ### LTnewLM_36 . polypeptide 1154625 1155101 . - . ID=LTnewLM_360036800.1:pep;Derives_from=LTnewLM_360036800.1;orthologous_to=LmjF.36.2750_mRNA;ortholog_cluster=OG0006369;product=term%3DAcetyltransferase (GNAT) family/Acetyltransferase (GNAT) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00583|Pfam:PF13508;Ontology_term=GO:0008080 LTnewLM_36 Pfam protein_match 1154676 1154933 . - . Parent=LTnewLM_360036800.1:pep;Name=PF13508;signature_desc=Acetyltransferase (GNAT) domain;Ontology_term=GO:0008080 LTnewLM_36 Pfam protein_match 1154679 1154966 . - . Parent=LTnewLM_360036800.1:pep;Name=PF00583;signature_desc=Acetyltransferase (GNAT) family;Ontology_term=GO:0008080 ### LTnewLM_36 AUGUSTUS gene 1159175 1160983 1 - . ID=LTnewLM_360036900 LTnewLM_36 AUGUSTUS mRNA 1159175 1160983 1 - . ID=LTnewLM_360036900.1;Parent=LTnewLM_360036900 LTnewLM_36 AUGUSTUS CDS 1159175 1160983 1 - 0 ID=LTnewLM_360036900.1:CDS:1;Parent=LTnewLM_360036900.1 ### LTnewLM_36 . polypeptide 1159175 1160983 . - . ID=LTnewLM_360036900.1:pep;Derives_from=LTnewLM_360036900.1;orthologous_to=LmjF.36.2760_mRNA;ortholog_cluster=OG0006370;product=term%3DNodulin-like/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06813|Pfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_36 Pfam protein_match 1160081 1160878 . - . Parent=LTnewLM_360036900.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 1160333 1160881 . - . Parent=LTnewLM_360036900.1:pep;Name=PF06813;signature_desc=Nodulin-like ### LTnewLM_36 AUGUSTUS gene 1161687 1161944 1 - . ID=LTnewLM_360037000 LTnewLM_36 AUGUSTUS mRNA 1161687 1161944 1 - . ID=LTnewLM_360037000.1;Parent=LTnewLM_360037000 LTnewLM_36 AUGUSTUS CDS 1161687 1161944 1 - 0 ID=LTnewLM_360037000.1:CDS:1;Parent=LTnewLM_360037000.1 ### LTnewLM_36 . polypeptide 1161687 1161944 . - . ID=LTnewLM_360037000.1:pep;Derives_from=LTnewLM_360037000.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1163065 1163412 1 - . ID=LTnewLM_360037100 LTnewLM_36 AUGUSTUS mRNA 1163065 1163412 1 - . ID=LTnewLM_360037100.1;Parent=LTnewLM_360037100 LTnewLM_36 AUGUSTUS CDS 1163065 1163412 1 - 0 ID=LTnewLM_360037100.1:CDS:1;Parent=LTnewLM_360037100.1 ### LTnewLM_36 . polypeptide 1163065 1163412 . - . ID=LTnewLM_360037100.1:pep;Derives_from=LTnewLM_360037100.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1164819 1167059 1 - . ID=LTnewLM_360037200 LTnewLM_36 AUGUSTUS mRNA 1164819 1167059 1 - . ID=LTnewLM_360037200.1;Parent=LTnewLM_360037200 LTnewLM_36 AUGUSTUS CDS 1164819 1167059 1 - 0 ID=LTnewLM_360037200.1:CDS:1;Parent=LTnewLM_360037200.1 ### LTnewLM_36 . polypeptide 1164819 1167059 . - . ID=LTnewLM_360037200.1:pep;Derives_from=LTnewLM_360037200.1;orthologous_to=LmjF.36.2770_mRNA;ortholog_cluster=OG0006371;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1168639 1170120 1 - . ID=LTnewLM_360037300 LTnewLM_36 AUGUSTUS mRNA 1168639 1170120 1 - . ID=LTnewLM_360037300.1;Parent=LTnewLM_360037300 LTnewLM_36 AUGUSTUS CDS 1168639 1170120 1 - 0 ID=LTnewLM_360037300.1:CDS:1;Parent=LTnewLM_360037300.1 ### LTnewLM_36 . polypeptide 1168639 1170120 . - . ID=LTnewLM_360037300.1:pep;Derives_from=LTnewLM_360037300.1;orthologous_to=LmjF.36.2780_mRNA;ortholog_cluster=OG0006372;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1170799 1178897 0.49 - . ID=LTnewLM_360037400 LTnewLM_36 AUGUSTUS mRNA 1170799 1178897 0.49 - . ID=LTnewLM_360037400.1;Parent=LTnewLM_360037400 LTnewLM_36 AUGUSTUS CDS 1170799 1172503 0.49 - 1 ID=LTnewLM_360037400.1:CDS:1;Parent=LTnewLM_360037400.1 LTnewLM_36 AUGUSTUS CDS 1172548 1178897 0.84 - 0 ID=LTnewLM_360037400.1:CDS:2;Parent=LTnewLM_360037400.1 ### LTnewLM_36 . polypeptide 1170799 1178897 . - . ID=LTnewLM_360037400.1:pep;Derives_from=LTnewLM_360037400.1;orthologous_to=LmjF.36.2790_mRNA;ortholog_cluster=OG0006373;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 1180306 1182892 . - . ID=LTnewLM_360037500:pseudogene;coverage=0.998;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2800_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1180306 1182892 . - . ID=LTnewLM_360037500.1;Parent=LTnewLM_360037500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1180306 1182892 . - . ID=LTnewLM_360037500.1:pseudogenic_exon:1;Parent=LTnewLM_360037500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1180306 1182892 . - . ID=LTnewLM_360037500.1:pep;Derives_from=LTnewLM_360037500.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1183463 1185400 1 - . ID=LTnewLM_360037600 LTnewLM_36 AUGUSTUS mRNA 1183463 1185400 1 - . ID=LTnewLM_360037600.1;Parent=LTnewLM_360037600 LTnewLM_36 AUGUSTUS CDS 1183463 1185400 1 - 0 ID=LTnewLM_360037600.1:CDS:1;Parent=LTnewLM_360037600.1 ### LTnewLM_36 . polypeptide 1183463 1185400 . - . ID=LTnewLM_360037600.1:pep;Derives_from=LTnewLM_360037600.1;orthologous_to=LmjF.36.2810_mRNA;ortholog_cluster=OG0006374;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1186984 1188759 1 - . ID=LTnewLM_360037700 LTnewLM_36 AUGUSTUS mRNA 1186984 1188759 1 - . ID=LTnewLM_360037700.1;Parent=LTnewLM_360037700 LTnewLM_36 AUGUSTUS CDS 1186984 1188759 1 - 0 ID=LTnewLM_360037700.1:CDS:1;Parent=LTnewLM_360037700.1 ### LTnewLM_36 . polypeptide 1186984 1188759 . - . ID=LTnewLM_360037700.1:pep;Derives_from=LTnewLM_360037700.1;orthologous_to=LmjF.36.2820_mRNA;ortholog_cluster=OG0006375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1189617 1192880 1 - . ID=LTnewLM_360037800 LTnewLM_36 AUGUSTUS mRNA 1189617 1192880 1 - . ID=LTnewLM_360037800.1;Parent=LTnewLM_360037800 LTnewLM_36 AUGUSTUS CDS 1189617 1192880 1 - 0 ID=LTnewLM_360037800.1:CDS:1;Parent=LTnewLM_360037800.1 ### LTnewLM_36 . polypeptide 1189617 1192880 . - . ID=LTnewLM_360037800.1:pep;Derives_from=LTnewLM_360037800.1;orthologous_to=LmjF.36.2830_mRNA;ortholog_cluster=OG0006376;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)/Oligonucleotide/oligosaccharide-binding (OB)-fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408|Pfam:PF07717;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1189749 1189982 . - . Parent=LTnewLM_360037800.1:pep;Name=PF07717;signature_desc=Oligonucleotide/oligosaccharide-binding (OB)-fold LTnewLM_36 Pfam protein_match 1190160 1190429 . - . Parent=LTnewLM_360037800.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_36 Pfam protein_match 1190613 1191008 . - . Parent=LTnewLM_360037800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 1191147 1191566 . - . Parent=LTnewLM_360037800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_36 AUGUSTUS gene 1194043 1197480 1 - . ID=LTnewLM_360037900 LTnewLM_36 AUGUSTUS mRNA 1194043 1197480 1 - . ID=LTnewLM_360037900.1;Parent=LTnewLM_360037900 LTnewLM_36 AUGUSTUS CDS 1194043 1197480 1 - 0 ID=LTnewLM_360037900.1:CDS:1;Parent=LTnewLM_360037900.1 ### LTnewLM_36 . polypeptide 1194043 1197480 . - . ID=LTnewLM_360037900.1:pep;Derives_from=LTnewLM_360037900.1;orthologous_to=LmjF.36.2840_mRNA;ortholog_cluster=OG0006377;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1198367 1198645 1 - . ID=LTnewLM_360038000 LTnewLM_36 AUGUSTUS mRNA 1198367 1198645 1 - . ID=LTnewLM_360038000.1;Parent=LTnewLM_360038000 LTnewLM_36 AUGUSTUS CDS 1198367 1198645 1 - 0 ID=LTnewLM_360038000.1:CDS:1;Parent=LTnewLM_360038000.1 ### LTnewLM_36 . polypeptide 1198367 1198645 . - . ID=LTnewLM_360038000.1:pep;Derives_from=LTnewLM_360038000.1;orthologous_to=LmjF.36.2845_mRNA;ortholog_cluster=OG0006378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1201896 1202678 1 - . ID=LTnewLM_360038100 LTnewLM_36 AUGUSTUS mRNA 1201896 1202678 1 - . ID=LTnewLM_360038100.1;Parent=LTnewLM_360038100 LTnewLM_36 AUGUSTUS CDS 1201896 1202678 1 - 0 ID=LTnewLM_360038100.1:CDS:1;Parent=LTnewLM_360038100.1 ### LTnewLM_36 . polypeptide 1201896 1202678 . - . ID=LTnewLM_360038100.1:pep;Derives_from=LTnewLM_360038100.1;orthologous_to=LmjF.36.2850_mRNA;ortholog_cluster=OG0006379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1204132 1204545 1 - . ID=LTnewLM_360038200 LTnewLM_36 AUGUSTUS mRNA 1204132 1204545 1 - . ID=LTnewLM_360038200.1;Parent=LTnewLM_360038200 LTnewLM_36 AUGUSTUS CDS 1204132 1204545 1 - 0 ID=LTnewLM_360038200.1:CDS:1;Parent=LTnewLM_360038200.1 ### LTnewLM_36 . polypeptide 1204132 1204545 . - . ID=LTnewLM_360038200.1:pep;Derives_from=LTnewLM_360038200.1;orthologous_to=LTnewLM_360038300.1,LmjF.36.2860_mRNA,LmjF.36.2870_mRNA;ortholog_cluster=OG0000259;product=term%3DRibosomal protein S24e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01282;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1204234 1204458 . - . Parent=LTnewLM_360038200.1:pep;Name=PF01282;signature_desc=Ribosomal protein S24e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1205388 1205801 1 - . ID=LTnewLM_360038300 LTnewLM_36 AUGUSTUS mRNA 1205388 1205801 1 - . ID=LTnewLM_360038300.1;Parent=LTnewLM_360038300 LTnewLM_36 AUGUSTUS CDS 1205388 1205801 1 - 0 ID=LTnewLM_360038300.1:CDS:1;Parent=LTnewLM_360038300.1 ### LTnewLM_36 . polypeptide 1205388 1205801 . - . ID=LTnewLM_360038300.1:pep;Derives_from=LTnewLM_360038300.1;orthologous_to=LTnewLM_360038200.1,LmjF.36.2860_mRNA,LmjF.36.2870_mRNA;ortholog_cluster=OG0000259;product=term%3DRibosomal protein S24e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01282;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1205490 1205714 . - . Parent=LTnewLM_360038300.1:pep;Name=PF01282;signature_desc=Ribosomal protein S24e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1206720 1211873 1 - . ID=LTnewLM_360038400 LTnewLM_36 AUGUSTUS mRNA 1206720 1211873 1 - . ID=LTnewLM_360038400.1;Parent=LTnewLM_360038400 LTnewLM_36 AUGUSTUS CDS 1206720 1211873 1 - 0 ID=LTnewLM_360038400.1:CDS:1;Parent=LTnewLM_360038400.1 ### LTnewLM_36 . polypeptide 1206720 1211873 . - . ID=LTnewLM_360038400.1:pep;Derives_from=LTnewLM_360038400.1;orthologous_to=LmjF.36.2880_mRNA;ortholog_cluster=OG0006380;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1213318 1215369 1 - . ID=LTnewLM_360038500 LTnewLM_36 AUGUSTUS mRNA 1213318 1215369 1 - . ID=LTnewLM_360038500.1;Parent=LTnewLM_360038500 LTnewLM_36 AUGUSTUS CDS 1213318 1215369 1 - 0 ID=LTnewLM_360038500.1:CDS:1;Parent=LTnewLM_360038500.1 ### LTnewLM_36 . polypeptide 1213318 1215369 . - . ID=LTnewLM_360038500.1:pep;Derives_from=LTnewLM_360038500.1;orthologous_to=LmjF.36.2890_mRNA;ortholog_cluster=OG0006381;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF19055|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_36 Pfam protein_match 1213522 1214154 . - . Parent=LTnewLM_360038500.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 LTnewLM_36 Pfam protein_match 1213528 1214631 . - . Parent=LTnewLM_360038500.1:pep;Name=PF19055;signature_desc=ABC-2 type transporter LTnewLM_36 Pfam protein_match 1214722 1215177 . - . Parent=LTnewLM_360038500.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_36 . pseudogene 1216576 1219448 . - . ID=LTnewLM_360038600:pseudogene;coverage=0.999;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.2900_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1216576 1219448 . - . ID=LTnewLM_360038600.1;Parent=LTnewLM_360038600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1216576 1219448 . - . ID=LTnewLM_360038600.1:pseudogenic_exon:1;Parent=LTnewLM_360038600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1216576 1219448 . - . ID=LTnewLM_360038600.1:pep;Derives_from=LTnewLM_360038600.1;orthologous_to=LmjF.36.2900_mRNA;ortholog_cluster=OG0007686;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1220738 1221778 1 - . ID=LTnewLM_360038700 LTnewLM_36 AUGUSTUS mRNA 1220738 1221778 1 - . ID=LTnewLM_360038700.1;Parent=LTnewLM_360038700 LTnewLM_36 AUGUSTUS CDS 1220738 1221778 1 - 0 ID=LTnewLM_360038700.1:CDS:1;Parent=LTnewLM_360038700.1 ### LTnewLM_36 . polypeptide 1220738 1221778 . - . ID=LTnewLM_360038700.1:pep;Derives_from=LTnewLM_360038700.1;orthologous_to=LmjF.36.2910_mRNA;ortholog_cluster=OG0006382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1222737 1223078 1 - . ID=LTnewLM_360038800 LTnewLM_36 AUGUSTUS mRNA 1222737 1223078 1 - . ID=LTnewLM_360038800.1;Parent=LTnewLM_360038800 LTnewLM_36 AUGUSTUS CDS 1222737 1223078 1 - 0 ID=LTnewLM_360038800.1:CDS:1;Parent=LTnewLM_360038800.1 ### LTnewLM_36 . polypeptide 1222737 1223078 . - . ID=LTnewLM_360038800.1:pep;Derives_from=LTnewLM_360038800.1;orthologous_to=LmjF.36.2920_mRNA;ortholog_cluster=OG0006383;product=term%3DPHF5-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03660 LTnewLM_36 Pfam protein_match 1222770 1223078 . - . Parent=LTnewLM_360038800.1:pep;Name=PF03660;signature_desc=PHF5-like protein ### LTnewLM_36 AUGUSTUS gene 1224491 1226137 1 - . ID=LTnewLM_360038900 LTnewLM_36 AUGUSTUS mRNA 1224491 1226137 1 - . ID=LTnewLM_360038900.1;Parent=LTnewLM_360038900 LTnewLM_36 AUGUSTUS CDS 1224491 1226137 1 - 0 ID=LTnewLM_360038900.1:CDS:1;Parent=LTnewLM_360038900.1 ### LTnewLM_36 . polypeptide 1224491 1226137 . - . ID=LTnewLM_360038900.1:pep;Derives_from=LTnewLM_360038900.1;orthologous_to=LmjF.36.2930_mRNA;ortholog_cluster=OG0006384;product=term%3DRing finger domain/RING-like zinc finger/RING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF17123|Pfam:PF13445|Pfam:PF13923|Pfam:PF00097;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_36 Pfam protein_match 1225106 1225231 . - . Parent=LTnewLM_360038900.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_36 Pfam protein_match 1225109 1225228 . - . Parent=LTnewLM_360038900.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_36 Pfam protein_match 1225109 1225228 . - . Parent=LTnewLM_360038900.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_36 Pfam protein_match 1225115 1225228 . - . Parent=LTnewLM_360038900.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_36 Pfam protein_match 1225148 1225228 . - . Parent=LTnewLM_360038900.1:pep;Name=PF17123;signature_desc=RING-like zinc finger ### LTnewLM_36 AUGUSTUS gene 1227205 1239741 1 - . ID=LTnewLM_360039000 LTnewLM_36 AUGUSTUS mRNA 1227205 1239741 1 - . ID=LTnewLM_360039000.1;Parent=LTnewLM_360039000 LTnewLM_36 AUGUSTUS CDS 1227205 1239741 1 - 0 ID=LTnewLM_360039000.1:CDS:1;Parent=LTnewLM_360039000.1 ### LTnewLM_36 . polypeptide 1227205 1239741 . - . ID=LTnewLM_360039000.1:pep;Derives_from=LTnewLM_360039000.1;orthologous_to=LmjF.36.2940_mRNA;ortholog_cluster=OG0006385;product=term%3DPhosphatidylinositol 3- and 4-kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00454;Ontology_term=GO:0016773 LTnewLM_36 Pfam protein_match 1227571 1228272 . - . Parent=LTnewLM_360039000.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 ### LTnewLM_36 AUGUSTUS gene 1243262 1244503 1 - . ID=LTnewLM_360039100 LTnewLM_36 AUGUSTUS mRNA 1243262 1244503 1 - . ID=LTnewLM_360039100.1;Parent=LTnewLM_360039100 LTnewLM_36 AUGUSTUS CDS 1243262 1244503 1 - 0 ID=LTnewLM_360039100.1:CDS:1;Parent=LTnewLM_360039100.1 ### LTnewLM_36 . polypeptide 1243262 1244503 . - . ID=LTnewLM_360039100.1:pep;Derives_from=LTnewLM_360039100.1;orthologous_to=LmjF.36.2950_mRNA;ortholog_cluster=OG0006386;product=term%3DATP-grasp domain/CoA-ligase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08442|Pfam:PF00549;Ontology_term=GO:0003824,GO:0008152 LTnewLM_36 Pfam protein_match 1243280 1243639 . - . Parent=LTnewLM_360039100.1:pep;Name=PF00549;signature_desc=CoA-ligase;Ontology_term=GO:0003824,GO:0008152 LTnewLM_36 Pfam protein_match 1243817 1244443 . - . Parent=LTnewLM_360039100.1:pep;Name=PF08442;signature_desc=ATP-grasp domain ### LTnewLM_36 AUGUSTUS gene 1245249 1245647 1 - . ID=LTnewLM_360039200 LTnewLM_36 AUGUSTUS mRNA 1245249 1245647 1 - . ID=LTnewLM_360039200.1;Parent=LTnewLM_360039200 LTnewLM_36 AUGUSTUS CDS 1245249 1245647 1 - 0 ID=LTnewLM_360039200.1:CDS:1;Parent=LTnewLM_360039200.1 ### LTnewLM_36 . polypeptide 1245249 1245647 . - . ID=LTnewLM_360039200.1:pep;Derives_from=LTnewLM_360039200.1;orthologous_to=LmjF.36.2960_mRNA;ortholog_cluster=OG0006387;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1246457 1246972 1 - . ID=LTnewLM_360039300 LTnewLM_36 AUGUSTUS mRNA 1246457 1246972 1 - . ID=LTnewLM_360039300.1;Parent=LTnewLM_360039300 LTnewLM_36 AUGUSTUS CDS 1246457 1246972 1 - 0 ID=LTnewLM_360039300.1:CDS:1;Parent=LTnewLM_360039300.1 ### LTnewLM_36 . polypeptide 1246457 1246972 . - . ID=LTnewLM_360039300.1:pep;Derives_from=LTnewLM_360039300.1;orthologous_to=LmjF.36.2970_mRNA;ortholog_cluster=OG0006388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1248569 1248904 0.8 - . ID=LTnewLM_360039400 LTnewLM_36 AUGUSTUS mRNA 1248569 1248904 0.8 - . ID=LTnewLM_360039400.1;Parent=LTnewLM_360039400 LTnewLM_36 AUGUSTUS CDS 1248569 1248904 0.8 - 0 ID=LTnewLM_360039400.1:CDS:1;Parent=LTnewLM_360039400.1 ### LTnewLM_36 . polypeptide 1248569 1248904 . - . ID=LTnewLM_360039400.1:pep;Derives_from=LTnewLM_360039400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1250980 1251690 1 - . ID=LTnewLM_360039500 LTnewLM_36 AUGUSTUS mRNA 1250980 1251690 1 - . ID=LTnewLM_360039500.1;Parent=LTnewLM_360039500 LTnewLM_36 AUGUSTUS CDS 1250980 1251690 1 - 0 ID=LTnewLM_360039500.1:CDS:1;Parent=LTnewLM_360039500.1 ### LTnewLM_36 . polypeptide 1250980 1251690 . - . ID=LTnewLM_360039500.1:pep;Derives_from=LTnewLM_360039500.1;orthologous_to=LmjF.36.2980_mRNA;ortholog_cluster=OG0006389;product=term%3DBromodomain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00439;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1251400 1251645 . - . Parent=LTnewLM_360039500.1:pep;Name=PF00439;signature_desc=Bromodomain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1252517 1253980 1 - . ID=LTnewLM_360039600 LTnewLM_36 AUGUSTUS mRNA 1252517 1253980 1 - . ID=LTnewLM_360039600.1;Parent=LTnewLM_360039600 LTnewLM_36 AUGUSTUS CDS 1252517 1253980 1 - 0 ID=LTnewLM_360039600.1:CDS:1;Parent=LTnewLM_360039600.1 ### LTnewLM_36 . polypeptide 1252517 1253980 . - . ID=LTnewLM_360039600.1:pep;Derives_from=LTnewLM_360039600.1;orthologous_to=LmjF.36.2990_mRNA;ortholog_cluster=OG0006390;product=term%3DGTP1/OBG/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01018|Pfam:PF01926;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 1253201 1253458 . - . Parent=LTnewLM_360039600.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 1253471 1253935 . - . Parent=LTnewLM_360039600.1:pep;Name=PF01018;signature_desc=GTP1/OBG;Ontology_term=GO:0005525 ### LTnewLM_36 Liftoff gene 1254822 1257728 . - . ID=LTnewLM_360039700;coverage=1.0;sequence_ID=0.970;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3000_0 LTnewLM_36 Liftoff mRNA 1254822 1257728 . - . ID=LTnewLM_360039700.1;Parent=LTnewLM_360039700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1254822 1257728 . - 0 ID=LTnewLM_360039700.1:CDS:1;Parent=LTnewLM_360039700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1254822 1257728 . - . ID=LTnewLM_360039700.1:pep;Derives_from=LTnewLM_360039700.1;orthologous_to=LmjF.36.3000_mRNA;ortholog_cluster=OG0006391;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain/rRNA-processing arch domain/DSHCT (NUC185) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271|Pfam:PF13234|Pfam:PF08148;Ontology_term=GO:0016818,GO:0005524,GO:0016787,GO:0003676,GO:0003677 LTnewLM_36 Pfam protein_match 1254843 1255358 . - . Parent=LTnewLM_360039700.1:pep;Name=PF08148;signature_desc=DSHCT (NUC185) domain;Ontology_term=GO:0005524,GO:0016818 LTnewLM_36 Pfam protein_match 1255446 1256225 . - . Parent=LTnewLM_360039700.1:pep;Name=PF13234;signature_desc=rRNA-processing arch domain LTnewLM_36 Pfam protein_match 1256388 1256699 . - . Parent=LTnewLM_360039700.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 1257162 1257596 . - . Parent=LTnewLM_360039700.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1257165 1257569 . - . Parent=LTnewLM_360039700.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_36 AUGUSTUS gene 1258161 1258619 1 - . ID=LTnewLM_360039800 LTnewLM_36 AUGUSTUS mRNA 1258161 1258619 1 - . ID=LTnewLM_360039800.1;Parent=LTnewLM_360039800 LTnewLM_36 AUGUSTUS CDS 1258161 1258619 1 - 0 ID=LTnewLM_360039800.1:CDS:1;Parent=LTnewLM_360039800.1 ### LTnewLM_36 . polypeptide 1258161 1258619 . - . ID=LTnewLM_360039800.1:pep;Derives_from=LTnewLM_360039800.1;orthologous_to=LmjF.36.3010_mRNA;ortholog_cluster=OG0006392;product=term%3DGlutathione peroxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00255;Ontology_term=GO:0006979,GO:0004602,GO:0055114 LTnewLM_36 Pfam protein_match 1258293 1258604 . - . Parent=LTnewLM_360039800.1:pep;Name=PF00255;signature_desc=Glutathione peroxidase;Ontology_term=GO:0004602,GO:0006979,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 1259464 1260204 1 - . ID=LTnewLM_360039900 LTnewLM_36 AUGUSTUS mRNA 1259464 1260204 1 - . ID=LTnewLM_360039900.1;Parent=LTnewLM_360039900 LTnewLM_36 AUGUSTUS CDS 1259464 1260204 1 - 0 ID=LTnewLM_360039900.1:CDS:1;Parent=LTnewLM_360039900.1 ### LTnewLM_36 . polypeptide 1259464 1260204 . - . ID=LTnewLM_360039900.1:pep;Derives_from=LTnewLM_360039900.1;orthologous_to=LmjF.36.3020_mRNA;ortholog_cluster=OG0006393;product=term%3D3' exoribonuclease family%2C domain 1/3' exoribonuclease family%2C domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01138|Pfam:PF03725 LTnewLM_36 Pfam protein_match 1259545 1259742 . - . Parent=LTnewLM_360039900.1:pep;Name=PF03725;signature_desc=3' exoribonuclease family%2C domain 2 LTnewLM_36 Pfam protein_match 1259755 1260141 . - . Parent=LTnewLM_360039900.1:pep;Name=PF01138;signature_desc=3' exoribonuclease family%2C domain 1 ### LTnewLM_36 AUGUSTUS gene 1260780 1261004 1 - . ID=LTnewLM_360040000 LTnewLM_36 AUGUSTUS mRNA 1260780 1261004 1 - . ID=LTnewLM_360040000.1;Parent=LTnewLM_360040000 LTnewLM_36 AUGUSTUS CDS 1260780 1261004 1 - 0 ID=LTnewLM_360040000.1:CDS:1;Parent=LTnewLM_360040000.1 ### LTnewLM_36 . polypeptide 1260780 1261004 . - . ID=LTnewLM_360040000.1:pep;Derives_from=LTnewLM_360040000.1;product=term%3DSwi5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07061 LTnewLM_36 Pfam protein_match 1260819 1260932 . - . Parent=LTnewLM_360040000.1:pep;Name=PF07061;signature_desc=Swi5 ### LTnewLM_36 AUGUSTUS gene 1262008 1263324 1 - . ID=LTnewLM_360040100 LTnewLM_36 AUGUSTUS mRNA 1262008 1263324 1 - . ID=LTnewLM_360040100.1;Parent=LTnewLM_360040100 LTnewLM_36 AUGUSTUS CDS 1262008 1263324 1 - 0 ID=LTnewLM_360040100.1:CDS:1;Parent=LTnewLM_360040100.1 ### LTnewLM_36 . polypeptide 1262008 1263324 . - . ID=LTnewLM_360040100.1:pep;Derives_from=LTnewLM_360040100.1;orthologous_to=LmjF.36.3030_mRNA;ortholog_cluster=OG0006394;product=term%3DAdaptor complexes medium subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00928;Ontology_term=GO:0016192,GO:0005515,GO:0006886,GO:0030131 LTnewLM_36 Pfam protein_match 1262014 1262841 . - . Parent=LTnewLM_360040100.1:pep;Name=PF00928;signature_desc=Adaptor complexes medium subunit family;Ontology_term=GO:0005515,GO:0006886,GO:0016192,GO:0030131 ### LTnewLM_36 AUGUSTUS gene 1263792 1264148 1 - . ID=LTnewLM_360040200 LTnewLM_36 AUGUSTUS mRNA 1263792 1264148 1 - . ID=LTnewLM_360040200.1;Parent=LTnewLM_360040200 LTnewLM_36 AUGUSTUS CDS 1263792 1264148 1 - 0 ID=LTnewLM_360040200.1:CDS:1;Parent=LTnewLM_360040200.1 ### LTnewLM_36 . polypeptide 1263792 1264148 . - . ID=LTnewLM_360040200.1:pep;Derives_from=LTnewLM_360040200.1;orthologous_to=LmjF.36.3040_mRNA;ortholog_cluster=OG0006395;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13893|Pfam:PF00076;Ontology_term=GO:0003676 LTnewLM_36 Pfam protein_match 1263918 1264145 . - . Parent=LTnewLM_360040200.1:pep;Name=PF13893;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) LTnewLM_36 Pfam protein_match 1263945 1264127 . - . Parent=LTnewLM_360040200.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_36 AUGUSTUS gene 1264732 1265361 1 - . ID=LTnewLM_360040300 LTnewLM_36 AUGUSTUS mRNA 1264732 1265361 1 - . ID=LTnewLM_360040300.1;Parent=LTnewLM_360040300 LTnewLM_36 AUGUSTUS CDS 1264732 1265361 1 - 0 ID=LTnewLM_360040300.1:CDS:1;Parent=LTnewLM_360040300.1 ### LTnewLM_36 . polypeptide 1264732 1265361 . - . ID=LTnewLM_360040300.1:pep;Derives_from=LTnewLM_360040300.1;orthologous_to=LmjF.36.3050_mRNA;ortholog_cluster=OG0006396;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 1265833 1266561 . - . ID=LTnewLM_360040400.1:pep;Derives_from=LTnewLM_360040400.1;orthologous_to=LmjF.36.3060.1_mRNA;ortholog_cluster=OG0006397;product=term%3DCullin family/Cullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888|Pfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_36 Pfam protein_match 1265863 1266042 . - . Parent=LTnewLM_360040400.1:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 LTnewLM_36 Pfam protein_match 1266202 1266546 . - . Parent=LTnewLM_360040400.1:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_36 . polypeptide 1265833 1267953 . - . ID=LTnewLM_360040400.2:pep;Derives_from=LTnewLM_360040400.2;orthologous_to=LmjF.36.3060.2_mRNA;ortholog_cluster=OG0006398;product=term%3DCullin family/Cullin protein neddylation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00888|Pfam:PF10557;Ontology_term=GO:0031461,GO:0031625,GO:0006511 LTnewLM_36 Pfam protein_match 1265863 1266042 . - . Parent=LTnewLM_360040400.2:pep;Name=PF10557;signature_desc=Cullin protein neddylation domain;Ontology_term=GO:0031625,GO:0006511,GO:0031461 LTnewLM_36 Pfam protein_match 1266202 1267893 . - . Parent=LTnewLM_360040400.2:pep;Name=PF00888;signature_desc=Cullin family;Ontology_term=GO:0031625,GO:0006511,GO:0031461 ### LTnewLM_36 Liftoff gene 1265833 1268050 . - . ID=LTnewLM_360040400;coverage=0.999;sequence_ID=0.951;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.36.3060_0 LTnewLM_36 Liftoff mRNA 1265833 1266608 . - . ID=LTnewLM_360040400.1;Parent=LTnewLM_360040400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1265833 1266561 . - 0 ID=LTnewLM_360040400.1:CDS:1;Parent=LTnewLM_360040400.1;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 1266562 1266608 . - . ID=LTnewLM_360040400:five_prime_UTR;Parent=LTnewLM_360040400.1;extra_copy_number=0 LTnewLM_36 Liftoff mRNA 1265833 1268050 . - . ID=LTnewLM_360040400.2;Parent=LTnewLM_360040400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1265833 1267953 . - 0 ID=LTnewLM_360040400.2:CDS:1;Parent=LTnewLM_360040400.2;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 1267954 1268050 . - . ID=LTnewLM_360040400:five_prime_UTR.1;Parent=LTnewLM_360040400.2;extra_copy_number=0 ### LTnewLM_36 AUGUSTUS gene 1268816 1269694 1 - . ID=LTnewLM_360040500 LTnewLM_36 AUGUSTUS mRNA 1268816 1269694 1 - . ID=LTnewLM_360040500.1;Parent=LTnewLM_360040500 LTnewLM_36 AUGUSTUS CDS 1268816 1269694 1 - 0 ID=LTnewLM_360040500.1:CDS:1;Parent=LTnewLM_360040500.1 ### LTnewLM_36 . polypeptide 1268816 1269694 . - . ID=LTnewLM_360040500.1:pep;Derives_from=LTnewLM_360040500.1;orthologous_to=LmjF.36.3070_mRNA;ortholog_cluster=OG0006399;product=term%3DFibrillarin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01269;Ontology_term=GO:0003723,GO:0008033,GO:0006364,GO:0008168 LTnewLM_36 Pfam protein_match 1268843 1269532 . - . Parent=LTnewLM_360040500.1:pep;Name=PF01269;signature_desc=Fibrillarin;Ontology_term=GO:0003723,GO:0008168,GO:0006364,GO:0008033 ### LTnewLM_36 AUGUSTUS gene 1270569 1271366 1 - . ID=LTnewLM_360040600 LTnewLM_36 AUGUSTUS mRNA 1270569 1271366 1 - . ID=LTnewLM_360040600.1;Parent=LTnewLM_360040600 LTnewLM_36 AUGUSTUS CDS 1270569 1271366 1 - 0 ID=LTnewLM_360040600.1:CDS:1;Parent=LTnewLM_360040600.1 ### LTnewLM_36 . polypeptide 1270569 1271366 . - . ID=LTnewLM_360040600.1:pep;Derives_from=LTnewLM_360040600.1;orthologous_to=LmjF.36.3080_mRNA;ortholog_cluster=OG0006400;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1271929 1274397 1 - . ID=LTnewLM_360040700 LTnewLM_36 AUGUSTUS mRNA 1271929 1274397 1 - . ID=LTnewLM_360040700.1;Parent=LTnewLM_360040700 LTnewLM_36 AUGUSTUS CDS 1271929 1274397 1 - 0 ID=LTnewLM_360040700.1:CDS:1;Parent=LTnewLM_360040700.1 ### LTnewLM_36 . polypeptide 1271929 1274397 . - . ID=LTnewLM_360040700.1:pep;Derives_from=LTnewLM_360040700.1;orthologous_to=LmjF.36.3090_mRNA;ortholog_cluster=OG0006401;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1275573 1276163 0.98 - . ID=LTnewLM_360040800 LTnewLM_36 AUGUSTUS mRNA 1275573 1276163 0.98 - . ID=LTnewLM_360040800.1;Parent=LTnewLM_360040800 LTnewLM_36 AUGUSTUS CDS 1275573 1276163 0.98 - 0 ID=LTnewLM_360040800.1:CDS:1;Parent=LTnewLM_360040800.1 ### LTnewLM_36 . polypeptide 1275573 1276163 . - . ID=LTnewLM_360040800.1:pep;Derives_from=LTnewLM_360040800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1277717 1278367 1 - . ID=LTnewLM_360040900 LTnewLM_36 AUGUSTUS mRNA 1277717 1278367 1 - . ID=LTnewLM_360040900.1;Parent=LTnewLM_360040900 LTnewLM_36 AUGUSTUS CDS 1277717 1278367 1 - 0 ID=LTnewLM_360040900.1:CDS:1;Parent=LTnewLM_360040900.1 ### LTnewLM_36 . polypeptide 1277717 1278367 . - . ID=LTnewLM_360040900.1:pep;Derives_from=LTnewLM_360040900.1;orthologous_to=LmjF.36.3100_mRNA;ortholog_cluster=OG0006402;product=term%3DATP synthase (E/31 kDa) subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01991;Ontology_term=GO:0046961,GO:0015991,GO:0033178 LTnewLM_36 Pfam protein_match 1277741 1278331 . - . Parent=LTnewLM_360040900.1:pep;Name=PF01991;signature_desc=ATP synthase (E/31 kDa) subunit;Ontology_term=GO:0046961,GO:0015991,GO:0033178 ### LTnewLM_36 AUGUSTUS gene 1279001 1279366 1 - . ID=LTnewLM_360041000 LTnewLM_36 AUGUSTUS mRNA 1279001 1279366 1 - . ID=LTnewLM_360041000.1;Parent=LTnewLM_360041000 LTnewLM_36 AUGUSTUS CDS 1279001 1279366 1 - 0 ID=LTnewLM_360041000.1:CDS:1;Parent=LTnewLM_360041000.1 ### LTnewLM_36 . polypeptide 1279001 1279366 . - . ID=LTnewLM_360041000.1:pep;Derives_from=LTnewLM_360041000.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1279981 1281114 1 - . ID=LTnewLM_360041100 LTnewLM_36 AUGUSTUS mRNA 1279981 1281114 1 - . ID=LTnewLM_360041100.1;Parent=LTnewLM_360041100 LTnewLM_36 AUGUSTUS CDS 1279981 1281114 1 - 0 ID=LTnewLM_360041100.1:CDS:1;Parent=LTnewLM_360041100.1 ### LTnewLM_36 . polypeptide 1279981 1281114 . - . ID=LTnewLM_360041100.1:pep;Derives_from=LTnewLM_360041100.1;orthologous_to=LmjF.36.3110_mRNA;ortholog_cluster=OG0006403;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1282031 1283737 1 - . ID=LTnewLM_360041200 LTnewLM_36 AUGUSTUS mRNA 1282031 1283737 1 - . ID=LTnewLM_360041200.1;Parent=LTnewLM_360041200 LTnewLM_36 AUGUSTUS CDS 1282031 1283737 1 - 0 ID=LTnewLM_360041200.1:CDS:1;Parent=LTnewLM_360041200.1 ### LTnewLM_36 . polypeptide 1282031 1283737 . - . ID=LTnewLM_360041200.1:pep;Derives_from=LTnewLM_360041200.1;orthologous_to=LmjF.36.3120_mRNA;ortholog_cluster=OG0006404;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1284654 1285454 1 - . ID=LTnewLM_360041300 LTnewLM_36 AUGUSTUS mRNA 1284654 1285454 1 - . ID=LTnewLM_360041300.1;Parent=LTnewLM_360041300 LTnewLM_36 AUGUSTUS CDS 1284654 1285454 1 - 0 ID=LTnewLM_360041300.1:CDS:1;Parent=LTnewLM_360041300.1 ### LTnewLM_36 . polypeptide 1284654 1285454 . - . ID=LTnewLM_360041300.1:pep;Derives_from=LTnewLM_360041300.1;orthologous_to=LmjF.36.3130_mRNA;ortholog_cluster=OG0006405;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_36 Pfam protein_match 1284666 1285205 . - . Parent=LTnewLM_360041300.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_36 AUGUSTUS gene 1286402 1287151 1 - . ID=LTnewLM_360041400 LTnewLM_36 AUGUSTUS mRNA 1286402 1287151 1 - . ID=LTnewLM_360041400.1;Parent=LTnewLM_360041400 LTnewLM_36 AUGUSTUS CDS 1286402 1287151 1 - 0 ID=LTnewLM_360041400.1:CDS:1;Parent=LTnewLM_360041400.1 ### LTnewLM_36 . polypeptide 1286402 1287151 . - . ID=LTnewLM_360041400.1:pep;Derives_from=LTnewLM_360041400.1;orthologous_to=LmjF.36.3140_mRNA;ortholog_cluster=OG0006406;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1288094 1289359 1 - . ID=LTnewLM_360041500 LTnewLM_36 AUGUSTUS mRNA 1288094 1289359 1 - . ID=LTnewLM_360041500.1;Parent=LTnewLM_360041500 LTnewLM_36 AUGUSTUS CDS 1288094 1289359 1 - 0 ID=LTnewLM_360041500.1:CDS:1;Parent=LTnewLM_360041500.1 ### LTnewLM_36 . polypeptide 1288094 1289359 . - . ID=LTnewLM_360041500.1:pep;Derives_from=LTnewLM_360041500.1;orthologous_to=LmjF.36.3150_mRNA;ortholog_cluster=OG0006407;product=term%3DPutative GTPase activating protein for Arf%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01412;Ontology_term=GO:0008060,GO:0008270,GO:0032312 LTnewLM_36 Pfam protein_match 1289000 1289323 . - . Parent=LTnewLM_360041500.1:pep;Name=PF01412;signature_desc=Putative GTPase activating protein for Arf;Ontology_term=GO:0008060,GO:0008270,GO:0032312 ### LTnewLM_36 AUGUSTUS gene 1290301 1291308 1 - . ID=LTnewLM_360041600 LTnewLM_36 AUGUSTUS mRNA 1290301 1291308 1 - . ID=LTnewLM_360041600.1;Parent=LTnewLM_360041600 LTnewLM_36 AUGUSTUS CDS 1290301 1291308 1 - 0 ID=LTnewLM_360041600.1:CDS:1;Parent=LTnewLM_360041600.1 ### LTnewLM_36 . polypeptide 1290301 1291308 . - . ID=LTnewLM_360041600.1:pep;Derives_from=LTnewLM_360041600.1;orthologous_to=LmjF.36.3160_mRNA;ortholog_cluster=OG0006408;product=term%3DTubulin binding cofactor C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07986 LTnewLM_36 Pfam protein_match 1290574 1290798 . - . Parent=LTnewLM_360041600.1:pep;Name=PF07986;signature_desc=Tubulin binding cofactor C ### LTnewLM_36 AUGUSTUS gene 1292031 1293065 1 - . ID=LTnewLM_360041700 LTnewLM_36 AUGUSTUS mRNA 1292031 1293065 1 - . ID=LTnewLM_360041700.1;Parent=LTnewLM_360041700 LTnewLM_36 AUGUSTUS CDS 1292031 1293065 1 - 0 ID=LTnewLM_360041700.1:CDS:1;Parent=LTnewLM_360041700.1 ### LTnewLM_36 . polypeptide 1292031 1293065 . - . ID=LTnewLM_360041700.1:pep;Derives_from=LTnewLM_360041700.1;orthologous_to=LmjF.36.3170_mRNA;ortholog_cluster=OG0006409;product=term%3DCobW/HypB/UreG%2C nucleotide-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02492 LTnewLM_36 Pfam protein_match 1292469 1293020 . - . Parent=LTnewLM_360041700.1:pep;Name=PF02492;signature_desc=CobW/HypB/UreG%2C nucleotide-binding domain ### LTnewLM_36 . pseudogene 1296869 1301316 . - . ID=LTnewLM_360041800:pseudogene;coverage=0.998;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3180_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1296869 1301316 . - . ID=LTnewLM_360041800.1;Parent=LTnewLM_360041800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1296869 1301316 . - . ID=LTnewLM_360041800.1:pseudogenic_exon:1;Parent=LTnewLM_360041800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1296869 1301316 . - . ID=LTnewLM_360041800.1:pep;Derives_from=LTnewLM_360041800.1;orthologous_to=LTnewLM_000005000.1,LTnewLM_000007300.1,LTnewLM_000007400.1,LTnewLM_000007500.1,LTnewLM_170007500.1,LTnewLM_170007600.1,LTnewLM_170007700.1,LTnewLM_170007800.1,LTnewLM_170007900.1;ortholog_cluster=OG0000015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1302553 1302882 1 - . ID=LTnewLM_360041900 LTnewLM_36 AUGUSTUS mRNA 1302553 1302882 1 - . ID=LTnewLM_360041900.1;Parent=LTnewLM_360041900 LTnewLM_36 AUGUSTUS CDS 1302553 1302882 1 - 0 ID=LTnewLM_360041900.1:CDS:1;Parent=LTnewLM_360041900.1 ### LTnewLM_36 . polypeptide 1302553 1302882 . - . ID=LTnewLM_360041900.1:pep;Derives_from=LTnewLM_360041900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1304821 1306542 1 - . ID=LTnewLM_360042000 LTnewLM_36 AUGUSTUS mRNA 1304821 1306542 1 - . ID=LTnewLM_360042000.1;Parent=LTnewLM_360042000 LTnewLM_36 AUGUSTUS CDS 1304821 1306542 1 - 0 ID=LTnewLM_360042000.1:CDS:1;Parent=LTnewLM_360042000.1 ### LTnewLM_36 . polypeptide 1304821 1306542 . - . ID=LTnewLM_360042000.1:pep;Derives_from=LTnewLM_360042000.1;orthologous_to=LmjF.36.3190_mRNA;ortholog_cluster=OG0006410;product=term%3DZinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00098;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 1305919 1305969 . - . Parent=LTnewLM_360042000.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 1306291 1306341 . - . Parent=LTnewLM_360042000.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_36 Pfam protein_match 1306345 1306392 . - . Parent=LTnewLM_360042000.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 ### LTnewLM_36 AUGUSTUS gene 1307735 1310578 1 - . ID=LTnewLM_360042100 LTnewLM_36 AUGUSTUS mRNA 1307735 1310578 1 - . ID=LTnewLM_360042100.1;Parent=LTnewLM_360042100 LTnewLM_36 AUGUSTUS CDS 1307735 1310578 1 - 0 ID=LTnewLM_360042100.1:CDS:1;Parent=LTnewLM_360042100.1 ### LTnewLM_36 . polypeptide 1307735 1310578 . - . ID=LTnewLM_360042100.1:pep;Derives_from=LTnewLM_360042100.1;orthologous_to=LmjF.36.3200_mRNA;ortholog_cluster=OG0006411;product=term%3DToprim domain/DNA topoisomerase/GRF zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01751|Pfam:PF01131|Pfam:PF06839;Ontology_term=GO:0008270,GO:0006265,GO:0003916,GO:0003677 LTnewLM_36 Pfam protein_match 1307741 1307854 . - . Parent=LTnewLM_360042100.1:pep;Name=PF06839;signature_desc=GRF zinc finger;Ontology_term=GO:0008270 LTnewLM_36 Pfam protein_match 1308863 1310098 . - . Parent=LTnewLM_360042100.1:pep;Name=PF01131;signature_desc=DNA topoisomerase;Ontology_term=GO:0003677,GO:0003916,GO:0006265 LTnewLM_36 Pfam protein_match 1310150 1310566 . - . Parent=LTnewLM_360042100.1:pep;Name=PF01751;signature_desc=Toprim domain ### LTnewLM_36 AUGUSTUS gene 1314181 1314957 1 - . ID=LTnewLM_360042200 LTnewLM_36 AUGUSTUS mRNA 1314181 1314957 1 - . ID=LTnewLM_360042200.1;Parent=LTnewLM_360042200 LTnewLM_36 AUGUSTUS CDS 1314181 1314957 1 - 0 ID=LTnewLM_360042200.1:CDS:1;Parent=LTnewLM_360042200.1 ### LTnewLM_36 . polypeptide 1314181 1314957 . - . ID=LTnewLM_360042200.1:pep;Derives_from=LTnewLM_360042200.1;orthologous_to=LmjF.36.3210_mRNA;ortholog_cluster=OG0006412;product=term%3D14-3-3 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00244 LTnewLM_36 Pfam protein_match 1314199 1314855 . - . Parent=LTnewLM_360042200.1:pep;Name=PF00244;signature_desc=14-3-3 protein ### LTnewLM_36 AUGUSTUS gene 1315680 1317332 1 - . ID=LTnewLM_360042300 LTnewLM_36 AUGUSTUS mRNA 1315680 1317332 1 - . ID=LTnewLM_360042300.1;Parent=LTnewLM_360042300 LTnewLM_36 AUGUSTUS CDS 1315680 1317332 1 - 0 ID=LTnewLM_360042300.1:CDS:1;Parent=LTnewLM_360042300.1 ### LTnewLM_36 . polypeptide 1315680 1317332 . - . ID=LTnewLM_360042300.1:pep;Derives_from=LTnewLM_360042300.1;orthologous_to=LmjF.36.3220_mRNA;ortholog_cluster=OG0006413;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1318870 1320480 1 - . ID=LTnewLM_360042400 LTnewLM_36 AUGUSTUS mRNA 1318870 1320480 1 - . ID=LTnewLM_360042400.1;Parent=LTnewLM_360042400 LTnewLM_36 AUGUSTUS CDS 1318870 1320480 1 - 0 ID=LTnewLM_360042400.1:CDS:1;Parent=LTnewLM_360042400.1 ### LTnewLM_36 . polypeptide 1318870 1320480 . - . ID=LTnewLM_360042400.1:pep;Derives_from=LTnewLM_360042400.1;orthologous_to=LmjF.36.3230_mRNA;ortholog_cluster=OG0006414;product=term%3DGMC oxidoreductase/FAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00732|Pfam:PF00890|Pfam:PF05199;Ontology_term=GO:0055114,GO:0050660,GO:0016614 LTnewLM_36 Pfam protein_match 1318894 1319331 . - . Parent=LTnewLM_360042400.1:pep;Name=PF05199;signature_desc=GMC oxidoreductase;Ontology_term=GO:0016614,GO:0055114 LTnewLM_36 Pfam protein_match 1319620 1320468 . - . Parent=LTnewLM_360042400.1:pep;Name=PF00732;signature_desc=GMC oxidoreductase;Ontology_term=GO:0016614,GO:0050660,GO:0055114 LTnewLM_36 Pfam protein_match 1320364 1320465 . - . Parent=LTnewLM_360042400.1:pep;Name=PF00890;signature_desc=FAD binding domain ### LTnewLM_36 AUGUSTUS gene 1321134 1322057 1 - . ID=LTnewLM_360042500 LTnewLM_36 AUGUSTUS mRNA 1321134 1322057 1 - . ID=LTnewLM_360042500.1;Parent=LTnewLM_360042500 LTnewLM_36 AUGUSTUS CDS 1321134 1322057 1 - 0 ID=LTnewLM_360042500.1:CDS:1;Parent=LTnewLM_360042500.1 ### LTnewLM_36 . polypeptide 1321134 1322057 . - . ID=LTnewLM_360042500.1:pep;Derives_from=LTnewLM_360042500.1;orthologous_to=LmjF.36.3235_mRNA;ortholog_cluster=OG0006415;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1323102 1325663 1 - . ID=LTnewLM_360042600 LTnewLM_36 AUGUSTUS mRNA 1323102 1325663 1 - . ID=LTnewLM_360042600.1;Parent=LTnewLM_360042600 LTnewLM_36 AUGUSTUS CDS 1323102 1325663 1 - 0 ID=LTnewLM_360042600.1:CDS:1;Parent=LTnewLM_360042600.1 ### LTnewLM_36 . polypeptide 1323102 1325663 . - . ID=LTnewLM_360042600.1:pep;Derives_from=LTnewLM_360042600.1;orthologous_to=LmjF.36.3240_mRNA;ortholog_cluster=OG0006416;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1327288 1328835 1 - . ID=LTnewLM_360042700 LTnewLM_36 AUGUSTUS mRNA 1327288 1328835 1 - . ID=LTnewLM_360042700.1;Parent=LTnewLM_360042700 LTnewLM_36 AUGUSTUS CDS 1327288 1328835 1 - 0 ID=LTnewLM_360042700.1:CDS:1;Parent=LTnewLM_360042700.1 ### LTnewLM_36 . polypeptide 1327288 1328835 . - . ID=LTnewLM_360042700.1:pep;Derives_from=LTnewLM_360042700.1;orthologous_to=LmjF.36.3250_mRNA;ortholog_cluster=OG0006417;product=term%3DFirst Longin domain of INTU%2C CCZ1 and HPS4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19031 LTnewLM_36 Pfam protein_match 1328476 1328793 . - . Parent=LTnewLM_360042700.1:pep;Name=PF19031;signature_desc=First Longin domain of INTU%2C CCZ1 and HPS4 ### LTnewLM_36 AUGUSTUS gene 1329561 1330145 1 - . ID=LTnewLM_360042800 LTnewLM_36 AUGUSTUS mRNA 1329561 1330145 1 - . ID=LTnewLM_360042800.1;Parent=LTnewLM_360042800 LTnewLM_36 AUGUSTUS CDS 1329561 1330145 1 - 0 ID=LTnewLM_360042800.1:CDS:1;Parent=LTnewLM_360042800.1 ### LTnewLM_36 . polypeptide 1329561 1330145 . - . ID=LTnewLM_360042800.1:pep;Derives_from=LTnewLM_360042800.1;orthologous_to=LmjF.36.3260_mRNA;ortholog_cluster=OG0006418;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1331049 1331438 1 - . ID=LTnewLM_360042900 LTnewLM_36 AUGUSTUS mRNA 1331049 1331438 1 - . ID=LTnewLM_360042900.1;Parent=LTnewLM_360042900 LTnewLM_36 AUGUSTUS CDS 1331049 1331438 1 - 0 ID=LTnewLM_360042900.1:CDS:1;Parent=LTnewLM_360042900.1 ### LTnewLM_36 . polypeptide 1331049 1331438 . - . ID=LTnewLM_360042900.1:pep;Derives_from=LTnewLM_360042900.1;orthologous_to=LmjF.36.3270_mRNA,LmjF.36.4420_mRNA;ortholog_cluster=OG0000481;product=term%3DRibosomal L22e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01776;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1331055 1331372 . - . Parent=LTnewLM_360042900.1:pep;Name=PF01776;signature_desc=Ribosomal L22e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1333294 1336806 1 - . ID=LTnewLM_360043000 LTnewLM_36 AUGUSTUS mRNA 1333294 1336806 1 - . ID=LTnewLM_360043000.1;Parent=LTnewLM_360043000 LTnewLM_36 AUGUSTUS CDS 1333294 1336806 1 - 0 ID=LTnewLM_360043000.1:CDS:1;Parent=LTnewLM_360043000.1 ### LTnewLM_36 . polypeptide 1333294 1336806 . - . ID=LTnewLM_360043000.1:pep;Derives_from=LTnewLM_360043000.1;orthologous_to=LmjF.36.3280_mRNA;ortholog_cluster=OG0006419;product=term%3DEnoyl-CoA hydratase/isomerase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16113|Pfam:PF00378;Ontology_term=GO:0003824,GO:0008152 LTnewLM_36 Pfam protein_match 1335178 1336053 . - . Parent=LTnewLM_360043000.1:pep;Name=PF16113;signature_desc=Enoyl-CoA hydratase/isomerase LTnewLM_36 Pfam protein_match 1335433 1335744 . - . Parent=LTnewLM_360043000.1:pep;Name=PF00378;signature_desc=Enoyl-CoA hydratase/isomerase;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_36 AUGUSTUS gene 1337743 1338573 1 - . ID=LTnewLM_360043100 LTnewLM_36 AUGUSTUS mRNA 1337743 1338573 1 - . ID=LTnewLM_360043100.1;Parent=LTnewLM_360043100 LTnewLM_36 AUGUSTUS CDS 1337743 1338573 1 - 0 ID=LTnewLM_360043100.1:CDS:1;Parent=LTnewLM_360043100.1 ### LTnewLM_36 . polypeptide 1337743 1338573 . - . ID=LTnewLM_360043100.1:pep;Derives_from=LTnewLM_360043100.1;orthologous_to=LmjF.36.3290_mRNA;ortholog_cluster=OG0006420;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1339352 1339879 1 - . ID=LTnewLM_360043200 LTnewLM_36 AUGUSTUS mRNA 1339352 1339879 1 - . ID=LTnewLM_360043200.1;Parent=LTnewLM_360043200 LTnewLM_36 AUGUSTUS CDS 1339352 1339879 1 - 0 ID=LTnewLM_360043200.1:CDS:1;Parent=LTnewLM_360043200.1 ### LTnewLM_36 . polypeptide 1339352 1339879 . - . ID=LTnewLM_360043200.1:pep;Derives_from=LTnewLM_360043200.1;product=term%3Dhypothetical protein ### LTnewLM_36 . pseudogene 1340847 1343309 . - . ID=LTnewLM_360043300:pseudogene;coverage=1.0;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3300_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1340847 1343309 . - . ID=LTnewLM_360043300.1;Parent=LTnewLM_360043300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1340847 1343309 . - . ID=LTnewLM_360043300.1:pseudogenic_exon:1;Parent=LTnewLM_360043300.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1340847 1343309 . - . ID=LTnewLM_360043300.1:pep;Derives_from=LTnewLM_360043300.1;orthologous_to=LmjF.36.3300_mRNA;ortholog_cluster=OG0007687;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1344712 1345935 1 - . ID=LTnewLM_360043400 LTnewLM_36 AUGUSTUS mRNA 1344712 1345935 1 - . ID=LTnewLM_360043400.1;Parent=LTnewLM_360043400 LTnewLM_36 AUGUSTUS CDS 1344712 1345935 1 - 0 ID=LTnewLM_360043400.1:CDS:1;Parent=LTnewLM_360043400.1 ### LTnewLM_36 . polypeptide 1344712 1345935 . - . ID=LTnewLM_360043400.1:pep;Derives_from=LTnewLM_360043400.1;orthologous_to=LmjF.36.3310_mRNA;ortholog_cluster=OG0006421;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_36 Pfam protein_match 1344724 1345917 . - . Parent=LTnewLM_360043400.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_36 AUGUSTUS gene 1347189 1347653 1 - . ID=LTnewLM_360043500 LTnewLM_36 AUGUSTUS mRNA 1347189 1347653 1 - . ID=LTnewLM_360043500.1;Parent=LTnewLM_360043500 LTnewLM_36 AUGUSTUS CDS 1347189 1347653 1 - 0 ID=LTnewLM_360043500.1:CDS:1;Parent=LTnewLM_360043500.1 ### LTnewLM_36 . polypeptide 1347189 1347653 . - . ID=LTnewLM_360043500.1:pep;Derives_from=LTnewLM_360043500.1;orthologous_to=LmjF.36.3320_mRNA;ortholog_cluster=OG0006422;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1348956 1350182 1 - . ID=LTnewLM_360043600 LTnewLM_36 AUGUSTUS mRNA 1348956 1350182 1 - . ID=LTnewLM_360043600.1;Parent=LTnewLM_360043600 LTnewLM_36 AUGUSTUS CDS 1348956 1350182 1 - 0 ID=LTnewLM_360043600.1:CDS:1;Parent=LTnewLM_360043600.1 ### LTnewLM_36 . polypeptide 1348956 1350182 . - . ID=LTnewLM_360043600.1:pep;Derives_from=LTnewLM_360043600.1;orthologous_to=LmjF.36.3330_mRNA;ortholog_cluster=OG0006423;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1351434 1359029 1 - . ID=LTnewLM_360043700 LTnewLM_36 AUGUSTUS mRNA 1351434 1359029 1 - . ID=LTnewLM_360043700.1;Parent=LTnewLM_360043700 LTnewLM_36 AUGUSTUS CDS 1351434 1359029 1 - 0 ID=LTnewLM_360043700.1:CDS:1;Parent=LTnewLM_360043700.1 ### LTnewLM_36 . polypeptide 1351434 1359029 . - . ID=LTnewLM_360043700.1:pep;Derives_from=LTnewLM_360043700.1;orthologous_to=LmjF.36.3340_mRNA;ortholog_cluster=OG0006424;product=term%3DPiezo non-specific cation channel%2C R-Ras-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12166;Ontology_term=GO:0016021,GO:0008381 LTnewLM_36 Pfam protein_match 1351611 1353050 . - . Parent=LTnewLM_360043700.1:pep;Name=PF12166;signature_desc=Piezo non-specific cation channel%2C R-Ras-binding domain;Ontology_term=GO:0008381,GO:0016021 ### LTnewLM_36 . pseudogene 1360210 1361453 . - . ID=LTnewLM_360043800:pseudogene;coverage=0.994;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3350_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1360210 1361453 . - . ID=LTnewLM_360043800.1;Parent=LTnewLM_360043800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1360210 1361453 . - . ID=LTnewLM_360043800.1:pseudogenic_exon:1;Parent=LTnewLM_360043800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1360210 1361453 . - . ID=LTnewLM_360043800.1:pep;Derives_from=LTnewLM_360043800.1;orthologous_to=LmjF.36.3350_mRNA;ortholog_cluster=OG0007688;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1361628 1361960 1 - . ID=LTnewLM_360043900 LTnewLM_36 AUGUSTUS mRNA 1361628 1361960 1 - . ID=LTnewLM_360043900.1;Parent=LTnewLM_360043900 LTnewLM_36 AUGUSTUS CDS 1361628 1361960 1 - 0 ID=LTnewLM_360043900.1:CDS:1;Parent=LTnewLM_360043900.1 ### LTnewLM_36 . polypeptide 1361628 1361960 . - . ID=LTnewLM_360043900.1:pep;Derives_from=LTnewLM_360043900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1362514 1363185 1 - . ID=LTnewLM_360044000 LTnewLM_36 AUGUSTUS mRNA 1362514 1363185 1 - . ID=LTnewLM_360044000.1;Parent=LTnewLM_360044000 LTnewLM_36 AUGUSTUS CDS 1362514 1363185 1 - 0 ID=LTnewLM_360044000.1:CDS:1;Parent=LTnewLM_360044000.1 ### LTnewLM_36 . polypeptide 1362514 1363185 . - . ID=LTnewLM_360044000.1:pep;Derives_from=LTnewLM_360044000.1;orthologous_to=LmjF.36.3360_mRNA;ortholog_cluster=OG0006425;product=term%3DBromodomain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00439;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1362787 1363008 . - . Parent=LTnewLM_360044000.1:pep;Name=PF00439;signature_desc=Bromodomain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1364267 1364575 1 - . ID=LTnewLM_360044100 LTnewLM_36 AUGUSTUS mRNA 1364267 1364575 1 - . ID=LTnewLM_360044100.1;Parent=LTnewLM_360044100 LTnewLM_36 AUGUSTUS CDS 1364267 1364575 1 - 0 ID=LTnewLM_360044100.1:CDS:1;Parent=LTnewLM_360044100.1 ### LTnewLM_36 . polypeptide 1364267 1364575 . - . ID=LTnewLM_360044100.1:pep;Derives_from=LTnewLM_360044100.1;orthologous_to=LmjF.36.3370_mRNA;ortholog_cluster=OG0006426;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1365640 1366047 1 - . ID=LTnewLM_360044200 LTnewLM_36 AUGUSTUS mRNA 1365640 1366047 1 - . ID=LTnewLM_360044200.1;Parent=LTnewLM_360044200 LTnewLM_36 AUGUSTUS CDS 1365640 1366047 1 - 0 ID=LTnewLM_360044200.1:CDS:1;Parent=LTnewLM_360044200.1 ### LTnewLM_36 . polypeptide 1365640 1366047 . - . ID=LTnewLM_360044200.1:pep;Derives_from=LTnewLM_360044200.1;orthologous_to=LmjF.36.3380_mRNA;ortholog_cluster=OG0006427;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1366698 1366910 1 - . ID=LTnewLM_360044300 LTnewLM_36 AUGUSTUS mRNA 1366698 1366910 1 - . ID=LTnewLM_360044300.1;Parent=LTnewLM_360044300 LTnewLM_36 AUGUSTUS CDS 1366698 1366910 1 - 0 ID=LTnewLM_360044300.1:CDS:1;Parent=LTnewLM_360044300.1 ### LTnewLM_36 . polypeptide 1366698 1366910 . - . ID=LTnewLM_360044300.1:pep;Derives_from=LTnewLM_360044300.1;orthologous_to=LTnewLM_360044400.1,LmjF.36.3390_mRNA,LmjF.36.3400_mRNA;ortholog_cluster=OG0000260;product=term%3DRibosomal L29e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01779;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1366830 1366904 . - . Parent=LTnewLM_360044300.1:pep;Name=PF01779;signature_desc=Ribosomal L29e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1367998 1368210 1 - . ID=LTnewLM_360044400 LTnewLM_36 AUGUSTUS mRNA 1367998 1368210 1 - . ID=LTnewLM_360044400.1;Parent=LTnewLM_360044400 LTnewLM_36 AUGUSTUS CDS 1367998 1368210 1 - 0 ID=LTnewLM_360044400.1:CDS:1;Parent=LTnewLM_360044400.1 ### LTnewLM_36 . polypeptide 1367998 1368210 . - . ID=LTnewLM_360044400.1:pep;Derives_from=LTnewLM_360044400.1;orthologous_to=LTnewLM_360044300.1,LmjF.36.3390_mRNA,LmjF.36.3400_mRNA;ortholog_cluster=OG0000260;product=term%3DRibosomal L29e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01779;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1368130 1368204 . - . Parent=LTnewLM_360044400.1:pep;Name=PF01779;signature_desc=Ribosomal L29e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1369018 1369938 1 - . ID=LTnewLM_360044500 LTnewLM_36 AUGUSTUS mRNA 1369018 1369938 1 - . ID=LTnewLM_360044500.1;Parent=LTnewLM_360044500 LTnewLM_36 AUGUSTUS CDS 1369018 1369938 1 - 0 ID=LTnewLM_360044500.1:CDS:1;Parent=LTnewLM_360044500.1 ### LTnewLM_36 . polypeptide 1369018 1369938 . - . ID=LTnewLM_360044500.1:pep;Derives_from=LTnewLM_360044500.1;orthologous_to=LmjF.36.3410_mRNA;ortholog_cluster=OG0006428;product=term%3DKR domain/short chain dehydrogenase/Enoyl-(Acyl carrier protein) reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08659|Pfam:PF00106|Pfam:PF13561;Ontology_term=GO:0008152,GO:0016491 LTnewLM_36 Pfam protein_match 1369231 1369812 . - . Parent=LTnewLM_360044500.1:pep;Name=PF13561;signature_desc=Enoyl-(Acyl carrier protein) reductase LTnewLM_36 Pfam protein_match 1369240 1369836 . - . Parent=LTnewLM_360044500.1:pep;Name=PF00106;signature_desc=short chain dehydrogenase;Ontology_term=GO:0016491,GO:0008152 LTnewLM_36 Pfam protein_match 1369300 1369836 . - . Parent=LTnewLM_360044500.1:pep;Name=PF08659;signature_desc=KR domain ### LTnewLM_36 AUGUSTUS gene 1370699 1371784 1 - . ID=LTnewLM_360044600 LTnewLM_36 AUGUSTUS mRNA 1370699 1371784 1 - . ID=LTnewLM_360044600.1;Parent=LTnewLM_360044600 LTnewLM_36 AUGUSTUS CDS 1370699 1371784 1 - 0 ID=LTnewLM_360044600.1:CDS:1;Parent=LTnewLM_360044600.1 ### LTnewLM_36 . polypeptide 1370699 1371784 . - . ID=LTnewLM_360044600.1:pep;Derives_from=LTnewLM_360044600.1;orthologous_to=LmjF.36.3420_mRNA;ortholog_cluster=OG0006429;product=term%3DVacuolar protein sorting-associated protein 26%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03643 LTnewLM_36 Pfam protein_match 1370843 1371703 . - . Parent=LTnewLM_360044600.1:pep;Name=PF03643;signature_desc=Vacuolar protein sorting-associated protein 26 ### LTnewLM_36 AUGUSTUS gene 1373114 1375492 1 - . ID=LTnewLM_360044700 LTnewLM_36 AUGUSTUS mRNA 1373114 1375492 1 - . ID=LTnewLM_360044700.1;Parent=LTnewLM_360044700 LTnewLM_36 AUGUSTUS CDS 1373114 1375492 1 - 0 ID=LTnewLM_360044700.1:CDS:1;Parent=LTnewLM_360044700.1 ### LTnewLM_36 . polypeptide 1373114 1375492 . - . ID=LTnewLM_360044700.1:pep;Derives_from=LTnewLM_360044700.1;orthologous_to=LmjF.36.3430_mRNA;ortholog_cluster=OG0006430;product=term%3DCRAL/TRIO domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00650 LTnewLM_36 Pfam protein_match 1374668 1375126 . - . Parent=LTnewLM_360044700.1:pep;Name=PF00650;signature_desc=CRAL/TRIO domain ### LTnewLM_36 AUGUSTUS gene 1378357 1379007 1 - . ID=LTnewLM_360044800 LTnewLM_36 AUGUSTUS mRNA 1378357 1379007 1 - . ID=LTnewLM_360044800.1;Parent=LTnewLM_360044800 LTnewLM_36 AUGUSTUS CDS 1378357 1379007 1 - 0 ID=LTnewLM_360044800.1:CDS:1;Parent=LTnewLM_360044800.1 ### LTnewLM_36 . polypeptide 1378357 1379007 . - . ID=LTnewLM_360044800.1:pep;Derives_from=LTnewLM_360044800.1;orthologous_to=LmjF.36.3440_mRNA;ortholog_cluster=OG0006431;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_36 Pfam protein_match 1378450 1378950 . - . Parent=LTnewLM_360044800.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_36 AUGUSTUS gene 1380090 1380947 1 - . ID=LTnewLM_360044900 LTnewLM_36 AUGUSTUS mRNA 1380090 1380947 1 - . ID=LTnewLM_360044900.1;Parent=LTnewLM_360044900 LTnewLM_36 AUGUSTUS CDS 1380090 1380947 1 - 0 ID=LTnewLM_360044900.1:CDS:1;Parent=LTnewLM_360044900.1 ### LTnewLM_36 . polypeptide 1380090 1380947 . - . ID=LTnewLM_360044900.1:pep;Derives_from=LTnewLM_360044900.1;orthologous_to=LmjF.36.3450_mRNA;ortholog_cluster=OG0006432;product=term%3DGlycosyltransferase family 25 (LPS biosynthesis protein)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01755;Ontology_term=GO:0009103 LTnewLM_36 Pfam protein_match 1380237 1380890 . - . Parent=LTnewLM_360044900.1:pep;Name=PF01755;signature_desc=Glycosyltransferase family 25 (LPS biosynthesis protein);Ontology_term=GO:0009103 ### LTnewLM_36 AUGUSTUS gene 1381947 1382549 1 - . ID=LTnewLM_360045000 LTnewLM_36 AUGUSTUS mRNA 1381947 1382549 1 - . ID=LTnewLM_360045000.1;Parent=LTnewLM_360045000 LTnewLM_36 AUGUSTUS CDS 1381947 1382549 1 - 0 ID=LTnewLM_360045000.1:CDS:1;Parent=LTnewLM_360045000.1 ### LTnewLM_36 . polypeptide 1381947 1382549 . - . ID=LTnewLM_360045000.1:pep;Derives_from=LTnewLM_360045000.1;orthologous_to=LmjF.36.3460_mRNA;ortholog_cluster=OG0006433;product=term%3DNIPSNAP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07978 LTnewLM_36 Pfam protein_match 1382217 1382495 . - . Parent=LTnewLM_360045000.1:pep;Name=PF07978;signature_desc=NIPSNAP ### LTnewLM_36 AUGUSTUS gene 1384850 1387888 1 - . ID=LTnewLM_360045100 LTnewLM_36 AUGUSTUS mRNA 1384850 1387888 1 - . ID=LTnewLM_360045100.1;Parent=LTnewLM_360045100 LTnewLM_36 AUGUSTUS CDS 1384850 1387888 1 - 0 ID=LTnewLM_360045100.1:CDS:1;Parent=LTnewLM_360045100.1 ### LTnewLM_36 . polypeptide 1384850 1387888 . - . ID=LTnewLM_360045100.1:pep;Derives_from=LTnewLM_360045100.1;orthologous_to=LmjF.36.3470_mRNA;ortholog_cluster=OG0006434;product=term%3D2-oxoglutarate dehydrogenase N-terminus/Dehydrogenase E1 component/Transketolase%2C pyrimidine binding domain/2-oxoglutarate dehydrogenase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16078|Pfam:PF00676|Pfam:PF02779|Pfam:PF16870;Ontology_term=GO:0016624,GO:0008152 LTnewLM_36 Pfam protein_match 1384859 1385275 . - . Parent=LTnewLM_360045100.1:pep;Name=PF16870;signature_desc=2-oxoglutarate dehydrogenase C-terminal LTnewLM_36 Pfam protein_match 1385291 1385914 . - . Parent=LTnewLM_360045100.1:pep;Name=PF02779;signature_desc=Transketolase%2C pyrimidine binding domain LTnewLM_36 Pfam protein_match 1386170 1387078 . - . Parent=LTnewLM_360045100.1:pep;Name=PF00676;signature_desc=Dehydrogenase E1 component;Ontology_term=GO:0016624,GO:0008152 LTnewLM_36 Pfam protein_match 1387628 1387732 . - . Parent=LTnewLM_360045100.1:pep;Name=PF16078;signature_desc=2-oxoglutarate dehydrogenase N-terminus ### LTnewLM_36 AUGUSTUS gene 1389409 1390038 1 - . ID=LTnewLM_360045200 LTnewLM_36 AUGUSTUS mRNA 1389409 1390038 1 - . ID=LTnewLM_360045200.1;Parent=LTnewLM_360045200 LTnewLM_36 AUGUSTUS CDS 1389409 1390038 1 - 0 ID=LTnewLM_360045200.1:CDS:1;Parent=LTnewLM_360045200.1 ### LTnewLM_36 . polypeptide 1389409 1390038 . - . ID=LTnewLM_360045200.1:pep;Derives_from=LTnewLM_360045200.1;orthologous_to=LmjF.36.3480_mRNA;ortholog_cluster=OG0006435;product=term%3DSmall acidic protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15477 LTnewLM_36 Pfam protein_match 1389418 1389627 . - . Parent=LTnewLM_360045200.1:pep;Name=PF15477;signature_desc=Small acidic protein family ### LTnewLM_36 AUGUSTUS gene 1390946 1391965 1 - . ID=LTnewLM_360045300 LTnewLM_36 AUGUSTUS mRNA 1390946 1391965 1 - . ID=LTnewLM_360045300.1;Parent=LTnewLM_360045300 LTnewLM_36 AUGUSTUS CDS 1390946 1391965 1 - 0 ID=LTnewLM_360045300.1:CDS:1;Parent=LTnewLM_360045300.1 ### LTnewLM_36 . polypeptide 1390946 1391965 . - . ID=LTnewLM_360045300.1:pep;Derives_from=LTnewLM_360045300.1;orthologous_to=LmjF.36.3490_mRNA;ortholog_cluster=OG0006436;product=term%3DCilia- and flagella-associated protein 298%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11069 LTnewLM_36 Pfam protein_match 1391090 1391356 . - . Parent=LTnewLM_360045300.1:pep;Name=PF11069;signature_desc=Cilia- and flagella-associated protein 298 ### LTnewLM_36 AUGUSTUS gene 1392736 1395198 1 - . ID=LTnewLM_360045400 LTnewLM_36 AUGUSTUS mRNA 1392736 1395198 1 - . ID=LTnewLM_360045400.1;Parent=LTnewLM_360045400 LTnewLM_36 AUGUSTUS CDS 1392736 1395198 1 - 0 ID=LTnewLM_360045400.1:CDS:1;Parent=LTnewLM_360045400.1 ### LTnewLM_36 . polypeptide 1392736 1395198 . - . ID=LTnewLM_360045400.1:pep;Derives_from=LTnewLM_360045400.1;orthologous_to=LmjF.36.3500_mRNA;ortholog_cluster=OG0006437;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1396167 1396736 1 - . ID=LTnewLM_360045500 LTnewLM_36 AUGUSTUS mRNA 1396167 1396736 1 - . ID=LTnewLM_360045500.1;Parent=LTnewLM_360045500 LTnewLM_36 AUGUSTUS CDS 1396167 1396736 1 - 0 ID=LTnewLM_360045500.1:CDS:1;Parent=LTnewLM_360045500.1 ### LTnewLM_36 . polypeptide 1396167 1396736 . - . ID=LTnewLM_360045500.1:pep;Derives_from=LTnewLM_360045500.1;orthologous_to=LmjF.36.3510_mRNA;ortholog_cluster=OG0006438;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1397619 1398398 1 - . ID=LTnewLM_360045600 LTnewLM_36 AUGUSTUS mRNA 1397619 1398398 1 - . ID=LTnewLM_360045600.1;Parent=LTnewLM_360045600 LTnewLM_36 AUGUSTUS CDS 1397619 1398398 1 - 0 ID=LTnewLM_360045600.1:CDS:1;Parent=LTnewLM_360045600.1 ### LTnewLM_36 . polypeptide 1397619 1398398 . - . ID=LTnewLM_360045600.1:pep;Derives_from=LTnewLM_360045600.1;orthologous_to=LmjF.36.3520_mRNA;ortholog_cluster=OG0006439;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1401008 1407622 1 - . ID=LTnewLM_360045700 LTnewLM_36 AUGUSTUS mRNA 1401008 1407622 1 - . ID=LTnewLM_360045700.1;Parent=LTnewLM_360045700 LTnewLM_36 AUGUSTUS CDS 1401008 1407622 1 - 0 ID=LTnewLM_360045700.1:CDS:1;Parent=LTnewLM_360045700.1 ### LTnewLM_36 . polypeptide 1401008 1407622 . - . ID=LTnewLM_360045700.1:pep;Derives_from=LTnewLM_360045700.1;orthologous_to=LmjF.36.3530_mRNA;ortholog_cluster=OG0006440;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF14560;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401020 1401232 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401029 1401238 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1401038 1401199 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401248 1401460 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401257 1401466 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1401266 1401427 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401476 1401688 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401485 1401694 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1401494 1401655 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401704 1401916 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401713 1401922 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1401722 1401883 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401932 1402144 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1401941 1402150 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1401950 1402111 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402160 1402372 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402169 1402378 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1402178 1402339 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402388 1402600 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402397 1402606 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1402406 1402567 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402616 1402828 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402625 1402834 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1402634 1402795 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402844 1403056 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1402853 1403062 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1402862 1403023 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403072 1403284 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403081 1403290 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1403090 1403251 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403300 1403512 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403309 1403518 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1403318 1403479 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403528 1403740 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403537 1403746 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1403546 1403707 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403756 1403968 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403765 1403974 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1403774 1403935 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403984 1404196 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1403993 1404202 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1404002 1404163 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404212 1404424 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404221 1404430 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1404230 1404391 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404440 1404652 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404449 1404658 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1404458 1404619 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404668 1404880 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404677 1404886 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1404686 1404847 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404896 1405108 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1404905 1405114 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1404914 1405075 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405124 1405336 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405133 1405342 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1405142 1405303 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405352 1405564 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405361 1405570 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1405370 1405531 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405580 1405792 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405589 1405798 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1405598 1405759 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405808 1406020 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1405817 1406026 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1405826 1405987 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406036 1406248 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406045 1406254 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1406054 1406215 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406264 1406476 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406273 1406482 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1406282 1406443 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406492 1406704 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406501 1406710 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1406510 1406671 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406720 1406932 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406729 1406938 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1406738 1406899 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406948 1407160 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1406957 1407166 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1406966 1407127 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1407176 1407388 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1407185 1407394 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1407194 1407355 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1407404 1407616 . - . Parent=LTnewLM_360045700.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1407413 1407622 . - . Parent=LTnewLM_360045700.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_36 Pfam protein_match 1407422 1407580 . - . Parent=LTnewLM_360045700.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1408957 1410072 1 - . ID=LTnewLM_360045800 LTnewLM_36 AUGUSTUS mRNA 1408957 1410072 1 - . ID=LTnewLM_360045800.1;Parent=LTnewLM_360045800 LTnewLM_36 AUGUSTUS CDS 1408957 1410072 1 - 0 ID=LTnewLM_360045800.1:CDS:1;Parent=LTnewLM_360045800.1 ### LTnewLM_36 . polypeptide 1408957 1410072 . - . ID=LTnewLM_360045800.1:pep;Derives_from=LTnewLM_360045800.1;orthologous_to=LmjF.36.3540_mRNA;ortholog_cluster=OG0006441;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1411217 1414795 0.95 - . ID=LTnewLM_360045900 LTnewLM_36 AUGUSTUS mRNA 1411217 1414795 0.95 - . ID=LTnewLM_360045900.1;Parent=LTnewLM_360045900 LTnewLM_36 AUGUSTUS CDS 1411217 1411235 0.95 - 1 ID=LTnewLM_360045900.1:CDS:1;Parent=LTnewLM_360045900.1 LTnewLM_36 AUGUSTUS CDS 1411305 1414795 0.99 - 0 ID=LTnewLM_360045900.1:CDS:2;Parent=LTnewLM_360045900.1 ### LTnewLM_36 . polypeptide 1411217 1414795 . - . ID=LTnewLM_360045900.1:pep;Derives_from=LTnewLM_360045900.1;orthologous_to=LmjF.36.3550_mRNA;ortholog_cluster=OG0006442;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1415773 1417662 1 - . ID=LTnewLM_360046000 LTnewLM_36 AUGUSTUS mRNA 1415773 1417662 1 - . ID=LTnewLM_360046000.1;Parent=LTnewLM_360046000 LTnewLM_36 AUGUSTUS CDS 1415773 1417662 1 - 0 ID=LTnewLM_360046000.1:CDS:1;Parent=LTnewLM_360046000.1 ### LTnewLM_36 . polypeptide 1415773 1417662 . - . ID=LTnewLM_360046000.1:pep;Derives_from=LTnewLM_360046000.1;orthologous_to=LmjF.36.3560_mRNA;ortholog_cluster=OG0006443;product=term%3DSqualene/phytoene synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00494;Ontology_term=GO:0009058,GO:0016740 LTnewLM_36 Pfam protein_match 1415995 1416633 . - . Parent=LTnewLM_360046000.1:pep;Name=PF00494;signature_desc=Squalene/phytoene synthase;Ontology_term=GO:0016740,GO:0009058 ### LTnewLM_36 AUGUSTUS gene 1418588 1419250 1 - . ID=LTnewLM_360046100 LTnewLM_36 AUGUSTUS mRNA 1418588 1419250 1 - . ID=LTnewLM_360046100.1;Parent=LTnewLM_360046100 LTnewLM_36 AUGUSTUS CDS 1418588 1419250 1 - 0 ID=LTnewLM_360046100.1:CDS:1;Parent=LTnewLM_360046100.1 ### LTnewLM_36 . polypeptide 1418588 1419250 . - . ID=LTnewLM_360046100.1:pep;Derives_from=LTnewLM_360046100.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1421293 1423110 1 - . ID=LTnewLM_360046200 LTnewLM_36 AUGUSTUS mRNA 1421293 1423110 1 - . ID=LTnewLM_360046200.1;Parent=LTnewLM_360046200 LTnewLM_36 AUGUSTUS CDS 1421293 1423110 1 - 0 ID=LTnewLM_360046200.1:CDS:1;Parent=LTnewLM_360046200.1 ### LTnewLM_36 . polypeptide 1421293 1423110 . - . ID=LTnewLM_360046200.1:pep;Derives_from=LTnewLM_360046200.1;orthologous_to=LmjF.36.3570_mRNA;ortholog_cluster=OG0006444;product=term%3DSignal recognition particle%2C alpha subunit%2C N-terminal/SRP54-type protein%2C helical bundle domain/SRP54-type protein%2C GTPase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04086|Pfam:PF02881|Pfam:PF00448;Ontology_term=GO:0005525,GO:0006614,GO:0003924,GO:0005785,GO:0005047,GO:0006886,GO:0006184 LTnewLM_36 Pfam protein_match 1421302 1421913 . - . Parent=LTnewLM_360046200.1:pep;Name=PF00448;signature_desc=SRP54-type protein%2C GTPase domain;Ontology_term=GO:0005525,GO:0006614 LTnewLM_36 Pfam protein_match 1422007 1422216 . - . Parent=LTnewLM_360046200.1:pep;Name=PF02881;signature_desc=SRP54-type protein%2C helical bundle domain;Ontology_term=GO:0005525,GO:0006614 LTnewLM_36 Pfam protein_match 1422376 1423029 . - . Parent=LTnewLM_360046200.1:pep;Name=PF04086;signature_desc=Signal recognition particle%2C alpha subunit%2C N-terminal;Ontology_term=GO:0003924,GO:0005047,GO:0005525,GO:0006184,GO:0006886,GO:0005785 ### LTnewLM_36 AUGUSTUS gene 1424099 1425502 1 - . ID=LTnewLM_360046300 LTnewLM_36 AUGUSTUS mRNA 1424099 1425502 1 - . ID=LTnewLM_360046300.1;Parent=LTnewLM_360046300 LTnewLM_36 AUGUSTUS CDS 1424099 1425502 1 - 0 ID=LTnewLM_360046300.1:CDS:1;Parent=LTnewLM_360046300.1 ### LTnewLM_36 . polypeptide 1424099 1425502 . - . ID=LTnewLM_360046300.1:pep;Derives_from=LTnewLM_360046300.1;orthologous_to=LmjF.36.3580_mRNA;ortholog_cluster=OG0006445;product=term%3DProtein of unknown function (DUF2009)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09418 LTnewLM_36 Pfam protein_match 1424105 1425490 . - . Parent=LTnewLM_360046300.1:pep;Name=PF09418;signature_desc=Protein of unknown function (DUF2009) ### LTnewLM_36 AUGUSTUS gene 1427880 1428881 1 - . ID=LTnewLM_360046400 LTnewLM_36 AUGUSTUS mRNA 1427880 1428881 1 - . ID=LTnewLM_360046400.1;Parent=LTnewLM_360046400 LTnewLM_36 AUGUSTUS CDS 1427880 1428881 1 - 0 ID=LTnewLM_360046400.1:CDS:1;Parent=LTnewLM_360046400.1 ### LTnewLM_36 . polypeptide 1427880 1428881 . - . ID=LTnewLM_360046400.1:pep;Derives_from=LTnewLM_360046400.1;orthologous_to=LmjF.36.3590_mRNA;ortholog_cluster=OG0006446;product=term%3DPyridoxal-phosphate dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00291 LTnewLM_36 Pfam protein_match 1427982 1428836 . - . Parent=LTnewLM_360046400.1:pep;Name=PF00291;signature_desc=Pyridoxal-phosphate dependent enzyme ### LTnewLM_36 AUGUSTUS gene 1429558 1430982 1 - . ID=LTnewLM_360046500 LTnewLM_36 AUGUSTUS mRNA 1429558 1430982 1 - . ID=LTnewLM_360046500.1;Parent=LTnewLM_360046500 LTnewLM_36 AUGUSTUS CDS 1429558 1430982 1 - 0 ID=LTnewLM_360046500.1:CDS:1;Parent=LTnewLM_360046500.1 ### LTnewLM_36 . polypeptide 1429558 1430982 . - . ID=LTnewLM_360046500.1:pep;Derives_from=LTnewLM_360046500.1;orthologous_to=LmjF.36.3600_mRNA;ortholog_cluster=OG0006447;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1433317 1434930 1 - . ID=LTnewLM_360046600 LTnewLM_36 AUGUSTUS mRNA 1433317 1434930 1 - . ID=LTnewLM_360046600.1;Parent=LTnewLM_360046600 LTnewLM_36 AUGUSTUS CDS 1433317 1434930 1 - 0 ID=LTnewLM_360046600.1:CDS:1;Parent=LTnewLM_360046600.1 ### LTnewLM_36 . polypeptide 1433317 1434930 . - . ID=LTnewLM_360046600.1:pep;Derives_from=LTnewLM_360046600.1;orthologous_to=LmjF.36.3610_mRNA;ortholog_cluster=OG0006448;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1436832 1437143 1 - . ID=LTnewLM_360046700 LTnewLM_36 AUGUSTUS mRNA 1436832 1437143 1 - . ID=LTnewLM_360046700.1;Parent=LTnewLM_360046700 LTnewLM_36 AUGUSTUS CDS 1436832 1437143 1 - 0 ID=LTnewLM_360046700.1:CDS:1;Parent=LTnewLM_360046700.1 ### LTnewLM_36 . polypeptide 1436832 1437143 . - . ID=LTnewLM_360046700.1:pep;Derives_from=LTnewLM_360046700.1;orthologous_to=LmjF.36.3620_mRNA;ortholog_cluster=OG0006449;product=term%3DEF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499 LTnewLM_36 Pfam protein_match 1436856 1437050 . - . Parent=LTnewLM_360046700.1:pep;Name=PF13499;signature_desc=EF-hand domain pair ### LTnewLM_36 AUGUSTUS gene 1439650 1440531 1 - . ID=LTnewLM_360046800 LTnewLM_36 AUGUSTUS mRNA 1439650 1440531 1 - . ID=LTnewLM_360046800.1;Parent=LTnewLM_360046800 LTnewLM_36 AUGUSTUS CDS 1439650 1440531 1 - 0 ID=LTnewLM_360046800.1:CDS:1;Parent=LTnewLM_360046800.1 ### LTnewLM_36 . polypeptide 1439650 1440531 . - . ID=LTnewLM_360046800.1:pep;Derives_from=LTnewLM_360046800.1;orthologous_to=LmjF.36.3630_mRNA;ortholog_cluster=OG0006450;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1441021 1441386 1 - . ID=LTnewLM_360046900 LTnewLM_36 AUGUSTUS mRNA 1441021 1441386 1 - . ID=LTnewLM_360046900.1;Parent=LTnewLM_360046900 LTnewLM_36 AUGUSTUS CDS 1441021 1441386 1 - 0 ID=LTnewLM_360046900.1:CDS:1;Parent=LTnewLM_360046900.1 ### LTnewLM_36 . polypeptide 1441021 1441386 . - . ID=LTnewLM_360046900.1:pep;Derives_from=LTnewLM_360046900.1;orthologous_to=LmjF.36.3640_mRNA;ortholog_cluster=OG0006451;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1441894 1443075 1 - . ID=LTnewLM_360047000 LTnewLM_36 AUGUSTUS mRNA 1441894 1443075 1 - . ID=LTnewLM_360047000.1;Parent=LTnewLM_360047000 LTnewLM_36 AUGUSTUS CDS 1441894 1443075 1 - 0 ID=LTnewLM_360047000.1:CDS:1;Parent=LTnewLM_360047000.1 ### LTnewLM_36 . polypeptide 1441894 1443075 . - . ID=LTnewLM_360047000.1:pep;Derives_from=LTnewLM_360047000.1;orthologous_to=LmjF.36.3650_mRNA;ortholog_cluster=OG0006452;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1442476 1442595 . - . Parent=LTnewLM_360047000.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1443549 1444145 1 - . ID=LTnewLM_360047100 LTnewLM_36 AUGUSTUS mRNA 1443549 1444145 1 - . ID=LTnewLM_360047100.1;Parent=LTnewLM_360047100 LTnewLM_36 AUGUSTUS CDS 1443549 1444145 1 - 0 ID=LTnewLM_360047100.1:CDS:1;Parent=LTnewLM_360047100.1 ### LTnewLM_36 . polypeptide 1443549 1444145 . - . ID=LTnewLM_360047100.1:pep;Derives_from=LTnewLM_360047100.1;orthologous_to=LmjF.36.3653_mRNA;ortholog_cluster=OG0006453;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1445043 1446800 1 - . ID=LTnewLM_360047200 LTnewLM_36 AUGUSTUS mRNA 1445043 1446800 1 - . ID=LTnewLM_360047200.1;Parent=LTnewLM_360047200 LTnewLM_36 AUGUSTUS CDS 1445043 1446800 1 - 0 ID=LTnewLM_360047200.1:CDS:1;Parent=LTnewLM_360047200.1 ### LTnewLM_36 . polypeptide 1445043 1446800 . - . ID=LTnewLM_360047200.1:pep;Derives_from=LTnewLM_360047200.1;orthologous_to=LmjF.36.3657_mRNA;ortholog_cluster=OG0006454;product=term%3DTectonic domain DUF1619%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07773 LTnewLM_36 Pfam protein_match 1445733 1446659 . - . Parent=LTnewLM_360047200.1:pep;Name=PF07773;signature_desc=Tectonic domain DUF1619 ### LTnewLM_36 AUGUSTUS gene 1447111 1447779 1 - . ID=LTnewLM_360047300 LTnewLM_36 AUGUSTUS mRNA 1447111 1447779 1 - . ID=LTnewLM_360047300.1;Parent=LTnewLM_360047300 LTnewLM_36 AUGUSTUS CDS 1447111 1447779 1 - 0 ID=LTnewLM_360047300.1:CDS:1;Parent=LTnewLM_360047300.1 ### LTnewLM_36 . polypeptide 1447111 1447779 . - . ID=LTnewLM_360047300.1:pep;Derives_from=LTnewLM_360047300.1;orthologous_to=LmjF.36.3660_mRNA;ortholog_cluster=OG0006455;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 1447243 1447578 . - . Parent=LTnewLM_360047300.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 1448606 1449628 0.59 + . ID=LTnewLM_360047400 LTnewLM_36 AUGUSTUS mRNA 1448606 1449628 0.59 + . ID=LTnewLM_360047400.1;Parent=LTnewLM_360047400 LTnewLM_36 AUGUSTUS CDS 1448606 1449628 0.59 + 0 ID=LTnewLM_360047400.1:CDS:1;Parent=LTnewLM_360047400.1 ### LTnewLM_36 . polypeptide 1448606 1449628 . + . ID=LTnewLM_360047400.1:pep;Derives_from=LTnewLM_360047400.1;orthologous_to=LmjF.36.3670_mRNA;ortholog_cluster=OG0006456;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1449995 1450462 1 + . ID=LTnewLM_360047500 LTnewLM_36 AUGUSTUS mRNA 1449995 1450462 1 + . ID=LTnewLM_360047500.1;Parent=LTnewLM_360047500 LTnewLM_36 AUGUSTUS CDS 1449995 1450462 1 + 0 ID=LTnewLM_360047500.1:CDS:1;Parent=LTnewLM_360047500.1 ### LTnewLM_36 . polypeptide 1449995 1450462 . + . ID=LTnewLM_360047500.1:pep;Derives_from=LTnewLM_360047500.1;orthologous_to=LmjF.36.3675_mRNA;ortholog_cluster=OG0006457;product=term%3DEF-hand domain pair/EF hand/EF-hand domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499|Pfam:PF00036|Pfam:PF13405|Pfam:PF13202|Pfam:PF13833;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450025 1450210 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_36 Pfam protein_match 1450028 1450108 . + . Parent=LTnewLM_360047500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450028 1450114 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450031 1450099 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450067 1450210 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_36 Pfam protein_match 1450160 1450210 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450250 1450432 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_36 Pfam protein_match 1450289 1450435 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_36 Pfam protein_match 1450367 1450438 . + . Parent=LTnewLM_360047500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_36 Pfam protein_match 1450370 1450432 . + . Parent=LTnewLM_360047500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_36 AUGUSTUS gene 1451040 1453973 1 + . ID=LTnewLM_360047600 LTnewLM_36 AUGUSTUS mRNA 1451040 1453973 1 + . ID=LTnewLM_360047600.1;Parent=LTnewLM_360047600 LTnewLM_36 AUGUSTUS CDS 1451040 1453973 1 + 0 ID=LTnewLM_360047600.1:CDS:1;Parent=LTnewLM_360047600.1 ### LTnewLM_36 . polypeptide 1451040 1453973 . + . ID=LTnewLM_360047600.1:pep;Derives_from=LTnewLM_360047600.1;orthologous_to=LmjF.36.3680_mRNA;ortholog_cluster=OG0006458;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 1453125 1453835 . + . Parent=LTnewLM_360047600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1453128 1453808 . + . Parent=LTnewLM_360047600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1454694 1457921 1 + . ID=LTnewLM_360047700 LTnewLM_36 AUGUSTUS mRNA 1454694 1457921 1 + . ID=LTnewLM_360047700.1;Parent=LTnewLM_360047700 LTnewLM_36 AUGUSTUS CDS 1454694 1457921 1 + 0 ID=LTnewLM_360047700.1:CDS:1;Parent=LTnewLM_360047700.1 ### LTnewLM_36 . polypeptide 1454694 1457921 . + . ID=LTnewLM_360047700.1:pep;Derives_from=LTnewLM_360047700.1;orthologous_to=LmjF.36.3690_mRNA;ortholog_cluster=OG0006459;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1459302 1459886 1 + . ID=LTnewLM_360047800 LTnewLM_36 AUGUSTUS mRNA 1459302 1459886 1 + . ID=LTnewLM_360047800.1;Parent=LTnewLM_360047800 LTnewLM_36 AUGUSTUS CDS 1459302 1459886 1 + 0 ID=LTnewLM_360047800.1:CDS:1;Parent=LTnewLM_360047800.1 ### LTnewLM_36 . polypeptide 1459302 1459886 . + . ID=LTnewLM_360047800.1:pep;Derives_from=LTnewLM_360047800.1;orthologous_to=LmjF.36.3700_mRNA;ortholog_cluster=OG0006460;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1467682 1469040 1 + . ID=LTnewLM_360047900 LTnewLM_36 AUGUSTUS mRNA 1467682 1469040 1 + . ID=LTnewLM_360047900.1;Parent=LTnewLM_360047900 LTnewLM_36 AUGUSTUS CDS 1467682 1469040 1 + 0 ID=LTnewLM_360047900.1:CDS:1;Parent=LTnewLM_360047900.1 ### LTnewLM_36 . polypeptide 1467682 1469040 . + . ID=LTnewLM_360047900.1:pep;Derives_from=LTnewLM_360047900.1;orthologous_to=LmjF.36.3710_mRNA;ortholog_cluster=OG0006461;product=term%3DmRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16575 LTnewLM_36 Pfam protein_match 1468009 1468545 . + . Parent=LTnewLM_360047900.1:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop ### LTnewLM_36 AUGUSTUS gene 1470060 1471943 1 + . ID=LTnewLM_360048000 LTnewLM_36 AUGUSTUS mRNA 1470060 1471943 1 + . ID=LTnewLM_360048000.1;Parent=LTnewLM_360048000 LTnewLM_36 AUGUSTUS CDS 1470060 1471943 1 + 0 ID=LTnewLM_360048000.1:CDS:1;Parent=LTnewLM_360048000.1 ### LTnewLM_36 . polypeptide 1470060 1471943 . + . ID=LTnewLM_360048000.1:pep;Derives_from=LTnewLM_360048000.1;orthologous_to=LmjF.36.3720_mRNA;ortholog_cluster=OG0006462;product=term%3DProtein of unknown function (DUF498/DUF598)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04430 LTnewLM_36 Pfam protein_match 1470837 1471160 . + . Parent=LTnewLM_360048000.1:pep;Name=PF04430;signature_desc=Protein of unknown function (DUF498/DUF598) ### LTnewLM_36 AUGUSTUS gene 1473037 1473582 1 + . ID=LTnewLM_360048100 LTnewLM_36 AUGUSTUS mRNA 1473037 1473582 1 + . ID=LTnewLM_360048100.1;Parent=LTnewLM_360048100 LTnewLM_36 AUGUSTUS CDS 1473037 1473582 1 + 0 ID=LTnewLM_360048100.1:CDS:1;Parent=LTnewLM_360048100.1 ### LTnewLM_36 . polypeptide 1473037 1473582 . + . ID=LTnewLM_360048100.1:pep;Derives_from=LTnewLM_360048100.1;orthologous_to=LmjF.36.3730_mRNA;ortholog_cluster=OG0006463;product=term%3DtRNA intron endonuclease%2C catalytic C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01974;Ontology_term=GO:0006388,GO:0000213 LTnewLM_36 Pfam protein_match 1473265 1473486 . + . Parent=LTnewLM_360048100.1:pep;Name=PF01974;signature_desc=tRNA intron endonuclease%2C catalytic C-terminal domain;Ontology_term=GO:0000213,GO:0006388 ### LTnewLM_36 AUGUSTUS gene 1474419 1474925 1 + . ID=LTnewLM_360048200 LTnewLM_36 AUGUSTUS mRNA 1474419 1474925 1 + . ID=LTnewLM_360048200.1;Parent=LTnewLM_360048200 LTnewLM_36 AUGUSTUS CDS 1474419 1474925 1 + 0 ID=LTnewLM_360048200.1:CDS:1;Parent=LTnewLM_360048200.1 ### LTnewLM_36 . polypeptide 1474419 1474925 . + . ID=LTnewLM_360048200.1:pep;Derives_from=LTnewLM_360048200.1;orthologous_to=LTnewLM_180019400.1,LmjF.18.1400_mRNA,LmjF.36.3740_mRNA;ortholog_cluster=OG0000136;product=term%3DRibosomal protein L34e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01199;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1474428 1474706 . + . Parent=LTnewLM_360048200.1:pep;Name=PF01199;signature_desc=Ribosomal protein L34e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1475645 1475905 1 + . ID=LTnewLM_360048300 LTnewLM_36 AUGUSTUS mRNA 1475645 1475905 1 + . ID=LTnewLM_360048300.1;Parent=LTnewLM_360048300 LTnewLM_36 AUGUSTUS CDS 1475645 1475905 1 + 0 ID=LTnewLM_360048300.1:CDS:1;Parent=LTnewLM_360048300.1 ### LTnewLM_36 . polypeptide 1475645 1475905 . + . ID=LTnewLM_360048300.1:pep;Derives_from=LTnewLM_360048300.1;orthologous_to=LTnewLM_180011300.1,LmjF.36.3750_mRNA;ortholog_cluster=OG0000359;product=term%3DRibosomal protein S27%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01667;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1475729 1475890 . + . Parent=LTnewLM_360048300.1:pep;Name=PF01667;signature_desc=Ribosomal protein S27;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1476610 1477254 1 + . ID=LTnewLM_360048400 LTnewLM_36 AUGUSTUS mRNA 1476610 1477254 1 + . ID=LTnewLM_360048400.1;Parent=LTnewLM_360048400 LTnewLM_36 AUGUSTUS CDS 1476610 1477254 1 + 0 ID=LTnewLM_360048400.1:CDS:1;Parent=LTnewLM_360048400.1 ### LTnewLM_36 . polypeptide 1476610 1477254 . + . ID=LTnewLM_360048400.1:pep;Derives_from=LTnewLM_360048400.1;orthologous_to=LTnewLM_180011600.1,LmjF.18.0620_mRNA,LmjF.36.3760_mRNA;ortholog_cluster=OG0000133;product=term%3DRibosomal protein L1p/L10e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00687 LTnewLM_36 Pfam protein_match 1476670 1477230 . + . Parent=LTnewLM_360048400.1:pep;Name=PF00687;signature_desc=Ribosomal protein L1p/L10e family ### LTnewLM_36 AUGUSTUS gene 1478212 1478523 1 + . ID=LTnewLM_360048500 LTnewLM_36 AUGUSTUS mRNA 1478212 1478523 1 + . ID=LTnewLM_360048500.1;Parent=LTnewLM_360048500 LTnewLM_36 AUGUSTUS CDS 1478212 1478523 1 + 0 ID=LTnewLM_360048500.1:CDS:1;Parent=LTnewLM_360048500.1 ### LTnewLM_36 . polypeptide 1478212 1478523 . + . ID=LTnewLM_360048500.1:pep;Derives_from=LTnewLM_360048500.1;orthologous_to=LmjF.36.3770_mRNA;ortholog_cluster=OG0006464;product=term%3DNAC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01849 LTnewLM_36 Pfam protein_match 1478320 1478484 . + . Parent=LTnewLM_360048500.1:pep;Name=PF01849;signature_desc=NAC domain ### LTnewLM_36 AUGUSTUS gene 1480273 1481223 1 + . ID=LTnewLM_360048600 LTnewLM_36 AUGUSTUS mRNA 1480273 1481223 1 + . ID=LTnewLM_360048600.1;Parent=LTnewLM_360048600 LTnewLM_36 AUGUSTUS CDS 1480273 1481223 1 + 0 ID=LTnewLM_360048600.1:CDS:1;Parent=LTnewLM_360048600.1 ### LTnewLM_36 . polypeptide 1480273 1481223 . + . ID=LTnewLM_360048600.1:pep;Derives_from=LTnewLM_360048600.1;orthologous_to=LmjF.36.3780_mRNA;ortholog_cluster=OG0006465;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_36 Pfam protein_match 1480315 1480377 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1480384 1480437 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1480456 1480506 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1480531 1480590 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1480786 1480848 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1480927 1480977 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_36 Pfam protein_match 1481002 1481055 . + . Parent=LTnewLM_360048600.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_36 . pseudogene 1483584 1486488 . + . ID=LTnewLM_360048700:pseudogene;coverage=0.998;sequence_ID=0.907;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3790_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1483584 1486488 . + . ID=LTnewLM_360048700.1;Parent=LTnewLM_360048700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1483584 1486488 . + . ID=LTnewLM_360048700.1:pseudogenic_exon:1;Parent=LTnewLM_360048700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1483584 1486488 . + . ID=LTnewLM_360048700.1:pep;Derives_from=LTnewLM_360048700.1;orthologous_to=LmjF.36.3790_mRNA;ortholog_cluster=OG0007689;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 1487546 1488729 . + . ID=LTnewLM_360048800:pseudogene;coverage=0.999;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.3800_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1487546 1488729 . + . ID=LTnewLM_360048800.1;Parent=LTnewLM_360048800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1487546 1488729 . + . ID=LTnewLM_360048800.1:pseudogenic_exon:1;Parent=LTnewLM_360048800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1487546 1488729 . + . ID=LTnewLM_360048800.1:pep;Derives_from=LTnewLM_360048800.1;orthologous_to=LTnewLM_360048900.1,LmjF.36.3800_mRNA,LmjF.36.3810_mRNA;ortholog_cluster=OG0000261;product=term%3DAminomethyltransferase folate-binding domain/Glycine cleavage T-protein C-terminal barrel domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01571|Pfam:PF08669 LTnewLM_36 Pfam protein_match 1487573 1488325 . + . Parent=LTnewLM_360048800.1:pep;Name=PF01571;signature_desc=Aminomethyltransferase folate-binding domain LTnewLM_36 Pfam protein_match 1488425 1488646 . + . Parent=LTnewLM_360048800.1:pep;Name=PF08669;signature_desc=Glycine cleavage T-protein C-terminal barrel domain ### LTnewLM_36 AUGUSTUS gene 1493003 1494136 1 + . ID=LTnewLM_360048900 LTnewLM_36 AUGUSTUS mRNA 1493003 1494136 1 + . ID=LTnewLM_360048900.1;Parent=LTnewLM_360048900 LTnewLM_36 AUGUSTUS CDS 1493003 1494136 1 + 0 ID=LTnewLM_360048900.1:CDS:1;Parent=LTnewLM_360048900.1 ### LTnewLM_36 . polypeptide 1493003 1494136 . + . ID=LTnewLM_360048900.1:pep;Derives_from=LTnewLM_360048900.1;orthologous_to=LTnewLM_360048800.1,LmjF.36.3800_mRNA,LmjF.36.3810_mRNA;ortholog_cluster=OG0000261;product=term%3DAminomethyltransferase folate-binding domain/Glycine cleavage T-protein C-terminal barrel domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01571|Pfam:PF08669 LTnewLM_36 Pfam protein_match 1493030 1493782 . + . Parent=LTnewLM_360048900.1:pep;Name=PF01571;signature_desc=Aminomethyltransferase folate-binding domain LTnewLM_36 Pfam protein_match 1493882 1494103 . + . Parent=LTnewLM_360048900.1:pep;Name=PF08669;signature_desc=Glycine cleavage T-protein C-terminal barrel domain ### LTnewLM_36 AUGUSTUS gene 1496506 1496901 1 + . ID=LTnewLM_360049000 LTnewLM_36 AUGUSTUS mRNA 1496506 1496901 1 + . ID=LTnewLM_360049000.1;Parent=LTnewLM_360049000 LTnewLM_36 AUGUSTUS CDS 1496506 1496901 1 + 0 ID=LTnewLM_360049000.1:CDS:1;Parent=LTnewLM_360049000.1 ### LTnewLM_36 . polypeptide 1496506 1496901 . + . ID=LTnewLM_360049000.1:pep;Derives_from=LTnewLM_360049000.1;orthologous_to=LmjF.36.3820_mRNA;ortholog_cluster=OG0006466;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1498547 1499485 1 + . ID=LTnewLM_360049100 LTnewLM_36 AUGUSTUS mRNA 1498547 1499485 1 + . ID=LTnewLM_360049100.1;Parent=LTnewLM_360049100 LTnewLM_36 AUGUSTUS CDS 1498547 1499485 1 + 0 ID=LTnewLM_360049100.1:CDS:1;Parent=LTnewLM_360049100.1 ### LTnewLM_36 . polypeptide 1498547 1499485 . + . ID=LTnewLM_360049100.1:pep;Derives_from=LTnewLM_360049100.1;orthologous_to=LmjF.36.3830_mRNA;ortholog_cluster=OG0006467;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920 LTnewLM_36 Pfam protein_match 1498868 1498990 . + . Parent=LTnewLM_360049100.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_36 Pfam protein_match 1499333 1499461 . + . Parent=LTnewLM_360049100.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_36 AUGUSTUS gene 1502377 1502580 1 + . ID=LTnewLM_360049200 LTnewLM_36 AUGUSTUS mRNA 1502377 1502580 1 + . ID=LTnewLM_360049200.1;Parent=LTnewLM_360049200 LTnewLM_36 AUGUSTUS CDS 1502377 1502580 1 + 0 ID=LTnewLM_360049200.1:CDS:1;Parent=LTnewLM_360049200.1 ### LTnewLM_36 . polypeptide 1502377 1502580 . + . ID=LTnewLM_360049200.1:pep;Derives_from=LTnewLM_360049200.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1503360 1505246 1 + . ID=LTnewLM_360049300 LTnewLM_36 AUGUSTUS mRNA 1503360 1505246 1 + . ID=LTnewLM_360049300.1;Parent=LTnewLM_360049300 LTnewLM_36 AUGUSTUS CDS 1503360 1505246 1 + 0 ID=LTnewLM_360049300.1:CDS:1;Parent=LTnewLM_360049300.1 ### LTnewLM_36 . polypeptide 1503360 1505246 . + . ID=LTnewLM_360049300.1:pep;Derives_from=LTnewLM_360049300.1;orthologous_to=LmjF.36.3840_mRNA;ortholog_cluster=OG0006468;product=term%3DAnticodon binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03129 LTnewLM_36 Pfam protein_match 1504896 1505162 . + . Parent=LTnewLM_360049300.1:pep;Name=PF03129;signature_desc=Anticodon binding domain ### LTnewLM_36 AUGUSTUS gene 1507688 1508365 1 + . ID=LTnewLM_360049400 LTnewLM_36 AUGUSTUS mRNA 1507688 1508365 1 + . ID=LTnewLM_360049400.1;Parent=LTnewLM_360049400 LTnewLM_36 AUGUSTUS CDS 1507688 1508365 1 + 0 ID=LTnewLM_360049400.1:CDS:1;Parent=LTnewLM_360049400.1 ### LTnewLM_36 . polypeptide 1507688 1508365 . + . ID=LTnewLM_360049400.1:pep;Derives_from=LTnewLM_360049400.1;orthologous_to=LmjF.36.3850_mRNA;ortholog_cluster=OG0006469;product=term%3DSnf7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03357;Ontology_term=GO:0007034 LTnewLM_36 Pfam protein_match 1507775 1508278 . + . Parent=LTnewLM_360049400.1:pep;Name=PF03357;signature_desc=Snf7;Ontology_term=GO:0007034 ### LTnewLM_36 AUGUSTUS gene 1511473 1513482 1 + . ID=LTnewLM_360049500 LTnewLM_36 AUGUSTUS mRNA 1511473 1513482 1 + . ID=LTnewLM_360049500.1;Parent=LTnewLM_360049500 LTnewLM_36 AUGUSTUS CDS 1511473 1513482 1 + 0 ID=LTnewLM_360049500.1:CDS:1;Parent=LTnewLM_360049500.1 ### LTnewLM_36 . polypeptide 1511473 1513482 . + . ID=LTnewLM_360049500.1:pep;Derives_from=LTnewLM_360049500.1;orthologous_to=LmjF.36.3860_mRNA;ortholog_cluster=OG0006470;product=term%3DMale gamete fusion factor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10699 LTnewLM_36 Pfam protein_match 1511824 1513356 . + . Parent=LTnewLM_360049500.1:pep;Name=PF10699;signature_desc=Male gamete fusion factor ### LTnewLM_36 AUGUSTUS gene 1514735 1517260 1 + . ID=LTnewLM_360049600 LTnewLM_36 AUGUSTUS mRNA 1514735 1517260 1 + . ID=LTnewLM_360049600.1;Parent=LTnewLM_360049600 LTnewLM_36 AUGUSTUS CDS 1514735 1517260 1 + 0 ID=LTnewLM_360049600.1:CDS:1;Parent=LTnewLM_360049600.1 ### LTnewLM_36 . polypeptide 1514735 1517260 . + . ID=LTnewLM_360049600.1:pep;Derives_from=LTnewLM_360049600.1;orthologous_to=LmjF.36.3870_mRNA;ortholog_cluster=OG0006471;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1517896 1518966 1 + . ID=LTnewLM_360049700 LTnewLM_36 AUGUSTUS mRNA 1517896 1518966 1 + . ID=LTnewLM_360049700.1;Parent=LTnewLM_360049700 LTnewLM_36 AUGUSTUS CDS 1517896 1518966 1 + 0 ID=LTnewLM_360049700.1:CDS:1;Parent=LTnewLM_360049700.1 ### LTnewLM_36 . polypeptide 1517896 1518966 . + . ID=LTnewLM_360049700.1:pep;Derives_from=LTnewLM_360049700.1;orthologous_to=LmjF.36.3880_mRNA;ortholog_cluster=OG0006472;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1517929 1518012 . + . Parent=LTnewLM_360049700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1518802 1518906 . + . Parent=LTnewLM_360049700.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1520430 1521614 1 + . ID=LTnewLM_360049800 LTnewLM_36 AUGUSTUS mRNA 1520430 1521614 1 + . ID=LTnewLM_360049800.1;Parent=LTnewLM_360049800 LTnewLM_36 AUGUSTUS CDS 1520430 1521614 1 + 0 ID=LTnewLM_360049800.1:CDS:1;Parent=LTnewLM_360049800.1 ### LTnewLM_36 . polypeptide 1520430 1521614 . + . ID=LTnewLM_360049800.1:pep;Derives_from=LTnewLM_360049800.1;orthologous_to=LmjF.36.3890_mRNA;ortholog_cluster=OG0006473;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1522519 1523346 1 + . ID=LTnewLM_360049900 LTnewLM_36 AUGUSTUS mRNA 1522519 1523346 1 + . ID=LTnewLM_360049900.1;Parent=LTnewLM_360049900 LTnewLM_36 AUGUSTUS CDS 1522519 1523346 1 + 0 ID=LTnewLM_360049900.1:CDS:1;Parent=LTnewLM_360049900.1 ### LTnewLM_36 . polypeptide 1522519 1523346 . + . ID=LTnewLM_360049900.1:pep;Derives_from=LTnewLM_360049900.1;orthologous_to=LmjF.36.3900_mRNA;ortholog_cluster=OG0006474;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1524287 1525600 1 + . ID=LTnewLM_360050000 LTnewLM_36 AUGUSTUS mRNA 1524287 1525600 1 + . ID=LTnewLM_360050000.1;Parent=LTnewLM_360050000 LTnewLM_36 AUGUSTUS CDS 1524287 1525600 1 + 0 ID=LTnewLM_360050000.1:CDS:1;Parent=LTnewLM_360050000.1 ### LTnewLM_36 . polypeptide 1524287 1525600 . + . ID=LTnewLM_360050000.1:pep;Derives_from=LTnewLM_360050000.1;orthologous_to=LmjF.36.3910_mRNA;ortholog_cluster=OG0006475;product=term%3DS-adenosyl-L-homocysteine hydrolase/S-adenosyl-L-homocysteine hydrolase%2C NAD binding domain/D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain/Acetohydroxy acid isomeroreductase%2C NADPH-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05221|Pfam:PF00670|Pfam:PF02826|Pfam:PF07991;Ontology_term=GO:0004013,GO:0004455,GO:0006730,GO:0055114,GO:0051287,GO:0008652 LTnewLM_36 Pfam protein_match 1524293 1524703 . + . Parent=LTnewLM_360050000.1:pep;Name=PF05221;signature_desc=S-adenosyl-L-homocysteine hydrolase;Ontology_term=GO:0004013,GO:0006730 LTnewLM_36 Pfam protein_match 1524707 1525591 . + . Parent=LTnewLM_360050000.1:pep;Name=PF05221;signature_desc=S-adenosyl-L-homocysteine hydrolase;Ontology_term=GO:0004013,GO:0006730 LTnewLM_36 Pfam protein_match 1524854 1525336 . + . Parent=LTnewLM_360050000.1:pep;Name=PF00670;signature_desc=S-adenosyl-L-homocysteine hydrolase%2C NAD binding domain LTnewLM_36 Pfam protein_match 1524911 1525180 . + . Parent=LTnewLM_360050000.1:pep;Name=PF02826;signature_desc=D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain;Ontology_term=GO:0051287,GO:0055114 LTnewLM_36 Pfam protein_match 1524914 1525108 . + . Parent=LTnewLM_360050000.1:pep;Name=PF07991;signature_desc=Acetohydroxy acid isomeroreductase%2C NADPH-binding domain;Ontology_term=GO:0004455,GO:0008652,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 1528386 1528787 1 + . ID=LTnewLM_360050100 LTnewLM_36 AUGUSTUS mRNA 1528386 1528787 1 + . ID=LTnewLM_360050100.1;Parent=LTnewLM_360050100 LTnewLM_36 AUGUSTUS CDS 1528386 1528787 1 + 0 ID=LTnewLM_360050100.1:CDS:1;Parent=LTnewLM_360050100.1 ### LTnewLM_36 . polypeptide 1528386 1528787 . + . ID=LTnewLM_360050100.1:pep;Derives_from=LTnewLM_360050100.1;orthologous_to=LmjF.36.3920_mRNA;ortholog_cluster=OG0006476;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1529737 1534092 1 + . ID=LTnewLM_360050200 LTnewLM_36 AUGUSTUS mRNA 1529737 1534092 1 + . ID=LTnewLM_360050200.1;Parent=LTnewLM_360050200 LTnewLM_36 AUGUSTUS CDS 1529737 1534092 1 + 0 ID=LTnewLM_360050200.1:CDS:1;Parent=LTnewLM_360050200.1 ### LTnewLM_36 . polypeptide 1529737 1534092 . + . ID=LTnewLM_360050200.1:pep;Derives_from=LTnewLM_360050200.1;orthologous_to=LmjF.36.3930_mRNA;ortholog_cluster=OG0006477;product=term%3DTelomerase ribonucleoprotein complex - RNA binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12009;Ontology_term=GO:0003964 LTnewLM_36 Pfam protein_match 1531231 1531698 . + . Parent=LTnewLM_360050200.1:pep;Name=PF12009;signature_desc=Telomerase ribonucleoprotein complex - RNA binding domain;Ontology_term=GO:0003964 ### LTnewLM_36 AUGUSTUS gene 1535277 1538561 1 + . ID=LTnewLM_360050300 LTnewLM_36 AUGUSTUS mRNA 1535277 1538561 1 + . ID=LTnewLM_360050300.1;Parent=LTnewLM_360050300 LTnewLM_36 AUGUSTUS CDS 1535277 1538561 1 + 0 ID=LTnewLM_360050300.1:CDS:1;Parent=LTnewLM_360050300.1 ### LTnewLM_36 . polypeptide 1535277 1538561 . + . ID=LTnewLM_360050300.1:pep;Derives_from=LTnewLM_360050300.1;orthologous_to=LmjF.36.3940_mRNA;ortholog_cluster=OG0006478;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1541607 1543019 1 + . ID=LTnewLM_360050400 LTnewLM_36 AUGUSTUS mRNA 1541607 1543019 1 + . ID=LTnewLM_360050400.1;Parent=LTnewLM_360050400 LTnewLM_36 AUGUSTUS CDS 1541607 1543019 1 + 0 ID=LTnewLM_360050400.1:CDS:1;Parent=LTnewLM_360050400.1 ### LTnewLM_36 . polypeptide 1541607 1543019 . + . ID=LTnewLM_360050400.1:pep;Derives_from=LTnewLM_360050400.1;orthologous_to=LmjF.36.3950_mRNA;ortholog_cluster=OG0006479;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1544525 1547554 1 + . ID=LTnewLM_360050500 LTnewLM_36 AUGUSTUS mRNA 1544525 1547554 1 + . ID=LTnewLM_360050500.1;Parent=LTnewLM_360050500 LTnewLM_36 AUGUSTUS CDS 1544525 1547554 1 + 0 ID=LTnewLM_360050500.1:CDS:1;Parent=LTnewLM_360050500.1 ### LTnewLM_36 . polypeptide 1544525 1547554 . + . ID=LTnewLM_360050500.1:pep;Derives_from=LTnewLM_360050500.1;orthologous_to=LmjF.36.3960_mRNA;ortholog_cluster=OG0006480;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1548815 1552891 1 + . ID=LTnewLM_360050600 LTnewLM_36 AUGUSTUS mRNA 1548815 1552891 1 + . ID=LTnewLM_360050600.1;Parent=LTnewLM_360050600 LTnewLM_36 AUGUSTUS CDS 1548815 1552891 1 + 0 ID=LTnewLM_360050600.1:CDS:1;Parent=LTnewLM_360050600.1 ### LTnewLM_36 . polypeptide 1548815 1552891 . + . ID=LTnewLM_360050600.1:pep;Derives_from=LTnewLM_360050600.1;orthologous_to=LmjF.36.3970_mRNA;ortholog_cluster=OG0006481;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1553371 1553610 1 + . ID=LTnewLM_360050700 LTnewLM_36 AUGUSTUS mRNA 1553371 1553610 1 + . ID=LTnewLM_360050700.1;Parent=LTnewLM_360050700 LTnewLM_36 AUGUSTUS CDS 1553371 1553610 1 + 0 ID=LTnewLM_360050700.1:CDS:1;Parent=LTnewLM_360050700.1 ### LTnewLM_36 . polypeptide 1553371 1553610 . + . ID=LTnewLM_360050700.1:pep;Derives_from=LTnewLM_360050700.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1554924 1555307 1 + . ID=LTnewLM_360050800 LTnewLM_36 AUGUSTUS mRNA 1554924 1555307 1 + . ID=LTnewLM_360050800.1;Parent=LTnewLM_360050800 LTnewLM_36 AUGUSTUS CDS 1554924 1555307 1 + 0 ID=LTnewLM_360050800.1:CDS:1;Parent=LTnewLM_360050800.1 ### LTnewLM_36 . polypeptide 1554924 1555307 . + . ID=LTnewLM_360050800.1:pep;Derives_from=LTnewLM_360050800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1556993 1558084 1 + . ID=LTnewLM_360050900 LTnewLM_36 AUGUSTUS mRNA 1556993 1558084 1 + . ID=LTnewLM_360050900.1;Parent=LTnewLM_360050900 LTnewLM_36 AUGUSTUS CDS 1556993 1558084 1 + 0 ID=LTnewLM_360050900.1:CDS:1;Parent=LTnewLM_360050900.1 ### LTnewLM_36 . polypeptide 1556993 1558084 . + . ID=LTnewLM_360050900.1:pep;Derives_from=LTnewLM_360050900.1;orthologous_to=LmjF.36.3980_mRNA;ortholog_cluster=OG0006482;product=term%3DRNA pol II accessory factor%2C Cdc73 family%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05179 LTnewLM_36 Pfam protein_match 1557512 1558018 . + . Parent=LTnewLM_360050900.1:pep;Name=PF05179;signature_desc=RNA pol II accessory factor%2C Cdc73 family%2C C-terminal ### LTnewLM_36 AUGUSTUS gene 1560511 1561173 1 + . ID=LTnewLM_360051000 LTnewLM_36 AUGUSTUS mRNA 1560511 1561173 1 + . ID=LTnewLM_360051000.1;Parent=LTnewLM_360051000 LTnewLM_36 AUGUSTUS CDS 1560511 1561173 1 + 0 ID=LTnewLM_360051000.1:CDS:1;Parent=LTnewLM_360051000.1 ### LTnewLM_36 . polypeptide 1560511 1561173 . + . ID=LTnewLM_360051000.1:pep;Derives_from=LTnewLM_360051000.1;orthologous_to=LmjF.36.3990_mRNA;ortholog_cluster=OG0006483;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_36 Pfam protein_match 1560577 1561086 . + . Parent=LTnewLM_360051000.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_36 AUGUSTUS gene 1562843 1565062 1 + . ID=LTnewLM_360051100 LTnewLM_36 AUGUSTUS mRNA 1562843 1565062 1 + . ID=LTnewLM_360051100.1;Parent=LTnewLM_360051100 LTnewLM_36 AUGUSTUS CDS 1562843 1565062 1 + 0 ID=LTnewLM_360051100.1:CDS:1;Parent=LTnewLM_360051100.1 ### LTnewLM_36 . polypeptide 1562843 1565062 . + . ID=LTnewLM_360051100.1:pep;Derives_from=LTnewLM_360051100.1;orthologous_to=LTnewLM_260009900.1,LmjF.26.0490_mRNA;ortholog_cluster=OG0000402;product=term%3DNucleotidyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01909;Ontology_term=GO:0016779 LTnewLM_36 Pfam protein_match 1563500 1563625 . + . Parent=LTnewLM_360051100.1:pep;Name=PF01909;signature_desc=Nucleotidyltransferase domain;Ontology_term=GO:0016779 ### LTnewLM_36 AUGUSTUS gene 1566351 1566935 1 + . ID=LTnewLM_360051200 LTnewLM_36 AUGUSTUS mRNA 1566351 1566935 1 + . ID=LTnewLM_360051200.1;Parent=LTnewLM_360051200 LTnewLM_36 AUGUSTUS CDS 1566351 1566935 1 + 0 ID=LTnewLM_360051200.1:CDS:1;Parent=LTnewLM_360051200.1 ### LTnewLM_36 . polypeptide 1566351 1566935 . + . ID=LTnewLM_360051200.1:pep;Derives_from=LTnewLM_360051200.1;orthologous_to=LmjF.36.4000_mRNA;ortholog_cluster=OG0006484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1568386 1569966 1 + . ID=LTnewLM_360051300 LTnewLM_36 AUGUSTUS mRNA 1568386 1569966 1 + . ID=LTnewLM_360051300.1;Parent=LTnewLM_360051300 LTnewLM_36 AUGUSTUS CDS 1568386 1569966 1 + 0 ID=LTnewLM_360051300.1:CDS:1;Parent=LTnewLM_360051300.1 ### LTnewLM_36 . polypeptide 1568386 1569966 . + . ID=LTnewLM_360051300.1:pep;Derives_from=LTnewLM_360051300.1;orthologous_to=LmjF.36.4010_mRNA;ortholog_cluster=OG0006485;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1570880 1571710 1 + . ID=LTnewLM_360051400 LTnewLM_36 AUGUSTUS mRNA 1570880 1571710 1 + . ID=LTnewLM_360051400.1;Parent=LTnewLM_360051400 LTnewLM_36 AUGUSTUS CDS 1570880 1571710 1 + 0 ID=LTnewLM_360051400.1:CDS:1;Parent=LTnewLM_360051400.1 ### LTnewLM_36 . polypeptide 1570880 1571710 . + . ID=LTnewLM_360051400.1:pep;Derives_from=LTnewLM_360051400.1;orthologous_to=LmjF.36.4020_mRNA;ortholog_cluster=OG0006486;product=term%3DSnare region anchored in the vesicle membrane C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12352 LTnewLM_36 Pfam protein_match 1571486 1571638 . + . Parent=LTnewLM_360051400.1:pep;Name=PF12352;signature_desc=Snare region anchored in the vesicle membrane C-terminus ### LTnewLM_36 AUGUSTUS gene 1573145 1577812 1 + . ID=LTnewLM_360051500 LTnewLM_36 AUGUSTUS mRNA 1573145 1577812 1 + . ID=LTnewLM_360051500.1;Parent=LTnewLM_360051500 LTnewLM_36 AUGUSTUS CDS 1573145 1577812 1 + 0 ID=LTnewLM_360051500.1:CDS:1;Parent=LTnewLM_360051500.1 ### LTnewLM_36 . polypeptide 1573145 1577812 . + . ID=LTnewLM_360051500.1:pep;Derives_from=LTnewLM_360051500.1;orthologous_to=LmjF.36.4030_mRNA;ortholog_cluster=OG0006487;product=term%3DCytosolic carboxypeptidase N-terminal domain/Zinc carboxypeptidase/Succinylglutamate desuccinylase / Aspartoacylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18027|Pfam:PF00246|Pfam:PF04952;Ontology_term=GO:0008270,GO:0008152,GO:0016788,GO:0006508,GO:0004181 LTnewLM_36 Pfam protein_match 1575839 1576186 . + . Parent=LTnewLM_360051500.1:pep;Name=PF18027;signature_desc=Cytosolic carboxypeptidase N-terminal domain LTnewLM_36 Pfam protein_match 1576298 1576834 . + . Parent=LTnewLM_360051500.1:pep;Name=PF00246;signature_desc=Zinc carboxypeptidase;Ontology_term=GO:0004181,GO:0008270,GO:0006508 LTnewLM_36 Pfam protein_match 1576595 1577008 . + . Parent=LTnewLM_360051500.1:pep;Name=PF04952;signature_desc=Succinylglutamate desuccinylase / Aspartoacylase family;Ontology_term=GO:0016788,GO:0008152 ### LTnewLM_36 AUGUSTUS gene 1578953 1580245 1 + . ID=LTnewLM_360051600 LTnewLM_36 AUGUSTUS mRNA 1578953 1580245 1 + . ID=LTnewLM_360051600.1;Parent=LTnewLM_360051600 LTnewLM_36 AUGUSTUS CDS 1578953 1580245 1 + 0 ID=LTnewLM_360051600.1:CDS:1;Parent=LTnewLM_360051600.1 ### LTnewLM_36 . polypeptide 1578953 1580245 . + . ID=LTnewLM_360051600.1:pep;Derives_from=LTnewLM_360051600.1;orthologous_to=LmjF.36.4040_mRNA;ortholog_cluster=OG0006488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1581481 1582740 1 + . ID=LTnewLM_360051700 LTnewLM_36 AUGUSTUS mRNA 1581481 1582740 1 + . ID=LTnewLM_360051700.1;Parent=LTnewLM_360051700 LTnewLM_36 AUGUSTUS CDS 1581481 1582740 1 + 0 ID=LTnewLM_360051700.1:CDS:1;Parent=LTnewLM_360051700.1 ### LTnewLM_36 . polypeptide 1581481 1582740 . + . ID=LTnewLM_360051700.1:pep;Derives_from=LTnewLM_360051700.1;orthologous_to=LmjF.36.4050_mRNA;ortholog_cluster=OG0006489;product=term%3DTatD related DNase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01026;Ontology_term=GO:0016888 LTnewLM_36 Pfam protein_match 1581568 1582233 . + . Parent=LTnewLM_360051700.1:pep;Name=PF01026;signature_desc=TatD related DNase;Ontology_term=GO:0016888 ### LTnewLM_36 AUGUSTUS gene 1583482 1585554 1 + . ID=LTnewLM_360051800 LTnewLM_36 AUGUSTUS mRNA 1583482 1585554 1 + . ID=LTnewLM_360051800.1;Parent=LTnewLM_360051800 LTnewLM_36 AUGUSTUS CDS 1583482 1585554 1 + 0 ID=LTnewLM_360051800.1:CDS:1;Parent=LTnewLM_360051800.1 ### LTnewLM_36 . polypeptide 1583482 1585554 . + . ID=LTnewLM_360051800.1:pep;Derives_from=LTnewLM_360051800.1;orthologous_to=LmjF.36.4060_mRNA;ortholog_cluster=OG0006490;product=term%3DRegulator of chromosome condensation (RCC1) repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00415|Pfam:PF13540 LTnewLM_36 Pfam protein_match 1583803 1583943 . + . Parent=LTnewLM_360051800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1583908 1583994 . + . Parent=LTnewLM_360051800.1:pep;Name=PF13540;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1584136 1584321 . + . Parent=LTnewLM_360051800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat LTnewLM_36 Pfam protein_match 1584337 1584486 . + . Parent=LTnewLM_360051800.1:pep;Name=PF00415;signature_desc=Regulator of chromosome condensation (RCC1) repeat ### LTnewLM_36 AUGUSTUS gene 1587645 1588688 1 + . ID=LTnewLM_360051900 LTnewLM_36 AUGUSTUS mRNA 1587645 1588688 1 + . ID=LTnewLM_360051900.1;Parent=LTnewLM_360051900 LTnewLM_36 AUGUSTUS CDS 1587645 1588688 1 + 0 ID=LTnewLM_360051900.1:CDS:1;Parent=LTnewLM_360051900.1 ### LTnewLM_36 . polypeptide 1587645 1588688 . + . ID=LTnewLM_360051900.1:pep;Derives_from=LTnewLM_360051900.1;orthologous_to=LmjF.36.4070_mRNA;ortholog_cluster=OG0006491;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_36 Pfam protein_match 1588482 1588613 . + . Parent=LTnewLM_360051900.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_36 AUGUSTUS gene 1591825 1593426 1 + . ID=LTnewLM_360052000 LTnewLM_36 AUGUSTUS mRNA 1591825 1593426 1 + . ID=LTnewLM_360052000.1;Parent=LTnewLM_360052000 LTnewLM_36 AUGUSTUS CDS 1591825 1593426 1 + 0 ID=LTnewLM_360052000.1:CDS:1;Parent=LTnewLM_360052000.1 ### LTnewLM_36 . polypeptide 1591825 1593426 . + . ID=LTnewLM_360052000.1:pep;Derives_from=LTnewLM_360052000.1;orthologous_to=LmjF.36.4080_mRNA;ortholog_cluster=OG0006492;product=term%3DIQ calmodulin-binding motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00612;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1592020 1592073 . + . Parent=LTnewLM_360052000.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1592098 1592142 . + . Parent=LTnewLM_360052000.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1592206 1592247 . + . Parent=LTnewLM_360052000.1:pep;Name=PF00612;signature_desc=IQ calmodulin-binding motif;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1594690 1595988 1 + . ID=LTnewLM_360052100 LTnewLM_36 AUGUSTUS mRNA 1594690 1595988 1 + . ID=LTnewLM_360052100.1;Parent=LTnewLM_360052100 LTnewLM_36 AUGUSTUS CDS 1594690 1595988 1 + 0 ID=LTnewLM_360052100.1:CDS:1;Parent=LTnewLM_360052100.1 ### LTnewLM_36 . polypeptide 1594690 1595988 . + . ID=LTnewLM_360052100.1:pep;Derives_from=LTnewLM_360052100.1;orthologous_to=LmjF.36.4090_mRNA;ortholog_cluster=OG0006493;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1597870 1602282 1 + . ID=LTnewLM_360052200 LTnewLM_36 AUGUSTUS mRNA 1597870 1602282 1 + . ID=LTnewLM_360052200.1;Parent=LTnewLM_360052200 LTnewLM_36 AUGUSTUS CDS 1597870 1602282 1 + 0 ID=LTnewLM_360052200.1:CDS:1;Parent=LTnewLM_360052200.1 ### LTnewLM_36 . polypeptide 1597870 1602282 . + . ID=LTnewLM_360052200.1:pep;Derives_from=LTnewLM_360052200.1;orthologous_to=LmjF.36.4100_mRNA;ortholog_cluster=OG0006494;product=term%3DGlycosyl hydrolases family 31%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01055;Ontology_term=GO:0004553,GO:0005975 LTnewLM_36 Pfam protein_match 1599460 1601265 . + . Parent=LTnewLM_360052200.1:pep;Name=PF01055;signature_desc=Glycosyl hydrolases family 31;Ontology_term=GO:0004553,GO:0005975 ### LTnewLM_36 AUGUSTUS gene 1603566 1606628 1 + . ID=LTnewLM_360052300 LTnewLM_36 AUGUSTUS mRNA 1603566 1606628 1 + . ID=LTnewLM_360052300.1;Parent=LTnewLM_360052300 LTnewLM_36 AUGUSTUS CDS 1603566 1606628 1 + 0 ID=LTnewLM_360052300.1:CDS:1;Parent=LTnewLM_360052300.1 ### LTnewLM_36 . polypeptide 1603566 1606628 . + . ID=LTnewLM_360052300.1:pep;Derives_from=LTnewLM_360052300.1;orthologous_to=LmjF.36.4110_mRNA;ortholog_cluster=OG0006495;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1607188 1607751 1 + . ID=LTnewLM_360052400 LTnewLM_36 AUGUSTUS mRNA 1607188 1607751 1 + . ID=LTnewLM_360052400.1;Parent=LTnewLM_360052400 LTnewLM_36 AUGUSTUS CDS 1607188 1607751 1 + 0 ID=LTnewLM_360052400.1:CDS:1;Parent=LTnewLM_360052400.1 ### LTnewLM_36 . polypeptide 1607188 1607751 . + . ID=LTnewLM_360052400.1:pep;Derives_from=LTnewLM_360052400.1;orthologous_to=LmjF.36.4120_mRNA;ortholog_cluster=OG0006496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1608507 1609220 1 + . ID=LTnewLM_360052500 LTnewLM_36 AUGUSTUS mRNA 1608507 1609220 1 + . ID=LTnewLM_360052500.1;Parent=LTnewLM_360052500 LTnewLM_36 AUGUSTUS CDS 1608507 1609220 1 + 0 ID=LTnewLM_360052500.1:CDS:1;Parent=LTnewLM_360052500.1 ### LTnewLM_36 . polypeptide 1608507 1609220 . + . ID=LTnewLM_360052500.1:pep;Derives_from=LTnewLM_360052500.1;orthologous_to=LmjF.36.4130_mRNA;ortholog_cluster=OG0006497;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_36 Pfam protein_match 1608855 1609175 . + . Parent=LTnewLM_360052500.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_36 AUGUSTUS gene 1612174 1612773 1 + . ID=LTnewLM_360052600 LTnewLM_36 AUGUSTUS mRNA 1612174 1612773 1 + . ID=LTnewLM_360052600.1;Parent=LTnewLM_360052600 LTnewLM_36 AUGUSTUS CDS 1612174 1612773 1 + 0 ID=LTnewLM_360052600.1:CDS:1;Parent=LTnewLM_360052600.1 ### LTnewLM_36 . polypeptide 1612174 1612773 . + . ID=LTnewLM_360052600.1:pep;Derives_from=LTnewLM_360052600.1;orthologous_to=LmjF.36.4140_mRNA;ortholog_cluster=OG0006498;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_36 Pfam protein_match 1612213 1612707 . + . Parent=LTnewLM_360052600.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_36 AUGUSTUS gene 1616465 1617034 1 + . ID=LTnewLM_360052700 LTnewLM_36 AUGUSTUS mRNA 1616465 1617034 1 + . ID=LTnewLM_360052700.1;Parent=LTnewLM_360052700 LTnewLM_36 AUGUSTUS CDS 1616465 1617034 1 + 0 ID=LTnewLM_360052700.1:CDS:1;Parent=LTnewLM_360052700.1 ### LTnewLM_36 . polypeptide 1616465 1617034 . + . ID=LTnewLM_360052700.1:pep;Derives_from=LTnewLM_360052700.1;orthologous_to=LmjF.36.4145_mRNA;ortholog_cluster=OG0006499;product=term%3DTranscription factor S-II (TFIIS)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01096;Ontology_term=GO:0006351,GO:0008270,GO:0003676 LTnewLM_36 Pfam protein_match 1616906 1617019 . + . Parent=LTnewLM_360052700.1:pep;Name=PF01096;signature_desc=Transcription factor S-II (TFIIS);Ontology_term=GO:0003676,GO:0008270,GO:0006351 ### LTnewLM_36 AUGUSTUS gene 1617827 1619791 1 + . ID=LTnewLM_360052800 LTnewLM_36 AUGUSTUS mRNA 1617827 1619791 1 + . ID=LTnewLM_360052800.1;Parent=LTnewLM_360052800 LTnewLM_36 AUGUSTUS CDS 1617827 1619791 1 + 0 ID=LTnewLM_360052800.1:CDS:1;Parent=LTnewLM_360052800.1 ### LTnewLM_36 . polypeptide 1617827 1619791 . + . ID=LTnewLM_360052800.1:pep;Derives_from=LTnewLM_360052800.1;orthologous_to=LmjF.36.4150_mRNA;ortholog_cluster=OG0006500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1620934 1621893 1 + . ID=LTnewLM_360052900 LTnewLM_36 AUGUSTUS mRNA 1620934 1621893 1 + . ID=LTnewLM_360052900.1;Parent=LTnewLM_360052900 LTnewLM_36 AUGUSTUS CDS 1620934 1621893 1 + 0 ID=LTnewLM_360052900.1:CDS:1;Parent=LTnewLM_360052900.1 ### LTnewLM_36 . polypeptide 1620934 1621893 . + . ID=LTnewLM_360052900.1:pep;Derives_from=LTnewLM_360052900.1;orthologous_to=LmjF.36.4160_mRNA;ortholog_cluster=OG0006501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1622700 1623722 1 + . ID=LTnewLM_360053000 LTnewLM_36 AUGUSTUS mRNA 1622700 1623722 1 + . ID=LTnewLM_360053000.1;Parent=LTnewLM_360053000 LTnewLM_36 AUGUSTUS CDS 1622700 1623722 1 + 0 ID=LTnewLM_360053000.1:CDS:1;Parent=LTnewLM_360053000.1 ### LTnewLM_36 . polypeptide 1622700 1623722 . + . ID=LTnewLM_360053000.1:pep;Derives_from=LTnewLM_360053000.1;orthologous_to=LmjF.36.4170_mRNA;ortholog_cluster=OG0006502;product=term%3DAlcohol dehydrogenase GroES-like domain/Zinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240|Pfam:PF00107|Pfam:PF13602;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_36 Pfam protein_match 1622808 1622987 . + . Parent=LTnewLM_360053000.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_36 Pfam protein_match 1623168 1623575 . + . Parent=LTnewLM_360053000.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 LTnewLM_36 Pfam protein_match 1623270 1623707 . + . Parent=LTnewLM_360053000.1:pep;Name=PF13602;signature_desc=Zinc-binding dehydrogenase ### LTnewLM_36 AUGUSTUS gene 1626107 1627507 1 + . ID=LTnewLM_360053100 LTnewLM_36 AUGUSTUS mRNA 1626107 1627507 1 + . ID=LTnewLM_360053100.1;Parent=LTnewLM_360053100 LTnewLM_36 AUGUSTUS CDS 1626107 1627507 1 + 0 ID=LTnewLM_360053100.1:CDS:1;Parent=LTnewLM_360053100.1 ### LTnewLM_36 . polypeptide 1626107 1627507 . + . ID=LTnewLM_360053100.1:pep;Derives_from=LTnewLM_360053100.1;orthologous_to=LmjF.36.4180_mRNA;ortholog_cluster=OG0006503;product=term%3DGlycosyl transferase family 4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00953;Ontology_term=GO:0008963,GO:0016021 LTnewLM_36 Pfam protein_match 1626491 1627201 . + . Parent=LTnewLM_360053100.1:pep;Name=PF00953;signature_desc=Glycosyl transferase family 4;Ontology_term=GO:0008963,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 1628538 1629566 1 + . ID=LTnewLM_360053200 LTnewLM_36 AUGUSTUS mRNA 1628538 1629566 1 + . ID=LTnewLM_360053200.1;Parent=LTnewLM_360053200 LTnewLM_36 AUGUSTUS CDS 1628538 1629566 1 + 0 ID=LTnewLM_360053200.1:CDS:1;Parent=LTnewLM_360053200.1 ### LTnewLM_36 . polypeptide 1628538 1629566 . + . ID=LTnewLM_360053200.1:pep;Derives_from=LTnewLM_360053200.1;orthologous_to=LmjF.36.4190_mRNA;ortholog_cluster=OG0006504;product=term%3DGINS complex protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05916 LTnewLM_36 Pfam protein_match 1628763 1629137 . + . Parent=LTnewLM_360053200.1:pep;Name=PF05916;signature_desc=GINS complex protein ### LTnewLM_36 AUGUSTUS gene 1631270 1633699 1 + . ID=LTnewLM_360053300 LTnewLM_36 AUGUSTUS mRNA 1631270 1633699 1 + . ID=LTnewLM_360053300.1;Parent=LTnewLM_360053300 LTnewLM_36 AUGUSTUS CDS 1631270 1633699 1 + 0 ID=LTnewLM_360053300.1:CDS:1;Parent=LTnewLM_360053300.1 ### LTnewLM_36 . polypeptide 1631270 1633699 . + . ID=LTnewLM_360053300.1:pep;Derives_from=LTnewLM_360053300.1;orthologous_to=LmjF.36.4200_mRNA;ortholog_cluster=OG0006505;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1635992 1638938 0.68 + . ID=LTnewLM_360053400 LTnewLM_36 AUGUSTUS mRNA 1635992 1638938 0.68 + . ID=LTnewLM_360053400.1;Parent=LTnewLM_360053400 LTnewLM_36 AUGUSTUS CDS 1635992 1636493 0.92 + 0 ID=LTnewLM_360053400.1:CDS:1;Parent=LTnewLM_360053400.1 LTnewLM_36 AUGUSTUS CDS 1636540 1638938 0.68 + 2 ID=LTnewLM_360053400.1:CDS:2;Parent=LTnewLM_360053400.1 ### LTnewLM_36 . polypeptide 1635992 1638938 . + . ID=LTnewLM_360053400.1:pep;Derives_from=LTnewLM_360053400.1;orthologous_to=LmjF.36.4210_mRNA;ortholog_cluster=OG0006506;product=term%3DAnaphase-promoting complex subunit 4 WD40 domain/WD domain%2C G-beta repeat/Utp21 specific WD40 associated putative domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12894|Pfam:PF00400|Pfam:PF04192;Ontology_term=GO:0006364,GO:0005515,GO:0032040 LTnewLM_36 Pfam protein_match 1636553 1636750 . + . Parent=LTnewLM_360053400.1:pep;Name=PF12894;signature_desc=Anaphase-promoting complex subunit 4 WD40 domain LTnewLM_36 Pfam protein_match 1637429 1637521 . + . Parent=LTnewLM_360053400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1637684 1637797 . + . Parent=LTnewLM_360053400.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1638257 1638865 . + . Parent=LTnewLM_360053400.1:pep;Name=PF04192;signature_desc=Utp21 specific WD40 associated putative domain;Ontology_term=GO:0006364,GO:0032040 ### LTnewLM_36 AUGUSTUS gene 1640145 1641980 1 + . ID=LTnewLM_360053500 LTnewLM_36 AUGUSTUS mRNA 1640145 1641980 1 + . ID=LTnewLM_360053500.1;Parent=LTnewLM_360053500 LTnewLM_36 AUGUSTUS CDS 1640145 1641980 1 + 0 ID=LTnewLM_360053500.1:CDS:1;Parent=LTnewLM_360053500.1 ### LTnewLM_36 . polypeptide 1640145 1641980 . + . ID=LTnewLM_360053500.1:pep;Derives_from=LTnewLM_360053500.1;orthologous_to=LmjF.36.4220_mRNA;ortholog_cluster=OG0006507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Aragorn_1.2.36 gene 1642237 1642311 . - . ID=LTnewLM_360053600 LTnewLM_36 Aragorn_1.2.36 tRNA 1642237 1642311 . - . ID=LTnewLM_360053600:tRNA;Parent=LTnewLM_360053600;aa=Gln;anticodon=ctg;gc_content=52.0 ### LTnewLM_36 . pseudogene 1643077 1646314 5.39e+03 + . ID=LTnewLM_360053700:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;has_stop=true;Target=LmjF.36.4230:mRNA 1 1079;original_prot_length=1079 LTnewLM_36 . pseudogenic_transcript 1643077 1646314 . + . ID=LTnewLM_360053700.1;Parent=LTnewLM_360053700:pseudogene LTnewLM_36 . pseudogenic_exon 1643077 1643385 . + . ID=LTnewLM_360053700.1:pseudogenic_exon:1;Parent=LTnewLM_360053700.1 LTnewLM_36 . pseudogenic_exon 1643387 1646314 . + . ID=LTnewLM_360053700.1:pseudogenic_exon:2;Parent=LTnewLM_360053700.1 ### LTnewLM_36 . polypeptide 1643077 1646314 . + . ID=LTnewLM_360053700.1:pep;Derives_from=LTnewLM_360053700.1;orthologous_to=LmjF.36.4230_mRNA;ortholog_cluster=OG0007690;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_36 Pfam protein_match 1644133 1644201 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1644535 1644600 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1644619 1644684 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1645015 1645083 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1645498 1645542 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1645582 1645641 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1645897 1645962 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1645981 1646043 . + . Parent=LTnewLM_360053700.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_36 . pseudogene 1647132 1649252 . + . ID=LTnewLM_360053800:pseudogene;coverage=0.998;sequence_ID=0.934;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.4240_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1647132 1649252 . + . ID=LTnewLM_360053800.1;Parent=LTnewLM_360053800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1647132 1649252 . + . ID=LTnewLM_360053800.1:pseudogenic_exon:1;Parent=LTnewLM_360053800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1647132 1649252 . + . ID=LTnewLM_360053800.1:pep;Derives_from=LTnewLM_360053800.1;orthologous_to=LmjF.36.4240_mRNA;ortholog_cluster=OG0007691;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1653726 1656149 1 + . ID=LTnewLM_360053900 LTnewLM_36 AUGUSTUS mRNA 1653726 1656149 1 + . ID=LTnewLM_360053900.1;Parent=LTnewLM_360053900 LTnewLM_36 AUGUSTUS CDS 1653726 1656149 1 + 0 ID=LTnewLM_360053900.1:CDS:1;Parent=LTnewLM_360053900.1 ### LTnewLM_36 . polypeptide 1653726 1656149 . + . ID=LTnewLM_360053900.1:pep;Derives_from=LTnewLM_360053900.1;orthologous_to=LmjF.36.4250_mRNA;ortholog_cluster=OG0006508;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 1653780 1654163 . + . Parent=LTnewLM_360053900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1653783 1654169 . + . Parent=LTnewLM_360053900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 1654707 1655321 . + . Parent=LTnewLM_360053900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1671352 1672647 1 + . ID=LTnewLM_360054000 LTnewLM_36 AUGUSTUS mRNA 1671352 1672647 1 + . ID=LTnewLM_360054000.1;Parent=LTnewLM_360054000 LTnewLM_36 AUGUSTUS CDS 1671352 1672647 1 + 0 ID=LTnewLM_360054000.1:CDS:1;Parent=LTnewLM_360054000.1 ### LTnewLM_36 . polypeptide 1671352 1672647 . + . ID=LTnewLM_360054000.1:pep;Derives_from=LTnewLM_360054000.1;orthologous_to=LmjF.36.4260_mRNA;ortholog_cluster=OG0006509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1674092 1679152 1 + . ID=LTnewLM_360054100 LTnewLM_36 AUGUSTUS mRNA 1674092 1679152 1 + . ID=LTnewLM_360054100.1;Parent=LTnewLM_360054100 LTnewLM_36 AUGUSTUS CDS 1674092 1679152 1 + 0 ID=LTnewLM_360054100.1:CDS:1;Parent=LTnewLM_360054100.1 ### LTnewLM_36 . polypeptide 1674092 1679152 . + . ID=LTnewLM_360054100.1:pep;Derives_from=LTnewLM_360054100.1;orthologous_to=LmjF.36.4270_mRNA;ortholog_cluster=OG0006510;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1680871 1683345 1 + . ID=LTnewLM_360054200 LTnewLM_36 AUGUSTUS mRNA 1680871 1683345 1 + . ID=LTnewLM_360054200.1;Parent=LTnewLM_360054200 LTnewLM_36 AUGUSTUS CDS 1680871 1683345 1 + 0 ID=LTnewLM_360054200.1:CDS:1;Parent=LTnewLM_360054200.1 ### LTnewLM_36 . polypeptide 1680871 1683345 . + . ID=LTnewLM_360054200.1:pep;Derives_from=LTnewLM_360054200.1;orthologous_to=LmjF.36.4280_mRNA;ortholog_cluster=OG0006511;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1684683 1688378 1 + . ID=LTnewLM_360054300 LTnewLM_36 AUGUSTUS mRNA 1684683 1688378 1 + . ID=LTnewLM_360054300.1;Parent=LTnewLM_360054300 LTnewLM_36 AUGUSTUS CDS 1684683 1688378 1 + 0 ID=LTnewLM_360054300.1:CDS:1;Parent=LTnewLM_360054300.1 ### LTnewLM_36 . polypeptide 1684683 1688378 . + . ID=LTnewLM_360054300.1:pep;Derives_from=LTnewLM_360054300.1;orthologous_to=LmjF.36.4290_mRNA;ortholog_cluster=OG0006512;product=term%3DPH domain/ADP-ribosylation factor family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00169|Pfam:PF00025;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 1684761 1685030 . + . Parent=LTnewLM_360054300.1:pep;Name=PF00169;signature_desc=PH domain LTnewLM_36 Pfam protein_match 1687734 1688147 . + . Parent=LTnewLM_360054300.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 ### LTnewLM_36 AUGUSTUS gene 1691901 1694150 1 + . ID=LTnewLM_360054400 LTnewLM_36 AUGUSTUS mRNA 1691901 1694150 1 + . ID=LTnewLM_360054400.1;Parent=LTnewLM_360054400 LTnewLM_36 AUGUSTUS CDS 1691901 1694150 1 + 0 ID=LTnewLM_360054400.1:CDS:1;Parent=LTnewLM_360054400.1 ### LTnewLM_36 . polypeptide 1691901 1694150 . + . ID=LTnewLM_360054400.1:pep;Derives_from=LTnewLM_360054400.1;orthologous_to=LmjF.36.4300_mRNA;ortholog_cluster=OG0006513;product=term%3DCHAP domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05257 LTnewLM_36 Pfam protein_match 1692039 1692335 . + . Parent=LTnewLM_360054400.1:pep;Name=PF05257;signature_desc=CHAP domain ### LTnewLM_36 AUGUSTUS gene 1694880 1696508 1 + . ID=LTnewLM_360054500 LTnewLM_36 AUGUSTUS mRNA 1694880 1696508 1 + . ID=LTnewLM_360054500.1;Parent=LTnewLM_360054500 LTnewLM_36 AUGUSTUS CDS 1694880 1696508 1 + 0 ID=LTnewLM_360054500.1:CDS:1;Parent=LTnewLM_360054500.1 ### LTnewLM_36 . polypeptide 1694880 1696508 . + . ID=LTnewLM_360054500.1:pep;Derives_from=LTnewLM_360054500.1;orthologous_to=LmjF.36.4310_mRNA;ortholog_cluster=OG0006514;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1695027 1695758 . + . Parent=LTnewLM_360054500.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1698099 1704680 1 + . ID=LTnewLM_360054600 LTnewLM_36 AUGUSTUS mRNA 1698099 1704680 1 + . ID=LTnewLM_360054600.1;Parent=LTnewLM_360054600 LTnewLM_36 AUGUSTUS CDS 1698099 1704680 1 + 0 ID=LTnewLM_360054600.1:CDS:1;Parent=LTnewLM_360054600.1 ### LTnewLM_36 . polypeptide 1698099 1704680 . + . ID=LTnewLM_360054600.1:pep;Derives_from=LTnewLM_360054600.1;orthologous_to=LmjF.36.4320_mRNA;ortholog_cluster=OG0006515;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1698102 1698317 . + . Parent=LTnewLM_360054600.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1700541 1700831 . + . Parent=LTnewLM_360054600.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1701519 1701812 . + . Parent=LTnewLM_360054600.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1702656 1702928 . + . Parent=LTnewLM_360054600.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1708082 1712905 1 + . ID=LTnewLM_360054700 LTnewLM_36 AUGUSTUS mRNA 1708082 1712905 1 + . ID=LTnewLM_360054700.1;Parent=LTnewLM_360054700 LTnewLM_36 AUGUSTUS CDS 1708082 1712905 1 + 0 ID=LTnewLM_360054700.1:CDS:1;Parent=LTnewLM_360054700.1 ### LTnewLM_36 . polypeptide 1708082 1712905 . + . ID=LTnewLM_360054700.1:pep;Derives_from=LTnewLM_360054700.1;orthologous_to=LmjF.36.4330_mRNA;ortholog_cluster=OG0006516;product=term%3DC2 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1708847 1709179 . + . Parent=LTnewLM_360054700.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1709447 1709701 . + . Parent=LTnewLM_360054700.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1709993 1710250 . + . Parent=LTnewLM_360054700.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1710614 1710871 . + . Parent=LTnewLM_360054700.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1715128 1716783 1 + . ID=LTnewLM_360054800 LTnewLM_36 AUGUSTUS mRNA 1715128 1716783 1 + . ID=LTnewLM_360054800.1;Parent=LTnewLM_360054800 LTnewLM_36 AUGUSTUS CDS 1715128 1716783 1 + 0 ID=LTnewLM_360054800.1:CDS:1;Parent=LTnewLM_360054800.1 ### LTnewLM_36 . polypeptide 1715128 1716783 . + . ID=LTnewLM_360054800.1:pep;Derives_from=LTnewLM_360054800.1;orthologous_to=LmjF.36.4340_mRNA;ortholog_cluster=OG0006517;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1718242 1720911 1 + . ID=LTnewLM_360054900 LTnewLM_36 AUGUSTUS mRNA 1718242 1720911 1 + . ID=LTnewLM_360054900.1;Parent=LTnewLM_360054900 LTnewLM_36 AUGUSTUS CDS 1718242 1720911 1 + 0 ID=LTnewLM_360054900.1:CDS:1;Parent=LTnewLM_360054900.1 ### LTnewLM_36 . polypeptide 1718242 1720911 . + . ID=LTnewLM_360054900.1:pep;Derives_from=LTnewLM_360054900.1;orthologous_to=LmjF.36.4350_mRNA;ortholog_cluster=OG0006518;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1723274 1724503 1 + . ID=LTnewLM_360055000 LTnewLM_36 AUGUSTUS mRNA 1723274 1724503 1 + . ID=LTnewLM_360055000.1;Parent=LTnewLM_360055000 LTnewLM_36 AUGUSTUS CDS 1723274 1724503 1 + 0 ID=LTnewLM_360055000.1:CDS:1;Parent=LTnewLM_360055000.1 ### LTnewLM_36 . polypeptide 1723274 1724503 . + . ID=LTnewLM_360055000.1:pep;Derives_from=LTnewLM_360055000.1;orthologous_to=LmjF.36.4360_mRNA;ortholog_cluster=OG0006519;product=term%3DProteasomal ATPase OB C-terminal domain/AAA domain (dynein-related subfamily)/AAA domain (Cdc48 subfamily)/ATPase family associated with various cellular activities (AAA)/AAA+ lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16450|Pfam:PF07728|Pfam:PF07724|Pfam:PF00004|Pfam:PF17862;Ontology_term=GO:0016887,GO:0005524 LTnewLM_36 Pfam protein_match 1723493 1723660 . + . Parent=LTnewLM_360055000.1:pep;Name=PF16450;signature_desc=Proteasomal ATPase OB C-terminal domain LTnewLM_36 Pfam protein_match 1723835 1724176 . + . Parent=LTnewLM_360055000.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_36 Pfam protein_match 1723838 1724113 . + . Parent=LTnewLM_360055000.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 1723838 1724233 . + . Parent=LTnewLM_360055000.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 1724306 1724428 . + . Parent=LTnewLM_360055000.1:pep;Name=PF17862;signature_desc=AAA+ lid domain ### LTnewLM_36 AUGUSTUS gene 1729198 1736859 1 + . ID=LTnewLM_360055100 LTnewLM_36 AUGUSTUS mRNA 1729198 1736859 1 + . ID=LTnewLM_360055100.1;Parent=LTnewLM_360055100 LTnewLM_36 AUGUSTUS CDS 1729198 1736859 1 + 0 ID=LTnewLM_360055100.1:CDS:1;Parent=LTnewLM_360055100.1 ### LTnewLM_36 . polypeptide 1729198 1736859 . + . ID=LTnewLM_360055100.1:pep;Derives_from=LTnewLM_360055100.1;orthologous_to=LmjF.36.4370_mRNA;ortholog_cluster=OG0006520;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_36 Pfam protein_match 1735699 1736841 . + . Parent=LTnewLM_360055100.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_36 Liftoff gene 1738533 1740014 . + . ID=LTnewLM_360055200;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.4380_0 LTnewLM_36 Liftoff mRNA 1738533 1740014 . + . ID=LTnewLM_360055200.1;Parent=LTnewLM_360055200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1738533 1740014 . + 0 ID=LTnewLM_360055200.1:CDS:1;Parent=LTnewLM_360055200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1738533 1740014 . + . ID=LTnewLM_360055200.1:pep;Derives_from=LTnewLM_360055200.1;orthologous_to=LmjF.36.4380_mRNA;ortholog_cluster=OG0006521;product=term%3DAlternative oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01786;Ontology_term=GO:0055114,GO:0009916 LTnewLM_36 Pfam protein_match 1738827 1739948 . + . Parent=LTnewLM_360055200.1:pep;Name=PF01786;signature_desc=Alternative oxidase;Ontology_term=GO:0009916,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 1740950 1743547 1 + . ID=LTnewLM_360055300 LTnewLM_36 AUGUSTUS mRNA 1740950 1743547 1 + . ID=LTnewLM_360055300.1;Parent=LTnewLM_360055300 LTnewLM_36 AUGUSTUS CDS 1740950 1743547 1 + 0 ID=LTnewLM_360055300.1:CDS:1;Parent=LTnewLM_360055300.1 ### LTnewLM_36 . polypeptide 1740950 1743547 . + . ID=LTnewLM_360055300.1:pep;Derives_from=LTnewLM_360055300.1;orthologous_to=LmjF.36.4390_mRNA;ortholog_cluster=OG0006522;product=term%3DGamma tubulin complex component N-terminal/Gamma tubulin complex component C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17681|Pfam:PF04130;Ontology_term=GO:0000922,GO:0005815,GO:0000226 LTnewLM_36 Pfam protein_match 1741355 1742362 . + . Parent=LTnewLM_360055300.1:pep;Name=PF17681;signature_desc=Gamma tubulin complex component N-terminal LTnewLM_36 Pfam protein_match 1742534 1743478 . + . Parent=LTnewLM_360055300.1:pep;Name=PF04130;signature_desc=Gamma tubulin complex component C-terminal;Ontology_term=GO:0000226,GO:0000922,GO:0005815 ### LTnewLM_36 AUGUSTUS gene 1746522 1749419 1 + . ID=LTnewLM_360055400 LTnewLM_36 AUGUSTUS mRNA 1746522 1749419 1 + . ID=LTnewLM_360055400.1;Parent=LTnewLM_360055400 LTnewLM_36 AUGUSTUS CDS 1746522 1749419 1 + 0 ID=LTnewLM_360055400.1:CDS:1;Parent=LTnewLM_360055400.1 ### LTnewLM_36 . polypeptide 1746522 1749419 . + . ID=LTnewLM_360055400.1:pep;Derives_from=LTnewLM_360055400.1;orthologous_to=LmjF.36.4400_mRNA;ortholog_cluster=OG0006523;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1747278 1747841 . + . Parent=LTnewLM_360055400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 1748595 1748918 . + . Parent=LTnewLM_360055400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_36 AUGUSTUS gene 1750588 1751172 1 + . ID=LTnewLM_360055500 LTnewLM_36 AUGUSTUS mRNA 1750588 1751172 1 + . ID=LTnewLM_360055500.1;Parent=LTnewLM_360055500 LTnewLM_36 AUGUSTUS CDS 1750588 1751172 1 + 0 ID=LTnewLM_360055500.1:CDS:1;Parent=LTnewLM_360055500.1 ### LTnewLM_36 . polypeptide 1750588 1751172 . + . ID=LTnewLM_360055500.1:pep;Derives_from=LTnewLM_360055500.1;orthologous_to=LmjF.36.4410_mRNA;ortholog_cluster=OG0006524;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1751881 1752270 1 + . ID=LTnewLM_360055600 LTnewLM_36 AUGUSTUS mRNA 1751881 1752270 1 + . ID=LTnewLM_360055600.1;Parent=LTnewLM_360055600 LTnewLM_36 AUGUSTUS CDS 1751881 1752270 1 + 0 ID=LTnewLM_360055600.1:CDS:1;Parent=LTnewLM_360055600.1 ### LTnewLM_36 . polypeptide 1751881 1752270 . + . ID=LTnewLM_360055600.1:pep;Derives_from=LTnewLM_360055600.1;product=term%3DRibosomal L22e protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01776;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1751947 1752264 . + . Parent=LTnewLM_360055600.1:pep;Name=PF01776;signature_desc=Ribosomal L22e protein family;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1753630 1754739 1 + . ID=LTnewLM_360055700 LTnewLM_36 AUGUSTUS mRNA 1753630 1754739 1 + . ID=LTnewLM_360055700.1;Parent=LTnewLM_360055700 LTnewLM_36 AUGUSTUS CDS 1753630 1754739 1 + 0 ID=LTnewLM_360055700.1:CDS:1;Parent=LTnewLM_360055700.1 ### LTnewLM_36 . polypeptide 1753630 1754739 . + . ID=LTnewLM_360055700.1:pep;Derives_from=LTnewLM_360055700.1;orthologous_to=LmjF.36.4430_mRNA;ortholog_cluster=OG0006525;product=term%3DAsparaginase%2C N-terminal/Glutaminase/Asparaginase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00710|Pfam:PF17763;Ontology_term=GO:0006520 LTnewLM_36 Pfam protein_match 1753840 1754259 . + . Parent=LTnewLM_360055700.1:pep;Name=PF00710;signature_desc=Asparaginase%2C N-terminal;Ontology_term=GO:0006520 LTnewLM_36 Pfam protein_match 1754338 1754688 . + . Parent=LTnewLM_360055700.1:pep;Name=PF17763;signature_desc=Glutaminase/Asparaginase C-terminal domain ### LTnewLM_36 AUGUSTUS gene 1755846 1756694 1 + . ID=LTnewLM_360055800 LTnewLM_36 AUGUSTUS mRNA 1755846 1756694 1 + . ID=LTnewLM_360055800.1;Parent=LTnewLM_360055800 LTnewLM_36 AUGUSTUS CDS 1755846 1756694 1 + 0 ID=LTnewLM_360055800.1:CDS:1;Parent=LTnewLM_360055800.1 ### LTnewLM_36 . polypeptide 1755846 1756694 . + . ID=LTnewLM_360055800.1:pep;Derives_from=LTnewLM_360055800.1;orthologous_to=LmjF.36.4440_mRNA;ortholog_cluster=OG0006526;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1757817 1759847 1 + . ID=LTnewLM_360055900 LTnewLM_36 AUGUSTUS mRNA 1757817 1759847 1 + . ID=LTnewLM_360055900.1;Parent=LTnewLM_360055900 LTnewLM_36 AUGUSTUS CDS 1757817 1759847 1 + 0 ID=LTnewLM_360055900.1:CDS:1;Parent=LTnewLM_360055900.1 ### LTnewLM_36 . polypeptide 1757817 1759847 . + . ID=LTnewLM_360055900.1:pep;Derives_from=LTnewLM_360055900.1;orthologous_to=LmjF.36.4450_mRNA;ortholog_cluster=OG0006527;product=term%3DPeptidase family M3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01432;Ontology_term=GO:0004222,GO:0006508 LTnewLM_36 Pfam protein_match 1758471 1759448 . + . Parent=LTnewLM_360055900.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 LTnewLM_36 Pfam protein_match 1759605 1759817 . + . Parent=LTnewLM_360055900.1:pep;Name=PF01432;signature_desc=Peptidase family M3;Ontology_term=GO:0004222,GO:0006508 ### LTnewLM_36 AUGUSTUS gene 1761197 1761679 1 + . ID=LTnewLM_360056000 LTnewLM_36 AUGUSTUS mRNA 1761197 1761679 1 + . ID=LTnewLM_360056000.1;Parent=LTnewLM_360056000 LTnewLM_36 AUGUSTUS CDS 1761197 1761679 1 + 0 ID=LTnewLM_360056000.1:CDS:1;Parent=LTnewLM_360056000.1 ### LTnewLM_36 . polypeptide 1761197 1761679 . + . ID=LTnewLM_360056000.1:pep;Derives_from=LTnewLM_360056000.1;orthologous_to=LmjF.36.4460_mRNA;ortholog_cluster=OG0006528;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1763205 1764032 1 + . ID=LTnewLM_360056100 LTnewLM_36 AUGUSTUS mRNA 1763205 1764032 1 + . ID=LTnewLM_360056100.1;Parent=LTnewLM_360056100 LTnewLM_36 AUGUSTUS CDS 1763205 1764032 1 + 0 ID=LTnewLM_360056100.1:CDS:1;Parent=LTnewLM_360056100.1 ### LTnewLM_36 . polypeptide 1763205 1764032 . + . ID=LTnewLM_360056100.1:pep;Derives_from=LTnewLM_360056100.1;orthologous_to=LmjF.36.4470_mRNA;ortholog_cluster=OG0006529;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_36 Pfam protein_match 1763226 1763399 . + . Parent=LTnewLM_360056100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_36 AUGUSTUS gene 1765846 1768215 1 + . ID=LTnewLM_360056200 LTnewLM_36 AUGUSTUS mRNA 1765846 1768215 1 + . ID=LTnewLM_360056200.1;Parent=LTnewLM_360056200 LTnewLM_36 AUGUSTUS CDS 1765846 1768215 1 + 0 ID=LTnewLM_360056200.1:CDS:1;Parent=LTnewLM_360056200.1 ### LTnewLM_36 . polypeptide 1765846 1768215 . + . ID=LTnewLM_360056200.1:pep;Derives_from=LTnewLM_360056200.1;orthologous_to=LmjF.36.4480_mRNA;ortholog_cluster=OG0006530;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_36 Pfam protein_match 1766674 1767975 . + . Parent=LTnewLM_360056200.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_36 AUGUSTUS gene 1769356 1770900 1 + . ID=LTnewLM_360056300 LTnewLM_36 AUGUSTUS mRNA 1769356 1770900 1 + . ID=LTnewLM_360056300.1;Parent=LTnewLM_360056300 LTnewLM_36 AUGUSTUS CDS 1769356 1770900 1 + 0 ID=LTnewLM_360056300.1:CDS:1;Parent=LTnewLM_360056300.1 ### LTnewLM_36 . polypeptide 1769356 1770900 . + . ID=LTnewLM_360056300.1:pep;Derives_from=LTnewLM_360056300.1;orthologous_to=LmjF.36.4490_mRNA;ortholog_cluster=OG0006531;product=term%3DubiE/COQ5 methyltransferase family/Methyltransferase domain/Ribosomal protein L11 methyltransferase (PrmA)/Methyltransferase small domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01209|Pfam:PF13847|Pfam:PF06325|Pfam:PF05175|Pfam:PF13649;Ontology_term=GO:0005737,GO:0006479,GO:0008276,GO:0008168 LTnewLM_36 Pfam protein_match 1770229 1770420 . + . Parent=LTnewLM_360056300.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 1770262 1770456 . + . Parent=LTnewLM_360056300.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 1770268 1770417 . + . Parent=LTnewLM_360056300.1:pep;Name=PF06325;signature_desc=Ribosomal protein L11 methyltransferase (PrmA);Ontology_term=GO:0008276,GO:0006479,GO:0005737 LTnewLM_36 Pfam protein_match 1770268 1770450 . + . Parent=LTnewLM_360056300.1:pep;Name=PF05175;signature_desc=Methyltransferase small domain;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 1770271 1770432 . + . Parent=LTnewLM_360056300.1:pep;Name=PF13649;signature_desc=Methyltransferase domain ### LTnewLM_36 AUGUSTUS gene 1771926 1772729 1 + . ID=LTnewLM_360056400 LTnewLM_36 AUGUSTUS mRNA 1771926 1772729 1 + . ID=LTnewLM_360056400.1;Parent=LTnewLM_360056400 LTnewLM_36 AUGUSTUS CDS 1771926 1772729 1 + 0 ID=LTnewLM_360056400.1:CDS:1;Parent=LTnewLM_360056400.1 ### LTnewLM_36 . polypeptide 1771926 1772729 . + . ID=LTnewLM_360056400.1:pep;Derives_from=LTnewLM_360056400.1;orthologous_to=LmjF.36.4500_mRNA;ortholog_cluster=OG0006532;product=term%3DCilia- and flagella-associated protein 298%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11069 LTnewLM_36 Pfam protein_match 1772421 1772705 . + . Parent=LTnewLM_360056400.1:pep;Name=PF11069;signature_desc=Cilia- and flagella-associated protein 298 ### LTnewLM_36 AUGUSTUS gene 1773685 1774281 1 + . ID=LTnewLM_360056500 LTnewLM_36 AUGUSTUS mRNA 1773685 1774281 1 + . ID=LTnewLM_360056500.1;Parent=LTnewLM_360056500 LTnewLM_36 AUGUSTUS CDS 1773685 1774281 1 + 0 ID=LTnewLM_360056500.1:CDS:1;Parent=LTnewLM_360056500.1 ### LTnewLM_36 . polypeptide 1773685 1774281 . + . ID=LTnewLM_360056500.1:pep;Derives_from=LTnewLM_360056500.1;orthologous_to=LTnewLM_130009900.1,LmjF.13.0560_mRNA,LmjF.36.4510_mRNA;ortholog_cluster=OG0000115;product=term%3DRibosomal protein 60S L18 and 50S L18e/Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17135|Pfam:PF00828 LTnewLM_36 Pfam protein_match 1773688 1774254 . + . Parent=LTnewLM_360056500.1:pep;Name=PF17135;signature_desc=Ribosomal protein 60S L18 and 50S L18e LTnewLM_36 Pfam protein_match 1773772 1774062 . + . Parent=LTnewLM_360056500.1:pep;Name=PF00828;signature_desc=Ribosomal proteins 50S-L15%2C 50S-L18e%2C 60S-L27A ### LTnewLM_36 AUGUSTUS gene 1775857 1779021 1 + . ID=LTnewLM_360056600 LTnewLM_36 AUGUSTUS mRNA 1775857 1779021 1 + . ID=LTnewLM_360056600.1;Parent=LTnewLM_360056600 LTnewLM_36 AUGUSTUS CDS 1775857 1779021 1 + 0 ID=LTnewLM_360056600.1:CDS:1;Parent=LTnewLM_360056600.1 ### LTnewLM_36 . polypeptide 1775857 1779021 . + . ID=LTnewLM_360056600.1:pep;Derives_from=LTnewLM_360056600.1;orthologous_to=LmjF.36.4520_mRNA;ortholog_cluster=OG0006533;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1780153 1781754 1 + . ID=LTnewLM_360056700 LTnewLM_36 AUGUSTUS mRNA 1780153 1781754 1 + . ID=LTnewLM_360056700.1;Parent=LTnewLM_360056700 LTnewLM_36 AUGUSTUS CDS 1780153 1781754 1 + 0 ID=LTnewLM_360056700.1:CDS:1;Parent=LTnewLM_360056700.1 ### LTnewLM_36 . polypeptide 1780153 1781754 . + . ID=LTnewLM_360056700.1:pep;Derives_from=LTnewLM_360056700.1;orthologous_to=LmjF.36.4530_mRNA;ortholog_cluster=OG0006534;product=term%3DABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03109 LTnewLM_36 Pfam protein_match 1780666 1781433 . + . Parent=LTnewLM_360056700.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_36 AUGUSTUS gene 1784361 1786364 1 + . ID=LTnewLM_360056800 LTnewLM_36 AUGUSTUS mRNA 1784361 1786364 1 + . ID=LTnewLM_360056800.1;Parent=LTnewLM_360056800 LTnewLM_36 AUGUSTUS CDS 1784361 1786364 1 + 0 ID=LTnewLM_360056800.1:CDS:1;Parent=LTnewLM_360056800.1 ### LTnewLM_36 . polypeptide 1784361 1786364 . + . ID=LTnewLM_360056800.1:pep;Derives_from=LTnewLM_360056800.1;orthologous_to=LmjF.36.4540_mRNA;ortholog_cluster=OG0006535;product=term%3DAlpha-kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02816;Ontology_term=GO:0004674,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 1785495 1786136 . + . Parent=LTnewLM_360056800.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1791501 1794926 1 + . ID=LTnewLM_360056900 LTnewLM_36 AUGUSTUS mRNA 1791501 1794926 1 + . ID=LTnewLM_360056900.1;Parent=LTnewLM_360056900 LTnewLM_36 AUGUSTUS CDS 1791501 1794926 1 + 0 ID=LTnewLM_360056900.1:CDS:1;Parent=LTnewLM_360056900.1 ### LTnewLM_36 . polypeptide 1791501 1794926 . + . ID=LTnewLM_360056900.1:pep;Derives_from=LTnewLM_360056900.1;orthologous_to=LmjF.36.4550_mRNA;ortholog_cluster=OG0006536;product=term%3DAlpha-kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02816;Ontology_term=GO:0004674,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 1792014 1792643 . + . Parent=LTnewLM_360056900.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1793388 1793636 . + . Parent=LTnewLM_360056900.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 1794159 1794800 . + . Parent=LTnewLM_360056900.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1800465 1801472 1 + . ID=LTnewLM_360057000 LTnewLM_36 AUGUSTUS mRNA 1800465 1801472 1 + . ID=LTnewLM_360057000.1;Parent=LTnewLM_360057000 LTnewLM_36 AUGUSTUS CDS 1800465 1801472 1 + 0 ID=LTnewLM_360057000.1:CDS:1;Parent=LTnewLM_360057000.1 ### LTnewLM_36 . polypeptide 1800465 1801472 . + . ID=LTnewLM_360057000.1:pep;Derives_from=LTnewLM_360057000.1;orthologous_to=LmjF.36.4700_mRNA;ortholog_cluster=OG0006537;product=term%3DAlpha-kinase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02816;Ontology_term=GO:0004674,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 1800612 1801256 . + . Parent=LTnewLM_360057000.1:pep;Name=PF02816;signature_desc=Alpha-kinase family;Ontology_term=GO:0004674,GO:0005524,GO:0006468 ### LTnewLM_36 AUGUSTUS gene 1804204 1805958 1 + . ID=LTnewLM_360057100 LTnewLM_36 AUGUSTUS mRNA 1804204 1805958 1 + . ID=LTnewLM_360057100.1;Parent=LTnewLM_360057100 LTnewLM_36 AUGUSTUS CDS 1804204 1805958 1 + 0 ID=LTnewLM_360057100.1:CDS:1;Parent=LTnewLM_360057100.1 ### LTnewLM_36 . polypeptide 1804204 1805958 . + . ID=LTnewLM_360057100.1:pep;Derives_from=LTnewLM_360057100.1;orthologous_to=LmjF.36.4560_mRNA;ortholog_cluster=OG0006538;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_36 Pfam protein_match 1805692 1805940 . + . Parent=LTnewLM_360057100.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_36 AUGUSTUS gene 1809783 1810751 1 + . ID=LTnewLM_360057200 LTnewLM_36 AUGUSTUS mRNA 1809783 1810751 1 + . ID=LTnewLM_360057200.1;Parent=LTnewLM_360057200 LTnewLM_36 AUGUSTUS CDS 1809783 1810751 1 + 0 ID=LTnewLM_360057200.1:CDS:1;Parent=LTnewLM_360057200.1 ### LTnewLM_36 . polypeptide 1809783 1810751 . + . ID=LTnewLM_360057200.1:pep;Derives_from=LTnewLM_360057200.1;orthologous_to=LmjF.36.4570_mRNA;ortholog_cluster=OG0006539;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1811662 1813020 1 + . ID=LTnewLM_360057300 LTnewLM_36 AUGUSTUS mRNA 1811662 1813020 1 + . ID=LTnewLM_360057300.1;Parent=LTnewLM_360057300 LTnewLM_36 AUGUSTUS CDS 1811662 1813020 1 + 0 ID=LTnewLM_360057300.1:CDS:1;Parent=LTnewLM_360057300.1 ### LTnewLM_36 . polypeptide 1811662 1813020 . + . ID=LTnewLM_360057300.1:pep;Derives_from=LTnewLM_360057300.1;orthologous_to=LmjF.36.4580_mRNA;ortholog_cluster=OG0006540;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1814947 1817397 1 + . ID=LTnewLM_360057400 LTnewLM_36 AUGUSTUS mRNA 1814947 1817397 1 + . ID=LTnewLM_360057400.1;Parent=LTnewLM_360057400 LTnewLM_36 AUGUSTUS CDS 1814947 1817397 1 + 0 ID=LTnewLM_360057400.1:CDS:1;Parent=LTnewLM_360057400.1 ### LTnewLM_36 . polypeptide 1814947 1817397 . + . ID=LTnewLM_360057400.1:pep;Derives_from=LTnewLM_360057400.1;orthologous_to=LmjF.36.4590_mRNA;ortholog_cluster=OG0006541;product=term%3DPHD-like zinc-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13771 LTnewLM_36 Pfam protein_match 1816327 1816566 . + . Parent=LTnewLM_360057400.1:pep;Name=PF13771;signature_desc=PHD-like zinc-binding domain ### LTnewLM_36 Liftoff gene 1818395 1818958 . + . ID=LTnewLM_360057500;coverage=0.996;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.4600_0 LTnewLM_36 Liftoff mRNA 1818395 1818958 . + . ID=LTnewLM_360057500.1;Parent=LTnewLM_360057500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1818395 1818958 . + 0 ID=LTnewLM_360057500.1:CDS:1;Parent=LTnewLM_360057500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1818395 1818958 . + . ID=LTnewLM_360057500.1:pep;Derives_from=LTnewLM_360057500.1;orthologous_to=LmjF.36.4600_mRNA;ortholog_cluster=OG0006542;product=term%3DPredicted membrane protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09799 LTnewLM_36 Pfam protein_match 1818539 1818859 . + . Parent=LTnewLM_360057500.1:pep;Name=PF09799;signature_desc=Predicted membrane protein ### LTnewLM_36 AUGUSTUS gene 1819752 1821170 1 + . ID=LTnewLM_360057600 LTnewLM_36 AUGUSTUS mRNA 1819752 1821170 1 + . ID=LTnewLM_360057600.1;Parent=LTnewLM_360057600 LTnewLM_36 AUGUSTUS CDS 1819752 1821170 1 + 0 ID=LTnewLM_360057600.1:CDS:1;Parent=LTnewLM_360057600.1 ### LTnewLM_36 . polypeptide 1819752 1821170 . + . ID=LTnewLM_360057600.1:pep;Derives_from=LTnewLM_360057600.1;orthologous_to=LmjF.36.4610_mRNA;ortholog_cluster=OG0006543;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1821888 1825610 1 + . ID=LTnewLM_360057700 LTnewLM_36 AUGUSTUS mRNA 1821888 1825610 1 + . ID=LTnewLM_360057700.1;Parent=LTnewLM_360057700 LTnewLM_36 AUGUSTUS CDS 1821888 1825610 1 + 0 ID=LTnewLM_360057700.1:CDS:1;Parent=LTnewLM_360057700.1 ### LTnewLM_36 . polypeptide 1821888 1825610 . + . ID=LTnewLM_360057700.1:pep;Derives_from=LTnewLM_360057700.1;orthologous_to=LmjF.36.4620_mRNA;ortholog_cluster=OG0006544;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 1828567 1829271 . + . ID=LTnewLM_360057800:pseudogene;coverage=1.0;sequence_ID=0.947;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.4630_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1828567 1829271 . + . ID=LTnewLM_360057800.1;Parent=LTnewLM_360057800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1828567 1829271 . + . ID=LTnewLM_360057800.1:pseudogenic_exon:1;Parent=LTnewLM_360057800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1828567 1829271 . + . ID=LTnewLM_360057800.1:pep;Derives_from=LTnewLM_360057800.1;orthologous_to=LmjF.36.4630_mRNA;ortholog_cluster=OG0007692;product=term%3DHam1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01725;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 1828585 1829217 . + . Parent=LTnewLM_360057800.1:pep;Name=PF01725;signature_desc=Ham1 family;Ontology_term=GO:0016787 ### LTnewLM_36 . pseudogene 1830684 1833626 . + . ID=LTnewLM_360057900:pseudogene;coverage=0.959;sequence_ID=0.852;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.4640_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1830684 1833626 . + . ID=LTnewLM_360057900.1;Parent=LTnewLM_360057900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1831600 1833626 . + . ID=LTnewLM_360057900.1:pseudogenic_exon:1;Parent=LTnewLM_360057900.1;extra_copy_number=0 LTnewLM_36 . pseudogenic_transcript 1831708 1833626 . + . ID=LTnewLM_360057900.2;Parent=LTnewLM_360057900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1831869 1833626 . + . ID=LTnewLM_360057900.2:pseudogenic_exon:1;Parent=LTnewLM_360057900.2;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1831600 1833626 . + . ID=LTnewLM_360057900.1:pep;Derives_from=LTnewLM_360057900.1;product=term%3Dhypothetical protein ### LTnewLM_36 . polypeptide 1831869 1833626 . + . ID=LTnewLM_360057900.2:pep;Derives_from=LTnewLM_360057900.2;orthologous_to=LmjF.36.4640.1_mRNA,LmjF.36.4640.2_mRNA;ortholog_cluster=OG0000549;product=term%3DEsterase PHB depolymerase/Phospholipase/Carboxylesterase/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10503|Pfam:PF02230|Pfam:PF00326;Ontology_term=GO:0006508,GO:0016787,GO:0008236 LTnewLM_36 Pfam protein_match 1832328 1832696 . + . Parent=LTnewLM_360057900.2:pep;Name=PF10503;signature_desc=Esterase PHB depolymerase LTnewLM_36 Pfam protein_match 1832343 1832816 . + . Parent=LTnewLM_360057900.2:pep;Name=PF02230;signature_desc=Phospholipase/Carboxylesterase;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 1832547 1832702 . + . Parent=LTnewLM_360057900.2:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 ### LTnewLM_36 AUGUSTUS gene 1834980 1835663 1 + . ID=LTnewLM_360058000 LTnewLM_36 AUGUSTUS mRNA 1834980 1835663 1 + . ID=LTnewLM_360058000.1;Parent=LTnewLM_360058000 LTnewLM_36 AUGUSTUS CDS 1834980 1835663 1 + 0 ID=LTnewLM_360058000.1:CDS:1;Parent=LTnewLM_360058000.1 ### LTnewLM_36 . polypeptide 1834980 1835663 . + . ID=LTnewLM_360058000.1:pep;Derives_from=LTnewLM_360058000.1;orthologous_to=LmjF.36.4650_mRNA;ortholog_cluster=OG0006545;product=term%3DRibosomal protein L10/Insertion domain in 60S ribosomal protein L10P%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00466|Pfam:PF17777;Ontology_term=GO:0042254,GO:0005622 LTnewLM_36 Pfam protein_match 1835031 1835330 . + . Parent=LTnewLM_360058000.1:pep;Name=PF00466;signature_desc=Ribosomal protein L10;Ontology_term=GO:0042254,GO:0005622 LTnewLM_36 Pfam protein_match 1835355 1835564 . + . Parent=LTnewLM_360058000.1:pep;Name=PF17777;signature_desc=Insertion domain in 60S ribosomal protein L10P ### LTnewLM_36 AUGUSTUS gene 1836889 1839684 1 + . ID=LTnewLM_360058100 LTnewLM_36 AUGUSTUS mRNA 1836889 1839684 1 + . ID=LTnewLM_360058100.1;Parent=LTnewLM_360058100 LTnewLM_36 AUGUSTUS CDS 1836889 1839684 1 + 0 ID=LTnewLM_360058100.1:CDS:1;Parent=LTnewLM_360058100.1 ### LTnewLM_36 . polypeptide 1836889 1839684 . + . ID=LTnewLM_360058100.1:pep;Derives_from=LTnewLM_360058100.1;orthologous_to=LmjF.36.4660_mRNA;ortholog_cluster=OG0006546;product=term%3DVacuolar sorting protein 9 (VPS9) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02204 LTnewLM_36 Pfam protein_match 1838572 1838943 . + . Parent=LTnewLM_360058100.1:pep;Name=PF02204;signature_desc=Vacuolar sorting protein 9 (VPS9) domain ### LTnewLM_36 AUGUSTUS gene 1840851 1841237 1 + . ID=LTnewLM_360058200 LTnewLM_36 AUGUSTUS mRNA 1840851 1841237 1 + . ID=LTnewLM_360058200.1;Parent=LTnewLM_360058200 LTnewLM_36 AUGUSTUS CDS 1840851 1841237 1 + 0 ID=LTnewLM_360058200.1:CDS:1;Parent=LTnewLM_360058200.1 ### LTnewLM_36 . polypeptide 1840851 1841237 . + . ID=LTnewLM_360058200.1:pep;Derives_from=LTnewLM_360058200.1;orthologous_to=LmjF.36.4670_mRNA;ortholog_cluster=OG0006547;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1842049 1842288 1 + . ID=LTnewLM_360058300 LTnewLM_36 AUGUSTUS mRNA 1842049 1842288 1 + . ID=LTnewLM_360058300.1;Parent=LTnewLM_360058300 LTnewLM_36 AUGUSTUS CDS 1842049 1842288 1 + 0 ID=LTnewLM_360058300.1:CDS:1;Parent=LTnewLM_360058300.1 ### LTnewLM_36 . polypeptide 1842049 1842288 . + . ID=LTnewLM_360058300.1:pep;Derives_from=LTnewLM_360058300.1;orthologous_to=LmjF.36.4675_mRNA;ortholog_cluster=OG0006548;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_36 Pfam protein_match 1842061 1842276 . + . Parent=LTnewLM_360058300.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_36 AUGUSTUS gene 1845956 1851394 1 + . ID=LTnewLM_360058400 LTnewLM_36 AUGUSTUS mRNA 1845956 1851394 1 + . ID=LTnewLM_360058400.1;Parent=LTnewLM_360058400 LTnewLM_36 AUGUSTUS CDS 1845956 1851394 1 + 0 ID=LTnewLM_360058400.1:CDS:1;Parent=LTnewLM_360058400.1 ### LTnewLM_36 . polypeptide 1845956 1851394 . + . ID=LTnewLM_360058400.1:pep;Derives_from=LTnewLM_360058400.1;orthologous_to=LmjF.36.4680_mRNA;ortholog_cluster=OG0006549;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1853172 1856147 1 + . ID=LTnewLM_360058500 LTnewLM_36 AUGUSTUS mRNA 1853172 1856147 1 + . ID=LTnewLM_360058500.1;Parent=LTnewLM_360058500 LTnewLM_36 AUGUSTUS CDS 1853172 1856147 1 + 0 ID=LTnewLM_360058500.1:CDS:1;Parent=LTnewLM_360058500.1 ### LTnewLM_36 . polypeptide 1853172 1856147 . + . ID=LTnewLM_360058500.1:pep;Derives_from=LTnewLM_360058500.1;orthologous_to=LmjF.36.4690_mRNA;ortholog_cluster=OG0006550;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1857741 1859924 1 + . ID=LTnewLM_360058600 LTnewLM_36 AUGUSTUS mRNA 1857741 1859924 1 + . ID=LTnewLM_360058600.1;Parent=LTnewLM_360058600 LTnewLM_36 AUGUSTUS CDS 1857741 1859924 1 + 0 ID=LTnewLM_360058600.1:CDS:1;Parent=LTnewLM_360058600.1 ### LTnewLM_36 . polypeptide 1857741 1859924 . + . ID=LTnewLM_360058600.1:pep;Derives_from=LTnewLM_360058600.1;orthologous_to=LmjF.36.4710_mRNA;ortholog_cluster=OG0006551;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1858029 1858112 . + . Parent=LTnewLM_360058600.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1860801 1861292 1 + . ID=LTnewLM_360058700 LTnewLM_36 AUGUSTUS mRNA 1860801 1861292 1 + . ID=LTnewLM_360058700.1;Parent=LTnewLM_360058700 LTnewLM_36 AUGUSTUS CDS 1860801 1861292 1 + 0 ID=LTnewLM_360058700.1:CDS:1;Parent=LTnewLM_360058700.1 ### LTnewLM_36 . polypeptide 1860801 1861292 . + . ID=LTnewLM_360058700.1:pep;Derives_from=LTnewLM_360058700.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1862182 1866618 1 + . ID=LTnewLM_360058800 LTnewLM_36 AUGUSTUS mRNA 1862182 1866618 1 + . ID=LTnewLM_360058800.1;Parent=LTnewLM_360058800 LTnewLM_36 AUGUSTUS CDS 1862182 1866618 1 + 0 ID=LTnewLM_360058800.1:CDS:1;Parent=LTnewLM_360058800.1 ### LTnewLM_36 . polypeptide 1862182 1866618 . + . ID=LTnewLM_360058800.1:pep;Derives_from=LTnewLM_360058800.1;orthologous_to=LmjF.36.4720_mRNA;ortholog_cluster=OG0006552;product=term%3DFlavodoxin/FAD binding domain/Oxidoreductase NAD-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00258|Pfam:PF00667|Pfam:PF00175;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_36 Pfam protein_match 1862227 1862634 . + . Parent=LTnewLM_360058800.1:pep;Name=PF00258;signature_desc=Flavodoxin;Ontology_term=GO:0010181,GO:0016491 LTnewLM_36 Pfam protein_match 1865293 1865826 . + . Parent=LTnewLM_360058800.1:pep;Name=PF00667;signature_desc=FAD binding domain;Ontology_term=GO:0016491,GO:0055114 LTnewLM_36 Pfam protein_match 1866064 1866492 . + . Parent=LTnewLM_360058800.1:pep;Name=PF00175;signature_desc=Oxidoreductase NAD-binding domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 1867852 1872285 1 + . ID=LTnewLM_360058900 LTnewLM_36 AUGUSTUS mRNA 1867852 1872285 1 + . ID=LTnewLM_360058900.1;Parent=LTnewLM_360058900 LTnewLM_36 AUGUSTUS CDS 1867852 1872285 1 + 0 ID=LTnewLM_360058900.1:CDS:1;Parent=LTnewLM_360058900.1 ### LTnewLM_36 . polypeptide 1867852 1872285 . + . ID=LTnewLM_360058900.1:pep;Derives_from=LTnewLM_360058900.1;orthologous_to=LmjF.36.4730_mRNA;ortholog_cluster=OG0006553;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1873555 1877715 1 + . ID=LTnewLM_360059000 LTnewLM_36 AUGUSTUS mRNA 1873555 1877715 1 + . ID=LTnewLM_360059000.1;Parent=LTnewLM_360059000 LTnewLM_36 AUGUSTUS CDS 1873555 1877715 1 + 0 ID=LTnewLM_360059000.1:CDS:1;Parent=LTnewLM_360059000.1 ### LTnewLM_36 . polypeptide 1873555 1877715 . + . ID=LTnewLM_360059000.1:pep;Derives_from=LTnewLM_360059000.1;orthologous_to=LmjF.36.4740_mRNA;ortholog_cluster=OG0006554;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 1878421 1878899 . + . ID=LTnewLM_360059100:pseudogene;coverage=0.997;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.4750_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1878421 1878899 . + . ID=LTnewLM_360059100.1;Parent=LTnewLM_360059100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1878421 1878899 . + . ID=LTnewLM_360059100.1:pseudogenic_exon:1;Parent=LTnewLM_360059100.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1878421 1878899 . + . ID=LTnewLM_360059100.1:pep;Derives_from=LTnewLM_360059100.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 1879634 1881487 1 + . ID=LTnewLM_360059200 LTnewLM_36 AUGUSTUS mRNA 1879634 1881487 1 + . ID=LTnewLM_360059200.1;Parent=LTnewLM_360059200 LTnewLM_36 AUGUSTUS CDS 1879634 1881487 1 + 0 ID=LTnewLM_360059200.1:CDS:1;Parent=LTnewLM_360059200.1 ### LTnewLM_36 . polypeptide 1879634 1881487 . + . ID=LTnewLM_360059200.1:pep;Derives_from=LTnewLM_360059200.1;orthologous_to=LmjF.36.4760_mRNA;ortholog_cluster=OG0006555;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1882395 1884047 1 + . ID=LTnewLM_360059300 LTnewLM_36 AUGUSTUS mRNA 1882395 1884047 1 + . ID=LTnewLM_360059300.1;Parent=LTnewLM_360059300 LTnewLM_36 AUGUSTUS CDS 1882395 1884047 1 + 0 ID=LTnewLM_360059300.1:CDS:1;Parent=LTnewLM_360059300.1 ### LTnewLM_36 . polypeptide 1882395 1884047 . + . ID=LTnewLM_360059300.1:pep;Derives_from=LTnewLM_360059300.1;orthologous_to=LmjF.36.4770_mRNA;ortholog_cluster=OG0006556;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1884938 1885891 1 + . ID=LTnewLM_360059400 LTnewLM_36 AUGUSTUS mRNA 1884938 1885891 1 + . ID=LTnewLM_360059400.1;Parent=LTnewLM_360059400 LTnewLM_36 AUGUSTUS CDS 1884938 1885891 1 + 0 ID=LTnewLM_360059400.1:CDS:1;Parent=LTnewLM_360059400.1 ### LTnewLM_36 . polypeptide 1884938 1885891 . + . ID=LTnewLM_360059400.1:pep;Derives_from=LTnewLM_360059400.1;orthologous_to=LmjF.36.4780_mRNA;ortholog_cluster=OG0006557;product=term%3DProtein of unknown function (DUF1749)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08538 LTnewLM_36 Pfam protein_match 1885007 1885645 . + . Parent=LTnewLM_360059400.1:pep;Name=PF08538;signature_desc=Protein of unknown function (DUF1749) ### LTnewLM_36 AUGUSTUS gene 1888163 1890943 1 + . ID=LTnewLM_360059500 LTnewLM_36 AUGUSTUS mRNA 1888163 1890943 1 + . ID=LTnewLM_360059500.1;Parent=LTnewLM_360059500 LTnewLM_36 AUGUSTUS CDS 1888163 1890943 1 + 0 ID=LTnewLM_360059500.1:CDS:1;Parent=LTnewLM_360059500.1 ### LTnewLM_36 . polypeptide 1888163 1890943 . + . ID=LTnewLM_360059500.1:pep;Derives_from=LTnewLM_360059500.1;orthologous_to=LmjF.36.4790_mRNA;ortholog_cluster=OG0006558;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1891842 1893377 1 + . ID=LTnewLM_360059600 LTnewLM_36 AUGUSTUS mRNA 1891842 1893377 1 + . ID=LTnewLM_360059600.1;Parent=LTnewLM_360059600 LTnewLM_36 AUGUSTUS CDS 1891842 1893377 1 + 0 ID=LTnewLM_360059600.1:CDS:1;Parent=LTnewLM_360059600.1 ### LTnewLM_36 . polypeptide 1891842 1893377 . + . ID=LTnewLM_360059600.1:pep;Derives_from=LTnewLM_360059600.1;orthologous_to=LmjF.36.4800_mRNA;ortholog_cluster=OG0006559;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1894379 1895215 1 + . ID=LTnewLM_360059700 LTnewLM_36 AUGUSTUS mRNA 1894379 1895215 1 + . ID=LTnewLM_360059700.1;Parent=LTnewLM_360059700 LTnewLM_36 AUGUSTUS CDS 1894379 1895215 1 + 0 ID=LTnewLM_360059700.1:CDS:1;Parent=LTnewLM_360059700.1 ### LTnewLM_36 . polypeptide 1894379 1895215 . + . ID=LTnewLM_360059700.1:pep;Derives_from=LTnewLM_360059700.1;orthologous_to=LmjF.36.4810_mRNA;ortholog_cluster=OG0006560;product=term%3DPentacotripeptide-repeat region of PRORP/PPR repeat/Pentatricopeptide repeat domain/PPR repeat family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17177|Pfam:PF01535|Pfam:PF13812|Pfam:PF13041|Pfam:PF12854 LTnewLM_36 Pfam protein_match 1894427 1894864 . + . Parent=LTnewLM_360059700.1:pep;Name=PF17177;signature_desc=Pentacotripeptide-repeat region of PRORP LTnewLM_36 Pfam protein_match 1894439 1894504 . + . Parent=LTnewLM_360059700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_36 Pfam protein_match 1894514 1894639 . + . Parent=LTnewLM_360059700.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_36 Pfam protein_match 1894520 1894666 . + . Parent=LTnewLM_360059700.1:pep;Name=PF13041;signature_desc=PPR repeat family LTnewLM_36 Pfam protein_match 1894532 1894612 . + . Parent=LTnewLM_360059700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_36 Pfam protein_match 1894598 1894765 . + . Parent=LTnewLM_360059700.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_36 Pfam protein_match 1894619 1894711 . + . Parent=LTnewLM_360059700.1:pep;Name=PF12854;signature_desc=PPR repeat LTnewLM_36 Pfam protein_match 1894634 1894711 . + . Parent=LTnewLM_360059700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_36 Pfam protein_match 1894730 1894867 . + . Parent=LTnewLM_360059700.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_36 Pfam protein_match 1894742 1894816 . + . Parent=LTnewLM_360059700.1:pep;Name=PF01535;signature_desc=PPR repeat LTnewLM_36 Pfam protein_match 1894937 1895050 . + . Parent=LTnewLM_360059700.1:pep;Name=PF13812;signature_desc=Pentatricopeptide repeat domain LTnewLM_36 Pfam protein_match 1894955 1895041 . + . Parent=LTnewLM_360059700.1:pep;Name=PF01535;signature_desc=PPR repeat ### LTnewLM_36 AUGUSTUS gene 1895985 1897514 1 + . ID=LTnewLM_360059800 LTnewLM_36 AUGUSTUS mRNA 1895985 1897514 1 + . ID=LTnewLM_360059800.1;Parent=LTnewLM_360059800 LTnewLM_36 AUGUSTUS CDS 1895985 1897514 1 + 0 ID=LTnewLM_360059800.1:CDS:1;Parent=LTnewLM_360059800.1 ### LTnewLM_36 . polypeptide 1895985 1897514 . + . ID=LTnewLM_360059800.1:pep;Derives_from=LTnewLM_360059800.1;orthologous_to=LmjF.36.4820_mRNA;ortholog_cluster=OG0006561;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1896519 1896623 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1896648 1896749 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1896768 1896875 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1896897 1897001 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1897014 1897124 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1897404 1897496 . + . Parent=LTnewLM_360059800.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_36 Liftoff gene 1898141 1899621 . + . ID=LTnewLM_360059900;coverage=0.999;sequence_ID=0.929;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.4830_0 LTnewLM_36 Liftoff mRNA 1898141 1899621 . + . ID=LTnewLM_360059900.1;Parent=LTnewLM_360059900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 1898141 1898202 . + . ID=LTnewLM_360059900:five_prime_UTR;Parent=LTnewLM_360059900.1;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1898203 1899621 . + 0 ID=LTnewLM_360059900.1:CDS:1;Parent=LTnewLM_360059900.1;extra_copy_number=0 LTnewLM_36 Liftoff mRNA 1898223 1899621 . + . ID=LTnewLM_360059900.2;Parent=LTnewLM_360059900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 1898223 1898502 . + . ID=LTnewLM_360059900:five_prime_UTR.1;Parent=LTnewLM_360059900.2;extra_copy_number=0 LTnewLM_36 Liftoff CDS 1898503 1899621 . + 0 ID=LTnewLM_360059900.2:CDS:1;Parent=LTnewLM_360059900.2;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1898203 1899621 . + . ID=LTnewLM_360059900.1:pep;Derives_from=LTnewLM_360059900.1;orthologous_to=LTnewLM_360059900.2,LmjF.36.4830.1_mRNA,LmjF.36.4830.2_mRNA;ortholog_cluster=OG0000262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 1898503 1899621 . + . ID=LTnewLM_360059900.2:pep;Derives_from=LTnewLM_360059900.2;orthologous_to=LTnewLM_360059900.1,LmjF.36.4830.1_mRNA,LmjF.36.4830.2_mRNA;ortholog_cluster=OG0000262;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1902382 1906008 1 + . ID=LTnewLM_360060000 LTnewLM_36 AUGUSTUS mRNA 1902382 1906008 1 + . ID=LTnewLM_360060000.1;Parent=LTnewLM_360060000 LTnewLM_36 AUGUSTUS CDS 1902382 1906008 1 + 0 ID=LTnewLM_360060000.1:CDS:1;Parent=LTnewLM_360060000.1 ### LTnewLM_36 . polypeptide 1902382 1906008 . + . ID=LTnewLM_360060000.1:pep;Derives_from=LTnewLM_360060000.1;orthologous_to=LmjF.36.4840_mRNA;ortholog_cluster=OG0006562;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_36 Pfam protein_match 1904104 1904157 . + . Parent=LTnewLM_360060000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_36 Pfam protein_match 1904254 1904310 . + . Parent=LTnewLM_360060000.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_36 AUGUSTUS gene 1908831 1910663 1 + . ID=LTnewLM_360060100 LTnewLM_36 AUGUSTUS mRNA 1908831 1910663 1 + . ID=LTnewLM_360060100.1;Parent=LTnewLM_360060100 LTnewLM_36 AUGUSTUS CDS 1908831 1910663 1 + 0 ID=LTnewLM_360060100.1:CDS:1;Parent=LTnewLM_360060100.1 ### LTnewLM_36 . polypeptide 1908831 1910663 . + . ID=LTnewLM_360060100.1:pep;Derives_from=LTnewLM_360060100.1;orthologous_to=LmjF.36.4850_mRNA;ortholog_cluster=OG0006563;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1913989 1914696 1 + . ID=LTnewLM_360060200 LTnewLM_36 AUGUSTUS mRNA 1913989 1914696 1 + . ID=LTnewLM_360060200.1;Parent=LTnewLM_360060200 LTnewLM_36 AUGUSTUS CDS 1913989 1914696 1 + 0 ID=LTnewLM_360060200.1:CDS:1;Parent=LTnewLM_360060200.1 ### LTnewLM_36 . polypeptide 1913989 1914696 . + . ID=LTnewLM_360060200.1:pep;Derives_from=LTnewLM_360060200.1;orthologous_to=LmjF.36.4860_mRNA;ortholog_cluster=OG0006564;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1916052 1916771 1 + . ID=LTnewLM_360060300 LTnewLM_36 AUGUSTUS mRNA 1916052 1916771 1 + . ID=LTnewLM_360060300.1;Parent=LTnewLM_360060300 LTnewLM_36 AUGUSTUS CDS 1916052 1916771 1 + 0 ID=LTnewLM_360060300.1:CDS:1;Parent=LTnewLM_360060300.1 ### LTnewLM_36 . polypeptide 1916052 1916771 . + . ID=LTnewLM_360060300.1:pep;Derives_from=LTnewLM_360060300.1;orthologous_to=LmjF.36.4870_mRNA,LmjF.36.4880_mRNA;ortholog_cluster=OG0000482;product=term%3DSugar efflux transporter for intercellular exchange%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03083 LTnewLM_36 Pfam protein_match 1916070 1916315 . + . Parent=LTnewLM_360060300.1:pep;Name=PF03083;signature_desc=Sugar efflux transporter for intercellular exchange LTnewLM_36 Pfam protein_match 1916472 1916711 . + . Parent=LTnewLM_360060300.1:pep;Name=PF03083;signature_desc=Sugar efflux transporter for intercellular exchange ### LTnewLM_36 AUGUSTUS gene 1918210 1919151 1 - . ID=LTnewLM_360060400 LTnewLM_36 AUGUSTUS mRNA 1918210 1919151 1 - . ID=LTnewLM_360060400.1;Parent=LTnewLM_360060400 LTnewLM_36 AUGUSTUS CDS 1918210 1919151 1 - 0 ID=LTnewLM_360060400.1:CDS:1;Parent=LTnewLM_360060400.1 ### LTnewLM_36 . polypeptide 1918210 1919151 . - . ID=LTnewLM_360060400.1:pep;Derives_from=LTnewLM_360060400.1;orthologous_to=LmjF.36.4890_mRNA;ortholog_cluster=OG0006565;product=term%3DLeucine rich repeat/Leucine-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855|Pfam:PF14580;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1918696 1918926 . - . Parent=LTnewLM_360060400.1:pep;Name=PF14580;signature_desc=Leucine-rich repeat LTnewLM_36 Pfam protein_match 1918816 1918971 . - . Parent=LTnewLM_360060400.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1919773 1920438 1 - . ID=LTnewLM_360060500 LTnewLM_36 AUGUSTUS mRNA 1919773 1920438 1 - . ID=LTnewLM_360060500.1;Parent=LTnewLM_360060500 LTnewLM_36 AUGUSTUS CDS 1919773 1920438 1 - 0 ID=LTnewLM_360060500.1:CDS:1;Parent=LTnewLM_360060500.1 ### LTnewLM_36 . polypeptide 1919773 1920438 . - . ID=LTnewLM_360060500.1:pep;Derives_from=LTnewLM_360060500.1;orthologous_to=LmjF.36.4895_mRNA;ortholog_cluster=OG0006566;product=term%3D3' exoribonuclease family%2C domain 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01138 LTnewLM_36 Pfam protein_match 1920046 1920402 . - . Parent=LTnewLM_360060500.1:pep;Name=PF01138;signature_desc=3' exoribonuclease family%2C domain 1 ### LTnewLM_36 AUGUSTUS gene 1920877 1927242 1 - . ID=LTnewLM_360060600 LTnewLM_36 AUGUSTUS mRNA 1920877 1927242 1 - . ID=LTnewLM_360060600.1;Parent=LTnewLM_360060600 LTnewLM_36 AUGUSTUS CDS 1920877 1927242 1 - 0 ID=LTnewLM_360060600.1:CDS:1;Parent=LTnewLM_360060600.1 ### LTnewLM_36 . polypeptide 1920877 1927242 . - . ID=LTnewLM_360060600.1:pep;Derives_from=LTnewLM_360060600.1;orthologous_to=LmjF.36.4900_mRNA;ortholog_cluster=OG0006567;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1928948 1930030 1 - . ID=LTnewLM_360060700 LTnewLM_36 AUGUSTUS mRNA 1928948 1930030 1 - . ID=LTnewLM_360060700.1;Parent=LTnewLM_360060700 LTnewLM_36 AUGUSTUS CDS 1928948 1930030 1 - 0 ID=LTnewLM_360060700.1:CDS:1;Parent=LTnewLM_360060700.1 ### LTnewLM_36 . polypeptide 1928948 1930030 . - . ID=LTnewLM_360060700.1:pep;Derives_from=LTnewLM_360060700.1;orthologous_to=LmjF.36.4910_mRNA;ortholog_cluster=OG0006568;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1935047 1937137 1 - . ID=LTnewLM_360060800 LTnewLM_36 AUGUSTUS mRNA 1935047 1937137 1 - . ID=LTnewLM_360060800.1;Parent=LTnewLM_360060800 LTnewLM_36 AUGUSTUS CDS 1935047 1937137 1 - 0 ID=LTnewLM_360060800.1:CDS:1;Parent=LTnewLM_360060800.1 ### LTnewLM_36 . polypeptide 1935047 1937137 . - . ID=LTnewLM_360060800.1:pep;Derives_from=LTnewLM_360060800.1;orthologous_to=LmjF.36.4920_mRNA;ortholog_cluster=OG0006569;product=term%3DCalponin homology (CH) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00307;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 1936217 1936546 . - . Parent=LTnewLM_360060800.1:pep;Name=PF00307;signature_desc=Calponin homology (CH) domain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 1938998 1940125 1 - . ID=LTnewLM_360060900 LTnewLM_36 AUGUSTUS mRNA 1938998 1940125 1 - . ID=LTnewLM_360060900.1;Parent=LTnewLM_360060900 LTnewLM_36 AUGUSTUS CDS 1938998 1940125 1 - 0 ID=LTnewLM_360060900.1:CDS:1;Parent=LTnewLM_360060900.1 ### LTnewLM_36 . polypeptide 1938998 1940125 . - . ID=LTnewLM_360060900.1:pep;Derives_from=LTnewLM_360060900.1;orthologous_to=LmjF.36.4930_mRNA;ortholog_cluster=OG0006570;product=term%3DInitiation factor 2 subunit family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01008;Ontology_term=GO:0044237 LTnewLM_36 Pfam protein_match 1939052 1939972 . - . Parent=LTnewLM_360060900.1:pep;Name=PF01008;signature_desc=Initiation factor 2 subunit family;Ontology_term=GO:0044237 ### LTnewLM_36 AUGUSTUS gene 1942268 1943095 1 - . ID=LTnewLM_360061000 LTnewLM_36 AUGUSTUS mRNA 1942268 1943095 1 - . ID=LTnewLM_360061000.1;Parent=LTnewLM_360061000 LTnewLM_36 AUGUSTUS CDS 1942268 1943095 1 - 0 ID=LTnewLM_360061000.1:CDS:1;Parent=LTnewLM_360061000.1 ### LTnewLM_36 . polypeptide 1942268 1943095 . - . ID=LTnewLM_360061000.1:pep;Derives_from=LTnewLM_360061000.1;orthologous_to=LmjF.36.4940_mRNA;ortholog_cluster=OG0006571;product=term%3DUncharacterized protein family UPF0029%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01205 LTnewLM_36 Pfam protein_match 1942337 1942654 . - . Parent=LTnewLM_360061000.1:pep;Name=PF01205;signature_desc=Uncharacterized protein family UPF0029 ### LTnewLM_36 AUGUSTUS gene 1943710 1945857 1 - . ID=LTnewLM_360061100 LTnewLM_36 AUGUSTUS mRNA 1943710 1945857 1 - . ID=LTnewLM_360061100.1;Parent=LTnewLM_360061100 LTnewLM_36 AUGUSTUS CDS 1943710 1945857 1 - 0 ID=LTnewLM_360061100.1:CDS:1;Parent=LTnewLM_360061100.1 ### LTnewLM_36 . polypeptide 1943710 1945857 . - . ID=LTnewLM_360061100.1:pep;Derives_from=LTnewLM_360061100.1;orthologous_to=LmjF.36.4950_mRNA;ortholog_cluster=OG0006572;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1946980 1949910 1 - . ID=LTnewLM_360061200 LTnewLM_36 AUGUSTUS mRNA 1946980 1949910 1 - . ID=LTnewLM_360061200.1;Parent=LTnewLM_360061200 LTnewLM_36 AUGUSTUS CDS 1946980 1949910 1 - 0 ID=LTnewLM_360061200.1:CDS:1;Parent=LTnewLM_360061200.1 ### LTnewLM_36 . polypeptide 1946980 1949910 . - . ID=LTnewLM_360061200.1:pep;Derives_from=LTnewLM_360061200.1;orthologous_to=LmjF.36.4960_mRNA;ortholog_cluster=OG0006573;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1953341 1954381 1 - . ID=LTnewLM_360061300 LTnewLM_36 AUGUSTUS mRNA 1953341 1954381 1 - . ID=LTnewLM_360061300.1;Parent=LTnewLM_360061300 LTnewLM_36 AUGUSTUS CDS 1953341 1954381 1 - 0 ID=LTnewLM_360061300.1:CDS:1;Parent=LTnewLM_360061300.1 ### LTnewLM_36 . polypeptide 1953341 1954381 . - . ID=LTnewLM_360061300.1:pep;Derives_from=LTnewLM_360061300.1;orthologous_to=LmjF.36.4970_mRNA;ortholog_cluster=OG0006574;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1958826 1959071 1 - . ID=LTnewLM_360061400 LTnewLM_36 AUGUSTUS mRNA 1958826 1959071 1 - . ID=LTnewLM_360061400.1;Parent=LTnewLM_360061400 LTnewLM_36 AUGUSTUS CDS 1958826 1959071 1 - 0 ID=LTnewLM_360061400.1:CDS:1;Parent=LTnewLM_360061400.1 ### LTnewLM_36 . polypeptide 1958826 1959071 . - . ID=LTnewLM_360061400.1:pep;Derives_from=LTnewLM_360061400.1;orthologous_to=LTnewLM_100019100.1,LTnewLM_310022100.1,LTnewLM_310022300.1,LTnewLM_310022500.1,LTnewLM_310027800.1;ortholog_cluster=OG0000052;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1963187 1964182 1 - . ID=LTnewLM_360061500 LTnewLM_36 AUGUSTUS mRNA 1963187 1964182 1 - . ID=LTnewLM_360061500.1;Parent=LTnewLM_360061500 LTnewLM_36 AUGUSTUS CDS 1963187 1964182 1 - 0 ID=LTnewLM_360061500.1:CDS:1;Parent=LTnewLM_360061500.1 ### LTnewLM_36 . polypeptide 1963187 1964182 . - . ID=LTnewLM_360061500.1:pep;Derives_from=LTnewLM_360061500.1;orthologous_to=LmjF.36.4980_mRNA;ortholog_cluster=OG0006575;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1965786 1967474 1 - . ID=LTnewLM_360061600 LTnewLM_36 AUGUSTUS mRNA 1965786 1967474 1 - . ID=LTnewLM_360061600.1;Parent=LTnewLM_360061600 LTnewLM_36 AUGUSTUS CDS 1965786 1967474 1 - 0 ID=LTnewLM_360061600.1:CDS:1;Parent=LTnewLM_360061600.1 ### LTnewLM_36 . polypeptide 1965786 1967474 . - . ID=LTnewLM_360061600.1:pep;Derives_from=LTnewLM_360061600.1;orthologous_to=LmjF.36.4990_mRNA;ortholog_cluster=OG0006576;product=term%3DTubulin/FtsZ family%2C GTPase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091;Ontology_term=GO:0003924 LTnewLM_36 Pfam protein_match 1966647 1967465 . - . Parent=LTnewLM_360061600.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 ### LTnewLM_36 AUGUSTUS gene 1969992 1971050 1 - . ID=LTnewLM_360061700 LTnewLM_36 AUGUSTUS mRNA 1969992 1971050 1 - . ID=LTnewLM_360061700.1;Parent=LTnewLM_360061700 LTnewLM_36 AUGUSTUS CDS 1969992 1971050 1 - 0 ID=LTnewLM_360061700.1:CDS:1;Parent=LTnewLM_360061700.1 ### LTnewLM_36 . polypeptide 1969992 1971050 . - . ID=LTnewLM_360061700.1:pep;Derives_from=LTnewLM_360061700.1;orthologous_to=LmjF.36.5000_mRNA;ortholog_cluster=OG0006577;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1973091 1973831 1 - . ID=LTnewLM_360061800 LTnewLM_36 AUGUSTUS mRNA 1973091 1973831 1 - . ID=LTnewLM_360061800.1;Parent=LTnewLM_360061800 LTnewLM_36 AUGUSTUS CDS 1973091 1973831 1 - 0 ID=LTnewLM_360061800.1:CDS:1;Parent=LTnewLM_360061800.1 ### LTnewLM_36 . polypeptide 1973091 1973831 . - . ID=LTnewLM_360061800.1:pep;Derives_from=LTnewLM_360061800.1;orthologous_to=LTnewLM_360062900.1,LmjF.36.5010_mRNA,LmjF.36.5120_mRNA;ortholog_cluster=OG0000263;product=term%3DRibosomal protein S2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00318;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 1973280 1973486 . - . Parent=LTnewLM_360061800.1:pep;Name=PF00318;signature_desc=Ribosomal protein S2;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_36 Pfam protein_match 1973481 1973771 . - . Parent=LTnewLM_360061800.1:pep;Name=PF00318;signature_desc=Ribosomal protein S2;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 1974824 1977361 1 - . ID=LTnewLM_360061900 LTnewLM_36 AUGUSTUS mRNA 1974824 1977361 1 - . ID=LTnewLM_360061900.1;Parent=LTnewLM_360061900 LTnewLM_36 AUGUSTUS CDS 1974824 1977361 1 - 0 ID=LTnewLM_360061900.1:CDS:1;Parent=LTnewLM_360061900.1 ### LTnewLM_36 . polypeptide 1974824 1977361 . - . ID=LTnewLM_360061900.1:pep;Derives_from=LTnewLM_360061900.1;orthologous_to=LmjF.36.5020_mRNA;ortholog_cluster=OG0006578;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1978303 1979469 1 - . ID=LTnewLM_360062000 LTnewLM_36 AUGUSTUS mRNA 1978303 1979469 1 - . ID=LTnewLM_360062000.1;Parent=LTnewLM_360062000 LTnewLM_36 AUGUSTUS CDS 1978303 1979469 1 - 0 ID=LTnewLM_360062000.1:CDS:1;Parent=LTnewLM_360062000.1 ### LTnewLM_36 . polypeptide 1978303 1979469 . - . ID=LTnewLM_360062000.1:pep;Derives_from=LTnewLM_360062000.1;orthologous_to=LmjF.36.5030_mRNA;ortholog_cluster=OG0006579;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1981251 1982546 1 - . ID=LTnewLM_360062100 LTnewLM_36 AUGUSTUS mRNA 1981251 1982546 1 - . ID=LTnewLM_360062100.1;Parent=LTnewLM_360062100 LTnewLM_36 AUGUSTUS CDS 1981251 1982546 1 - 0 ID=LTnewLM_360062100.1:CDS:1;Parent=LTnewLM_360062100.1 ### LTnewLM_36 . polypeptide 1981251 1982546 . - . ID=LTnewLM_360062100.1:pep;Derives_from=LTnewLM_360062100.1;orthologous_to=LmjF.36.5040_mRNA;ortholog_cluster=OG0006580;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1984695 1985498 1 - . ID=LTnewLM_360062200 LTnewLM_36 AUGUSTUS mRNA 1984695 1985498 1 - . ID=LTnewLM_360062200.1;Parent=LTnewLM_360062200 LTnewLM_36 AUGUSTUS CDS 1984695 1985498 1 - 0 ID=LTnewLM_360062200.1:CDS:1;Parent=LTnewLM_360062200.1 ### LTnewLM_36 . polypeptide 1984695 1985498 . - . ID=LTnewLM_360062200.1:pep;Derives_from=LTnewLM_360062200.1;orthologous_to=LmjF.36.5050_mRNA;ortholog_cluster=OG0006581;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1986843 1988165 1 - . ID=LTnewLM_360062300 LTnewLM_36 AUGUSTUS mRNA 1986843 1988165 1 - . ID=LTnewLM_360062300.1;Parent=LTnewLM_360062300 LTnewLM_36 AUGUSTUS CDS 1986843 1988165 1 - 0 ID=LTnewLM_360062300.1:CDS:1;Parent=LTnewLM_360062300.1 ### LTnewLM_36 . polypeptide 1986843 1988165 . - . ID=LTnewLM_360062300.1:pep;Derives_from=LTnewLM_360062300.1;orthologous_to=LmjF.36.5060_mRNA;ortholog_cluster=OG0006582;product=term%3DPIN domain of ribonuclease/Nin one binding (NOB1) Zn-ribbon like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17146|Pfam:PF08772 LTnewLM_36 Pfam protein_match 1987089 1987304 . - . Parent=LTnewLM_360062300.1:pep;Name=PF08772;signature_desc=Nin one binding (NOB1) Zn-ribbon like LTnewLM_36 Pfam protein_match 1987731 1987988 . - . Parent=LTnewLM_360062300.1:pep;Name=PF17146;signature_desc=PIN domain of ribonuclease ### LTnewLM_36 . pseudogene 1989086 1990296 . - . ID=LTnewLM_360062400:pseudogene;coverage=0.999;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5070_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1989086 1990296 . - . ID=LTnewLM_360062400.1;Parent=LTnewLM_360062400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1989086 1990296 . - . ID=LTnewLM_360062400.1:pseudogenic_exon:1;Parent=LTnewLM_360062400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1989086 1990296 . - . ID=LTnewLM_360062400.1:pep;Derives_from=LTnewLM_360062400.1;orthologous_to=LmjF.36.5070_mRNA;ortholog_cluster=OG0007693;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 1991376 1993259 . - . ID=LTnewLM_360062500:pseudogene;coverage=0.996;sequence_ID=0.924;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5080_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 1991376 1993259 . - . ID=LTnewLM_360062500.1;Parent=LTnewLM_360062500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 1991376 1993259 . - . ID=LTnewLM_360062500.1:pseudogenic_exon:1;Parent=LTnewLM_360062500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 1991376 1993259 . - . ID=LTnewLM_360062500.1:pep;Derives_from=LTnewLM_360062500.1;orthologous_to=LmjF.36.5080_mRNA;ortholog_cluster=OG0007694;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 1994797 1995624 1 - . ID=LTnewLM_360062600 LTnewLM_36 AUGUSTUS mRNA 1994797 1995624 1 - . ID=LTnewLM_360062600.1;Parent=LTnewLM_360062600 LTnewLM_36 AUGUSTUS CDS 1994797 1995624 1 - 0 ID=LTnewLM_360062600.1:CDS:1;Parent=LTnewLM_360062600.1 ### LTnewLM_36 . polypeptide 1994797 1995624 . - . ID=LTnewLM_360062600.1:pep;Derives_from=LTnewLM_360062600.1;orthologous_to=LmjF.36.5090_mRNA;ortholog_cluster=OG0006583;product=term%3DCasein kinase II regulatory subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01214;Ontology_term=GO:0019887,GO:0005956 LTnewLM_36 Pfam protein_match 1995010 1995564 . - . Parent=LTnewLM_360062600.1:pep;Name=PF01214;signature_desc=Casein kinase II regulatory subunit;Ontology_term=GO:0019887,GO:0005956 ### LTnewLM_36 AUGUSTUS gene 1998648 2001518 1 - . ID=LTnewLM_360062700 LTnewLM_36 AUGUSTUS mRNA 1998648 2001518 1 - . ID=LTnewLM_360062700.1;Parent=LTnewLM_360062700 LTnewLM_36 AUGUSTUS CDS 1998648 2001518 1 - 0 ID=LTnewLM_360062700.1:CDS:1;Parent=LTnewLM_360062700.1 ### LTnewLM_36 . polypeptide 1998648 2001518 . - . ID=LTnewLM_360062700.1:pep;Derives_from=LTnewLM_360062700.1;orthologous_to=LmjF.36.5100_mRNA;ortholog_cluster=OG0006584;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2002645 2003439 1 - . ID=LTnewLM_360062800 LTnewLM_36 AUGUSTUS mRNA 2002645 2003439 1 - . ID=LTnewLM_360062800.1;Parent=LTnewLM_360062800 LTnewLM_36 AUGUSTUS CDS 2002645 2003439 1 - 0 ID=LTnewLM_360062800.1:CDS:1;Parent=LTnewLM_360062800.1 ### LTnewLM_36 . polypeptide 2002645 2003439 . - . ID=LTnewLM_360062800.1:pep;Derives_from=LTnewLM_360062800.1;orthologous_to=LmjF.36.5110_mRNA;ortholog_cluster=OG0006585;product=term%3DCCDC81 eukaryotic HU domain 1/CCDC81 eukaryotic HU domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14908|Pfam:PF18289 LTnewLM_36 Pfam protein_match 2002858 2003073 . - . Parent=LTnewLM_360062800.1:pep;Name=PF18289;signature_desc=CCDC81 eukaryotic HU domain 2 LTnewLM_36 Pfam protein_match 2003119 2003373 . - . Parent=LTnewLM_360062800.1:pep;Name=PF14908;signature_desc=CCDC81 eukaryotic HU domain 1 ### LTnewLM_36 AUGUSTUS gene 2004475 2005215 1 - . ID=LTnewLM_360062900 LTnewLM_36 AUGUSTUS mRNA 2004475 2005215 1 - . ID=LTnewLM_360062900.1;Parent=LTnewLM_360062900 LTnewLM_36 AUGUSTUS CDS 2004475 2005215 1 - 0 ID=LTnewLM_360062900.1:CDS:1;Parent=LTnewLM_360062900.1 ### LTnewLM_36 . polypeptide 2004475 2005215 . - . ID=LTnewLM_360062900.1:pep;Derives_from=LTnewLM_360062900.1;orthologous_to=LTnewLM_360061800.1,LmjF.36.5010_mRNA,LmjF.36.5120_mRNA;ortholog_cluster=OG0000263;product=term%3DRibosomal protein S2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00318;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_36 Pfam protein_match 2004664 2004870 . - . Parent=LTnewLM_360062900.1:pep;Name=PF00318;signature_desc=Ribosomal protein S2;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 LTnewLM_36 Pfam protein_match 2004865 2005155 . - . Parent=LTnewLM_360062900.1:pep;Name=PF00318;signature_desc=Ribosomal protein S2;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_36 AUGUSTUS gene 2007942 2008778 1 - . ID=LTnewLM_360063000 LTnewLM_36 AUGUSTUS mRNA 2007942 2008778 1 - . ID=LTnewLM_360063000.1;Parent=LTnewLM_360063000 LTnewLM_36 AUGUSTUS CDS 2007942 2008778 1 - 0 ID=LTnewLM_360063000.1:CDS:1;Parent=LTnewLM_360063000.1 ### LTnewLM_36 . polypeptide 2007942 2008778 . - . ID=LTnewLM_360063000.1:pep;Derives_from=LTnewLM_360063000.1;orthologous_to=LmjF.36.5130_mRNA;ortholog_cluster=OG0006586;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2012804 2014360 1 - . ID=LTnewLM_360063100 LTnewLM_36 AUGUSTUS mRNA 2012804 2014360 1 - . ID=LTnewLM_360063100.1;Parent=LTnewLM_360063100 LTnewLM_36 AUGUSTUS CDS 2012804 2014360 1 - 0 ID=LTnewLM_360063100.1:CDS:1;Parent=LTnewLM_360063100.1 ### LTnewLM_36 . polypeptide 2012804 2014360 . - . ID=LTnewLM_360063100.1:pep;Derives_from=LTnewLM_360063100.1;orthologous_to=LmjF.36.5140_mRNA;ortholog_cluster=OG0006587;product=term%3DVHS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00790;Ontology_term=GO:0006886 LTnewLM_36 Pfam protein_match 2014013 2014288 . - . Parent=LTnewLM_360063100.1:pep;Name=PF00790;signature_desc=VHS domain;Ontology_term=GO:0006886 ### LTnewLM_36 AUGUSTUS gene 2016992 2018869 1 - . ID=LTnewLM_360063200 LTnewLM_36 AUGUSTUS mRNA 2016992 2018869 1 - . ID=LTnewLM_360063200.1;Parent=LTnewLM_360063200 LTnewLM_36 AUGUSTUS CDS 2016992 2018869 1 - 0 ID=LTnewLM_360063200.1:CDS:1;Parent=LTnewLM_360063200.1 ### LTnewLM_36 . polypeptide 2016992 2018869 . - . ID=LTnewLM_360063200.1:pep;Derives_from=LTnewLM_360063200.1;orthologous_to=LmjF.36.5150_mRNA;ortholog_cluster=OG0006588;product=term%3DKinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_36 Pfam protein_match 2018192 2018608 . - . Parent=LTnewLM_360063200.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_36 AUGUSTUS gene 2019663 2021360 1 - . ID=LTnewLM_360063300 LTnewLM_36 AUGUSTUS mRNA 2019663 2021360 1 - . ID=LTnewLM_360063300.1;Parent=LTnewLM_360063300 LTnewLM_36 AUGUSTUS CDS 2019663 2021360 1 - 0 ID=LTnewLM_360063300.1:CDS:1;Parent=LTnewLM_360063300.1 ### LTnewLM_36 . polypeptide 2019663 2021360 . - . ID=LTnewLM_360063300.1:pep;Derives_from=LTnewLM_360063300.1;orthologous_to=LmjF.36.5160_mRNA;ortholog_cluster=OG0006589;product=term%3DMA3 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02847 LTnewLM_36 Pfam protein_match 2019984 2020286 . - . Parent=LTnewLM_360063300.1:pep;Name=PF02847;signature_desc=MA3 domain ### LTnewLM_36 AUGUSTUS gene 2022565 2023194 1 - . ID=LTnewLM_360063400 LTnewLM_36 AUGUSTUS mRNA 2022565 2023194 1 - . ID=LTnewLM_360063400.1;Parent=LTnewLM_360063400 LTnewLM_36 AUGUSTUS CDS 2022565 2023194 1 - 0 ID=LTnewLM_360063400.1:CDS:1;Parent=LTnewLM_360063400.1 ### LTnewLM_36 . polypeptide 2022565 2023194 . - . ID=LTnewLM_360063400.1:pep;Derives_from=LTnewLM_360063400.1;orthologous_to=LmjF.36.5170_mRNA;ortholog_cluster=OG0006590;product=term%3DVPS28 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03997 LTnewLM_36 Pfam protein_match 2022601 2023146 . - . Parent=LTnewLM_360063400.1:pep;Name=PF03997;signature_desc=VPS28 protein ### LTnewLM_36 AUGUSTUS gene 2024922 2026520 1 - . ID=LTnewLM_360063500 LTnewLM_36 AUGUSTUS mRNA 2024922 2026520 1 - . ID=LTnewLM_360063500.1;Parent=LTnewLM_360063500 LTnewLM_36 AUGUSTUS CDS 2024922 2026520 1 - 0 ID=LTnewLM_360063500.1:CDS:1;Parent=LTnewLM_360063500.1 ### LTnewLM_36 . polypeptide 2024922 2026520 . - . ID=LTnewLM_360063500.1:pep;Derives_from=LTnewLM_360063500.1;orthologous_to=LmjF.36.5180_mRNA;ortholog_cluster=OG0006591;product=term%3DAldehyde dehydrogenase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00171;Ontology_term=GO:0055114,GO:0016491,GO:0008152 LTnewLM_36 Pfam protein_match 2025132 2026511 . - . Parent=LTnewLM_360063500.1:pep;Name=PF00171;signature_desc=Aldehyde dehydrogenase family;Ontology_term=GO:0016491,GO:0008152,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 2027321 2031178 1 - . ID=LTnewLM_360063600 LTnewLM_36 AUGUSTUS mRNA 2027321 2031178 1 - . ID=LTnewLM_360063600.1;Parent=LTnewLM_360063600 LTnewLM_36 AUGUSTUS CDS 2027321 2031178 1 - 0 ID=LTnewLM_360063600.1:CDS:1;Parent=LTnewLM_360063600.1 ### LTnewLM_36 . polypeptide 2027321 2031178 . - . ID=LTnewLM_360063600.1:pep;Derives_from=LTnewLM_360063600.1;orthologous_to=LmjF.36.5190_mRNA;ortholog_cluster=OG0006592;product=term%3DType III restriction enzyme%2C res subunit/SNF2-related domain/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04851|Pfam:PF00176|Pfam:PF00271;Ontology_term=GO:0005524,GO:0016787,GO:0003677 LTnewLM_36 Pfam protein_match 2028236 2028571 . - . Parent=LTnewLM_360063600.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 2029514 2030380 . - . Parent=LTnewLM_360063600.1:pep;Name=PF00176;signature_desc=SNF2-related domain;Ontology_term=GO:0003677,GO:0005524 LTnewLM_36 Pfam protein_match 2029913 2030389 . - . Parent=LTnewLM_360063600.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 ### LTnewLM_36 . pseudogene 2031888 2034953 . - . ID=LTnewLM_360063700:pseudogene;coverage=0.999;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5200_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2031888 2034953 . - . ID=LTnewLM_360063700.1;Parent=LTnewLM_360063700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2031888 2034953 . - . ID=LTnewLM_360063700.1:pseudogenic_exon:1;Parent=LTnewLM_360063700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2031888 2034953 . - . ID=LTnewLM_360063700.1:pep;Derives_from=LTnewLM_360063700.1;orthologous_to=LmjF.36.5200_mRNA;ortholog_cluster=OG0007695;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2035703 2040310 0.97 - . ID=LTnewLM_360063800 LTnewLM_36 AUGUSTUS mRNA 2035703 2040310 0.97 - . ID=LTnewLM_360063800.1;Parent=LTnewLM_360063800 LTnewLM_36 AUGUSTUS CDS 2035703 2040310 0.97 - 0 ID=LTnewLM_360063800.1:CDS:1;Parent=LTnewLM_360063800.1 ### LTnewLM_36 . polypeptide 2035703 2040310 . - . ID=LTnewLM_360063800.1:pep;Derives_from=LTnewLM_360063800.1;orthologous_to=LmjF.36.5210_mRNA;ortholog_cluster=OG0006593;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2041477 2042214 1 - . ID=LTnewLM_360063900 LTnewLM_36 AUGUSTUS mRNA 2041477 2042214 1 - . ID=LTnewLM_360063900.1;Parent=LTnewLM_360063900 LTnewLM_36 AUGUSTUS CDS 2041477 2042214 1 - 0 ID=LTnewLM_360063900.1:CDS:1;Parent=LTnewLM_360063900.1 ### LTnewLM_36 . polypeptide 2041477 2042214 . - . ID=LTnewLM_360063900.1:pep;Derives_from=LTnewLM_360063900.1;orthologous_to=LmjF.36.5220_mRNA;ortholog_cluster=OG0006594;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2043322 2044785 1 - . ID=LTnewLM_360064000 LTnewLM_36 AUGUSTUS mRNA 2043322 2044785 1 - . ID=LTnewLM_360064000.1;Parent=LTnewLM_360064000 LTnewLM_36 AUGUSTUS CDS 2043322 2044785 1 - 0 ID=LTnewLM_360064000.1:CDS:1;Parent=LTnewLM_360064000.1 ### LTnewLM_36 . polypeptide 2043322 2044785 . - . ID=LTnewLM_360064000.1:pep;Derives_from=LTnewLM_360064000.1;orthologous_to=LmjF.36.5230_mRNA;ortholog_cluster=OG0006595;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2046643 2050107 1 - . ID=LTnewLM_360064100 LTnewLM_36 AUGUSTUS mRNA 2046643 2050107 1 - . ID=LTnewLM_360064100.1;Parent=LTnewLM_360064100 LTnewLM_36 AUGUSTUS CDS 2046643 2050107 1 - 0 ID=LTnewLM_360064100.1:CDS:1;Parent=LTnewLM_360064100.1 ### LTnewLM_36 . polypeptide 2046643 2050107 . - . ID=LTnewLM_360064100.1:pep;Derives_from=LTnewLM_360064100.1;orthologous_to=LmjF.36.5240_mRNA;ortholog_cluster=OG0006596;product=term%3DGlycosyl hydrolase family 65%2C N-terminal domain/Glycosyl hydrolase family 65 central catalytic domain/Glycosyl hydrolase family 65%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03636|Pfam:PF03632|Pfam:PF03633;Ontology_term=GO:0003824,GO:0005975 LTnewLM_36 Pfam protein_match 2047516 2047623 . - . Parent=LTnewLM_360064100.1:pep;Name=PF03633;signature_desc=Glycosyl hydrolase family 65%2C C-terminal domain LTnewLM_36 Pfam protein_match 2047639 2048760 . - . Parent=LTnewLM_360064100.1:pep;Name=PF03632;signature_desc=Glycosyl hydrolase family 65 central catalytic domain;Ontology_term=GO:0003824,GO:0005975 LTnewLM_36 Pfam protein_match 2049214 2049981 . - . Parent=LTnewLM_360064100.1:pep;Name=PF03636;signature_desc=Glycosyl hydrolase family 65%2C N-terminal domain;Ontology_term=GO:0003824,GO:0005975 ### LTnewLM_36 . pseudogene 2051219 2064602 . - . ID=LTnewLM_360064200:pseudogene;coverage=0.998;sequence_ID=0.742;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5250_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2051219 2064602 . - . ID=LTnewLM_360064200.1;Parent=LTnewLM_360064200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2051219 2064602 . - . ID=LTnewLM_360064200.1:pseudogenic_exon:1;Parent=LTnewLM_360064200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2051219 2064602 . - . ID=LTnewLM_360064200.1:pep;Derives_from=LTnewLM_360064200.1;orthologous_to=LmjF.36.5250_mRNA;ortholog_cluster=OG0007696;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2067520 2070057 1 - . ID=LTnewLM_360064300 LTnewLM_36 AUGUSTUS mRNA 2067520 2070057 1 - . ID=LTnewLM_360064300.1;Parent=LTnewLM_360064300 LTnewLM_36 AUGUSTUS CDS 2067520 2070057 1 - 0 ID=LTnewLM_360064300.1:CDS:1;Parent=LTnewLM_360064300.1 ### LTnewLM_36 . polypeptide 2067520 2070057 . - . ID=LTnewLM_360064300.1:pep;Derives_from=LTnewLM_360064300.1;orthologous_to=LmjF.36.5260_mRNA;ortholog_cluster=OG0006597;product=term%3DAdaptin N terminal region/non-SMC mitotic condensation complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF12717;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_36 Pfam protein_match 2068180 2069913 . - . Parent=LTnewLM_360064300.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_36 Pfam protein_match 2069287 2069655 . - . Parent=LTnewLM_360064300.1:pep;Name=PF12717;signature_desc=non-SMC mitotic condensation complex subunit 1 ### LTnewLM_36 AUGUSTUS gene 2071444 2073642 1 - . ID=LTnewLM_360064400 LTnewLM_36 AUGUSTUS mRNA 2071444 2073642 1 - . ID=LTnewLM_360064400.1;Parent=LTnewLM_360064400 LTnewLM_36 AUGUSTUS CDS 2071444 2073642 1 - 0 ID=LTnewLM_360064400.1:CDS:1;Parent=LTnewLM_360064400.1 ### LTnewLM_36 . polypeptide 2071444 2073642 . - . ID=LTnewLM_360064400.1:pep;Derives_from=LTnewLM_360064400.1;orthologous_to=LmjF.36.5270_mRNA;ortholog_cluster=OG0006598;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_36 Pfam protein_match 2072131 2073630 . - . Parent=LTnewLM_360064400.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_36 AUGUSTUS gene 2074452 2077607 1 - . ID=LTnewLM_360064500 LTnewLM_36 AUGUSTUS mRNA 2074452 2077607 1 - . ID=LTnewLM_360064500.1;Parent=LTnewLM_360064500 LTnewLM_36 AUGUSTUS CDS 2074452 2077607 1 - 0 ID=LTnewLM_360064500.1:CDS:1;Parent=LTnewLM_360064500.1 ### LTnewLM_36 . polypeptide 2074452 2077607 . - . ID=LTnewLM_360064500.1:pep;Derives_from=LTnewLM_360064500.1;orthologous_to=LmjF.36.5280_mRNA;ortholog_cluster=OG0006599;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2079193 2079780 1 - . ID=LTnewLM_360064600 LTnewLM_36 AUGUSTUS mRNA 2079193 2079780 1 - . ID=LTnewLM_360064600.1;Parent=LTnewLM_360064600 LTnewLM_36 AUGUSTUS CDS 2079193 2079780 1 - 0 ID=LTnewLM_360064600.1:CDS:1;Parent=LTnewLM_360064600.1 ### LTnewLM_36 . polypeptide 2079193 2079780 . - . ID=LTnewLM_360064600.1:pep;Derives_from=LTnewLM_360064600.1;orthologous_to=LmjF.36.5290_mRNA;ortholog_cluster=OG0006600;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2081805 2082068 1 - . ID=LTnewLM_360064700 LTnewLM_36 AUGUSTUS mRNA 2081805 2082068 1 - . ID=LTnewLM_360064700.1;Parent=LTnewLM_360064700 LTnewLM_36 AUGUSTUS CDS 2081805 2082068 1 - 0 ID=LTnewLM_360064700.1:CDS:1;Parent=LTnewLM_360064700.1 ### LTnewLM_36 . polypeptide 2081805 2082068 . - . ID=LTnewLM_360064700.1:pep;Derives_from=LTnewLM_360064700.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2082963 2087090 1 - . ID=LTnewLM_360064800 LTnewLM_36 AUGUSTUS mRNA 2082963 2087090 1 - . ID=LTnewLM_360064800.1;Parent=LTnewLM_360064800 LTnewLM_36 AUGUSTUS CDS 2082963 2087090 1 - 0 ID=LTnewLM_360064800.1:CDS:1;Parent=LTnewLM_360064800.1 ### LTnewLM_36 . polypeptide 2082963 2087090 . - . ID=LTnewLM_360064800.1:pep;Derives_from=LTnewLM_360064800.1;orthologous_to=LmjF.36.5300_mRNA;ortholog_cluster=OG0006601;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2088546 2089661 1 - . ID=LTnewLM_360064900 LTnewLM_36 AUGUSTUS mRNA 2088546 2089661 1 - . ID=LTnewLM_360064900.1;Parent=LTnewLM_360064900 LTnewLM_36 AUGUSTUS CDS 2088546 2089661 1 - 0 ID=LTnewLM_360064900.1:CDS:1;Parent=LTnewLM_360064900.1 ### LTnewLM_36 . polypeptide 2088546 2089661 . - . ID=LTnewLM_360064900.1:pep;Derives_from=LTnewLM_360064900.1;orthologous_to=LmjF.36.5310_mRNA;ortholog_cluster=OG0006602;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2090495 2092435 1 - . ID=LTnewLM_360065000 LTnewLM_36 AUGUSTUS mRNA 2090495 2092435 1 - . ID=LTnewLM_360065000.1;Parent=LTnewLM_360065000 LTnewLM_36 AUGUSTUS CDS 2090495 2092435 1 - 0 ID=LTnewLM_360065000.1:CDS:1;Parent=LTnewLM_360065000.1 ### LTnewLM_36 . polypeptide 2090495 2092435 . - . ID=LTnewLM_360065000.1:pep;Derives_from=LTnewLM_360065000.1;orthologous_to=LmjF.36.5320_mRNA;ortholog_cluster=OG0006603;product=term%3DGlutathione S-transferase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13410 LTnewLM_36 Pfam protein_match 2091602 2091802 . - . Parent=LTnewLM_360065000.1:pep;Name=PF13410;signature_desc=Glutathione S-transferase%2C C-terminal domain ### LTnewLM_36 AUGUSTUS gene 2094005 2097226 1 - . ID=LTnewLM_360065100 LTnewLM_36 AUGUSTUS mRNA 2094005 2097226 1 - . ID=LTnewLM_360065100.1;Parent=LTnewLM_360065100 LTnewLM_36 AUGUSTUS CDS 2094005 2097226 1 - 0 ID=LTnewLM_360065100.1:CDS:1;Parent=LTnewLM_360065100.1 ### LTnewLM_36 . polypeptide 2094005 2097226 . - . ID=LTnewLM_360065100.1:pep;Derives_from=LTnewLM_360065100.1;orthologous_to=LmjF.36.5330_mRNA;ortholog_cluster=OG0006604;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2099335 2101926 1 - . ID=LTnewLM_360065200 LTnewLM_36 AUGUSTUS mRNA 2099335 2101926 1 - . ID=LTnewLM_360065200.1;Parent=LTnewLM_360065200 LTnewLM_36 AUGUSTUS CDS 2099335 2101926 1 - 0 ID=LTnewLM_360065200.1:CDS:1;Parent=LTnewLM_360065200.1 ### LTnewLM_36 . polypeptide 2099335 2101926 . - . ID=LTnewLM_360065200.1:pep;Derives_from=LTnewLM_360065200.1;orthologous_to=LmjF.36.5340_mRNA;ortholog_cluster=OG0006605;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2103703 2107470 1 - . ID=LTnewLM_360065300 LTnewLM_36 AUGUSTUS mRNA 2103703 2107470 1 - . ID=LTnewLM_360065300.1;Parent=LTnewLM_360065300 LTnewLM_36 AUGUSTUS CDS 2103703 2107470 1 - 0 ID=LTnewLM_360065300.1:CDS:1;Parent=LTnewLM_360065300.1 ### LTnewLM_36 . polypeptide 2103703 2107470 . - . ID=LTnewLM_360065300.1:pep;Derives_from=LTnewLM_360065300.1;orthologous_to=LmjF.36.5350_mRNA;ortholog_cluster=OG0006606;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/ABC1 atypical kinase-like domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF03109|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_36 Pfam protein_match 2106439 2107248 . - . Parent=LTnewLM_360065300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 2106589 2107245 . - . Parent=LTnewLM_360065300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 2106640 2106951 . - . Parent=LTnewLM_360065300.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_36 Pfam protein_match 2106805 2107047 . - . Parent=LTnewLM_360065300.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_36 AUGUSTUS gene 2108375 2109241 1 - . ID=LTnewLM_360065400 LTnewLM_36 AUGUSTUS mRNA 2108375 2109241 1 - . ID=LTnewLM_360065400.1;Parent=LTnewLM_360065400 LTnewLM_36 AUGUSTUS CDS 2108375 2109241 1 - 0 ID=LTnewLM_360065400.1:CDS:1;Parent=LTnewLM_360065400.1 ### LTnewLM_36 . polypeptide 2108375 2109241 . - . ID=LTnewLM_360065400.1:pep;Derives_from=LTnewLM_360065400.1;orthologous_to=LmjF.36.5360_mRNA;ortholog_cluster=OG0006607;product=term%3DubiE/COQ5 methyltransferase family/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01209|Pfam:PF13847|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_36 Pfam protein_match 2108480 2109211 . - . Parent=LTnewLM_360065400.1:pep;Name=PF01209;signature_desc=ubiE/COQ5 methyltransferase family;Ontology_term=GO:0008168 LTnewLM_36 Pfam protein_match 2108711 2109067 . - . Parent=LTnewLM_360065400.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_36 Pfam protein_match 2108729 2108971 . - . Parent=LTnewLM_360065400.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_36 Pfam protein_match 2108735 2109058 . - . Parent=LTnewLM_360065400.1:pep;Name=PF13649;signature_desc=Methyltransferase domain ### LTnewLM_36 AUGUSTUS gene 2109701 2111338 1 - . ID=LTnewLM_360065500 LTnewLM_36 AUGUSTUS mRNA 2109701 2111338 1 - . ID=LTnewLM_360065500.1;Parent=LTnewLM_360065500 LTnewLM_36 AUGUSTUS CDS 2109701 2111338 1 - 0 ID=LTnewLM_360065500.1:CDS:1;Parent=LTnewLM_360065500.1 ### LTnewLM_36 . polypeptide 2109701 2111338 . - . ID=LTnewLM_360065500.1:pep;Derives_from=LTnewLM_360065500.1;orthologous_to=LmjF.36.5365_mRNA;ortholog_cluster=OG0006608;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2115309 2116790 1 - . ID=LTnewLM_360065600 LTnewLM_36 AUGUSTUS mRNA 2115309 2116790 1 - . ID=LTnewLM_360065600.1;Parent=LTnewLM_360065600 LTnewLM_36 AUGUSTUS CDS 2115309 2116790 1 - 0 ID=LTnewLM_360065600.1:CDS:1;Parent=LTnewLM_360065600.1 ### LTnewLM_36 . polypeptide 2115309 2116790 . - . ID=LTnewLM_360065600.1:pep;Derives_from=LTnewLM_360065600.1;orthologous_to=LmjF.36.5370_mRNA;ortholog_cluster=OG0006609;product=term%3DProtein-tyrosine phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00102;Ontology_term=GO:0006470,GO:0004725 LTnewLM_36 Pfam protein_match 2115915 2116610 . - . Parent=LTnewLM_360065600.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 ### LTnewLM_36 AUGUSTUS gene 2119453 2121036 1 - . ID=LTnewLM_360065700 LTnewLM_36 AUGUSTUS mRNA 2119453 2121036 1 - . ID=LTnewLM_360065700.1;Parent=LTnewLM_360065700 LTnewLM_36 AUGUSTUS CDS 2119453 2121036 1 - 0 ID=LTnewLM_360065700.1:CDS:1;Parent=LTnewLM_360065700.1 ### LTnewLM_36 . polypeptide 2119453 2121036 . - . ID=LTnewLM_360065700.1:pep;Derives_from=LTnewLM_360065700.1;orthologous_to=LmjF.36.5380_mRNA;ortholog_cluster=OG0006610;product=term%3DPyridine nucleotide-disulphide oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF00070;Ontology_term=GO:0055114,GO:0016491,GO:0050660 LTnewLM_36 Pfam protein_match 2120005 2121000 . - . Parent=LTnewLM_360065700.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_36 Pfam protein_match 2120269 2120493 . - . Parent=LTnewLM_360065700.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 2122715 2123791 1 - . ID=LTnewLM_360065800 LTnewLM_36 AUGUSTUS mRNA 2122715 2123791 1 - . ID=LTnewLM_360065800.1;Parent=LTnewLM_360065800 LTnewLM_36 AUGUSTUS CDS 2122715 2123791 1 - 0 ID=LTnewLM_360065800.1:CDS:1;Parent=LTnewLM_360065800.1 ### LTnewLM_36 . polypeptide 2122715 2123791 . - . ID=LTnewLM_360065800.1:pep;Derives_from=LTnewLM_360065800.1;orthologous_to=LmjF.36.5390_mRNA;ortholog_cluster=OG0006611;product=term%3DN-terminal domain of ribose phosphate pyrophosphokinase/Phosphoribosyl transferase domain/Phosphoribosyl synthetase-associated domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13793|Pfam:PF00156|Pfam:PF14572;Ontology_term=GO:0009165,GO:0000287,GO:0009116,GO:0004749 LTnewLM_36 Pfam protein_match 2122820 2123155 . - . Parent=LTnewLM_360065800.1:pep;Name=PF14572;signature_desc=Phosphoribosyl synthetase-associated domain;Ontology_term=GO:0000287,GO:0004749,GO:0009165 LTnewLM_36 Pfam protein_match 2123003 2123299 . - . Parent=LTnewLM_360065800.1:pep;Name=PF00156;signature_desc=Phosphoribosyl transferase domain;Ontology_term=GO:0009116 LTnewLM_36 Pfam protein_match 2123399 2123758 . - . Parent=LTnewLM_360065800.1:pep;Name=PF13793;signature_desc=N-terminal domain of ribose phosphate pyrophosphokinase ### LTnewLM_36 AUGUSTUS gene 2124927 2126681 1 - . ID=LTnewLM_360065900 LTnewLM_36 AUGUSTUS mRNA 2124927 2126681 1 - . ID=LTnewLM_360065900.1;Parent=LTnewLM_360065900 LTnewLM_36 AUGUSTUS CDS 2124927 2126681 1 - 0 ID=LTnewLM_360065900.1:CDS:1;Parent=LTnewLM_360065900.1 ### LTnewLM_36 . polypeptide 2124927 2126681 . - . ID=LTnewLM_360065900.1:pep;Derives_from=LTnewLM_360065900.1;orthologous_to=LmjF.36.5400_mRNA;ortholog_cluster=OG0006612;product=term%3DBCS1 N terminal/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08740|Pfam:PF00004;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 2125530 2125622 . - . Parent=LTnewLM_360065900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 2125731 2126291 . - . Parent=LTnewLM_360065900.1:pep;Name=PF08740;signature_desc=BCS1 N terminal ### LTnewLM_36 AUGUSTUS gene 2127009 2128205 1 - . ID=LTnewLM_360066000 LTnewLM_36 AUGUSTUS mRNA 2127009 2128205 1 - . ID=LTnewLM_360066000.1;Parent=LTnewLM_360066000 LTnewLM_36 AUGUSTUS CDS 2127009 2128205 1 - 0 ID=LTnewLM_360066000.1:CDS:1;Parent=LTnewLM_360066000.1 ### LTnewLM_36 . polypeptide 2127009 2128205 . - . ID=LTnewLM_360066000.1:pep;Derives_from=LTnewLM_360066000.1;orthologous_to=LmjF.36.5410_mRNA;ortholog_cluster=OG0006613;product=term%3DAIR synthase related protein%2C N-terminal domain/AIR synthase related protein%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00586|Pfam:PF02769;Ontology_term=GO:0003824 LTnewLM_36 Pfam protein_match 2127066 2127596 . - . Parent=LTnewLM_360066000.1:pep;Name=PF02769;signature_desc=AIR synthase related protein%2C C-terminal domain LTnewLM_36 Pfam protein_match 2127642 2127932 . - . Parent=LTnewLM_360066000.1:pep;Name=PF00586;signature_desc=AIR synthase related protein%2C N-terminal domain;Ontology_term=GO:0003824 ### LTnewLM_36 AUGUSTUS gene 2128710 2129579 1 - . ID=LTnewLM_360066100 LTnewLM_36 AUGUSTUS mRNA 2128710 2129579 1 - . ID=LTnewLM_360066100.1;Parent=LTnewLM_360066100 LTnewLM_36 AUGUSTUS CDS 2128710 2129579 1 - 0 ID=LTnewLM_360066100.1:CDS:1;Parent=LTnewLM_360066100.1 ### LTnewLM_36 . polypeptide 2128710 2129579 . - . ID=LTnewLM_360066100.1:pep;Derives_from=LTnewLM_360066100.1;orthologous_to=LmjF.36.5420_mRNA;ortholog_cluster=OG0006614;product=term%3DKH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00013;Ontology_term=GO:0003723 LTnewLM_36 Pfam protein_match 2128983 2129201 . - . Parent=LTnewLM_360066100.1:pep;Name=PF00013;signature_desc=KH domain;Ontology_term=GO:0003723 ### LTnewLM_36 AUGUSTUS gene 2130075 2131235 1 - . ID=LTnewLM_360066200 LTnewLM_36 AUGUSTUS mRNA 2130075 2131235 1 - . ID=LTnewLM_360066200.1;Parent=LTnewLM_360066200 LTnewLM_36 AUGUSTUS CDS 2130075 2131235 1 - 0 ID=LTnewLM_360066200.1:CDS:1;Parent=LTnewLM_360066200.1 ### LTnewLM_36 . polypeptide 2130075 2131235 . - . ID=LTnewLM_360066200.1:pep;Derives_from=LTnewLM_360066200.1;orthologous_to=LmjF.36.5430_mRNA;ortholog_cluster=OG0006615;product=term%3DMacrocin-O-methyltransferase (TylF)/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05711|Pfam:PF13578 LTnewLM_36 Pfam protein_match 2130129 2130863 . - . Parent=LTnewLM_360066200.1:pep;Name=PF05711;signature_desc=Macrocin-O-methyltransferase (TylF) LTnewLM_36 Pfam protein_match 2130297 2130764 . - . Parent=LTnewLM_360066200.1:pep;Name=PF13578;signature_desc=Methyltransferase domain ### LTnewLM_36 AUGUSTUS gene 2132035 2133882 1 - . ID=LTnewLM_360066300 LTnewLM_36 AUGUSTUS mRNA 2132035 2133882 1 - . ID=LTnewLM_360066300.1;Parent=LTnewLM_360066300 LTnewLM_36 AUGUSTUS CDS 2132035 2133882 1 - 0 ID=LTnewLM_360066300.1:CDS:1;Parent=LTnewLM_360066300.1 ### LTnewLM_36 . polypeptide 2132035 2133882 . - . ID=LTnewLM_360066300.1:pep;Derives_from=LTnewLM_360066300.1;orthologous_to=LmjF.36.5440_mRNA;ortholog_cluster=OG0006616;product=term%3DSEP domain/UBX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08059|Pfam:PF00789;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2132056 2132274 . - . Parent=LTnewLM_360066300.1:pep;Name=PF00789;signature_desc=UBX domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2132728 2132904 . - . Parent=LTnewLM_360066300.1:pep;Name=PF08059;signature_desc=SEP domain ### LTnewLM_36 AUGUSTUS gene 2134647 2135924 1 - . ID=LTnewLM_360066400 LTnewLM_36 AUGUSTUS mRNA 2134647 2135924 1 - . ID=LTnewLM_360066400.1;Parent=LTnewLM_360066400 LTnewLM_36 AUGUSTUS CDS 2134647 2135924 1 - 0 ID=LTnewLM_360066400.1:CDS:1;Parent=LTnewLM_360066400.1 ### LTnewLM_36 . polypeptide 2134647 2135924 . - . ID=LTnewLM_360066400.1:pep;Derives_from=LTnewLM_360066400.1;orthologous_to=LmjF.36.5450_mRNA;ortholog_cluster=OG0006617;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2136884 2138452 1 - . ID=LTnewLM_360066500 LTnewLM_36 AUGUSTUS mRNA 2136884 2138452 1 - . ID=LTnewLM_360066500.1;Parent=LTnewLM_360066500 LTnewLM_36 AUGUSTUS CDS 2136884 2138452 1 - 0 ID=LTnewLM_360066500.1:CDS:1;Parent=LTnewLM_360066500.1 ### LTnewLM_36 . polypeptide 2136884 2138452 . - . ID=LTnewLM_360066500.1:pep;Derives_from=LTnewLM_360066500.1;orthologous_to=LmjF.36.5460_mRNA;ortholog_cluster=OG0006618;product=term%3DFAD dependent oxidoreductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01266;Ontology_term=GO:0055114,GO:0016491 LTnewLM_36 Pfam protein_match 2137127 2138281 . - . Parent=LTnewLM_360066500.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 2139541 2142453 1 - . ID=LTnewLM_360066600 LTnewLM_36 AUGUSTUS mRNA 2139541 2142453 1 - . ID=LTnewLM_360066600.1;Parent=LTnewLM_360066600 LTnewLM_36 AUGUSTUS CDS 2139541 2142453 1 - 0 ID=LTnewLM_360066600.1:CDS:1;Parent=LTnewLM_360066600.1 ### LTnewLM_36 . polypeptide 2139541 2142453 . - . ID=LTnewLM_360066600.1:pep;Derives_from=LTnewLM_360066600.1;orthologous_to=LmjF.36.5470_mRNA;ortholog_cluster=OG0006619;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2148538 2150550 1 - . ID=LTnewLM_360066700 LTnewLM_36 AUGUSTUS mRNA 2148538 2150550 1 - . ID=LTnewLM_360066700.1;Parent=LTnewLM_360066700 LTnewLM_36 AUGUSTUS CDS 2148538 2150550 1 - 0 ID=LTnewLM_360066700.1:CDS:1;Parent=LTnewLM_360066700.1 ### LTnewLM_36 . polypeptide 2148538 2150550 . - . ID=LTnewLM_360066700.1:pep;Derives_from=LTnewLM_360066700.1;orthologous_to=LmjF.36.5480_mRNA;ortholog_cluster=OG0006620;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2161306 2162193 1 - . ID=LTnewLM_360066800 LTnewLM_36 AUGUSTUS mRNA 2161306 2162193 1 - . ID=LTnewLM_360066800.1;Parent=LTnewLM_360066800 LTnewLM_36 AUGUSTUS CDS 2161306 2162193 1 - 0 ID=LTnewLM_360066800.1:CDS:1;Parent=LTnewLM_360066800.1 ### LTnewLM_36 . polypeptide 2161306 2162193 . - . ID=LTnewLM_360066800.1:pep;Derives_from=LTnewLM_360066800.1;orthologous_to=LmjF.36.5490_mRNA;ortholog_cluster=OG0006621;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2163546 2164637 1 - . ID=LTnewLM_360066900 LTnewLM_36 AUGUSTUS mRNA 2163546 2164637 1 - . ID=LTnewLM_360066900.1;Parent=LTnewLM_360066900 LTnewLM_36 AUGUSTUS CDS 2163546 2164637 1 - 0 ID=LTnewLM_360066900.1:CDS:1;Parent=LTnewLM_360066900.1 ### LTnewLM_36 . polypeptide 2163546 2164637 . - . ID=LTnewLM_360066900.1:pep;Derives_from=LTnewLM_360066900.1;orthologous_to=LmjF.36.5500_mRNA;ortholog_cluster=OG0006622;product=term%3DHaemolysin-III related%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03006;Ontology_term=GO:0016021 LTnewLM_36 Pfam protein_match 2163600 2164325 . - . Parent=LTnewLM_360066900.1:pep;Name=PF03006;signature_desc=Haemolysin-III related;Ontology_term=GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2165880 2167406 1 - . ID=LTnewLM_360067000 LTnewLM_36 AUGUSTUS mRNA 2165880 2167406 1 - . ID=LTnewLM_360067000.1;Parent=LTnewLM_360067000 LTnewLM_36 AUGUSTUS CDS 2165880 2167406 1 - 0 ID=LTnewLM_360067000.1:CDS:1;Parent=LTnewLM_360067000.1 ### LTnewLM_36 . polypeptide 2165880 2167406 . - . ID=LTnewLM_360067000.1:pep;Derives_from=LTnewLM_360067000.1;orthologous_to=LmjF.36.5510_mRNA;ortholog_cluster=OG0006623;product=term%3DHaemolysin-III related%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03006;Ontology_term=GO:0016021 LTnewLM_36 Pfam protein_match 2165940 2166608 . - . Parent=LTnewLM_360067000.1:pep;Name=PF03006;signature_desc=Haemolysin-III related;Ontology_term=GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2171201 2172214 1 - . ID=LTnewLM_360067100 LTnewLM_36 AUGUSTUS mRNA 2171201 2172214 1 - . ID=LTnewLM_360067100.1;Parent=LTnewLM_360067100 LTnewLM_36 AUGUSTUS CDS 2171201 2172214 1 - 0 ID=LTnewLM_360067100.1:CDS:1;Parent=LTnewLM_360067100.1 ### LTnewLM_36 . polypeptide 2171201 2172214 . - . ID=LTnewLM_360067100.1:pep;Derives_from=LTnewLM_360067100.1;orthologous_to=LmjF.36.5520_mRNA;ortholog_cluster=OG0006624;product=term%3DHaemolysin-III related%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03006;Ontology_term=GO:0016021 LTnewLM_36 Pfam protein_match 2171270 2171929 . - . Parent=LTnewLM_360067100.1:pep;Name=PF03006;signature_desc=Haemolysin-III related;Ontology_term=GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2173426 2175399 1 - . ID=LTnewLM_360067200 LTnewLM_36 AUGUSTUS mRNA 2173426 2175399 1 - . ID=LTnewLM_360067200.1;Parent=LTnewLM_360067200 LTnewLM_36 AUGUSTUS CDS 2173426 2175399 1 - 0 ID=LTnewLM_360067200.1:CDS:1;Parent=LTnewLM_360067200.1 ### LTnewLM_36 . polypeptide 2173426 2175399 . - . ID=LTnewLM_360067200.1:pep;Derives_from=LTnewLM_360067200.1;orthologous_to=LmjF.36.5530_mRNA;ortholog_cluster=OG0006625;product=term%3DPhosphorylated CTD interacting factor 1 WW domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12237 LTnewLM_36 Pfam protein_match 2174071 2174370 . - . Parent=LTnewLM_360067200.1:pep;Name=PF12237;signature_desc=Phosphorylated CTD interacting factor 1 WW domain ### LTnewLM_36 AUGUSTUS gene 2175984 2177324 1 - . ID=LTnewLM_360067300 LTnewLM_36 AUGUSTUS mRNA 2175984 2177324 1 - . ID=LTnewLM_360067300.1;Parent=LTnewLM_360067300 LTnewLM_36 AUGUSTUS CDS 2175984 2177324 1 - 0 ID=LTnewLM_360067300.1:CDS:1;Parent=LTnewLM_360067300.1 ### LTnewLM_36 . polypeptide 2175984 2177324 . - . ID=LTnewLM_360067300.1:pep;Derives_from=LTnewLM_360067300.1;orthologous_to=LmjF.36.5540_mRNA;ortholog_cluster=OG0006626;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2178097 2182002 1 - . ID=LTnewLM_360067400 LTnewLM_36 AUGUSTUS mRNA 2178097 2182002 1 - . ID=LTnewLM_360067400.1;Parent=LTnewLM_360067400 LTnewLM_36 AUGUSTUS CDS 2178097 2182002 1 - 0 ID=LTnewLM_360067400.1:CDS:1;Parent=LTnewLM_360067400.1 ### LTnewLM_36 . polypeptide 2178097 2182002 . - . ID=LTnewLM_360067400.1:pep;Derives_from=LTnewLM_360067400.1;orthologous_to=LmjF.36.5550_mRNA;ortholog_cluster=OG0006627;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2182853 2185363 1 - . ID=LTnewLM_360067500 LTnewLM_36 AUGUSTUS mRNA 2182853 2185363 1 - . ID=LTnewLM_360067500.1;Parent=LTnewLM_360067500 LTnewLM_36 AUGUSTUS CDS 2182853 2185363 1 - 0 ID=LTnewLM_360067500.1:CDS:1;Parent=LTnewLM_360067500.1 ### LTnewLM_36 . polypeptide 2182853 2185363 . - . ID=LTnewLM_360067500.1:pep;Derives_from=LTnewLM_360067500.1;orthologous_to=LmjF.36.5560_mRNA;ortholog_cluster=OG0006628;product=term%3DAminopeptidase P%2C N-terminal domain/Metallopeptidase family M24%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05195|Pfam:PF00557;Ontology_term=GO:0030145,GO:0004177 LTnewLM_36 Pfam protein_match 2183318 2184169 . - . Parent=LTnewLM_360067500.1:pep;Name=PF00557;signature_desc=Metallopeptidase family M24 LTnewLM_36 Pfam protein_match 2185094 2185243 . - . Parent=LTnewLM_360067500.1:pep;Name=PF05195;signature_desc=Aminopeptidase P%2C N-terminal domain;Ontology_term=GO:0004177,GO:0030145 ### LTnewLM_36 . pseudogene 2186260 2187002 . - . ID=LTnewLM_360067600:pseudogene;coverage=0.994;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5570_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2186260 2187002 . - . ID=LTnewLM_360067600.1;Parent=LTnewLM_360067600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2186260 2187002 . - . ID=LTnewLM_360067600.1:pseudogenic_exon:1;Parent=LTnewLM_360067600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2186260 2187002 . - . ID=LTnewLM_360067600.1:pep;Derives_from=LTnewLM_360067600.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2188199 2189317 1 - . ID=LTnewLM_360067700 LTnewLM_36 AUGUSTUS mRNA 2188199 2189317 1 - . ID=LTnewLM_360067700.1;Parent=LTnewLM_360067700 LTnewLM_36 AUGUSTUS CDS 2188199 2189317 1 - 0 ID=LTnewLM_360067700.1:CDS:1;Parent=LTnewLM_360067700.1 ### LTnewLM_36 . polypeptide 2188199 2189317 . - . ID=LTnewLM_360067700.1:pep;Derives_from=LTnewLM_360067700.1;orthologous_to=LmjF.36.5580_mRNA;ortholog_cluster=OG0006629;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2190662 2191486 1 - . ID=LTnewLM_360067800 LTnewLM_36 AUGUSTUS mRNA 2190662 2191486 1 - . ID=LTnewLM_360067800.1;Parent=LTnewLM_360067800 LTnewLM_36 AUGUSTUS CDS 2190662 2191486 1 - 0 ID=LTnewLM_360067800.1:CDS:1;Parent=LTnewLM_360067800.1 ### LTnewLM_36 . polypeptide 2190662 2191486 . - . ID=LTnewLM_360067800.1:pep;Derives_from=LTnewLM_360067800.1;orthologous_to=LmjF.36.5590_mRNA;ortholog_cluster=OG0006630;product=term%3DAdenylate cyclase associated (CAP) C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08603;Ontology_term=GO:0007010,GO:0003779 LTnewLM_36 Pfam protein_match 2190674 2191174 . - . Parent=LTnewLM_360067800.1:pep;Name=PF08603;signature_desc=Adenylate cyclase associated (CAP) C terminal;Ontology_term=GO:0003779,GO:0007010 ### LTnewLM_36 AUGUSTUS gene 2192570 2192977 1 - . ID=LTnewLM_360067900 LTnewLM_36 AUGUSTUS mRNA 2192570 2192977 1 - . ID=LTnewLM_360067900.1;Parent=LTnewLM_360067900 LTnewLM_36 AUGUSTUS CDS 2192570 2192977 1 - 0 ID=LTnewLM_360067900.1:CDS:1;Parent=LTnewLM_360067900.1 ### LTnewLM_36 . polypeptide 2192570 2192977 . - . ID=LTnewLM_360067900.1:pep;Derives_from=LTnewLM_360067900.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2193851 2194183 1 - . ID=LTnewLM_360068000 LTnewLM_36 AUGUSTUS mRNA 2193851 2194183 1 - . ID=LTnewLM_360068000.1;Parent=LTnewLM_360068000 LTnewLM_36 AUGUSTUS CDS 2193851 2194183 1 - 0 ID=LTnewLM_360068000.1:CDS:1;Parent=LTnewLM_360068000.1 ### LTnewLM_36 . polypeptide 2193851 2194183 . - . ID=LTnewLM_360068000.1:pep;Derives_from=LTnewLM_360068000.1;orthologous_to=LTnewLM_360081500.1,LmjF.36.6770_mRNA;ortholog_cluster=OG0000483;product=term%3DAdaptin N terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_36 Pfam protein_match 2193860 2194153 . - . Parent=LTnewLM_360068000.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 ### LTnewLM_36 AUGUSTUS gene 2194864 2196561 1 - . ID=LTnewLM_360068100 LTnewLM_36 AUGUSTUS mRNA 2194864 2196561 1 - . ID=LTnewLM_360068100.1;Parent=LTnewLM_360068100 LTnewLM_36 AUGUSTUS CDS 2194864 2196561 1 - 0 ID=LTnewLM_360068100.1:CDS:1;Parent=LTnewLM_360068100.1 ### LTnewLM_36 . polypeptide 2194864 2196561 . - . ID=LTnewLM_360068100.1:pep;Derives_from=LTnewLM_360068100.1;orthologous_to=LmjF.36.5600_mRNA;ortholog_cluster=OG0006631;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2197250 2198569 1 - . ID=LTnewLM_360068200 LTnewLM_36 AUGUSTUS mRNA 2197250 2198569 1 - . ID=LTnewLM_360068200.1;Parent=LTnewLM_360068200 LTnewLM_36 AUGUSTUS CDS 2197250 2198569 1 - 0 ID=LTnewLM_360068200.1:CDS:1;Parent=LTnewLM_360068200.1 ### LTnewLM_36 . polypeptide 2197250 2198569 . - . ID=LTnewLM_360068200.1:pep;Derives_from=LTnewLM_360068200.1;orthologous_to=LmjF.36.5610_mRNA;ortholog_cluster=OG0006632;product=term%3DNuclease-related domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08378 LTnewLM_36 Pfam protein_match 2197931 2198383 . - . Parent=LTnewLM_360068200.1:pep;Name=PF08378;signature_desc=Nuclease-related domain ### LTnewLM_36 . polypeptide 2201142 2204441 . - . ID=LTnewLM_360068300.1:pep;Derives_from=LTnewLM_360068300.1;orthologous_to=LTnewLM_360068300.2,LmjF.36.5620.1_mRNA,LmjF.36.5620.2_mRNA;ortholog_cluster=OG0000264;product=term%3DtRNA synthetases class I (I%2C L%2C M and V)/Anticodon-binding domain of tRNA ligase/Domain of unknown function (DUF5915)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00133|Pfam:PF08264|Pfam:PF19302;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_36 Pfam protein_match 2201232 2201744 . - . Parent=LTnewLM_360068300.1:pep;Name=PF19302;signature_desc=Domain of unknown function (DUF5915) LTnewLM_36 Pfam protein_match 2201808 2202260 . - . Parent=LTnewLM_360068300.1:pep;Name=PF08264;signature_desc=Anticodon-binding domain of tRNA ligase;Ontology_term=GO:0000166,GO:0006418 LTnewLM_36 Pfam protein_match 2202417 2204333 . - . Parent=LTnewLM_360068300.1:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_36 . polypeptide 2201142 2204825 . - . ID=LTnewLM_360068300.2:pep;Derives_from=LTnewLM_360068300.2;orthologous_to=LTnewLM_360068300.1,LmjF.36.5620.1_mRNA,LmjF.36.5620.2_mRNA;ortholog_cluster=OG0000264;product=term%3DtRNA synthetases class I (I%2C L%2C M and V)/Anticodon-binding domain of tRNA ligase/Domain of unknown function (DUF5915)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00133|Pfam:PF08264|Pfam:PF19302;Ontology_term=GO:0004812,GO:0006418,GO:0000166,GO:0005524 LTnewLM_36 Pfam protein_match 2201232 2201744 . - . Parent=LTnewLM_360068300.2:pep;Name=PF19302;signature_desc=Domain of unknown function (DUF5915) LTnewLM_36 Pfam protein_match 2201808 2202260 . - . Parent=LTnewLM_360068300.2:pep;Name=PF08264;signature_desc=Anticodon-binding domain of tRNA ligase;Ontology_term=GO:0000166,GO:0006418 LTnewLM_36 Pfam protein_match 2202417 2204333 . - . Parent=LTnewLM_360068300.2:pep;Name=PF00133;signature_desc=tRNA synthetases class I (I%2C L%2C M and V);Ontology_term=GO:0000166,GO:0004812,GO:0005524,GO:0006418 ### LTnewLM_36 Liftoff gene 2201142 2205238 . - . ID=LTnewLM_360068300;coverage=0.997;sequence_ID=0.955;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.36.5620_0 LTnewLM_36 Liftoff mRNA 2201142 2204577 . - . ID=LTnewLM_360068300.1;Parent=LTnewLM_360068300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2201142 2204441 . - 0 ID=LTnewLM_360068300.1:CDS:1;Parent=LTnewLM_360068300.1;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 2204442 2204577 . - . ID=LTnewLM_360068300:five_prime_UTR;Parent=LTnewLM_360068300.1;extra_copy_number=0 LTnewLM_36 Liftoff mRNA 2201142 2205238 . - . ID=LTnewLM_360068300.2;Parent=LTnewLM_360068300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2201142 2204825 . - 0 ID=LTnewLM_360068300.2:CDS:1;Parent=LTnewLM_360068300.2;extra_copy_number=0 LTnewLM_36 Liftoff five_prime_UTR 2204826 2205238 . - . ID=LTnewLM_360068300:five_prime_UTR.1;Parent=LTnewLM_360068300.2;extra_copy_number=0 ### LTnewLM_36 AUGUSTUS gene 2205972 2206679 1 - . ID=LTnewLM_360068400 LTnewLM_36 AUGUSTUS mRNA 2205972 2206679 1 - . ID=LTnewLM_360068400.1;Parent=LTnewLM_360068400 LTnewLM_36 AUGUSTUS CDS 2205972 2206679 1 - 0 ID=LTnewLM_360068400.1:CDS:1;Parent=LTnewLM_360068400.1 ### LTnewLM_36 . polypeptide 2205972 2206679 . - . ID=LTnewLM_360068400.1:pep;Derives_from=LTnewLM_360068400.1;orthologous_to=LmjF.36.5630_mRNA;ortholog_cluster=OG0006633;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2207534 2209021 1 - . ID=LTnewLM_360068500 LTnewLM_36 AUGUSTUS mRNA 2207534 2209021 1 - . ID=LTnewLM_360068500.1;Parent=LTnewLM_360068500 LTnewLM_36 AUGUSTUS CDS 2207534 2209021 1 - 0 ID=LTnewLM_360068500.1:CDS:1;Parent=LTnewLM_360068500.1 ### LTnewLM_36 . polypeptide 2207534 2209021 . - . ID=LTnewLM_360068500.1:pep;Derives_from=LTnewLM_360068500.1;orthologous_to=LmjF.36.5640_mRNA;ortholog_cluster=OG0006634;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2209785 2210768 1 - . ID=LTnewLM_360068600 LTnewLM_36 AUGUSTUS mRNA 2209785 2210768 1 - . ID=LTnewLM_360068600.1;Parent=LTnewLM_360068600 LTnewLM_36 AUGUSTUS CDS 2209785 2210768 1 - 0 ID=LTnewLM_360068600.1:CDS:1;Parent=LTnewLM_360068600.1 ### LTnewLM_36 . polypeptide 2209785 2210768 . - . ID=LTnewLM_360068600.1:pep;Derives_from=LTnewLM_360068600.1;orthologous_to=LmjF.36.5650_mRNA;ortholog_cluster=OG0006635;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2211629 2213782 1 - . ID=LTnewLM_360068700 LTnewLM_36 AUGUSTUS mRNA 2211629 2213782 1 - . ID=LTnewLM_360068700.1;Parent=LTnewLM_360068700 LTnewLM_36 AUGUSTUS CDS 2211629 2213782 1 - 0 ID=LTnewLM_360068700.1:CDS:1;Parent=LTnewLM_360068700.1 ### LTnewLM_36 . polypeptide 2211629 2213782 . - . ID=LTnewLM_360068700.1:pep;Derives_from=LTnewLM_360068700.1;orthologous_to=LmjF.36.5660_mRNA;ortholog_cluster=OG0006636;product=term%3DPyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/NAD(P)-binding Rossmann-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00070|Pfam:PF01266|Pfam:PF13450;Ontology_term=GO:0055114,GO:0016491,GO:0050660 LTnewLM_36 Pfam protein_match 2212862 2213680 . - . Parent=LTnewLM_360068700.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_36 Pfam protein_match 2213582 2213677 . - . Parent=LTnewLM_360068700.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_36 Pfam protein_match 2213585 2213683 . - . Parent=LTnewLM_360068700.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 2215103 2217196 1 - . ID=LTnewLM_360068800 LTnewLM_36 AUGUSTUS mRNA 2215103 2217196 1 - . ID=LTnewLM_360068800.1;Parent=LTnewLM_360068800 LTnewLM_36 AUGUSTUS CDS 2215103 2217196 1 - 0 ID=LTnewLM_360068800.1:CDS:1;Parent=LTnewLM_360068800.1 ### LTnewLM_36 . polypeptide 2215103 2217196 . - . ID=LTnewLM_360068800.1:pep;Derives_from=LTnewLM_360068800.1;orthologous_to=LmjF.36.5670_mRNA;ortholog_cluster=OG0006637;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)/Oligonucleotide/oligosaccharide-binding (OB)-fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408|Pfam:PF07717;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_36 Pfam protein_match 2215130 2215363 . - . Parent=LTnewLM_360068800.1:pep;Name=PF07717;signature_desc=Oligonucleotide/oligosaccharide-binding (OB)-fold LTnewLM_36 Pfam protein_match 2215727 2215990 . - . Parent=LTnewLM_360068800.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_36 Pfam protein_match 2216177 2216572 . - . Parent=LTnewLM_360068800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_36 Pfam protein_match 2216687 2217160 . - . Parent=LTnewLM_360068800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_36 AUGUSTUS gene 2217956 2218672 1 - . ID=LTnewLM_360068900 LTnewLM_36 AUGUSTUS mRNA 2217956 2218672 1 - . ID=LTnewLM_360068900.1;Parent=LTnewLM_360068900 LTnewLM_36 AUGUSTUS CDS 2217956 2218672 1 - 0 ID=LTnewLM_360068900.1:CDS:1;Parent=LTnewLM_360068900.1 ### LTnewLM_36 . polypeptide 2217956 2218672 . - . ID=LTnewLM_360068900.1:pep;Derives_from=LTnewLM_360068900.1;orthologous_to=LmjF.36.5680_mRNA;ortholog_cluster=OG0006638;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2219166 2220134 1 - . ID=LTnewLM_360069000 LTnewLM_36 AUGUSTUS mRNA 2219166 2220134 1 - . ID=LTnewLM_360069000.1;Parent=LTnewLM_360069000 LTnewLM_36 AUGUSTUS CDS 2219166 2220134 1 - 0 ID=LTnewLM_360069000.1:CDS:1;Parent=LTnewLM_360069000.1 ### LTnewLM_36 . polypeptide 2219166 2220134 . - . ID=LTnewLM_360069000.1:pep;Derives_from=LTnewLM_360069000.1;orthologous_to=LmjF.36.5690_mRNA;ortholog_cluster=OG0006639;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2221919 2224291 1 - . ID=LTnewLM_360069100 LTnewLM_36 AUGUSTUS mRNA 2221919 2224291 1 - . ID=LTnewLM_360069100.1;Parent=LTnewLM_360069100 LTnewLM_36 AUGUSTUS CDS 2221919 2224291 1 - 0 ID=LTnewLM_360069100.1:CDS:1;Parent=LTnewLM_360069100.1 ### LTnewLM_36 . polypeptide 2221919 2224291 . - . ID=LTnewLM_360069100.1:pep;Derives_from=LTnewLM_360069100.1;orthologous_to=LmjF.36.5700_mRNA;ortholog_cluster=OG0006640;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Liftoff gene 2226373 2227179 . - . ID=LTnewLM_360069200;coverage=0.996;sequence_ID=0.944;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5710_0 LTnewLM_36 Liftoff mRNA 2226373 2227179 . - . ID=LTnewLM_360069200.1;Parent=LTnewLM_360069200;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2226373 2227179 . - 0 ID=LTnewLM_360069200.1:CDS:1;Parent=LTnewLM_360069200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2226373 2227179 . - . ID=LTnewLM_360069200.1:pep;Derives_from=LTnewLM_360069200.1;orthologous_to=LmjF.36.5710_mRNA;ortholog_cluster=OG0006641;product=term%3DCullin binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03556 LTnewLM_36 Pfam protein_match 2226409 2226816 . - . Parent=LTnewLM_360069200.1:pep;Name=PF03556;signature_desc=Cullin binding ### LTnewLM_36 AUGUSTUS gene 2228370 2228636 1 - . ID=LTnewLM_360069300 LTnewLM_36 AUGUSTUS mRNA 2228370 2228636 1 - . ID=LTnewLM_360069300.1;Parent=LTnewLM_360069300 LTnewLM_36 AUGUSTUS CDS 2228370 2228636 1 - 0 ID=LTnewLM_360069300.1:CDS:1;Parent=LTnewLM_360069300.1 ### LTnewLM_36 . polypeptide 2228370 2228636 . - . ID=LTnewLM_360069300.1:pep;Derives_from=LTnewLM_360069300.1;orthologous_to=LmjF.36.5720_mRNA;ortholog_cluster=OG0006642;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2229257 2231275 1 - . ID=LTnewLM_360069400 LTnewLM_36 AUGUSTUS mRNA 2229257 2231275 1 - . ID=LTnewLM_360069400.1;Parent=LTnewLM_360069400 LTnewLM_36 AUGUSTUS CDS 2229257 2231275 1 - 0 ID=LTnewLM_360069400.1:CDS:1;Parent=LTnewLM_360069400.1 ### LTnewLM_36 . polypeptide 2229257 2231275 . - . ID=LTnewLM_360069400.1:pep;Derives_from=LTnewLM_360069400.1;orthologous_to=LmjF.36.5730_mRNA;ortholog_cluster=OG0006643;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 2231762 2234087 . - . ID=LTnewLM_360069500:pseudogene;coverage=0.996;sequence_ID=0.920;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5740_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2231762 2234087 . - . ID=LTnewLM_360069500.1;Parent=LTnewLM_360069500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2231762 2234087 . - . ID=LTnewLM_360069500.1:pseudogenic_exon:1;Parent=LTnewLM_360069500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2231762 2234087 . - . ID=LTnewLM_360069500.1:pep;Derives_from=LTnewLM_360069500.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2234703 2236745 1 - . ID=LTnewLM_360069600 LTnewLM_36 AUGUSTUS mRNA 2234703 2236745 1 - . ID=LTnewLM_360069600.1;Parent=LTnewLM_360069600 LTnewLM_36 AUGUSTUS CDS 2234703 2236745 1 - 0 ID=LTnewLM_360069600.1:CDS:1;Parent=LTnewLM_360069600.1 ### LTnewLM_36 . polypeptide 2234703 2236745 . - . ID=LTnewLM_360069600.1:pep;Derives_from=LTnewLM_360069600.1;orthologous_to=LmjF.36.5750_mRNA;ortholog_cluster=OG0006644;product=term%3DtRNA pseudouridine synthase D (TruD)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01142;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_36 Pfam protein_match 2234964 2236112 . - . Parent=LTnewLM_360069600.1:pep;Name=PF01142;signature_desc=tRNA pseudouridine synthase D (TruD);Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_36 AUGUSTUS gene 2237417 2242729 1 - . ID=LTnewLM_360069700 LTnewLM_36 AUGUSTUS mRNA 2237417 2242729 1 - . ID=LTnewLM_360069700.1;Parent=LTnewLM_360069700 LTnewLM_36 AUGUSTUS CDS 2237417 2242729 1 - 0 ID=LTnewLM_360069700.1:CDS:1;Parent=LTnewLM_360069700.1 ### LTnewLM_36 . polypeptide 2237417 2242729 . - . ID=LTnewLM_360069700.1:pep;Derives_from=LTnewLM_360069700.1;orthologous_to=LmjF.36.5760_mRNA;ortholog_cluster=OG0006645;product=term%3DRab3 GTPase-activating protein regulatory subunit N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14655 LTnewLM_36 Pfam protein_match 2240966 2241457 . - . Parent=LTnewLM_360069700.1:pep;Name=PF14655;signature_desc=Rab3 GTPase-activating protein regulatory subunit N-terminus ### LTnewLM_36 AUGUSTUS gene 2243668 2244183 1 - . ID=LTnewLM_360069800 LTnewLM_36 AUGUSTUS mRNA 2243668 2244183 1 - . ID=LTnewLM_360069800.1;Parent=LTnewLM_360069800 LTnewLM_36 AUGUSTUS CDS 2243668 2244183 1 - 0 ID=LTnewLM_360069800.1:CDS:1;Parent=LTnewLM_360069800.1 ### LTnewLM_36 . polypeptide 2243668 2244183 . - . ID=LTnewLM_360069800.1:pep;Derives_from=LTnewLM_360069800.1;orthologous_to=LmjF.36.5770_mRNA;ortholog_cluster=OG0006646;product=term%3DMechanosensitive ion channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00924;Ontology_term=GO:0016020,GO:0055085 LTnewLM_36 Pfam protein_match 2243788 2244096 . - . Parent=LTnewLM_360069800.1:pep;Name=PF00924;signature_desc=Mechanosensitive ion channel;Ontology_term=GO:0055085,GO:0016020 ### LTnewLM_36 AUGUSTUS gene 2246227 2247621 1 - . ID=LTnewLM_360069900 LTnewLM_36 AUGUSTUS mRNA 2246227 2247621 1 - . ID=LTnewLM_360069900.1;Parent=LTnewLM_360069900 LTnewLM_36 AUGUSTUS CDS 2246227 2247621 1 - 0 ID=LTnewLM_360069900.1:CDS:1;Parent=LTnewLM_360069900.1 ### LTnewLM_36 . polypeptide 2246227 2247621 . - . ID=LTnewLM_360069900.1:pep;Derives_from=LTnewLM_360069900.1;orthologous_to=LmjF.36.5780_mRNA;ortholog_cluster=OG0006647;product=term%3DGcd10p family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04189;Ontology_term=GO:0030488,GO:0031515 LTnewLM_36 Pfam protein_match 2246914 2247606 . - . Parent=LTnewLM_360069900.1:pep;Name=PF04189;signature_desc=Gcd10p family;Ontology_term=GO:0030488,GO:0031515 ### LTnewLM_36 AUGUSTUS gene 2248454 2249209 1 - . ID=LTnewLM_360070000 LTnewLM_36 AUGUSTUS mRNA 2248454 2249209 1 - . ID=LTnewLM_360070000.1;Parent=LTnewLM_360070000 LTnewLM_36 AUGUSTUS CDS 2248454 2249209 1 - 0 ID=LTnewLM_360070000.1:CDS:1;Parent=LTnewLM_360070000.1 ### LTnewLM_36 . polypeptide 2248454 2249209 . - . ID=LTnewLM_360070000.1:pep;Derives_from=LTnewLM_360070000.1;orthologous_to=LmjF.36.5790_mRNA;ortholog_cluster=OG0006648;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2250012 2255609 1 - . ID=LTnewLM_360070100 LTnewLM_36 AUGUSTUS mRNA 2250012 2255609 1 - . ID=LTnewLM_360070100.1;Parent=LTnewLM_360070100 LTnewLM_36 AUGUSTUS CDS 2250012 2255609 1 - 0 ID=LTnewLM_360070100.1:CDS:1;Parent=LTnewLM_360070100.1 ### LTnewLM_36 . polypeptide 2250012 2255609 . - . ID=LTnewLM_360070100.1:pep;Derives_from=LTnewLM_360070100.1;orthologous_to=LmjF.36.5800_mRNA;ortholog_cluster=OG0006649;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 2256433 2257980 . - . ID=LTnewLM_360070200:pseudogene;coverage=1.0;sequence_ID=0.922;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5810_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2256433 2257980 . - . ID=LTnewLM_360070200.1;Parent=LTnewLM_360070200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2256433 2257980 . - . ID=LTnewLM_360070200.1:pseudogenic_exon:1;Parent=LTnewLM_360070200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2256433 2257980 . - . ID=LTnewLM_360070200.1:pep;Derives_from=LTnewLM_360070200.1;orthologous_to=LmjF.36.5810_mRNA;ortholog_cluster=OG0007697;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2260780 2262282 1 - . ID=LTnewLM_360070300 LTnewLM_36 AUGUSTUS mRNA 2260780 2262282 1 - . ID=LTnewLM_360070300.1;Parent=LTnewLM_360070300 LTnewLM_36 AUGUSTUS CDS 2260780 2262282 1 - 0 ID=LTnewLM_360070300.1:CDS:1;Parent=LTnewLM_360070300.1 ### LTnewLM_36 . polypeptide 2260780 2262282 . - . ID=LTnewLM_360070300.1:pep;Derives_from=LTnewLM_360070300.1;orthologous_to=LmjF.36.5820_mRNA;ortholog_cluster=OG0006650;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . pseudogene 2265120 2265821 . - . ID=LTnewLM_360070400:pseudogene;coverage=1.0;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.5830_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2265120 2265821 . - . ID=LTnewLM_360070400.1;Parent=LTnewLM_360070400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2265120 2265821 . - . ID=LTnewLM_360070400.1:pseudogenic_exon:1;Parent=LTnewLM_360070400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2265120 2265821 . - . ID=LTnewLM_360070400.1:pep;Derives_from=LTnewLM_360070400.1;orthologous_to=LmjF.36.5830_mRNA;ortholog_cluster=OG0007698;product=term%3DNitroreductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00881 LTnewLM_36 Pfam protein_match 2265201 2265704 . - . Parent=LTnewLM_360070400.1:pep;Name=PF00881;signature_desc=Nitroreductase family ### LTnewLM_36 AUGUSTUS gene 2266957 2268000 1 - . ID=LTnewLM_360070500 LTnewLM_36 AUGUSTUS mRNA 2266957 2268000 1 - . ID=LTnewLM_360070500.1;Parent=LTnewLM_360070500 LTnewLM_36 AUGUSTUS CDS 2266957 2268000 1 - 0 ID=LTnewLM_360070500.1:CDS:1;Parent=LTnewLM_360070500.1 ### LTnewLM_36 . polypeptide 2266957 2268000 . - . ID=LTnewLM_360070500.1:pep;Derives_from=LTnewLM_360070500.1;orthologous_to=LmjF.36.5840_mRNA;ortholog_cluster=OG0006651;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2270915 2271289 1 - . ID=LTnewLM_360070600 LTnewLM_36 AUGUSTUS mRNA 2270915 2271289 1 - . ID=LTnewLM_360070600.1;Parent=LTnewLM_360070600 LTnewLM_36 AUGUSTUS CDS 2270915 2271289 1 - 0 ID=LTnewLM_360070600.1:CDS:1;Parent=LTnewLM_360070600.1 ### LTnewLM_36 . polypeptide 2270915 2271289 . - . ID=LTnewLM_360070600.1:pep;Derives_from=LTnewLM_360070600.1;orthologous_to=LmjF.36.5845_mRNA;ortholog_cluster=OG0006652;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2275642 2277162 1 - . ID=LTnewLM_360070700 LTnewLM_36 AUGUSTUS mRNA 2275642 2277162 1 - . ID=LTnewLM_360070700.1;Parent=LTnewLM_360070700 LTnewLM_36 AUGUSTUS CDS 2275642 2277162 1 - 0 ID=LTnewLM_360070700.1:CDS:1;Parent=LTnewLM_360070700.1 ### LTnewLM_36 . polypeptide 2275642 2277162 . - . ID=LTnewLM_360070700.1:pep;Derives_from=LTnewLM_360070700.1;orthologous_to=LmjF.36.5850_mRNA;ortholog_cluster=OG0006653;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2280862 2283021 1 - . ID=LTnewLM_360070800 LTnewLM_36 AUGUSTUS mRNA 2280862 2283021 1 - . ID=LTnewLM_360070800.1;Parent=LTnewLM_360070800 LTnewLM_36 AUGUSTUS CDS 2280862 2283021 1 - 0 ID=LTnewLM_360070800.1:CDS:1;Parent=LTnewLM_360070800.1 ### LTnewLM_36 . polypeptide 2280862 2283021 . - . ID=LTnewLM_360070800.1:pep;Derives_from=LTnewLM_360070800.1;orthologous_to=LmjF.36.5860_mRNA;ortholog_cluster=OG0006654;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004;Ontology_term=GO:0016887,GO:0005524 LTnewLM_36 Pfam protein_match 2281873 2282088 . - . Parent=LTnewLM_360070800.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_36 Pfam protein_match 2281876 2282085 . - . Parent=LTnewLM_360070800.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_36 AUGUSTUS gene 2284658 2287045 1 - . ID=LTnewLM_360070900 LTnewLM_36 AUGUSTUS mRNA 2284658 2287045 1 - . ID=LTnewLM_360070900.1;Parent=LTnewLM_360070900 LTnewLM_36 AUGUSTUS CDS 2284658 2287045 1 - 0 ID=LTnewLM_360070900.1:CDS:1;Parent=LTnewLM_360070900.1 ### LTnewLM_36 . polypeptide 2284658 2287045 . - . ID=LTnewLM_360070900.1:pep;Derives_from=LTnewLM_360070900.1;orthologous_to=LmjF.36.5870_mRNA;ortholog_cluster=OG0006655;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2287871 2288965 1 - . ID=LTnewLM_360071000 LTnewLM_36 AUGUSTUS mRNA 2287871 2288965 1 - . ID=LTnewLM_360071000.1;Parent=LTnewLM_360071000 LTnewLM_36 AUGUSTUS CDS 2287871 2288965 1 - 0 ID=LTnewLM_360071000.1:CDS:1;Parent=LTnewLM_360071000.1 ### LTnewLM_36 . polypeptide 2287871 2288965 . - . ID=LTnewLM_360071000.1:pep;Derives_from=LTnewLM_360071000.1;orthologous_to=LmjF.36.5880_mRNA;ortholog_cluster=OG0006656;product=term%3D50S ribosome-binding GTPase/ADP-ribosylation factor family/Gtr1/RagA G protein conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926|Pfam:PF00025|Pfam:PF04670;Ontology_term=GO:0005525,GO:0005737,GO:0005634 LTnewLM_36 Pfam protein_match 2288237 2288938 . - . Parent=LTnewLM_360071000.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_36 Pfam protein_match 2288543 2288938 . - . Parent=LTnewLM_360071000.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 2288633 2288938 . - . Parent=LTnewLM_360071000.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_36 Liftoff gene 2289919 2296035 . - . ID=LTnewLM_360071100;coverage=1.0;sequence_ID=0.928;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.5890_0 LTnewLM_36 Liftoff mRNA 2289919 2296035 . - . ID=LTnewLM_360071100.1;Parent=LTnewLM_360071100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2289919 2296035 . - 0 ID=LTnewLM_360071100.1:CDS:1;Parent=LTnewLM_360071100.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2289919 2296035 . - . ID=LTnewLM_360071100.1:pep;Derives_from=LTnewLM_360071100.1;orthologous_to=LmjF.36.5890_mRNA;ortholog_cluster=OG0006657;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2298104 2299357 1 - . ID=LTnewLM_360071200 LTnewLM_36 AUGUSTUS mRNA 2298104 2299357 1 - . ID=LTnewLM_360071200.1;Parent=LTnewLM_360071200 LTnewLM_36 AUGUSTUS CDS 2298104 2299357 1 - 0 ID=LTnewLM_360071200.1:CDS:1;Parent=LTnewLM_360071200.1 ### LTnewLM_36 . polypeptide 2298104 2299357 . - . ID=LTnewLM_360071200.1:pep;Derives_from=LTnewLM_360071200.1;orthologous_to=LTnewLM_030013400.1,LmjF.36.5900_mRNA;ortholog_cluster=OG0000427;product=term%3DCDP-alcohol phosphatidyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01066;Ontology_term=GO:0008654,GO:0016020,GO:0016780 LTnewLM_36 Pfam protein_match 2298857 2299177 . - . Parent=LTnewLM_360071200.1:pep;Name=PF01066;signature_desc=CDP-alcohol phosphatidyltransferase;Ontology_term=GO:0016780,GO:0008654,GO:0016020 ### LTnewLM_36 AUGUSTUS gene 2302752 2303876 1 - . ID=LTnewLM_360071300 LTnewLM_36 AUGUSTUS mRNA 2302752 2303876 1 - . ID=LTnewLM_360071300.1;Parent=LTnewLM_360071300 LTnewLM_36 AUGUSTUS CDS 2302752 2303876 1 - 0 ID=LTnewLM_360071300.1:CDS:1;Parent=LTnewLM_360071300.1 ### LTnewLM_36 . polypeptide 2302752 2303876 . - . ID=LTnewLM_360071300.1:pep;Derives_from=LTnewLM_360071300.1;orthologous_to=LmjF.36.5910_mRNA;ortholog_cluster=OG0006658;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2306347 2306832 1 - . ID=LTnewLM_360071400 LTnewLM_36 AUGUSTUS mRNA 2306347 2306832 1 - . ID=LTnewLM_360071400.1;Parent=LTnewLM_360071400 LTnewLM_36 AUGUSTUS CDS 2306347 2306832 1 - 0 ID=LTnewLM_360071400.1:CDS:1;Parent=LTnewLM_360071400.1 ### LTnewLM_36 . polypeptide 2306347 2306832 . - . ID=LTnewLM_360071400.1:pep;Derives_from=LTnewLM_360071400.1;orthologous_to=LmjF.36.5920_mRNA;ortholog_cluster=OG0006659;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2309307 2310185 1 - . ID=LTnewLM_360071500 LTnewLM_36 AUGUSTUS mRNA 2309307 2310185 1 - . ID=LTnewLM_360071500.1;Parent=LTnewLM_360071500 LTnewLM_36 AUGUSTUS CDS 2309307 2310185 1 - 0 ID=LTnewLM_360071500.1:CDS:1;Parent=LTnewLM_360071500.1 ### LTnewLM_36 . polypeptide 2309307 2310185 . - . ID=LTnewLM_360071500.1:pep;Derives_from=LTnewLM_360071500.1;orthologous_to=LmjF.36.5930_mRNA;ortholog_cluster=OG0006660;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2311592 2313466 1 - . ID=LTnewLM_360071600 LTnewLM_36 AUGUSTUS mRNA 2311592 2313466 1 - . ID=LTnewLM_360071600.1;Parent=LTnewLM_360071600 LTnewLM_36 AUGUSTUS CDS 2311592 2313466 1 - 0 ID=LTnewLM_360071600.1:CDS:1;Parent=LTnewLM_360071600.1 ### LTnewLM_36 . polypeptide 2311592 2313466 . - . ID=LTnewLM_360071600.1:pep;Derives_from=LTnewLM_360071600.1;orthologous_to=LmjF.36.5940_mRNA;ortholog_cluster=OG0006661;product=term%3DA distinct subfamily of CDD/CDA-like deaminases%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14421 LTnewLM_36 Pfam protein_match 2311664 2311855 . - . Parent=LTnewLM_360071600.1:pep;Name=PF14421;signature_desc=A distinct subfamily of CDD/CDA-like deaminases LTnewLM_36 Pfam protein_match 2311865 2312230 . - . Parent=LTnewLM_360071600.1:pep;Name=PF14421;signature_desc=A distinct subfamily of CDD/CDA-like deaminases ### LTnewLM_36 AUGUSTUS gene 2315966 2317135 1 - . ID=LTnewLM_360071700 LTnewLM_36 AUGUSTUS mRNA 2315966 2317135 1 - . ID=LTnewLM_360071700.1;Parent=LTnewLM_360071700 LTnewLM_36 AUGUSTUS CDS 2315966 2317135 1 - 0 ID=LTnewLM_360071700.1:CDS:1;Parent=LTnewLM_360071700.1 ### LTnewLM_36 . polypeptide 2315966 2317135 . - . ID=LTnewLM_360071700.1:pep;Derives_from=LTnewLM_360071700.1;orthologous_to=LmjF.36.5950_mRNA;ortholog_cluster=OG0006662;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2324993 2325943 1 - . ID=LTnewLM_360071800 LTnewLM_36 AUGUSTUS mRNA 2324993 2325943 1 - . ID=LTnewLM_360071800.1;Parent=LTnewLM_360071800 LTnewLM_36 AUGUSTUS CDS 2324993 2325943 1 - 0 ID=LTnewLM_360071800.1:CDS:1;Parent=LTnewLM_360071800.1 ### LTnewLM_36 . polypeptide 2324993 2325943 . - . ID=LTnewLM_360071800.1:pep;Derives_from=LTnewLM_360071800.1;orthologous_to=LmjF.36.5960_mRNA;ortholog_cluster=OG0006663;product=term%3DGlycerophosphoryl diester phosphodiesterase family/Domain of unknown function%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03009|Pfam:PF16387;Ontology_term=GO:0008081,GO:0006629 LTnewLM_36 Pfam protein_match 2325017 2325322 . - . Parent=LTnewLM_360071800.1:pep;Name=PF16387;signature_desc=Domain of unknown function LTnewLM_36 Pfam protein_match 2325494 2325763 . - . Parent=LTnewLM_360071800.1:pep;Name=PF03009;signature_desc=Glycerophosphoryl diester phosphodiesterase family;Ontology_term=GO:0008081,GO:0006629 ### LTnewLM_36 AUGUSTUS gene 2328068 2329939 1 - . ID=LTnewLM_360071900 LTnewLM_36 AUGUSTUS mRNA 2328068 2329939 1 - . ID=LTnewLM_360071900.1;Parent=LTnewLM_360071900 LTnewLM_36 AUGUSTUS CDS 2328068 2329939 1 - 0 ID=LTnewLM_360071900.1:CDS:1;Parent=LTnewLM_360071900.1 ### LTnewLM_36 . polypeptide 2328068 2329939 . - . ID=LTnewLM_360071900.1:pep;Derives_from=LTnewLM_360071900.1;orthologous_to=LmjF.36.5970_mRNA;ortholog_cluster=OG0006664;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2331433 2333289 1 - . ID=LTnewLM_360072000 LTnewLM_36 AUGUSTUS mRNA 2331433 2333289 1 - . ID=LTnewLM_360072000.1;Parent=LTnewLM_360072000 LTnewLM_36 AUGUSTUS CDS 2331433 2333289 1 - 0 ID=LTnewLM_360072000.1:CDS:1;Parent=LTnewLM_360072000.1 ### LTnewLM_36 . polypeptide 2331433 2333289 . - . ID=LTnewLM_360072000.1:pep;Derives_from=LTnewLM_360072000.1;orthologous_to=LmjF.36.5980_mRNA;ortholog_cluster=OG0006665;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2334265 2336238 1 - . ID=LTnewLM_360072100 LTnewLM_36 AUGUSTUS mRNA 2334265 2336238 1 - . ID=LTnewLM_360072100.1;Parent=LTnewLM_360072100 LTnewLM_36 AUGUSTUS CDS 2334265 2336238 1 - 0 ID=LTnewLM_360072100.1:CDS:1;Parent=LTnewLM_360072100.1 ### LTnewLM_36 . polypeptide 2334265 2336238 . - . ID=LTnewLM_360072100.1:pep;Derives_from=LTnewLM_360072100.1;orthologous_to=LmjF.36.5990_mRNA;ortholog_cluster=OG0006666;product=term%3DStage V sporulation protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08183 LTnewLM_36 Pfam protein_match 2335783 2335854 . - . Parent=LTnewLM_360072100.1:pep;Name=PF08183;signature_desc=Stage V sporulation protein family ### LTnewLM_36 AUGUSTUS gene 2336791 2339793 1 - . ID=LTnewLM_360072200 LTnewLM_36 AUGUSTUS mRNA 2336791 2339793 1 - . ID=LTnewLM_360072200.1;Parent=LTnewLM_360072200 LTnewLM_36 AUGUSTUS CDS 2336791 2339793 1 - 0 ID=LTnewLM_360072200.1:CDS:1;Parent=LTnewLM_360072200.1 ### LTnewLM_36 . polypeptide 2336791 2339793 . - . ID=LTnewLM_360072200.1:pep;Derives_from=LTnewLM_360072200.1;orthologous_to=LmjF.36.6000_mRNA;ortholog_cluster=OG0006667;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2341203 2343215 1 - . ID=LTnewLM_360072300 LTnewLM_36 AUGUSTUS mRNA 2341203 2343215 1 - . ID=LTnewLM_360072300.1;Parent=LTnewLM_360072300 LTnewLM_36 AUGUSTUS CDS 2341203 2343215 1 - 0 ID=LTnewLM_360072300.1:CDS:1;Parent=LTnewLM_360072300.1 ### LTnewLM_36 . polypeptide 2341203 2343215 . - . ID=LTnewLM_360072300.1:pep;Derives_from=LTnewLM_360072300.1;orthologous_to=LmjF.36.6010_mRNA;ortholog_cluster=OG0006668;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2344311 2345117 1 - . ID=LTnewLM_360072400 LTnewLM_36 AUGUSTUS mRNA 2344311 2345117 1 - . ID=LTnewLM_360072400.1;Parent=LTnewLM_360072400 LTnewLM_36 AUGUSTUS CDS 2344311 2345117 1 - 0 ID=LTnewLM_360072400.1:CDS:1;Parent=LTnewLM_360072400.1 ### LTnewLM_36 . polypeptide 2344311 2345117 . - . ID=LTnewLM_360072400.1:pep;Derives_from=LTnewLM_360072400.1;orthologous_to=LmjF.36.6020_mRNA;ortholog_cluster=OG0006669;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2346225 2353235 1 - . ID=LTnewLM_360072500 LTnewLM_36 AUGUSTUS mRNA 2346225 2353235 1 - . ID=LTnewLM_360072500.1;Parent=LTnewLM_360072500 LTnewLM_36 AUGUSTUS CDS 2346225 2353235 1 - 0 ID=LTnewLM_360072500.1:CDS:1;Parent=LTnewLM_360072500.1 ### LTnewLM_36 . polypeptide 2346225 2353235 . - . ID=LTnewLM_360072500.1:pep;Derives_from=LTnewLM_360072500.1;orthologous_to=LmjF.36.6030_mRNA;ortholog_cluster=OG0006670;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2354363 2357293 1 - . ID=LTnewLM_360072600 LTnewLM_36 AUGUSTUS mRNA 2354363 2357293 1 - . ID=LTnewLM_360072600.1;Parent=LTnewLM_360072600 LTnewLM_36 AUGUSTUS CDS 2354363 2357293 1 - 0 ID=LTnewLM_360072600.1:CDS:1;Parent=LTnewLM_360072600.1 ### LTnewLM_36 . polypeptide 2354363 2357293 . - . ID=LTnewLM_360072600.1:pep;Derives_from=LTnewLM_360072600.1;orthologous_to=LmjF.36.6040_mRNA;ortholog_cluster=OG0006671;product=term%3DCOG (conserved oligomeric Golgi) complex component%2C COG2/COG complex component%2C COG2%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06148|Pfam:PF12022 LTnewLM_36 Pfam protein_match 2354516 2354962 . - . Parent=LTnewLM_360072600.1:pep;Name=PF12022;signature_desc=COG complex component%2C COG2%2C C-terminal LTnewLM_36 Pfam protein_match 2356523 2357065 . - . Parent=LTnewLM_360072600.1:pep;Name=PF06148;signature_desc=COG (conserved oligomeric Golgi) complex component%2C COG2 ### LTnewLM_36 AUGUSTUS gene 2358438 2359433 1 - . ID=LTnewLM_360072700 LTnewLM_36 AUGUSTUS mRNA 2358438 2359433 1 - . ID=LTnewLM_360072700.1;Parent=LTnewLM_360072700 LTnewLM_36 AUGUSTUS CDS 2358438 2359433 1 - 0 ID=LTnewLM_360072700.1:CDS:1;Parent=LTnewLM_360072700.1 ### LTnewLM_36 . polypeptide 2358438 2359433 . - . ID=LTnewLM_360072700.1:pep;Derives_from=LTnewLM_360072700.1;orthologous_to=LmjF.36.6050_mRNA;ortholog_cluster=OG0006672;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2360910 2363207 1 - . ID=LTnewLM_360072800 LTnewLM_36 AUGUSTUS mRNA 2360910 2363207 1 - . ID=LTnewLM_360072800.1;Parent=LTnewLM_360072800 LTnewLM_36 AUGUSTUS CDS 2360910 2363207 1 - 0 ID=LTnewLM_360072800.1:CDS:1;Parent=LTnewLM_360072800.1 ### LTnewLM_36 . polypeptide 2360910 2363207 . - . ID=LTnewLM_360072800.1:pep;Derives_from=LTnewLM_360072800.1;orthologous_to=LmjF.36.6060_mRNA;ortholog_cluster=OG0006673;product=term%3DMIF4G domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02854;Ontology_term=GO:0003723,GO:0005515 LTnewLM_36 Pfam protein_match 2362206 2362958 . - . Parent=LTnewLM_360072800.1:pep;Name=PF02854;signature_desc=MIF4G domain;Ontology_term=GO:0003723,GO:0005515 ### LTnewLM_36 AUGUSTUS gene 2366151 2367833 1 - . ID=LTnewLM_360072900 LTnewLM_36 AUGUSTUS mRNA 2366151 2367833 1 - . ID=LTnewLM_360072900.1;Parent=LTnewLM_360072900 LTnewLM_36 AUGUSTUS CDS 2366151 2367833 1 - 0 ID=LTnewLM_360072900.1:CDS:1;Parent=LTnewLM_360072900.1 ### LTnewLM_36 . polypeptide 2366151 2367833 . - . ID=LTnewLM_360072900.1:pep;Derives_from=LTnewLM_360072900.1;orthologous_to=LmjF.36.6070_mRNA;ortholog_cluster=OG0006674;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_36 Pfam protein_match 2366319 2366948 . - . Parent=LTnewLM_360072900.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_36 Liftoff gene 2369676 2370920 . - . ID=LTnewLM_360073000;coverage=1.0;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6080_0 LTnewLM_36 Liftoff mRNA 2369676 2370920 . - . ID=LTnewLM_360073000.1;Parent=LTnewLM_360073000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2369676 2370920 . - 0 ID=LTnewLM_360073000.1:CDS:1;Parent=LTnewLM_360073000.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2369676 2370920 . - . ID=LTnewLM_360073000.1:pep;Derives_from=LTnewLM_360073000.1;orthologous_to=LmjF.36.6080_mRNA;ortholog_cluster=OG0006675;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_36 Pfam protein_match 2369835 2370458 . - . Parent=LTnewLM_360073000.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_36 AUGUSTUS gene 2373703 2375301 1 - . ID=LTnewLM_360073100 LTnewLM_36 AUGUSTUS mRNA 2373703 2375301 1 - . ID=LTnewLM_360073100.1;Parent=LTnewLM_360073100 LTnewLM_36 AUGUSTUS CDS 2373703 2375301 1 - 0 ID=LTnewLM_360073100.1:CDS:1;Parent=LTnewLM_360073100.1 ### LTnewLM_36 . polypeptide 2373703 2375301 . - . ID=LTnewLM_360073100.1:pep;Derives_from=LTnewLM_360073100.1;orthologous_to=LmjF.36.6090_mRNA;ortholog_cluster=OG0006676;product=term%3DABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03109 LTnewLM_36 Pfam protein_match 2374147 2374887 . - . Parent=LTnewLM_360073100.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_36 AUGUSTUS gene 2378644 2380317 1 - . ID=LTnewLM_360073200 LTnewLM_36 AUGUSTUS mRNA 2378644 2380317 1 - . ID=LTnewLM_360073200.1;Parent=LTnewLM_360073200 LTnewLM_36 AUGUSTUS CDS 2378644 2380317 1 - 0 ID=LTnewLM_360073200.1:CDS:1;Parent=LTnewLM_360073200.1 ### LTnewLM_36 . polypeptide 2378644 2380317 . - . ID=LTnewLM_360073200.1:pep;Derives_from=LTnewLM_360073200.1;orthologous_to=LmjF.36.6100_mRNA;ortholog_cluster=OG0006677;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2381975 2382472 1 - . ID=LTnewLM_360073300 LTnewLM_36 AUGUSTUS mRNA 2381975 2382472 1 - . ID=LTnewLM_360073300.1;Parent=LTnewLM_360073300 LTnewLM_36 AUGUSTUS CDS 2381975 2382472 1 - 0 ID=LTnewLM_360073300.1:CDS:1;Parent=LTnewLM_360073300.1 ### LTnewLM_36 . polypeptide 2381975 2382472 . - . ID=LTnewLM_360073300.1:pep;Derives_from=LTnewLM_360073300.1;orthologous_to=LmjF.36.6110_mRNA;ortholog_cluster=OG0006678;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2384749 2385102 1 - . ID=LTnewLM_360073400 LTnewLM_36 AUGUSTUS mRNA 2384749 2385102 1 - . ID=LTnewLM_360073400.1;Parent=LTnewLM_360073400 LTnewLM_36 AUGUSTUS CDS 2384749 2385102 1 - 0 ID=LTnewLM_360073400.1:CDS:1;Parent=LTnewLM_360073400.1 ### LTnewLM_36 . polypeptide 2384749 2385102 . - . ID=LTnewLM_360073400.1:pep;Derives_from=LTnewLM_360073400.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2385827 2386795 1 - . ID=LTnewLM_360073500 LTnewLM_36 AUGUSTUS mRNA 2385827 2386795 1 - . ID=LTnewLM_360073500.1;Parent=LTnewLM_360073500 LTnewLM_36 AUGUSTUS CDS 2385827 2386795 1 - 0 ID=LTnewLM_360073500.1:CDS:1;Parent=LTnewLM_360073500.1 ### LTnewLM_36 . polypeptide 2385827 2386795 . - . ID=LTnewLM_360073500.1:pep;Derives_from=LTnewLM_360073500.1;orthologous_to=LmjF.36.6120_mRNA;ortholog_cluster=OG0006679;product=term%3DPP-loop family/Zinc-ribbon%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01171|Pfam:PF16503 LTnewLM_36 Pfam protein_match 2385860 2385937 . - . Parent=LTnewLM_360073500.1:pep;Name=PF16503;signature_desc=Zinc-ribbon LTnewLM_36 Pfam protein_match 2386070 2386627 . - . Parent=LTnewLM_360073500.1:pep;Name=PF01171;signature_desc=PP-loop family ### LTnewLM_36 Liftoff gene 2387360 2389219 . - . ID=LTnewLM_360073600;coverage=1.0;sequence_ID=0.922;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6130_0 LTnewLM_36 Liftoff mRNA 2387360 2389219 . - . ID=LTnewLM_360073600.1;Parent=LTnewLM_360073600;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2387360 2389219 . - 0 ID=LTnewLM_360073600.1:CDS:1;Parent=LTnewLM_360073600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2387360 2389219 . - . ID=LTnewLM_360073600.1:pep;Derives_from=LTnewLM_360073600.1;orthologous_to=LmjF.36.6130_mRNA;ortholog_cluster=OG0006680;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Liftoff gene 2389912 2392494 . - . ID=LTnewLM_360073700;coverage=0.998;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6140_0 LTnewLM_36 Liftoff mRNA 2389912 2392494 . - . ID=LTnewLM_360073700.1;Parent=LTnewLM_360073700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2389912 2392494 . - 0 ID=LTnewLM_360073700.1:CDS:1;Parent=LTnewLM_360073700.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2389912 2392494 . - . ID=LTnewLM_360073700.1:pep;Derives_from=LTnewLM_360073700.1;orthologous_to=LmjF.36.6140_mRNA;ortholog_cluster=OG0006681;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2394453 2394980 1 - . ID=LTnewLM_360073800 LTnewLM_36 AUGUSTUS mRNA 2394453 2394980 1 - . ID=LTnewLM_360073800.1;Parent=LTnewLM_360073800 LTnewLM_36 AUGUSTUS CDS 2394453 2394980 1 - 0 ID=LTnewLM_360073800.1:CDS:1;Parent=LTnewLM_360073800.1 ### LTnewLM_36 . polypeptide 2394453 2394980 . - . ID=LTnewLM_360073800.1:pep;Derives_from=LTnewLM_360073800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2396178 2397266 1 - . ID=LTnewLM_360073900 LTnewLM_36 AUGUSTUS mRNA 2396178 2397266 1 - . ID=LTnewLM_360073900.1;Parent=LTnewLM_360073900 LTnewLM_36 AUGUSTUS CDS 2396178 2397266 1 - 0 ID=LTnewLM_360073900.1:CDS:1;Parent=LTnewLM_360073900.1 ### LTnewLM_36 . polypeptide 2396178 2397266 . - . ID=LTnewLM_360073900.1:pep;Derives_from=LTnewLM_360073900.1;orthologous_to=LmjF.36.6150_mRNA;ortholog_cluster=OG0006682;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2398499 2399719 1 - . ID=LTnewLM_360074000 LTnewLM_36 AUGUSTUS mRNA 2398499 2399719 1 - . ID=LTnewLM_360074000.1;Parent=LTnewLM_360074000 LTnewLM_36 AUGUSTUS CDS 2398499 2399719 1 - 0 ID=LTnewLM_360074000.1:CDS:1;Parent=LTnewLM_360074000.1 ### LTnewLM_36 . polypeptide 2398499 2399719 . - . ID=LTnewLM_360074000.1:pep;Derives_from=LTnewLM_360074000.1;orthologous_to=LmjF.36.6160_mRNA;ortholog_cluster=OG0006683;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2401720 2403177 1 - . ID=LTnewLM_360074100 LTnewLM_36 AUGUSTUS mRNA 2401720 2403177 1 - . ID=LTnewLM_360074100.1;Parent=LTnewLM_360074100 LTnewLM_36 AUGUSTUS CDS 2401720 2403177 1 - 0 ID=LTnewLM_360074100.1:CDS:1;Parent=LTnewLM_360074100.1 ### LTnewLM_36 . polypeptide 2401720 2403177 . - . ID=LTnewLM_360074100.1:pep;Derives_from=LTnewLM_360074100.1;orthologous_to=LmjF.36.6170_mRNA;ortholog_cluster=OG0006684;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2405487 2406303 0.6 - . ID=LTnewLM_360074200 LTnewLM_36 AUGUSTUS mRNA 2405487 2406303 0.6 - . ID=LTnewLM_360074200.1;Parent=LTnewLM_360074200 LTnewLM_36 AUGUSTUS CDS 2405487 2405927 0.6 - 0 ID=LTnewLM_360074200.1:CDS:1;Parent=LTnewLM_360074200.1 LTnewLM_36 AUGUSTUS CDS 2405977 2406303 0.6 - 0 ID=LTnewLM_360074200.1:CDS:2;Parent=LTnewLM_360074200.1 ### LTnewLM_36 . polypeptide 2405487 2406303 . - . ID=LTnewLM_360074200.1:pep;Derives_from=LTnewLM_360074200.1;orthologous_to=LmjF.36.6180_mRNA;ortholog_cluster=OG0006685;product=term%3DSucrase/ferredoxin-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06999 LTnewLM_36 Pfam protein_match 2405581 2405928 . - . Parent=LTnewLM_360074200.1:pep;Name=PF06999;signature_desc=Sucrase/ferredoxin-like ### LTnewLM_36 AUGUSTUS gene 2407196 2407753 1 - . ID=LTnewLM_360074300 LTnewLM_36 AUGUSTUS mRNA 2407196 2407753 1 - . ID=LTnewLM_360074300.1;Parent=LTnewLM_360074300 LTnewLM_36 AUGUSTUS CDS 2407196 2407753 1 - 0 ID=LTnewLM_360074300.1:CDS:1;Parent=LTnewLM_360074300.1 ### LTnewLM_36 . polypeptide 2407196 2407753 . - . ID=LTnewLM_360074300.1:pep;Derives_from=LTnewLM_360074300.1;orthologous_to=LmjF.36.6190_mRNA;ortholog_cluster=OG0006686;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 2408598 2409986 . - . ID=LTnewLM_360074400.1:pep;Derives_from=LTnewLM_360074400.1;orthologous_to=LTnewLM_360074400.2,LmjF.36.6200_mRNA;ortholog_cluster=OG0000484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2408598 2411858 1.66 - . ID=LTnewLM_360074400 LTnewLM_36 AUGUSTUS mRNA 2408598 2409986 0.95 - . ID=LTnewLM_360074400.1;Parent=LTnewLM_360074400 LTnewLM_36 AUGUSTUS CDS 2408598 2409986 0.95 - 0 ID=LTnewLM_360074400.1:CDS:1;Parent=LTnewLM_360074400.1 LTnewLM_36 AUGUSTUS mRNA 2408598 2411858 0.71 - . ID=LTnewLM_360074400.2;Parent=LTnewLM_360074400 LTnewLM_36 AUGUSTUS CDS 2408598 2411858 0.71 - 0 ID=LTnewLM_360074400.2:CDS:1;Parent=LTnewLM_360074400.2 ### LTnewLM_36 . polypeptide 2408598 2411858 . - . ID=LTnewLM_360074400.2:pep;Derives_from=LTnewLM_360074400.2;orthologous_to=LTnewLM_360074400.1,LmjF.36.6200_mRNA;ortholog_cluster=OG0000484;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 Liftoff gene 2412563 2416282 . - . ID=LTnewLM_360074500;coverage=1.0;sequence_ID=0.951;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6210_0 LTnewLM_36 Liftoff mRNA 2412563 2416282 . - . ID=LTnewLM_360074500.1;Parent=LTnewLM_360074500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2412563 2416282 . - 0 ID=LTnewLM_360074500.1:CDS:1;Parent=LTnewLM_360074500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2412563 2416282 . - . ID=LTnewLM_360074500.1:pep;Derives_from=LTnewLM_360074500.1;orthologous_to=LmjF.36.6210_mRNA;ortholog_cluster=OG0006687;product=term%3DVps54-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07928;Ontology_term=GO:0042147 LTnewLM_36 Pfam protein_match 2413250 2413522 . - . Parent=LTnewLM_360074500.1:pep;Name=PF07928;signature_desc=Vps54-like protein;Ontology_term=GO:0042147 ### LTnewLM_36 AUGUSTUS gene 2417542 2421933 0.68 - . ID=LTnewLM_360074600 LTnewLM_36 AUGUSTUS mRNA 2417542 2421933 0.68 - . ID=LTnewLM_360074600.1;Parent=LTnewLM_360074600 LTnewLM_36 AUGUSTUS CDS 2417542 2417672 0.68 - 2 ID=LTnewLM_360074600.1:CDS:1;Parent=LTnewLM_360074600.1 LTnewLM_36 AUGUSTUS CDS 2417757 2421933 0.68 - 0 ID=LTnewLM_360074600.1:CDS:2;Parent=LTnewLM_360074600.1 ### LTnewLM_36 . polypeptide 2417542 2421933 . - . ID=LTnewLM_360074600.1:pep;Derives_from=LTnewLM_360074600.1;orthologous_to=LmjF.36.6220_mRNA;ortholog_cluster=OG0006688;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2424356 2424892 1 - . ID=LTnewLM_360074700 LTnewLM_36 AUGUSTUS mRNA 2424356 2424892 1 - . ID=LTnewLM_360074700.1;Parent=LTnewLM_360074700 LTnewLM_36 AUGUSTUS CDS 2424356 2424892 1 - 0 ID=LTnewLM_360074700.1:CDS:1;Parent=LTnewLM_360074700.1 ### LTnewLM_36 . polypeptide 2424356 2424892 . - . ID=LTnewLM_360074700.1:pep;Derives_from=LTnewLM_360074700.1;orthologous_to=LmjF.36.6230_mRNA;ortholog_cluster=OG0006689;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/50S ribosome-binding GTPase/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF01926|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_36 Pfam protein_match 2424365 2424838 . - . Parent=LTnewLM_360074700.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_36 Pfam protein_match 2424371 2424862 . - . Parent=LTnewLM_360074700.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_36 Pfam protein_match 2424470 2424841 . - . Parent=LTnewLM_360074700.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_36 Pfam protein_match 2424482 2424838 . - . Parent=LTnewLM_360074700.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_36 Pfam protein_match 2424512 2424838 . - . Parent=LTnewLM_360074700.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_36 Pfam protein_match 2424518 2424838 . - . Parent=LTnewLM_360074700.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_36 . pseudogene 2425850 2428127 . - . ID=LTnewLM_360074800:pseudogene;coverage=0.999;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6240_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2425850 2428127 . - . ID=LTnewLM_360074800.1;Parent=LTnewLM_360074800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2425850 2428127 . - . ID=LTnewLM_360074800.1:pseudogenic_exon:1;Parent=LTnewLM_360074800.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2425850 2428127 . - . ID=LTnewLM_360074800.1:pep;Derives_from=LTnewLM_360074800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2432494 2433384 1 - . ID=LTnewLM_360074900 LTnewLM_36 AUGUSTUS mRNA 2432494 2433384 1 - . ID=LTnewLM_360074900.1;Parent=LTnewLM_360074900 LTnewLM_36 AUGUSTUS CDS 2432494 2433384 1 - 0 ID=LTnewLM_360074900.1:CDS:1;Parent=LTnewLM_360074900.1 ### LTnewLM_36 . polypeptide 2432494 2433384 . - . ID=LTnewLM_360074900.1:pep;Derives_from=LTnewLM_360074900.1;orthologous_to=LmjF.36.6250_mRNA;ortholog_cluster=OG0006690;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_36 Pfam protein_match 2432878 2433357 . - . Parent=LTnewLM_360074900.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_36 Pfam protein_match 2433013 2433357 . - . Parent=LTnewLM_360074900.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_36 Pfam protein_match 2433088 2433369 . - . Parent=LTnewLM_360074900.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 ### LTnewLM_36 AUGUSTUS gene 2435447 2436808 1 - . ID=LTnewLM_360075000 LTnewLM_36 AUGUSTUS mRNA 2435447 2436808 1 - . ID=LTnewLM_360075000.1;Parent=LTnewLM_360075000 LTnewLM_36 AUGUSTUS CDS 2435447 2436808 1 - 0 ID=LTnewLM_360075000.1:CDS:1;Parent=LTnewLM_360075000.1 ### LTnewLM_36 . polypeptide 2435447 2436808 . - . ID=LTnewLM_360075000.1:pep;Derives_from=LTnewLM_360075000.1;orthologous_to=LTnewLM_140006800.1,LmjF.14.0180_mRNA;ortholog_cluster=OG0000329;product=term%3DCarboxypeptidase Taq (M32) metallopeptidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02074;Ontology_term=GO:0006508,GO:0004181 LTnewLM_36 Pfam protein_match 2435519 2436790 . - . Parent=LTnewLM_360075000.1:pep;Name=PF02074;signature_desc=Carboxypeptidase Taq (M32) metallopeptidase;Ontology_term=GO:0004181,GO:0006508 ### LTnewLM_36 AUGUSTUS gene 2437746 2438783 1 - . ID=LTnewLM_360075100 LTnewLM_36 AUGUSTUS mRNA 2437746 2438783 1 - . ID=LTnewLM_360075100.1;Parent=LTnewLM_360075100 LTnewLM_36 AUGUSTUS CDS 2437746 2438783 1 - 0 ID=LTnewLM_360075100.1:CDS:1;Parent=LTnewLM_360075100.1 ### LTnewLM_36 . polypeptide 2437746 2438783 . - . ID=LTnewLM_360075100.1:pep;Derives_from=LTnewLM_360075100.1;orthologous_to=LmjF.34.0040_mRNA,LmjF.36.6270_mRNA;ortholog_cluster=OG0000485;product=term%3DDnaJ domain/DnaJ C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556 LTnewLM_36 Pfam protein_match 2437800 2438264 . - . Parent=LTnewLM_360075100.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_36 Pfam protein_match 2438586 2438774 . - . Parent=LTnewLM_360075100.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_36 AUGUSTUS gene 2445500 2447206 1 - . ID=LTnewLM_360075200 LTnewLM_36 AUGUSTUS mRNA 2445500 2447206 1 - . ID=LTnewLM_360075200.1;Parent=LTnewLM_360075200 LTnewLM_36 AUGUSTUS CDS 2445500 2447206 1 - 0 ID=LTnewLM_360075200.1:CDS:1;Parent=LTnewLM_360075200.1 ### LTnewLM_36 . polypeptide 2445500 2447206 . - . ID=LTnewLM_360075200.1:pep;Derives_from=LTnewLM_360075200.1;orthologous_to=LTnewLM_360075300.1,LTnewLM_360075400.1,LmjF.36.6280_mRNA,LmjF.36.6290_mRNA,LmjF.36.6300_mRNA;ortholog_cluster=OG0000073;product=term%3DSugar (and other) transporter/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083|Pfam:PF07690;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_36 Pfam protein_match 2445599 2446198 . - . Parent=LTnewLM_360075200.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2445755 2446753 . - . Parent=LTnewLM_360075200.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2446271 2447071 . - . Parent=LTnewLM_360075200.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2449057 2450760 1 - . ID=LTnewLM_360075300 LTnewLM_36 AUGUSTUS mRNA 2449057 2450760 1 - . ID=LTnewLM_360075300.1;Parent=LTnewLM_360075300 LTnewLM_36 AUGUSTUS CDS 2449057 2450760 1 - 0 ID=LTnewLM_360075300.1:CDS:1;Parent=LTnewLM_360075300.1 ### LTnewLM_36 . polypeptide 2449057 2450760 . - . ID=LTnewLM_360075300.1:pep;Derives_from=LTnewLM_360075300.1;orthologous_to=LTnewLM_360075200.1,LTnewLM_360075400.1,LmjF.36.6280_mRNA,LmjF.36.6290_mRNA,LmjF.36.6300_mRNA;ortholog_cluster=OG0000073;product=term%3DSugar (and other) transporter/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083|Pfam:PF07690;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_36 Pfam protein_match 2449156 2449755 . - . Parent=LTnewLM_360075300.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2449312 2450310 . - . Parent=LTnewLM_360075300.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2449828 2450628 . - . Parent=LTnewLM_360075300.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2452611 2454572 1 - . ID=LTnewLM_360075400 LTnewLM_36 AUGUSTUS mRNA 2452611 2454572 1 - . ID=LTnewLM_360075400.1;Parent=LTnewLM_360075400 LTnewLM_36 AUGUSTUS CDS 2452611 2454572 1 - 0 ID=LTnewLM_360075400.1:CDS:1;Parent=LTnewLM_360075400.1 ### LTnewLM_36 . polypeptide 2452611 2454572 . - . ID=LTnewLM_360075400.1:pep;Derives_from=LTnewLM_360075400.1;orthologous_to=LTnewLM_360075200.1,LTnewLM_360075300.1,LmjF.36.6280_mRNA,LmjF.36.6290_mRNA,LmjF.36.6300_mRNA;ortholog_cluster=OG0000073;product=term%3DSugar (and other) transporter/Major Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00083|Pfam:PF07690;Ontology_term=GO:0055085,GO:0016021,GO:0022857 LTnewLM_36 Pfam protein_match 2452707 2453309 . - . Parent=LTnewLM_360075400.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2452866 2453864 . - . Parent=LTnewLM_360075400.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 LTnewLM_36 Pfam protein_match 2453382 2454182 . - . Parent=LTnewLM_360075400.1:pep;Name=PF00083;signature_desc=Sugar (and other) transporter;Ontology_term=GO:0022857,GO:0055085,GO:0016021 ### LTnewLM_36 AUGUSTUS gene 2455635 2456597 0.91 - . ID=LTnewLM_360075500 LTnewLM_36 AUGUSTUS mRNA 2455635 2456597 0.91 - . ID=LTnewLM_360075500.1;Parent=LTnewLM_360075500 LTnewLM_36 AUGUSTUS CDS 2455635 2456597 0.91 - 0 ID=LTnewLM_360075500.1:CDS:1;Parent=LTnewLM_360075500.1 ### LTnewLM_36 . polypeptide 2455635 2456597 . - . ID=LTnewLM_360075500.1:pep;Derives_from=LTnewLM_360075500.1;orthologous_to=LmjF.36.6310_mRNA;ortholog_cluster=OG0006691;product=term%3DHomocysteine S-methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02574;Ontology_term=GO:0008898 LTnewLM_36 Pfam protein_match 2455665 2456561 . - . Parent=LTnewLM_360075500.1:pep;Name=PF02574;signature_desc=Homocysteine S-methyltransferase;Ontology_term=GO:0008898 ### LTnewLM_36 AUGUSTUS gene 2457518 2465359 1 - . ID=LTnewLM_360075600 LTnewLM_36 AUGUSTUS mRNA 2457518 2465359 1 - . ID=LTnewLM_360075600.1;Parent=LTnewLM_360075600 LTnewLM_36 AUGUSTUS CDS 2457518 2465359 1 - 0 ID=LTnewLM_360075600.1:CDS:1;Parent=LTnewLM_360075600.1 ### LTnewLM_36 . polypeptide 2457518 2465359 . - . ID=LTnewLM_360075600.1:pep;Derives_from=LTnewLM_360075600.1;orthologous_to=LmjF.36.6320_mRNA;ortholog_cluster=OG0006692;product=term%3DDomain of unknown function (DUF3385)/FAT domain/FKBP12-rapamycin binding domain/Phosphatidylinositol 3- and 4-kinase/FATC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11865|Pfam:PF02259|Pfam:PF08771|Pfam:PF00454|Pfam:PF02260;Ontology_term=GO:0005515,GO:0016773,GO:0008144 LTnewLM_36 Pfam protein_match 2457524 2457613 . - . Parent=LTnewLM_360075600.1:pep;Name=PF02260;signature_desc=FATC domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2458142 2458882 . - . Parent=LTnewLM_360075600.1:pep;Name=PF00454;signature_desc=Phosphatidylinositol 3- and 4-kinase;Ontology_term=GO:0016773 LTnewLM_36 Pfam protein_match 2459096 2459383 . - . Parent=LTnewLM_360075600.1:pep;Name=PF08771;signature_desc=FKBP12-rapamycin binding domain;Ontology_term=GO:0008144 LTnewLM_36 Pfam protein_match 2459753 2460748 . - . Parent=LTnewLM_360075600.1:pep;Name=PF02259;signature_desc=FAT domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2462447 2462917 . - . Parent=LTnewLM_360075600.1:pep;Name=PF11865;signature_desc=Domain of unknown function (DUF3385) ### LTnewLM_36 AUGUSTUS gene 2475792 2476628 1 - . ID=LTnewLM_360075700 LTnewLM_36 AUGUSTUS mRNA 2475792 2476628 1 - . ID=LTnewLM_360075700.1;Parent=LTnewLM_360075700 LTnewLM_36 AUGUSTUS CDS 2475792 2476628 1 - 0 ID=LTnewLM_360075700.1:CDS:1;Parent=LTnewLM_360075700.1 ### LTnewLM_36 . polypeptide 2475792 2476628 . - . ID=LTnewLM_360075700.1:pep;Derives_from=LTnewLM_360075700.1;orthologous_to=LmjF.36.6330_mRNA;ortholog_cluster=OG0006693;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2478225 2490719 1 - . ID=LTnewLM_360075800 LTnewLM_36 AUGUSTUS mRNA 2478225 2490719 1 - . ID=LTnewLM_360075800.1;Parent=LTnewLM_360075800 LTnewLM_36 AUGUSTUS CDS 2478225 2490719 1 - 0 ID=LTnewLM_360075800.1:CDS:1;Parent=LTnewLM_360075800.1 ### LTnewLM_36 . polypeptide 2478225 2490719 . - . ID=LTnewLM_360075800.1:pep;Derives_from=LTnewLM_360075800.1;orthologous_to=LmjF.36.6340_mRNA;ortholog_cluster=OG0006694;product=term%3DConcanavalin A-like lectin/glucanases superfamily/SPRY domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13385|Pfam:PF00622|Pfam:PF00632;Ontology_term=GO:0004842,GO:0005515 LTnewLM_36 Pfam protein_match 2478336 2479283 . - . Parent=LTnewLM_360075800.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 LTnewLM_36 Pfam protein_match 2480124 2480519 . - . Parent=LTnewLM_360075800.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2485647 2485988 . - . Parent=LTnewLM_360075800.1:pep;Name=PF00622;signature_desc=SPRY domain;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2489004 2489429 . - . Parent=LTnewLM_360075800.1:pep;Name=PF13385;signature_desc=Concanavalin A-like lectin/glucanases superfamily ### LTnewLM_36 . polypeptide 2491513 2492097 . - . ID=LTnewLM_360075900.1:pep;Derives_from=LTnewLM_360075900.1;orthologous_to=LmjF.36.6345.1_mRNA;ortholog_cluster=OG0007699;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 . polypeptide 2491513 2492240 . - . ID=LTnewLM_360075900.2:pep;Derives_from=LTnewLM_360075900.2;product=term%3Dhypothetical protein ### LTnewLM_36 . pseudogene 2491513 2493043 . - . ID=LTnewLM_360075900:pseudogene;coverage=0.997;sequence_ID=0.942;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6345_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2491513 2492137 . - . ID=LTnewLM_360075900.1;Parent=LTnewLM_360075900:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2491513 2492097 . - . ID=LTnewLM_360075900.1:pseudogenic_exon:1;Parent=LTnewLM_360075900.1;extra_copy_number=0 LTnewLM_36 . pseudogenic_transcript 2491513 2493043 . - . ID=LTnewLM_360075900.2;Parent=LTnewLM_360075900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2491513 2492240 . - . ID=LTnewLM_360075900.2:pseudogenic_exon:1;Parent=LTnewLM_360075900.2;extra_copy_number=0 ### LTnewLM_36 AUGUSTUS gene 2493337 2493909 1 - . ID=LTnewLM_360076000 LTnewLM_36 AUGUSTUS mRNA 2493337 2493909 1 - . ID=LTnewLM_360076000.1;Parent=LTnewLM_360076000 LTnewLM_36 AUGUSTUS CDS 2493337 2493909 1 - 0 ID=LTnewLM_360076000.1:CDS:1;Parent=LTnewLM_360076000.1 ### LTnewLM_36 . polypeptide 2493337 2493909 . - . ID=LTnewLM_360076000.1:pep;Derives_from=LTnewLM_360076000.1;orthologous_to=LmjF.36.6347_mRNA;ortholog_cluster=OG0006695;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2495073 2495378 1 - . ID=LTnewLM_360076100 LTnewLM_36 AUGUSTUS mRNA 2495073 2495378 1 - . ID=LTnewLM_360076100.1;Parent=LTnewLM_360076100 LTnewLM_36 AUGUSTUS CDS 2495073 2495378 1 - 0 ID=LTnewLM_360076100.1:CDS:1;Parent=LTnewLM_360076100.1 ### LTnewLM_36 . polypeptide 2495073 2495378 . - . ID=LTnewLM_360076100.1:pep;Derives_from=LTnewLM_360076100.1;orthologous_to=LTnewLM_260022800.1;ortholog_cluster=OG0003121;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2497006 2498538 1 - . ID=LTnewLM_360076200 LTnewLM_36 AUGUSTUS mRNA 2497006 2498538 1 - . ID=LTnewLM_360076200.1;Parent=LTnewLM_360076200 LTnewLM_36 AUGUSTUS CDS 2497006 2498538 1 - 0 ID=LTnewLM_360076200.1:CDS:1;Parent=LTnewLM_360076200.1 ### LTnewLM_36 . polypeptide 2497006 2498538 . - . ID=LTnewLM_360076200.1:pep;Derives_from=LTnewLM_360076200.1;orthologous_to=LmjF.36.6350_mRNA;ortholog_cluster=OG0006696;product=term%3DCAF1 family ribonuclease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04857;Ontology_term=GO:0005634 LTnewLM_36 Pfam protein_match 2497438 2498532 . - . Parent=LTnewLM_360076200.1:pep;Name=PF04857;signature_desc=CAF1 family ribonuclease;Ontology_term=GO:0005634 ### LTnewLM_36 Aragorn_1.2.36 gene 2499116 2499187 . + . ID=LTnewLM_360076300 LTnewLM_36 Aragorn_1.2.36 tRNA 2499116 2499187 . + . ID=LTnewLM_360076300:tRNA;Parent=LTnewLM_360076300;aa=Cys;anticodon=gca;gc_content=58.3 ### LTnewLM_36 Aragorn_1.2.36 gene 2499976 2500057 . - . ID=LTnewLM_360076400 LTnewLM_36 Aragorn_1.2.36 tRNA 2499976 2500057 . - . ID=LTnewLM_360076400:tRNA;Parent=LTnewLM_360076400;aa=Leu;anticodon=aag;gc_content=51.2 ### LTnewLM_36 Aragorn_1.2.36 gene 2500120 2500191 . - . ID=LTnewLM_360076500 LTnewLM_36 Aragorn_1.2.36 tRNA 2500120 2500191 . - . ID=LTnewLM_360076500:tRNA;Parent=LTnewLM_360076500;aa=Met;anticodon=cat;gc_content=55.6 ### LTnewLM_36 Aragorn_1.2.36 gene 2500265 2500336 . + . ID=LTnewLM_360076600 LTnewLM_36 Aragorn_1.2.36 tRNA 2500265 2500336 . + . ID=LTnewLM_360076600:tRNA;Parent=LTnewLM_360076600;aa=Pro;anticodon=tgg;gc_content=51.4 ### LTnewLM_36 . polypeptide 2500629 2501423 . - . ID=LTnewLM_360076700.1:pep;Derives_from=LTnewLM_360076700.1;orthologous_to=LmjF.36.6360.2_mRNA;ortholog_cluster=OG0007700;product=term%3DTranslation machinery-associated protein 16%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11176 LTnewLM_36 Pfam protein_match 2500950 2501384 . - . Parent=LTnewLM_360076700.1:pep;Name=PF11176;signature_desc=Translation machinery-associated protein 16 ### LTnewLM_36 . polypeptide 2500629 2501611 . - . ID=LTnewLM_360076700.2:pep;Derives_from=LTnewLM_360076700.2;product=term%3Dhypothetical protein ### LTnewLM_36 . pseudogene 2500629 2504178 . - . ID=LTnewLM_360076700:pseudogene;coverage=0.983;sequence_ID=0.889;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6360_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2500629 2501429 . - . ID=LTnewLM_360076700.1;Parent=LTnewLM_360076700:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2500629 2501423 . - . ID=LTnewLM_360076700.1:pseudogenic_exon:1;Parent=LTnewLM_360076700.1;extra_copy_number=0 LTnewLM_36 . pseudogenic_transcript 2500629 2504178 . - . ID=LTnewLM_360076700.2;Parent=LTnewLM_360076700:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2500629 2501611 . - . ID=LTnewLM_360076700.2:pseudogenic_exon:1;Parent=LTnewLM_360076700.2;extra_copy_number=0 ### LTnewLM_36 AUGUSTUS gene 2504684 2506357 1 - . ID=LTnewLM_360076800 LTnewLM_36 AUGUSTUS mRNA 2504684 2506357 1 - . ID=LTnewLM_360076800.1;Parent=LTnewLM_360076800 LTnewLM_36 AUGUSTUS CDS 2504684 2506357 1 - 0 ID=LTnewLM_360076800.1:CDS:1;Parent=LTnewLM_360076800.1 ### LTnewLM_36 . polypeptide 2504684 2506357 . - . ID=LTnewLM_360076800.1:pep;Derives_from=LTnewLM_360076800.1;orthologous_to=LmjF.36.6370_mRNA;ortholog_cluster=OG0006697;product=term%3DRab-GTPase-TBC domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00566;Ontology_term=GO:0005097,GO:0032313 LTnewLM_36 Pfam protein_match 2505014 2505499 . - . Parent=LTnewLM_360076800.1:pep;Name=PF00566;signature_desc=Rab-GTPase-TBC domain;Ontology_term=GO:0005097,GO:0032313 ### LTnewLM_36 AUGUSTUS gene 2507245 2509470 1 - . ID=LTnewLM_360076900 LTnewLM_36 AUGUSTUS mRNA 2507245 2509470 1 - . ID=LTnewLM_360076900.1;Parent=LTnewLM_360076900 LTnewLM_36 AUGUSTUS CDS 2507245 2509470 1 - 0 ID=LTnewLM_360076900.1:CDS:1;Parent=LTnewLM_360076900.1 ### LTnewLM_36 . polypeptide 2507245 2509470 . - . ID=LTnewLM_360076900.1:pep;Derives_from=LTnewLM_360076900.1;orthologous_to=LmjF.36.6380_mRNA;ortholog_cluster=OG0006698;product=term%3DDM10 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06565 LTnewLM_36 Pfam protein_match 2507947 2508219 . - . Parent=LTnewLM_360076900.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_36 Pfam protein_match 2508421 2508744 . - . Parent=LTnewLM_360076900.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_36 Pfam protein_match 2508949 2509245 . - . Parent=LTnewLM_360076900.1:pep;Name=PF06565;signature_desc=DM10 domain ### LTnewLM_36 AUGUSTUS gene 2510803 2511732 1 - . ID=LTnewLM_360077000 LTnewLM_36 AUGUSTUS mRNA 2510803 2511732 1 - . ID=LTnewLM_360077000.1;Parent=LTnewLM_360077000 LTnewLM_36 AUGUSTUS CDS 2510803 2511732 1 - 0 ID=LTnewLM_360077000.1:CDS:1;Parent=LTnewLM_360077000.1 ### LTnewLM_36 . polypeptide 2510803 2511732 . - . ID=LTnewLM_360077000.1:pep;Derives_from=LTnewLM_360077000.1;orthologous_to=LmjF.36.6390_mRNA;ortholog_cluster=OG0006699;product=term%3DMethylenetetrahydrofolate reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02219;Ontology_term=GO:0004489,GO:0006555,GO:0055114 LTnewLM_36 Pfam protein_match 2510824 2511690 . - . Parent=LTnewLM_360077000.1:pep;Name=PF02219;signature_desc=Methylenetetrahydrofolate reductase;Ontology_term=GO:0004489,GO:0006555,GO:0055114 ### LTnewLM_36 AUGUSTUS gene 2513145 2513927 1 - . ID=LTnewLM_360077100 LTnewLM_36 AUGUSTUS mRNA 2513145 2513927 1 - . ID=LTnewLM_360077100.1;Parent=LTnewLM_360077100 LTnewLM_36 AUGUSTUS CDS 2513145 2513927 1 - 0 ID=LTnewLM_360077100.1:CDS:1;Parent=LTnewLM_360077100.1 ### LTnewLM_36 . polypeptide 2513145 2513927 . - . ID=LTnewLM_360077100.1:pep;Derives_from=LTnewLM_360077100.1;orthologous_to=LmjF.36.6400_mRNA;ortholog_cluster=OG0006700;product=term%3DRibosomal protein S8e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01201 LTnewLM_36 Pfam protein_match 2513154 2513819 . - . Parent=LTnewLM_360077100.1:pep;Name=PF01201;signature_desc=Ribosomal protein S8e ### LTnewLM_36 AUGUSTUS gene 2514708 2515160 1 - . ID=LTnewLM_360077200 LTnewLM_36 AUGUSTUS mRNA 2514708 2515160 1 - . ID=LTnewLM_360077200.1;Parent=LTnewLM_360077200 LTnewLM_36 AUGUSTUS CDS 2514708 2515160 1 - 0 ID=LTnewLM_360077200.1:CDS:1;Parent=LTnewLM_360077200.1 ### LTnewLM_36 . polypeptide 2514708 2515160 . - . ID=LTnewLM_360077200.1:pep;Derives_from=LTnewLM_360077200.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2516081 2517679 1 - . ID=LTnewLM_360077300 LTnewLM_36 AUGUSTUS mRNA 2516081 2517679 1 - . ID=LTnewLM_360077300.1;Parent=LTnewLM_360077300 LTnewLM_36 AUGUSTUS CDS 2516081 2517679 1 - 0 ID=LTnewLM_360077300.1:CDS:1;Parent=LTnewLM_360077300.1 ### LTnewLM_36 . polypeptide 2516081 2517679 . - . ID=LTnewLM_360077300.1:pep;Derives_from=LTnewLM_360077300.1;orthologous_to=LmjF.36.6410_mRNA;ortholog_cluster=OG0006701;product=term%3DCCDC81 eukaryotic HU domain 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18289 LTnewLM_36 Pfam protein_match 2517152 2517340 . - . Parent=LTnewLM_360077300.1:pep;Name=PF18289;signature_desc=CCDC81 eukaryotic HU domain 2 ### LTnewLM_36 AUGUSTUS gene 2518674 2519294 1 - . ID=LTnewLM_360077400 LTnewLM_36 AUGUSTUS mRNA 2518674 2519294 1 - . ID=LTnewLM_360077400.1;Parent=LTnewLM_360077400 LTnewLM_36 AUGUSTUS CDS 2518674 2519294 1 - 0 ID=LTnewLM_360077400.1:CDS:1;Parent=LTnewLM_360077400.1 ### LTnewLM_36 . polypeptide 2518674 2519294 . - . ID=LTnewLM_360077400.1:pep;Derives_from=LTnewLM_360077400.1;orthologous_to=LmjF.36.6420_mRNA;ortholog_cluster=OG0006702;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2520522 2523074 1 - . ID=LTnewLM_360077500 LTnewLM_36 AUGUSTUS mRNA 2520522 2523074 1 - . ID=LTnewLM_360077500.1;Parent=LTnewLM_360077500 LTnewLM_36 AUGUSTUS CDS 2520522 2523074 1 - 0 ID=LTnewLM_360077500.1:CDS:1;Parent=LTnewLM_360077500.1 ### LTnewLM_36 . polypeptide 2520522 2523074 . - . ID=LTnewLM_360077500.1:pep;Derives_from=LTnewLM_360077500.1;orthologous_to=LmjF.36.6430_mRNA;ortholog_cluster=OG0006703;product=term%3DSec23/Sec24 zinc finger/Sec23/Sec24 trunk domain/Sec23/Sec24 beta-sandwich domain/Sec23/Sec24 helical domain/Gelsolin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04810|Pfam:PF04811|Pfam:PF08033|Pfam:PF04815|Pfam:PF00626;Ontology_term=GO:0008270,GO:0030127,GO:0006886,GO:0006888 LTnewLM_36 Pfam protein_match 2520690 2520926 . - . Parent=LTnewLM_360077500.1:pep;Name=PF00626;signature_desc=Gelsolin repeat LTnewLM_36 Pfam protein_match 2520975 2521268 . - . Parent=LTnewLM_360077500.1:pep;Name=PF04815;signature_desc=Sec23/Sec24 helical domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_36 Pfam protein_match 2521314 2521613 . - . Parent=LTnewLM_360077500.1:pep;Name=PF08033;signature_desc=Sec23/Sec24 beta-sandwich domain LTnewLM_36 Pfam protein_match 2521677 2522390 . - . Parent=LTnewLM_360077500.1:pep;Name=PF04811;signature_desc=Sec23/Sec24 trunk domain;Ontology_term=GO:0006886,GO:0006888,GO:0030127 LTnewLM_36 Pfam protein_match 2522481 2522591 . - . Parent=LTnewLM_360077500.1:pep;Name=PF04810;signature_desc=Sec23/Sec24 zinc finger;Ontology_term=GO:0008270,GO:0006886,GO:0006888,GO:0030127 ### LTnewLM_36 AUGUSTUS gene 2524313 2525239 1 - . ID=LTnewLM_360077600 LTnewLM_36 AUGUSTUS mRNA 2524313 2525239 1 - . ID=LTnewLM_360077600.1;Parent=LTnewLM_360077600 LTnewLM_36 AUGUSTUS CDS 2524313 2525239 1 - 0 ID=LTnewLM_360077600.1:CDS:1;Parent=LTnewLM_360077600.1 ### LTnewLM_36 . polypeptide 2524313 2525239 . - . ID=LTnewLM_360077600.1:pep;Derives_from=LTnewLM_360077600.1;orthologous_to=LmjF.36.6440_mRNA;ortholog_cluster=OG0006704;product=term%3DCID domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04818 LTnewLM_36 Pfam protein_match 2524862 2525194 . - . Parent=LTnewLM_360077600.1:pep;Name=PF04818;signature_desc=CID domain ### LTnewLM_36 AUGUSTUS gene 2525727 2526320 1 - . ID=LTnewLM_360077700 LTnewLM_36 AUGUSTUS mRNA 2525727 2526320 1 - . ID=LTnewLM_360077700.1;Parent=LTnewLM_360077700 LTnewLM_36 AUGUSTUS CDS 2525727 2526320 1 - 0 ID=LTnewLM_360077700.1:CDS:1;Parent=LTnewLM_360077700.1 ### LTnewLM_36 . polypeptide 2525727 2526320 . - . ID=LTnewLM_360077700.1:pep;Derives_from=LTnewLM_360077700.1;orthologous_to=LmjF.36.6450_mRNA;ortholog_cluster=OG0006705;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2527749 2528696 1 - . ID=LTnewLM_360077800 LTnewLM_36 AUGUSTUS mRNA 2527749 2528696 1 - . ID=LTnewLM_360077800.1;Parent=LTnewLM_360077800 LTnewLM_36 AUGUSTUS CDS 2527749 2528696 1 - 0 ID=LTnewLM_360077800.1:CDS:1;Parent=LTnewLM_360077800.1 ### LTnewLM_36 . polypeptide 2527749 2528696 . - . ID=LTnewLM_360077800.1:pep;Derives_from=LTnewLM_360077800.1;orthologous_to=LTnewLM_360078100.1,LmjF.36.6460_mRNA,LmjF.36.6480_mRNA;ortholog_cluster=OG0000265;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_36 Pfam protein_match 2528322 2528525 . - . Parent=LTnewLM_360077800.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_36 AUGUSTUS gene 2529539 2530789 1 - . ID=LTnewLM_360077900 LTnewLM_36 AUGUSTUS mRNA 2529539 2530789 1 - . ID=LTnewLM_360077900.1;Parent=LTnewLM_360077900 LTnewLM_36 AUGUSTUS CDS 2529539 2530789 1 - 0 ID=LTnewLM_360077900.1:CDS:1;Parent=LTnewLM_360077900.1 ### LTnewLM_36 . polypeptide 2529539 2530789 . - . ID=LTnewLM_360077900.1:pep;Derives_from=LTnewLM_360077900.1;orthologous_to=LmjF.36.6465_mRNA;ortholog_cluster=OG0006706;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2532338 2533414 1 - . ID=LTnewLM_360078000 LTnewLM_36 AUGUSTUS mRNA 2532338 2533414 1 - . ID=LTnewLM_360078000.1;Parent=LTnewLM_360078000 LTnewLM_36 AUGUSTUS CDS 2532338 2533414 1 - 0 ID=LTnewLM_360078000.1:CDS:1;Parent=LTnewLM_360078000.1 ### LTnewLM_36 . polypeptide 2532338 2533414 . - . ID=LTnewLM_360078000.1:pep;Derives_from=LTnewLM_360078000.1;orthologous_to=LmjF.36.6470_mRNA;ortholog_cluster=OG0006707;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Lipopolysaccharide kinase (Kdo/WaaP) family/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF06293|Pfam:PF14531;Ontology_term=GO:0016773,GO:0005524,GO:0004672,GO:0016020,GO:0006468,GO:0009103 LTnewLM_36 Pfam protein_match 2532503 2533375 . - . Parent=LTnewLM_360078000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_36 Pfam protein_match 2532767 2533369 . - . Parent=LTnewLM_360078000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_36 Pfam protein_match 2532791 2533174 . - . Parent=LTnewLM_360078000.1:pep;Name=PF14531;signature_desc=Kinase-like LTnewLM_36 Pfam protein_match 2532971 2533246 . - . Parent=LTnewLM_360078000.1:pep;Name=PF06293;signature_desc=Lipopolysaccharide kinase (Kdo/WaaP) family;Ontology_term=GO:0005524,GO:0016773,GO:0009103,GO:0016020 ### LTnewLM_36 . pseudogene 2540615 2541976 709 - . ID=LTnewLM_360078100:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.36.2570:mRNA 13 473;original_prot_length=515 LTnewLM_36 . pseudogenic_transcript 2540615 2541976 . - . ID=LTnewLM_360078100.1;Parent=LTnewLM_360078100:pseudogene LTnewLM_36 . pseudogenic_exon 2540615 2541976 . - . ID=LTnewLM_360078100.1:pseudogenic_exon:1;Parent=LTnewLM_360078100.1 ### LTnewLM_36 . polypeptide 2540615 2541976 . - . ID=LTnewLM_360078100.1:pep;Derives_from=LTnewLM_360078100.1;orthologous_to=LTnewLM_360077800.1,LmjF.36.6460_mRNA,LmjF.36.6480_mRNA;ortholog_cluster=OG0000265;product=term%3DHistidine phosphatase superfamily (branch 2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00328;Ontology_term=GO:0003993 LTnewLM_36 Pfam protein_match 2541626 2541829 . - . Parent=LTnewLM_360078100.1:pep;Name=PF00328;signature_desc=Histidine phosphatase superfamily (branch 2);Ontology_term=GO:0003993 ### LTnewLM_36 AUGUSTUS gene 2542720 2543697 1 - . ID=LTnewLM_360078200 LTnewLM_36 AUGUSTUS mRNA 2542720 2543697 1 - . ID=LTnewLM_360078200.1;Parent=LTnewLM_360078200 LTnewLM_36 AUGUSTUS CDS 2542720 2543697 1 - 0 ID=LTnewLM_360078200.1:CDS:1;Parent=LTnewLM_360078200.1 ### LTnewLM_36 . polypeptide 2542720 2543697 . - . ID=LTnewLM_360078200.1:pep;Derives_from=LTnewLM_360078200.1;orthologous_to=LmjF.36.6490_mRNA;ortholog_cluster=OG0006708;product=term%3DUbiquitin fusion degradation protein UFD1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03152;Ontology_term=GO:0006511 LTnewLM_36 Pfam protein_match 2543137 2543673 . - . Parent=LTnewLM_360078200.1:pep;Name=PF03152;signature_desc=Ubiquitin fusion degradation protein UFD1;Ontology_term=GO:0006511 ### LTnewLM_36 AUGUSTUS gene 2545429 2545831 0.56 - . ID=LTnewLM_360078300 LTnewLM_36 AUGUSTUS mRNA 2545429 2545831 0.56 - . ID=LTnewLM_360078300.1;Parent=LTnewLM_360078300 LTnewLM_36 AUGUSTUS CDS 2545429 2545644 0.69 - 0 ID=LTnewLM_360078300.1:CDS:1;Parent=LTnewLM_360078300.1 LTnewLM_36 AUGUSTUS CDS 2545757 2545831 0.73 - 0 ID=LTnewLM_360078300.1:CDS:2;Parent=LTnewLM_360078300.1 ### LTnewLM_36 . polypeptide 2545429 2545831 . - . ID=LTnewLM_360078300.1:pep;Derives_from=LTnewLM_360078300.1;product=term%3Dhypothetical protein ### LTnewLM_36 Liftoff gene 2547881 2549923 . - . ID=LTnewLM_360078400;coverage=0.994;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6500_0 LTnewLM_36 Liftoff mRNA 2547881 2549923 . - . ID=LTnewLM_360078400.1;Parent=LTnewLM_360078400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2547881 2549923 . - 0 ID=LTnewLM_360078400.1:CDS:1;Parent=LTnewLM_360078400.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2547881 2549923 . - . ID=LTnewLM_360078400.1:pep;Derives_from=LTnewLM_360078400.1;orthologous_to=LmjF.36.6500_mRNA;ortholog_cluster=OG0006709;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2551113 2552312 1 - . ID=LTnewLM_360078500 LTnewLM_36 AUGUSTUS mRNA 2551113 2552312 1 - . ID=LTnewLM_360078500.1;Parent=LTnewLM_360078500 LTnewLM_36 AUGUSTUS CDS 2551113 2552312 1 - 0 ID=LTnewLM_360078500.1:CDS:1;Parent=LTnewLM_360078500.1 ### LTnewLM_36 . polypeptide 2551113 2552312 . - . ID=LTnewLM_360078500.1:pep;Derives_from=LTnewLM_360078500.1;orthologous_to=LmjF.36.6510_mRNA;ortholog_cluster=OG0006710;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2553084 2555249 1 - . ID=LTnewLM_360078600 LTnewLM_36 AUGUSTUS mRNA 2553084 2555249 1 - . ID=LTnewLM_360078600.1;Parent=LTnewLM_360078600 LTnewLM_36 AUGUSTUS CDS 2553084 2555249 1 - 0 ID=LTnewLM_360078600.1:CDS:1;Parent=LTnewLM_360078600.1 ### LTnewLM_36 . polypeptide 2553084 2555249 . - . ID=LTnewLM_360078600.1:pep;Derives_from=LTnewLM_360078600.1;orthologous_to=LmjF.36.6520_mRNA;ortholog_cluster=OG0006711;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2557109 2557540 1 - . ID=LTnewLM_360078700 LTnewLM_36 AUGUSTUS mRNA 2557109 2557540 1 - . ID=LTnewLM_360078700.1;Parent=LTnewLM_360078700 LTnewLM_36 AUGUSTUS CDS 2557109 2557540 1 - 0 ID=LTnewLM_360078700.1:CDS:1;Parent=LTnewLM_360078700.1 ### LTnewLM_36 . polypeptide 2557109 2557540 . - . ID=LTnewLM_360078700.1:pep;Derives_from=LTnewLM_360078700.1;orthologous_to=LmjF.36.6523_mRNA;ortholog_cluster=OG0006712;product=term%3DTMEM128 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF20479 LTnewLM_36 Pfam protein_match 2557181 2557498 . - . Parent=LTnewLM_360078700.1:pep;Name=PF20479;signature_desc=TMEM128 protein ### LTnewLM_36 AUGUSTUS gene 2558437 2560209 1 - . ID=LTnewLM_360078800 LTnewLM_36 AUGUSTUS mRNA 2558437 2560209 1 - . ID=LTnewLM_360078800.1;Parent=LTnewLM_360078800 LTnewLM_36 AUGUSTUS CDS 2558437 2560209 1 - 0 ID=LTnewLM_360078800.1:CDS:1;Parent=LTnewLM_360078800.1 ### LTnewLM_36 . polypeptide 2558437 2560209 . - . ID=LTnewLM_360078800.1:pep;Derives_from=LTnewLM_360078800.1;orthologous_to=LmjF.36.6525_mRNA;ortholog_cluster=OG0006713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2561631 2562824 1 - . ID=LTnewLM_360078900 LTnewLM_36 AUGUSTUS mRNA 2561631 2562824 1 - . ID=LTnewLM_360078900.1;Parent=LTnewLM_360078900 LTnewLM_36 AUGUSTUS CDS 2561631 2562824 1 - 0 ID=LTnewLM_360078900.1:CDS:1;Parent=LTnewLM_360078900.1 ### LTnewLM_36 . polypeptide 2561631 2562824 . - . ID=LTnewLM_360078900.1:pep;Derives_from=LTnewLM_360078900.1;orthologous_to=LmjF.36.6530_mRNA;ortholog_cluster=OG0006714;product=term%3DMyb DNA-binding like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15963 LTnewLM_36 Pfam protein_match 2562060 2562305 . - . Parent=LTnewLM_360078900.1:pep;Name=PF15963;signature_desc=Myb DNA-binding like ### LTnewLM_36 AUGUSTUS gene 2565032 2565754 1 - . ID=LTnewLM_360079000 LTnewLM_36 AUGUSTUS mRNA 2565032 2565754 1 - . ID=LTnewLM_360079000.1;Parent=LTnewLM_360079000 LTnewLM_36 AUGUSTUS CDS 2565032 2565754 1 - 0 ID=LTnewLM_360079000.1:CDS:1;Parent=LTnewLM_360079000.1 ### LTnewLM_36 . polypeptide 2565032 2565754 . - . ID=LTnewLM_360079000.1:pep;Derives_from=LTnewLM_360079000.1;orthologous_to=LmjF.36.6540_mRNA;ortholog_cluster=OG0006715;product=term%3DDienelactone hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01738;Ontology_term=GO:0016787 LTnewLM_36 Pfam protein_match 2565047 2565670 . - . Parent=LTnewLM_360079000.1:pep;Name=PF01738;signature_desc=Dienelactone hydrolase family;Ontology_term=GO:0016787 ### LTnewLM_36 AUGUSTUS gene 2567602 2568381 1 - . ID=LTnewLM_360079100 LTnewLM_36 AUGUSTUS mRNA 2567602 2568381 1 - . ID=LTnewLM_360079100.1;Parent=LTnewLM_360079100 LTnewLM_36 AUGUSTUS CDS 2567602 2568381 1 - 0 ID=LTnewLM_360079100.1:CDS:1;Parent=LTnewLM_360079100.1 ### LTnewLM_36 . polypeptide 2567602 2568381 . - . ID=LTnewLM_360079100.1:pep;Derives_from=LTnewLM_360079100.1;orthologous_to=LmjF.36.6550_mRNA;ortholog_cluster=OG0006716;product=term%3DProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01135;Ontology_term=GO:0006464,GO:0004719 LTnewLM_36 Pfam protein_match 2567644 2568354 . - . Parent=LTnewLM_360079100.1:pep;Name=PF01135;signature_desc=Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);Ontology_term=GO:0004719,GO:0006464 ### LTnewLM_36 AUGUSTUS gene 2570689 2571663 1 - . ID=LTnewLM_360079200 LTnewLM_36 AUGUSTUS mRNA 2570689 2571663 1 - . ID=LTnewLM_360079200.1;Parent=LTnewLM_360079200 LTnewLM_36 AUGUSTUS CDS 2570689 2571663 1 - 0 ID=LTnewLM_360079200.1:CDS:1;Parent=LTnewLM_360079200.1 ### LTnewLM_36 . polypeptide 2570689 2571663 . - . ID=LTnewLM_360079200.1:pep;Derives_from=LTnewLM_360079200.1;orthologous_to=LmjF.36.6560_mRNA;ortholog_cluster=OG0006717;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_36 Pfam protein_match 2571412 2571585 . - . Parent=LTnewLM_360079200.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_36 AUGUSTUS gene 2575083 2576171 1 - . ID=LTnewLM_360079300 LTnewLM_36 AUGUSTUS mRNA 2575083 2576171 1 - . ID=LTnewLM_360079300.1;Parent=LTnewLM_360079300 LTnewLM_36 AUGUSTUS CDS 2575083 2576171 1 - 0 ID=LTnewLM_360079300.1:CDS:1;Parent=LTnewLM_360079300.1 ### LTnewLM_36 . polypeptide 2575083 2576171 . - . ID=LTnewLM_360079300.1:pep;Derives_from=LTnewLM_360079300.1;orthologous_to=LmjF.36.6570_mRNA;ortholog_cluster=OG0006718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2576995 2577576 1 - . ID=LTnewLM_360079400 LTnewLM_36 AUGUSTUS mRNA 2576995 2577576 1 - . ID=LTnewLM_360079400.1;Parent=LTnewLM_360079400 LTnewLM_36 AUGUSTUS CDS 2576995 2577576 1 - 0 ID=LTnewLM_360079400.1:CDS:1;Parent=LTnewLM_360079400.1 ### LTnewLM_36 . polypeptide 2576995 2577576 . - . ID=LTnewLM_360079400.1:pep;Derives_from=LTnewLM_360079400.1;orthologous_to=LmjF.36.6580_mRNA;ortholog_cluster=OG0006719;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2578825 2580771 1 - . ID=LTnewLM_360079500 LTnewLM_36 AUGUSTUS mRNA 2578825 2580771 1 - . ID=LTnewLM_360079500.1;Parent=LTnewLM_360079500 LTnewLM_36 AUGUSTUS CDS 2578825 2580771 1 - 0 ID=LTnewLM_360079500.1:CDS:1;Parent=LTnewLM_360079500.1 ### LTnewLM_36 . polypeptide 2578825 2580771 . - . ID=LTnewLM_360079500.1:pep;Derives_from=LTnewLM_360079500.1;orthologous_to=LmjF.36.6590_mRNA;ortholog_cluster=OG0006720;product=term%3DSperm tail/Sperm tail C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14772|Pfam:PF14775 LTnewLM_36 Pfam protein_match 2578909 2579085 . - . Parent=LTnewLM_360079500.1:pep;Name=PF14775;signature_desc=Sperm tail C-terminal domain LTnewLM_36 Pfam protein_match 2580259 2580555 . - . Parent=LTnewLM_360079500.1:pep;Name=PF14772;signature_desc=Sperm tail ### LTnewLM_36 AUGUSTUS gene 2583228 2585483 1 - . ID=LTnewLM_360079600 LTnewLM_36 AUGUSTUS mRNA 2583228 2585483 1 - . ID=LTnewLM_360079600.1;Parent=LTnewLM_360079600 LTnewLM_36 AUGUSTUS CDS 2583228 2585483 1 - 0 ID=LTnewLM_360079600.1:CDS:1;Parent=LTnewLM_360079600.1 ### LTnewLM_36 . polypeptide 2583228 2585483 . - . ID=LTnewLM_360079600.1:pep;Derives_from=LTnewLM_360079600.1;orthologous_to=LmjF.36.6600_mRNA;ortholog_cluster=OG0006721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2588652 2589761 1 - . ID=LTnewLM_360079700 LTnewLM_36 AUGUSTUS mRNA 2588652 2589761 1 - . ID=LTnewLM_360079700.1;Parent=LTnewLM_360079700 LTnewLM_36 AUGUSTUS CDS 2588652 2589761 1 - 0 ID=LTnewLM_360079700.1:CDS:1;Parent=LTnewLM_360079700.1 ### LTnewLM_36 . polypeptide 2588652 2589761 . - . ID=LTnewLM_360079700.1:pep;Derives_from=LTnewLM_360079700.1;orthologous_to=LmjF.36.6610_mRNA;ortholog_cluster=OG0006722;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_36 Pfam protein_match 2588718 2588975 . - . Parent=LTnewLM_360079700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 2589072 2589335 . - . Parent=LTnewLM_360079700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 2589357 2589557 . - . Parent=LTnewLM_360079700.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_36 AUGUSTUS gene 2591630 2592856 1 - . ID=LTnewLM_360079800 LTnewLM_36 AUGUSTUS mRNA 2591630 2592856 1 - . ID=LTnewLM_360079800.1;Parent=LTnewLM_360079800 LTnewLM_36 AUGUSTUS CDS 2591630 2592856 1 - 0 ID=LTnewLM_360079800.1:CDS:1;Parent=LTnewLM_360079800.1 ### LTnewLM_36 . polypeptide 2591630 2592856 . - . ID=LTnewLM_360079800.1:pep;Derives_from=LTnewLM_360079800.1;orthologous_to=LmjF.36.6620_mRNA;ortholog_cluster=OG0006723;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2593775 2594338 1 - . ID=LTnewLM_360079900 LTnewLM_36 AUGUSTUS mRNA 2593775 2594338 1 - . ID=LTnewLM_360079900.1;Parent=LTnewLM_360079900 LTnewLM_36 AUGUSTUS CDS 2593775 2594338 1 - 0 ID=LTnewLM_360079900.1:CDS:1;Parent=LTnewLM_360079900.1 ### LTnewLM_36 . polypeptide 2593775 2594338 . - . ID=LTnewLM_360079900.1:pep;Derives_from=LTnewLM_360079900.1;orthologous_to=LmjF.36.6630_mRNA;ortholog_cluster=OG0006724;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2596081 2596674 1 - . ID=LTnewLM_360080000 LTnewLM_36 AUGUSTUS mRNA 2596081 2596674 1 - . ID=LTnewLM_360080000.1;Parent=LTnewLM_360080000 LTnewLM_36 AUGUSTUS CDS 2596081 2596674 1 - 0 ID=LTnewLM_360080000.1:CDS:1;Parent=LTnewLM_360080000.1 ### LTnewLM_36 . polypeptide 2596081 2596674 . - . ID=LTnewLM_360080000.1:pep;Derives_from=LTnewLM_360080000.1;orthologous_to=LmjF.36.6640_mRNA;ortholog_cluster=OG0006725;product=term%3DCentriolar protein SAS N-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16531 LTnewLM_36 Pfam protein_match 2596201 2596467 . - . Parent=LTnewLM_360080000.1:pep;Name=PF16531;signature_desc=Centriolar protein SAS N-terminal ### LTnewLM_36 AUGUSTUS gene 2597867 2598148 1 - . ID=LTnewLM_360080100 LTnewLM_36 AUGUSTUS mRNA 2597867 2598148 1 - . ID=LTnewLM_360080100.1;Parent=LTnewLM_360080100 LTnewLM_36 AUGUSTUS CDS 2597867 2598148 1 - 0 ID=LTnewLM_360080100.1:CDS:1;Parent=LTnewLM_360080100.1 ### LTnewLM_36 . polypeptide 2597867 2598148 . - . ID=LTnewLM_360080100.1:pep;Derives_from=LTnewLM_360080100.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2599927 2601588 1 - . ID=LTnewLM_360080200 LTnewLM_36 AUGUSTUS mRNA 2599927 2601588 1 - . ID=LTnewLM_360080200.1;Parent=LTnewLM_360080200 LTnewLM_36 AUGUSTUS CDS 2599927 2601588 1 - 0 ID=LTnewLM_360080200.1:CDS:1;Parent=LTnewLM_360080200.1 ### LTnewLM_36 . polypeptide 2599927 2601588 . - . ID=LTnewLM_360080200.1:pep;Derives_from=LTnewLM_360080200.1;orthologous_to=LmjF.36.6650_mRNA;ortholog_cluster=OG0006726;product=term%3DMetalloenzyme superfamily/BPG-independent PGAM N-terminus (iPGM_N)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01676|Pfam:PF06415;Ontology_term=GO:0003824,GO:0030145,GO:0004619,GO:0006007,GO:0046872,GO:0005737 LTnewLM_36 Pfam protein_match 2599972 2601543 . - . Parent=LTnewLM_360080200.1:pep;Name=PF01676;signature_desc=Metalloenzyme superfamily;Ontology_term=GO:0003824,GO:0046872 LTnewLM_36 Pfam protein_match 2600638 2601306 . - . Parent=LTnewLM_360080200.1:pep;Name=PF06415;signature_desc=BPG-independent PGAM N-terminus (iPGM_N);Ontology_term=GO:0004619,GO:0030145,GO:0006007,GO:0005737 ### LTnewLM_36 AUGUSTUS gene 2603045 2604247 1 - . ID=LTnewLM_360080300 LTnewLM_36 AUGUSTUS mRNA 2603045 2604247 1 - . ID=LTnewLM_360080300.1;Parent=LTnewLM_360080300 LTnewLM_36 AUGUSTUS CDS 2603045 2604247 1 - 0 ID=LTnewLM_360080300.1:CDS:1;Parent=LTnewLM_360080300.1 ### LTnewLM_36 . polypeptide 2603045 2604247 . - . ID=LTnewLM_360080300.1:pep;Derives_from=LTnewLM_360080300.1;orthologous_to=LmjF.36.6660_mRNA;ortholog_cluster=OG0006727;product=term%3DFtsJ-like methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01728;Ontology_term=GO:0032259,GO:0008168 LTnewLM_36 Pfam protein_match 2603357 2603986 . - . Parent=LTnewLM_360080300.1:pep;Name=PF01728;signature_desc=FtsJ-like methyltransferase;Ontology_term=GO:0008168,GO:0032259 ### LTnewLM_36 AUGUSTUS gene 2605709 2606149 1 - . ID=LTnewLM_360080400 LTnewLM_36 AUGUSTUS mRNA 2605709 2606149 1 - . ID=LTnewLM_360080400.1;Parent=LTnewLM_360080400 LTnewLM_36 AUGUSTUS CDS 2605709 2606149 1 - 0 ID=LTnewLM_360080400.1:CDS:1;Parent=LTnewLM_360080400.1 ### LTnewLM_36 . polypeptide 2605709 2606149 . - . ID=LTnewLM_360080400.1:pep;Derives_from=LTnewLM_360080400.1;orthologous_to=LmjF.36.6670_mRNA;ortholog_cluster=OG0006728;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_36 Pfam protein_match 2605817 2606038 . - . Parent=LTnewLM_360080400.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_36 AUGUSTUS gene 2607372 2607860 1 - . ID=LTnewLM_360080500 LTnewLM_36 AUGUSTUS mRNA 2607372 2607860 1 - . ID=LTnewLM_360080500.1;Parent=LTnewLM_360080500 LTnewLM_36 AUGUSTUS CDS 2607372 2607860 1 - 0 ID=LTnewLM_360080500.1:CDS:1;Parent=LTnewLM_360080500.1 ### LTnewLM_36 . polypeptide 2607372 2607860 . - . ID=LTnewLM_360080500.1:pep;Derives_from=LTnewLM_360080500.1;orthologous_to=LmjF.36.6680_mRNA;ortholog_cluster=OG0006729;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2609195 2610313 1 - . ID=LTnewLM_360080600 LTnewLM_36 AUGUSTUS mRNA 2609195 2610313 1 - . ID=LTnewLM_360080600.1;Parent=LTnewLM_360080600 LTnewLM_36 AUGUSTUS CDS 2609195 2610313 1 - 0 ID=LTnewLM_360080600.1:CDS:1;Parent=LTnewLM_360080600.1 ### LTnewLM_36 . polypeptide 2609195 2610313 . - . ID=LTnewLM_360080600.1:pep;Derives_from=LTnewLM_360080600.1;orthologous_to=LmjF.36.6690_mRNA;ortholog_cluster=OG0006730;product=term%3DOrganic solute transporter Ostalpha%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03619 LTnewLM_36 Pfam protein_match 2609369 2610163 . - . Parent=LTnewLM_360080600.1:pep;Name=PF03619;signature_desc=Organic solute transporter Ostalpha ### LTnewLM_36 AUGUSTUS gene 2611608 2613029 1 - . ID=LTnewLM_360080700 LTnewLM_36 AUGUSTUS mRNA 2611608 2613029 1 - . ID=LTnewLM_360080700.1;Parent=LTnewLM_360080700 LTnewLM_36 AUGUSTUS CDS 2611608 2613029 1 - 0 ID=LTnewLM_360080700.1:CDS:1;Parent=LTnewLM_360080700.1 ### LTnewLM_36 . polypeptide 2611608 2613029 . - . ID=LTnewLM_360080700.1:pep;Derives_from=LTnewLM_360080700.1;orthologous_to=LmjF.36.6700_mRNA;ortholog_cluster=OG0006731;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2613911 2614168 1 - . ID=LTnewLM_360080800 LTnewLM_36 AUGUSTUS mRNA 2613911 2614168 1 - . ID=LTnewLM_360080800.1;Parent=LTnewLM_360080800 LTnewLM_36 AUGUSTUS CDS 2613911 2614168 1 - 0 ID=LTnewLM_360080800.1:CDS:1;Parent=LTnewLM_360080800.1 ### LTnewLM_36 . polypeptide 2613911 2614168 . - . ID=LTnewLM_360080800.1:pep;Derives_from=LTnewLM_360080800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2614825 2615880 1 - . ID=LTnewLM_360080900 LTnewLM_36 AUGUSTUS mRNA 2614825 2615880 1 - . ID=LTnewLM_360080900.1;Parent=LTnewLM_360080900 LTnewLM_36 AUGUSTUS CDS 2614825 2615880 1 - 0 ID=LTnewLM_360080900.1:CDS:1;Parent=LTnewLM_360080900.1 ### LTnewLM_36 . polypeptide 2614825 2615880 . - . ID=LTnewLM_360080900.1:pep;Derives_from=LTnewLM_360080900.1;orthologous_to=LmjF.36.6710_mRNA;ortholog_cluster=OG0006732;product=term%3DDNA polymerase III%2C delta subunit/ATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13177|Pfam:PF00004;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 2615320 2615808 . - . Parent=LTnewLM_360080900.1:pep;Name=PF13177;signature_desc=DNA polymerase III%2C delta subunit LTnewLM_36 Pfam protein_match 2615335 2615772 . - . Parent=LTnewLM_360080900.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_36 AUGUSTUS gene 2617748 2618665 0.47 - . ID=LTnewLM_360081000 LTnewLM_36 AUGUSTUS mRNA 2617748 2618665 0.47 - . ID=LTnewLM_360081000.1;Parent=LTnewLM_360081000 LTnewLM_36 AUGUSTUS CDS 2617748 2618467 0.5 - 0 ID=LTnewLM_360081000.1:CDS:1;Parent=LTnewLM_360081000.1 LTnewLM_36 AUGUSTUS CDS 2618522 2618665 0.91 - 0 ID=LTnewLM_360081000.1:CDS:2;Parent=LTnewLM_360081000.1 ### LTnewLM_36 . polypeptide 2617748 2618665 . - . ID=LTnewLM_360081000.1:pep;Derives_from=LTnewLM_360081000.1;orthologous_to=LmjF.36.6720_mRNA;ortholog_cluster=OG0006733;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_36 Pfam protein_match 2617823 2618068 . - . Parent=LTnewLM_360081000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_36 Pfam protein_match 2618111 2618371 . - . Parent=LTnewLM_360081000.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_36 AUGUSTUS gene 2619900 2623985 1 - . ID=LTnewLM_360081100 LTnewLM_36 AUGUSTUS mRNA 2619900 2623985 1 - . ID=LTnewLM_360081100.1;Parent=LTnewLM_360081100 LTnewLM_36 AUGUSTUS CDS 2619900 2623985 1 - 0 ID=LTnewLM_360081100.1:CDS:1;Parent=LTnewLM_360081100.1 ### LTnewLM_36 . polypeptide 2619900 2623985 . - . ID=LTnewLM_360081100.1:pep;Derives_from=LTnewLM_360081100.1;orthologous_to=LmjF.36.6730_mRNA;ortholog_cluster=OG0006734;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2624734 2625555 1 - . ID=LTnewLM_360081200 LTnewLM_36 AUGUSTUS mRNA 2624734 2625555 1 - . ID=LTnewLM_360081200.1;Parent=LTnewLM_360081200 LTnewLM_36 AUGUSTUS CDS 2624734 2625555 1 - 0 ID=LTnewLM_360081200.1:CDS:1;Parent=LTnewLM_360081200.1 ### LTnewLM_36 . polypeptide 2624734 2625555 . - . ID=LTnewLM_360081200.1:pep;Derives_from=LTnewLM_360081200.1;orthologous_to=LmjF.36.6740_mRNA;ortholog_cluster=OG0006735;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2628291 2630384 1 - . ID=LTnewLM_360081300 LTnewLM_36 AUGUSTUS mRNA 2628291 2630384 1 - . ID=LTnewLM_360081300.1;Parent=LTnewLM_360081300 LTnewLM_36 AUGUSTUS CDS 2628291 2630384 1 - 0 ID=LTnewLM_360081300.1:CDS:1;Parent=LTnewLM_360081300.1 ### LTnewLM_36 . polypeptide 2628291 2630384 . - . ID=LTnewLM_360081300.1:pep;Derives_from=LTnewLM_360081300.1;orthologous_to=LmjF.36.6750_mRNA;ortholog_cluster=OG0006736;product=term%3DProlyl oligopeptidase%2C N-terminal beta-propeller domain/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02897|Pfam:PF00326;Ontology_term=GO:0006508,GO:0004252,GO:0070008,GO:0008236 LTnewLM_36 Pfam protein_match 2628312 2628959 . - . Parent=LTnewLM_360081300.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 LTnewLM_36 Pfam protein_match 2629149 2630369 . - . Parent=LTnewLM_360081300.1:pep;Name=PF02897;signature_desc=Prolyl oligopeptidase%2C N-terminal beta-propeller domain;Ontology_term=GO:0004252,GO:0070008 ### LTnewLM_36 AUGUSTUS gene 2631642 2632418 1 - . ID=LTnewLM_360081400 LTnewLM_36 AUGUSTUS mRNA 2631642 2632418 1 - . ID=LTnewLM_360081400.1;Parent=LTnewLM_360081400 LTnewLM_36 AUGUSTUS CDS 2631642 2632418 1 - 0 ID=LTnewLM_360081400.1:CDS:1;Parent=LTnewLM_360081400.1 ### LTnewLM_36 . polypeptide 2631642 2632418 . - . ID=LTnewLM_360081400.1:pep;Derives_from=LTnewLM_360081400.1;orthologous_to=LmjF.36.6760_mRNA;ortholog_cluster=OG0006737;product=term%3DATP synthase delta (OSCP) subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00213;Ontology_term=GO:0015986,GO:0046933 LTnewLM_36 Pfam protein_match 2631822 2632274 . - . Parent=LTnewLM_360081400.1:pep;Name=PF00213;signature_desc=ATP synthase delta (OSCP) subunit;Ontology_term=GO:0046933,GO:0015986 ### LTnewLM_36 AUGUSTUS gene 2634163 2636403 1 - . ID=LTnewLM_360081500 LTnewLM_36 AUGUSTUS mRNA 2634163 2636403 1 - . ID=LTnewLM_360081500.1;Parent=LTnewLM_360081500 LTnewLM_36 AUGUSTUS CDS 2634163 2636403 1 - 0 ID=LTnewLM_360081500.1:CDS:1;Parent=LTnewLM_360081500.1 ### LTnewLM_36 . polypeptide 2634163 2636403 . - . ID=LTnewLM_360081500.1:pep;Derives_from=LTnewLM_360081500.1;orthologous_to=LTnewLM_360068000.1,LmjF.36.6770_mRNA;ortholog_cluster=OG0000483;product=term%3DAdaptin N terminal region/HEAT repeats/non-SMC mitotic condensation complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF13646|Pfam:PF12717;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_36 Pfam protein_match 2634769 2636304 . - . Parent=LTnewLM_360081500.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_36 Pfam protein_match 2635567 2636046 . - . Parent=LTnewLM_360081500.1:pep;Name=PF12717;signature_desc=non-SMC mitotic condensation complex subunit 1 LTnewLM_36 Pfam protein_match 2635807 2636082 . - . Parent=LTnewLM_360081500.1:pep;Name=PF13646;signature_desc=HEAT repeats ### LTnewLM_36 AUGUSTUS gene 2645914 2646792 1 - . ID=LTnewLM_360081600 LTnewLM_36 AUGUSTUS mRNA 2645914 2646792 1 - . ID=LTnewLM_360081600.1;Parent=LTnewLM_360081600 LTnewLM_36 AUGUSTUS CDS 2645914 2646792 1 - 0 ID=LTnewLM_360081600.1:CDS:1;Parent=LTnewLM_360081600.1 ### LTnewLM_36 . polypeptide 2645914 2646792 . - . ID=LTnewLM_360081600.1:pep;Derives_from=LTnewLM_360081600.1;orthologous_to=LmjF.36.6780_mRNA;ortholog_cluster=OG0006738;product=term%3DNLI interacting factor-like phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03031;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2646211 2646615 . - . Parent=LTnewLM_360081600.1:pep;Name=PF03031;signature_desc=NLI interacting factor-like phosphatase;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 2652287 2653882 1 - . ID=LTnewLM_360081700 LTnewLM_36 AUGUSTUS mRNA 2652287 2653882 1 - . ID=LTnewLM_360081700.1;Parent=LTnewLM_360081700 LTnewLM_36 AUGUSTUS CDS 2652287 2653882 1 - 0 ID=LTnewLM_360081700.1:CDS:1;Parent=LTnewLM_360081700.1 ### LTnewLM_36 . polypeptide 2652287 2653882 . - . ID=LTnewLM_360081700.1:pep;Derives_from=LTnewLM_360081700.1;orthologous_to=LmjF.36.6790_mRNA;ortholog_cluster=OG0006739;product=term%3DAFG1-like ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03969;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 2652602 2653510 . - . Parent=LTnewLM_360081700.1:pep;Name=PF03969;signature_desc=AFG1-like ATPase;Ontology_term=GO:0005524 ### LTnewLM_36 AUGUSTUS gene 2654876 2657089 1 - . ID=LTnewLM_360081800 LTnewLM_36 AUGUSTUS mRNA 2654876 2657089 1 - . ID=LTnewLM_360081800.1;Parent=LTnewLM_360081800 LTnewLM_36 AUGUSTUS CDS 2654876 2657089 1 - 0 ID=LTnewLM_360081800.1:CDS:1;Parent=LTnewLM_360081800.1 ### LTnewLM_36 . polypeptide 2654876 2657089 . - . ID=LTnewLM_360081800.1:pep;Derives_from=LTnewLM_360081800.1;orthologous_to=LmjF.36.6800_mRNA;ortholog_cluster=OG0006740;product=term%3DE3 UFM1-protein ligase 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09743 LTnewLM_36 Pfam protein_match 2656271 2657077 . - . Parent=LTnewLM_360081800.1:pep;Name=PF09743;signature_desc=E3 UFM1-protein ligase 1 ### LTnewLM_36 AUGUSTUS gene 2657765 2658244 1 - . ID=LTnewLM_360081900 LTnewLM_36 AUGUSTUS mRNA 2657765 2658244 1 - . ID=LTnewLM_360081900.1;Parent=LTnewLM_360081900 LTnewLM_36 AUGUSTUS CDS 2657765 2658244 1 - 0 ID=LTnewLM_360081900.1:CDS:1;Parent=LTnewLM_360081900.1 ### LTnewLM_36 . polypeptide 2657765 2658244 . - . ID=LTnewLM_360081900.1:pep;Derives_from=LTnewLM_360081900.1;orthologous_to=LmjF.36.6810_mRNA;ortholog_cluster=OG0006741;product=term%3DThioesterase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03061 LTnewLM_36 Pfam protein_match 2657822 2658040 . - . Parent=LTnewLM_360081900.1:pep;Name=PF03061;signature_desc=Thioesterase superfamily ### LTnewLM_36 AUGUSTUS gene 2658988 2660061 1 - . ID=LTnewLM_360082000 LTnewLM_36 AUGUSTUS mRNA 2658988 2660061 1 - . ID=LTnewLM_360082000.1;Parent=LTnewLM_360082000 LTnewLM_36 AUGUSTUS CDS 2658988 2660061 1 - 0 ID=LTnewLM_360082000.1:CDS:1;Parent=LTnewLM_360082000.1 ### LTnewLM_36 . polypeptide 2658988 2660061 . - . ID=LTnewLM_360082000.1:pep;Derives_from=LTnewLM_360082000.1;orthologous_to=LmjF.36.6820_mRNA;ortholog_cluster=OG0006742;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2661447 2662877 1 - . ID=LTnewLM_360082100 LTnewLM_36 AUGUSTUS mRNA 2661447 2662877 1 - . ID=LTnewLM_360082100.1;Parent=LTnewLM_360082100 LTnewLM_36 AUGUSTUS CDS 2661447 2662877 1 - 0 ID=LTnewLM_360082100.1:CDS:1;Parent=LTnewLM_360082100.1 ### LTnewLM_36 . polypeptide 2661447 2662877 . - . ID=LTnewLM_360082100.1:pep;Derives_from=LTnewLM_360082100.1;orthologous_to=LmjF.36.6830_mRNA;ortholog_cluster=OG0006743;product=term%3DTransmembrane amino acid transporter protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490 LTnewLM_36 Pfam protein_match 2661462 2662676 . - . Parent=LTnewLM_360082100.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein ### LTnewLM_36 AUGUSTUS gene 2663994 2665103 1 - . ID=LTnewLM_360082200 LTnewLM_36 AUGUSTUS mRNA 2663994 2665103 1 - . ID=LTnewLM_360082200.1;Parent=LTnewLM_360082200 LTnewLM_36 AUGUSTUS CDS 2663994 2665103 1 - 0 ID=LTnewLM_360082200.1:CDS:1;Parent=LTnewLM_360082200.1 ### LTnewLM_36 . polypeptide 2663994 2665103 . - . ID=LTnewLM_360082200.1:pep;Derives_from=LTnewLM_360082200.1;orthologous_to=LmjF.36.6840_mRNA;ortholog_cluster=OG0006744;product=term%3DTransmembrane protein 65%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10507 LTnewLM_36 Pfam protein_match 2664231 2664548 . - . Parent=LTnewLM_360082200.1:pep;Name=PF10507;signature_desc=Transmembrane protein 65 ### LTnewLM_36 AUGUSTUS gene 2666113 2666346 1 - . ID=LTnewLM_360082300 LTnewLM_36 AUGUSTUS mRNA 2666113 2666346 1 - . ID=LTnewLM_360082300.1;Parent=LTnewLM_360082300 LTnewLM_36 AUGUSTUS CDS 2666113 2666346 1 - 0 ID=LTnewLM_360082300.1:CDS:1;Parent=LTnewLM_360082300.1 ### LTnewLM_36 . polypeptide 2666113 2666346 . - . ID=LTnewLM_360082300.1:pep;Derives_from=LTnewLM_360082300.1;orthologous_to=LmjF.36.6844_mRNA;ortholog_cluster=OG0006745;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2666932 2669649 1 - . ID=LTnewLM_360082400 LTnewLM_36 AUGUSTUS mRNA 2666932 2669649 1 - . ID=LTnewLM_360082400.1;Parent=LTnewLM_360082400 LTnewLM_36 AUGUSTUS CDS 2666932 2669649 1 - 0 ID=LTnewLM_360082400.1:CDS:1;Parent=LTnewLM_360082400.1 ### LTnewLM_36 . polypeptide 2666932 2669649 . - . ID=LTnewLM_360082400.1:pep;Derives_from=LTnewLM_360082400.1;orthologous_to=LmjF.36.6850_mRNA;ortholog_cluster=OG0006746;product=term%3DRNA ligase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09511|Pfam:PF13671 LTnewLM_36 Pfam protein_match 2668003 2668458 . - . Parent=LTnewLM_360082400.1:pep;Name=PF13671;signature_desc=AAA domain LTnewLM_36 Pfam protein_match 2668750 2669445 . - . Parent=LTnewLM_360082400.1:pep;Name=PF09511;signature_desc=RNA ligase ### LTnewLM_36 Liftoff gene 2670292 2672196 . - . ID=LTnewLM_360082500;coverage=1.0;sequence_ID=0.918;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.36.6860_0 LTnewLM_36 Liftoff mRNA 2670292 2672196 . - . ID=LTnewLM_360082500.1;Parent=LTnewLM_360082500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2670292 2672196 . - 0 ID=LTnewLM_360082500.1:CDS:1;Parent=LTnewLM_360082500.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2670292 2672196 . - . ID=LTnewLM_360082500.1:pep;Derives_from=LTnewLM_360082500.1;orthologous_to=LmjF.36.6860_mRNA;ortholog_cluster=OG0006747;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2672619 2673233 1 - . ID=LTnewLM_360082600 LTnewLM_36 AUGUSTUS mRNA 2672619 2673233 1 - . ID=LTnewLM_360082600.1;Parent=LTnewLM_360082600 LTnewLM_36 AUGUSTUS CDS 2672619 2673233 1 - 0 ID=LTnewLM_360082600.1:CDS:1;Parent=LTnewLM_360082600.1 ### LTnewLM_36 . polypeptide 2672619 2673233 . - . ID=LTnewLM_360082600.1:pep;Derives_from=LTnewLM_360082600.1;orthologous_to=LmjF.36.6870_mRNA;ortholog_cluster=OG0006748;product=term%3DEVE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01878 LTnewLM_36 Pfam protein_match 2672766 2673197 . - . Parent=LTnewLM_360082600.1:pep;Name=PF01878;signature_desc=EVE domain ### LTnewLM_36 AUGUSTUS gene 2673720 2674580 1 - . ID=LTnewLM_360082700 LTnewLM_36 AUGUSTUS mRNA 2673720 2674580 1 - . ID=LTnewLM_360082700.1;Parent=LTnewLM_360082700 LTnewLM_36 AUGUSTUS CDS 2673720 2674580 1 - 0 ID=LTnewLM_360082700.1:CDS:1;Parent=LTnewLM_360082700.1 ### LTnewLM_36 . polypeptide 2673720 2674580 . - . ID=LTnewLM_360082700.1:pep;Derives_from=LTnewLM_360082700.1;orthologous_to=LmjF.36.6880_mRNA;ortholog_cluster=OG0006749;product=term%3DBromodomain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00439;Ontology_term=GO:0005515 LTnewLM_36 Pfam protein_match 2674239 2674478 . - . Parent=LTnewLM_360082700.1:pep;Name=PF00439;signature_desc=Bromodomain;Ontology_term=GO:0005515 ### LTnewLM_36 AUGUSTUS gene 2675831 2676175 1 - . ID=LTnewLM_360082800 LTnewLM_36 AUGUSTUS mRNA 2675831 2676175 1 - . ID=LTnewLM_360082800.1;Parent=LTnewLM_360082800 LTnewLM_36 AUGUSTUS CDS 2675831 2676175 1 - 0 ID=LTnewLM_360082800.1:CDS:1;Parent=LTnewLM_360082800.1 ### LTnewLM_36 . polypeptide 2675831 2676175 . - . ID=LTnewLM_360082800.1:pep;Derives_from=LTnewLM_360082800.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2676944 2680864 1 - . ID=LTnewLM_360082900 LTnewLM_36 AUGUSTUS mRNA 2676944 2680864 1 - . ID=LTnewLM_360082900.1;Parent=LTnewLM_360082900 LTnewLM_36 AUGUSTUS CDS 2676944 2680864 1 - 0 ID=LTnewLM_360082900.1:CDS:1;Parent=LTnewLM_360082900.1 ### LTnewLM_36 . polypeptide 2676944 2680864 . - . ID=LTnewLM_360082900.1:pep;Derives_from=LTnewLM_360082900.1;orthologous_to=LmjF.36.6890_mRNA;ortholog_cluster=OG0006750;product=term%3DNup133 N terminal like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08801 LTnewLM_36 Pfam protein_match 2679467 2680693 . - . Parent=LTnewLM_360082900.1:pep;Name=PF08801;signature_desc=Nup133 N terminal like ### LTnewLM_36 AUGUSTUS gene 2681734 2683857 1 - . ID=LTnewLM_360083000 LTnewLM_36 AUGUSTUS mRNA 2681734 2683857 1 - . ID=LTnewLM_360083000.1;Parent=LTnewLM_360083000 LTnewLM_36 AUGUSTUS CDS 2681734 2683857 1 - 0 ID=LTnewLM_360083000.1:CDS:1;Parent=LTnewLM_360083000.1 ### LTnewLM_36 . polypeptide 2681734 2683857 . - . ID=LTnewLM_360083000.1:pep;Derives_from=LTnewLM_360083000.1;orthologous_to=LmjF.36.6900_mRNA;ortholog_cluster=OG0006751;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2685102 2686715 1 - . ID=LTnewLM_360083100 LTnewLM_36 AUGUSTUS mRNA 2685102 2686715 1 - . ID=LTnewLM_360083100.1;Parent=LTnewLM_360083100 LTnewLM_36 AUGUSTUS CDS 2685102 2686715 1 - 0 ID=LTnewLM_360083100.1:CDS:1;Parent=LTnewLM_360083100.1 ### LTnewLM_36 . polypeptide 2685102 2686715 . - . ID=LTnewLM_360083100.1:pep;Derives_from=LTnewLM_360083100.1;orthologous_to=LmjF.36.6910_mRNA;ortholog_cluster=OG0006752;product=term%3DTCP-1/cpn60 chaperonin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00118;Ontology_term=GO:0005524 LTnewLM_36 Pfam protein_match 2685156 2686619 . - . Parent=LTnewLM_360083100.1:pep;Name=PF00118;signature_desc=TCP-1/cpn60 chaperonin family;Ontology_term=GO:0005524 ### LTnewLM_36 . pseudogene 2687564 2688391 . - . ID=LTnewLM_360083200:pseudogene;coverage=1.0;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6920_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2687564 2688391 . - . ID=LTnewLM_360083200.1;Parent=LTnewLM_360083200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2687564 2688391 . - . ID=LTnewLM_360083200.1:pseudogenic_exon:1;Parent=LTnewLM_360083200.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2687564 2688391 . - . ID=LTnewLM_360083200.1:pep;Derives_from=LTnewLM_360083200.1;orthologous_to=LmjF.36.6920_mRNA;ortholog_cluster=OG0007701;product=term%3DRibosomal protein L1p/L10e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00687 LTnewLM_36 Pfam protein_match 2687693 2688265 . - . Parent=LTnewLM_360083200.1:pep;Name=PF00687;signature_desc=Ribosomal protein L1p/L10e family ### LTnewLM_36 AUGUSTUS gene 2689150 2691030 1 - . ID=LTnewLM_360083300 LTnewLM_36 AUGUSTUS mRNA 2689150 2691030 1 - . ID=LTnewLM_360083300.1;Parent=LTnewLM_360083300 LTnewLM_36 AUGUSTUS CDS 2689150 2691030 1 - 0 ID=LTnewLM_360083300.1:CDS:1;Parent=LTnewLM_360083300.1 ### LTnewLM_36 . polypeptide 2689150 2691030 . - . ID=LTnewLM_360083300.1:pep;Derives_from=LTnewLM_360083300.1;orthologous_to=LmjF.36.6930_mRNA;ortholog_cluster=OG0006753;product=term%3DC2H2-type zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13912 LTnewLM_36 Pfam protein_match 2689624 2689692 . - . Parent=LTnewLM_360083300.1:pep;Name=PF13912;signature_desc=C2H2-type zinc finger ### LTnewLM_36 AUGUSTUS gene 2691471 2691878 1 - . ID=LTnewLM_360083400 LTnewLM_36 AUGUSTUS mRNA 2691471 2691878 1 - . ID=LTnewLM_360083400.1;Parent=LTnewLM_360083400 LTnewLM_36 AUGUSTUS CDS 2691471 2691878 1 - 0 ID=LTnewLM_360083400.1:CDS:1;Parent=LTnewLM_360083400.1 ### LTnewLM_36 . polypeptide 2691471 2691878 . - . ID=LTnewLM_360083400.1:pep;Derives_from=LTnewLM_360083400.1;orthologous_to=LmjF.36.6935_mRNA;ortholog_cluster=OG0006754;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2692680 2694113 1 - . ID=LTnewLM_360083500 LTnewLM_36 AUGUSTUS mRNA 2692680 2694113 1 - . ID=LTnewLM_360083500.1;Parent=LTnewLM_360083500 LTnewLM_36 AUGUSTUS CDS 2692680 2694113 1 - 0 ID=LTnewLM_360083500.1:CDS:1;Parent=LTnewLM_360083500.1 ### LTnewLM_36 . polypeptide 2692680 2694113 . - . ID=LTnewLM_360083500.1:pep;Derives_from=LTnewLM_360083500.1;orthologous_to=LmjF.36.6940_mRNA;ortholog_cluster=OG0006755;product=term%3DThioredoxin/Thioredoxin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085|Pfam:PF13848;Ontology_term=GO:0045454 LTnewLM_36 Pfam protein_match 2692752 2693039 . - . Parent=LTnewLM_360083500.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 LTnewLM_36 Pfam protein_match 2693124 2693546 . - . Parent=LTnewLM_360083500.1:pep;Name=PF13848;signature_desc=Thioredoxin-like domain LTnewLM_36 Pfam protein_match 2693580 2693945 . - . Parent=LTnewLM_360083500.1:pep;Name=PF13848;signature_desc=Thioredoxin-like domain LTnewLM_36 Pfam protein_match 2693757 2694050 . - . Parent=LTnewLM_360083500.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_36 . pseudogene 2695352 2696554 . - . ID=LTnewLM_360083600:pseudogene;coverage=1.0;sequence_ID=0.964;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6950_0;has_internal_stop=true LTnewLM_36 . pseudogenic_transcript 2695352 2696554 . - . ID=LTnewLM_360083600.1;Parent=LTnewLM_360083600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_36 . pseudogenic_exon 2695352 2696554 . - . ID=LTnewLM_360083600.1:pseudogenic_exon:1;Parent=LTnewLM_360083600.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2695352 2696554 . - . ID=LTnewLM_360083600.1:pep;Derives_from=LTnewLM_360083600.1;orthologous_to=LmjF.36.6950_mRNA;ortholog_cluster=OG0007702;product=term%3DCytochrome b5-like Heme/Steroid binding domain/Fatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173|Pfam:PF00487;Ontology_term=GO:0006629,GO:0020037 LTnewLM_36 Pfam protein_match 2695454 2696155 . - . Parent=LTnewLM_360083600.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 LTnewLM_36 Pfam protein_match 2696357 2696506 . - . Parent=LTnewLM_360083600.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_36 AUGUSTUS gene 2697134 2698242 0.55 - . ID=LTnewLM_360083700 LTnewLM_36 AUGUSTUS mRNA 2697134 2698242 0.55 - . ID=LTnewLM_360083700.1;Parent=LTnewLM_360083700 LTnewLM_36 AUGUSTUS CDS 2697134 2697952 0.97 - 0 ID=LTnewLM_360083700.1:CDS:1;Parent=LTnewLM_360083700.1 LTnewLM_36 AUGUSTUS CDS 2698009 2698242 0.55 - 0 ID=LTnewLM_360083700.1:CDS:2;Parent=LTnewLM_360083700.1 ### LTnewLM_36 . polypeptide 2697134 2698242 . - . ID=LTnewLM_360083700.1:pep;Derives_from=LTnewLM_360083700.1;orthologous_to=LmjF.36.6960_mRNA;ortholog_cluster=OG0006756;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2698849 2699745 1 - . ID=LTnewLM_360083800 LTnewLM_36 AUGUSTUS mRNA 2698849 2699745 1 - . ID=LTnewLM_360083800.1;Parent=LTnewLM_360083800 LTnewLM_36 AUGUSTUS CDS 2698849 2699745 1 - 0 ID=LTnewLM_360083800.1:CDS:1;Parent=LTnewLM_360083800.1 ### LTnewLM_36 . polypeptide 2698849 2699745 . - . ID=LTnewLM_360083800.1:pep;Derives_from=LTnewLM_360083800.1;orthologous_to=LmjF.36.6970_mRNA;ortholog_cluster=OG0006757;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2700553 2702748 1 - . ID=LTnewLM_360083900 LTnewLM_36 AUGUSTUS mRNA 2700553 2702748 1 - . ID=LTnewLM_360083900.1;Parent=LTnewLM_360083900 LTnewLM_36 AUGUSTUS CDS 2700553 2702748 1 - 0 ID=LTnewLM_360083900.1:CDS:1;Parent=LTnewLM_360083900.1 ### LTnewLM_36 . polypeptide 2700553 2702748 . - . ID=LTnewLM_360083900.1:pep;Derives_from=LTnewLM_360083900.1;orthologous_to=LmjF.36.6980_mRNA;ortholog_cluster=OG0006758;product=term%3DEukaryotic translation initiation factor 3 subunit 8 N-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05470;Ontology_term=GO:0006413,GO:0005852,GO:0031369,GO:0003743 LTnewLM_36 Pfam protein_match 2701174 2701950 . - . Parent=LTnewLM_360083900.1:pep;Name=PF05470;signature_desc=Eukaryotic translation initiation factor 3 subunit 8 N-terminus;Ontology_term=GO:0003743,GO:0031369,GO:0006413,GO:0005852 ### LTnewLM_36 AUGUSTUS gene 2703173 2703670 1 - . ID=LTnewLM_360084000 LTnewLM_36 AUGUSTUS mRNA 2703173 2703670 1 - . ID=LTnewLM_360084000.1;Parent=LTnewLM_360084000 LTnewLM_36 AUGUSTUS CDS 2703173 2703670 1 - 0 ID=LTnewLM_360084000.1:CDS:1;Parent=LTnewLM_360084000.1 ### LTnewLM_36 . polypeptide 2703173 2703670 . - . ID=LTnewLM_360084000.1:pep;Derives_from=LTnewLM_360084000.1;product=term%3Dhypothetical protein ### LTnewLM_36 AUGUSTUS gene 2703822 2704316 1 - . ID=LTnewLM_360084100 LTnewLM_36 AUGUSTUS mRNA 2703822 2704316 1 - . ID=LTnewLM_360084100.1;Parent=LTnewLM_360084100 LTnewLM_36 AUGUSTUS CDS 2703822 2704316 1 - 0 ID=LTnewLM_360084100.1:CDS:1;Parent=LTnewLM_360084100.1 ### LTnewLM_36 . polypeptide 2703822 2704316 . - . ID=LTnewLM_360084100.1:pep;Derives_from=LTnewLM_360084100.1;orthologous_to=LmjF.36.6985_mRNA;ortholog_cluster=OG0006759;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2704748 2705587 1 - . ID=LTnewLM_360084200 LTnewLM_36 AUGUSTUS mRNA 2704748 2705587 1 - . ID=LTnewLM_360084200.1;Parent=LTnewLM_360084200 LTnewLM_36 AUGUSTUS CDS 2704748 2705587 1 - 0 ID=LTnewLM_360084200.1:CDS:1;Parent=LTnewLM_360084200.1 ### LTnewLM_36 . polypeptide 2704748 2705587 . - . ID=LTnewLM_360084200.1:pep;Derives_from=LTnewLM_360084200.1;orthologous_to=LmjF.36.6990_mRNA;ortholog_cluster=OG0006760;product=term%3DMOZ/SAS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01853;Ontology_term=GO:0016747,GO:0005634,GO:0006355 LTnewLM_36 Pfam protein_match 2704862 2705401 . - . Parent=LTnewLM_360084200.1:pep;Name=PF01853;signature_desc=MOZ/SAS family;Ontology_term=GO:0016747,GO:0006355,GO:0005634 ### LTnewLM_36 Liftoff gene 2706144 2706521 . - . ID=LTnewLM_360084300;coverage=1.0;sequence_ID=0.965;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.36.6995_0 LTnewLM_36 Liftoff mRNA 2706144 2706521 . - . ID=LTnewLM_360084300.1;Parent=LTnewLM_360084300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_36 Liftoff CDS 2706144 2706521 . - 0 ID=LTnewLM_360084300.1:CDS:1;Parent=LTnewLM_360084300.1;extra_copy_number=0 ### LTnewLM_36 . polypeptide 2706144 2706521 . - . ID=LTnewLM_360084300.1:pep;Derives_from=LTnewLM_360084300.1;orthologous_to=LmjF.36.6995_mRNA;ortholog_cluster=OG0006761;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_36 AUGUSTUS gene 2707759 2708484 1 - . ID=LTnewLM_360084400 LTnewLM_36 AUGUSTUS mRNA 2707759 2708484 1 - . ID=LTnewLM_360084400.1;Parent=LTnewLM_360084400 LTnewLM_36 AUGUSTUS CDS 2707759 2708484 1 - 0 ID=LTnewLM_360084400.1:CDS:1;Parent=LTnewLM_360084400.1 ### LTnewLM_36 . polypeptide 2707759 2708484 . - . ID=LTnewLM_360084400.1:pep;Derives_from=LTnewLM_360084400.1;orthologous_to=LmjF.36.7000_mRNA;ortholog_cluster=OG0006762;product=term%3DPSP1 C-terminal conserved region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04468 LTnewLM_36 Pfam protein_match 2707780 2708031 . - . Parent=LTnewLM_360084400.1:pep;Name=PF04468;signature_desc=PSP1 C-terminal conserved region ### LTnewLM_36 AUGUSTUS gene 2724893 2726791 0.74 - . ID=LTnewLM_360084500 LTnewLM_36 AUGUSTUS mRNA 2724893 2726791 0.74 - . ID=LTnewLM_360084500.1;Parent=LTnewLM_360084500 LTnewLM_36 AUGUSTUS CDS 2724893 2725118 0.83 - 1 ID=LTnewLM_360084500.1:CDS:1;Parent=LTnewLM_360084500.1 LTnewLM_36 AUGUSTUS CDS 2726757 2726791 0.75 - 0 ID=LTnewLM_360084500.1:CDS:2;Parent=LTnewLM_360084500.1 ### LTnewLM_36 . polypeptide 2724893 2726791 . - . ID=LTnewLM_360084500.1:pep;Derives_from=LTnewLM_360084500.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 1 845 0.89 + . ID=LTnewLM_040005000;fiveEndPartial=true;Start_range=.,. LTnewLM_4 AUGUSTUS mRNA 1 845 0.89 + . ID=LTnewLM_040005000.1;Parent=LTnewLM_040005000 LTnewLM_4 AUGUSTUS CDS 645 845 0.89 + 0 ID=LTnewLM_040005000.1:CDS:1;Parent=LTnewLM_040005000.1 ### LTnewLM_4 . contig 1 466780 . + . Name=LTnewLM_CTG000038 LTnewLM_4 . polypeptide 645 845 . + . ID=LTnewLM_040005000.1:pep;Derives_from=LTnewLM_040005000.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 5169 8240 1 + . ID=LTnewLM_040005100 LTnewLM_4 AUGUSTUS mRNA 5169 8240 1 + . ID=LTnewLM_040005100.1;Parent=LTnewLM_040005100 LTnewLM_4 AUGUSTUS CDS 5169 8240 1 + 0 ID=LTnewLM_040005100.1:CDS:1;Parent=LTnewLM_040005100.1 ### LTnewLM_4 . polypeptide 5169 8240 . + . ID=LTnewLM_040005100.1:pep;Derives_from=LTnewLM_040005100.1;orthologous_to=LmjF.04.0010_mRNA;ortholog_cluster=OG0006763;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702|Pfam:PF13246|Pfam:PF08282|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_4 Pfam protein_match 5220 5399 . + . Parent=LTnewLM_040005100.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_4 Pfam protein_match 5544 6170 . + . Parent=LTnewLM_040005100.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_4 Pfam protein_match 6225 7313 . + . Parent=LTnewLM_040005100.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_4 Pfam protein_match 6438 6755 . + . Parent=LTnewLM_040005100.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_4 Pfam protein_match 7263 7406 . + . Parent=LTnewLM_040005100.1:pep;Name=PF08282;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_4 Pfam protein_match 7521 8165 . + . Parent=LTnewLM_040005100.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus ### LTnewLM_4 . polypeptide 10017 10217 . + . ID=LTnewLM_040005200.1:pep;Derives_from=LTnewLM_040005200.1;orthologous_to=LTnewLM_040005200.2,LTnewLM_040005200.3,LmjF.04.0020_mRNA;ortholog_cluster=OG0000266;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 10017 11258 2.11 + . ID=LTnewLM_040005200 LTnewLM_4 AUGUSTUS mRNA 10017 10217 0.76 + . ID=LTnewLM_040005200.1;Parent=LTnewLM_040005200 LTnewLM_4 AUGUSTUS CDS 10017 10217 0.76 + 0 ID=LTnewLM_040005200.1:CDS:1;Parent=LTnewLM_040005200.1 LTnewLM_4 AUGUSTUS mRNA 10017 11258 0.59 + . ID=LTnewLM_040005200.2;Parent=LTnewLM_040005200 LTnewLM_4 AUGUSTUS CDS 10017 10206 0.65 + 0 ID=LTnewLM_040005200.2:CDS:1;Parent=LTnewLM_040005200.2 LTnewLM_4 AUGUSTUS CDS 10267 11258 0.59 + 2 ID=LTnewLM_040005200.2:CDS:2;Parent=LTnewLM_040005200.2 LTnewLM_4 AUGUSTUS mRNA 10344 11258 0.76 + . ID=LTnewLM_040005200.3;Parent=LTnewLM_040005200 LTnewLM_4 AUGUSTUS CDS 10344 11258 0.76 + 0 ID=LTnewLM_040005200.3:CDS:1;Parent=LTnewLM_040005200.3 ### LTnewLM_4 . polypeptide 10017 11258 . + . ID=LTnewLM_040005200.2:pep;Derives_from=LTnewLM_040005200.2;orthologous_to=LTnewLM_040005200.1,LTnewLM_040005200.3,LmjF.04.0020_mRNA;ortholog_cluster=OG0000266;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_4 Pfam protein_match 10161 11063 . + . Parent=LTnewLM_040005200.2:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_4 . polypeptide 10344 11258 . + . ID=LTnewLM_040005200.3:pep;Derives_from=LTnewLM_040005200.3;orthologous_to=LTnewLM_040005200.1,LTnewLM_040005200.2,LmjF.04.0020_mRNA;ortholog_cluster=OG0000266;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_4 Pfam protein_match 10344 11123 . + . Parent=LTnewLM_040005200.3:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_4 AUGUSTUS gene 13179 15422 1 + . ID=LTnewLM_040005300 LTnewLM_4 AUGUSTUS mRNA 13179 15422 1 + . ID=LTnewLM_040005300.1;Parent=LTnewLM_040005300 LTnewLM_4 AUGUSTUS CDS 13179 15422 1 + 0 ID=LTnewLM_040005300.1:CDS:1;Parent=LTnewLM_040005300.1 ### LTnewLM_4 . polypeptide 13179 15422 . + . ID=LTnewLM_040005300.1:pep;Derives_from=LTnewLM_040005300.1;orthologous_to=LmjF.04.0030_mRNA;ortholog_cluster=OG0006764;product=term%3D3'5'-cyclic nucleotide phosphodiesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00233;Ontology_term=GO:0007165,GO:0004114 LTnewLM_4 Pfam protein_match 13845 14525 . + . Parent=LTnewLM_040005300.1:pep;Name=PF00233;signature_desc=3'5'-cyclic nucleotide phosphodiesterase;Ontology_term=GO:0004114,GO:0007165 ### LTnewLM_4 AUGUSTUS gene 16410 16631 1 + . ID=LTnewLM_040005400 LTnewLM_4 AUGUSTUS mRNA 16410 16631 1 + . ID=LTnewLM_040005400.1;Parent=LTnewLM_040005400 LTnewLM_4 AUGUSTUS CDS 16410 16631 1 + 0 ID=LTnewLM_040005400.1:CDS:1;Parent=LTnewLM_040005400.1 ### LTnewLM_4 . polypeptide 16410 16631 . + . ID=LTnewLM_040005400.1:pep;Derives_from=LTnewLM_040005400.1;orthologous_to=LmjF.04.0035_mRNA_1;ortholog_cluster=OG0006765;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 17135 18454 1 + . ID=LTnewLM_040005500 LTnewLM_4 AUGUSTUS mRNA 17135 18454 1 + . ID=LTnewLM_040005500.1;Parent=LTnewLM_040005500 LTnewLM_4 AUGUSTUS CDS 17135 18454 1 + 0 ID=LTnewLM_040005500.1:CDS:1;Parent=LTnewLM_040005500.1 ### LTnewLM_4 . polypeptide 17135 18454 . + . ID=LTnewLM_040005500.1:pep;Derives_from=LTnewLM_040005500.1;orthologous_to=LmjF.04.0040_mRNA;ortholog_cluster=OG0006766;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 22565 23068 1 + . ID=LTnewLM_040005600 LTnewLM_4 AUGUSTUS mRNA 22565 23068 1 + . ID=LTnewLM_040005600.1;Parent=LTnewLM_040005600 LTnewLM_4 AUGUSTUS CDS 22565 23068 1 + 0 ID=LTnewLM_040005600.1:CDS:1;Parent=LTnewLM_040005600.1 ### LTnewLM_4 . polypeptide 22565 23068 . + . ID=LTnewLM_040005600.1:pep;Derives_from=LTnewLM_040005600.1;orthologous_to=LmjF.04.0045_mRNA;ortholog_cluster=OG0006767;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 24215 25804 1 + . ID=LTnewLM_040005700 LTnewLM_4 AUGUSTUS mRNA 24215 25804 1 + . ID=LTnewLM_040005700.1;Parent=LTnewLM_040005700 LTnewLM_4 AUGUSTUS CDS 24215 25804 1 + 0 ID=LTnewLM_040005700.1:CDS:1;Parent=LTnewLM_040005700.1 ### LTnewLM_4 . polypeptide 24215 25804 . + . ID=LTnewLM_040005700.1:pep;Derives_from=LTnewLM_040005700.1;orthologous_to=LmjF.04.0050_mRNA;ortholog_cluster=OG0006768;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 27917 28705 1 + . ID=LTnewLM_040005800 LTnewLM_4 AUGUSTUS mRNA 27917 28705 1 + . ID=LTnewLM_040005800.1;Parent=LTnewLM_040005800 LTnewLM_4 AUGUSTUS CDS 27917 28705 1 + 0 ID=LTnewLM_040005800.1:CDS:1;Parent=LTnewLM_040005800.1 ### LTnewLM_4 . polypeptide 27917 28705 . + . ID=LTnewLM_040005800.1:pep;Derives_from=LTnewLM_040005800.1;orthologous_to=LmjF.04.0060_mRNA;ortholog_cluster=OG0006769;product=term%3DC-terminal topoisomerase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14370 LTnewLM_4 Pfam protein_match 28499 28699 . + . Parent=LTnewLM_040005800.1:pep;Name=PF14370;signature_desc=C-terminal topoisomerase domain ### LTnewLM_4 AUGUSTUS gene 29450 30187 1 + . ID=LTnewLM_040005900 LTnewLM_4 AUGUSTUS mRNA 29450 30187 1 + . ID=LTnewLM_040005900.1;Parent=LTnewLM_040005900 LTnewLM_4 AUGUSTUS CDS 29450 30187 1 + 0 ID=LTnewLM_040005900.1:CDS:1;Parent=LTnewLM_040005900.1 ### LTnewLM_4 . polypeptide 29450 30187 . + . ID=LTnewLM_040005900.1:pep;Derives_from=LTnewLM_040005900.1;orthologous_to=LmjF.04.0070_mRNA;ortholog_cluster=OG0006770;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 30882 31358 1 + . ID=LTnewLM_040006000 LTnewLM_4 AUGUSTUS mRNA 30882 31358 1 + . ID=LTnewLM_040006000.1;Parent=LTnewLM_040006000 LTnewLM_4 AUGUSTUS CDS 30882 31358 1 + 0 ID=LTnewLM_040006000.1:CDS:1;Parent=LTnewLM_040006000.1 ### LTnewLM_4 . polypeptide 30882 31358 . + . ID=LTnewLM_040006000.1:pep;Derives_from=LTnewLM_040006000.1;orthologous_to=LmjF.04.0080_mRNA;ortholog_cluster=OG0006771;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 32435 38053 1 + . ID=LTnewLM_040006100 LTnewLM_4 AUGUSTUS mRNA 32435 38053 1 + . ID=LTnewLM_040006100.1;Parent=LTnewLM_040006100 LTnewLM_4 AUGUSTUS CDS 32435 38053 1 + 0 ID=LTnewLM_040006100.1:CDS:1;Parent=LTnewLM_040006100.1 ### LTnewLM_4 . polypeptide 32435 38053 . + . ID=LTnewLM_040006100.1:pep;Derives_from=LTnewLM_040006100.1;orthologous_to=LmjF.04.0090_mRNA;ortholog_cluster=OG0006772;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 39193 40926 1 + . ID=LTnewLM_040006200 LTnewLM_4 AUGUSTUS mRNA 39193 40926 1 + . ID=LTnewLM_040006200.1;Parent=LTnewLM_040006200 LTnewLM_4 AUGUSTUS CDS 39193 40926 1 + 0 ID=LTnewLM_040006200.1:CDS:1;Parent=LTnewLM_040006200.1 ### LTnewLM_4 . polypeptide 39193 40926 . + . ID=LTnewLM_040006200.1:pep;Derives_from=LTnewLM_040006200.1;orthologous_to=LmjF.04.0100_mRNA;ortholog_cluster=OG0006773;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 42008 43051 1 + . ID=LTnewLM_040006300 LTnewLM_4 AUGUSTUS mRNA 42008 43051 1 + . ID=LTnewLM_040006300.1;Parent=LTnewLM_040006300 LTnewLM_4 AUGUSTUS CDS 42008 43051 1 + 0 ID=LTnewLM_040006300.1:CDS:1;Parent=LTnewLM_040006300.1 ### LTnewLM_4 . polypeptide 42008 43051 . + . ID=LTnewLM_040006300.1:pep;Derives_from=LTnewLM_040006300.1;orthologous_to=LmjF.04.0110_mRNA;ortholog_cluster=OG0006774;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 43708 44706 1 + . ID=LTnewLM_040006400 LTnewLM_4 AUGUSTUS mRNA 43708 44706 1 + . ID=LTnewLM_040006400.1;Parent=LTnewLM_040006400 LTnewLM_4 AUGUSTUS CDS 43708 44706 1 + 0 ID=LTnewLM_040006400.1:CDS:1;Parent=LTnewLM_040006400.1 ### LTnewLM_4 . polypeptide 43708 44706 . + . ID=LTnewLM_040006400.1:pep;Derives_from=LTnewLM_040006400.1;orthologous_to=LmjF.04.0120_mRNA;ortholog_cluster=OG0006775;product=term%3DKH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15985 LTnewLM_4 Pfam protein_match 44353 44571 . + . Parent=LTnewLM_040006400.1:pep;Name=PF15985;signature_desc=KH domain ### LTnewLM_4 AUGUSTUS gene 45602 46078 1 + . ID=LTnewLM_040006500 LTnewLM_4 AUGUSTUS mRNA 45602 46078 1 + . ID=LTnewLM_040006500.1;Parent=LTnewLM_040006500 LTnewLM_4 AUGUSTUS CDS 45602 46078 1 + 0 ID=LTnewLM_040006500.1:CDS:1;Parent=LTnewLM_040006500.1 ### LTnewLM_4 . polypeptide 45602 46078 . + . ID=LTnewLM_040006500.1:pep;Derives_from=LTnewLM_040006500.1;orthologous_to=LmjF.04.0123_mRNA;ortholog_cluster=OG0006776;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 47043 48347 1 + . ID=LTnewLM_040006600 LTnewLM_4 AUGUSTUS mRNA 47043 48347 1 + . ID=LTnewLM_040006600.1;Parent=LTnewLM_040006600 LTnewLM_4 AUGUSTUS CDS 47043 48347 1 + 0 ID=LTnewLM_040006600.1:CDS:1;Parent=LTnewLM_040006600.1 ### LTnewLM_4 . polypeptide 47043 48347 . + . ID=LTnewLM_040006600.1:pep;Derives_from=LTnewLM_040006600.1;orthologous_to=LmjF.04.0127_mRNA;ortholog_cluster=OG0006777;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 48843 50420 1 + . ID=LTnewLM_040006700 LTnewLM_4 AUGUSTUS mRNA 48843 50420 1 + . ID=LTnewLM_040006700.1;Parent=LTnewLM_040006700 LTnewLM_4 AUGUSTUS CDS 48843 50420 1 + 0 ID=LTnewLM_040006700.1:CDS:1;Parent=LTnewLM_040006700.1 ### LTnewLM_4 . polypeptide 48843 50420 . + . ID=LTnewLM_040006700.1:pep;Derives_from=LTnewLM_040006700.1;orthologous_to=LmjF.04.0130_mRNA,LmjF.04.0140_mRNA,LmjF.04.0150_mRNA,LmjF.04.0160_mRNA,LmjF.04.0170_mRNA;ortholog_cluster=OG0000074;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 52492 54006 1 + . ID=LTnewLM_040006800 LTnewLM_4 AUGUSTUS mRNA 52492 54006 1 + . ID=LTnewLM_040006800.1;Parent=LTnewLM_040006800 LTnewLM_4 AUGUSTUS CDS 52492 54006 1 + 0 ID=LTnewLM_040006800.1:CDS:1;Parent=LTnewLM_040006800.1 ### LTnewLM_4 . polypeptide 52492 54006 . + . ID=LTnewLM_040006800.1:pep;Derives_from=LTnewLM_040006800.1;orthologous_to=LmjF.04.0180_mRNA;ortholog_cluster=OG0006778;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 54955 57084 1 + . ID=LTnewLM_040006900 LTnewLM_4 AUGUSTUS mRNA 54955 57084 1 + . ID=LTnewLM_040006900.1;Parent=LTnewLM_040006900 LTnewLM_4 AUGUSTUS CDS 54955 57084 1 + 0 ID=LTnewLM_040006900.1:CDS:1;Parent=LTnewLM_040006900.1 ### LTnewLM_4 . polypeptide 54955 57084 . + . ID=LTnewLM_040006900.1:pep;Derives_from=LTnewLM_040006900.1;orthologous_to=LmjF.04.0190_mRNA;ortholog_cluster=OG0006779;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 58177 58725 1 + . ID=LTnewLM_040007000 LTnewLM_4 AUGUSTUS mRNA 58177 58725 1 + . ID=LTnewLM_040007000.1;Parent=LTnewLM_040007000 LTnewLM_4 AUGUSTUS CDS 58177 58725 1 + 0 ID=LTnewLM_040007000.1:CDS:1;Parent=LTnewLM_040007000.1 ### LTnewLM_4 . polypeptide 58177 58725 . + . ID=LTnewLM_040007000.1:pep;Derives_from=LTnewLM_040007000.1;orthologous_to=LmjF.04.0200_mRNA;ortholog_cluster=OG0006780;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 60809 61672 1 + . ID=LTnewLM_040007100 LTnewLM_4 AUGUSTUS mRNA 60809 61672 1 + . ID=LTnewLM_040007100.1;Parent=LTnewLM_040007100 LTnewLM_4 AUGUSTUS CDS 60809 61672 1 + 0 ID=LTnewLM_040007100.1:CDS:1;Parent=LTnewLM_040007100.1 ### LTnewLM_4 . polypeptide 60809 61672 . + . ID=LTnewLM_040007100.1:pep;Derives_from=LTnewLM_040007100.1;orthologous_to=LmjF.04.0210_mRNA;ortholog_cluster=OG0006781;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 64461 65525 1 + . ID=LTnewLM_040007200 LTnewLM_4 AUGUSTUS mRNA 64461 65525 1 + . ID=LTnewLM_040007200.1;Parent=LTnewLM_040007200 LTnewLM_4 AUGUSTUS CDS 64461 65525 1 + 0 ID=LTnewLM_040007200.1:CDS:1;Parent=LTnewLM_040007200.1 ### LTnewLM_4 . polypeptide 64461 65525 . + . ID=LTnewLM_040007200.1:pep;Derives_from=LTnewLM_040007200.1;orthologous_to=LmjF.04.0220_mRNA;ortholog_cluster=OG0006782;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 67165 67935 1 + . ID=LTnewLM_040007300 LTnewLM_4 AUGUSTUS mRNA 67165 67935 1 + . ID=LTnewLM_040007300.1;Parent=LTnewLM_040007300 LTnewLM_4 AUGUSTUS CDS 67165 67935 1 + 0 ID=LTnewLM_040007300.1:CDS:1;Parent=LTnewLM_040007300.1 ### LTnewLM_4 . polypeptide 67165 67935 . + . ID=LTnewLM_040007300.1:pep;Derives_from=LTnewLM_040007300.1;orthologous_to=LmjF.04.0230_mRNA;ortholog_cluster=OG0006783;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 69312 70184 1 + . ID=LTnewLM_040007400 LTnewLM_4 AUGUSTUS mRNA 69312 70184 1 + . ID=LTnewLM_040007400.1;Parent=LTnewLM_040007400 LTnewLM_4 AUGUSTUS CDS 69312 70184 1 + 0 ID=LTnewLM_040007400.1:CDS:1;Parent=LTnewLM_040007400.1 ### LTnewLM_4 . polypeptide 69312 70184 . + . ID=LTnewLM_040007400.1:pep;Derives_from=LTnewLM_040007400.1;orthologous_to=LmjF.04.0240_mRNA;ortholog_cluster=OG0006784;product=term%3DGRAM domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02893 LTnewLM_4 Pfam protein_match 69642 69779 . + . Parent=LTnewLM_040007400.1:pep;Name=PF02893;signature_desc=GRAM domain ### LTnewLM_4 Liftoff gene 72005 76420 . + . ID=LTnewLM_040007500;coverage=0.997;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0250_0 LTnewLM_4 Liftoff mRNA 72005 76420 . + . ID=LTnewLM_040007500.1;Parent=LTnewLM_040007500;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_4 Liftoff CDS 72005 76420 . + 0 ID=LTnewLM_040007500.1:CDS:1;Parent=LTnewLM_040007500.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 72005 76420 . + . ID=LTnewLM_040007500.1:pep;Derives_from=LTnewLM_040007500.1;orthologous_to=LmjF.04.0250_mRNA;ortholog_cluster=OG0006785;product=term%3DRNA pseudouridylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00849;Ontology_term=GO:0003723,GO:0009982,GO:0009451,GO:0001522 LTnewLM_4 Pfam protein_match 75326 76126 . + . Parent=LTnewLM_040007500.1:pep;Name=PF00849;signature_desc=RNA pseudouridylate synthase;Ontology_term=GO:0003723,GO:0009982,GO:0001522,GO:0009451 ### LTnewLM_4 AUGUSTUS gene 77093 77899 1 + . ID=LTnewLM_040007600 LTnewLM_4 AUGUSTUS mRNA 77093 77899 1 + . ID=LTnewLM_040007600.1;Parent=LTnewLM_040007600 LTnewLM_4 AUGUSTUS CDS 77093 77899 1 + 0 ID=LTnewLM_040007600.1:CDS:1;Parent=LTnewLM_040007600.1 ### LTnewLM_4 . polypeptide 77093 77899 . + . ID=LTnewLM_040007600.1:pep;Derives_from=LTnewLM_040007600.1;orthologous_to=LmjF.04.0260_mRNA;ortholog_cluster=OG0006786;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 78539 79981 1 + . ID=LTnewLM_040007700 LTnewLM_4 AUGUSTUS mRNA 78539 79981 1 + . ID=LTnewLM_040007700.1;Parent=LTnewLM_040007700 LTnewLM_4 AUGUSTUS CDS 78539 79981 1 + 0 ID=LTnewLM_040007700.1:CDS:1;Parent=LTnewLM_040007700.1 ### LTnewLM_4 . polypeptide 78539 79981 . + . ID=LTnewLM_040007700.1:pep;Derives_from=LTnewLM_040007700.1;orthologous_to=LmjF.04.0270_mRNA;ortholog_cluster=OG0006787;product=term%3DMitochondrial 39-S ribosomal protein L47 (MRP-L47)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06984;Ontology_term=GO:0006412,GO:0003735,GO:0005761 LTnewLM_4 Pfam protein_match 78575 78838 . + . Parent=LTnewLM_040007700.1:pep;Name=PF06984;signature_desc=Mitochondrial 39-S ribosomal protein L47 (MRP-L47);Ontology_term=GO:0003735,GO:0006412,GO:0005761 ### LTnewLM_4 AUGUSTUS gene 80740 86622 1 + . ID=LTnewLM_040007800 LTnewLM_4 AUGUSTUS mRNA 80740 86622 1 + . ID=LTnewLM_040007800.1;Parent=LTnewLM_040007800 LTnewLM_4 AUGUSTUS CDS 80740 86622 1 + 0 ID=LTnewLM_040007800.1:CDS:1;Parent=LTnewLM_040007800.1 ### LTnewLM_4 . polypeptide 80740 86622 . + . ID=LTnewLM_040007800.1:pep;Derives_from=LTnewLM_040007800.1;orthologous_to=LmjF.04.0280_mRNA;ortholog_cluster=OG0006788;product=term%3DAMP deaminase/Adenosine deaminase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19326|Pfam:PF00962;Ontology_term=GO:0019239 LTnewLM_4 Pfam protein_match 81427 81828 . + . Parent=LTnewLM_040007800.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_4 Pfam protein_match 82834 83457 . + . Parent=LTnewLM_040007800.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_4 Pfam protein_match 84109 85710 . + . Parent=LTnewLM_040007800.1:pep;Name=PF19326;signature_desc=AMP deaminase LTnewLM_4 Pfam protein_match 85249 85572 . + . Parent=LTnewLM_040007800.1:pep;Name=PF00962;signature_desc=Adenosine deaminase;Ontology_term=GO:0019239 ### LTnewLM_4 AUGUSTUS gene 88121 89464 1 + . ID=LTnewLM_040007900 LTnewLM_4 AUGUSTUS mRNA 88121 89464 1 + . ID=LTnewLM_040007900.1;Parent=LTnewLM_040007900 LTnewLM_4 AUGUSTUS CDS 88121 89464 1 + 0 ID=LTnewLM_040007900.1:CDS:1;Parent=LTnewLM_040007900.1 ### LTnewLM_4 . polypeptide 88121 89464 . + . ID=LTnewLM_040007900.1:pep;Derives_from=LTnewLM_040007900.1;orthologous_to=LmjF.04.0290_mRNA;ortholog_cluster=OG0006789;product=term%3DAlcohol dehydrogenase GroES-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08240;Ontology_term=GO:0055114,GO:0016491 LTnewLM_4 Pfam protein_match 88259 88456 . + . Parent=LTnewLM_040007900.1:pep;Name=PF08240;signature_desc=Alcohol dehydrogenase GroES-like domain;Ontology_term=GO:0016491,GO:0055114 ### LTnewLM_4 AUGUSTUS gene 90873 91847 1 + . ID=LTnewLM_040008000 LTnewLM_4 AUGUSTUS mRNA 90873 91847 1 + . ID=LTnewLM_040008000.1;Parent=LTnewLM_040008000 LTnewLM_4 AUGUSTUS CDS 90873 91847 1 + 0 ID=LTnewLM_040008000.1:CDS:1;Parent=LTnewLM_040008000.1 ### LTnewLM_4 . polypeptide 90873 91847 . + . ID=LTnewLM_040008000.1:pep;Derives_from=LTnewLM_040008000.1;orthologous_to=LmjF.04.0300_mRNA;ortholog_cluster=OG0006790;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 92452 94383 1 + . ID=LTnewLM_040008100 LTnewLM_4 AUGUSTUS mRNA 92452 94383 1 + . ID=LTnewLM_040008100.1;Parent=LTnewLM_040008100 LTnewLM_4 AUGUSTUS CDS 92452 94383 1 + 0 ID=LTnewLM_040008100.1:CDS:1;Parent=LTnewLM_040008100.1 ### LTnewLM_4 . polypeptide 92452 94383 . + . ID=LTnewLM_040008100.1:pep;Derives_from=LTnewLM_040008100.1;orthologous_to=LTnewLM_040008200.1,LmjF.04.0310_mRNA,LmjF.04.0320_mRNA;ortholog_cluster=OG0000267;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_4 Pfam protein_match 92566 93537 . + . Parent=LTnewLM_040008100.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain LTnewLM_4 Pfam protein_match 93661 94284 . + . Parent=LTnewLM_040008100.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal ### LTnewLM_4 AUGUSTUS gene 95789 97219 1 + . ID=LTnewLM_040008200 LTnewLM_4 AUGUSTUS mRNA 95789 97219 1 + . ID=LTnewLM_040008200.1;Parent=LTnewLM_040008200 LTnewLM_4 AUGUSTUS CDS 95789 97219 1 + 0 ID=LTnewLM_040008200.1:CDS:1;Parent=LTnewLM_040008200.1 ### LTnewLM_4 . polypeptide 95789 97219 . + . ID=LTnewLM_040008200.1:pep;Derives_from=LTnewLM_040008200.1;orthologous_to=LTnewLM_040008100.1,LmjF.04.0310_mRNA,LmjF.04.0320_mRNA;ortholog_cluster=OG0000267;product=term%3DGlycosyl hydrolases family 32 N-terminal domain/Glycosyl hydrolases family 32 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00251|Pfam:PF08244 LTnewLM_4 Pfam protein_match 95867 96373 . + . Parent=LTnewLM_040008200.1:pep;Name=PF00251;signature_desc=Glycosyl hydrolases family 32 N-terminal domain LTnewLM_4 Pfam protein_match 96509 97120 . + . Parent=LTnewLM_040008200.1:pep;Name=PF08244;signature_desc=Glycosyl hydrolases family 32 C terminal ### LTnewLM_4 AUGUSTUS gene 98422 100986 1 + . ID=LTnewLM_040008300 LTnewLM_4 AUGUSTUS mRNA 98422 100986 1 + . ID=LTnewLM_040008300.1;Parent=LTnewLM_040008300 LTnewLM_4 AUGUSTUS CDS 98422 100986 1 + 0 ID=LTnewLM_040008300.1:CDS:1;Parent=LTnewLM_040008300.1 ### LTnewLM_4 . polypeptide 98422 100986 . + . ID=LTnewLM_040008300.1:pep;Derives_from=LTnewLM_040008300.1;orthologous_to=LmjF.04.0330_mRNA;ortholog_cluster=OG0006791;product=term%3DRNB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00773;Ontology_term=GO:0003723,GO:0004540 LTnewLM_4 Pfam protein_match 99154 100278 . + . Parent=LTnewLM_040008300.1:pep;Name=PF00773;signature_desc=RNB domain;Ontology_term=GO:0003723,GO:0004540 ### LTnewLM_4 AUGUSTUS gene 101637 102191 1 + . ID=LTnewLM_040008400 LTnewLM_4 AUGUSTUS mRNA 101637 102191 1 + . ID=LTnewLM_040008400.1;Parent=LTnewLM_040008400 LTnewLM_4 AUGUSTUS CDS 101637 102191 1 + 0 ID=LTnewLM_040008400.1:CDS:1;Parent=LTnewLM_040008400.1 ### LTnewLM_4 . polypeptide 101637 102191 . + . ID=LTnewLM_040008400.1:pep;Derives_from=LTnewLM_040008400.1;orthologous_to=LmjF.04.0340_mRNA;ortholog_cluster=OG0006792;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071|Pfam:PF01926;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_4 Pfam protein_match 101661 102182 . + . Parent=LTnewLM_040008400.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_4 Pfam protein_match 101685 102086 . + . Parent=LTnewLM_040008400.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_4 Pfam protein_match 101691 102041 . + . Parent=LTnewLM_040008400.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_4 Pfam protein_match 101691 102062 . + . Parent=LTnewLM_040008400.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_4 Pfam protein_match 101691 102182 . + . Parent=LTnewLM_040008400.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_4 Pfam protein_match 101694 102032 . + . Parent=LTnewLM_040008400.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_4 AUGUSTUS gene 104175 110582 1 + . ID=LTnewLM_040008500 LTnewLM_4 AUGUSTUS mRNA 104175 110582 1 + . ID=LTnewLM_040008500.1;Parent=LTnewLM_040008500 LTnewLM_4 AUGUSTUS CDS 104175 105660 1 + 0 ID=LTnewLM_040008500.1:CDS:1;Parent=LTnewLM_040008500.1 LTnewLM_4 AUGUSTUS CDS 105736 110582 1 + 2 ID=LTnewLM_040008500.1:CDS:2;Parent=LTnewLM_040008500.1 ### LTnewLM_4 . polypeptide 104175 110582 . + . ID=LTnewLM_040008500.1:pep;Derives_from=LTnewLM_040008500.1;orthologous_to=LmjF.04.0350_mRNA;ortholog_cluster=OG0006793;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 112255 112827 1 + . ID=LTnewLM_040008600 LTnewLM_4 AUGUSTUS mRNA 112255 112827 1 + . ID=LTnewLM_040008600.1;Parent=LTnewLM_040008600 LTnewLM_4 AUGUSTUS CDS 112255 112827 1 + 0 ID=LTnewLM_040008600.1:CDS:1;Parent=LTnewLM_040008600.1 ### LTnewLM_4 . polypeptide 112255 112827 . + . ID=LTnewLM_040008600.1:pep;Derives_from=LTnewLM_040008600.1;orthologous_to=LmjF.04.0370_mRNA;ortholog_cluster=OG0006794;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 113893 114954 1 + . ID=LTnewLM_040008700 LTnewLM_4 AUGUSTUS mRNA 113893 114954 1 + . ID=LTnewLM_040008700.1;Parent=LTnewLM_040008700 LTnewLM_4 AUGUSTUS CDS 113893 114954 1 + 0 ID=LTnewLM_040008700.1:CDS:1;Parent=LTnewLM_040008700.1 ### LTnewLM_4 . polypeptide 113893 114954 . + . ID=LTnewLM_040008700.1:pep;Derives_from=LTnewLM_040008700.1;orthologous_to=LmjF.04.0380_mRNA;ortholog_cluster=OG0006795;product=term%3DPhytanoyl-CoA dioxygenase (PhyH)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05721 LTnewLM_4 Pfam protein_match 114067 114765 . + . Parent=LTnewLM_040008700.1:pep;Name=PF05721;signature_desc=Phytanoyl-CoA dioxygenase (PhyH) ### LTnewLM_4 AUGUSTUS gene 123963 124733 1 - . ID=LTnewLM_040008800 LTnewLM_4 AUGUSTUS mRNA 123963 124733 1 - . ID=LTnewLM_040008800.1;Parent=LTnewLM_040008800 LTnewLM_4 AUGUSTUS CDS 123963 124733 1 - 0 ID=LTnewLM_040008800.1:CDS:1;Parent=LTnewLM_040008800.1 ### LTnewLM_4 . polypeptide 123963 124733 . - . ID=LTnewLM_040008800.1:pep;Derives_from=LTnewLM_040008800.1;orthologous_to=LmjF.04.0390_mRNA;ortholog_cluster=OG0006796;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 125918 126631 0.43 - . ID=LTnewLM_040008900 LTnewLM_4 AUGUSTUS mRNA 125918 126631 0.43 - . ID=LTnewLM_040008900.1;Parent=LTnewLM_040008900 LTnewLM_4 AUGUSTUS CDS 125918 126216 0.43 - 2 ID=LTnewLM_040008900.1:CDS:1;Parent=LTnewLM_040008900.1 LTnewLM_4 AUGUSTUS CDS 126406 126631 0.48 - 0 ID=LTnewLM_040008900.1:CDS:2;Parent=LTnewLM_040008900.1 ### LTnewLM_4 . polypeptide 125918 126631 . - . ID=LTnewLM_040008900.1:pep;Derives_from=LTnewLM_040008900.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 127673 128695 1 - . ID=LTnewLM_040009000 LTnewLM_4 AUGUSTUS mRNA 127673 128695 1 - . ID=LTnewLM_040009000.1;Parent=LTnewLM_040009000 LTnewLM_4 AUGUSTUS CDS 127673 128695 1 - 0 ID=LTnewLM_040009000.1:CDS:1;Parent=LTnewLM_040009000.1 ### LTnewLM_4 . polypeptide 127673 128695 . - . ID=LTnewLM_040009000.1:pep;Derives_from=LTnewLM_040009000.1;orthologous_to=LmjF.04.0400_mRNA;ortholog_cluster=OG0006797;product=term%3DAnaphase-promoting complex%2C subunit 10 (APC10)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03256 LTnewLM_4 Pfam protein_match 127943 128566 . - . Parent=LTnewLM_040009000.1:pep;Name=PF03256;signature_desc=Anaphase-promoting complex%2C subunit 10 (APC10) ### LTnewLM_4 AUGUSTUS gene 130198 133551 1 - . ID=LTnewLM_040009100 LTnewLM_4 AUGUSTUS mRNA 130198 133551 1 - . ID=LTnewLM_040009100.1;Parent=LTnewLM_040009100 LTnewLM_4 AUGUSTUS CDS 130198 133551 1 - 0 ID=LTnewLM_040009100.1:CDS:1;Parent=LTnewLM_040009100.1 ### LTnewLM_4 . polypeptide 130198 133551 . - . ID=LTnewLM_040009100.1:pep;Derives_from=LTnewLM_040009100.1;orthologous_to=LmjF.04.0410_mRNA;ortholog_cluster=OG0006798;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 135857 136942 1 - . ID=LTnewLM_040009200 LTnewLM_4 AUGUSTUS mRNA 135857 136942 1 - . ID=LTnewLM_040009200.1;Parent=LTnewLM_040009200 LTnewLM_4 AUGUSTUS CDS 135857 136942 1 - 0 ID=LTnewLM_040009200.1:CDS:1;Parent=LTnewLM_040009200.1 ### LTnewLM_4 . polypeptide 135857 136942 . - . ID=LTnewLM_040009200.1:pep;Derives_from=LTnewLM_040009200.1;orthologous_to=LmjF.04.0420_mRNA;ortholog_cluster=OG0006799;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF07719;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 136298 136384 . - . Parent=LTnewLM_040009200.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_4 Pfam protein_match 136301 136384 . - . Parent=LTnewLM_040009200.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_4 AUGUSTUS gene 138242 150589 1 - . ID=LTnewLM_040009300 LTnewLM_4 AUGUSTUS mRNA 138242 150589 1 - . ID=LTnewLM_040009300.1;Parent=LTnewLM_040009300 LTnewLM_4 AUGUSTUS CDS 138242 150589 1 - 0 ID=LTnewLM_040009300.1:CDS:1;Parent=LTnewLM_040009300.1 ### LTnewLM_4 . polypeptide 138242 150589 . - . ID=LTnewLM_040009300.1:pep;Derives_from=LTnewLM_040009300.1;orthologous_to=LmjF.04.0430_mRNA;ortholog_cluster=OG0006800;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 154096 158112 1 - . ID=LTnewLM_040009400 LTnewLM_4 AUGUSTUS mRNA 154096 158112 1 - . ID=LTnewLM_040009400.1;Parent=LTnewLM_040009400 LTnewLM_4 AUGUSTUS CDS 154096 158112 1 - 0 ID=LTnewLM_040009400.1:CDS:1;Parent=LTnewLM_040009400.1 ### LTnewLM_4 . polypeptide 154096 158112 . - . ID=LTnewLM_040009400.1:pep;Derives_from=LTnewLM_040009400.1;orthologous_to=LmjF.04.0440_mRNA;ortholog_cluster=OG0006801;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_4 Pfam protein_match 154150 154398 . - . Parent=LTnewLM_040009400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 154165 154395 . - . Parent=LTnewLM_040009400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_4 Pfam protein_match 154516 154941 . - . Parent=LTnewLM_040009400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 154687 154938 . - . Parent=LTnewLM_040009400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_4 AUGUSTUS gene 162686 165253 1 - . ID=LTnewLM_040009500 LTnewLM_4 AUGUSTUS mRNA 162686 165253 1 - . ID=LTnewLM_040009500.1;Parent=LTnewLM_040009500 LTnewLM_4 AUGUSTUS CDS 162686 165253 1 - 0 ID=LTnewLM_040009500.1:CDS:1;Parent=LTnewLM_040009500.1 ### LTnewLM_4 . polypeptide 162686 165253 . - . ID=LTnewLM_040009500.1:pep;Derives_from=LTnewLM_040009500.1;orthologous_to=LmjF.04.0450_mRNA;ortholog_cluster=OG0006802;product=term%3DDomain of unknown function (DUF1935)/Calpain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09149|Pfam:PF00648;Ontology_term=GO:0005622,GO:0006508,GO:0004198 LTnewLM_4 Pfam protein_match 163430 164380 . - . Parent=LTnewLM_040009500.1:pep;Name=PF00648;signature_desc=Calpain family cysteine protease;Ontology_term=GO:0004198,GO:0006508,GO:0005622 LTnewLM_4 Pfam protein_match 164534 164827 . - . Parent=LTnewLM_040009500.1:pep;Name=PF09149;signature_desc=Domain of unknown function (DUF1935) ### LTnewLM_4 AUGUSTUS gene 166911 167670 1 - . ID=LTnewLM_040009600 LTnewLM_4 AUGUSTUS mRNA 166911 167670 1 - . ID=LTnewLM_040009600.1;Parent=LTnewLM_040009600 LTnewLM_4 AUGUSTUS CDS 166911 167524 1 - 2 ID=LTnewLM_040009600.1:CDS:1;Parent=LTnewLM_040009600.1 LTnewLM_4 AUGUSTUS CDS 167619 167670 1 - 0 ID=LTnewLM_040009600.1:CDS:2;Parent=LTnewLM_040009600.1 ### LTnewLM_4 . polypeptide 166911 167670 . - . ID=LTnewLM_040009600.1:pep;Derives_from=LTnewLM_040009600.1;orthologous_to=LTnewLM_060019200.1,LTnewLM_220005000.1,LmjF.06.1300_mRNA,LmjF.22.0010_mRNA;ortholog_cluster=OG0000099;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 169236 170675 1 - . ID=LTnewLM_040009700 LTnewLM_4 AUGUSTUS mRNA 169236 170675 1 - . ID=LTnewLM_040009700.1;Parent=LTnewLM_040009700 LTnewLM_4 AUGUSTUS CDS 169236 170675 1 - 0 ID=LTnewLM_040009700.1:CDS:1;Parent=LTnewLM_040009700.1 ### LTnewLM_4 . polypeptide 169236 170675 . - . ID=LTnewLM_040009700.1:pep;Derives_from=LTnewLM_040009700.1;orthologous_to=LmjF.04.0460_mRNA;ortholog_cluster=OG0006803;product=term%3DLyase/Adenylosuccinate lyase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00206|Pfam:PF08328;Ontology_term=GO:0006188,GO:0004018 LTnewLM_4 Pfam protein_match 169260 169607 . - . Parent=LTnewLM_040009700.1:pep;Name=PF08328;signature_desc=Adenylosuccinate lyase C-terminal;Ontology_term=GO:0004018,GO:0006188 LTnewLM_4 Pfam protein_match 169665 170561 . - . Parent=LTnewLM_040009700.1:pep;Name=PF00206;signature_desc=Lyase ### LTnewLM_4 . polypeptide 171421 173286 . - . ID=LTnewLM_040009800.1:pep;Derives_from=LTnewLM_040009800.1;orthologous_to=LTnewLM_040009800.2,LTnewLM_040009800.3;ortholog_cluster=OG0000486;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 . polypeptide 171421 173493 . - . ID=LTnewLM_040009800.2:pep;Derives_from=LTnewLM_040009800.2;orthologous_to=LTnewLM_040009800.1,LTnewLM_040009800.3;ortholog_cluster=OG0000486;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 171421 174081 2.68 - . ID=LTnewLM_040009800 LTnewLM_4 AUGUSTUS mRNA 171421 173286 0.68 - . ID=LTnewLM_040009800.1;Parent=LTnewLM_040009800 LTnewLM_4 AUGUSTUS CDS 171421 173286 0.68 - 0 ID=LTnewLM_040009800.1:CDS:1;Parent=LTnewLM_040009800.1 LTnewLM_4 AUGUSTUS mRNA 171421 173493 1 - . ID=LTnewLM_040009800.2;Parent=LTnewLM_040009800 LTnewLM_4 AUGUSTUS CDS 171421 173493 1 - 0 ID=LTnewLM_040009800.2:CDS:1;Parent=LTnewLM_040009800.2 LTnewLM_4 AUGUSTUS mRNA 171421 174081 1 - . ID=LTnewLM_040009800.3;Parent=LTnewLM_040009800 LTnewLM_4 AUGUSTUS CDS 171421 174081 1 - 0 ID=LTnewLM_040009800.3:CDS:1;Parent=LTnewLM_040009800.3 ### LTnewLM_4 . polypeptide 171421 174081 . - . ID=LTnewLM_040009800.3:pep;Derives_from=LTnewLM_040009800.3;orthologous_to=LTnewLM_040009800.1,LTnewLM_040009800.2;ortholog_cluster=OG0000486;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 175386 175952 1 - . ID=LTnewLM_040009900 LTnewLM_4 AUGUSTUS mRNA 175386 175952 1 - . ID=LTnewLM_040009900.1;Parent=LTnewLM_040009900 LTnewLM_4 AUGUSTUS CDS 175386 175952 1 - 0 ID=LTnewLM_040009900.1:CDS:1;Parent=LTnewLM_040009900.1 ### LTnewLM_4 . polypeptide 175386 175952 . - . ID=LTnewLM_040009900.1:pep;Derives_from=LTnewLM_040009900.1;orthologous_to=LTnewLM_220005300.1,LmjF.04.0470_mRNA,LmjF.22.0030_mRNA;ortholog_cluster=OG0000160;product=term%3DRibosomal protein L5/ribosomal L5P family C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00281|Pfam:PF00673;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_4 Pfam protein_match 175464 175757 . - . Parent=LTnewLM_040009900.1:pep;Name=PF00673;signature_desc=ribosomal L5P family C-terminus;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_4 Pfam protein_match 175770 175928 . - . Parent=LTnewLM_040009900.1:pep;Name=PF00281;signature_desc=Ribosomal protein L5;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_4 AUGUSTUS gene 176569 177141 1 - . ID=LTnewLM_040010000 LTnewLM_4 AUGUSTUS mRNA 176569 177141 1 - . ID=LTnewLM_040010000.1;Parent=LTnewLM_040010000 LTnewLM_4 AUGUSTUS CDS 176569 177141 1 - 0 ID=LTnewLM_040010000.1:CDS:1;Parent=LTnewLM_040010000.1 ### LTnewLM_4 . polypeptide 176569 177141 . - . ID=LTnewLM_040010000.1:pep;Derives_from=LTnewLM_040010000.1;orthologous_to=LmjF.04.0480_mRNA;ortholog_cluster=OG0006804;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Ras of Complex%2C Roc%2C domain of DAPkinase/Gtr1/RagA G protein conserved region/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF08477|Pfam:PF04670|Pfam:PF00071;Ontology_term=GO:0005525,GO:0005737,GO:0005634,GO:0007264,GO:0005622 LTnewLM_4 Pfam protein_match 176593 177126 . - . Parent=LTnewLM_040010000.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_4 Pfam protein_match 176749 177084 . - . Parent=LTnewLM_040010000.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_4 Pfam protein_match 176752 177096 . - . Parent=LTnewLM_040010000.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_4 Pfam protein_match 176755 177084 . - . Parent=LTnewLM_040010000.1:pep;Name=PF04670;signature_desc=Gtr1/RagA G protein conserved region;Ontology_term=GO:0005525,GO:0005634,GO:0005737 LTnewLM_4 Pfam protein_match 176758 177084 . - . Parent=LTnewLM_040010000.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_4 AUGUSTUS gene 178977 179933 1 - . ID=LTnewLM_040010100 LTnewLM_4 AUGUSTUS mRNA 178977 179933 1 - . ID=LTnewLM_040010100.1;Parent=LTnewLM_040010100 LTnewLM_4 AUGUSTUS CDS 178977 179933 1 - 0 ID=LTnewLM_040010100.1:CDS:1;Parent=LTnewLM_040010100.1 ### LTnewLM_4 . polypeptide 178977 179933 . - . ID=LTnewLM_040010100.1:pep;Derives_from=LTnewLM_040010100.1;orthologous_to=LmjF.04.0490_mRNA;ortholog_cluster=OG0006805;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 180888 189929 1 - . ID=LTnewLM_040010200 LTnewLM_4 AUGUSTUS mRNA 180888 189929 1 - . ID=LTnewLM_040010200.1;Parent=LTnewLM_040010200 LTnewLM_4 AUGUSTUS CDS 180888 189929 1 - 0 ID=LTnewLM_040010200.1:CDS:1;Parent=LTnewLM_040010200.1 ### LTnewLM_4 . polypeptide 180888 189929 . - . ID=LTnewLM_040010200.1:pep;Derives_from=LTnewLM_040010200.1;orthologous_to=LmjF.04.0500_mRNA;ortholog_cluster=OG0006806;product=term%3DNucleotidyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01909;Ontology_term=GO:0016779 LTnewLM_4 Pfam protein_match 186483 186749 . - . Parent=LTnewLM_040010200.1:pep;Name=PF01909;signature_desc=Nucleotidyltransferase domain;Ontology_term=GO:0016779 ### LTnewLM_4 AUGUSTUS gene 193151 197890 1 - . ID=LTnewLM_040010300 LTnewLM_4 AUGUSTUS mRNA 193151 197890 1 - . ID=LTnewLM_040010300.1;Parent=LTnewLM_040010300 LTnewLM_4 AUGUSTUS CDS 193151 197890 1 - 0 ID=LTnewLM_040010300.1:CDS:1;Parent=LTnewLM_040010300.1 ### LTnewLM_4 . polypeptide 193151 197890 . - . ID=LTnewLM_040010300.1:pep;Derives_from=LTnewLM_040010300.1;orthologous_to=LmjF.04.0510_mRNA;ortholog_cluster=OG0006807;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 199259 202462 1 - . ID=LTnewLM_040010400 LTnewLM_4 AUGUSTUS mRNA 199259 202462 1 - . ID=LTnewLM_040010400.1;Parent=LTnewLM_040010400 LTnewLM_4 AUGUSTUS CDS 199259 202462 1 - 0 ID=LTnewLM_040010400.1:CDS:1;Parent=LTnewLM_040010400.1 ### LTnewLM_4 . polypeptide 199259 202462 . - . ID=LTnewLM_040010400.1:pep;Derives_from=LTnewLM_040010400.1;orthologous_to=LmjF.04.0520_mRNA;ortholog_cluster=OG0006808;product=term%3DAnkyrin repeats (3 copies)/Ankyrin repeats (many copies)/Ankyrin repeat/DHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12796|Pfam:PF13857|Pfam:PF13606|Pfam:PF00023|Pfam:PF13637|Pfam:PF01529;Ontology_term=GO:0008270,GO:0005515 LTnewLM_4 Pfam protein_match 200021 200464 . - . Parent=LTnewLM_040010400.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 LTnewLM_4 Pfam protein_match 201212 201301 . - . Parent=LTnewLM_040010400.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 201218 201301 . - . Parent=LTnewLM_040010400.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 201791 201982 . - . Parent=LTnewLM_040010400.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_4 Pfam protein_match 201800 201916 . - . Parent=LTnewLM_040010400.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_4 Pfam protein_match 201803 201970 . - . Parent=LTnewLM_040010400.1:pep;Name=PF13857;signature_desc=Ankyrin repeats (many copies) LTnewLM_4 Pfam protein_match 201833 201922 . - . Parent=LTnewLM_040010400.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 201842 201922 . - . Parent=LTnewLM_040010400.1:pep;Name=PF13606;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_4 . polypeptide 203823 204866 . - . ID=LTnewLM_040010500.1:pep;Derives_from=LTnewLM_040010500.1;orthologous_to=LmjF.04.0530.1_mRNA,LmjF.04.0530.2_mRNA;ortholog_cluster=OG0000550;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 . polypeptide 203823 205152 . - . ID=LTnewLM_040010500.2:pep;Derives_from=LTnewLM_040010500.2;product=term%3Dhypothetical protein ### LTnewLM_4 . pseudogene 203823 206364 . - . ID=LTnewLM_040010500:pseudogene;coverage=0.967;sequence_ID=0.886;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.04.0530_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 203823 204976 . - . ID=LTnewLM_040010500.1;Parent=LTnewLM_040010500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 203823 204866 . - . ID=LTnewLM_040010500.1:pseudogenic_exon:1;Parent=LTnewLM_040010500.1;extra_copy_number=0 LTnewLM_4 . pseudogenic_transcript 203823 206364 . - . ID=LTnewLM_040010500.2;Parent=LTnewLM_040010500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 203823 205152 . - . ID=LTnewLM_040010500.2:pseudogenic_exon:1;Parent=LTnewLM_040010500.2;extra_copy_number=0 ### LTnewLM_4 AUGUSTUS gene 207224 208990 1 - . ID=LTnewLM_040010600 LTnewLM_4 AUGUSTUS mRNA 207224 208990 1 - . ID=LTnewLM_040010600.1;Parent=LTnewLM_040010600 LTnewLM_4 AUGUSTUS CDS 207224 208990 1 - 0 ID=LTnewLM_040010600.1:CDS:1;Parent=LTnewLM_040010600.1 ### LTnewLM_4 . polypeptide 207224 208990 . - . ID=LTnewLM_040010600.1:pep;Derives_from=LTnewLM_040010600.1;orthologous_to=LmjF.04.0540_mRNA;ortholog_cluster=OG0006809;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00097;Ontology_term=GO:0046872 LTnewLM_4 Pfam protein_match 208781 208921 . - . Parent=LTnewLM_040010600.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_4 AUGUSTUS gene 210643 215295 1 - . ID=LTnewLM_040010700 LTnewLM_4 AUGUSTUS mRNA 210643 215295 1 - . ID=LTnewLM_040010700.1;Parent=LTnewLM_040010700 LTnewLM_4 AUGUSTUS CDS 210643 215295 1 - 0 ID=LTnewLM_040010700.1:CDS:1;Parent=LTnewLM_040010700.1 ### LTnewLM_4 . polypeptide 210643 215295 . - . ID=LTnewLM_040010700.1:pep;Derives_from=LTnewLM_040010700.1;orthologous_to=LmjF.04.0550_mRNA;ortholog_cluster=OG0006810;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181|Pfam:PF13432|Pfam:PF14559|Pfam:PF07721;Ontology_term=GO:0042802,GO:0005515 LTnewLM_4 Pfam protein_match 210826 210900 . - . Parent=LTnewLM_040010700.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 211948 212124 . - . Parent=LTnewLM_040010700.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_4 Pfam protein_match 212038 212163 . - . Parent=LTnewLM_040010700.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat LTnewLM_4 Pfam protein_match 212068 212133 . - . Parent=LTnewLM_040010700.1:pep;Name=PF07721;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0042802 LTnewLM_4 Pfam protein_match 212767 212907 . - . Parent=LTnewLM_040010700.1:pep;Name=PF14559;signature_desc=Tetratricopeptide repeat LTnewLM_4 Pfam protein_match 212770 212829 . - . Parent=LTnewLM_040010700.1:pep;Name=PF07721;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0042802 LTnewLM_4 Pfam protein_match 212773 212916 . - . Parent=LTnewLM_040010700.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_4 Pfam protein_match 212947 213039 . - . Parent=LTnewLM_040010700.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_4 AUGUSTUS gene 221696 222625 1 - . ID=LTnewLM_040010800 LTnewLM_4 AUGUSTUS mRNA 221696 222625 1 - . ID=LTnewLM_040010800.1;Parent=LTnewLM_040010800 LTnewLM_4 AUGUSTUS CDS 221696 222625 1 - 0 ID=LTnewLM_040010800.1:CDS:1;Parent=LTnewLM_040010800.1 ### LTnewLM_4 . polypeptide 221696 222625 . - . ID=LTnewLM_040010800.1:pep;Derives_from=LTnewLM_040010800.1;orthologous_to=LmjF.04.0560_mRNA;ortholog_cluster=OG0006811;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03162|Pfam:PF13350 LTnewLM_4 Pfam protein_match 222158 222595 . - . Parent=LTnewLM_040010800.1:pep;Name=PF03162;signature_desc=Tyrosine phosphatase family LTnewLM_4 Pfam protein_match 222212 222370 . - . Parent=LTnewLM_040010800.1:pep;Name=PF13350;signature_desc=Tyrosine phosphatase family ### LTnewLM_4 AUGUSTUS gene 223143 227849 1 - . ID=LTnewLM_040010900 LTnewLM_4 AUGUSTUS mRNA 223143 227849 1 - . ID=LTnewLM_040010900.1;Parent=LTnewLM_040010900 LTnewLM_4 AUGUSTUS CDS 223143 227849 1 - 0 ID=LTnewLM_040010900.1:CDS:1;Parent=LTnewLM_040010900.1 ### LTnewLM_4 . polypeptide 223143 227849 . - . ID=LTnewLM_040010900.1:pep;Derives_from=LTnewLM_040010900.1;orthologous_to=LmjF.04.0570_mRNA;ortholog_cluster=OG0006812;product=term%3DDENN (AEX-3) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02141 LTnewLM_4 Pfam protein_match 226362 226628 . - . Parent=LTnewLM_040010900.1:pep;Name=PF02141;signature_desc=DENN (AEX-3) domain ### LTnewLM_4 AUGUSTUS gene 229869 230771 1 - . ID=LTnewLM_040011000 LTnewLM_4 AUGUSTUS mRNA 229869 230771 1 - . ID=LTnewLM_040011000.1;Parent=LTnewLM_040011000 LTnewLM_4 AUGUSTUS CDS 229869 230771 1 - 0 ID=LTnewLM_040011000.1:CDS:1;Parent=LTnewLM_040011000.1 ### LTnewLM_4 . polypeptide 229869 230771 . - . ID=LTnewLM_040011000.1:pep;Derives_from=LTnewLM_040011000.1;orthologous_to=LmjF.04.0580_mRNA;ortholog_cluster=OG0006813;product=term%3DSpermidine synthase tetramerisation domain/Spermine/spermidine synthase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17284|Pfam:PF01564;Ontology_term=GO:0003824 LTnewLM_4 Pfam protein_match 230004 230564 . - . Parent=LTnewLM_040011000.1:pep;Name=PF01564;signature_desc=Spermine/spermidine synthase domain;Ontology_term=GO:0003824 LTnewLM_4 Pfam protein_match 230577 230744 . - . Parent=LTnewLM_040011000.1:pep;Name=PF17284;signature_desc=Spermidine synthase tetramerisation domain ### LTnewLM_4 AUGUSTUS gene 232425 233228 1 - . ID=LTnewLM_040011100 LTnewLM_4 AUGUSTUS mRNA 232425 233228 1 - . ID=LTnewLM_040011100.1;Parent=LTnewLM_040011100 LTnewLM_4 AUGUSTUS CDS 232425 233228 1 - 0 ID=LTnewLM_040011100.1:CDS:1;Parent=LTnewLM_040011100.1 ### LTnewLM_4 . polypeptide 232425 233228 . - . ID=LTnewLM_040011100.1:pep;Derives_from=LTnewLM_040011100.1;orthologous_to=LmjF.04.0590_mRNA;ortholog_cluster=OG0006814;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 234007 243339 1 - . ID=LTnewLM_040011200 LTnewLM_4 AUGUSTUS mRNA 234007 243339 1 - . ID=LTnewLM_040011200.1;Parent=LTnewLM_040011200 LTnewLM_4 AUGUSTUS CDS 234007 243339 1 - 0 ID=LTnewLM_040011200.1:CDS:1;Parent=LTnewLM_040011200.1 ### LTnewLM_4 . polypeptide 234007 243339 . - . ID=LTnewLM_040011200.1:pep;Derives_from=LTnewLM_040011200.1;orthologous_to=LmjF.04.0600_mRNA;ortholog_cluster=OG0006815;product=term%3DAnkyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00023;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 238924 239001 . - . Parent=LTnewLM_040011200.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 ### LTnewLM_4 AUGUSTUS gene 245070 245573 1 - . ID=LTnewLM_040011300 LTnewLM_4 AUGUSTUS mRNA 245070 245573 1 - . ID=LTnewLM_040011300.1;Parent=LTnewLM_040011300 LTnewLM_4 AUGUSTUS CDS 245070 245573 1 - 0 ID=LTnewLM_040011300.1:CDS:1;Parent=LTnewLM_040011300.1 ### LTnewLM_4 . polypeptide 245070 245573 . - . ID=LTnewLM_040011300.1:pep;Derives_from=LTnewLM_040011300.1;orthologous_to=LmjF.04.0610_mRNA;ortholog_cluster=OG0006816;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 . pseudogene 246300 250199 . - . ID=LTnewLM_040011400:pseudogene;coverage=0.997;sequence_ID=0.877;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0620_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 246300 250199 . - . ID=LTnewLM_040011400.1;Parent=LTnewLM_040011400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 246300 250199 . - . ID=LTnewLM_040011400.1:pseudogenic_exon:1;Parent=LTnewLM_040011400.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 246300 250199 . - . ID=LTnewLM_040011400.1:pep;Derives_from=LTnewLM_040011400.1;orthologous_to=LmjF.04.0620_mRNA;ortholog_cluster=OG0007703;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 252649 252870 0.88 - . ID=LTnewLM_040011500 LTnewLM_4 AUGUSTUS mRNA 252649 252870 0.88 - . ID=LTnewLM_040011500.1;Parent=LTnewLM_040011500 LTnewLM_4 AUGUSTUS CDS 252649 252870 0.88 - 0 ID=LTnewLM_040011500.1:CDS:1;Parent=LTnewLM_040011500.1 ### LTnewLM_4 . polypeptide 252649 252870 . - . ID=LTnewLM_040011500.1:pep;Derives_from=LTnewLM_040011500.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 253480 254496 1 - . ID=LTnewLM_040011600 LTnewLM_4 AUGUSTUS mRNA 253480 254496 1 - . ID=LTnewLM_040011600.1;Parent=LTnewLM_040011600 LTnewLM_4 AUGUSTUS CDS 253480 254496 1 - 0 ID=LTnewLM_040011600.1:CDS:1;Parent=LTnewLM_040011600.1 ### LTnewLM_4 . polypeptide 253480 254496 . - . ID=LTnewLM_040011600.1:pep;Derives_from=LTnewLM_040011600.1;orthologous_to=LmjF.04.0625_mRNA;ortholog_cluster=OG0006817;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 255179 255781 1 - . ID=LTnewLM_040011700 LTnewLM_4 AUGUSTUS mRNA 255179 255781 1 - . ID=LTnewLM_040011700.1;Parent=LTnewLM_040011700 LTnewLM_4 AUGUSTUS CDS 255179 255781 1 - 0 ID=LTnewLM_040011700.1:CDS:1;Parent=LTnewLM_040011700.1 ### LTnewLM_4 . polypeptide 255179 255781 . - . ID=LTnewLM_040011700.1:pep;Derives_from=LTnewLM_040011700.1;orthologous_to=LmjF.04.0630_mRNA;ortholog_cluster=OG0006818;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 257209 258195 1 - . ID=LTnewLM_040011800 LTnewLM_4 AUGUSTUS mRNA 257209 258195 1 - . ID=LTnewLM_040011800.1;Parent=LTnewLM_040011800 LTnewLM_4 AUGUSTUS CDS 257209 258195 1 - 0 ID=LTnewLM_040011800.1:CDS:1;Parent=LTnewLM_040011800.1 ### LTnewLM_4 . polypeptide 257209 258195 . - . ID=LTnewLM_040011800.1:pep;Derives_from=LTnewLM_040011800.1;orthologous_to=LmjF.04.0640_mRNA;ortholog_cluster=OG0006819;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF00097;Ontology_term=GO:0046872 LTnewLM_4 Pfam protein_match 257662 257820 . - . Parent=LTnewLM_040011800.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_4 Pfam protein_match 257677 257811 . - . Parent=LTnewLM_040011800.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 ### LTnewLM_4 AUGUSTUS gene 259977 263702 1 - . ID=LTnewLM_040011900 LTnewLM_4 AUGUSTUS mRNA 259977 263702 1 - . ID=LTnewLM_040011900.1;Parent=LTnewLM_040011900 LTnewLM_4 AUGUSTUS CDS 259977 263702 1 - 0 ID=LTnewLM_040011900.1:CDS:1;Parent=LTnewLM_040011900.1 ### LTnewLM_4 . polypeptide 259977 263702 . - . ID=LTnewLM_040011900.1:pep;Derives_from=LTnewLM_040011900.1;orthologous_to=LmjF.04.0650_mRNA;ortholog_cluster=OG0006820;product=term%3DFHA domain/Protein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498|Pfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005515,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 260682 260861 . - . Parent=LTnewLM_040011900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 261246 261698 . - . Parent=LTnewLM_040011900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_4 Pfam protein_match 261249 261383 . - . Parent=LTnewLM_040011900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 262809 263198 . - . Parent=LTnewLM_040011900.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 ### LTnewLM_4 AUGUSTUS gene 264398 264847 1 - . ID=LTnewLM_040012000 LTnewLM_4 AUGUSTUS mRNA 264398 264847 1 - . ID=LTnewLM_040012000.1;Parent=LTnewLM_040012000 LTnewLM_4 AUGUSTUS CDS 264398 264847 1 - 0 ID=LTnewLM_040012000.1:CDS:1;Parent=LTnewLM_040012000.1 ### LTnewLM_4 . polypeptide 264398 264847 . - . ID=LTnewLM_040012000.1:pep;Derives_from=LTnewLM_040012000.1;orthologous_to=LmjF.04.0660_mRNA;ortholog_cluster=OG0006821;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 266524 266982 1 - . ID=LTnewLM_040012100 LTnewLM_4 AUGUSTUS mRNA 266524 266982 1 - . ID=LTnewLM_040012100.1;Parent=LTnewLM_040012100 LTnewLM_4 AUGUSTUS CDS 266524 266982 1 - 0 ID=LTnewLM_040012100.1:CDS:1;Parent=LTnewLM_040012100.1 ### LTnewLM_4 . polypeptide 266524 266982 . - . ID=LTnewLM_040012100.1:pep;Derives_from=LTnewLM_040012100.1;orthologous_to=LmjF.04.0670_mRNA;ortholog_cluster=OG0006822;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 268304 268750 1 - . ID=LTnewLM_040012200 LTnewLM_4 AUGUSTUS mRNA 268304 268750 1 - . ID=LTnewLM_040012200.1;Parent=LTnewLM_040012200 LTnewLM_4 AUGUSTUS CDS 268304 268750 1 - 0 ID=LTnewLM_040012200.1:CDS:1;Parent=LTnewLM_040012200.1 ### LTnewLM_4 . polypeptide 268304 268750 . - . ID=LTnewLM_040012200.1:pep;Derives_from=LTnewLM_040012200.1;orthologous_to=LmjF.04.0680_mRNA;ortholog_cluster=OG0006823;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_4 Pfam protein_match 268334 268738 . - . Parent=LTnewLM_040012200.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_4 AUGUSTUS gene 270654 272912 1 - . ID=LTnewLM_040012300 LTnewLM_4 AUGUSTUS mRNA 270654 272912 1 - . ID=LTnewLM_040012300.1;Parent=LTnewLM_040012300 LTnewLM_4 AUGUSTUS CDS 270654 272912 1 - 0 ID=LTnewLM_040012300.1:CDS:1;Parent=LTnewLM_040012300.1 ### LTnewLM_4 . polypeptide 270654 272912 . - . ID=LTnewLM_040012300.1:pep;Derives_from=LTnewLM_040012300.1;orthologous_to=LmjF.04.0690_mRNA;ortholog_cluster=OG0006824;product=term%3DAxonemal dynein light chain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10211 LTnewLM_4 Pfam protein_match 270768 271061 . - . Parent=LTnewLM_040012300.1:pep;Name=PF10211;signature_desc=Axonemal dynein light chain ### LTnewLM_4 . pseudogene 274026 277370 . - . ID=LTnewLM_040012400:pseudogene;coverage=0.996;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0700_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 274026 277370 . - . ID=LTnewLM_040012400.1;Parent=LTnewLM_040012400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 274026 277370 . - . ID=LTnewLM_040012400.1:pseudogenic_exon:1;Parent=LTnewLM_040012400.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 274026 277370 . - . ID=LTnewLM_040012400.1:pep;Derives_from=LTnewLM_040012400.1;orthologous_to=LmjF.04.0700_mRNA;ortholog_cluster=OG0007704;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 278307 280691 1 - . ID=LTnewLM_040012500 LTnewLM_4 AUGUSTUS mRNA 278307 280691 1 - . ID=LTnewLM_040012500.1;Parent=LTnewLM_040012500 LTnewLM_4 AUGUSTUS CDS 278307 280691 1 - 0 ID=LTnewLM_040012500.1:CDS:1;Parent=LTnewLM_040012500.1 ### LTnewLM_4 . polypeptide 278307 280691 . - . ID=LTnewLM_040012500.1:pep;Derives_from=LTnewLM_040012500.1;orthologous_to=LmjF.04.0710_mRNA;ortholog_cluster=OG0006825;product=term%3DTir chaperone protein (CesT) family/PDZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05932|Pfam:PF13180;Ontology_term=GO:0009405,GO:0005737,GO:0050708,GO:0005515 LTnewLM_4 Pfam protein_match 278334 278534 . - . Parent=LTnewLM_040012500.1:pep;Name=PF13180;signature_desc=PDZ domain;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 278931 279308 . - . Parent=LTnewLM_040012500.1:pep;Name=PF05932;signature_desc=Tir chaperone protein (CesT) family;Ontology_term=GO:0009405,GO:0050708,GO:0005737 ### LTnewLM_4 AUGUSTUS gene 284293 286461 1 - . ID=LTnewLM_040012600 LTnewLM_4 AUGUSTUS mRNA 284293 286461 1 - . ID=LTnewLM_040012600.1;Parent=LTnewLM_040012600 LTnewLM_4 AUGUSTUS CDS 284293 286461 1 - 0 ID=LTnewLM_040012600.1:CDS:1;Parent=LTnewLM_040012600.1 ### LTnewLM_4 . polypeptide 284293 286461 . - . ID=LTnewLM_040012600.1:pep;Derives_from=LTnewLM_040012600.1;orthologous_to=LmjF.04.0720_mRNA;ortholog_cluster=OG0006826;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 Liftoff gene 287547 289484 . - . ID=LTnewLM_040012700;coverage=0.992;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0730_0 LTnewLM_4 Liftoff mRNA 287547 289484 . - . ID=LTnewLM_040012700.1;Parent=LTnewLM_040012700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_4 Liftoff CDS 287547 289484 . - 0 ID=LTnewLM_040012700.1:CDS:1;Parent=LTnewLM_040012700.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 287547 289484 . - . ID=LTnewLM_040012700.1:pep;Derives_from=LTnewLM_040012700.1;orthologous_to=LmjF.04.0730_mRNA;ortholog_cluster=OG0006827;product=term%3DProtein of unknown function (DUF974)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06159 LTnewLM_4 Pfam protein_match 288207 289073 . - . Parent=LTnewLM_040012700.1:pep;Name=PF06159;signature_desc=Protein of unknown function (DUF974) ### LTnewLM_4 Liftoff gene 290068 292515 . - . ID=LTnewLM_040012800;coverage=0.991;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0740_0 LTnewLM_4 Liftoff mRNA 290068 292515 . - . ID=LTnewLM_040012800.1;Parent=LTnewLM_040012800;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_4 Liftoff CDS 290068 292515 . - 0 ID=LTnewLM_040012800.1:CDS:1;Parent=LTnewLM_040012800.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 290068 292515 . - . ID=LTnewLM_040012800.1:pep;Derives_from=LTnewLM_040012800.1;orthologous_to=LmjF.04.0740_mRNA;ortholog_cluster=OG0006828;product=term%3DWAHD domain of WASH complex%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11945 LTnewLM_4 Pfam protein_match 292096 292293 . - . Parent=LTnewLM_040012800.1:pep;Name=PF11945;signature_desc=WAHD domain of WASH complex ### LTnewLM_4 AUGUSTUS gene 293376 294017 1 - . ID=LTnewLM_040012900 LTnewLM_4 AUGUSTUS mRNA 293376 294017 1 - . ID=LTnewLM_040012900.1;Parent=LTnewLM_040012900 LTnewLM_4 AUGUSTUS CDS 293376 294017 1 - 0 ID=LTnewLM_040012900.1:CDS:1;Parent=LTnewLM_040012900.1 ### LTnewLM_4 . polypeptide 293376 294017 . - . ID=LTnewLM_040012900.1:pep;Derives_from=LTnewLM_040012900.1;orthologous_to=LTnewLM_040014900.1,LmjF.04.0750_mRNA,LmjF.04.0950_mRNA;ortholog_cluster=OG0000268;product=term%3DRibosomal protein L16p/L10e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00252;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_4 Pfam protein_match 293523 293984 . - . Parent=LTnewLM_040012900.1:pep;Name=PF00252;signature_desc=Ribosomal protein L16p/L10e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_4 . polypeptide 295075 295593 . - . ID=LTnewLM_040013000.1:pep;Derives_from=LTnewLM_040013000.1;orthologous_to=LTnewLM_040013000.2,LTnewLM_040013100.1,LmjF.04.0760_mRNA,LmjF.04.0770_mRNA;ortholog_cluster=OG0000100;product=term%3DNAC domain/HYPK UBA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01849|Pfam:PF19026 LTnewLM_4 Pfam protein_match 295084 295194 . - . Parent=LTnewLM_040013000.1:pep;Name=PF19026;signature_desc=HYPK UBA domain LTnewLM_4 Pfam protein_match 295339 295497 . - . Parent=LTnewLM_040013000.1:pep;Name=PF01849;signature_desc=NAC domain ### LTnewLM_4 AUGUSTUS gene 295075 295806 1.51 - . ID=LTnewLM_040013000 LTnewLM_4 AUGUSTUS mRNA 295075 295593 1 - . ID=LTnewLM_040013000.1;Parent=LTnewLM_040013000 LTnewLM_4 AUGUSTUS CDS 295075 295593 1 - 0 ID=LTnewLM_040013000.1:CDS:1;Parent=LTnewLM_040013000.1 LTnewLM_4 AUGUSTUS mRNA 295075 295806 0.51 - . ID=LTnewLM_040013000.2;Parent=LTnewLM_040013000 LTnewLM_4 AUGUSTUS CDS 295075 295572 0.51 - 0 ID=LTnewLM_040013000.2:CDS:1;Parent=LTnewLM_040013000.2 LTnewLM_4 AUGUSTUS CDS 295798 295806 0.68 - 0 ID=LTnewLM_040013000.2:CDS:2;Parent=LTnewLM_040013000.2 ### LTnewLM_4 . polypeptide 295075 295806 . - . ID=LTnewLM_040013000.2:pep;Derives_from=LTnewLM_040013000.2;orthologous_to=LTnewLM_040013000.1,LTnewLM_040013100.1,LmjF.04.0760_mRNA,LmjF.04.0770_mRNA;ortholog_cluster=OG0000100;product=term%3DNAC domain/HYPK UBA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01849|Pfam:PF19026 LTnewLM_4 Pfam protein_match 295309 295419 . - . Parent=LTnewLM_040013000.2:pep;Name=PF19026;signature_desc=HYPK UBA domain LTnewLM_4 Pfam protein_match 295564 295722 . - . Parent=LTnewLM_040013000.2:pep;Name=PF01849;signature_desc=NAC domain ### LTnewLM_4 AUGUSTUS gene 296856 297374 1 - . ID=LTnewLM_040013100 LTnewLM_4 AUGUSTUS mRNA 296856 297374 1 - . ID=LTnewLM_040013100.1;Parent=LTnewLM_040013100 LTnewLM_4 AUGUSTUS CDS 296856 297374 1 - 0 ID=LTnewLM_040013100.1:CDS:1;Parent=LTnewLM_040013100.1 ### LTnewLM_4 . polypeptide 296856 297374 . - . ID=LTnewLM_040013100.1:pep;Derives_from=LTnewLM_040013100.1;orthologous_to=LTnewLM_040013000.1,LTnewLM_040013000.2,LmjF.04.0760_mRNA,LmjF.04.0770_mRNA;ortholog_cluster=OG0000100;product=term%3DNAC domain/HYPK UBA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01849|Pfam:PF19026 LTnewLM_4 Pfam protein_match 296865 296975 . - . Parent=LTnewLM_040013100.1:pep;Name=PF19026;signature_desc=HYPK UBA domain LTnewLM_4 Pfam protein_match 297120 297278 . - . Parent=LTnewLM_040013100.1:pep;Name=PF01849;signature_desc=NAC domain ### LTnewLM_4 AUGUSTUS gene 298066 299787 1 - . ID=LTnewLM_040013200 LTnewLM_4 AUGUSTUS mRNA 298066 299787 1 - . ID=LTnewLM_040013200.1;Parent=LTnewLM_040013200 LTnewLM_4 AUGUSTUS CDS 298066 299787 1 - 0 ID=LTnewLM_040013200.1:CDS:1;Parent=LTnewLM_040013200.1 ### LTnewLM_4 . polypeptide 298066 299787 . - . ID=LTnewLM_040013200.1:pep;Derives_from=LTnewLM_040013200.1;orthologous_to=LmjF.04.0780_mRNA;ortholog_cluster=OG0006829;product=term%3DDnaJ domain/Transmembrane Fragile-X-F protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF10269 LTnewLM_4 Pfam protein_match 298660 299424 . - . Parent=LTnewLM_040013200.1:pep;Name=PF10269;signature_desc=Transmembrane Fragile-X-F protein LTnewLM_4 Pfam protein_match 299584 299760 . - . Parent=LTnewLM_040013200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_4 AUGUSTUS gene 300789 304193 1 - . ID=LTnewLM_040013300 LTnewLM_4 AUGUSTUS mRNA 300789 304193 1 - . ID=LTnewLM_040013300.1;Parent=LTnewLM_040013300 LTnewLM_4 AUGUSTUS CDS 300789 304193 1 - 0 ID=LTnewLM_040013300.1:CDS:1;Parent=LTnewLM_040013300.1 ### LTnewLM_4 . polypeptide 300789 304193 . - . ID=LTnewLM_040013300.1:pep;Derives_from=LTnewLM_040013300.1;orthologous_to=LmjF.04.0790_mRNA;ortholog_cluster=OG0006830;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 305630 306550 1 - . ID=LTnewLM_040013400 LTnewLM_4 AUGUSTUS mRNA 305630 306550 1 - . ID=LTnewLM_040013400.1;Parent=LTnewLM_040013400 LTnewLM_4 AUGUSTUS CDS 305630 306550 1 - 0 ID=LTnewLM_040013400.1:CDS:1;Parent=LTnewLM_040013400.1 ### LTnewLM_4 . polypeptide 305630 306550 . - . ID=LTnewLM_040013400.1:pep;Derives_from=LTnewLM_040013400.1;orthologous_to=LmjF.04.0800_mRNA;ortholog_cluster=OG0006831;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 307630 309645 1 - . ID=LTnewLM_040013500 LTnewLM_4 AUGUSTUS mRNA 307630 309645 1 - . ID=LTnewLM_040013500.1;Parent=LTnewLM_040013500 LTnewLM_4 AUGUSTUS CDS 307630 309645 1 - 0 ID=LTnewLM_040013500.1:CDS:1;Parent=LTnewLM_040013500.1 ### LTnewLM_4 . polypeptide 307630 309645 . - . ID=LTnewLM_040013500.1:pep;Derives_from=LTnewLM_040013500.1;orthologous_to=LmjF.04.0810_mRNA;ortholog_cluster=OG0006832;product=term%3DPescadillo N-terminus/BRCA1 C Terminus (BRCT) domain/BRCT domain%2C a BRCA1 C-terminus domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06732|Pfam:PF00533|Pfam:PF16589;Ontology_term=GO:0042254,GO:0005730 LTnewLM_4 Pfam protein_match 308443 308688 . - . Parent=LTnewLM_040013500.1:pep;Name=PF16589;signature_desc=BRCT domain%2C a BRCA1 C-terminus domain LTnewLM_4 Pfam protein_match 308479 308688 . - . Parent=LTnewLM_040013500.1:pep;Name=PF00533;signature_desc=BRCA1 C Terminus (BRCT) domain LTnewLM_4 Pfam protein_match 308824 309609 . - . Parent=LTnewLM_040013500.1:pep;Name=PF06732;signature_desc=Pescadillo N-terminus;Ontology_term=GO:0042254,GO:0005730 ### LTnewLM_4 . pseudogene 310348 311866 . - . ID=LTnewLM_040013600:pseudogene;coverage=0.994;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0820_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 310348 311866 . - . ID=LTnewLM_040013600.1;Parent=LTnewLM_040013600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 310348 311866 . - . ID=LTnewLM_040013600.1:pseudogenic_exon:1;Parent=LTnewLM_040013600.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 310348 311866 . - . ID=LTnewLM_040013600.1:pep;Derives_from=LTnewLM_040013600.1;orthologous_to=LmjF.04.0820_mRNA;ortholog_cluster=OG0007705;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 312494 316669 1 - . ID=LTnewLM_040013700 LTnewLM_4 AUGUSTUS mRNA 312494 316669 1 - . ID=LTnewLM_040013700.1;Parent=LTnewLM_040013700 LTnewLM_4 AUGUSTUS CDS 312494 316669 1 - 0 ID=LTnewLM_040013700.1:CDS:1;Parent=LTnewLM_040013700.1 ### LTnewLM_4 . polypeptide 312494 316669 . - . ID=LTnewLM_040013700.1:pep;Derives_from=LTnewLM_040013700.1;orthologous_to=LmjF.04.0830_mRNA;ortholog_cluster=OG0006833;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 317949 320585 1 - . ID=LTnewLM_040013800 LTnewLM_4 AUGUSTUS mRNA 317949 320585 1 - . ID=LTnewLM_040013800.1;Parent=LTnewLM_040013800 LTnewLM_4 AUGUSTUS CDS 317949 320585 1 - 0 ID=LTnewLM_040013800.1:CDS:1;Parent=LTnewLM_040013800.1 ### LTnewLM_4 . polypeptide 317949 320585 . - . ID=LTnewLM_040013800.1:pep;Derives_from=LTnewLM_040013800.1;orthologous_to=LmjF.04.0840_mRNA;ortholog_cluster=OG0006834;product=term%3DTyrosine phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03162 LTnewLM_4 Pfam protein_match 318960 319433 . - . Parent=LTnewLM_040013800.1:pep;Name=PF03162;signature_desc=Tyrosine phosphatase family ### LTnewLM_4 AUGUSTUS gene 322050 323240 1 - . ID=LTnewLM_040013900 LTnewLM_4 AUGUSTUS mRNA 322050 323240 1 - . ID=LTnewLM_040013900.1;Parent=LTnewLM_040013900 LTnewLM_4 AUGUSTUS CDS 322050 323240 1 - 0 ID=LTnewLM_040013900.1:CDS:1;Parent=LTnewLM_040013900.1 ### LTnewLM_4 . polypeptide 322050 323240 . - . ID=LTnewLM_040013900.1:pep;Derives_from=LTnewLM_040013900.1;orthologous_to=LmjF.04.0850_mRNA;ortholog_cluster=OG0006835;product=term%3DRhomboid family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01694;Ontology_term=GO:0004252,GO:0016021 LTnewLM_4 Pfam protein_match 322107 322535 . - . Parent=LTnewLM_040013900.1:pep;Name=PF01694;signature_desc=Rhomboid family;Ontology_term=GO:0004252,GO:0016021 ### LTnewLM_4 . pseudogene 323985 325119 . - . ID=LTnewLM_040014000:pseudogene;coverage=0.917;sequence_ID=0.854;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0860_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 323985 325119 . - . ID=LTnewLM_040014000.1;Parent=LTnewLM_040014000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 323985 325119 . - . ID=LTnewLM_040014000.1:pseudogenic_exon:1;Parent=LTnewLM_040014000.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 323985 325119 . - . ID=LTnewLM_040014000.1:pep;Derives_from=LTnewLM_040014000.1;orthologous_to=LmjF.04.0860_mRNA;ortholog_cluster=OG0007706;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 328305 332021 1 - . ID=LTnewLM_040014100 LTnewLM_4 AUGUSTUS mRNA 328305 332021 1 - . ID=LTnewLM_040014100.1;Parent=LTnewLM_040014100 LTnewLM_4 AUGUSTUS CDS 328305 332021 1 - 0 ID=LTnewLM_040014100.1:CDS:1;Parent=LTnewLM_040014100.1 ### LTnewLM_4 . polypeptide 328305 332021 . - . ID=LTnewLM_040014100.1:pep;Derives_from=LTnewLM_040014100.1;orthologous_to=LmjF.04.0870_mRNA;ortholog_cluster=OG0006836;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 333803 334327 1 - . ID=LTnewLM_040014200 LTnewLM_4 AUGUSTUS mRNA 333803 334327 1 - . ID=LTnewLM_040014200.1;Parent=LTnewLM_040014200 LTnewLM_4 AUGUSTUS CDS 333803 334327 1 - 0 ID=LTnewLM_040014200.1:CDS:1;Parent=LTnewLM_040014200.1 ### LTnewLM_4 . polypeptide 333803 334327 . - . ID=LTnewLM_040014200.1:pep;Derives_from=LTnewLM_040014200.1;orthologous_to=LmjF.04.0880_mRNA;ortholog_cluster=OG0006837;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 . pseudogene 336193 340037 . - . ID=LTnewLM_040014300:pseudogene;coverage=0.994;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0890_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 336193 340037 . - . ID=LTnewLM_040014300.1;Parent=LTnewLM_040014300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 336193 340037 . - . ID=LTnewLM_040014300.1:pseudogenic_exon:1;Parent=LTnewLM_040014300.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 336193 340037 . - . ID=LTnewLM_040014300.1:pep;Derives_from=LTnewLM_040014300.1;orthologous_to=LmjF.04.0890_mRNA;ortholog_cluster=OG0007707;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181;Ontology_term=GO:0005515 LTnewLM_4 Pfam protein_match 339444 339533 . - . Parent=LTnewLM_040014300.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_4 AUGUSTUS gene 341441 347065 1 - . ID=LTnewLM_040014400 LTnewLM_4 AUGUSTUS mRNA 341441 347065 1 - . ID=LTnewLM_040014400.1;Parent=LTnewLM_040014400 LTnewLM_4 AUGUSTUS CDS 341441 347065 1 - 0 ID=LTnewLM_040014400.1:CDS:1;Parent=LTnewLM_040014400.1 ### LTnewLM_4 . polypeptide 341441 347065 . - . ID=LTnewLM_040014400.1:pep;Derives_from=LTnewLM_040014400.1;orthologous_to=LmjF.04.0900_mRNA;ortholog_cluster=OG0006838;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 349295 350041 1 - . ID=LTnewLM_040014500 LTnewLM_4 AUGUSTUS mRNA 349295 350041 1 - . ID=LTnewLM_040014500.1;Parent=LTnewLM_040014500 LTnewLM_4 AUGUSTUS CDS 349295 350041 1 - 0 ID=LTnewLM_040014500.1:CDS:1;Parent=LTnewLM_040014500.1 ### LTnewLM_4 . polypeptide 349295 350041 . - . ID=LTnewLM_040014500.1:pep;Derives_from=LTnewLM_040014500.1;orthologous_to=LmjF.04.0910_mRNA;ortholog_cluster=OG0006839;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 . pseudogene 351615 353404 . - . ID=LTnewLM_040014600:pseudogene;coverage=0.993;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.0920_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 351615 353404 . - . ID=LTnewLM_040014600.1;Parent=LTnewLM_040014600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 351615 353404 . - . ID=LTnewLM_040014600.1:pseudogenic_exon:1;Parent=LTnewLM_040014600.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 351615 353404 . - . ID=LTnewLM_040014600.1:pep;Derives_from=LTnewLM_040014600.1;orthologous_to=LmjF.04.0920_mRNA;ortholog_cluster=OG0007708;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 355775 356221 1 - . ID=LTnewLM_040014700 LTnewLM_4 AUGUSTUS mRNA 355775 356221 1 - . ID=LTnewLM_040014700.1;Parent=LTnewLM_040014700 LTnewLM_4 AUGUSTUS CDS 355775 356221 1 - 0 ID=LTnewLM_040014700.1:CDS:1;Parent=LTnewLM_040014700.1 ### LTnewLM_4 . polypeptide 355775 356221 . - . ID=LTnewLM_040014700.1:pep;Derives_from=LTnewLM_040014700.1;orthologous_to=LmjF.04.0930_mRNA;ortholog_cluster=OG0006840;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 358085 359566 1 - . ID=LTnewLM_040014800 LTnewLM_4 AUGUSTUS mRNA 358085 359566 1 - . ID=LTnewLM_040014800.1;Parent=LTnewLM_040014800 LTnewLM_4 AUGUSTUS CDS 358085 359566 1 - 0 ID=LTnewLM_040014800.1:CDS:1;Parent=LTnewLM_040014800.1 ### LTnewLM_4 . polypeptide 358085 359566 . - . ID=LTnewLM_040014800.1:pep;Derives_from=LTnewLM_040014800.1;orthologous_to=LmjF.04.0940_mRNA;ortholog_cluster=OG0006841;product=term%3DDnaJ domain/DnaJ C terminal domain/DnaJ central domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226|Pfam:PF01556|Pfam:PF00684;Ontology_term=GO:0031072,GO:0051082 LTnewLM_4 Pfam protein_match 358214 358852 . - . Parent=LTnewLM_040014800.1:pep;Name=PF01556;signature_desc=DnaJ C terminal domain LTnewLM_4 Pfam protein_match 358592 358771 . - . Parent=LTnewLM_040014800.1:pep;Name=PF00684;signature_desc=DnaJ central domain;Ontology_term=GO:0031072,GO:0051082 LTnewLM_4 Pfam protein_match 359111 359293 . - . Parent=LTnewLM_040014800.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_4 AUGUSTUS gene 361046 361687 1 - . ID=LTnewLM_040014900 LTnewLM_4 AUGUSTUS mRNA 361046 361687 1 - . ID=LTnewLM_040014900.1;Parent=LTnewLM_040014900 LTnewLM_4 AUGUSTUS CDS 361046 361687 1 - 0 ID=LTnewLM_040014900.1:CDS:1;Parent=LTnewLM_040014900.1 ### LTnewLM_4 . polypeptide 361046 361687 . - . ID=LTnewLM_040014900.1:pep;Derives_from=LTnewLM_040014900.1;orthologous_to=LTnewLM_040012900.1,LmjF.04.0750_mRNA,LmjF.04.0950_mRNA;ortholog_cluster=OG0000268;product=term%3DRibosomal protein L16p/L10e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00252;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_4 Pfam protein_match 361193 361654 . - . Parent=LTnewLM_040014900.1:pep;Name=PF00252;signature_desc=Ribosomal protein L16p/L10e;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_4 AUGUSTUS gene 362590 363219 1 - . ID=LTnewLM_040015000 LTnewLM_4 AUGUSTUS mRNA 362590 363219 1 - . ID=LTnewLM_040015000.1;Parent=LTnewLM_040015000 LTnewLM_4 AUGUSTUS CDS 362590 363219 1 - 0 ID=LTnewLM_040015000.1:CDS:1;Parent=LTnewLM_040015000.1 ### LTnewLM_4 . polypeptide 362590 363219 . - . ID=LTnewLM_040015000.1:pep;Derives_from=LTnewLM_040015000.1;orthologous_to=LmjF.04.0960_mRNA;ortholog_cluster=OG0006842;product=term%3DAdenylate kinase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00406|Pfam:PF13207 LTnewLM_4 Pfam protein_match 362692 363159 . - . Parent=LTnewLM_040015000.1:pep;Name=PF00406;signature_desc=Adenylate kinase LTnewLM_4 Pfam protein_match 362755 363156 . - . Parent=LTnewLM_040015000.1:pep;Name=PF13207;signature_desc=AAA domain ### LTnewLM_4 AUGUSTUS gene 364138 365703 1 - . ID=LTnewLM_040015100 LTnewLM_4 AUGUSTUS mRNA 364138 365703 1 - . ID=LTnewLM_040015100.1;Parent=LTnewLM_040015100 LTnewLM_4 AUGUSTUS CDS 364138 365703 1 - 0 ID=LTnewLM_040015100.1:CDS:1;Parent=LTnewLM_040015100.1 ### LTnewLM_4 . polypeptide 364138 365703 . - . ID=LTnewLM_040015100.1:pep;Derives_from=LTnewLM_040015100.1;orthologous_to=LmjF.04.0970_mRNA;ortholog_cluster=OG0006843;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 366491 367936 1 - . ID=LTnewLM_040015200 LTnewLM_4 AUGUSTUS mRNA 366491 367936 1 - . ID=LTnewLM_040015200.1;Parent=LTnewLM_040015200 LTnewLM_4 AUGUSTUS CDS 366491 367936 1 - 0 ID=LTnewLM_040015200.1:CDS:1;Parent=LTnewLM_040015200.1 ### LTnewLM_4 . polypeptide 366491 367936 . - . ID=LTnewLM_040015200.1:pep;Derives_from=LTnewLM_040015200.1;orthologous_to=LmjF.04.0975_mRNA;ortholog_cluster=OG0006844;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 368468 372193 1 - . ID=LTnewLM_040015300 LTnewLM_4 AUGUSTUS mRNA 368468 372193 1 - . ID=LTnewLM_040015300.1;Parent=LTnewLM_040015300 LTnewLM_4 AUGUSTUS CDS 368468 372193 1 - 0 ID=LTnewLM_040015300.1:CDS:1;Parent=LTnewLM_040015300.1 ### LTnewLM_4 . polypeptide 368468 372193 . - . ID=LTnewLM_040015300.1:pep;Derives_from=LTnewLM_040015300.1;orthologous_to=LmjF.04.0980_mRNA;ortholog_cluster=OG0006845;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 372868 373725 1 - . ID=LTnewLM_040015400 LTnewLM_4 AUGUSTUS mRNA 372868 373725 1 - . ID=LTnewLM_040015400.1;Parent=LTnewLM_040015400 LTnewLM_4 AUGUSTUS CDS 372868 373725 1 - 0 ID=LTnewLM_040015400.1:CDS:1;Parent=LTnewLM_040015400.1 ### LTnewLM_4 . polypeptide 372868 373725 . - . ID=LTnewLM_040015400.1:pep;Derives_from=LTnewLM_040015400.1;orthologous_to=LmjF.04.0990_mRNA;ortholog_cluster=OG0006846;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 374669 378205 1 - . ID=LTnewLM_040015500 LTnewLM_4 AUGUSTUS mRNA 374669 378205 1 - . ID=LTnewLM_040015500.1;Parent=LTnewLM_040015500 LTnewLM_4 AUGUSTUS CDS 374669 378205 1 - 0 ID=LTnewLM_040015500.1:CDS:1;Parent=LTnewLM_040015500.1 ### LTnewLM_4 . polypeptide 374669 378205 . - . ID=LTnewLM_040015500.1:pep;Derives_from=LTnewLM_040015500.1;orthologous_to=LmjF.04.1000_mRNA;ortholog_cluster=OG0006847;product=term%3DVoltage gated chloride channel%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00654;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020 LTnewLM_4 Pfam protein_match 376286 377590 . - . Parent=LTnewLM_040015500.1:pep;Name=PF00654;signature_desc=Voltage gated chloride channel;Ontology_term=GO:0005247,GO:0006821,GO:0055085,GO:0016020 ### LTnewLM_4 AUGUSTUS gene 379786 380454 1 - . ID=LTnewLM_040015600 LTnewLM_4 AUGUSTUS mRNA 379786 380454 1 - . ID=LTnewLM_040015600.1;Parent=LTnewLM_040015600 LTnewLM_4 AUGUSTUS CDS 379786 380454 1 - 0 ID=LTnewLM_040015600.1:CDS:1;Parent=LTnewLM_040015600.1 ### LTnewLM_4 . polypeptide 379786 380454 . - . ID=LTnewLM_040015600.1:pep;Derives_from=LTnewLM_040015600.1;orthologous_to=LmjF.04.1010_mRNA;ortholog_cluster=OG0006848;product=term%3DrRNA biogenesis protein RRP36%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06102 LTnewLM_4 Pfam protein_match 379792 380406 . - . Parent=LTnewLM_040015600.1:pep;Name=PF06102;signature_desc=rRNA biogenesis protein RRP36 ### LTnewLM_4 . pseudogene 381013 381723 . - . ID=LTnewLM_040015700:pseudogene;coverage=0.940;sequence_ID=0.715;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.1020_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 381013 381723 . - . ID=LTnewLM_040015700.1;Parent=LTnewLM_040015700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 381013 381723 . - . ID=LTnewLM_040015700.1:pseudogenic_exon:1;Parent=LTnewLM_040015700.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 381013 381723 . - . ID=LTnewLM_040015700.1:pep;Derives_from=LTnewLM_040015700.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 381880 382464 1 - . ID=LTnewLM_040015800 LTnewLM_4 AUGUSTUS mRNA 381880 382464 1 - . ID=LTnewLM_040015800.1;Parent=LTnewLM_040015800 LTnewLM_4 AUGUSTUS CDS 381880 382464 1 - 0 ID=LTnewLM_040015800.1:CDS:1;Parent=LTnewLM_040015800.1 ### LTnewLM_4 . polypeptide 381880 382464 . - . ID=LTnewLM_040015800.1:pep;Derives_from=LTnewLM_040015800.1;orthologous_to=LmjF.04.1030_mRNA;ortholog_cluster=OG0006849;product=term%3DCOPI associated protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08507 LTnewLM_4 Pfam protein_match 382033 382389 . - . Parent=LTnewLM_040015800.1:pep;Name=PF08507;signature_desc=COPI associated protein ### LTnewLM_4 . pseudogene 384601 385756 . - . ID=LTnewLM_040015900:pseudogene;coverage=0.993;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.04.1040_0;has_internal_stop=true LTnewLM_4 . pseudogenic_transcript 384601 385756 . - . ID=LTnewLM_040015900.1;Parent=LTnewLM_040015900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_4 . pseudogenic_exon 384601 385756 . - . ID=LTnewLM_040015900.1:pseudogenic_exon:1;Parent=LTnewLM_040015900.1;extra_copy_number=0 ### LTnewLM_4 . polypeptide 384601 385756 . - . ID=LTnewLM_040015900.1:pep;Derives_from=LTnewLM_040015900.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 387516 388586 1 - . ID=LTnewLM_040016000 LTnewLM_4 AUGUSTUS mRNA 387516 388586 1 - . ID=LTnewLM_040016000.1;Parent=LTnewLM_040016000 LTnewLM_4 AUGUSTUS CDS 387516 388586 1 - 0 ID=LTnewLM_040016000.1:CDS:1;Parent=LTnewLM_040016000.1 ### LTnewLM_4 . polypeptide 387516 388586 . - . ID=LTnewLM_040016000.1:pep;Derives_from=LTnewLM_040016000.1;orthologous_to=LmjF.04.1040_mRNA,LmjF.04.1050_mRNA;ortholog_cluster=OG0000487;product=term%3DAcyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01553;Ontology_term=GO:0016746,GO:0008152 LTnewLM_4 Pfam protein_match 387816 388184 . - . Parent=LTnewLM_040016000.1:pep;Name=PF01553;signature_desc=Acyltransferase;Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_4 AUGUSTUS gene 389754 391211 1 - . ID=LTnewLM_040016100 LTnewLM_4 AUGUSTUS mRNA 389754 391211 1 - . ID=LTnewLM_040016100.1;Parent=LTnewLM_040016100 LTnewLM_4 AUGUSTUS CDS 389754 391211 1 - 0 ID=LTnewLM_040016100.1:CDS:1;Parent=LTnewLM_040016100.1 ### LTnewLM_4 . polypeptide 389754 391211 . - . ID=LTnewLM_040016100.1:pep;Derives_from=LTnewLM_040016100.1;orthologous_to=LmjF.04.1060_mRNA;ortholog_cluster=OG0006850;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 391683 392072 1 - . ID=LTnewLM_040016200 LTnewLM_4 AUGUSTUS mRNA 391683 392072 1 - . ID=LTnewLM_040016200.1;Parent=LTnewLM_040016200 LTnewLM_4 AUGUSTUS CDS 391683 392072 1 - 0 ID=LTnewLM_040016200.1:CDS:1;Parent=LTnewLM_040016200.1 ### LTnewLM_4 . polypeptide 391683 392072 . - . ID=LTnewLM_040016200.1:pep;Derives_from=LTnewLM_040016200.1;orthologous_to=LmjF.04.1070_mRNA;ortholog_cluster=OG0006851;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 392836 395466 1 - . ID=LTnewLM_040016300 LTnewLM_4 AUGUSTUS mRNA 392836 395466 1 - . ID=LTnewLM_040016300.1;Parent=LTnewLM_040016300 LTnewLM_4 AUGUSTUS CDS 392836 395466 1 - 0 ID=LTnewLM_040016300.1:CDS:1;Parent=LTnewLM_040016300.1 ### LTnewLM_4 . polypeptide 392836 395466 . - . ID=LTnewLM_040016300.1:pep;Derives_from=LTnewLM_040016300.1;orthologous_to=LmjF.04.1080_mRNA;ortholog_cluster=OG0006852;product=term%3DTranscriptional repressor TCF25%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04910 LTnewLM_4 Pfam protein_match 393385 394383 . - . Parent=LTnewLM_040016300.1:pep;Name=PF04910;signature_desc=Transcriptional repressor TCF25 ### LTnewLM_4 AUGUSTUS gene 396292 400707 1 - . ID=LTnewLM_040016400 LTnewLM_4 AUGUSTUS mRNA 396292 400707 1 - . ID=LTnewLM_040016400.1;Parent=LTnewLM_040016400 LTnewLM_4 AUGUSTUS CDS 396292 400707 1 - 0 ID=LTnewLM_040016400.1:CDS:1;Parent=LTnewLM_040016400.1 ### LTnewLM_4 . polypeptide 396292 400707 . - . ID=LTnewLM_040016400.1:pep;Derives_from=LTnewLM_040016400.1;orthologous_to=LmjF.04.1090_mRNA;ortholog_cluster=OG0006853;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 402248 402577 1 - . ID=LTnewLM_040016500 LTnewLM_4 AUGUSTUS mRNA 402248 402577 1 - . ID=LTnewLM_040016500.1;Parent=LTnewLM_040016500 LTnewLM_4 AUGUSTUS CDS 402248 402577 1 - 0 ID=LTnewLM_040016500.1:CDS:1;Parent=LTnewLM_040016500.1 ### LTnewLM_4 . polypeptide 402248 402577 . - . ID=LTnewLM_040016500.1:pep;Derives_from=LTnewLM_040016500.1;orthologous_to=LmjF.04.1100_mRNA;ortholog_cluster=OG0006854;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 403187 406060 1 - . ID=LTnewLM_040016600 LTnewLM_4 AUGUSTUS mRNA 403187 406060 1 - . ID=LTnewLM_040016600.1;Parent=LTnewLM_040016600 LTnewLM_4 AUGUSTUS CDS 403187 406060 1 - 0 ID=LTnewLM_040016600.1:CDS:1;Parent=LTnewLM_040016600.1 ### LTnewLM_4 . polypeptide 403187 406060 . - . ID=LTnewLM_040016600.1:pep;Derives_from=LTnewLM_040016600.1;orthologous_to=LmjF.04.1110_mRNA;ortholog_cluster=OG0006855;product=term%3DE1-E2 ATPase/haloacid dehalogenase-like hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00122|Pfam:PF00702;Ontology_term=GO:0000166,GO:0046872 LTnewLM_4 Pfam protein_match 404249 404362 . - . Parent=LTnewLM_040016600.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_4 Pfam protein_match 405152 405691 . - . Parent=LTnewLM_040016600.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 ### LTnewLM_4 AUGUSTUS gene 407965 410145 1 - . ID=LTnewLM_040016700 LTnewLM_4 AUGUSTUS mRNA 407965 410145 1 - . ID=LTnewLM_040016700.1;Parent=LTnewLM_040016700 LTnewLM_4 AUGUSTUS CDS 407965 410145 1 - 0 ID=LTnewLM_040016700.1:CDS:1;Parent=LTnewLM_040016700.1 ### LTnewLM_4 . polypeptide 407965 410145 . - . ID=LTnewLM_040016700.1:pep;Derives_from=LTnewLM_040016700.1;orthologous_to=LmjF.04.1120_mRNA;ortholog_cluster=OG0006856;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 411149 412081 1 - . ID=LTnewLM_040016800 LTnewLM_4 AUGUSTUS mRNA 411149 412081 1 - . ID=LTnewLM_040016800.1;Parent=LTnewLM_040016800 LTnewLM_4 AUGUSTUS CDS 411149 412081 1 - 0 ID=LTnewLM_040016800.1:CDS:1;Parent=LTnewLM_040016800.1 ### LTnewLM_4 . polypeptide 411149 412081 . - . ID=LTnewLM_040016800.1:pep;Derives_from=LTnewLM_040016800.1;orthologous_to=LmjF.04.1130_mRNA;ortholog_cluster=OG0006857;product=term%3DSCO1/SenC%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02630 LTnewLM_4 Pfam protein_match 411254 411667 . - . Parent=LTnewLM_040016800.1:pep;Name=PF02630;signature_desc=SCO1/SenC ### LTnewLM_4 AUGUSTUS gene 412900 413802 1 - . ID=LTnewLM_040016900 LTnewLM_4 AUGUSTUS mRNA 412900 413802 1 - . ID=LTnewLM_040016900.1;Parent=LTnewLM_040016900 LTnewLM_4 AUGUSTUS CDS 412900 413802 1 - 0 ID=LTnewLM_040016900.1:CDS:1;Parent=LTnewLM_040016900.1 ### LTnewLM_4 . polypeptide 412900 413802 . - . ID=LTnewLM_040016900.1:pep;Derives_from=LTnewLM_040016900.1;orthologous_to=LmjF.04.1140_mRNA;ortholog_cluster=OG0006858;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 414506 415012 1 - . ID=LTnewLM_040017000 LTnewLM_4 AUGUSTUS mRNA 414506 415012 1 - . ID=LTnewLM_040017000.1;Parent=LTnewLM_040017000 LTnewLM_4 AUGUSTUS CDS 414506 415012 1 - 0 ID=LTnewLM_040017000.1:CDS:1;Parent=LTnewLM_040017000.1 ### LTnewLM_4 . polypeptide 414506 415012 . - . ID=LTnewLM_040017000.1:pep;Derives_from=LTnewLM_040017000.1;orthologous_to=LmjF.04.1150_mRNA;ortholog_cluster=OG0006859;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 417196 418251 1 - . ID=LTnewLM_040017100 LTnewLM_4 AUGUSTUS mRNA 417196 418251 1 - . ID=LTnewLM_040017100.1;Parent=LTnewLM_040017100 LTnewLM_4 AUGUSTUS CDS 417196 418251 1 - 0 ID=LTnewLM_040017100.1:CDS:1;Parent=LTnewLM_040017100.1 ### LTnewLM_4 . polypeptide 417196 418251 . - . ID=LTnewLM_040017100.1:pep;Derives_from=LTnewLM_040017100.1;orthologous_to=LmjF.04.1160_mRNA;ortholog_cluster=OG0006860;product=term%3DFructose-1-6-bisphosphatase%2C N-terminal domain/Fructose-1-6-bisphosphatase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00316|Pfam:PF18913;Ontology_term=GO:0042132,GO:0042578,GO:0005975 LTnewLM_4 Pfam protein_match 417256 417630 . - . Parent=LTnewLM_040017100.1:pep;Name=PF18913;signature_desc=Fructose-1-6-bisphosphatase%2C C-terminal domain LTnewLM_4 Pfam protein_match 417643 418221 . - . Parent=LTnewLM_040017100.1:pep;Name=PF00316;signature_desc=Fructose-1-6-bisphosphatase%2C N-terminal domain;Ontology_term=GO:0042132,GO:0042578,GO:0005975 ### LTnewLM_4 AUGUSTUS gene 419007 419721 1 - . ID=LTnewLM_040017200 LTnewLM_4 AUGUSTUS mRNA 419007 419721 1 - . ID=LTnewLM_040017200.1;Parent=LTnewLM_040017200 LTnewLM_4 AUGUSTUS CDS 419007 419085 1 - 1 ID=LTnewLM_040017200.1:CDS:1;Parent=LTnewLM_040017200.1 LTnewLM_4 AUGUSTUS CDS 419168 419721 1 - 0 ID=LTnewLM_040017200.1:CDS:2;Parent=LTnewLM_040017200.1 ### LTnewLM_4 . polypeptide 419007 419721 . - . ID=LTnewLM_040017200.1:pep;Derives_from=LTnewLM_040017200.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 429721 430656 1 - . ID=LTnewLM_040017300 LTnewLM_4 AUGUSTUS mRNA 429721 430656 1 - . ID=LTnewLM_040017300.1;Parent=LTnewLM_040017300 LTnewLM_4 AUGUSTUS CDS 429721 430656 1 - 0 ID=LTnewLM_040017300.1:CDS:1;Parent=LTnewLM_040017300.1 ### LTnewLM_4 . polypeptide 429721 430656 . - . ID=LTnewLM_040017300.1:pep;Derives_from=LTnewLM_040017300.1;orthologous_to=LmjF.04.1170_mRNA;ortholog_cluster=OG0006861;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13893|Pfam:PF00076;Ontology_term=GO:0003676 LTnewLM_4 Pfam protein_match 429841 430098 . - . Parent=LTnewLM_040017300.1:pep;Name=PF13893;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) LTnewLM_4 Pfam protein_match 429925 430095 . - . Parent=LTnewLM_040017300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_4 Pfam protein_match 430165 430422 . - . Parent=LTnewLM_040017300.1:pep;Name=PF13893;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain) LTnewLM_4 Pfam protein_match 430255 430398 . - . Parent=LTnewLM_040017300.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_4 AUGUSTUS gene 433499 441283 1 - . ID=LTnewLM_040017400 LTnewLM_4 AUGUSTUS mRNA 433499 441283 1 - . ID=LTnewLM_040017400.1;Parent=LTnewLM_040017400 LTnewLM_4 AUGUSTUS CDS 433499 441283 1 - 0 ID=LTnewLM_040017400.1:CDS:1;Parent=LTnewLM_040017400.1 ### LTnewLM_4 . polypeptide 433499 441283 . - . ID=LTnewLM_040017400.1:pep;Derives_from=LTnewLM_040017400.1;orthologous_to=LmjF.04.1180_mRNA;ortholog_cluster=OG0006862;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 442544 444115 1 - . ID=LTnewLM_040017500 LTnewLM_4 AUGUSTUS mRNA 442544 444115 1 - . ID=LTnewLM_040017500.1;Parent=LTnewLM_040017500 LTnewLM_4 AUGUSTUS CDS 442544 444115 1 - 0 ID=LTnewLM_040017500.1:CDS:1;Parent=LTnewLM_040017500.1 ### LTnewLM_4 . polypeptide 442544 444115 . - . ID=LTnewLM_040017500.1:pep;Derives_from=LTnewLM_040017500.1;orthologous_to=LmjF.04.1190_mRNA;ortholog_cluster=OG0006863;product=term%3DPoly A polymerase head domain/Probable RNA and SrmB- binding site of polymerase A%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01743|Pfam:PF12627;Ontology_term=GO:0003723,GO:0016779,GO:0006396 LTnewLM_4 Pfam protein_match 443318 443428 . - . Parent=LTnewLM_040017500.1:pep;Name=PF12627;signature_desc=Probable RNA and SrmB- binding site of polymerase A LTnewLM_4 Pfam protein_match 443582 444010 . - . Parent=LTnewLM_040017500.1:pep;Name=PF01743;signature_desc=Poly A polymerase head domain;Ontology_term=GO:0003723,GO:0016779,GO:0006396 ### LTnewLM_4 AUGUSTUS gene 444952 445515 1 - . ID=LTnewLM_040017600 LTnewLM_4 AUGUSTUS mRNA 444952 445515 1 - . ID=LTnewLM_040017600.1;Parent=LTnewLM_040017600 LTnewLM_4 AUGUSTUS CDS 444952 445515 1 - 0 ID=LTnewLM_040017600.1:CDS:1;Parent=LTnewLM_040017600.1 ### LTnewLM_4 . polypeptide 444952 445515 . - . ID=LTnewLM_040017600.1:pep;Derives_from=LTnewLM_040017600.1;orthologous_to=LmjF.04.1200_mRNA;ortholog_cluster=OG0006864;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_4 Pfam protein_match 445189 445251 . - . Parent=LTnewLM_040017600.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_4 AUGUSTUS gene 446481 446741 1 - . ID=LTnewLM_040017700 LTnewLM_4 AUGUSTUS mRNA 446481 446741 1 - . ID=LTnewLM_040017700.1;Parent=LTnewLM_040017700 LTnewLM_4 AUGUSTUS CDS 446481 446741 1 - 0 ID=LTnewLM_040017700.1:CDS:1;Parent=LTnewLM_040017700.1 ### LTnewLM_4 . polypeptide 446481 446741 . - . ID=LTnewLM_040017700.1:pep;Derives_from=LTnewLM_040017700.1;product=term%3Dhypothetical protein ### LTnewLM_4 AUGUSTUS gene 450292 451398 1 - . ID=LTnewLM_040017800 LTnewLM_4 AUGUSTUS mRNA 450292 451398 1 - . ID=LTnewLM_040017800.1;Parent=LTnewLM_040017800 LTnewLM_4 AUGUSTUS CDS 450292 451398 1 - 0 ID=LTnewLM_040017800.1:CDS:1;Parent=LTnewLM_040017800.1 ### LTnewLM_4 . polypeptide 450292 451398 . - . ID=LTnewLM_040017800.1:pep;Derives_from=LTnewLM_040017800.1;orthologous_to=LmjF.04.1210_mRNA;ortholog_cluster=OG0006865;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF17667;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 450664 451332 . - . Parent=LTnewLM_040017800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_4 Pfam protein_match 450739 451128 . - . Parent=LTnewLM_040017800.1:pep;Name=PF17667;signature_desc=Fungal protein kinase LTnewLM_4 Pfam protein_match 450886 451335 . - . Parent=LTnewLM_040017800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_4 AUGUSTUS gene 452375 455560 1 - . ID=LTnewLM_040017900 LTnewLM_4 AUGUSTUS mRNA 452375 455560 1 - . ID=LTnewLM_040017900.1;Parent=LTnewLM_040017900 LTnewLM_4 AUGUSTUS CDS 452375 455560 1 - 0 ID=LTnewLM_040017900.1:CDS:1;Parent=LTnewLM_040017900.1 ### LTnewLM_4 . polypeptide 452375 455560 . - . ID=LTnewLM_040017900.1:pep;Derives_from=LTnewLM_040017900.1;orthologous_to=LmjF.04.1220_mRNA;ortholog_cluster=OG0006866;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_4 AUGUSTUS gene 456744 457874 1 - . ID=LTnewLM_040018000 LTnewLM_4 AUGUSTUS mRNA 456744 457874 1 - . ID=LTnewLM_040018000.1;Parent=LTnewLM_040018000 LTnewLM_4 AUGUSTUS CDS 456744 457874 1 - 0 ID=LTnewLM_040018000.1:CDS:1;Parent=LTnewLM_040018000.1 ### LTnewLM_4 . polypeptide 456744 457874 . - . ID=LTnewLM_040018000.1:pep;Derives_from=LTnewLM_040018000.1;orthologous_to=LmjF.04.1230_mRNA;ortholog_cluster=OG0006867;product=term%3DActin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00022 LTnewLM_4 Pfam protein_match 456750 457862 . - . Parent=LTnewLM_040018000.1:pep;Name=PF00022;signature_desc=Actin ### LTnewLM_5 AUGUSTUS gene 1 2014 0.76 + . ID=LTnewLM_050005000;fiveEndPartial=true;Start_range=.,. LTnewLM_5 AUGUSTUS mRNA 1 2014 0.76 + . ID=LTnewLM_050005000.1;Parent=LTnewLM_050005000 LTnewLM_5 AUGUSTUS CDS 1725 2014 0.76 + 2 ID=LTnewLM_050005000.1:CDS:1;Parent=LTnewLM_050005000.1 ### LTnewLM_5 . contig 1 483666 . + . Name=LTnewLM_CTG000039 LTnewLM_5 . polypeptide 1725 2014 . + . ID=LTnewLM_050005000.1:pep;Derives_from=LTnewLM_050005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_080005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 7204 9951 1 + . ID=LTnewLM_050005100 LTnewLM_5 AUGUSTUS mRNA 7204 9951 1 + . ID=LTnewLM_050005100.1;Parent=LTnewLM_050005100 LTnewLM_5 AUGUSTUS CDS 7204 9951 1 + 0 ID=LTnewLM_050005100.1:CDS:1;Parent=LTnewLM_050005100.1 ### LTnewLM_5 . polypeptide 7204 9951 . + . ID=LTnewLM_050005100.1:pep;Derives_from=LTnewLM_050005100.1;orthologous_to=LmjF.05.0010_mRNA;ortholog_cluster=OG0006868;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 10410 10829 1 + . ID=LTnewLM_050005200 LTnewLM_5 AUGUSTUS mRNA 10410 10829 1 + . ID=LTnewLM_050005200.1;Parent=LTnewLM_050005200 LTnewLM_5 AUGUSTUS CDS 10410 10829 1 + 0 ID=LTnewLM_050005200.1:CDS:1;Parent=LTnewLM_050005200.1 ### LTnewLM_5 . polypeptide 10410 10829 . + . ID=LTnewLM_050005200.1:pep;Derives_from=LTnewLM_050005200.1;orthologous_to=LmjF.05.0020_mRNA;ortholog_cluster=OG0006869;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 11357 11944 1 + . ID=LTnewLM_050005300 LTnewLM_5 AUGUSTUS mRNA 11357 11944 1 + . ID=LTnewLM_050005300.1;Parent=LTnewLM_050005300 LTnewLM_5 AUGUSTUS CDS 11357 11944 1 + 0 ID=LTnewLM_050005300.1:CDS:1;Parent=LTnewLM_050005300.1 ### LTnewLM_5 . polypeptide 11357 11944 . + . ID=LTnewLM_050005300.1:pep;Derives_from=LTnewLM_050005300.1;orthologous_to=LmjF.05.0030_mRNA;ortholog_cluster=OG0006870;product=term%3DADP-ribosylation factor family/Signal recognition particle receptor beta subunit/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF09439|Pfam:PF08477|Pfam:PF00071|Pfam:PF01926;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_5 Pfam protein_match 11384 11926 . + . Parent=LTnewLM_050005300.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_5 Pfam protein_match 11417 11749 . + . Parent=LTnewLM_050005300.1:pep;Name=PF09439;signature_desc=Signal recognition particle receptor beta subunit LTnewLM_5 Pfam protein_match 11420 11749 . + . Parent=LTnewLM_050005300.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_5 Pfam protein_match 11420 11755 . + . Parent=LTnewLM_050005300.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_5 Pfam protein_match 11423 11743 . + . Parent=LTnewLM_050005300.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_5 AUGUSTUS gene 13052 14797 1 + . ID=LTnewLM_050005400 LTnewLM_5 AUGUSTUS mRNA 13052 14797 1 + . ID=LTnewLM_050005400.1;Parent=LTnewLM_050005400 LTnewLM_5 AUGUSTUS CDS 13052 14797 1 + 0 ID=LTnewLM_050005400.1:CDS:1;Parent=LTnewLM_050005400.1 ### LTnewLM_5 . polypeptide 13052 14797 . + . ID=LTnewLM_050005400.1:pep;Derives_from=LTnewLM_050005400.1;orthologous_to=LmjF.05.0040_mRNA;ortholog_cluster=OG0006871;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 15980 18481 1 + . ID=LTnewLM_050005500 LTnewLM_5 AUGUSTUS mRNA 15980 18481 1 + . ID=LTnewLM_050005500.1;Parent=LTnewLM_050005500 LTnewLM_5 AUGUSTUS CDS 15980 18481 1 + 0 ID=LTnewLM_050005500.1:CDS:1;Parent=LTnewLM_050005500.1 ### LTnewLM_5 . polypeptide 15980 18481 . + . ID=LTnewLM_050005500.1:pep;Derives_from=LTnewLM_050005500.1;orthologous_to=LmjF.05.0050_mRNA;ortholog_cluster=OG0006872;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 19709 22210 1 + . ID=LTnewLM_050005600 LTnewLM_5 AUGUSTUS mRNA 19709 22210 1 + . ID=LTnewLM_050005600.1;Parent=LTnewLM_050005600 LTnewLM_5 AUGUSTUS CDS 19709 22210 1 + 0 ID=LTnewLM_050005600.1:CDS:1;Parent=LTnewLM_050005600.1 ### LTnewLM_5 . polypeptide 19709 22210 . + . ID=LTnewLM_050005600.1:pep;Derives_from=LTnewLM_050005600.1;orthologous_to=LmjF.05.0060_mRNA;ortholog_cluster=OG0006873;product=term%3DMajor Vault Protein repeat domain/Major Vault Protein Repeat domain/Shoulder domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17794|Pfam:PF01505|Pfam:PF17796|Pfam:PF17795|Pfam:PF11978 LTnewLM_5 Pfam protein_match 19853 20017 . + . Parent=LTnewLM_050005600.1:pep;Name=PF17794;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 20054 20170 . + . Parent=LTnewLM_050005600.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 20207 20323 . + . Parent=LTnewLM_050005600.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 20372 20464 . + . Parent=LTnewLM_050005600.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 20684 20797 . + . Parent=LTnewLM_050005600.1:pep;Name=PF01505;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 20837 20983 . + . Parent=LTnewLM_050005600.1:pep;Name=PF17796;signature_desc=Major Vault Protein repeat domain LTnewLM_5 Pfam protein_match 21053 21235 . + . Parent=LTnewLM_050005600.1:pep;Name=PF17795;signature_desc=Major Vault Protein Repeat domain LTnewLM_5 Pfam protein_match 21239 21583 . + . Parent=LTnewLM_050005600.1:pep;Name=PF11978;signature_desc=Shoulder domain ### LTnewLM_5 AUGUSTUS gene 24285 24560 1 + . ID=LTnewLM_050005700 LTnewLM_5 AUGUSTUS mRNA 24285 24560 1 + . ID=LTnewLM_050005700.1;Parent=LTnewLM_050005700 LTnewLM_5 AUGUSTUS CDS 24285 24560 1 + 0 ID=LTnewLM_050005700.1:CDS:1;Parent=LTnewLM_050005700.1 ### LTnewLM_5 . polypeptide 24285 24560 . + . ID=LTnewLM_050005700.1:pep;Derives_from=LTnewLM_050005700.1;orthologous_to=LmjF.05.0070_mRNA;ortholog_cluster=OG0006874;product=term%3DDynein light chain type 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01221;Ontology_term=GO:0005875,GO:0007017 LTnewLM_5 Pfam protein_match 24315 24548 . + . Parent=LTnewLM_050005700.1:pep;Name=PF01221;signature_desc=Dynein light chain type 1;Ontology_term=GO:0007017,GO:0005875 ### LTnewLM_5 AUGUSTUS gene 25496 26101 1 + . ID=LTnewLM_050005800 LTnewLM_5 AUGUSTUS mRNA 25496 26101 1 + . ID=LTnewLM_050005800.1;Parent=LTnewLM_050005800 LTnewLM_5 AUGUSTUS CDS 25496 26101 1 + 0 ID=LTnewLM_050005800.1:CDS:1;Parent=LTnewLM_050005800.1 ### LTnewLM_5 . polypeptide 25496 26101 . + . ID=LTnewLM_050005800.1:pep;Derives_from=LTnewLM_050005800.1;orthologous_to=LmjF.05.0080_mRNA;ortholog_cluster=OG0006875;product=term%3DRrp15p%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07890 LTnewLM_5 Pfam protein_match 25553 26080 . + . Parent=LTnewLM_050005800.1:pep;Name=PF07890;signature_desc=Rrp15p ### LTnewLM_5 AUGUSTUS gene 27424 27963 1 + . ID=LTnewLM_050005900 LTnewLM_5 AUGUSTUS mRNA 27424 27963 1 + . ID=LTnewLM_050005900.1;Parent=LTnewLM_050005900 LTnewLM_5 AUGUSTUS CDS 27424 27963 1 + 0 ID=LTnewLM_050005900.1:CDS:1;Parent=LTnewLM_050005900.1 ### LTnewLM_5 . polypeptide 27424 27963 . + . ID=LTnewLM_050005900.1:pep;Derives_from=LTnewLM_050005900.1;orthologous_to=LmjF.05.0090_mRNA;ortholog_cluster=OG0006876;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_5 Pfam protein_match 27424 27843 . + . Parent=LTnewLM_050005900.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_5 AUGUSTUS gene 29812 31725 1 + . ID=LTnewLM_050006000 LTnewLM_5 AUGUSTUS mRNA 29812 31725 1 + . ID=LTnewLM_050006000.1;Parent=LTnewLM_050006000 LTnewLM_5 AUGUSTUS CDS 29812 31725 1 + 0 ID=LTnewLM_050006000.1:CDS:1;Parent=LTnewLM_050006000.1 ### LTnewLM_5 . polypeptide 29812 31725 . + . ID=LTnewLM_050006000.1:pep;Derives_from=LTnewLM_050006000.1;orthologous_to=LmjF.05.0100_mRNA;ortholog_cluster=OG0006877;product=term%3DPlus-3 domain/Calcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03126|Pfam:PF00149;Ontology_term=GO:0006352,GO:0016570,GO:0005634,GO:0016787,GO:0003677 LTnewLM_5 Pfam protein_match 29923 30210 . + . Parent=LTnewLM_050006000.1:pep;Name=PF03126;signature_desc=Plus-3 domain;Ontology_term=GO:0003677,GO:0006352,GO:0016570,GO:0005634 LTnewLM_5 Pfam protein_match 30796 31479 . + . Parent=LTnewLM_050006000.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_5 AUGUSTUS gene 35242 35613 1 + . ID=LTnewLM_050006100 LTnewLM_5 AUGUSTUS mRNA 35242 35613 1 + . ID=LTnewLM_050006100.1;Parent=LTnewLM_050006100 LTnewLM_5 AUGUSTUS CDS 35242 35613 1 + 0 ID=LTnewLM_050006100.1:CDS:1;Parent=LTnewLM_050006100.1 ### LTnewLM_5 . polypeptide 35242 35613 . + . ID=LTnewLM_050006100.1:pep;Derives_from=LTnewLM_050006100.1;orthologous_to=LmjF.05.0110_mRNA;ortholog_cluster=OG0006878;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 36616 37632 1 + . ID=LTnewLM_050006200 LTnewLM_5 AUGUSTUS mRNA 36616 37632 1 + . ID=LTnewLM_050006200.1;Parent=LTnewLM_050006200 LTnewLM_5 AUGUSTUS CDS 36616 37632 1 + 0 ID=LTnewLM_050006200.1:CDS:1;Parent=LTnewLM_050006200.1 ### LTnewLM_5 . polypeptide 36616 37632 . + . ID=LTnewLM_050006200.1:pep;Derives_from=LTnewLM_050006200.1;orthologous_to=LmjF.05.0120_mRNA;ortholog_cluster=OG0006879;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 39272 40570 1 + . ID=LTnewLM_050006300 LTnewLM_5 AUGUSTUS mRNA 39272 40570 1 + . ID=LTnewLM_050006300.1;Parent=LTnewLM_050006300 LTnewLM_5 AUGUSTUS CDS 39272 40570 1 + 0 ID=LTnewLM_050006300.1:CDS:1;Parent=LTnewLM_050006300.1 ### LTnewLM_5 . polypeptide 39272 40570 . + . ID=LTnewLM_050006300.1:pep;Derives_from=LTnewLM_050006300.1;orthologous_to=LmjF.05.0130_mRNA;ortholog_cluster=OG0006880;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/ABC1 atypical kinase-like domain/Fungal protein kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF03109|Pfam:PF17667;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_5 Pfam protein_match 39338 40126 . + . Parent=LTnewLM_050006300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_5 Pfam protein_match 39341 40243 . + . Parent=LTnewLM_050006300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_5 Pfam protein_match 39566 39829 . + . Parent=LTnewLM_050006300.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain LTnewLM_5 Pfam protein_match 39635 39808 . + . Parent=LTnewLM_050006300.1:pep;Name=PF17667;signature_desc=Fungal protein kinase ### LTnewLM_5 AUGUSTUS gene 43403 45439 1 + . ID=LTnewLM_050006400 LTnewLM_5 AUGUSTUS mRNA 43403 45439 1 + . ID=LTnewLM_050006400.1;Parent=LTnewLM_050006400 LTnewLM_5 AUGUSTUS CDS 43403 45439 1 + 0 ID=LTnewLM_050006400.1:CDS:1;Parent=LTnewLM_050006400.1 ### LTnewLM_5 . polypeptide 43403 45439 . + . ID=LTnewLM_050006400.1:pep;Derives_from=LTnewLM_050006400.1;orthologous_to=LmjF.05.0140_mRNA;ortholog_cluster=OG0006881;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/GUCT (NUC152) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF08152;Ontology_term=GO:0003723,GO:0005524,GO:0005634,GO:0003676,GO:0004386 LTnewLM_5 Pfam protein_match 43733 44260 . + . Parent=LTnewLM_050006400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 44414 44701 . + . Parent=LTnewLM_050006400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_5 Pfam protein_match 44966 45241 . + . Parent=LTnewLM_050006400.1:pep;Name=PF08152;signature_desc=GUCT (NUC152) domain;Ontology_term=GO:0003723,GO:0004386,GO:0005524,GO:0005634 ### LTnewLM_5 AUGUSTUS gene 47069 48394 1 + . ID=LTnewLM_050006500 LTnewLM_5 AUGUSTUS mRNA 47069 48394 1 + . ID=LTnewLM_050006500.1;Parent=LTnewLM_050006500 LTnewLM_5 AUGUSTUS CDS 47069 48394 1 + 0 ID=LTnewLM_050006500.1:CDS:1;Parent=LTnewLM_050006500.1 ### LTnewLM_5 . polypeptide 47069 48394 . + . ID=LTnewLM_050006500.1:pep;Derives_from=LTnewLM_050006500.1;orthologous_to=LmjF.05.0150_mRNA;ortholog_cluster=OG0006882;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_5 Pfam protein_match 47246 47314 . + . Parent=LTnewLM_050006500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_5 Pfam protein_match 47333 47398 . + . Parent=LTnewLM_050006500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_5 Pfam protein_match 47537 47596 . + . Parent=LTnewLM_050006500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_5 Pfam protein_match 47888 47950 . + . Parent=LTnewLM_050006500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_5 Pfam protein_match 47978 48037 . + . Parent=LTnewLM_050006500.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_5 AUGUSTUS gene 49467 51008 1 + . ID=LTnewLM_050006600 LTnewLM_5 AUGUSTUS mRNA 49467 51008 1 + . ID=LTnewLM_050006600.1;Parent=LTnewLM_050006600 LTnewLM_5 AUGUSTUS CDS 49467 51008 1 + 0 ID=LTnewLM_050006600.1:CDS:1;Parent=LTnewLM_050006600.1 ### LTnewLM_5 . polypeptide 49467 51008 . + . ID=LTnewLM_050006600.1:pep;Derives_from=LTnewLM_050006600.1;orthologous_to=LmjF.05.0160_mRNA;ortholog_cluster=OG0006883;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 51523 53793 1 + . ID=LTnewLM_050006700 LTnewLM_5 AUGUSTUS mRNA 51523 53793 1 + . ID=LTnewLM_050006700.1;Parent=LTnewLM_050006700 LTnewLM_5 AUGUSTUS CDS 51523 53793 1 + 0 ID=LTnewLM_050006700.1:CDS:1;Parent=LTnewLM_050006700.1 ### LTnewLM_5 . polypeptide 51523 53793 . + . ID=LTnewLM_050006700.1:pep;Derives_from=LTnewLM_050006700.1;orthologous_to=LmjF.05.0170_mRNA;ortholog_cluster=OG0006884;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 55206 56639 1 + . ID=LTnewLM_050006800 LTnewLM_5 AUGUSTUS mRNA 55206 56639 1 + . ID=LTnewLM_050006800.1;Parent=LTnewLM_050006800 LTnewLM_5 AUGUSTUS CDS 55206 56639 1 + 0 ID=LTnewLM_050006800.1:CDS:1;Parent=LTnewLM_050006800.1 ### LTnewLM_5 . polypeptide 55206 56639 . + . ID=LTnewLM_050006800.1:pep;Derives_from=LTnewLM_050006800.1;orthologous_to=LmjF.05.0180_mRNA;ortholog_cluster=OG0006885;product=term%3DBiotin-requiring enzyme/e3 binding domain/2-oxoacid dehydrogenases acyltransferase (catalytic domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00364|Pfam:PF02817|Pfam:PF00198;Ontology_term=GO:0016746,GO:0008152 LTnewLM_5 Pfam protein_match 55356 55565 . + . Parent=LTnewLM_050006800.1:pep;Name=PF00364;signature_desc=Biotin-requiring enzyme LTnewLM_5 Pfam protein_match 55707 55811 . + . Parent=LTnewLM_050006800.1:pep;Name=PF02817;signature_desc=e3 binding domain;Ontology_term=GO:0016746,GO:0008152 LTnewLM_5 Pfam protein_match 55929 56621 . + . Parent=LTnewLM_050006800.1:pep;Name=PF00198;signature_desc=2-oxoacid dehydrogenases acyltransferase (catalytic domain);Ontology_term=GO:0016746,GO:0008152 ### LTnewLM_5 AUGUSTUS gene 58180 59253 1 + . ID=LTnewLM_050006900 LTnewLM_5 AUGUSTUS mRNA 58180 59253 1 + . ID=LTnewLM_050006900.1;Parent=LTnewLM_050006900 LTnewLM_5 AUGUSTUS CDS 58180 59253 1 + 0 ID=LTnewLM_050006900.1:CDS:1;Parent=LTnewLM_050006900.1 ### LTnewLM_5 . polypeptide 58180 59253 . + . ID=LTnewLM_050006900.1:pep;Derives_from=LTnewLM_050006900.1;orthologous_to=LmjF.05.0190_mRNA;ortholog_cluster=OG0006886;product=term%3DFip1 motif/Zinc finger C-x8-C-x5-C-x3-H type (and similar)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05182|Pfam:PF00642;Ontology_term=GO:0046872 LTnewLM_5 Pfam protein_match 58372 58488 . + . Parent=LTnewLM_050006900.1:pep;Name=PF05182;signature_desc=Fip1 motif LTnewLM_5 Pfam protein_match 58798 58869 . + . Parent=LTnewLM_050006900.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 ### LTnewLM_5 AUGUSTUS gene 60149 62509 1 + . ID=LTnewLM_050007000 LTnewLM_5 AUGUSTUS mRNA 60149 62509 1 + . ID=LTnewLM_050007000.1;Parent=LTnewLM_050007000 LTnewLM_5 AUGUSTUS CDS 60149 62509 1 + 0 ID=LTnewLM_050007000.1:CDS:1;Parent=LTnewLM_050007000.1 ### LTnewLM_5 . polypeptide 60149 62509 . + . ID=LTnewLM_050007000.1:pep;Derives_from=LTnewLM_050007000.1;orthologous_to=LmjF.05.0200_mRNA;ortholog_cluster=OG0006887;product=term%3D50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01926;Ontology_term=GO:0005525 LTnewLM_5 Pfam protein_match 61376 61543 . + . Parent=LTnewLM_050007000.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_5 AUGUSTUS gene 63715 68202 1 + . ID=LTnewLM_050007100 LTnewLM_5 AUGUSTUS mRNA 63715 68202 1 + . ID=LTnewLM_050007100.1;Parent=LTnewLM_050007100 LTnewLM_5 AUGUSTUS CDS 63715 68202 1 + 0 ID=LTnewLM_050007100.1:CDS:1;Parent=LTnewLM_050007100.1 ### LTnewLM_5 . polypeptide 63715 68202 . + . ID=LTnewLM_050007100.1:pep;Derives_from=LTnewLM_050007100.1;orthologous_to=LmjF.05.0210_mRNA;ortholog_cluster=OG0006888;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 69137 71800 1 + . ID=LTnewLM_050007200 LTnewLM_5 AUGUSTUS mRNA 69137 71800 1 + . ID=LTnewLM_050007200.1;Parent=LTnewLM_050007200 LTnewLM_5 AUGUSTUS CDS 69137 71800 1 + 0 ID=LTnewLM_050007200.1:CDS:1;Parent=LTnewLM_050007200.1 ### LTnewLM_5 . polypeptide 69137 71800 . + . ID=LTnewLM_050007200.1:pep;Derives_from=LTnewLM_050007200.1;orthologous_to=LmjF.05.0220_mRNA;ortholog_cluster=OG0006889;product=term%3DDual specificity phosphatase%2C catalytic domain/Protein-tyrosine phosphatase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782|Pfam:PF00102;Ontology_term=GO:0008138,GO:0006470,GO:0004725 LTnewLM_5 Pfam protein_match 70049 70444 . + . Parent=LTnewLM_050007200.1:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 LTnewLM_5 Pfam protein_match 70202 70360 . + . Parent=LTnewLM_050007200.1:pep;Name=PF00102;signature_desc=Protein-tyrosine phosphatase;Ontology_term=GO:0004725,GO:0006470 ### LTnewLM_5 AUGUSTUS gene 76104 78053 1 + . ID=LTnewLM_050007300 LTnewLM_5 AUGUSTUS mRNA 76104 78053 1 + . ID=LTnewLM_050007300.1;Parent=LTnewLM_050007300 LTnewLM_5 AUGUSTUS CDS 76104 78053 1 + 0 ID=LTnewLM_050007300.1:CDS:1;Parent=LTnewLM_050007300.1 ### LTnewLM_5 . polypeptide 76104 78053 . + . ID=LTnewLM_050007300.1:pep;Derives_from=LTnewLM_050007300.1;orthologous_to=LmjF.05.0230_mRNA;ortholog_cluster=OG0006890;product=term%3DIron only hydrogenase large subunit%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02906 LTnewLM_5 Pfam protein_match 76647 77669 . + . Parent=LTnewLM_050007300.1:pep;Name=PF02906;signature_desc=Iron only hydrogenase large subunit%2C C-terminal domain ### LTnewLM_5 Liftoff gene 79440 82949 . + . ID=LTnewLM_050007400;coverage=0.810;sequence_ID=0.681;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0240_0 LTnewLM_5 Liftoff mRNA 79440 82949 . + . ID=LTnewLM_050007400.1;Parent=LTnewLM_050007400;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_5 Liftoff CDS 79440 82949 . + 0 ID=LTnewLM_050007400.1:CDS:1;Parent=LTnewLM_050007400.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 79440 82949 . + . ID=LTnewLM_050007400.1:pep;Derives_from=LTnewLM_050007400.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 82571 83544 0.67 + . ID=LTnewLM_050007500 LTnewLM_5 AUGUSTUS mRNA 82571 83544 0.36 + . ID=LTnewLM_050007500.1;Parent=LTnewLM_050007500 LTnewLM_5 AUGUSTUS CDS 82571 83432 0.82 + 0 ID=LTnewLM_050007500.1:CDS:1;Parent=LTnewLM_050007500.1 LTnewLM_5 AUGUSTUS CDS 83513 83544 0.42 + 2 ID=LTnewLM_050007500.1:CDS:2;Parent=LTnewLM_050007500.1 LTnewLM_5 AUGUSTUS mRNA 82670 83544 0.31 + . ID=LTnewLM_050007500.2;Parent=LTnewLM_050007500 LTnewLM_5 AUGUSTUS CDS 82670 83432 0.74 + 0 ID=LTnewLM_050007500.2:CDS:1;Parent=LTnewLM_050007500.2 LTnewLM_5 AUGUSTUS CDS 83513 83544 0.39 + 2 ID=LTnewLM_050007500.2:CDS:2;Parent=LTnewLM_050007500.2 ### LTnewLM_5 . polypeptide 82571 83544 . + . ID=LTnewLM_050007500.1:pep;Derives_from=LTnewLM_050007500.1;orthologous_to=LTnewLM_050007500.2;ortholog_cluster=OG0006891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 . polypeptide 82670 83544 . + . ID=LTnewLM_050007500.2:pep;Derives_from=LTnewLM_050007500.2;orthologous_to=LTnewLM_050007500.1;ortholog_cluster=OG0006891;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 86694 87883 0.4 + . ID=LTnewLM_050007600 LTnewLM_5 AUGUSTUS mRNA 86694 87883 0.4 + . ID=LTnewLM_050007600.1;Parent=LTnewLM_050007600 LTnewLM_5 AUGUSTUS CDS 86694 86837 0.51 + 0 ID=LTnewLM_050007600.1:CDS:1;Parent=LTnewLM_050007600.1 LTnewLM_5 AUGUSTUS CDS 86924 87883 0.41 + 0 ID=LTnewLM_050007600.1:CDS:2;Parent=LTnewLM_050007600.1 ### LTnewLM_5 . polypeptide 86694 87883 . + . ID=LTnewLM_050007600.1:pep;Derives_from=LTnewLM_050007600.1;orthologous_to=LmjF.05.0240_mRNA;ortholog_cluster=OG0006892;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 89662 89955 1 + . ID=LTnewLM_050007700 LTnewLM_5 AUGUSTUS mRNA 89662 89955 1 + . ID=LTnewLM_050007700.1;Parent=LTnewLM_050007700 LTnewLM_5 AUGUSTUS CDS 89662 89955 1 + 0 ID=LTnewLM_050007700.1:CDS:1;Parent=LTnewLM_050007700.1 ### LTnewLM_5 . polypeptide 89662 89955 . + . ID=LTnewLM_050007700.1:pep;Derives_from=LTnewLM_050007700.1;orthologous_to=LmjF.05.0250_mRNA;ortholog_cluster=OG0006893;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 90644 91804 1 + . ID=LTnewLM_050007800 LTnewLM_5 AUGUSTUS mRNA 90644 91804 1 + . ID=LTnewLM_050007800.1;Parent=LTnewLM_050007800 LTnewLM_5 AUGUSTUS CDS 90644 91804 1 + 0 ID=LTnewLM_050007800.1:CDS:1;Parent=LTnewLM_050007800.1 ### LTnewLM_5 . polypeptide 90644 91804 . + . ID=LTnewLM_050007800.1:pep;Derives_from=LTnewLM_050007800.1;orthologous_to=LmjF.05.0260_mRNA;ortholog_cluster=OG0006894;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 92812 93774 1 + . ID=LTnewLM_050007900 LTnewLM_5 AUGUSTUS mRNA 92812 93774 1 + . ID=LTnewLM_050007900.1;Parent=LTnewLM_050007900 LTnewLM_5 AUGUSTUS CDS 92812 93774 1 + 0 ID=LTnewLM_050007900.1:CDS:1;Parent=LTnewLM_050007900.1 ### LTnewLM_5 . polypeptide 92812 93774 . + . ID=LTnewLM_050007900.1:pep;Derives_from=LTnewLM_050007900.1;orthologous_to=LmjF.05.0270_mRNA;ortholog_cluster=OG0006895;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 94397 95071 1 + . ID=LTnewLM_050008000 LTnewLM_5 AUGUSTUS mRNA 94397 95071 1 + . ID=LTnewLM_050008000.1;Parent=LTnewLM_050008000 LTnewLM_5 AUGUSTUS CDS 94397 95071 1 + 0 ID=LTnewLM_050008000.1:CDS:1;Parent=LTnewLM_050008000.1 ### LTnewLM_5 . polypeptide 94397 95071 . + . ID=LTnewLM_050008000.1:pep;Derives_from=LTnewLM_050008000.1;orthologous_to=LmjF.05.0280_mRNA;ortholog_cluster=OG0006896;product=term%3DProtein tyrosine phosphatase-like protein%2C PTPLA%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04387 LTnewLM_5 Pfam protein_match 94547 95032 . + . Parent=LTnewLM_050008000.1:pep;Name=PF04387;signature_desc=Protein tyrosine phosphatase-like protein%2C PTPLA ### LTnewLM_5 AUGUSTUS gene 96891 97412 1 + . ID=LTnewLM_050008100 LTnewLM_5 AUGUSTUS mRNA 96891 97412 1 + . ID=LTnewLM_050008100.1;Parent=LTnewLM_050008100 LTnewLM_5 AUGUSTUS CDS 96891 97412 1 + 0 ID=LTnewLM_050008100.1:CDS:1;Parent=LTnewLM_050008100.1 ### LTnewLM_5 . polypeptide 96891 97412 . + . ID=LTnewLM_050008100.1:pep;Derives_from=LTnewLM_050008100.1;orthologous_to=LmjF.05.0285_mRNA;ortholog_cluster=OG0006897;product=term%3DARP2/3 complex 16 kDa subunit (p16-Arc)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04699;Ontology_term=GO:0030833,GO:0005885,GO:0034314,GO:0015629 LTnewLM_5 Pfam protein_match 97170 97403 . + . Parent=LTnewLM_050008100.1:pep;Name=PF04699;signature_desc=ARP2/3 complex 16 kDa subunit (p16-Arc);Ontology_term=GO:0030833,GO:0034314,GO:0005885,GO:0015629 ### LTnewLM_5 Liftoff gene 98862 100373 . + . ID=LTnewLM_050008200;coverage=1.0;sequence_ID=0.951;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.05.0290_0 LTnewLM_5 Liftoff mRNA 98862 100373 . + . ID=LTnewLM_050008200.1;Parent=LTnewLM_050008200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_5 Liftoff CDS 98862 100373 . + 0 ID=LTnewLM_050008200.1:CDS:1;Parent=LTnewLM_050008200.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 98862 100373 . + . ID=LTnewLM_050008200.1:pep;Derives_from=LTnewLM_050008200.1;orthologous_to=LmjF.05.0290_mRNA;ortholog_cluster=OG0006898;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_5 Pfam protein_match 99306 99572 . + . Parent=LTnewLM_050008200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_5 Pfam protein_match 99690 99929 . + . Parent=LTnewLM_050008200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_5 Pfam protein_match 100002 100331 . + . Parent=LTnewLM_050008200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_5 AUGUSTUS gene 101211 103256 0.84 + . ID=LTnewLM_050008300 LTnewLM_5 AUGUSTUS mRNA 101211 103256 0.84 + . ID=LTnewLM_050008300.1;Parent=LTnewLM_050008300 LTnewLM_5 AUGUSTUS CDS 101211 103256 0.84 + 0 ID=LTnewLM_050008300.1:CDS:1;Parent=LTnewLM_050008300.1 ### LTnewLM_5 . polypeptide 101211 103256 . + . ID=LTnewLM_050008300.1:pep;Derives_from=LTnewLM_050008300.1;orthologous_to=LmjF.05.0300_mRNA;ortholog_cluster=OG0006899;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 103935 104477 1 + . ID=LTnewLM_050008400 LTnewLM_5 AUGUSTUS mRNA 103935 104477 1 + . ID=LTnewLM_050008400.1;Parent=LTnewLM_050008400 LTnewLM_5 AUGUSTUS CDS 103935 104477 1 + 0 ID=LTnewLM_050008400.1:CDS:1;Parent=LTnewLM_050008400.1 ### LTnewLM_5 . polypeptide 103935 104477 . + . ID=LTnewLM_050008400.1:pep;Derives_from=LTnewLM_050008400.1;orthologous_to=LmjF.05.0310_mRNA;ortholog_cluster=OG0006900;product=term%3DGlutaredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00462;Ontology_term=GO:0009055,GO:0045454,GO:0015035 LTnewLM_5 Pfam protein_match 104211 104393 . + . Parent=LTnewLM_050008400.1:pep;Name=PF00462;signature_desc=Glutaredoxin;Ontology_term=GO:0009055,GO:0015035,GO:0045454 ### LTnewLM_5 . pseudogene 105223 108819 . + . ID=LTnewLM_050008500:pseudogene;coverage=0.992;sequence_ID=0.926;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.05.0330_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 105223 108819 . + . ID=LTnewLM_050008500.1;Parent=LTnewLM_050008500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 105667 108819 . + . ID=LTnewLM_050008500.1:pseudogenic_exon:1;Parent=LTnewLM_050008500.1;extra_copy_number=0 LTnewLM_5 . pseudogenic_transcript 105734 108819 . + . ID=LTnewLM_050008500.2;Parent=LTnewLM_050008500:pseudogene;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 105835 108819 . + . ID=LTnewLM_050008500.2:pseudogenic_exon:1;Parent=LTnewLM_050008500.2;extra_copy_number=0 ### LTnewLM_5 . polypeptide 105667 108819 . + . ID=LTnewLM_050008500.1:pep;Derives_from=LTnewLM_050008500.1;orthologous_to=LTnewLM_050008500.2,LmjF.05.0330.1_mRNA,LmjF.05.0330.2_mRNA;ortholog_cluster=OG0000296;product=term%3DMCM OB domain/MCM P-loop domain/AAA domain (dynein-related subfamily)/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17207|Pfam:PF00493|Pfam:PF07728|Pfam:PF17855;Ontology_term=GO:0016887,GO:0006260,GO:0005524,GO:0003677 LTnewLM_5 Pfam protein_match 106510 106791 . + . Parent=LTnewLM_050008500.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_5 Pfam protein_match 107434 108090 . + . Parent=LTnewLM_050008500.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_5 Pfam protein_match 107593 107958 . + . Parent=LTnewLM_050008500.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_5 Pfam protein_match 108415 108537 . + . Parent=LTnewLM_050008500.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_5 . polypeptide 105835 108819 . + . ID=LTnewLM_050008500.2:pep;Derives_from=LTnewLM_050008500.2;orthologous_to=LTnewLM_050008500.1,LmjF.05.0330.1_mRNA,LmjF.05.0330.2_mRNA;ortholog_cluster=OG0000296;product=term%3DMCM OB domain/MCM P-loop domain/AAA domain (dynein-related subfamily)/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17207|Pfam:PF00493|Pfam:PF07728|Pfam:PF17855;Ontology_term=GO:0016887,GO:0006260,GO:0005524,GO:0003677 LTnewLM_5 Pfam protein_match 106510 106791 . + . Parent=LTnewLM_050008500.2:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_5 Pfam protein_match 107434 108090 . + . Parent=LTnewLM_050008500.2:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_5 Pfam protein_match 107593 107958 . + . Parent=LTnewLM_050008500.2:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_5 Pfam protein_match 108415 108537 . + . Parent=LTnewLM_050008500.2:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_5 AUGUSTUS gene 109622 110737 1 + . ID=LTnewLM_050008600 LTnewLM_5 AUGUSTUS mRNA 109622 110737 1 + . ID=LTnewLM_050008600.1;Parent=LTnewLM_050008600 LTnewLM_5 AUGUSTUS CDS 109622 110737 1 + 0 ID=LTnewLM_050008600.1:CDS:1;Parent=LTnewLM_050008600.1 ### LTnewLM_5 . polypeptide 109622 110737 . + . ID=LTnewLM_050008600.1:pep;Derives_from=LTnewLM_050008600.1;orthologous_to=LmjF.05.0340_mRNA;ortholog_cluster=OG0006901;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 112135 113610 1 + . ID=LTnewLM_050008700 LTnewLM_5 AUGUSTUS mRNA 112135 113610 1 + . ID=LTnewLM_050008700.1;Parent=LTnewLM_050008700 LTnewLM_5 AUGUSTUS CDS 112135 113610 1 + 0 ID=LTnewLM_050008700.1:CDS:1;Parent=LTnewLM_050008700.1 ### LTnewLM_5 . polypeptide 112135 113610 . + . ID=LTnewLM_050008700.1:pep;Derives_from=LTnewLM_050008700.1;orthologous_to=LmjF.05.0350_mRNA;ortholog_cluster=OG0006902;product=term%3DPyridine nucleotide-disulphide oxidoreductase/Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF13738|Pfam:PF00070|Pfam:PF02852;Ontology_term=GO:0055114,GO:0016491,GO:0050660,GO:0045454 LTnewLM_5 Pfam protein_match 112147 113157 . + . Parent=LTnewLM_050008700.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_5 Pfam protein_match 112579 113109 . + . Parent=LTnewLM_050008700.1:pep;Name=PF13738;signature_desc=Pyridine nucleotide-disulphide oxidoreductase LTnewLM_5 Pfam protein_match 112702 112947 . + . Parent=LTnewLM_050008700.1:pep;Name=PF00070;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0050660,GO:0055114 LTnewLM_5 Pfam protein_match 113221 113535 . + . Parent=LTnewLM_050008700.1:pep;Name=PF02852;signature_desc=Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain;Ontology_term=GO:0045454,GO:0055114 ### LTnewLM_5 AUGUSTUS gene 114552 116429 1 + . ID=LTnewLM_050008800 LTnewLM_5 AUGUSTUS mRNA 114552 116429 1 + . ID=LTnewLM_050008800.1;Parent=LTnewLM_050008800 LTnewLM_5 AUGUSTUS CDS 114552 116429 1 + 0 ID=LTnewLM_050008800.1:CDS:1;Parent=LTnewLM_050008800.1 ### LTnewLM_5 . polypeptide 114552 116429 . + . ID=LTnewLM_050008800.1:pep;Derives_from=LTnewLM_050008800.1;orthologous_to=LmjF.05.0360_mRNA;ortholog_cluster=OG0006903;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 114627 115130 . + . Parent=LTnewLM_050008800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 115512 115838 . + . Parent=LTnewLM_050008800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_5 AUGUSTUS gene 117308 118294 1 + . ID=LTnewLM_050008900 LTnewLM_5 AUGUSTUS mRNA 117308 118294 1 + . ID=LTnewLM_050008900.1;Parent=LTnewLM_050008900 LTnewLM_5 AUGUSTUS CDS 117308 118294 1 + 0 ID=LTnewLM_050008900.1:CDS:1;Parent=LTnewLM_050008900.1 ### LTnewLM_5 . polypeptide 117308 118294 . + . ID=LTnewLM_050008900.1:pep;Derives_from=LTnewLM_050008900.1;orthologous_to=LmjF.05.0370_mRNA;ortholog_cluster=OG0006904;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 . pseudogene 120500 126452 . + . ID=LTnewLM_050009000:pseudogene;coverage=0.964;sequence_ID=0.807;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0380_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 120500 126452 . + . ID=LTnewLM_050009000.1;Parent=LTnewLM_050009000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 120500 126452 . + . ID=LTnewLM_050009000.1:pseudogenic_exon:1;Parent=LTnewLM_050009000.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 120500 126452 . + . ID=LTnewLM_050009000.1:pep;Derives_from=LTnewLM_050009000.1;orthologous_to=LmjF.05.0380_mRNA;ortholog_cluster=OG0007709;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 134588 136957 1 + . ID=LTnewLM_050009100 LTnewLM_5 AUGUSTUS mRNA 134588 136957 1 + . ID=LTnewLM_050009100.1;Parent=LTnewLM_050009100 LTnewLM_5 AUGUSTUS CDS 134588 136957 1 + 0 ID=LTnewLM_050009100.1:CDS:1;Parent=LTnewLM_050009100.1 ### LTnewLM_5 . polypeptide 134588 136957 . + . ID=LTnewLM_050009100.1:pep;Derives_from=LTnewLM_050009100.1;orthologous_to=LmjF.05.0390_mRNA;ortholog_cluster=OG0006905;product=term%3DMORN repeat/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_5 Pfam protein_match 135137 135205 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135209 135271 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135278 135337 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135344 135409 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135413 135457 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135485 135550 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135554 135619 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 135623 135685 . + . Parent=LTnewLM_050009100.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 136124 136900 . + . Parent=LTnewLM_050009100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_5 Pfam protein_match 136127 136885 . + . Parent=LTnewLM_050009100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_5 AUGUSTUS gene 138990 142619 1 + . ID=LTnewLM_050009200 LTnewLM_5 AUGUSTUS mRNA 138990 142619 1 + . ID=LTnewLM_050009200.1;Parent=LTnewLM_050009200 LTnewLM_5 AUGUSTUS CDS 138990 142619 1 + 0 ID=LTnewLM_050009200.1:CDS:1;Parent=LTnewLM_050009200.1 ### LTnewLM_5 . polypeptide 138990 142619 . + . ID=LTnewLM_050009200.1:pep;Derives_from=LTnewLM_050009200.1;orthologous_to=LmjF.05.0400_mRNA;ortholog_cluster=OG0006906;product=term%3DRecF/RecN/SMC N terminal domain/AAA domain/SMC proteins Flexible Hinge Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02463|Pfam:PF13476|Pfam:PF06470;Ontology_term=GO:0051276,GO:0005515,GO:0005694,GO:0005524 LTnewLM_5 Pfam protein_match 138996 142493 . + . Parent=LTnewLM_050009200.1:pep;Name=PF02463;signature_desc=RecF/RecN/SMC N terminal domain LTnewLM_5 Pfam protein_match 139002 140000 . + . Parent=LTnewLM_050009200.1:pep;Name=PF13476;signature_desc=AAA domain LTnewLM_5 Pfam protein_match 140544 140936 . + . Parent=LTnewLM_050009200.1:pep;Name=PF06470;signature_desc=SMC proteins Flexible Hinge Domain;Ontology_term=GO:0005515,GO:0005524,GO:0051276,GO:0005694 ### LTnewLM_5 AUGUSTUS gene 143608 146349 1 + . ID=LTnewLM_050009300 LTnewLM_5 AUGUSTUS mRNA 143608 146349 1 + . ID=LTnewLM_050009300.1;Parent=LTnewLM_050009300 LTnewLM_5 AUGUSTUS CDS 143608 146349 1 + 0 ID=LTnewLM_050009300.1:CDS:1;Parent=LTnewLM_050009300.1 ### LTnewLM_5 . polypeptide 143608 146349 . + . ID=LTnewLM_050009300.1:pep;Derives_from=LTnewLM_050009300.1;orthologous_to=LmjF.05.0410_mRNA;ortholog_cluster=OG0006907;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13432 LTnewLM_5 Pfam protein_match 145795 145971 . + . Parent=LTnewLM_050009300.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat ### LTnewLM_5 AUGUSTUS gene 147383 147718 1 + . ID=LTnewLM_050009400 LTnewLM_5 AUGUSTUS mRNA 147383 147718 1 + . ID=LTnewLM_050009400.1;Parent=LTnewLM_050009400 LTnewLM_5 AUGUSTUS CDS 147383 147718 1 + 0 ID=LTnewLM_050009400.1:CDS:1;Parent=LTnewLM_050009400.1 ### LTnewLM_5 . polypeptide 147383 147718 . + . ID=LTnewLM_050009400.1:pep;Derives_from=LTnewLM_050009400.1;orthologous_to=LmjF.05.0420_mRNA;ortholog_cluster=OG0006908;product=term%3DTctex-1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03645 LTnewLM_5 Pfam protein_match 147425 147700 . + . Parent=LTnewLM_050009400.1:pep;Name=PF03645;signature_desc=Tctex-1 family ### LTnewLM_5 AUGUSTUS gene 148742 149203 0.71 + . ID=LTnewLM_050009500 LTnewLM_5 AUGUSTUS mRNA 148742 149203 0.71 + . ID=LTnewLM_050009500.1;Parent=LTnewLM_050009500 LTnewLM_5 AUGUSTUS CDS 148742 149203 0.71 + 0 ID=LTnewLM_050009500.1:CDS:1;Parent=LTnewLM_050009500.1 ### LTnewLM_5 . polypeptide 148742 149203 . + . ID=LTnewLM_050009500.1:pep;Derives_from=LTnewLM_050009500.1;orthologous_to=LTnewLM_010007200.1,LTnewLM_170021200.1;ortholog_cluster=OG0000305;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 150417 152435 1 + . ID=LTnewLM_050009600 LTnewLM_5 AUGUSTUS mRNA 150417 152435 1 + . ID=LTnewLM_050009600.1;Parent=LTnewLM_050009600 LTnewLM_5 AUGUSTUS CDS 150417 152435 1 + 0 ID=LTnewLM_050009600.1:CDS:1;Parent=LTnewLM_050009600.1 ### LTnewLM_5 . polypeptide 150417 152435 . + . ID=LTnewLM_050009600.1:pep;Derives_from=LTnewLM_050009600.1;orthologous_to=LmjF.05.0430_mRNA;ortholog_cluster=OG0006909;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 152982 155537 1 + . ID=LTnewLM_050009700 LTnewLM_5 AUGUSTUS mRNA 152982 155537 1 + . ID=LTnewLM_050009700.1;Parent=LTnewLM_050009700 LTnewLM_5 AUGUSTUS CDS 152982 155537 1 + 0 ID=LTnewLM_050009700.1:CDS:1;Parent=LTnewLM_050009700.1 ### LTnewLM_5 . polypeptide 152982 155537 . + . ID=LTnewLM_050009700.1:pep;Derives_from=LTnewLM_050009700.1;orthologous_to=LmjF.05.0440_mRNA;ortholog_cluster=OG0006910;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 156829 157419 1 + . ID=LTnewLM_050009800 LTnewLM_5 AUGUSTUS mRNA 156829 157419 1 + . ID=LTnewLM_050009800.1;Parent=LTnewLM_050009800 LTnewLM_5 AUGUSTUS CDS 156829 157419 1 + 0 ID=LTnewLM_050009800.1:CDS:1;Parent=LTnewLM_050009800.1 ### LTnewLM_5 . polypeptide 156829 157419 . + . ID=LTnewLM_050009800.1:pep;Derives_from=LTnewLM_050009800.1;orthologous_to=LmjF.05.0450_mRNA;ortholog_cluster=OG0006911;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 158285 160168 1 + . ID=LTnewLM_050009900 LTnewLM_5 AUGUSTUS mRNA 158285 160168 1 + . ID=LTnewLM_050009900.1;Parent=LTnewLM_050009900 LTnewLM_5 AUGUSTUS CDS 158285 160168 1 + 0 ID=LTnewLM_050009900.1:CDS:1;Parent=LTnewLM_050009900.1 ### LTnewLM_5 . polypeptide 158285 160168 . + . ID=LTnewLM_050009900.1:pep;Derives_from=LTnewLM_050009900.1;orthologous_to=LmjF.05.0460_mRNA;ortholog_cluster=OG0006912;product=term%3DNGP1NT (NUC091) domain/50S ribosome-binding GTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08153|Pfam:PF01926;Ontology_term=GO:0005525 LTnewLM_5 Pfam protein_match 158402 158785 . + . Parent=LTnewLM_050009900.1:pep;Name=PF08153;signature_desc=NGP1NT (NUC091) domain LTnewLM_5 Pfam protein_match 159245 159445 . + . Parent=LTnewLM_050009900.1:pep;Name=PF01926;signature_desc=50S ribosome-binding GTPase;Ontology_term=GO:0005525 ### LTnewLM_5 AUGUSTUS gene 161664 162392 1 + . ID=LTnewLM_050010000 LTnewLM_5 AUGUSTUS mRNA 161664 162392 1 + . ID=LTnewLM_050010000.1;Parent=LTnewLM_050010000 LTnewLM_5 AUGUSTUS CDS 161664 162392 1 + 0 ID=LTnewLM_050010000.1:CDS:1;Parent=LTnewLM_050010000.1 ### LTnewLM_5 . polypeptide 161664 162392 . + . ID=LTnewLM_050010000.1:pep;Derives_from=LTnewLM_050010000.1;orthologous_to=LmjF.05.0470_mRNA;ortholog_cluster=OG0006913;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 163394 165109 1 + . ID=LTnewLM_050010100 LTnewLM_5 AUGUSTUS mRNA 163394 165109 1 + . ID=LTnewLM_050010100.1;Parent=LTnewLM_050010100 LTnewLM_5 AUGUSTUS CDS 163394 165109 1 + 0 ID=LTnewLM_050010100.1:CDS:1;Parent=LTnewLM_050010100.1 ### LTnewLM_5 . polypeptide 163394 165109 . + . ID=LTnewLM_050010100.1:pep;Derives_from=LTnewLM_050010100.1;orthologous_to=LmjF.05.0480_mRNA;ortholog_cluster=OG0006914;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_5 Pfam protein_match 163511 164071 . + . Parent=LTnewLM_050010100.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_5 . pseudogene 169265 170054 . + . ID=LTnewLM_050010200:pseudogene;coverage=0.956;sequence_ID=0.850;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0490_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 169265 170054 . + . ID=LTnewLM_050010200.1;Parent=LTnewLM_050010200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 169265 170054 . + . ID=LTnewLM_050010200.1:pseudogenic_exon:1;Parent=LTnewLM_050010200.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 169265 170054 . + . ID=LTnewLM_050010200.1:pep;Derives_from=LTnewLM_050010200.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 171896 173620 1 + . ID=LTnewLM_050010300 LTnewLM_5 AUGUSTUS mRNA 171896 173620 1 + . ID=LTnewLM_050010300.1;Parent=LTnewLM_050010300 LTnewLM_5 AUGUSTUS CDS 171896 173620 1 + 0 ID=LTnewLM_050010300.1:CDS:1;Parent=LTnewLM_050010300.1 ### LTnewLM_5 . polypeptide 171896 173620 . + . ID=LTnewLM_050010300.1:pep;Derives_from=LTnewLM_050010300.1;orthologous_to=LTnewLM_000008400.1,LTnewLM_050010400.1,LTnewLM_050010500.1,LmjF.05.0500_mRNA,LmjF.05.0510_mRNA;ortholog_cluster=OG0000050;product=term%3DATP synthase alpha/beta family%2C nucleotide-binding domain/ATP synthase alpha/beta chain%2C C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00006|Pfam:PF00306;Ontology_term=GO:0033178,GO:0015991,GO:0016820,GO:0005524 LTnewLM_5 Pfam protein_match 172421 173089 . + . Parent=LTnewLM_050010300.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 LTnewLM_5 Pfam protein_match 173111 173365 . + . Parent=LTnewLM_050010300.1:pep;Name=PF00306;signature_desc=ATP synthase alpha/beta chain%2C C terminal domain;Ontology_term=GO:0016820,GO:0015991,GO:0033178 ### LTnewLM_5 AUGUSTUS gene 175032 176756 1 + . ID=LTnewLM_050010400 LTnewLM_5 AUGUSTUS mRNA 175032 176756 1 + . ID=LTnewLM_050010400.1;Parent=LTnewLM_050010400 LTnewLM_5 AUGUSTUS CDS 175032 176756 1 + 0 ID=LTnewLM_050010400.1:CDS:1;Parent=LTnewLM_050010400.1 ### LTnewLM_5 . polypeptide 175032 176756 . + . ID=LTnewLM_050010400.1:pep;Derives_from=LTnewLM_050010400.1;orthologous_to=LTnewLM_000008400.1,LTnewLM_050010300.1,LTnewLM_050010500.1,LmjF.05.0500_mRNA,LmjF.05.0510_mRNA;ortholog_cluster=OG0000050;product=term%3DATP synthase alpha/beta family%2C nucleotide-binding domain/ATP synthase alpha/beta chain%2C C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00006|Pfam:PF00306;Ontology_term=GO:0033178,GO:0015991,GO:0016820,GO:0005524 LTnewLM_5 Pfam protein_match 175557 176225 . + . Parent=LTnewLM_050010400.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 LTnewLM_5 Pfam protein_match 176247 176501 . + . Parent=LTnewLM_050010400.1:pep;Name=PF00306;signature_desc=ATP synthase alpha/beta chain%2C C terminal domain;Ontology_term=GO:0016820,GO:0015991,GO:0033178 ### LTnewLM_5 AUGUSTUS gene 178142 179952 0.87 + . ID=LTnewLM_050010500 LTnewLM_5 AUGUSTUS mRNA 178142 179952 0.87 + . ID=LTnewLM_050010500.1;Parent=LTnewLM_050010500 LTnewLM_5 AUGUSTUS CDS 178142 178328 0.87 + 0 ID=LTnewLM_050010500.1:CDS:1;Parent=LTnewLM_050010500.1 LTnewLM_5 AUGUSTUS CDS 178415 179952 0.87 + 2 ID=LTnewLM_050010500.1:CDS:2;Parent=LTnewLM_050010500.1 ### LTnewLM_5 . polypeptide 178142 179952 . + . ID=LTnewLM_050010500.1:pep;Derives_from=LTnewLM_050010500.1;orthologous_to=LTnewLM_000008400.1,LTnewLM_050010300.1,LTnewLM_050010400.1,LmjF.05.0500_mRNA,LmjF.05.0510_mRNA;ortholog_cluster=OG0000050;product=term%3DATP synthase alpha/beta family%2C nucleotide-binding domain/ATP synthase alpha/beta chain%2C C terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00006|Pfam:PF00306;Ontology_term=GO:0033178,GO:0015991,GO:0016820,GO:0005524 LTnewLM_5 Pfam protein_match 178580 179248 . + . Parent=LTnewLM_050010500.1:pep;Name=PF00006;signature_desc=ATP synthase alpha/beta family%2C nucleotide-binding domain;Ontology_term=GO:0005524 LTnewLM_5 Pfam protein_match 179270 179524 . + . Parent=LTnewLM_050010500.1:pep;Name=PF00306;signature_desc=ATP synthase alpha/beta chain%2C C terminal domain;Ontology_term=GO:0016820,GO:0015991,GO:0033178 ### LTnewLM_5 AUGUSTUS gene 182547 183569 1 + . ID=LTnewLM_050010600 LTnewLM_5 AUGUSTUS mRNA 182547 183569 1 + . ID=LTnewLM_050010600.1;Parent=LTnewLM_050010600 LTnewLM_5 AUGUSTUS CDS 182547 183569 1 + 0 ID=LTnewLM_050010600.1:CDS:1;Parent=LTnewLM_050010600.1 ### LTnewLM_5 . polypeptide 182547 183569 . + . ID=LTnewLM_050010600.1:pep;Derives_from=LTnewLM_050010600.1;orthologous_to=LmjF.05.0520_mRNA;ortholog_cluster=OG0006915;product=term%3DZinc-binding dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00107;Ontology_term=GO:0055114,GO:0016491,GO:0008270 LTnewLM_5 Pfam protein_match 183042 183383 . + . Parent=LTnewLM_050010600.1:pep;Name=PF00107;signature_desc=Zinc-binding dehydrogenase;Ontology_term=GO:0008270,GO:0016491,GO:0055114 ### LTnewLM_5 AUGUSTUS gene 184383 190664 1.99 + . ID=LTnewLM_050010700 LTnewLM_5 AUGUSTUS mRNA 184383 190664 1 + . ID=LTnewLM_050010700.1;Parent=LTnewLM_050010700 LTnewLM_5 AUGUSTUS CDS 184383 190664 1 + 0 ID=LTnewLM_050010700.1:CDS:1;Parent=LTnewLM_050010700.1 LTnewLM_5 AUGUSTUS mRNA 189105 190664 0.99 + . ID=LTnewLM_050010700.2;Parent=LTnewLM_050010700 LTnewLM_5 AUGUSTUS CDS 189105 190664 0.99 + 0 ID=LTnewLM_050010700.2:CDS:1;Parent=LTnewLM_050010700.2 ### LTnewLM_5 . polypeptide 184383 190664 . + . ID=LTnewLM_050010700.1:pep;Derives_from=LTnewLM_050010700.1;orthologous_to=LTnewLM_050010700.2,LmjF.05.0530_mRNA;ortholog_cluster=OG0000488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 . polypeptide 189105 190664 . + . ID=LTnewLM_050010700.2:pep;Derives_from=LTnewLM_050010700.2;orthologous_to=LTnewLM_050010700.1,LmjF.05.0530_mRNA;ortholog_cluster=OG0000488;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 191293 191700 1 + . ID=LTnewLM_050010800 LTnewLM_5 AUGUSTUS mRNA 191293 191700 1 + . ID=LTnewLM_050010800.1;Parent=LTnewLM_050010800 LTnewLM_5 AUGUSTUS CDS 191293 191700 1 + 0 ID=LTnewLM_050010800.1:CDS:1;Parent=LTnewLM_050010800.1 ### LTnewLM_5 . polypeptide 191293 191700 . + . ID=LTnewLM_050010800.1:pep;Derives_from=LTnewLM_050010800.1;orthologous_to=LmjF.05.0540_mRNA;ortholog_cluster=OG0006916;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 . pseudogene 193067 194068 . + . ID=LTnewLM_050010900:pseudogene;coverage=0.994;sequence_ID=0.957;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0550_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 193067 194068 . + . ID=LTnewLM_050010900.1;Parent=LTnewLM_050010900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 193067 194068 . + . ID=LTnewLM_050010900.1:pseudogenic_exon:1;Parent=LTnewLM_050010900.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 193067 194068 . + . ID=LTnewLM_050010900.1:pep;Derives_from=LTnewLM_050010900.1;orthologous_to=LmjF.05.0550_mRNA;ortholog_cluster=OG0007710;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_5 Pfam protein_match 193163 194008 . + . Parent=LTnewLM_050010900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_5 Pfam protein_match 193169 193741 . + . Parent=LTnewLM_050010900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_5 AUGUSTUS gene 195396 196655 1 + . ID=LTnewLM_050011000 LTnewLM_5 AUGUSTUS mRNA 195396 196655 1 + . ID=LTnewLM_050011000.1;Parent=LTnewLM_050011000 LTnewLM_5 AUGUSTUS CDS 195396 196655 1 + 0 ID=LTnewLM_050011000.1:CDS:1;Parent=LTnewLM_050011000.1 ### LTnewLM_5 . polypeptide 195396 196655 . + . ID=LTnewLM_050011000.1:pep;Derives_from=LTnewLM_050011000.1;orthologous_to=LmjF.05.0560_mRNA;ortholog_cluster=OG0006917;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 198319 199551 1 + . ID=LTnewLM_050011100 LTnewLM_5 AUGUSTUS mRNA 198319 199551 1 + . ID=LTnewLM_050011100.1;Parent=LTnewLM_050011100 LTnewLM_5 AUGUSTUS CDS 198319 199551 1 + 0 ID=LTnewLM_050011100.1:CDS:1;Parent=LTnewLM_050011100.1 ### LTnewLM_5 . polypeptide 198319 199551 . + . ID=LTnewLM_050011100.1:pep;Derives_from=LTnewLM_050011100.1;orthologous_to=LmjF.05.0570_mRNA;ortholog_cluster=OG0006918;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 200684 203023 1 + . ID=LTnewLM_050011200 LTnewLM_5 AUGUSTUS mRNA 200684 203023 1 + . ID=LTnewLM_050011200.1;Parent=LTnewLM_050011200 LTnewLM_5 AUGUSTUS CDS 200684 203023 1 + 0 ID=LTnewLM_050011200.1:CDS:1;Parent=LTnewLM_050011200.1 ### LTnewLM_5 . polypeptide 200684 203023 . + . ID=LTnewLM_050011200.1:pep;Derives_from=LTnewLM_050011200.1;orthologous_to=LmjF.05.0580_mRNA;ortholog_cluster=OG0006919;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 205461 208481 1 + . ID=LTnewLM_050011300 LTnewLM_5 AUGUSTUS mRNA 205461 208481 1 + . ID=LTnewLM_050011300.1;Parent=LTnewLM_050011300 LTnewLM_5 AUGUSTUS CDS 205461 208481 1 + 0 ID=LTnewLM_050011300.1:CDS:1;Parent=LTnewLM_050011300.1 ### LTnewLM_5 . polypeptide 205461 208481 . + . ID=LTnewLM_050011300.1:pep;Derives_from=LTnewLM_050011300.1;orthologous_to=LmjF.05.0590_mRNA;ortholog_cluster=OG0006920;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 206406 206621 . + . Parent=LTnewLM_050011300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 206424 207038 . + . Parent=LTnewLM_050011300.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_5 Pfam protein_match 206775 207041 . + . Parent=LTnewLM_050011300.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_5 Pfam protein_match 207597 207830 . + . Parent=LTnewLM_050011300.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_5 AUGUSTUS gene 209127 211841 1 + . ID=LTnewLM_050011400 LTnewLM_5 AUGUSTUS mRNA 209127 211841 1 + . ID=LTnewLM_050011400.1;Parent=LTnewLM_050011400 LTnewLM_5 AUGUSTUS CDS 209127 211841 1 + 0 ID=LTnewLM_050011400.1:CDS:1;Parent=LTnewLM_050011400.1 ### LTnewLM_5 . polypeptide 209127 211841 . + . ID=LTnewLM_050011400.1:pep;Derives_from=LTnewLM_050011400.1;orthologous_to=LmjF.05.0600_mRNA;ortholog_cluster=OG0006921;product=term%3DCOG4 transport protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08318 LTnewLM_5 Pfam protein_match 209697 210983 . + . Parent=LTnewLM_050011400.1:pep;Name=PF08318;signature_desc=COG4 transport protein ### LTnewLM_5 AUGUSTUS gene 212609 215536 1 + . ID=LTnewLM_050011500 LTnewLM_5 AUGUSTUS mRNA 212609 215536 1 + . ID=LTnewLM_050011500.1;Parent=LTnewLM_050011500 LTnewLM_5 AUGUSTUS CDS 212609 215536 1 + 0 ID=LTnewLM_050011500.1:CDS:1;Parent=LTnewLM_050011500.1 ### LTnewLM_5 . polypeptide 212609 215536 . + . ID=LTnewLM_050011500.1:pep;Derives_from=LTnewLM_050011500.1;orthologous_to=LmjF.05.0610_mRNA;ortholog_cluster=OG0006922;product=term%3DSurp module%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01805;Ontology_term=GO:0003723,GO:0006396 LTnewLM_5 Pfam protein_match 213257 213412 . + . Parent=LTnewLM_050011500.1:pep;Name=PF01805;signature_desc=Surp module;Ontology_term=GO:0003723,GO:0006396 ### LTnewLM_5 AUGUSTUS gene 216484 219162 1 + . ID=LTnewLM_050011600 LTnewLM_5 AUGUSTUS mRNA 216484 219162 1 + . ID=LTnewLM_050011600.1;Parent=LTnewLM_050011600 LTnewLM_5 AUGUSTUS CDS 216484 219162 1 + 0 ID=LTnewLM_050011600.1:CDS:1;Parent=LTnewLM_050011600.1 ### LTnewLM_5 . polypeptide 216484 219162 . + . ID=LTnewLM_050011600.1:pep;Derives_from=LTnewLM_050011600.1;orthologous_to=LmjF.05.0620_mRNA;ortholog_cluster=OG0006923;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 220078 223755 1 + . ID=LTnewLM_050011700 LTnewLM_5 AUGUSTUS mRNA 220078 223755 1 + . ID=LTnewLM_050011700.1;Parent=LTnewLM_050011700 LTnewLM_5 AUGUSTUS CDS 220078 223755 1 + 0 ID=LTnewLM_050011700.1:CDS:1;Parent=LTnewLM_050011700.1 ### LTnewLM_5 . polypeptide 220078 223755 . + . ID=LTnewLM_050011700.1:pep;Derives_from=LTnewLM_050011700.1;orthologous_to=LmjF.05.0630_mRNA;ortholog_cluster=OG0006924;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_5 Pfam protein_match 220426 221409 . + . Parent=LTnewLM_050011700.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_5 Pfam protein_match 220447 220686 . + . Parent=LTnewLM_050011700.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_5 AUGUSTUS gene 224637 230353 0.6 + . ID=LTnewLM_050011800 LTnewLM_5 AUGUSTUS mRNA 224637 230353 0.6 + . ID=LTnewLM_050011800.1;Parent=LTnewLM_050011800 LTnewLM_5 AUGUSTUS CDS 224637 224705 0.6 + 0 ID=LTnewLM_050011800.1:CDS:1;Parent=LTnewLM_050011800.1 LTnewLM_5 AUGUSTUS CDS 224759 230353 0.84 + 0 ID=LTnewLM_050011800.1:CDS:2;Parent=LTnewLM_050011800.1 ### LTnewLM_5 . polypeptide 224637 230353 . + . ID=LTnewLM_050011800.1:pep;Derives_from=LTnewLM_050011800.1;orthologous_to=LmjF.05.0640_mRNA;ortholog_cluster=OG0006925;product=term%3DAnkyrin repeats (many copies)/Ankyrin repeats (3 copies)/Ankyrin repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637|Pfam:PF12796|Pfam:PF00023;Ontology_term=GO:0005515 LTnewLM_5 Pfam protein_match 227340 227483 . + . Parent=LTnewLM_050011800.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) LTnewLM_5 Pfam protein_match 227658 227849 . + . Parent=LTnewLM_050011800.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_5 Pfam protein_match 227781 227849 . + . Parent=LTnewLM_050011800.1:pep;Name=PF00023;signature_desc=Ankyrin repeat;Ontology_term=GO:0005515 LTnewLM_5 Pfam protein_match 228330 228653 . + . Parent=LTnewLM_050011800.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) LTnewLM_5 Pfam protein_match 229500 229643 . + . Parent=LTnewLM_050011800.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_5 AUGUSTUS gene 231649 234366 1 + . ID=LTnewLM_050011900 LTnewLM_5 AUGUSTUS mRNA 231649 234366 1 + . ID=LTnewLM_050011900.1;Parent=LTnewLM_050011900 LTnewLM_5 AUGUSTUS CDS 231649 234366 1 + 0 ID=LTnewLM_050011900.1:CDS:1;Parent=LTnewLM_050011900.1 ### LTnewLM_5 . polypeptide 231649 234366 . + . ID=LTnewLM_050011900.1:pep;Derives_from=LTnewLM_050011900.1;orthologous_to=LmjF.05.0650_mRNA;ortholog_cluster=OG0006926;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 236963 237934 1 + . ID=LTnewLM_050012000 LTnewLM_5 AUGUSTUS mRNA 236963 237934 1 + . ID=LTnewLM_050012000.1;Parent=LTnewLM_050012000 LTnewLM_5 AUGUSTUS CDS 236963 237934 1 + 0 ID=LTnewLM_050012000.1:CDS:1;Parent=LTnewLM_050012000.1 ### LTnewLM_5 . polypeptide 236963 237934 . + . ID=LTnewLM_050012000.1:pep;Derives_from=LTnewLM_050012000.1;orthologous_to=LmjF.05.0660_mRNA;ortholog_cluster=OG0006927;product=term%3DNitroreductase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00881 LTnewLM_5 Pfam protein_match 237239 237847 . + . Parent=LTnewLM_050012000.1:pep;Name=PF00881;signature_desc=Nitroreductase family ### LTnewLM_5 AUGUSTUS gene 238947 246422 1 + . ID=LTnewLM_050012100 LTnewLM_5 AUGUSTUS mRNA 238947 246422 1 + . ID=LTnewLM_050012100.1;Parent=LTnewLM_050012100 LTnewLM_5 AUGUSTUS CDS 238947 246422 1 + 0 ID=LTnewLM_050012100.1:CDS:1;Parent=LTnewLM_050012100.1 ### LTnewLM_5 . polypeptide 238947 246422 . + . ID=LTnewLM_050012100.1:pep;Derives_from=LTnewLM_050012100.1;orthologous_to=LmjF.05.0670_mRNA;ortholog_cluster=OG0006928;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 247000 247530 0.69 + . ID=LTnewLM_050012200 LTnewLM_5 AUGUSTUS mRNA 247000 247530 0.69 + . ID=LTnewLM_050012200.1;Parent=LTnewLM_050012200 LTnewLM_5 AUGUSTUS CDS 247000 247530 0.69 + 0 ID=LTnewLM_050012200.1:CDS:1;Parent=LTnewLM_050012200.1 ### LTnewLM_5 . polypeptide 247000 247530 . + . ID=LTnewLM_050012200.1:pep;Derives_from=LTnewLM_050012200.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 248415 249455 1 + . ID=LTnewLM_050012300 LTnewLM_5 AUGUSTUS mRNA 248415 249455 1 + . ID=LTnewLM_050012300.1;Parent=LTnewLM_050012300 LTnewLM_5 AUGUSTUS CDS 248415 249455 1 + 0 ID=LTnewLM_050012300.1:CDS:1;Parent=LTnewLM_050012300.1 ### LTnewLM_5 . polypeptide 248415 249455 . + . ID=LTnewLM_050012300.1:pep;Derives_from=LTnewLM_050012300.1;orthologous_to=LmjF.05.0680_mRNA;ortholog_cluster=OG0006929;product=term%3DSideroflexins%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03820;Ontology_term=GO:0016020,GO:0015075,GO:0006811,GO:0055085 LTnewLM_5 Pfam protein_match 248481 249449 . + . Parent=LTnewLM_050012300.1:pep;Name=PF03820;signature_desc=Sideroflexins;Ontology_term=GO:0015075,GO:0006811,GO:0055085,GO:0016020 ### LTnewLM_5 AUGUSTUS gene 250432 258624 1.78 + . ID=LTnewLM_050012400 LTnewLM_5 AUGUSTUS mRNA 250432 258624 1 + . ID=LTnewLM_050012400.1;Parent=LTnewLM_050012400 LTnewLM_5 AUGUSTUS CDS 250432 258624 1 + 0 ID=LTnewLM_050012400.1:CDS:1;Parent=LTnewLM_050012400.1 LTnewLM_5 AUGUSTUS mRNA 257266 258624 0.78 + . ID=LTnewLM_050012400.2;Parent=LTnewLM_050012400 LTnewLM_5 AUGUSTUS CDS 257266 258624 0.78 + 0 ID=LTnewLM_050012400.2:CDS:1;Parent=LTnewLM_050012400.2 ### LTnewLM_5 . polypeptide 250432 258624 . + . ID=LTnewLM_050012400.1:pep;Derives_from=LTnewLM_050012400.1;orthologous_to=LTnewLM_050012400.2,LmjF.05.0690_mRNA;ortholog_cluster=OG0000489;product=term%3DSperm-tail PG-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07004 LTnewLM_5 Pfam protein_match 253111 253146 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 253858 253944 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 255262 255339 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 255652 255705 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 255901 255978 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 256537 256617 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 256696 256785 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257188 257280 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257713 257757 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257854 257934 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257971 258069 . + . Parent=LTnewLM_050012400.1:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat ### LTnewLM_5 . polypeptide 257266 258624 . + . ID=LTnewLM_050012400.2:pep;Derives_from=LTnewLM_050012400.2;orthologous_to=LTnewLM_050012400.1,LmjF.05.0690_mRNA;ortholog_cluster=OG0000489;product=term%3DSperm-tail PG-rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07004 LTnewLM_5 Pfam protein_match 257578 257652 . + . Parent=LTnewLM_050012400.2:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257713 257757 . + . Parent=LTnewLM_050012400.2:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257854 257934 . + . Parent=LTnewLM_050012400.2:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 257971 258069 . + . Parent=LTnewLM_050012400.2:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat LTnewLM_5 Pfam protein_match 258208 258294 . + . Parent=LTnewLM_050012400.2:pep;Name=PF07004;signature_desc=Sperm-tail PG-rich repeat ### LTnewLM_5 AUGUSTUS gene 261280 266577 1 + . ID=LTnewLM_050012500 LTnewLM_5 AUGUSTUS mRNA 261280 266577 1 + . ID=LTnewLM_050012500.1;Parent=LTnewLM_050012500 LTnewLM_5 AUGUSTUS CDS 261280 266577 1 + 0 ID=LTnewLM_050012500.1:CDS:1;Parent=LTnewLM_050012500.1 ### LTnewLM_5 . polypeptide 261280 266577 . + . ID=LTnewLM_050012500.1:pep;Derives_from=LTnewLM_050012500.1;orthologous_to=LmjF.05.0700_mRNA;ortholog_cluster=OG0006930;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 269835 273986 1 + . ID=LTnewLM_050012600 LTnewLM_5 AUGUSTUS mRNA 269835 273986 1 + . ID=LTnewLM_050012600.1;Parent=LTnewLM_050012600 LTnewLM_5 AUGUSTUS CDS 269835 273986 1 + 0 ID=LTnewLM_050012600.1:CDS:1;Parent=LTnewLM_050012600.1 ### LTnewLM_5 . polypeptide 269835 273986 . + . ID=LTnewLM_050012600.1:pep;Derives_from=LTnewLM_050012600.1;orthologous_to=LmjF.05.0710_mRNA;ortholog_cluster=OG0006931;product=term%3DCyclin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08613;Ontology_term=GO:0000079,GO:0019901 LTnewLM_5 Pfam protein_match 271842 272153 . + . Parent=LTnewLM_050012600.1:pep;Name=PF08613;signature_desc=Cyclin;Ontology_term=GO:0019901,GO:0000079 ### LTnewLM_5 AUGUSTUS gene 276194 280252 1 + . ID=LTnewLM_050012700 LTnewLM_5 AUGUSTUS mRNA 276194 280252 1 + . ID=LTnewLM_050012700.1;Parent=LTnewLM_050012700 LTnewLM_5 AUGUSTUS CDS 276194 280252 1 + 0 ID=LTnewLM_050012700.1:CDS:1;Parent=LTnewLM_050012700.1 ### LTnewLM_5 . polypeptide 276194 280252 . + . ID=LTnewLM_050012700.1:pep;Derives_from=LTnewLM_050012700.1;orthologous_to=LmjF.05.0720_mRNA;ortholog_cluster=OG0006932;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 281898 284114 1 + . ID=LTnewLM_050012800 LTnewLM_5 AUGUSTUS mRNA 281898 284114 1 + . ID=LTnewLM_050012800.1;Parent=LTnewLM_050012800 LTnewLM_5 AUGUSTUS CDS 281898 284114 1 + 0 ID=LTnewLM_050012800.1:CDS:1;Parent=LTnewLM_050012800.1 ### LTnewLM_5 . polypeptide 281898 284114 . + . ID=LTnewLM_050012800.1:pep;Derives_from=LTnewLM_050012800.1;orthologous_to=LmjF.05.0730_mRNA;ortholog_cluster=OG0006933;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 285955 287049 1 + . ID=LTnewLM_050012900 LTnewLM_5 AUGUSTUS mRNA 285955 287049 1 + . ID=LTnewLM_050012900.1;Parent=LTnewLM_050012900 LTnewLM_5 AUGUSTUS CDS 285955 287049 1 + 0 ID=LTnewLM_050012900.1:CDS:1;Parent=LTnewLM_050012900.1 ### LTnewLM_5 . polypeptide 285955 287049 . + . ID=LTnewLM_050012900.1:pep;Derives_from=LTnewLM_050012900.1;orthologous_to=LmjF.05.0740_mRNA;ortholog_cluster=OG0006934;product=term%3DVta1 like/Vta1 C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04652|Pfam:PF18097 LTnewLM_5 Pfam protein_match 286009 286431 . + . Parent=LTnewLM_050012900.1:pep;Name=PF04652;signature_desc=Vta1 like LTnewLM_5 Pfam protein_match 286927 287034 . + . Parent=LTnewLM_050012900.1:pep;Name=PF18097;signature_desc=Vta1 C-terminal domain ### LTnewLM_5 AUGUSTUS gene 288295 290769 1 + . ID=LTnewLM_050013000 LTnewLM_5 AUGUSTUS mRNA 288295 290769 1 + . ID=LTnewLM_050013000.1;Parent=LTnewLM_050013000 LTnewLM_5 AUGUSTUS CDS 288295 290769 1 + 0 ID=LTnewLM_050013000.1:CDS:1;Parent=LTnewLM_050013000.1 ### LTnewLM_5 . polypeptide 288295 290769 . + . ID=LTnewLM_050013000.1:pep;Derives_from=LTnewLM_050013000.1;orthologous_to=LmjF.05.0750_mRNA;ortholog_cluster=OG0006935;product=term%3DFlavodoxin/Radical SAM superfamily/Wyosine base formation%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00258|Pfam:PF04055|Pfam:PF08608;Ontology_term=GO:0003824,GO:0016491,GO:0010181,GO:0051536 LTnewLM_5 Pfam protein_match 288733 289017 . + . Parent=LTnewLM_050013000.1:pep;Name=PF00258;signature_desc=Flavodoxin;Ontology_term=GO:0010181,GO:0016491 LTnewLM_5 Pfam protein_match 289714 290256 . + . Parent=LTnewLM_050013000.1:pep;Name=PF04055;signature_desc=Radical SAM superfamily;Ontology_term=GO:0003824,GO:0051536 LTnewLM_5 Pfam protein_match 290266 290397 . + . Parent=LTnewLM_050013000.1:pep;Name=PF08608;signature_desc=Wyosine base formation ### LTnewLM_5 AUGUSTUS gene 291808 296400 1 + . ID=LTnewLM_050013100 LTnewLM_5 AUGUSTUS mRNA 291808 296400 1 + . ID=LTnewLM_050013100.1;Parent=LTnewLM_050013100 LTnewLM_5 AUGUSTUS CDS 291808 296400 1 + 0 ID=LTnewLM_050013100.1:CDS:1;Parent=LTnewLM_050013100.1 ### LTnewLM_5 . polypeptide 291808 296400 . + . ID=LTnewLM_050013100.1:pep;Derives_from=LTnewLM_050013100.1;orthologous_to=LmjF.05.0760_mRNA;ortholog_cluster=OG0006936;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_5 Pfam protein_match 293299 293808 . + . Parent=LTnewLM_050013100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_5 Pfam protein_match 293326 293520 . + . Parent=LTnewLM_050013100.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_5 Pfam protein_match 294313 294903 . + . Parent=LTnewLM_050013100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_5 AUGUSTUS gene 298240 302385 1 + . ID=LTnewLM_050013200 LTnewLM_5 AUGUSTUS mRNA 298240 302385 1 + . ID=LTnewLM_050013200.1;Parent=LTnewLM_050013200 LTnewLM_5 AUGUSTUS CDS 298240 302385 1 + 0 ID=LTnewLM_050013200.1:CDS:1;Parent=LTnewLM_050013200.1 ### LTnewLM_5 . polypeptide 298240 302385 . + . ID=LTnewLM_050013200.1:pep;Derives_from=LTnewLM_050013200.1;orthologous_to=LmjF.05.0770_mRNA;ortholog_cluster=OG0006937;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 303838 304281 1 + . ID=LTnewLM_050013300 LTnewLM_5 AUGUSTUS mRNA 303838 304281 1 + . ID=LTnewLM_050013300.1;Parent=LTnewLM_050013300 LTnewLM_5 AUGUSTUS CDS 303838 304281 1 + 0 ID=LTnewLM_050013300.1:CDS:1;Parent=LTnewLM_050013300.1 ### LTnewLM_5 . polypeptide 303838 304281 . + . ID=LTnewLM_050013300.1:pep;Derives_from=LTnewLM_050013300.1;orthologous_to=LmjF.05.0780_mRNA;ortholog_cluster=OG0006938;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 306326 307489 1 + . ID=LTnewLM_050013400 LTnewLM_5 AUGUSTUS mRNA 306326 307489 1 + . ID=LTnewLM_050013400.1;Parent=LTnewLM_050013400 LTnewLM_5 AUGUSTUS CDS 306326 307489 1 + 0 ID=LTnewLM_050013400.1:CDS:1;Parent=LTnewLM_050013400.1 ### LTnewLM_5 . polypeptide 306326 307489 . + . ID=LTnewLM_050013400.1:pep;Derives_from=LTnewLM_050013400.1;orthologous_to=LmjF.05.0790_mRNA;ortholog_cluster=OG0006939;product=term%3DMitochondrial glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02330;Ontology_term=GO:0005759 LTnewLM_5 Pfam protein_match 307304 307477 . + . Parent=LTnewLM_050013400.1:pep;Name=PF02330;signature_desc=Mitochondrial glycoprotein;Ontology_term=GO:0005759 ### LTnewLM_5 AUGUSTUS gene 308119 309450 1 + . ID=LTnewLM_050013500 LTnewLM_5 AUGUSTUS mRNA 308119 309450 1 + . ID=LTnewLM_050013500.1;Parent=LTnewLM_050013500 LTnewLM_5 AUGUSTUS CDS 308119 309450 1 + 0 ID=LTnewLM_050013500.1:CDS:1;Parent=LTnewLM_050013500.1 ### LTnewLM_5 . polypeptide 308119 309450 . + . ID=LTnewLM_050013500.1:pep;Derives_from=LTnewLM_050013500.1;orthologous_to=LmjF.05.0800_mRNA;ortholog_cluster=OG0006940;product=term%3DMYND finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753 LTnewLM_5 Pfam protein_match 309076 309216 . + . Parent=LTnewLM_050013500.1:pep;Name=PF01753;signature_desc=MYND finger ### LTnewLM_5 AUGUSTUS gene 310246 310737 1 + . ID=LTnewLM_050013600 LTnewLM_5 AUGUSTUS mRNA 310246 310737 1 + . ID=LTnewLM_050013600.1;Parent=LTnewLM_050013600 LTnewLM_5 AUGUSTUS CDS 310246 310737 1 + 0 ID=LTnewLM_050013600.1:CDS:1;Parent=LTnewLM_050013600.1 ### LTnewLM_5 . polypeptide 310246 310737 . + . ID=LTnewLM_050013600.1:pep;Derives_from=LTnewLM_050013600.1;orthologous_to=LmjF.05.0810_mRNA;ortholog_cluster=OG0006941;product=term%3DGot1/Sft2-like family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04178;Ontology_term=GO:0016192 LTnewLM_5 Pfam protein_match 310360 310683 . + . Parent=LTnewLM_050013600.1:pep;Name=PF04178;signature_desc=Got1/Sft2-like family;Ontology_term=GO:0016192 ### LTnewLM_5 AUGUSTUS gene 311614 314439 1 + . ID=LTnewLM_050013700 LTnewLM_5 AUGUSTUS mRNA 311614 314439 1 + . ID=LTnewLM_050013700.1;Parent=LTnewLM_050013700 LTnewLM_5 AUGUSTUS CDS 311614 314439 1 + 0 ID=LTnewLM_050013700.1:CDS:1;Parent=LTnewLM_050013700.1 ### LTnewLM_5 . polypeptide 311614 314439 . + . ID=LTnewLM_050013700.1:pep;Derives_from=LTnewLM_050013700.1;orthologous_to=LmjF.05.0820_mRNA;ortholog_cluster=OG0006942;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 315516 316436 1 + . ID=LTnewLM_050013800 LTnewLM_5 AUGUSTUS mRNA 315516 316436 1 + . ID=LTnewLM_050013800.1;Parent=LTnewLM_050013800 LTnewLM_5 AUGUSTUS CDS 315516 316436 1 + 0 ID=LTnewLM_050013800.1:CDS:1;Parent=LTnewLM_050013800.1 ### LTnewLM_5 . polypeptide 315516 316436 . + . ID=LTnewLM_050013800.1:pep;Derives_from=LTnewLM_050013800.1;orthologous_to=LmjF.05.0830_mRNA;ortholog_cluster=OG0006943;product=term%3DPhosphorylase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01048;Ontology_term=GO:0003824,GO:0009116 LTnewLM_5 Pfam protein_match 315549 316280 . + . Parent=LTnewLM_050013800.1:pep;Name=PF01048;signature_desc=Phosphorylase superfamily;Ontology_term=GO:0003824,GO:0009116 ### LTnewLM_5 AUGUSTUS gene 319489 323757 1 + . ID=LTnewLM_050013900 LTnewLM_5 AUGUSTUS mRNA 319489 323757 1 + . ID=LTnewLM_050013900.1;Parent=LTnewLM_050013900 LTnewLM_5 AUGUSTUS CDS 319489 323757 1 + 0 ID=LTnewLM_050013900.1:CDS:1;Parent=LTnewLM_050013900.1 ### LTnewLM_5 . polypeptide 319489 323757 . + . ID=LTnewLM_050013900.1:pep;Derives_from=LTnewLM_050013900.1;orthologous_to=LmjF.05.0840_mRNA;ortholog_cluster=OG0006944;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 325093 327073 0.71 + . ID=LTnewLM_050014000 LTnewLM_5 AUGUSTUS mRNA 325093 327073 0.71 + . ID=LTnewLM_050014000.1;Parent=LTnewLM_050014000 LTnewLM_5 AUGUSTUS CDS 325093 325226 0.71 + 0 ID=LTnewLM_050014000.1:CDS:1;Parent=LTnewLM_050014000.1 LTnewLM_5 AUGUSTUS CDS 325297 327073 0.83 + 1 ID=LTnewLM_050014000.1:CDS:2;Parent=LTnewLM_050014000.1 ### LTnewLM_5 . polypeptide 325093 327073 . + . ID=LTnewLM_050014000.1:pep;Derives_from=LTnewLM_050014000.1;orthologous_to=LmjF.05.0850_mRNA;ortholog_cluster=OG0006945;product=term%3Dzinc-finger of a C2HC-type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13913 LTnewLM_5 Pfam protein_match 326497 326568 . + . Parent=LTnewLM_050014000.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type LTnewLM_5 Pfam protein_match 326887 326952 . + . Parent=LTnewLM_050014000.1:pep;Name=PF13913;signature_desc=zinc-finger of a C2HC-type ### LTnewLM_5 AUGUSTUS gene 328150 328617 1 + . ID=LTnewLM_050014100 LTnewLM_5 AUGUSTUS mRNA 328150 328617 1 + . ID=LTnewLM_050014100.1;Parent=LTnewLM_050014100 LTnewLM_5 AUGUSTUS CDS 328150 328617 1 + 0 ID=LTnewLM_050014100.1:CDS:1;Parent=LTnewLM_050014100.1 ### LTnewLM_5 . polypeptide 328150 328617 . + . ID=LTnewLM_050014100.1:pep;Derives_from=LTnewLM_050014100.1;orthologous_to=LmjF.05.0860_mRNA;ortholog_cluster=OG0006946;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 . pseudogene 329654 335525 . + . ID=LTnewLM_050014200:pseudogene;coverage=0.994;sequence_ID=0.907;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0870_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 329654 335525 . + . ID=LTnewLM_050014200.1;Parent=LTnewLM_050014200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 329654 335525 . + . ID=LTnewLM_050014200.1:pseudogenic_exon:1;Parent=LTnewLM_050014200.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 329654 335525 . + . ID=LTnewLM_050014200.1:pep;Derives_from=LTnewLM_050014200.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 336470 337087 1 + . ID=LTnewLM_050014300 LTnewLM_5 AUGUSTUS mRNA 336470 337087 1 + . ID=LTnewLM_050014300.1;Parent=LTnewLM_050014300 LTnewLM_5 AUGUSTUS CDS 336470 337087 1 + 0 ID=LTnewLM_050014300.1:CDS:1;Parent=LTnewLM_050014300.1 ### LTnewLM_5 . polypeptide 336470 337087 . + . ID=LTnewLM_050014300.1:pep;Derives_from=LTnewLM_050014300.1;orthologous_to=LmjF.05.0880_mRNA;ortholog_cluster=OG0006947;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 338296 344235 1 + . ID=LTnewLM_050014400 LTnewLM_5 AUGUSTUS mRNA 338296 344235 1 + . ID=LTnewLM_050014400.1;Parent=LTnewLM_050014400 LTnewLM_5 AUGUSTUS CDS 338296 344235 1 + 0 ID=LTnewLM_050014400.1:CDS:1;Parent=LTnewLM_050014400.1 ### LTnewLM_5 . polypeptide 338296 344235 . + . ID=LTnewLM_050014400.1:pep;Derives_from=LTnewLM_050014400.1;orthologous_to=LmjF.05.0890_mRNA;ortholog_cluster=OG0006948;product=term%3DMono-functional DNA-alkylating methyl methanesulfonate N-term/CPSF A subunit region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10433|Pfam:PF03178;Ontology_term=GO:0003676,GO:0005634 LTnewLM_5 Pfam protein_match 339220 340809 . + . Parent=LTnewLM_050014400.1:pep;Name=PF10433;signature_desc=Mono-functional DNA-alkylating methyl methanesulfonate N-term LTnewLM_5 Pfam protein_match 343546 344037 . + . Parent=LTnewLM_050014400.1:pep;Name=PF03178;signature_desc=CPSF A subunit region;Ontology_term=GO:0003676,GO:0005634 ### LTnewLM_5 AUGUSTUS gene 345331 346191 1 + . ID=LTnewLM_050014500 LTnewLM_5 AUGUSTUS mRNA 345331 346191 1 + . ID=LTnewLM_050014500.1;Parent=LTnewLM_050014500 LTnewLM_5 AUGUSTUS CDS 345331 346191 1 + 0 ID=LTnewLM_050014500.1:CDS:1;Parent=LTnewLM_050014500.1 ### LTnewLM_5 . polypeptide 345331 346191 . + . ID=LTnewLM_050014500.1:pep;Derives_from=LTnewLM_050014500.1;orthologous_to=LmjF.05.0900_mRNA;ortholog_cluster=OG0006949;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 348004 351303 1 + . ID=LTnewLM_050014600 LTnewLM_5 AUGUSTUS mRNA 348004 351303 1 + . ID=LTnewLM_050014600.1;Parent=LTnewLM_050014600 LTnewLM_5 AUGUSTUS CDS 348004 351303 1 + 0 ID=LTnewLM_050014600.1:CDS:1;Parent=LTnewLM_050014600.1 ### LTnewLM_5 . polypeptide 348004 351303 . + . ID=LTnewLM_050014600.1:pep;Derives_from=LTnewLM_050014600.1;orthologous_to=LmjF.05.0910_mRNA;ortholog_cluster=OG0006950;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 351819 355085 1 + . ID=LTnewLM_050014700 LTnewLM_5 AUGUSTUS mRNA 351819 355085 1 + . ID=LTnewLM_050014700.1;Parent=LTnewLM_050014700 LTnewLM_5 AUGUSTUS CDS 351819 355085 1 + 0 ID=LTnewLM_050014700.1:CDS:1;Parent=LTnewLM_050014700.1 ### LTnewLM_5 . polypeptide 351819 355085 . + . ID=LTnewLM_050014700.1:pep;Derives_from=LTnewLM_050014700.1;orthologous_to=LmjF.05.0920_mRNA;ortholog_cluster=OG0006951;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_5 Pfam protein_match 353667 354524 . + . Parent=LTnewLM_050014700.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_5 AUGUSTUS gene 357223 358605 1 + . ID=LTnewLM_050014800 LTnewLM_5 AUGUSTUS mRNA 357223 358605 1 + . ID=LTnewLM_050014800.1;Parent=LTnewLM_050014800 LTnewLM_5 AUGUSTUS CDS 357223 358605 1 + 0 ID=LTnewLM_050014800.1:CDS:1;Parent=LTnewLM_050014800.1 ### LTnewLM_5 . polypeptide 357223 358605 . + . ID=LTnewLM_050014800.1:pep;Derives_from=LTnewLM_050014800.1;orthologous_to=LmjF.05.0930_mRNA;ortholog_cluster=OG0006952;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_5 Pfam protein_match 357250 357591 . + . Parent=LTnewLM_050014800.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_5 AUGUSTUS gene 359581 363534 1 + . ID=LTnewLM_050014900 LTnewLM_5 AUGUSTUS mRNA 359581 363534 1 + . ID=LTnewLM_050014900.1;Parent=LTnewLM_050014900 LTnewLM_5 AUGUSTUS CDS 359581 363534 1 + 0 ID=LTnewLM_050014900.1:CDS:1;Parent=LTnewLM_050014900.1 ### LTnewLM_5 . polypeptide 359581 363534 . + . ID=LTnewLM_050014900.1:pep;Derives_from=LTnewLM_050014900.1;orthologous_to=LmjF.05.0940_mRNA;ortholog_cluster=OG0006953;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 365878 368601 1 + . ID=LTnewLM_050015000 LTnewLM_5 AUGUSTUS mRNA 365878 368601 1 + . ID=LTnewLM_050015000.1;Parent=LTnewLM_050015000 LTnewLM_5 AUGUSTUS CDS 365878 368601 1 + 0 ID=LTnewLM_050015000.1:CDS:1;Parent=LTnewLM_050015000.1 ### LTnewLM_5 . polypeptide 365878 368601 . + . ID=LTnewLM_050015000.1:pep;Derives_from=LTnewLM_050015000.1;orthologous_to=LmjF.05.0950_mRNA;ortholog_cluster=OG0006954;product=term%3DPeptidase family M28%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04389 LTnewLM_5 Pfam protein_match 367228 367347 . + . Parent=LTnewLM_050015000.1:pep;Name=PF04389;signature_desc=Peptidase family M28 LTnewLM_5 Pfam protein_match 368215 368541 . + . Parent=LTnewLM_050015000.1:pep;Name=PF04389;signature_desc=Peptidase family M28 ### LTnewLM_5 AUGUSTUS gene 369851 371890 1 + . ID=LTnewLM_050015100 LTnewLM_5 AUGUSTUS mRNA 369851 371890 1 + . ID=LTnewLM_050015100.1;Parent=LTnewLM_050015100 LTnewLM_5 AUGUSTUS CDS 369851 371890 1 + 0 ID=LTnewLM_050015100.1:CDS:1;Parent=LTnewLM_050015100.1 ### LTnewLM_5 . polypeptide 369851 371890 . + . ID=LTnewLM_050015100.1:pep;Derives_from=LTnewLM_050015100.1;orthologous_to=LmjF.05.0960_mRNA;ortholog_cluster=OG0006955;product=term%3DPeptidase family M49%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03571 LTnewLM_5 Pfam protein_match 370268 371866 . + . Parent=LTnewLM_050015100.1:pep;Name=PF03571;signature_desc=Peptidase family M49 ### LTnewLM_5 Aragorn_1.2.36 gene 374011 374082 . + . ID=LTnewLM_050015200 LTnewLM_5 Aragorn_1.2.36 tRNA 374011 374082 . + . ID=LTnewLM_050015200:tRNA;Parent=LTnewLM_050015200;aa=Arg;anticodon=acg;gc_content=54.2 ### LTnewLM_5 GenomeTools gene 374143 374249 55.1 + . ID=LTnewLM_050015300 LTnewLM_5 INFERNAL rRNA 374143 374249 55.1 + . ID=LTnewLM_050015300:rRNA;Parent=LTnewLM_050015300;gc=0.56;evalue=2.1e-10;score=55.1;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_5 AUGUSTUS gene 376959 377297 0.77 - . ID=LTnewLM_050015400 LTnewLM_5 AUGUSTUS mRNA 376959 377297 0.77 - . ID=LTnewLM_050015400.1;Parent=LTnewLM_050015400 LTnewLM_5 AUGUSTUS CDS 376959 377297 0.77 - 0 ID=LTnewLM_050015400.1:CDS:1;Parent=LTnewLM_050015400.1 ### LTnewLM_5 . polypeptide 376959 377297 . - . ID=LTnewLM_050015400.1:pep;Derives_from=LTnewLM_050015400.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 382758 383870 1 - . ID=LTnewLM_050015500 LTnewLM_5 AUGUSTUS mRNA 382758 383870 1 - . ID=LTnewLM_050015500.1;Parent=LTnewLM_050015500 LTnewLM_5 AUGUSTUS CDS 382758 383870 1 - 0 ID=LTnewLM_050015500.1:CDS:1;Parent=LTnewLM_050015500.1 ### LTnewLM_5 . polypeptide 382758 383870 . - . ID=LTnewLM_050015500.1:pep;Derives_from=LTnewLM_050015500.1;orthologous_to=LmjF.05.0970_mRNA;ortholog_cluster=OG0006956;product=term%3DRhodanese-like domain/Domain of unknown function (DUF1930)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581|Pfam:PF09122 LTnewLM_5 Pfam protein_match 382767 382967 . - . Parent=LTnewLM_050015500.1:pep;Name=PF09122;signature_desc=Domain of unknown function (DUF1930) LTnewLM_5 Pfam protein_match 383466 383813 . - . Parent=LTnewLM_050015500.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_5 AUGUSTUS gene 385365 386819 1 - . ID=LTnewLM_050015600 LTnewLM_5 AUGUSTUS mRNA 385365 386819 1 - . ID=LTnewLM_050015600.1;Parent=LTnewLM_050015600 LTnewLM_5 AUGUSTUS CDS 385365 386819 1 - 0 ID=LTnewLM_050015600.1:CDS:1;Parent=LTnewLM_050015600.1 ### LTnewLM_5 . polypeptide 385365 386819 . - . ID=LTnewLM_050015600.1:pep;Derives_from=LTnewLM_050015600.1;orthologous_to=LmjF.05.0980_mRNA;ortholog_cluster=OG0006957;product=term%3DRespiratory-chain NADH dehydrogenase 51 Kd subunit/SLBB domain/NADH-ubiquinone oxidoreductase-F iron-sulfur binding region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01512|Pfam:PF10531|Pfam:PF10589;Ontology_term=GO:0051539 LTnewLM_5 Pfam protein_match 385512 385754 . - . Parent=LTnewLM_050015600.1:pep;Name=PF10589;signature_desc=NADH-ubiquinone oxidoreductase-F iron-sulfur binding region;Ontology_term=GO:0051539 LTnewLM_5 Pfam protein_match 385881 386027 . - . Parent=LTnewLM_050015600.1:pep;Name=PF10531;signature_desc=SLBB domain LTnewLM_5 Pfam protein_match 386109 386618 . - . Parent=LTnewLM_050015600.1:pep;Name=PF01512;signature_desc=Respiratory-chain NADH dehydrogenase 51 Kd subunit ### LTnewLM_5 . pseudogene 387503 387775 . - . ID=LTnewLM_050015700:pseudogene;coverage=1.0;sequence_ID=0.974;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.0990_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 387503 387775 . - . ID=LTnewLM_050015700.1;Parent=LTnewLM_050015700:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 387503 387775 . - . ID=LTnewLM_050015700.1:pseudogenic_exon:1;Parent=LTnewLM_050015700.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 387503 387775 . - . ID=LTnewLM_050015700.1:pep;Derives_from=LTnewLM_050015700.1;orthologous_to=LmjF.05.0990_mRNA;ortholog_cluster=OG0007711;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 389532 389843 1 - . ID=LTnewLM_050015800 LTnewLM_5 AUGUSTUS mRNA 389532 389843 1 - . ID=LTnewLM_050015800.1;Parent=LTnewLM_050015800 LTnewLM_5 AUGUSTUS CDS 389532 389843 1 - 0 ID=LTnewLM_050015800.1:CDS:1;Parent=LTnewLM_050015800.1 ### LTnewLM_5 . polypeptide 389532 389843 . - . ID=LTnewLM_050015800.1:pep;Derives_from=LTnewLM_050015800.1;orthologous_to=LmjF.05.1000_mRNA;ortholog_cluster=OG0006958;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 390690 392534 1 - . ID=LTnewLM_050015900 LTnewLM_5 AUGUSTUS mRNA 390690 392534 1 - . ID=LTnewLM_050015900.1;Parent=LTnewLM_050015900 LTnewLM_5 AUGUSTUS CDS 390690 392534 1 - 0 ID=LTnewLM_050015900.1:CDS:1;Parent=LTnewLM_050015900.1 ### LTnewLM_5 . polypeptide 390690 392534 . - . ID=LTnewLM_050015900.1:pep;Derives_from=LTnewLM_050015900.1;orthologous_to=LmjF.05.1010_mRNA;ortholog_cluster=OG0006959;product=term%3DPutative RNA methylase family UPF0020%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01170 LTnewLM_5 Pfam protein_match 391392 391865 . - . Parent=LTnewLM_050015900.1:pep;Name=PF01170;signature_desc=Putative RNA methylase family UPF0020 ### LTnewLM_5 AUGUSTUS gene 393513 396272 1 - . ID=LTnewLM_050016000 LTnewLM_5 AUGUSTUS mRNA 393513 396272 1 - . ID=LTnewLM_050016000.1;Parent=LTnewLM_050016000 LTnewLM_5 AUGUSTUS CDS 393513 396272 1 - 0 ID=LTnewLM_050016000.1:CDS:1;Parent=LTnewLM_050016000.1 ### LTnewLM_5 . polypeptide 393513 396272 . - . ID=LTnewLM_050016000.1:pep;Derives_from=LTnewLM_050016000.1;orthologous_to=LmjF.05.1020_mRNA;ortholog_cluster=OG0006960;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 396794 397231 1 - . ID=LTnewLM_050016100 LTnewLM_5 AUGUSTUS mRNA 396794 397231 1 - . ID=LTnewLM_050016100.1;Parent=LTnewLM_050016100 LTnewLM_5 AUGUSTUS CDS 396794 397231 1 - 0 ID=LTnewLM_050016100.1:CDS:1;Parent=LTnewLM_050016100.1 ### LTnewLM_5 . polypeptide 396794 397231 . - . ID=LTnewLM_050016100.1:pep;Derives_from=LTnewLM_050016100.1;orthologous_to=LmjF.05.1030_mRNA;ortholog_cluster=OG0006961;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 397726 398799 1 - . ID=LTnewLM_050016200 LTnewLM_5 AUGUSTUS mRNA 397726 398799 1 - . ID=LTnewLM_050016200.1;Parent=LTnewLM_050016200 LTnewLM_5 AUGUSTUS CDS 397726 398799 1 - 0 ID=LTnewLM_050016200.1:CDS:1;Parent=LTnewLM_050016200.1 ### LTnewLM_5 . polypeptide 397726 398799 . - . ID=LTnewLM_050016200.1:pep;Derives_from=LTnewLM_050016200.1;orthologous_to=LmjF.05.1040_mRNA;ortholog_cluster=OG0006962;product=term%3DSPFH domain / Band 7 family/C-terminal region of band_7%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01145|Pfam:PF16200 LTnewLM_5 Pfam protein_match 397768 397950 . - . Parent=LTnewLM_050016200.1:pep;Name=PF16200;signature_desc=C-terminal region of band_7 LTnewLM_5 Pfam protein_match 398101 398610 . - . Parent=LTnewLM_050016200.1:pep;Name=PF01145;signature_desc=SPFH domain / Band 7 family ### LTnewLM_5 . gene 400259 401590 . + . ID=LTnewLM_050016300;has_internal_stop=false;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.05.1050:mRNA 1 444;original_prot_length=444 LTnewLM_5 . mRNA 400259 401590 . + . ID=LTnewLM_050016300.1;Parent=LTnewLM_050016300 LTnewLM_5 . CDS 400259 401590 . + 0 ID=LTnewLM_050016300.1:CDS:1;Parent=LTnewLM_050016300.1 ### LTnewLM_5 . polypeptide 400259 401590 . + . ID=LTnewLM_050016300.1:pep;Derives_from=LTnewLM_050016300.1;orthologous_to=LmjF.05.1050_mRNA;ortholog_cluster=OG0006963;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 402533 403969 1 + . ID=LTnewLM_050016400 LTnewLM_5 AUGUSTUS mRNA 402533 403969 1 + . ID=LTnewLM_050016400.1;Parent=LTnewLM_050016400 LTnewLM_5 AUGUSTUS CDS 402533 403969 1 + 0 ID=LTnewLM_050016400.1:CDS:1;Parent=LTnewLM_050016400.1 ### LTnewLM_5 . polypeptide 402533 403969 . + . ID=LTnewLM_050016400.1:pep;Derives_from=LTnewLM_050016400.1;orthologous_to=LmjF.05.1060_mRNA;ortholog_cluster=OG0006964;product=term%3DAFG1-like ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03969;Ontology_term=GO:0005524 LTnewLM_5 Pfam protein_match 402842 403753 . + . Parent=LTnewLM_050016400.1:pep;Name=PF03969;signature_desc=AFG1-like ATPase;Ontology_term=GO:0005524 ### LTnewLM_5 . pseudogene 404764 406332 . + . ID=LTnewLM_050016500:pseudogene;coverage=0.996;sequence_ID=0.956;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.05.1070_0;has_internal_stop=true LTnewLM_5 . pseudogenic_transcript 404764 406332 . + . ID=LTnewLM_050016500.1;Parent=LTnewLM_050016500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_5 . pseudogenic_exon 404764 406332 . + . ID=LTnewLM_050016500.1:pseudogenic_exon:1;Parent=LTnewLM_050016500.1;extra_copy_number=0 ### LTnewLM_5 . polypeptide 404764 406332 . + . ID=LTnewLM_050016500.1:pep;Derives_from=LTnewLM_050016500.1;orthologous_to=LmjF.05.1070_mRNA;ortholog_cluster=OG0007712;product=term%3DLegume-like lectin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03388;Ontology_term=GO:0016020 LTnewLM_5 Pfam protein_match 404941 405222 . + . Parent=LTnewLM_050016500.1:pep;Name=PF03388;signature_desc=Legume-like lectin family;Ontology_term=GO:0016020 ### LTnewLM_5 AUGUSTUS gene 407687 409867 1 + . ID=LTnewLM_050016600 LTnewLM_5 AUGUSTUS mRNA 407687 409867 1 + . ID=LTnewLM_050016600.1;Parent=LTnewLM_050016600 LTnewLM_5 AUGUSTUS CDS 407687 409867 1 + 0 ID=LTnewLM_050016600.1:CDS:1;Parent=LTnewLM_050016600.1 ### LTnewLM_5 . polypeptide 407687 409867 . + . ID=LTnewLM_050016600.1:pep;Derives_from=LTnewLM_050016600.1;orthologous_to=LmjF.05.1080_mRNA;ortholog_cluster=OG0006965;product=term%3DMORN repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02493 LTnewLM_5 Pfam protein_match 408425 408487 . + . Parent=LTnewLM_050016600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 408497 408562 . + . Parent=LTnewLM_050016600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 408566 408628 . + . Parent=LTnewLM_050016600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 408635 408697 . + . Parent=LTnewLM_050016600.1:pep;Name=PF02493;signature_desc=MORN repeat LTnewLM_5 Pfam protein_match 408773 408820 . + . Parent=LTnewLM_050016600.1:pep;Name=PF02493;signature_desc=MORN repeat ### LTnewLM_5 AUGUSTUS gene 412422 414146 1 + . ID=LTnewLM_050016700 LTnewLM_5 AUGUSTUS mRNA 412422 414146 1 + . ID=LTnewLM_050016700.1;Parent=LTnewLM_050016700 LTnewLM_5 AUGUSTUS CDS 412422 414146 1 + 0 ID=LTnewLM_050016700.1:CDS:1;Parent=LTnewLM_050016700.1 ### LTnewLM_5 . polypeptide 412422 414146 . + . ID=LTnewLM_050016700.1:pep;Derives_from=LTnewLM_050016700.1;orthologous_to=LmjF.05.1090_mRNA;ortholog_cluster=OG0006966;product=term%3DN terminus of Rad21 / Rec8 like protein/Conserved region of Rad21 / Rec8 like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04825|Pfam:PF04824;Ontology_term=GO:0000228,GO:0005515 LTnewLM_5 Pfam protein_match 412422 412688 . + . Parent=LTnewLM_050016700.1:pep;Name=PF04825;signature_desc=N terminus of Rad21 / Rec8 like protein;Ontology_term=GO:0005515 LTnewLM_5 Pfam protein_match 413979 414077 . + . Parent=LTnewLM_050016700.1:pep;Name=PF04824;signature_desc=Conserved region of Rad21 / Rec8 like protein;Ontology_term=GO:0000228 ### LTnewLM_5 AUGUSTUS gene 416677 417414 1 + . ID=LTnewLM_050016800 LTnewLM_5 AUGUSTUS mRNA 416677 417414 1 + . ID=LTnewLM_050016800.1;Parent=LTnewLM_050016800 LTnewLM_5 AUGUSTUS CDS 416677 417414 1 + 0 ID=LTnewLM_050016800.1:CDS:1;Parent=LTnewLM_050016800.1 ### LTnewLM_5 . polypeptide 416677 417414 . + . ID=LTnewLM_050016800.1:pep;Derives_from=LTnewLM_050016800.1;orthologous_to=LmjF.05.1100_mRNA;ortholog_cluster=OG0006967;product=term%3DMethyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13847|Pfam:PF13649|Pfam:PF08241;Ontology_term=GO:0008152,GO:0008168 LTnewLM_5 Pfam protein_match 416803 417192 . + . Parent=LTnewLM_050016800.1:pep;Name=PF13847;signature_desc=Methyltransferase domain LTnewLM_5 Pfam protein_match 416812 417138 . + . Parent=LTnewLM_050016800.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_5 Pfam protein_match 416815 417150 . + . Parent=LTnewLM_050016800.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 ### LTnewLM_5 AUGUSTUS gene 421329 425060 1 + . ID=LTnewLM_050016900 LTnewLM_5 AUGUSTUS mRNA 421329 425060 1 + . ID=LTnewLM_050016900.1;Parent=LTnewLM_050016900 LTnewLM_5 AUGUSTUS CDS 421329 425060 1 + 0 ID=LTnewLM_050016900.1:CDS:1;Parent=LTnewLM_050016900.1 ### LTnewLM_5 . polypeptide 421329 425060 . + . ID=LTnewLM_050016900.1:pep;Derives_from=LTnewLM_050016900.1;orthologous_to=LmjF.05.1110_mRNA;ortholog_cluster=OG0006968;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 428344 428682 1 + . ID=LTnewLM_050017000 LTnewLM_5 AUGUSTUS mRNA 428344 428682 1 + . ID=LTnewLM_050017000.1;Parent=LTnewLM_050017000 LTnewLM_5 AUGUSTUS CDS 428344 428682 1 + 0 ID=LTnewLM_050017000.1:CDS:1;Parent=LTnewLM_050017000.1 ### LTnewLM_5 . polypeptide 428344 428682 . + . ID=LTnewLM_050017000.1:pep;Derives_from=LTnewLM_050017000.1;orthologous_to=LmjF.05.1120_mRNA;ortholog_cluster=OG0006969;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 429756 429986 0.66 - . ID=LTnewLM_050017100 LTnewLM_5 AUGUSTUS mRNA 429756 429986 0.66 - . ID=LTnewLM_050017100.1;Parent=LTnewLM_050017100 LTnewLM_5 AUGUSTUS CDS 429756 429986 0.66 - 0 ID=LTnewLM_050017100.1:CDS:1;Parent=LTnewLM_050017100.1 ### LTnewLM_5 . polypeptide 429756 429986 . - . ID=LTnewLM_050017100.1:pep;Derives_from=LTnewLM_050017100.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 431594 433120 1 - . ID=LTnewLM_050017200 LTnewLM_5 AUGUSTUS mRNA 431594 433120 1 - . ID=LTnewLM_050017200.1;Parent=LTnewLM_050017200 LTnewLM_5 AUGUSTUS CDS 431594 433120 1 - 0 ID=LTnewLM_050017200.1:CDS:1;Parent=LTnewLM_050017200.1 ### LTnewLM_5 . polypeptide 431594 433120 . - . ID=LTnewLM_050017200.1:pep;Derives_from=LTnewLM_050017200.1;orthologous_to=LmjF.05.1130_mRNA;ortholog_cluster=OG0006970;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 433910 434983 1 - . ID=LTnewLM_050017300 LTnewLM_5 AUGUSTUS mRNA 433910 434983 1 - . ID=LTnewLM_050017300.1;Parent=LTnewLM_050017300 LTnewLM_5 AUGUSTUS CDS 433910 434983 1 - 0 ID=LTnewLM_050017300.1:CDS:1;Parent=LTnewLM_050017300.1 ### LTnewLM_5 . polypeptide 433910 434983 . - . ID=LTnewLM_050017300.1:pep;Derives_from=LTnewLM_050017300.1;orthologous_to=LmjF.05.1140_mRNA;ortholog_cluster=OG0006971;product=term%3DATP synthase (C/AC39) subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01992 LTnewLM_5 Pfam protein_match 433940 434941 . - . Parent=LTnewLM_050017300.1:pep;Name=PF01992;signature_desc=ATP synthase (C/AC39) subunit ### LTnewLM_5 AUGUSTUS gene 435748 438499 0.71 - . ID=LTnewLM_050017400 LTnewLM_5 AUGUSTUS mRNA 435748 438499 0.71 - . ID=LTnewLM_050017400.1;Parent=LTnewLM_050017400 LTnewLM_5 AUGUSTUS CDS 435748 437448 0.72 - 0 ID=LTnewLM_050017400.1:CDS:1;Parent=LTnewLM_050017400.1 LTnewLM_5 AUGUSTUS CDS 437501 438499 0.71 - 0 ID=LTnewLM_050017400.1:CDS:2;Parent=LTnewLM_050017400.1 ### LTnewLM_5 . polypeptide 435748 438499 . - . ID=LTnewLM_050017400.1:pep;Derives_from=LTnewLM_050017400.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 439528 440022 1 - . ID=LTnewLM_050017500 LTnewLM_5 AUGUSTUS mRNA 439528 440022 1 - . ID=LTnewLM_050017500.1;Parent=LTnewLM_050017500 LTnewLM_5 AUGUSTUS CDS 439528 440022 1 - 0 ID=LTnewLM_050017500.1:CDS:1;Parent=LTnewLM_050017500.1 ### LTnewLM_5 . polypeptide 439528 440022 . - . ID=LTnewLM_050017500.1:pep;Derives_from=LTnewLM_050017500.1;product=term%3Dhypothetical protein ### LTnewLM_5 AUGUSTUS gene 440939 441688 1 - . ID=LTnewLM_050017600 LTnewLM_5 AUGUSTUS mRNA 440939 441688 1 - . ID=LTnewLM_050017600.1;Parent=LTnewLM_050017600 LTnewLM_5 AUGUSTUS CDS 440939 441688 1 - 0 ID=LTnewLM_050017600.1:CDS:1;Parent=LTnewLM_050017600.1 ### LTnewLM_5 . polypeptide 440939 441688 . - . ID=LTnewLM_050017600.1:pep;Derives_from=LTnewLM_050017600.1;orthologous_to=LmjF.05.1170_mRNA;ortholog_cluster=OG0006972;product=term%3DGNS1/SUR4 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01151;Ontology_term=GO:0016021 LTnewLM_5 Pfam protein_match 440954 441613 . - . Parent=LTnewLM_050017600.1:pep;Name=PF01151;signature_desc=GNS1/SUR4 family;Ontology_term=GO:0016021 ### LTnewLM_5 AUGUSTUS gene 442247 443818 1 - . ID=LTnewLM_050017700 LTnewLM_5 AUGUSTUS mRNA 442247 443818 1 - . ID=LTnewLM_050017700.1;Parent=LTnewLM_050017700 LTnewLM_5 AUGUSTUS CDS 442247 443818 1 - 0 ID=LTnewLM_050017700.1:CDS:1;Parent=LTnewLM_050017700.1 ### LTnewLM_5 . polypeptide 442247 443818 . - . ID=LTnewLM_050017700.1:pep;Derives_from=LTnewLM_050017700.1;orthologous_to=LmjF.05.1180_mRNA;ortholog_cluster=OG0006973;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 445627 451479 1 - . ID=LTnewLM_050017800 LTnewLM_5 AUGUSTUS mRNA 445627 451479 1 - . ID=LTnewLM_050017800.1;Parent=LTnewLM_050017800 LTnewLM_5 AUGUSTUS CDS 445627 451479 1 - 0 ID=LTnewLM_050017800.1:CDS:1;Parent=LTnewLM_050017800.1 ### LTnewLM_5 . polypeptide 445627 451479 . - . ID=LTnewLM_050017800.1:pep;Derives_from=LTnewLM_050017800.1;orthologous_to=LmjF.05.1190_mRNA;ortholog_cluster=OG0006974;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 AUGUSTUS gene 451866 452264 1 - . ID=LTnewLM_050017900 LTnewLM_5 AUGUSTUS mRNA 451866 452264 1 - . ID=LTnewLM_050017900.1;Parent=LTnewLM_050017900 LTnewLM_5 AUGUSTUS CDS 451866 452264 1 - 0 ID=LTnewLM_050017900.1:CDS:1;Parent=LTnewLM_050017900.1 ### LTnewLM_5 . polypeptide 451866 452264 . - . ID=LTnewLM_050017900.1:pep;Derives_from=LTnewLM_050017900.1;orthologous_to=LmjF.05.1200_mRNA;ortholog_cluster=OG0006975;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01920;Ontology_term=GO:0051082,GO:0006457,GO:0016272 LTnewLM_5 Pfam protein_match 451911 452210 . - . Parent=LTnewLM_050017900.1:pep;Name=PF01920;signature_desc=Prefoldin subunit;Ontology_term=GO:0051082,GO:0006457,GO:0016272 ### LTnewLM_5 AUGUSTUS gene 453256 454446 1 - . ID=LTnewLM_050018000 LTnewLM_5 AUGUSTUS mRNA 453256 454446 1 - . ID=LTnewLM_050018000.1;Parent=LTnewLM_050018000 LTnewLM_5 AUGUSTUS CDS 453256 454446 1 - 0 ID=LTnewLM_050018000.1:CDS:1;Parent=LTnewLM_050018000.1 ### LTnewLM_5 . polypeptide 453256 454446 . - . ID=LTnewLM_050018000.1:pep;Derives_from=LTnewLM_050018000.1;orthologous_to=LmjF.05.1210_mRNA;ortholog_cluster=OG0006976;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_5 Pfam protein_match 453544 453720 . - . Parent=LTnewLM_050018000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 LTnewLM_5 Pfam protein_match 453685 453855 . - . Parent=LTnewLM_050018000.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_5 AUGUSTUS gene 456841 457695 1 + . ID=LTnewLM_050018100 LTnewLM_5 AUGUSTUS mRNA 456841 457695 1 + . ID=LTnewLM_050018100.1;Parent=LTnewLM_050018100 LTnewLM_5 AUGUSTUS CDS 456841 457695 1 + 0 ID=LTnewLM_050018100.1:CDS:1;Parent=LTnewLM_050018100.1 ### LTnewLM_5 . polypeptide 456841 457695 . + . ID=LTnewLM_050018100.1:pep;Derives_from=LTnewLM_050018100.1;orthologous_to=LmjF.05.1215_mRNA;ortholog_cluster=OG0006977;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_5 GenomeTools gene 463450 463522 49.8 + . ID=LTnewLM_050018200 LTnewLM_5 INFERNAL snoRNA 463450 463522 49.8 + . ID=LTnewLM_050018200:snoRNA;Parent=LTnewLM_050018200;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 463621 463709 106 + . ID=LTnewLM_050018300 LTnewLM_5 INFERNAL snoRNA 463621 463709 106 + . ID=LTnewLM_050018300:snoRNA;Parent=LTnewLM_050018300;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 463806 464091 83.3 + . ID=LTnewLM_050018400 LTnewLM_5 INFERNAL snoRNA 463806 464091 83.3 + . ID=LTnewLM_050018400:snoRNA;Parent=LTnewLM_050018400;gc=0.71;evalue=3.3e-23;score=83.3;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 464908 464980 49.8 + . ID=LTnewLM_050018500 LTnewLM_5 INFERNAL snoRNA 464908 464980 49.8 + . ID=LTnewLM_050018500:snoRNA;Parent=LTnewLM_050018500;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 465079 465167 106 + . ID=LTnewLM_050018600 LTnewLM_5 INFERNAL snoRNA 465079 465167 106 + . ID=LTnewLM_050018600:snoRNA;Parent=LTnewLM_050018600;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 465264 465549 84.6 + . ID=LTnewLM_050018700 LTnewLM_5 INFERNAL snoRNA 465264 465549 84.6 + . ID=LTnewLM_050018700:snoRNA;Parent=LTnewLM_050018700;gc=0.71;evalue=1.3e-23;score=84.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 466366 466438 49.8 + . ID=LTnewLM_050018800 LTnewLM_5 INFERNAL snoRNA 466366 466438 49.8 + . ID=LTnewLM_050018800:snoRNA;Parent=LTnewLM_050018800;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 466537 466625 106 + . ID=LTnewLM_050018900 LTnewLM_5 INFERNAL snoRNA 466537 466625 106 + . ID=LTnewLM_050018900:snoRNA;Parent=LTnewLM_050018900;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 466722 467006 87 + . ID=LTnewLM_050019000 LTnewLM_5 INFERNAL snoRNA 466722 467006 87 + . ID=LTnewLM_050019000:snoRNA;Parent=LTnewLM_050019000;gc=0.71;evalue=2.1e-24;score=87.0;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 467820 467892 49.8 + . ID=LTnewLM_050019100 LTnewLM_5 INFERNAL snoRNA 467820 467892 49.8 + . ID=LTnewLM_050019100:snoRNA;Parent=LTnewLM_050019100;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 467991 468079 106 + . ID=LTnewLM_050019200 LTnewLM_5 INFERNAL snoRNA 467991 468079 106 + . ID=LTnewLM_050019200:snoRNA;Parent=LTnewLM_050019200;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 468176 468461 83.3 + . ID=LTnewLM_050019300 LTnewLM_5 INFERNAL snoRNA 468176 468461 83.3 + . ID=LTnewLM_050019300:snoRNA;Parent=LTnewLM_050019300;gc=0.71;evalue=3.3e-23;score=83.3;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 469277 469349 49.8 + . ID=LTnewLM_050019400 LTnewLM_5 INFERNAL snoRNA 469277 469349 49.8 + . ID=LTnewLM_050019400:snoRNA;Parent=LTnewLM_050019400;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 469448 469536 106 + . ID=LTnewLM_050019500 LTnewLM_5 INFERNAL snoRNA 469448 469536 106 + . ID=LTnewLM_050019500:snoRNA;Parent=LTnewLM_050019500;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 469633 469918 83.3 + . ID=LTnewLM_050019600 LTnewLM_5 INFERNAL snoRNA 469633 469918 83.3 + . ID=LTnewLM_050019600:snoRNA;Parent=LTnewLM_050019600;gc=0.71;evalue=3.3e-23;score=83.3;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 470740 470812 49.8 + . ID=LTnewLM_050019700 LTnewLM_5 INFERNAL snoRNA 470740 470812 49.8 + . ID=LTnewLM_050019700:snoRNA;Parent=LTnewLM_050019700;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 470911 470999 106 + . ID=LTnewLM_050019800 LTnewLM_5 INFERNAL snoRNA 470911 470999 106 + . ID=LTnewLM_050019800:snoRNA;Parent=LTnewLM_050019800;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 471096 471381 83.6 + . ID=LTnewLM_050019900 LTnewLM_5 INFERNAL snoRNA 471096 471381 83.6 + . ID=LTnewLM_050019900:snoRNA;Parent=LTnewLM_050019900;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 472198 472270 49.8 + . ID=LTnewLM_050020000 LTnewLM_5 INFERNAL snoRNA 472198 472270 49.8 + . ID=LTnewLM_050020000:snoRNA;Parent=LTnewLM_050020000;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 472369 472457 106 + . ID=LTnewLM_050020100 LTnewLM_5 INFERNAL snoRNA 472369 472457 106 + . ID=LTnewLM_050020100:snoRNA;Parent=LTnewLM_050020100;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 472554 472838 85.6 + . ID=LTnewLM_050020200 LTnewLM_5 INFERNAL snoRNA 472554 472838 85.6 + . ID=LTnewLM_050020200:snoRNA;Parent=LTnewLM_050020200;gc=0.71;evalue=6.1e-24;score=85.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 473653 473725 49.8 + . ID=LTnewLM_050020300 LTnewLM_5 INFERNAL snoRNA 473653 473725 49.8 + . ID=LTnewLM_050020300:snoRNA;Parent=LTnewLM_050020300;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 473824 473912 106 + . ID=LTnewLM_050020400 LTnewLM_5 INFERNAL snoRNA 473824 473912 106 + . ID=LTnewLM_050020400:snoRNA;Parent=LTnewLM_050020400;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 474009 474294 83.6 + . ID=LTnewLM_050020500 LTnewLM_5 INFERNAL snoRNA 474009 474294 83.6 + . ID=LTnewLM_050020500:snoRNA;Parent=LTnewLM_050020500;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 475110 475182 49.8 + . ID=LTnewLM_050020600 LTnewLM_5 INFERNAL snoRNA 475110 475182 49.8 + . ID=LTnewLM_050020600:snoRNA;Parent=LTnewLM_050020600;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 475281 475369 106 + . ID=LTnewLM_050020700 LTnewLM_5 INFERNAL snoRNA 475281 475369 106 + . ID=LTnewLM_050020700:snoRNA;Parent=LTnewLM_050020700;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 475466 475752 82.6 + . ID=LTnewLM_050020800 LTnewLM_5 INFERNAL snoRNA 475466 475752 82.6 + . ID=LTnewLM_050020800:snoRNA;Parent=LTnewLM_050020800;gc=0.71;evalue=5.3e-23;score=82.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 476570 476642 49.8 + . ID=LTnewLM_050020900 LTnewLM_5 INFERNAL snoRNA 476570 476642 49.8 + . ID=LTnewLM_050020900:snoRNA;Parent=LTnewLM_050020900;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 476741 476829 106 + . ID=LTnewLM_050021000 LTnewLM_5 INFERNAL snoRNA 476741 476829 106 + . ID=LTnewLM_050021000:snoRNA;Parent=LTnewLM_050021000;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 476926 477211 83.6 + . ID=LTnewLM_050021100 LTnewLM_5 INFERNAL snoRNA 476926 477211 83.6 + . ID=LTnewLM_050021100:snoRNA;Parent=LTnewLM_050021100;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 478033 478105 49.8 + . ID=LTnewLM_050021200 LTnewLM_5 INFERNAL snoRNA 478033 478105 49.8 + . ID=LTnewLM_050021200:snoRNA;Parent=LTnewLM_050021200;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 478204 478292 106 + . ID=LTnewLM_050021300 LTnewLM_5 INFERNAL snoRNA 478204 478292 106 + . ID=LTnewLM_050021300:snoRNA;Parent=LTnewLM_050021300;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 478389 478674 83.6 + . ID=LTnewLM_050021400 LTnewLM_5 INFERNAL snoRNA 478389 478674 83.6 + . ID=LTnewLM_050021400:snoRNA;Parent=LTnewLM_050021400;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 479495 479567 49.8 + . ID=LTnewLM_050021500 LTnewLM_5 INFERNAL snoRNA 479495 479567 49.8 + . ID=LTnewLM_050021500:snoRNA;Parent=LTnewLM_050021500;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 479666 479754 106 + . ID=LTnewLM_050021600 LTnewLM_5 INFERNAL snoRNA 479666 479754 106 + . ID=LTnewLM_050021600:snoRNA;Parent=LTnewLM_050021600;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 479851 480136 83.6 + . ID=LTnewLM_050021700 LTnewLM_5 INFERNAL snoRNA 479851 480136 83.6 + . ID=LTnewLM_050021700:snoRNA;Parent=LTnewLM_050021700;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 480957 481029 49.8 + . ID=LTnewLM_050021800 LTnewLM_5 INFERNAL snoRNA 480957 481029 49.8 + . ID=LTnewLM_050021800:snoRNA;Parent=LTnewLM_050021800;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 481128 481216 106 + . ID=LTnewLM_050021900 LTnewLM_5 INFERNAL snoRNA 481128 481216 106 + . ID=LTnewLM_050021900:snoRNA;Parent=LTnewLM_050021900;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_5 GenomeTools gene 481313 481598 83.6 + . ID=LTnewLM_050022000 LTnewLM_5 INFERNAL snoRNA 481313 481598 83.6 + . ID=LTnewLM_050022000:snoRNA;Parent=LTnewLM_050022000;gc=0.71;evalue=2.5e-23;score=83.6;model_name=snoTBR17;model_acc=RF00294;model_range=1-288 ### LTnewLM_5 GenomeTools gene 482416 482488 49.8 + . ID=LTnewLM_050022100 LTnewLM_5 INFERNAL snoRNA 482416 482488 49.8 + . ID=LTnewLM_050022100:snoRNA;Parent=LTnewLM_050022100;gc=0.48;evalue=4.6e-08;score=49.8;model_name=snoTBR7;model_acc=RF00295;model_range=1-75 ### LTnewLM_5 GenomeTools gene 482587 482675 106 + . ID=LTnewLM_050022200 LTnewLM_5 INFERNAL snoRNA 482587 482675 106 + . ID=LTnewLM_050022200:snoRNA;Parent=LTnewLM_050022200;gc=0.58;evalue=5.2e-28;score=106.3;model_name=snoTBR5;model_acc=RF00292;model_range=1-96 ### LTnewLM_6 AUGUSTUS gene 1 403 0.7 + . ID=LTnewLM_060005000;fiveEndPartial=true;Start_range=.,. LTnewLM_6 AUGUSTUS mRNA 1 403 0.7 + . ID=LTnewLM_060005000.1;Parent=LTnewLM_060005000 LTnewLM_6 AUGUSTUS CDS 49 403 0.7 + 1 ID=LTnewLM_060005000.1:CDS:1;Parent=LTnewLM_060005000.1 ### LTnewLM_6 . contig 1 519251 . + . Name=LTnewLM_CTG000040 LTnewLM_6 . polypeptide 49 403 . + . ID=LTnewLM_060005000.1:pep;Derives_from=LTnewLM_060005000.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 4847 5149 1 - . ID=LTnewLM_060005100 LTnewLM_6 AUGUSTUS mRNA 4847 5149 1 - . ID=LTnewLM_060005100.1;Parent=LTnewLM_060005100 LTnewLM_6 AUGUSTUS CDS 4847 5149 1 - 0 ID=LTnewLM_060005100.1:CDS:1;Parent=LTnewLM_060005100.1 ### LTnewLM_6 . polypeptide 4847 5149 . - . ID=LTnewLM_060005100.1:pep;Derives_from=LTnewLM_060005100.1;orthologous_to=LTnewLM_150005000.1,LmjF.06.0010_mRNA;ortholog_cluster=OG0000337;product=term%3DTATA box binding protein associated factor (TAF)/Histone-like transcription factor (CBF/NF-Y) and archaeal histone%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02969|Pfam:PF00808;Ontology_term=GO:0043565,GO:0005622,GO:0006352,GO:0005634 LTnewLM_6 Pfam protein_match 4883 5068 . - . Parent=LTnewLM_060005100.1:pep;Name=PF02969;signature_desc=TATA box binding protein associated factor (TAF);Ontology_term=GO:0006352,GO:0005634 LTnewLM_6 Pfam protein_match 4886 5053 . - . Parent=LTnewLM_060005100.1:pep;Name=PF00808;signature_desc=Histone-like transcription factor (CBF/NF-Y) and archaeal histone;Ontology_term=GO:0043565,GO:0005622 ### LTnewLM_6 AUGUSTUS gene 7330 8937 1 - . ID=LTnewLM_060005200 LTnewLM_6 AUGUSTUS mRNA 7330 8937 1 - . ID=LTnewLM_060005200.1;Parent=LTnewLM_060005200 LTnewLM_6 AUGUSTUS CDS 7330 8937 1 - 0 ID=LTnewLM_060005200.1:CDS:1;Parent=LTnewLM_060005200.1 ### LTnewLM_6 . polypeptide 7330 8937 . - . ID=LTnewLM_060005200.1:pep;Derives_from=LTnewLM_060005200.1;orthologous_to=LmjF.06.0020_mRNA;ortholog_cluster=OG0006978;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 14627 16656 . - . ID=LTnewLM_060005300:pseudogene;coverage=1.0;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0030_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 14627 16656 . - . ID=LTnewLM_060005300.1;Parent=LTnewLM_060005300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 14627 16656 . - . ID=LTnewLM_060005300.1:pseudogenic_exon:1;Parent=LTnewLM_060005300.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 14627 16656 . - . ID=LTnewLM_060005300.1:pep;Derives_from=LTnewLM_060005300.1;orthologous_to=LmjF.06.0030_mRNA;ortholog_cluster=OG0007713;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 17516 18391 1 - . ID=LTnewLM_060005400 LTnewLM_6 AUGUSTUS mRNA 17516 18391 1 - . ID=LTnewLM_060005400.1;Parent=LTnewLM_060005400 LTnewLM_6 AUGUSTUS CDS 17516 18391 1 - 0 ID=LTnewLM_060005400.1:CDS:1;Parent=LTnewLM_060005400.1 ### LTnewLM_6 . polypeptide 17516 18391 . - . ID=LTnewLM_060005400.1:pep;Derives_from=LTnewLM_060005400.1;orthologous_to=LmjF.06.0040_mRNA;ortholog_cluster=OG0006979;product=term%3D39S mitochondrial ribosomal protein L46%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11788 LTnewLM_6 Pfam protein_match 17963 18253 . - . Parent=LTnewLM_060005400.1:pep;Name=PF11788;signature_desc=39S mitochondrial ribosomal protein L46 ### LTnewLM_6 AUGUSTUS gene 23913 25358 1 - . ID=LTnewLM_060005500 LTnewLM_6 AUGUSTUS mRNA 23913 25358 1 - . ID=LTnewLM_060005500.1;Parent=LTnewLM_060005500 LTnewLM_6 AUGUSTUS CDS 23913 25358 1 - 0 ID=LTnewLM_060005500.1:CDS:1;Parent=LTnewLM_060005500.1 ### LTnewLM_6 . polypeptide 23913 25358 . - . ID=LTnewLM_060005500.1:pep;Derives_from=LTnewLM_060005500.1;orthologous_to=LmjF.06.0050_mRNA;ortholog_cluster=OG0006980;product=term%3DPumilio-family RNA binding repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00806;Ontology_term=GO:0003723 LTnewLM_6 Pfam protein_match 24090 24131 . - . Parent=LTnewLM_060005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_6 Pfam protein_match 24159 24260 . - . Parent=LTnewLM_060005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_6 Pfam protein_match 24309 24362 . - . Parent=LTnewLM_060005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_6 Pfam protein_match 24381 24476 . - . Parent=LTnewLM_060005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 LTnewLM_6 Pfam protein_match 24612 24689 . - . Parent=LTnewLM_060005500.1:pep;Name=PF00806;signature_desc=Pumilio-family RNA binding repeat;Ontology_term=GO:0003723 ### LTnewLM_6 AUGUSTUS gene 29575 30543 1 - . ID=LTnewLM_060005600 LTnewLM_6 AUGUSTUS mRNA 29575 30543 1 - . ID=LTnewLM_060005600.1;Parent=LTnewLM_060005600 LTnewLM_6 AUGUSTUS CDS 29575 30543 1 - 0 ID=LTnewLM_060005600.1:CDS:1;Parent=LTnewLM_060005600.1 ### LTnewLM_6 . polypeptide 29575 30543 . - . ID=LTnewLM_060005600.1:pep;Derives_from=LTnewLM_060005600.1;orthologous_to=LmjF.06.0060_mRNA;ortholog_cluster=OG0006981;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . polypeptide 32156 32566 . - . ID=LTnewLM_060005700.1:pep;Derives_from=LTnewLM_060005700.1;orthologous_to=LTnewLM_060005700.2,LTnewLM_060005700.3,LmjF.06.0070_mRNA;ortholog_cluster=OG0000269;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 32156 33522 2.32 - . ID=LTnewLM_060005700 LTnewLM_6 AUGUSTUS mRNA 32156 32566 0.68 - . ID=LTnewLM_060005700.1;Parent=LTnewLM_060005700 LTnewLM_6 AUGUSTUS CDS 32156 32566 0.68 - 0 ID=LTnewLM_060005700.1:CDS:1;Parent=LTnewLM_060005700.1 LTnewLM_6 AUGUSTUS mRNA 32156 33522 0.65 - . ID=LTnewLM_060005700.2;Parent=LTnewLM_060005700 LTnewLM_6 AUGUSTUS CDS 32156 32625 0.82 - 2 ID=LTnewLM_060005700.2:CDS:1;Parent=LTnewLM_060005700.2 LTnewLM_6 AUGUSTUS CDS 32760 33522 0.67 - 0 ID=LTnewLM_060005700.2:CDS:2;Parent=LTnewLM_060005700.2 LTnewLM_6 AUGUSTUS mRNA 32704 33522 0.99 - . ID=LTnewLM_060005700.3;Parent=LTnewLM_060005700 LTnewLM_6 AUGUSTUS CDS 32704 33522 0.99 - 0 ID=LTnewLM_060005700.3:CDS:1;Parent=LTnewLM_060005700.3 ### LTnewLM_6 . polypeptide 32156 33522 . - . ID=LTnewLM_060005700.2:pep;Derives_from=LTnewLM_060005700.2;orthologous_to=LTnewLM_060005700.1,LTnewLM_060005700.3,LmjF.06.0070_mRNA;ortholog_cluster=OG0000269;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . polypeptide 32704 33522 . - . ID=LTnewLM_060005700.3:pep;Derives_from=LTnewLM_060005700.3;orthologous_to=LTnewLM_060005700.1,LTnewLM_060005700.2,LmjF.06.0070_mRNA;ortholog_cluster=OG0000269;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 37284 39258 0.47 - . ID=LTnewLM_060005800 LTnewLM_6 AUGUSTUS mRNA 37284 39258 0.47 - . ID=LTnewLM_060005800.1;Parent=LTnewLM_060005800 LTnewLM_6 AUGUSTUS CDS 37284 37836 0.88 - 1 ID=LTnewLM_060005800.1:CDS:1;Parent=LTnewLM_060005800.1 LTnewLM_6 AUGUSTUS CDS 37898 39258 0.47 - 0 ID=LTnewLM_060005800.1:CDS:2;Parent=LTnewLM_060005800.1 ### LTnewLM_6 . polypeptide 37284 39258 . - . ID=LTnewLM_060005800.1:pep;Derives_from=LTnewLM_060005800.1;orthologous_to=LTnewLM_060005900.1,LmjF.06.0080_mRNA,LmjF.06.0090_mRNA;ortholog_cluster=OG0000270;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF19055|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_6 Pfam protein_match 37570 37899 . - . Parent=LTnewLM_060005800.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 LTnewLM_6 Pfam protein_match 37894 38136 . - . Parent=LTnewLM_060005800.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 LTnewLM_6 Pfam protein_match 38290 38475 . - . Parent=LTnewLM_060005800.1:pep;Name=PF19055;signature_desc=ABC-2 type transporter LTnewLM_6 Pfam protein_match 38563 39003 . - . Parent=LTnewLM_060005800.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_6 AUGUSTUS gene 42902 44894 0.72 - . ID=LTnewLM_060005900 LTnewLM_6 AUGUSTUS mRNA 42902 44894 0.72 - . ID=LTnewLM_060005900.1;Parent=LTnewLM_060005900 LTnewLM_6 AUGUSTUS CDS 42902 44251 0.72 - 0 ID=LTnewLM_060005900.1:CDS:1;Parent=LTnewLM_060005900.1 LTnewLM_6 AUGUSTUS CDS 44295 44894 0.79 - 0 ID=LTnewLM_060005900.1:CDS:2;Parent=LTnewLM_060005900.1 ### LTnewLM_6 . polypeptide 42902 44894 . - . ID=LTnewLM_060005900.1:pep;Derives_from=LTnewLM_060005900.1;orthologous_to=LTnewLM_060005800.1,LmjF.06.0080_mRNA,LmjF.06.0090_mRNA;ortholog_cluster=OG0000270;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF19055|Pfam:PF01061;Ontology_term=GO:0016887,GO:0016020,GO:0005524 LTnewLM_6 Pfam protein_match 43173 43799 . - . Parent=LTnewLM_060005900.1:pep;Name=PF01061;signature_desc=ABC-2 type transporter;Ontology_term=GO:0016020 LTnewLM_6 Pfam protein_match 43953 44138 . - . Parent=LTnewLM_060005900.1:pep;Name=PF19055;signature_desc=ABC-2 type transporter LTnewLM_6 Pfam protein_match 44226 44624 . - . Parent=LTnewLM_060005900.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_6 AUGUSTUS gene 46046 47518 0.67 - . ID=LTnewLM_060006000 LTnewLM_6 AUGUSTUS mRNA 46046 47518 0.67 - . ID=LTnewLM_060006000.1;Parent=LTnewLM_060006000 LTnewLM_6 AUGUSTUS CDS 46046 47395 0.96 - 0 ID=LTnewLM_060006000.1:CDS:1;Parent=LTnewLM_060006000.1 LTnewLM_6 AUGUSTUS CDS 47492 47518 0.67 - 0 ID=LTnewLM_060006000.1:CDS:2;Parent=LTnewLM_060006000.1 ### LTnewLM_6 . polypeptide 46046 47518 . - . ID=LTnewLM_060006000.1:pep;Derives_from=LTnewLM_060006000.1;orthologous_to=LmjF.06.0100_mRNA;ortholog_cluster=OG0006982;product=term%3DABC transporter/ABC-2 type transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005|Pfam:PF19055;Ontology_term=GO:0016887,GO:0005524 LTnewLM_6 Pfam protein_match 46676 46864 . - . Parent=LTnewLM_060006000.1:pep;Name=PF19055;signature_desc=ABC-2 type transporter LTnewLM_6 Pfam protein_match 46952 47392 . - . Parent=LTnewLM_060006000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_6 AUGUSTUS gene 48742 50550 1 - . ID=LTnewLM_060006100 LTnewLM_6 AUGUSTUS mRNA 48742 50550 1 - . ID=LTnewLM_060006100.1;Parent=LTnewLM_060006100 LTnewLM_6 AUGUSTUS CDS 48742 50550 1 - 0 ID=LTnewLM_060006100.1:CDS:1;Parent=LTnewLM_060006100.1 ### LTnewLM_6 . polypeptide 48742 50550 . - . ID=LTnewLM_060006100.1:pep;Derives_from=LTnewLM_060006100.1;orthologous_to=LmjF.06.0110_mRNA;ortholog_cluster=OG0006983;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 Liftoff gene 51935 52588 . - . ID=LTnewLM_060006200;coverage=1.0;sequence_ID=0.961;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.06.0120_0 LTnewLM_6 Liftoff mRNA 51935 52588 . - . ID=LTnewLM_060006200.1;Parent=LTnewLM_060006200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 51935 52588 . - 0 ID=LTnewLM_060006200.1:CDS:1;Parent=LTnewLM_060006200.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 51935 52588 . - . ID=LTnewLM_060006200.1:pep;Derives_from=LTnewLM_060006200.1;orthologous_to=LmjF.06.0120_mRNA;ortholog_cluster=OG0006984;product=term%3DCyclophilin type peptidyl-prolyl cis-trans isomerase/CLD%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00160;Ontology_term=GO:0000413,GO:0003755,GO:0006457 LTnewLM_6 Pfam protein_match 51953 52402 . - . Parent=LTnewLM_060006200.1:pep;Name=PF00160;signature_desc=Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;Ontology_term=GO:0003755,GO:0000413,GO:0006457 ### LTnewLM_6 AUGUSTUS gene 53444 54004 1 - . ID=LTnewLM_060006300 LTnewLM_6 AUGUSTUS mRNA 53444 54004 1 - . ID=LTnewLM_060006300.1;Parent=LTnewLM_060006300 LTnewLM_6 AUGUSTUS CDS 53444 54004 1 - 0 ID=LTnewLM_060006300.1:CDS:1;Parent=LTnewLM_060006300.1 ### LTnewLM_6 . polypeptide 53444 54004 . - . ID=LTnewLM_060006300.1:pep;Derives_from=LTnewLM_060006300.1;orthologous_to=LmjF.06.0130_mRNA;ortholog_cluster=OG0006985;product=term%3DNADAR domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08719 LTnewLM_6 Pfam protein_match 53549 53968 . - . Parent=LTnewLM_060006300.1:pep;Name=PF08719;signature_desc=NADAR domain ### LTnewLM_6 AUGUSTUS gene 55524 56267 1 - . ID=LTnewLM_060006400 LTnewLM_6 AUGUSTUS mRNA 55524 56267 1 - . ID=LTnewLM_060006400.1;Parent=LTnewLM_060006400 LTnewLM_6 AUGUSTUS CDS 55524 56267 1 - 0 ID=LTnewLM_060006400.1:CDS:1;Parent=LTnewLM_060006400.1 ### LTnewLM_6 . polypeptide 55524 56267 . - . ID=LTnewLM_060006400.1:pep;Derives_from=LTnewLM_060006400.1;orthologous_to=LmjF.06.0140_mRNA;ortholog_cluster=OG0006986;product=term%3DProteasome subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00227;Ontology_term=GO:0051603,GO:0005839,GO:0004298 LTnewLM_6 Pfam protein_match 55575 56150 . - . Parent=LTnewLM_060006400.1:pep;Name=PF00227;signature_desc=Proteasome subunit;Ontology_term=GO:0004298,GO:0051603,GO:0005839 ### LTnewLM_6 AUGUSTUS gene 57092 57421 1 - . ID=LTnewLM_060006500 LTnewLM_6 AUGUSTUS mRNA 57092 57421 1 - . ID=LTnewLM_060006500.1;Parent=LTnewLM_060006500 LTnewLM_6 AUGUSTUS CDS 57092 57421 1 - 0 ID=LTnewLM_060006500.1:CDS:1;Parent=LTnewLM_060006500.1 ### LTnewLM_6 . polypeptide 57092 57421 . - . ID=LTnewLM_060006500.1:pep;Derives_from=LTnewLM_060006500.1;orthologous_to=LmjF.06.0150_mRNA;ortholog_cluster=OG0006987;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 Liftoff gene 58035 59426 . - . ID=LTnewLM_060006600;coverage=0.991;sequence_ID=0.962;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0160_0 LTnewLM_6 Liftoff mRNA 58035 59426 . - . ID=LTnewLM_060006600.1;Parent=LTnewLM_060006600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 58035 59426 . - 0 ID=LTnewLM_060006600.1:CDS:1;Parent=LTnewLM_060006600.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 58035 59426 . - . ID=LTnewLM_060006600.1:pep;Derives_from=LTnewLM_060006600.1;orthologous_to=LmjF.06.0160_mRNA;ortholog_cluster=OG0006988;product=term%3DHD domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01966 LTnewLM_6 Pfam protein_match 58854 59228 . - . Parent=LTnewLM_060006600.1:pep;Name=PF01966;signature_desc=HD domain ### LTnewLM_6 AUGUSTUS gene 60746 61171 1 - . ID=LTnewLM_060006700 LTnewLM_6 AUGUSTUS mRNA 60746 61171 1 - . ID=LTnewLM_060006700.1;Parent=LTnewLM_060006700 LTnewLM_6 AUGUSTUS CDS 60746 61171 1 - 0 ID=LTnewLM_060006700.1:CDS:1;Parent=LTnewLM_060006700.1 ### LTnewLM_6 . polypeptide 60746 61171 . - . ID=LTnewLM_060006700.1:pep;Derives_from=LTnewLM_060006700.1;orthologous_to=LmjF.06.0170_mRNA;ortholog_cluster=OG0006989;product=term%3DTrm112p-like protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03966 LTnewLM_6 Pfam protein_match 60782 61165 . - . Parent=LTnewLM_060006700.1:pep;Name=PF03966;signature_desc=Trm112p-like protein ### LTnewLM_6 Liftoff gene 61662 63821 . - . ID=LTnewLM_060006800;coverage=0.986;sequence_ID=0.935;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.06.0180_0 LTnewLM_6 Liftoff mRNA 61662 63821 . - . ID=LTnewLM_060006800.1;Parent=LTnewLM_060006800;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 61662 63821 . - 0 ID=LTnewLM_060006800.1:CDS:1;Parent=LTnewLM_060006800.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 61662 63821 . - . ID=LTnewLM_060006800.1:pep;Derives_from=LTnewLM_060006800.1;orthologous_to=LmjF.06.0180_mRNA;ortholog_cluster=OG0006990;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_6 Pfam protein_match 62211 63356 . - . Parent=LTnewLM_060006800.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_6 Pfam protein_match 63174 63359 . - . Parent=LTnewLM_060006800.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_6 AUGUSTUS gene 65228 67410 0.58 - . ID=LTnewLM_060006900 LTnewLM_6 AUGUSTUS mRNA 65228 67410 0.58 - . ID=LTnewLM_060006900.1;Parent=LTnewLM_060006900 LTnewLM_6 AUGUSTUS CDS 65228 66479 0.76 - 1 ID=LTnewLM_060006900.1:CDS:1;Parent=LTnewLM_060006900.1 LTnewLM_6 AUGUSTUS CDS 66557 67410 0.68 - 0 ID=LTnewLM_060006900.1:CDS:2;Parent=LTnewLM_060006900.1 ### LTnewLM_6 . polypeptide 65228 67410 . - . ID=LTnewLM_060006900.1:pep;Derives_from=LTnewLM_060006900.1;orthologous_to=LmjF.06.0190_mRNA;ortholog_cluster=OG0006991;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 68874 70364 1 - . ID=LTnewLM_060007000 LTnewLM_6 AUGUSTUS mRNA 68874 70364 1 - . ID=LTnewLM_060007000.1;Parent=LTnewLM_060007000 LTnewLM_6 AUGUSTUS CDS 68874 70364 1 - 0 ID=LTnewLM_060007000.1:CDS:1;Parent=LTnewLM_060007000.1 ### LTnewLM_6 . polypeptide 68874 70364 . - . ID=LTnewLM_060007000.1:pep;Derives_from=LTnewLM_060007000.1;orthologous_to=LmjF.06.0200_mRNA;ortholog_cluster=OG0006992;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 71323 71559 1 - . ID=LTnewLM_060007100 LTnewLM_6 AUGUSTUS mRNA 71323 71559 1 - . ID=LTnewLM_060007100.1;Parent=LTnewLM_060007100 LTnewLM_6 AUGUSTUS CDS 71323 71559 1 - 0 ID=LTnewLM_060007100.1:CDS:1;Parent=LTnewLM_060007100.1 ### LTnewLM_6 . polypeptide 71323 71559 . - . ID=LTnewLM_060007100.1:pep;Derives_from=LTnewLM_060007100.1;product=term%3Dhypothetical protein ### LTnewLM_6 Aragorn_1.2.36 gene 71919 72006 . - . ID=LTnewLM_060007200 LTnewLM_6 Aragorn_1.2.36 tRNA 71919 72006 . - . ID=LTnewLM_060007200:tRNA;Parent=LTnewLM_060007200;aa=SeC;anticodon=tca;gc_content=63.6 ### LTnewLM_6 . pseudogene 72915 74933 . - . ID=LTnewLM_060007300:pseudogene;coverage=0.989;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0210_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 72915 74933 . - . ID=LTnewLM_060007300.1;Parent=LTnewLM_060007300:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 72915 74933 . - . ID=LTnewLM_060007300.1:pseudogenic_exon:1;Parent=LTnewLM_060007300.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 72915 74933 . - . ID=LTnewLM_060007300.1:pep;Derives_from=LTnewLM_060007300.1;orthologous_to=LmjF.06.0210_mRNA;ortholog_cluster=OG0007714;product=term%3DFHA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 74424 74780 . - . Parent=LTnewLM_060007300.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 ### LTnewLM_6 AUGUSTUS gene 75798 76658 1 - . ID=LTnewLM_060007400 LTnewLM_6 AUGUSTUS mRNA 75798 76658 1 - . ID=LTnewLM_060007400.1;Parent=LTnewLM_060007400 LTnewLM_6 AUGUSTUS CDS 75798 76658 1 - 0 ID=LTnewLM_060007400.1:CDS:1;Parent=LTnewLM_060007400.1 ### LTnewLM_6 . polypeptide 75798 76658 . - . ID=LTnewLM_060007400.1:pep;Derives_from=LTnewLM_060007400.1;orthologous_to=LmjF.06.0220_mRNA;ortholog_cluster=OG0006993;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 77346 77987 1 - . ID=LTnewLM_060007500 LTnewLM_6 AUGUSTUS mRNA 77346 77987 1 - . ID=LTnewLM_060007500.1;Parent=LTnewLM_060007500 LTnewLM_6 AUGUSTUS CDS 77346 77987 1 - 0 ID=LTnewLM_060007500.1:CDS:1;Parent=LTnewLM_060007500.1 ### LTnewLM_6 . polypeptide 77346 77987 . - . ID=LTnewLM_060007500.1:pep;Derives_from=LTnewLM_060007500.1;orthologous_to=LmjF.06.0230_mRNA;ortholog_cluster=OG0006994;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 79088 82050 . - . ID=LTnewLM_060007600:pseudogene;coverage=0.995;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0240_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 79088 82050 . - . ID=LTnewLM_060007600.1;Parent=LTnewLM_060007600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 79088 82050 . - . ID=LTnewLM_060007600.1:pseudogenic_exon:1;Parent=LTnewLM_060007600.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 79088 82050 . - . ID=LTnewLM_060007600.1:pep;Derives_from=LTnewLM_060007600.1;orthologous_to=LmjF.06.0240_mRNA;ortholog_cluster=OG0007715;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 83522 84358 1 - . ID=LTnewLM_060007700 LTnewLM_6 AUGUSTUS mRNA 83522 84358 1 - . ID=LTnewLM_060007700.1;Parent=LTnewLM_060007700 LTnewLM_6 AUGUSTUS CDS 83522 84358 1 - 0 ID=LTnewLM_060007700.1:CDS:1;Parent=LTnewLM_060007700.1 ### LTnewLM_6 . polypeptide 83522 84358 . - . ID=LTnewLM_060007700.1:pep;Derives_from=LTnewLM_060007700.1;orthologous_to=LmjF.06.0250_mRNA;ortholog_cluster=OG0006995;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 86184 90683 1 - . ID=LTnewLM_060007800 LTnewLM_6 AUGUSTUS mRNA 86184 90683 1 - . ID=LTnewLM_060007800.1;Parent=LTnewLM_060007800 LTnewLM_6 AUGUSTUS CDS 86184 90683 1 - 0 ID=LTnewLM_060007800.1:CDS:1;Parent=LTnewLM_060007800.1 ### LTnewLM_6 . polypeptide 86184 90683 . - . ID=LTnewLM_060007800.1:pep;Derives_from=LTnewLM_060007800.1;orthologous_to=LmjF.06.0260_mRNA;ortholog_cluster=OG0006996;product=term%3DXRN 5'-3' exonuclease N-terminus/Xrn1 helical domain/Exoribonuclease Xrn1 D1 domain/Xrn1 SH3-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03159|Pfam:PF17846|Pfam:PF18332|Pfam:PF18129;Ontology_term=GO:0003676,GO:0004527 LTnewLM_6 Pfam protein_match 87102 87302 . - . Parent=LTnewLM_060007800.1:pep;Name=PF18129;signature_desc=Xrn1 SH3-like domain LTnewLM_6 Pfam protein_match 88251 88826 . - . Parent=LTnewLM_060007800.1:pep;Name=PF18332;signature_desc=Exoribonuclease Xrn1 D1 domain LTnewLM_6 Pfam protein_match 88968 89468 . - . Parent=LTnewLM_060007800.1:pep;Name=PF17846;signature_desc=Xrn1 helical domain LTnewLM_6 Pfam protein_match 89502 89813 . - . Parent=LTnewLM_060007800.1:pep;Name=PF17846;signature_desc=Xrn1 helical domain LTnewLM_6 Pfam protein_match 90006 90683 . - . Parent=LTnewLM_060007800.1:pep;Name=PF03159;signature_desc=XRN 5'-3' exonuclease N-terminus;Ontology_term=GO:0003676,GO:0004527 ### LTnewLM_6 AUGUSTUS gene 92940 93878 1 - . ID=LTnewLM_060007900 LTnewLM_6 AUGUSTUS mRNA 92940 93878 1 - . ID=LTnewLM_060007900.1;Parent=LTnewLM_060007900 LTnewLM_6 AUGUSTUS CDS 92940 93878 1 - 0 ID=LTnewLM_060007900.1:CDS:1;Parent=LTnewLM_060007900.1 ### LTnewLM_6 . polypeptide 92940 93878 . - . ID=LTnewLM_060007900.1:pep;Derives_from=LTnewLM_060007900.1;orthologous_to=LmjF.06.0270_mRNA;ortholog_cluster=OG0006997;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 94584 97157 1 - . ID=LTnewLM_060008000 LTnewLM_6 AUGUSTUS mRNA 94584 97157 1 - . ID=LTnewLM_060008000.1;Parent=LTnewLM_060008000 LTnewLM_6 AUGUSTUS CDS 94584 97157 1 - 0 ID=LTnewLM_060008000.1:CDS:1;Parent=LTnewLM_060008000.1 ### LTnewLM_6 . polypeptide 94584 97157 . - . ID=LTnewLM_060008000.1:pep;Derives_from=LTnewLM_060008000.1;orthologous_to=LmjF.06.0280_mRNA;ortholog_cluster=OG0006998;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 97891 98571 1 - . ID=LTnewLM_060008100 LTnewLM_6 AUGUSTUS mRNA 97891 98571 1 - . ID=LTnewLM_060008100.1;Parent=LTnewLM_060008100 LTnewLM_6 AUGUSTUS CDS 97891 98571 1 - 0 ID=LTnewLM_060008100.1:CDS:1;Parent=LTnewLM_060008100.1 ### LTnewLM_6 . polypeptide 97891 98571 . - . ID=LTnewLM_060008100.1:pep;Derives_from=LTnewLM_060008100.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 99272 100417 1 - . ID=LTnewLM_060008200 LTnewLM_6 AUGUSTUS mRNA 99272 100417 1 - . ID=LTnewLM_060008200.1;Parent=LTnewLM_060008200 LTnewLM_6 AUGUSTUS CDS 99272 100417 1 - 0 ID=LTnewLM_060008200.1:CDS:1;Parent=LTnewLM_060008200.1 ### LTnewLM_6 . polypeptide 99272 100417 . - . ID=LTnewLM_060008200.1:pep;Derives_from=LTnewLM_060008200.1;orthologous_to=LmjF.06.0290_mRNA;ortholog_cluster=OG0006999;product=term%3DCaulimovirus viroplasmin/RNase H%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01693|Pfam:PF00075;Ontology_term=GO:0003676,GO:0004523 LTnewLM_6 Pfam protein_match 99518 99931 . - . Parent=LTnewLM_060008200.1:pep;Name=PF00075;signature_desc=RNase H;Ontology_term=GO:0003676,GO:0004523 LTnewLM_6 Pfam protein_match 100280 100405 . - . Parent=LTnewLM_060008200.1:pep;Name=PF01693;signature_desc=Caulimovirus viroplasmin ### LTnewLM_6 AUGUSTUS gene 102073 102582 1 - . ID=LTnewLM_060008300 LTnewLM_6 AUGUSTUS mRNA 102073 102582 1 - . ID=LTnewLM_060008300.1;Parent=LTnewLM_060008300 LTnewLM_6 AUGUSTUS CDS 102073 102582 1 - 0 ID=LTnewLM_060008300.1:CDS:1;Parent=LTnewLM_060008300.1 ### LTnewLM_6 . polypeptide 102073 102582 . - . ID=LTnewLM_060008300.1:pep;Derives_from=LTnewLM_060008300.1;orthologous_to=LmjF.06.0300_mRNA;ortholog_cluster=OG0007000;product=term%3DMYND finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01753 LTnewLM_6 Pfam protein_match 102088 102222 . - . Parent=LTnewLM_060008300.1:pep;Name=PF01753;signature_desc=MYND finger ### LTnewLM_6 AUGUSTUS gene 106393 108426 1 - . ID=LTnewLM_060008400 LTnewLM_6 AUGUSTUS mRNA 106393 108426 1 - . ID=LTnewLM_060008400.1;Parent=LTnewLM_060008400 LTnewLM_6 AUGUSTUS CDS 106393 108426 1 - 0 ID=LTnewLM_060008400.1:CDS:1;Parent=LTnewLM_060008400.1 ### LTnewLM_6 . polypeptide 106393 108426 . - . ID=LTnewLM_060008400.1:pep;Derives_from=LTnewLM_060008400.1;orthologous_to=LmjF.06.0310_mRNA;ortholog_cluster=OG0007001;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_6 Pfam protein_match 106462 108150 . - . Parent=LTnewLM_060008400.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_6 AUGUSTUS gene 109324 112398 1 - . ID=LTnewLM_060008500 LTnewLM_6 AUGUSTUS mRNA 109324 112398 1 - . ID=LTnewLM_060008500.1;Parent=LTnewLM_060008500 LTnewLM_6 AUGUSTUS CDS 109324 112398 1 - 0 ID=LTnewLM_060008500.1:CDS:1;Parent=LTnewLM_060008500.1 ### LTnewLM_6 . polypeptide 109324 112398 . - . ID=LTnewLM_060008500.1:pep;Derives_from=LTnewLM_060008500.1;orthologous_to=LmjF.06.0320_mRNA;ortholog_cluster=OG0007002;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 113832 117386 1 - . ID=LTnewLM_060008600 LTnewLM_6 AUGUSTUS mRNA 113832 117386 1 - . ID=LTnewLM_060008600.1;Parent=LTnewLM_060008600 LTnewLM_6 AUGUSTUS CDS 113832 117386 1 - 0 ID=LTnewLM_060008600.1:CDS:1;Parent=LTnewLM_060008600.1 ### LTnewLM_6 . polypeptide 113832 117386 . - . ID=LTnewLM_060008600.1:pep;Derives_from=LTnewLM_060008600.1;orthologous_to=LmjF.06.0330_mRNA;ortholog_cluster=OG0007003;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 118120 120837 1 - . ID=LTnewLM_060008700 LTnewLM_6 AUGUSTUS mRNA 118120 120837 1 - . ID=LTnewLM_060008700.1;Parent=LTnewLM_060008700 LTnewLM_6 AUGUSTUS CDS 118120 120837 1 - 0 ID=LTnewLM_060008700.1:CDS:1;Parent=LTnewLM_060008700.1 ### LTnewLM_6 . polypeptide 118120 120837 . - . ID=LTnewLM_060008700.1:pep;Derives_from=LTnewLM_060008700.1;orthologous_to=LmjF.06.0340_mRNA;ortholog_cluster=OG0007004;product=term%3DProlyl oligopeptidase%2C N-terminal beta-propeller domain/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02897|Pfam:PF00326;Ontology_term=GO:0006508,GO:0004252,GO:0070008,GO:0008236 LTnewLM_6 Pfam protein_match 118540 119136 . - . Parent=LTnewLM_060008700.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 LTnewLM_6 Pfam protein_match 119440 120684 . - . Parent=LTnewLM_060008700.1:pep;Name=PF02897;signature_desc=Prolyl oligopeptidase%2C N-terminal beta-propeller domain;Ontology_term=GO:0004252,GO:0070008 ### LTnewLM_6 AUGUSTUS gene 121591 122814 1 - . ID=LTnewLM_060008800 LTnewLM_6 AUGUSTUS mRNA 121591 122814 1 - . ID=LTnewLM_060008800.1;Parent=LTnewLM_060008800 LTnewLM_6 AUGUSTUS CDS 121591 122814 1 - 0 ID=LTnewLM_060008800.1:CDS:1;Parent=LTnewLM_060008800.1 ### LTnewLM_6 . polypeptide 121591 122814 . - . ID=LTnewLM_060008800.1:pep;Derives_from=LTnewLM_060008800.1;orthologous_to=LmjF.06.0350_mRNA;ortholog_cluster=OG0007005;product=term%3DRmlD substrate binding domain/Polysaccharide biosynthesis protein/NmrA-like family/NAD dependent epimerase/dehydratase family/3-beta hydroxysteroid dehydrogenase/isomerase family/GDP-mannose 4%2C6 dehydratase/NAD(P)H-binding/Male sterility protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04321|Pfam:PF02719|Pfam:PF05368|Pfam:PF01370|Pfam:PF01073|Pfam:PF16363|Pfam:PF13460|Pfam:PF07993;Ontology_term=GO:0003824,GO:0003854,GO:0055114,GO:0050662,GO:0006694,GO:0016616,GO:0009058 LTnewLM_6 Pfam protein_match 121993 122727 . - . Parent=LTnewLM_060008800.1:pep;Name=PF01073;signature_desc=3-beta hydroxysteroid dehydrogenase/isomerase family;Ontology_term=GO:0003854,GO:0016616,GO:0006694,GO:0055114 LTnewLM_6 Pfam protein_match 122005 122733 . - . Parent=LTnewLM_060008800.1:pep;Name=PF04321;signature_desc=RmlD substrate binding domain LTnewLM_6 Pfam protein_match 122065 122724 . - . Parent=LTnewLM_060008800.1:pep;Name=PF16363;signature_desc=GDP-mannose 4%2C6 dehydratase LTnewLM_6 Pfam protein_match 122065 122727 . - . Parent=LTnewLM_060008800.1:pep;Name=PF01370;signature_desc=NAD dependent epimerase/dehydratase family;Ontology_term=GO:0003824,GO:0050662 LTnewLM_6 Pfam protein_match 122239 122559 . - . Parent=LTnewLM_060008800.1:pep;Name=PF07993;signature_desc=Male sterility protein LTnewLM_6 Pfam protein_match 122383 122718 . - . Parent=LTnewLM_060008800.1:pep;Name=PF13460;signature_desc=NAD(P)H-binding LTnewLM_6 Pfam protein_match 122389 122727 . - . Parent=LTnewLM_060008800.1:pep;Name=PF05368;signature_desc=NmrA-like family LTnewLM_6 Pfam protein_match 122398 122727 . - . Parent=LTnewLM_060008800.1:pep;Name=PF02719;signature_desc=Polysaccharide biosynthesis protein;Ontology_term=GO:0009058 ### LTnewLM_6 AUGUSTUS gene 123396 124751 1 - . ID=LTnewLM_060008900 LTnewLM_6 AUGUSTUS mRNA 123396 124751 1 - . ID=LTnewLM_060008900.1;Parent=LTnewLM_060008900 LTnewLM_6 AUGUSTUS CDS 123396 124751 1 - 0 ID=LTnewLM_060008900.1:CDS:1;Parent=LTnewLM_060008900.1 ### LTnewLM_6 . polypeptide 123396 124751 . - . ID=LTnewLM_060008900.1:pep;Derives_from=LTnewLM_060008900.1;orthologous_to=LmjF.06.0360_mRNA;ortholog_cluster=OG0007006;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 127420 129506 0.68 + . ID=LTnewLM_060009000 LTnewLM_6 AUGUSTUS mRNA 127420 129506 0.68 + . ID=LTnewLM_060009000.1;Parent=LTnewLM_060009000 LTnewLM_6 AUGUSTUS CDS 127420 127976 0.75 + 0 ID=LTnewLM_060009000.1:CDS:1;Parent=LTnewLM_060009000.1 LTnewLM_6 AUGUSTUS CDS 129458 129506 0.84 + 1 ID=LTnewLM_060009000.1:CDS:2;Parent=LTnewLM_060009000.1 ### LTnewLM_6 . polypeptide 127420 129506 . + . ID=LTnewLM_060009000.1:pep;Derives_from=LTnewLM_060009000.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 131575 132714 1 + . ID=LTnewLM_060009100 LTnewLM_6 AUGUSTUS mRNA 131575 132714 1 + . ID=LTnewLM_060009100.1;Parent=LTnewLM_060009100 LTnewLM_6 AUGUSTUS CDS 131575 132714 1 + 0 ID=LTnewLM_060009100.1:CDS:1;Parent=LTnewLM_060009100.1 ### LTnewLM_6 . polypeptide 131575 132714 . + . ID=LTnewLM_060009100.1:pep;Derives_from=LTnewLM_060009100.1;orthologous_to=LmjF.06.0370_mRNA;ortholog_cluster=OG0007007;product=term%3DGlutamine synthetase%2C beta-Grasp domain/Glutamine synthetase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03951|Pfam:PF00120;Ontology_term=GO:0004356,GO:0006807,GO:0006542 LTnewLM_6 Pfam protein_match 131602 131880 . + . Parent=LTnewLM_060009100.1:pep;Name=PF03951;signature_desc=Glutamine synthetase%2C beta-Grasp domain;Ontology_term=GO:0004356,GO:0006542,GO:0006807 LTnewLM_6 Pfam protein_match 131953 132639 . + . Parent=LTnewLM_060009100.1:pep;Name=PF00120;signature_desc=Glutamine synthetase%2C catalytic domain;Ontology_term=GO:0004356,GO:0006807 ### LTnewLM_6 AUGUSTUS gene 133606 134730 1 + . ID=LTnewLM_060009200 LTnewLM_6 AUGUSTUS mRNA 133606 134730 1 + . ID=LTnewLM_060009200.1;Parent=LTnewLM_060009200 LTnewLM_6 AUGUSTUS CDS 133606 134730 1 + 0 ID=LTnewLM_060009200.1:CDS:1;Parent=LTnewLM_060009200.1 ### LTnewLM_6 . polypeptide 133606 134730 . + . ID=LTnewLM_060009200.1:pep;Derives_from=LTnewLM_060009200.1;orthologous_to=LmjF.06.0380_mRNA;ortholog_cluster=OG0007008;product=term%3DZinc finger C-x8-C-x5-C-x3-H type (and similar)/CCCH-type zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00642|Pfam:PF18044;Ontology_term=GO:0046872 LTnewLM_6 Pfam protein_match 134347 134412 . + . Parent=LTnewLM_060009200.1:pep;Name=PF00642;signature_desc=Zinc finger C-x8-C-x5-C-x3-H type (and similar);Ontology_term=GO:0046872 LTnewLM_6 Pfam protein_match 134350 134409 . + . Parent=LTnewLM_060009200.1:pep;Name=PF18044;signature_desc=CCCH-type zinc finger ### LTnewLM_6 AUGUSTUS gene 135680 138403 1 + . ID=LTnewLM_060009300 LTnewLM_6 AUGUSTUS mRNA 135680 138403 1 + . ID=LTnewLM_060009300.1;Parent=LTnewLM_060009300 LTnewLM_6 AUGUSTUS CDS 135680 138403 1 + 0 ID=LTnewLM_060009300.1:CDS:1;Parent=LTnewLM_060009300.1 ### LTnewLM_6 . polypeptide 135680 138403 . + . ID=LTnewLM_060009300.1:pep;Derives_from=LTnewLM_060009300.1;orthologous_to=LmjF.06.0390_mRNA;ortholog_cluster=OG0007009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 138737 139654 475 + . ID=LTnewLM_060009400:pseudogene;has_internal_stop=true;has_frameshift=true;has_start=true;Target=LmjF.36.1260:mRNA 1 352;original_prot_length=372 LTnewLM_6 . pseudogenic_transcript 138737 139654 . + . ID=LTnewLM_060009400.1;Parent=LTnewLM_060009400:pseudogene LTnewLM_6 . pseudogenic_exon 138737 138853 . + . ID=LTnewLM_060009400.1:pseudogenic_exon:1;Parent=LTnewLM_060009400.1 LTnewLM_6 . pseudogenic_exon 138855 139127 . + . ID=LTnewLM_060009400.1:pseudogenic_exon:2;Parent=LTnewLM_060009400.1 LTnewLM_6 . pseudogenic_exon 139129 139395 . + . ID=LTnewLM_060009400.1:pseudogenic_exon:3;Parent=LTnewLM_060009400.1 LTnewLM_6 . pseudogenic_exon 139397 139654 . + . ID=LTnewLM_060009400.1:pseudogenic_exon:4;Parent=LTnewLM_060009400.1 ### LTnewLM_6 . polypeptide 138737 139654 . + . ID=LTnewLM_060009400.1:pep;Derives_from=LTnewLM_060009400.1;orthologous_to=LTnewLM_360018800.1,LmjF.36.1260_mRNA;ortholog_cluster=OG0000477;product=term%3DFructose-bisphosphate aldolase class-I%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00274;Ontology_term=GO:0006096,GO:0004332 LTnewLM_6 Pfam protein_match 138830 139312 . + . Parent=LTnewLM_060009400.1:pep;Name=PF00274;signature_desc=Fructose-bisphosphate aldolase class-I;Ontology_term=GO:0004332,GO:0006096 LTnewLM_6 Pfam protein_match 139325 139645 . + . Parent=LTnewLM_060009400.1:pep;Name=PF00274;signature_desc=Fructose-bisphosphate aldolase class-I;Ontology_term=GO:0004332,GO:0006096 ### LTnewLM_6 AUGUSTUS gene 141677 142435 1 + . ID=LTnewLM_060009500 LTnewLM_6 AUGUSTUS mRNA 141677 142435 1 + . ID=LTnewLM_060009500.1;Parent=LTnewLM_060009500 LTnewLM_6 AUGUSTUS CDS 141677 142435 1 + 0 ID=LTnewLM_060009500.1:CDS:1;Parent=LTnewLM_060009500.1 ### LTnewLM_6 . polypeptide 141677 142435 . + . ID=LTnewLM_060009500.1:pep;Derives_from=LTnewLM_060009500.1;orthologous_to=LTnewLM_060009700.1,LmjF.06.0410_mRNA;ortholog_cluster=OG0000490;product=term%3DRibosomal protein L19e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01280;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_6 Pfam protein_match 141686 142108 . + . Parent=LTnewLM_060009500.1:pep;Name=PF01280;signature_desc=Ribosomal protein L19e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_6 AUGUSTUS gene 143755 144324 1 + . ID=LTnewLM_060009600 LTnewLM_6 AUGUSTUS mRNA 143755 144324 1 + . ID=LTnewLM_060009600.1;Parent=LTnewLM_060009600 LTnewLM_6 AUGUSTUS CDS 143755 144324 1 + 0 ID=LTnewLM_060009600.1:CDS:1;Parent=LTnewLM_060009600.1 ### LTnewLM_6 . polypeptide 143755 144324 . + . ID=LTnewLM_060009600.1:pep;Derives_from=LTnewLM_060009600.1;orthologous_to=LmjF.06.0412_mRNA;ortholog_cluster=OG0007010;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 145129 145908 1 + . ID=LTnewLM_060009700 LTnewLM_6 AUGUSTUS mRNA 145129 145908 1 + . ID=LTnewLM_060009700.1;Parent=LTnewLM_060009700 LTnewLM_6 AUGUSTUS CDS 145129 145908 1 + 0 ID=LTnewLM_060009700.1:CDS:1;Parent=LTnewLM_060009700.1 ### LTnewLM_6 . polypeptide 145129 145908 . + . ID=LTnewLM_060009700.1:pep;Derives_from=LTnewLM_060009700.1;orthologous_to=LTnewLM_060009500.1,LmjF.06.0410_mRNA;ortholog_cluster=OG0000490;product=term%3DRibosomal protein L19e%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01280;Ontology_term=GO:0005840,GO:0006412,GO:0003735,GO:0005622 LTnewLM_6 Pfam protein_match 145138 145560 . + . Parent=LTnewLM_060009700.1:pep;Name=PF01280;signature_desc=Ribosomal protein L19e;Ontology_term=GO:0003735,GO:0006412,GO:0005622,GO:0005840 ### LTnewLM_6 AUGUSTUS gene 148003 149721 1 + . ID=LTnewLM_060009800 LTnewLM_6 AUGUSTUS mRNA 148003 149721 1 + . ID=LTnewLM_060009800.1;Parent=LTnewLM_060009800 LTnewLM_6 AUGUSTUS CDS 148003 149721 1 + 0 ID=LTnewLM_060009800.1:CDS:1;Parent=LTnewLM_060009800.1 ### LTnewLM_6 . polypeptide 148003 149721 . + . ID=LTnewLM_060009800.1:pep;Derives_from=LTnewLM_060009800.1;orthologous_to=LmjF.06.0420_mRNA;ortholog_cluster=OG0007011;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 151366 153441 1 + . ID=LTnewLM_060009900 LTnewLM_6 AUGUSTUS mRNA 151366 153441 1 + . ID=LTnewLM_060009900.1;Parent=LTnewLM_060009900 LTnewLM_6 AUGUSTUS CDS 151366 153441 1 + 0 ID=LTnewLM_060009900.1:CDS:1;Parent=LTnewLM_060009900.1 ### LTnewLM_6 . polypeptide 151366 153441 . + . ID=LTnewLM_060009900.1:pep;Derives_from=LTnewLM_060009900.1;orthologous_to=LmjF.06.0430_mRNA;ortholog_cluster=OG0007012;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 154675 157653 1 + . ID=LTnewLM_060010000 LTnewLM_6 AUGUSTUS mRNA 154675 157653 1 + . ID=LTnewLM_060010000.1;Parent=LTnewLM_060010000 LTnewLM_6 AUGUSTUS CDS 154675 157653 1 + 0 ID=LTnewLM_060010000.1:CDS:1;Parent=LTnewLM_060010000.1 ### LTnewLM_6 . polypeptide 154675 157653 . + . ID=LTnewLM_060010000.1:pep;Derives_from=LTnewLM_060010000.1;orthologous_to=LmjF.06.0440_mRNA;ortholog_cluster=OG0007013;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 159573 160946 1 + . ID=LTnewLM_060010100 LTnewLM_6 AUGUSTUS mRNA 159573 160946 1 + . ID=LTnewLM_060010100.1;Parent=LTnewLM_060010100 LTnewLM_6 AUGUSTUS CDS 159573 160946 1 + 0 ID=LTnewLM_060010100.1:CDS:1;Parent=LTnewLM_060010100.1 ### LTnewLM_6 . polypeptide 159573 160946 . + . ID=LTnewLM_060010100.1:pep;Derives_from=LTnewLM_060010100.1;orthologous_to=LmjF.06.0450_mRNA;ortholog_cluster=OG0007014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 163315 167145 1 + . ID=LTnewLM_060010200 LTnewLM_6 AUGUSTUS mRNA 163315 167145 1 + . ID=LTnewLM_060010200.1;Parent=LTnewLM_060010200 LTnewLM_6 AUGUSTUS CDS 163315 167145 1 + 0 ID=LTnewLM_060010200.1:CDS:1;Parent=LTnewLM_060010200.1 ### LTnewLM_6 . polypeptide 163315 167145 . + . ID=LTnewLM_060010200.1:pep;Derives_from=LTnewLM_060010200.1;orthologous_to=LmjF.06.0460_mRNA;ortholog_cluster=OG0007015;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 168436 171906 1 + . ID=LTnewLM_060010300 LTnewLM_6 AUGUSTUS mRNA 168436 171906 1 + . ID=LTnewLM_060010300.1;Parent=LTnewLM_060010300 LTnewLM_6 AUGUSTUS CDS 168436 171906 1 + 0 ID=LTnewLM_060010300.1:CDS:1;Parent=LTnewLM_060010300.1 ### LTnewLM_6 . polypeptide 168436 171906 . + . ID=LTnewLM_060010300.1:pep;Derives_from=LTnewLM_060010300.1;orthologous_to=LmjF.06.0470_mRNA;ortholog_cluster=OG0007016;product=term%3DCondensin complex subunit 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05786;Ontology_term=GO:0000796,GO:0007076 LTnewLM_6 Pfam protein_match 168889 169497 . + . Parent=LTnewLM_060010300.1:pep;Name=PF05786;signature_desc=Condensin complex subunit 2;Ontology_term=GO:0007076,GO:0000796 ### LTnewLM_6 AUGUSTUS gene 172915 173892 1 + . ID=LTnewLM_060010400 LTnewLM_6 AUGUSTUS mRNA 172915 173892 1 + . ID=LTnewLM_060010400.1;Parent=LTnewLM_060010400 LTnewLM_6 AUGUSTUS CDS 172915 173892 1 + 0 ID=LTnewLM_060010400.1:CDS:1;Parent=LTnewLM_060010400.1 ### LTnewLM_6 . polypeptide 172915 173892 . + . ID=LTnewLM_060010400.1:pep;Derives_from=LTnewLM_060010400.1;orthologous_to=LmjF.06.0480_mRNA;ortholog_cluster=OG0007017;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 174702 176507 0.52 + . ID=LTnewLM_060010500 LTnewLM_6 AUGUSTUS mRNA 174702 176507 0.52 + . ID=LTnewLM_060010500.1;Parent=LTnewLM_060010500 LTnewLM_6 AUGUSTUS CDS 174702 176507 0.52 + 0 ID=LTnewLM_060010500.1:CDS:1;Parent=LTnewLM_060010500.1 ### LTnewLM_6 . polypeptide 174702 176507 . + . ID=LTnewLM_060010500.1:pep;Derives_from=LTnewLM_060010500.1;orthologous_to=LmjF.06.0490_mRNA;ortholog_cluster=OG0007018;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 177646 179283 1 + . ID=LTnewLM_060010600 LTnewLM_6 AUGUSTUS mRNA 177646 179283 1 + . ID=LTnewLM_060010600.1;Parent=LTnewLM_060010600 LTnewLM_6 AUGUSTUS CDS 177646 179283 1 + 0 ID=LTnewLM_060010600.1:CDS:1;Parent=LTnewLM_060010600.1 ### LTnewLM_6 . polypeptide 177646 179283 . + . ID=LTnewLM_060010600.1:pep;Derives_from=LTnewLM_060010600.1;orthologous_to=LmjF.06.0500_mRNA;ortholog_cluster=OG0007019;product=term%3DSpoU rRNA Methylase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00588;Ontology_term=GO:0003723,GO:0008173,GO:0006396 LTnewLM_6 Pfam protein_match 178402 178617 . + . Parent=LTnewLM_060010600.1:pep;Name=PF00588;signature_desc=SpoU rRNA Methylase family;Ontology_term=GO:0003723,GO:0008173,GO:0006396 ### LTnewLM_6 AUGUSTUS gene 180022 182004 1 + . ID=LTnewLM_060010700 LTnewLM_6 AUGUSTUS mRNA 180022 182004 1 + . ID=LTnewLM_060010700.1;Parent=LTnewLM_060010700 LTnewLM_6 AUGUSTUS CDS 180022 182004 1 + 0 ID=LTnewLM_060010700.1:CDS:1;Parent=LTnewLM_060010700.1 ### LTnewLM_6 . polypeptide 180022 182004 . + . ID=LTnewLM_060010700.1:pep;Derives_from=LTnewLM_060010700.1;orthologous_to=LmjF.06.0510_mRNA;ortholog_cluster=OG0007020;product=term%3DU-box domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04564;Ontology_term=GO:0004842,GO:0016567 LTnewLM_6 Pfam protein_match 181774 181950 . + . Parent=LTnewLM_060010700.1:pep;Name=PF04564;signature_desc=U-box domain;Ontology_term=GO:0004842,GO:0016567 ### LTnewLM_6 AUGUSTUS gene 184487 190129 1 + . ID=LTnewLM_060010800 LTnewLM_6 AUGUSTUS mRNA 184487 190129 1 + . ID=LTnewLM_060010800.1;Parent=LTnewLM_060010800 LTnewLM_6 AUGUSTUS CDS 184487 190129 1 + 0 ID=LTnewLM_060010800.1:CDS:1;Parent=LTnewLM_060010800.1 ### LTnewLM_6 . polypeptide 184487 190129 . + . ID=LTnewLM_060010800.1:pep;Derives_from=LTnewLM_060010800.1;orthologous_to=LmjF.06.0520_mRNA;ortholog_cluster=OG0007021;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 190813 191694 1 + . ID=LTnewLM_060010900 LTnewLM_6 AUGUSTUS mRNA 190813 191694 1 + . ID=LTnewLM_060010900.1;Parent=LTnewLM_060010900 LTnewLM_6 AUGUSTUS CDS 190813 191694 1 + 0 ID=LTnewLM_060010900.1:CDS:1;Parent=LTnewLM_060010900.1 ### LTnewLM_6 . polypeptide 190813 191694 . + . ID=LTnewLM_060010900.1:pep;Derives_from=LTnewLM_060010900.1;orthologous_to=LmjF.06.0530_mRNA;ortholog_cluster=OG0007022;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 193104 195713 1 + . ID=LTnewLM_060011000 LTnewLM_6 AUGUSTUS mRNA 193104 195713 1 + . ID=LTnewLM_060011000.1;Parent=LTnewLM_060011000 LTnewLM_6 AUGUSTUS CDS 193104 195713 1 + 0 ID=LTnewLM_060011000.1:CDS:1;Parent=LTnewLM_060011000.1 ### LTnewLM_6 . polypeptide 193104 195713 . + . ID=LTnewLM_060011000.1:pep;Derives_from=LTnewLM_060011000.1;orthologous_to=LmjF.06.0540_mRNA;ortholog_cluster=OG0007023;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 196573 201798 1 + . ID=LTnewLM_060011100 LTnewLM_6 AUGUSTUS mRNA 196573 201798 1 + . ID=LTnewLM_060011100.1;Parent=LTnewLM_060011100 LTnewLM_6 AUGUSTUS CDS 196573 201798 1 + 0 ID=LTnewLM_060011100.1:CDS:1;Parent=LTnewLM_060011100.1 ### LTnewLM_6 . polypeptide 196573 201798 . + . ID=LTnewLM_060011100.1:pep;Derives_from=LTnewLM_060011100.1;orthologous_to=LmjF.06.0550_mRNA;ortholog_cluster=OG0007024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 202731 203537 1 + . ID=LTnewLM_060011200 LTnewLM_6 AUGUSTUS mRNA 202731 203537 1 + . ID=LTnewLM_060011200.1;Parent=LTnewLM_060011200 LTnewLM_6 AUGUSTUS CDS 202731 203537 1 + 0 ID=LTnewLM_060011200.1:CDS:1;Parent=LTnewLM_060011200.1 ### LTnewLM_6 . polypeptide 202731 203537 . + . ID=LTnewLM_060011200.1:pep;Derives_from=LTnewLM_060011200.1;orthologous_to=LmjF.06.0560_mRNA;ortholog_cluster=OG0007025;product=term%3DdUTPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08761 LTnewLM_6 Pfam protein_match 202770 203300 . + . Parent=LTnewLM_060011200.1:pep;Name=PF08761;signature_desc=dUTPase ### LTnewLM_6 AUGUSTUS gene 204887 205324 1 + . ID=LTnewLM_060011300 LTnewLM_6 AUGUSTUS mRNA 204887 205324 1 + . ID=LTnewLM_060011300.1;Parent=LTnewLM_060011300 LTnewLM_6 AUGUSTUS CDS 204887 205324 1 + 0 ID=LTnewLM_060011300.1:CDS:1;Parent=LTnewLM_060011300.1 ### LTnewLM_6 . polypeptide 204887 205324 . + . ID=LTnewLM_060011300.1:pep;Derives_from=LTnewLM_060011300.1;orthologous_to=LTnewLM_060011400.1,LmjF.06.0570_mRNA,LmjF.06.0580_mRNA;ortholog_cluster=OG0000271;product=term%3DRibosomal protein L23%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00276;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_6 Pfam protein_match 205079 205255 . + . Parent=LTnewLM_060011300.1:pep;Name=PF00276;signature_desc=Ribosomal protein L23;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_6 AUGUSTUS gene 205782 206219 1 + . ID=LTnewLM_060011400 LTnewLM_6 AUGUSTUS mRNA 205782 206219 1 + . ID=LTnewLM_060011400.1;Parent=LTnewLM_060011400 LTnewLM_6 AUGUSTUS CDS 205782 206219 1 + 0 ID=LTnewLM_060011400.1:CDS:1;Parent=LTnewLM_060011400.1 ### LTnewLM_6 . polypeptide 205782 206219 . + . ID=LTnewLM_060011400.1:pep;Derives_from=LTnewLM_060011400.1;orthologous_to=LTnewLM_060011300.1,LmjF.06.0570_mRNA,LmjF.06.0580_mRNA;ortholog_cluster=OG0000271;product=term%3DRibosomal protein L23%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00276;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_6 Pfam protein_match 205974 206150 . + . Parent=LTnewLM_060011400.1:pep;Name=PF00276;signature_desc=Ribosomal protein L23;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_6 AUGUSTUS gene 207895 212397 1 + . ID=LTnewLM_060011500 LTnewLM_6 AUGUSTUS mRNA 207895 212397 1 + . ID=LTnewLM_060011500.1;Parent=LTnewLM_060011500 LTnewLM_6 AUGUSTUS CDS 207895 212397 1 + 0 ID=LTnewLM_060011500.1:CDS:1;Parent=LTnewLM_060011500.1 ### LTnewLM_6 . polypeptide 207895 212397 . + . ID=LTnewLM_060011500.1:pep;Derives_from=LTnewLM_060011500.1;orthologous_to=LmjF.06.0590_mRNA;ortholog_cluster=OG0007026;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 213036 217370 1 + . ID=LTnewLM_060011600 LTnewLM_6 AUGUSTUS mRNA 213036 217370 1 + . ID=LTnewLM_060011600.1;Parent=LTnewLM_060011600 LTnewLM_6 AUGUSTUS CDS 213036 217370 1 + 0 ID=LTnewLM_060011600.1:CDS:1;Parent=LTnewLM_060011600.1 ### LTnewLM_6 . polypeptide 213036 217370 . + . ID=LTnewLM_060011600.1:pep;Derives_from=LTnewLM_060011600.1;orthologous_to=LmjF.06.0600_mRNA;ortholog_cluster=OG0007027;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 218363 219523 1 + . ID=LTnewLM_060011700 LTnewLM_6 AUGUSTUS mRNA 218363 219523 1 + . ID=LTnewLM_060011700.1;Parent=LTnewLM_060011700 LTnewLM_6 AUGUSTUS CDS 218363 219523 1 + 0 ID=LTnewLM_060011700.1:CDS:1;Parent=LTnewLM_060011700.1 ### LTnewLM_6 . polypeptide 218363 219523 . + . ID=LTnewLM_060011700.1:pep;Derives_from=LTnewLM_060011700.1;orthologous_to=LmjF.06.0610_mRNA;ortholog_cluster=OG0007028;product=term%3DCarbonic anhydrase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00484;Ontology_term=GO:0008270,GO:0004089 LTnewLM_6 Pfam protein_match 218915 219424 . + . Parent=LTnewLM_060011700.1:pep;Name=PF00484;signature_desc=Carbonic anhydrase;Ontology_term=GO:0004089,GO:0008270 ### LTnewLM_6 AUGUSTUS gene 221294 224326 1 + . ID=LTnewLM_060011800 LTnewLM_6 AUGUSTUS mRNA 221294 224326 1 + . ID=LTnewLM_060011800.1;Parent=LTnewLM_060011800 LTnewLM_6 AUGUSTUS CDS 221294 224326 1 + 0 ID=LTnewLM_060011800.1:CDS:1;Parent=LTnewLM_060011800.1 ### LTnewLM_6 . polypeptide 221294 224326 . + . ID=LTnewLM_060011800.1:pep;Derives_from=LTnewLM_060011800.1;orthologous_to=LmjF.06.0620_mRNA;ortholog_cluster=OG0007029;product=term%3DPutative Phosphatase/Damage-control phosphatase ARMT1-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06888|Pfam:PF01937;Ontology_term=GO:0016791 LTnewLM_6 Pfam protein_match 221318 221569 . + . Parent=LTnewLM_060011800.1:pep;Name=PF06888;signature_desc=Putative Phosphatase;Ontology_term=GO:0016791 LTnewLM_6 Pfam protein_match 221879 222160 . + . Parent=LTnewLM_060011800.1:pep;Name=PF06888;signature_desc=Putative Phosphatase;Ontology_term=GO:0016791 LTnewLM_6 Pfam protein_match 223133 223768 . + . Parent=LTnewLM_060011800.1:pep;Name=PF01937;signature_desc=Damage-control phosphatase ARMT1-like domain LTnewLM_6 Pfam protein_match 223931 224023 . + . Parent=LTnewLM_060011800.1:pep;Name=PF01937;signature_desc=Damage-control phosphatase ARMT1-like domain ### LTnewLM_6 AUGUSTUS gene 226009 231951 0.99 + . ID=LTnewLM_060011900 LTnewLM_6 AUGUSTUS mRNA 226009 231951 0.99 + . ID=LTnewLM_060011900.1;Parent=LTnewLM_060011900 LTnewLM_6 AUGUSTUS CDS 226009 231951 0.99 + 0 ID=LTnewLM_060011900.1:CDS:1;Parent=LTnewLM_060011900.1 ### LTnewLM_6 . polypeptide 226009 231951 . + . ID=LTnewLM_060011900.1:pep;Derives_from=LTnewLM_060011900.1;orthologous_to=LmjF.06.0630_mRNA;ortholog_cluster=OG0007030;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 234062 243487 1 + . ID=LTnewLM_060012000 LTnewLM_6 AUGUSTUS mRNA 234062 243487 1 + . ID=LTnewLM_060012000.1;Parent=LTnewLM_060012000 LTnewLM_6 AUGUSTUS CDS 234062 243487 1 + 0 ID=LTnewLM_060012000.1:CDS:1;Parent=LTnewLM_060012000.1 ### LTnewLM_6 . polypeptide 234062 243487 . + . ID=LTnewLM_060012000.1:pep;Derives_from=LTnewLM_060012000.1;orthologous_to=LmjF.06.0640_mRNA;ortholog_cluster=OG0007031;product=term%3DFHA domain/Protein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00498|Pfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0005515,GO:0006468,GO:0005524 LTnewLM_6 Pfam protein_match 241505 241771 . + . Parent=LTnewLM_060012000.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 242174 243121 . + . Parent=LTnewLM_060012000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_6 Pfam protein_match 242177 242665 . + . Parent=LTnewLM_060012000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_6 Pfam protein_match 242888 243121 . + . Parent=LTnewLM_060012000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_6 AUGUSTUS gene 245108 248131 1 + . ID=LTnewLM_060012100 LTnewLM_6 AUGUSTUS mRNA 245108 248131 1 + . ID=LTnewLM_060012100.1;Parent=LTnewLM_060012100 LTnewLM_6 AUGUSTUS CDS 245108 248131 1 + 0 ID=LTnewLM_060012100.1:CDS:1;Parent=LTnewLM_060012100.1 ### LTnewLM_6 . polypeptide 245108 248131 . + . ID=LTnewLM_060012100.1:pep;Derives_from=LTnewLM_060012100.1;orthologous_to=LmjF.06.0650_mRNA;ortholog_cluster=OG0007032;product=term%3DSqualene-hopene cyclase N-terminal domain/Prenyltransferase and squalene oxidase repeat/Squalene-hopene cyclase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13249|Pfam:PF00432|Pfam:PF13243;Ontology_term=GO:0003824 LTnewLM_6 Pfam protein_match 246281 246886 . + . Parent=LTnewLM_060012100.1:pep;Name=PF13249;signature_desc=Squalene-hopene cyclase N-terminal domain LTnewLM_6 Pfam protein_match 246284 246409 . + . Parent=LTnewLM_060012100.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_6 Pfam protein_match 247067 248095 . + . Parent=LTnewLM_060012100.1:pep;Name=PF13243;signature_desc=Squalene-hopene cyclase C-terminal domain LTnewLM_6 Pfam protein_match 247589 247675 . + . Parent=LTnewLM_060012100.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 LTnewLM_6 Pfam protein_match 247742 247870 . + . Parent=LTnewLM_060012100.1:pep;Name=PF00432;signature_desc=Prenyltransferase and squalene oxidase repeat;Ontology_term=GO:0003824 ### LTnewLM_6 AUGUSTUS gene 250313 252352 1 + . ID=LTnewLM_060012200 LTnewLM_6 AUGUSTUS mRNA 250313 252352 1 + . ID=LTnewLM_060012200.1;Parent=LTnewLM_060012200 LTnewLM_6 AUGUSTUS CDS 250313 252352 1 + 0 ID=LTnewLM_060012200.1:CDS:1;Parent=LTnewLM_060012200.1 ### LTnewLM_6 . polypeptide 250313 252352 . + . ID=LTnewLM_060012200.1:pep;Derives_from=LTnewLM_060012200.1;orthologous_to=LmjF.06.0660_mRNA;ortholog_cluster=OG0007033;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 254811 258712 0.47 + . ID=LTnewLM_060012300 LTnewLM_6 AUGUSTUS mRNA 254811 258712 0.47 + . ID=LTnewLM_060012300.1;Parent=LTnewLM_060012300 LTnewLM_6 AUGUSTUS CDS 254811 258041 0.47 + 0 ID=LTnewLM_060012300.1:CDS:1;Parent=LTnewLM_060012300.1 LTnewLM_6 AUGUSTUS CDS 258092 258712 0.47 + 0 ID=LTnewLM_060012300.1:CDS:2;Parent=LTnewLM_060012300.1 ### LTnewLM_6 . polypeptide 254811 258712 . + . ID=LTnewLM_060012300.1:pep;Derives_from=LTnewLM_060012300.1;orthologous_to=LmjF.06.0670_mRNA;ortholog_cluster=OG0007034;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 260111 260842 1 + . ID=LTnewLM_060012400 LTnewLM_6 AUGUSTUS mRNA 260111 260842 1 + . ID=LTnewLM_060012400.1;Parent=LTnewLM_060012400 LTnewLM_6 AUGUSTUS CDS 260111 260842 1 + 0 ID=LTnewLM_060012400.1:CDS:1;Parent=LTnewLM_060012400.1 ### LTnewLM_6 . polypeptide 260111 260842 . + . ID=LTnewLM_060012400.1:pep;Derives_from=LTnewLM_060012400.1;orthologous_to=LmjF.06.0680_mRNA;ortholog_cluster=OG0007035;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 261573 262769 1 + . ID=LTnewLM_060012500 LTnewLM_6 AUGUSTUS mRNA 261573 262769 1 + . ID=LTnewLM_060012500.1;Parent=LTnewLM_060012500 LTnewLM_6 AUGUSTUS CDS 261573 262769 1 + 0 ID=LTnewLM_060012500.1:CDS:1;Parent=LTnewLM_060012500.1 ### LTnewLM_6 . polypeptide 261573 262769 . + . ID=LTnewLM_060012500.1:pep;Derives_from=LTnewLM_060012500.1;orthologous_to=LmjF.06.0685_mRNA;ortholog_cluster=OG0007036;product=term%3DCtf8%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09696 LTnewLM_6 Pfam protein_match 262044 262220 . + . Parent=LTnewLM_060012500.1:pep;Name=PF09696;signature_desc=Ctf8 ### LTnewLM_6 AUGUSTUS gene 263877 271751 1 + . ID=LTnewLM_060012600 LTnewLM_6 AUGUSTUS mRNA 263877 271751 1 + . ID=LTnewLM_060012600.1;Parent=LTnewLM_060012600 LTnewLM_6 AUGUSTUS CDS 263877 271751 1 + 0 ID=LTnewLM_060012600.1:CDS:1;Parent=LTnewLM_060012600.1 ### LTnewLM_6 . polypeptide 263877 271751 . + . ID=LTnewLM_060012600.1:pep;Derives_from=LTnewLM_060012600.1;orthologous_to=LmjF.06.0690_mRNA;ortholog_cluster=OG0007037;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 272832 275051 1 + . ID=LTnewLM_060012700 LTnewLM_6 AUGUSTUS mRNA 272832 275051 1 + . ID=LTnewLM_060012700.1;Parent=LTnewLM_060012700 LTnewLM_6 AUGUSTUS CDS 272832 275051 1 + 0 ID=LTnewLM_060012700.1:CDS:1;Parent=LTnewLM_060012700.1 ### LTnewLM_6 . polypeptide 272832 275051 . + . ID=LTnewLM_060012700.1:pep;Derives_from=LTnewLM_060012700.1;orthologous_to=LmjF.06.0700_mRNA;ortholog_cluster=OG0007038;product=term%3DC2 domain/Ankyrin repeats (3 copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00168|Pfam:PF12796;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 272847 273107 . + . Parent=LTnewLM_060012700.1:pep;Name=PF00168;signature_desc=C2 domain;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 274668 274928 . + . Parent=LTnewLM_060012700.1:pep;Name=PF12796;signature_desc=Ankyrin repeats (3 copies) ### LTnewLM_6 . pseudogene 279629 281725 . + . ID=LTnewLM_060012800:pseudogene;coverage=0.850;sequence_ID=0.751;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0710_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 279629 281725 . + . ID=LTnewLM_060012800.1;Parent=LTnewLM_060012800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 280085 281725 . + . ID=LTnewLM_060012800.1:pseudogenic_exon:1;Parent=LTnewLM_060012800.1;extra_copy_number=0 LTnewLM_6 . pseudogenic_transcript 280480 281725 . + . ID=LTnewLM_060012800.2;Parent=LTnewLM_060012800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 280580 281725 . + . ID=LTnewLM_060012800.2:pseudogenic_exon:1;Parent=LTnewLM_060012800.2;extra_copy_number=0 ### LTnewLM_6 . polypeptide 280085 281725 . + . ID=LTnewLM_060012800.1:pep;Derives_from=LTnewLM_060012800.1;orthologous_to=LTnewLM_060012800.2;ortholog_cluster=OG0007716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . polypeptide 280580 281725 . + . ID=LTnewLM_060012800.2:pep;Derives_from=LTnewLM_060012800.2;orthologous_to=LTnewLM_060012800.1;ortholog_cluster=OG0007716;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 283791 289088 1 + . ID=LTnewLM_060012900 LTnewLM_6 AUGUSTUS mRNA 283791 289088 1 + . ID=LTnewLM_060012900.1;Parent=LTnewLM_060012900 LTnewLM_6 AUGUSTUS CDS 283791 289088 1 + 0 ID=LTnewLM_060012900.1:CDS:1;Parent=LTnewLM_060012900.1 ### LTnewLM_6 . polypeptide 283791 289088 . + . ID=LTnewLM_060012900.1:pep;Derives_from=LTnewLM_060012900.1;orthologous_to=LmjF.06.0720_mRNA;ortholog_cluster=OG0007039;product=term%3DYEATS family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03366;Ontology_term=GO:0005634,GO:0006355 LTnewLM_6 Pfam protein_match 286266 286706 . + . Parent=LTnewLM_060012900.1:pep;Name=PF03366;signature_desc=YEATS family;Ontology_term=GO:0006355,GO:0005634 ### LTnewLM_6 AUGUSTUS gene 290367 291383 1 + . ID=LTnewLM_060013000 LTnewLM_6 AUGUSTUS mRNA 290367 291383 1 + . ID=LTnewLM_060013000.1;Parent=LTnewLM_060013000 LTnewLM_6 AUGUSTUS CDS 290367 291383 1 + 0 ID=LTnewLM_060013000.1:CDS:1;Parent=LTnewLM_060013000.1 ### LTnewLM_6 . polypeptide 290367 291383 . + . ID=LTnewLM_060013000.1:pep;Derives_from=LTnewLM_060013000.1;orthologous_to=LmjF.06.0730_mRNA;ortholog_cluster=OG0007040;product=term%3DPyridoxal-phosphate dependent enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00291 LTnewLM_6 Pfam protein_match 290415 291329 . + . Parent=LTnewLM_060013000.1:pep;Name=PF00291;signature_desc=Pyridoxal-phosphate dependent enzyme ### LTnewLM_6 . pseudogene 293241 296404 . + . ID=LTnewLM_060013100:pseudogene;coverage=0.981;sequence_ID=0.899;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0740_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 293241 296404 . + . ID=LTnewLM_060013100.1;Parent=LTnewLM_060013100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 293241 296404 . + . ID=LTnewLM_060013100.1:pseudogenic_exon:1;Parent=LTnewLM_060013100.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 293241 296404 . + . ID=LTnewLM_060013100.1:pep;Derives_from=LTnewLM_060013100.1;orthologous_to=LmjF.06.0740_mRNA;ortholog_cluster=OG0007717;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 297257 299223 . + . ID=LTnewLM_060013200:pseudogene;coverage=0.977;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0750_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 297257 299223 . + . ID=LTnewLM_060013200.1;Parent=LTnewLM_060013200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 297257 299223 . + . ID=LTnewLM_060013200.1:pseudogenic_exon:1;Parent=LTnewLM_060013200.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 297257 299223 . + . ID=LTnewLM_060013200.1:pep;Derives_from=LTnewLM_060013200.1;orthologous_to=LmjF.06.0750_mRNA;ortholog_cluster=OG0007718;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 Liftoff gene 300321 303857 . + . ID=LTnewLM_060013300;coverage=0.999;sequence_ID=0.925;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0760_0 LTnewLM_6 Liftoff mRNA 300321 303857 . + . ID=LTnewLM_060013300.1;Parent=LTnewLM_060013300;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 300321 303857 . + 0 ID=LTnewLM_060013300.1:CDS:1;Parent=LTnewLM_060013300.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 300321 303857 . + . ID=LTnewLM_060013300.1:pep;Derives_from=LTnewLM_060013300.1;orthologous_to=LmjF.06.0760_mRNA;ortholog_cluster=OG0007041;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 Liftoff gene 307952 313927 . + . ID=LTnewLM_060013400;coverage=0.987;sequence_ID=0.903;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0770_0 LTnewLM_6 Liftoff mRNA 307952 313927 . + . ID=LTnewLM_060013400.1;Parent=LTnewLM_060013400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 307952 313927 . + 0 ID=LTnewLM_060013400.1:CDS:1;Parent=LTnewLM_060013400.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 307952 313927 . + . ID=LTnewLM_060013400.1:pep;Derives_from=LTnewLM_060013400.1;orthologous_to=LmjF.06.0770_mRNA;ortholog_cluster=OG0007042;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_6 Pfam protein_match 310148 310330 . + . Parent=LTnewLM_060013400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 LTnewLM_6 Pfam protein_match 311288 311470 . + . Parent=LTnewLM_060013400.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_6 AUGUSTUS gene 319210 327861 1 + . ID=LTnewLM_060013500 LTnewLM_6 AUGUSTUS mRNA 319210 327861 1 + . ID=LTnewLM_060013500.1;Parent=LTnewLM_060013500 LTnewLM_6 AUGUSTUS CDS 319210 327861 1 + 0 ID=LTnewLM_060013500.1:CDS:1;Parent=LTnewLM_060013500.1 ### LTnewLM_6 . polypeptide 319210 327861 . + . ID=LTnewLM_060013500.1:pep;Derives_from=LTnewLM_060013500.1;orthologous_to=LmjF.06.0780_mRNA;ortholog_cluster=OG0007043;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 330500 333623 0.61 + . ID=LTnewLM_060013600 LTnewLM_6 AUGUSTUS mRNA 330500 333623 0.61 + . ID=LTnewLM_060013600.1;Parent=LTnewLM_060013600 LTnewLM_6 AUGUSTUS CDS 330500 333420 0.97 + 0 ID=LTnewLM_060013600.1:CDS:1;Parent=LTnewLM_060013600.1 LTnewLM_6 AUGUSTUS CDS 333605 333623 0.61 + 1 ID=LTnewLM_060013600.1:CDS:2;Parent=LTnewLM_060013600.1 ### LTnewLM_6 . polypeptide 330500 333623 . + . ID=LTnewLM_060013600.1:pep;Derives_from=LTnewLM_060013600.1;orthologous_to=LmjF.06.0790_mRNA;ortholog_cluster=OG0007044;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 334702 339495 1 + . ID=LTnewLM_060013700 LTnewLM_6 AUGUSTUS mRNA 334702 339495 1 + . ID=LTnewLM_060013700.1;Parent=LTnewLM_060013700 LTnewLM_6 AUGUSTUS CDS 334702 339495 1 + 0 ID=LTnewLM_060013700.1:CDS:1;Parent=LTnewLM_060013700.1 ### LTnewLM_6 . polypeptide 334702 339495 . + . ID=LTnewLM_060013700.1:pep;Derives_from=LTnewLM_060013700.1;orthologous_to=LmjF.06.0800_mRNA;ortholog_cluster=OG0007045;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 341371 352102 . + . ID=LTnewLM_060013800:pseudogene;coverage=0.996;sequence_ID=0.908;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0810_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 341371 352102 . + . ID=LTnewLM_060013800.1;Parent=LTnewLM_060013800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 341371 352102 . + . ID=LTnewLM_060013800.1:pseudogenic_exon:1;Parent=LTnewLM_060013800.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 341371 352102 . + . ID=LTnewLM_060013800.1:pep;Derives_from=LTnewLM_060013800.1;orthologous_to=LmjF.06.0810_mRNA;ortholog_cluster=OG0007719;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 352844 354082 1 + . ID=LTnewLM_060013900 LTnewLM_6 AUGUSTUS mRNA 352844 354082 1 + . ID=LTnewLM_060013900.1;Parent=LTnewLM_060013900 LTnewLM_6 AUGUSTUS CDS 352844 354082 1 + 0 ID=LTnewLM_060013900.1:CDS:1;Parent=LTnewLM_060013900.1 ### LTnewLM_6 . polypeptide 352844 354082 . + . ID=LTnewLM_060013900.1:pep;Derives_from=LTnewLM_060013900.1;orthologous_to=LmjF.06.0820_mRNA;ortholog_cluster=OG0007046;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 356382 360539 1 + . ID=LTnewLM_060014000 LTnewLM_6 AUGUSTUS mRNA 356382 360539 1 + . ID=LTnewLM_060014000.1;Parent=LTnewLM_060014000 LTnewLM_6 AUGUSTUS CDS 356382 360539 1 + 0 ID=LTnewLM_060014000.1:CDS:1;Parent=LTnewLM_060014000.1 ### LTnewLM_6 . polypeptide 356382 360539 . + . ID=LTnewLM_060014000.1:pep;Derives_from=LTnewLM_060014000.1;orthologous_to=LmjF.06.0830_mRNA;ortholog_cluster=OG0007047;product=term%3Dlipin%2C N-terminal conserved region/LNS2 (Lipin/Ned1/Smp2)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04571|Pfam:PF08235 LTnewLM_6 Pfam protein_match 356433 356624 . + . Parent=LTnewLM_060014000.1:pep;Name=PF04571;signature_desc=lipin%2C N-terminal conserved region LTnewLM_6 Pfam protein_match 358206 358871 . + . Parent=LTnewLM_060014000.1:pep;Name=PF08235;signature_desc=LNS2 (Lipin/Ned1/Smp2) ### LTnewLM_6 AUGUSTUS gene 361959 362657 1 + . ID=LTnewLM_060014100 LTnewLM_6 AUGUSTUS mRNA 361959 362657 1 + . ID=LTnewLM_060014100.1;Parent=LTnewLM_060014100 LTnewLM_6 AUGUSTUS CDS 361959 362657 1 + 0 ID=LTnewLM_060014100.1:CDS:1;Parent=LTnewLM_060014100.1 ### LTnewLM_6 . polypeptide 361959 362657 . + . ID=LTnewLM_060014100.1:pep;Derives_from=LTnewLM_060014100.1;orthologous_to=LmjF.06.0840_mRNA;ortholog_cluster=OG0007048;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 364803 375548 1 + . ID=LTnewLM_060014200 LTnewLM_6 AUGUSTUS mRNA 364803 375548 1 + . ID=LTnewLM_060014200.1;Parent=LTnewLM_060014200 LTnewLM_6 AUGUSTUS CDS 364803 375548 1 + 0 ID=LTnewLM_060014200.1:CDS:1;Parent=LTnewLM_060014200.1 ### LTnewLM_6 . polypeptide 364803 375548 . + . ID=LTnewLM_060014200.1:pep;Derives_from=LTnewLM_060014200.1;orthologous_to=LmjF.06.0850_mRNA;ortholog_cluster=OG0007049;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 376626 378188 1 + . ID=LTnewLM_060014300 LTnewLM_6 AUGUSTUS mRNA 376626 378188 1 + . ID=LTnewLM_060014300.1;Parent=LTnewLM_060014300 LTnewLM_6 AUGUSTUS CDS 376626 378188 1 + 0 ID=LTnewLM_060014300.1:CDS:1;Parent=LTnewLM_060014300.1 ### LTnewLM_6 . polypeptide 376626 378188 . + . ID=LTnewLM_060014300.1:pep;Derives_from=LTnewLM_060014300.1;orthologous_to=LmjF.06.0860_mRNA;ortholog_cluster=OG0007050;product=term%3DDihydrofolate reductase/Thymidylate synthase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00186|Pfam:PF00303;Ontology_term=GO:0006231,GO:0004146,GO:0009165,GO:0055114,GO:0006545,GO:0004799 LTnewLM_6 Pfam protein_match 376704 377303 . + . Parent=LTnewLM_060014300.1:pep;Name=PF00186;signature_desc=Dihydrofolate reductase;Ontology_term=GO:0004146,GO:0006545,GO:0009165,GO:0055114 LTnewLM_6 Pfam protein_match 377331 378182 . + . Parent=LTnewLM_060014300.1:pep;Name=PF00303;signature_desc=Thymidylate synthase;Ontology_term=GO:0004799,GO:0006231 ### LTnewLM_6 AUGUSTUS gene 379934 381250 1 + . ID=LTnewLM_060014400 LTnewLM_6 AUGUSTUS mRNA 379934 381250 1 + . ID=LTnewLM_060014400.1;Parent=LTnewLM_060014400 LTnewLM_6 AUGUSTUS CDS 379934 381250 1 + 0 ID=LTnewLM_060014400.1:CDS:1;Parent=LTnewLM_060014400.1 ### LTnewLM_6 . polypeptide 379934 381250 . + . ID=LTnewLM_060014400.1:pep;Derives_from=LTnewLM_060014400.1;orthologous_to=LmjF.06.0870_mRNA;ortholog_cluster=OG0007051;product=term%3DRibosomal protein L11 methyltransferase (PrmA)/Lysine methyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06325|Pfam:PF10294;Ontology_term=GO:0006479,GO:0005737,GO:0008276 LTnewLM_6 Pfam protein_match 380294 380539 . + . Parent=LTnewLM_060014400.1:pep;Name=PF06325;signature_desc=Ribosomal protein L11 methyltransferase (PrmA);Ontology_term=GO:0008276,GO:0006479,GO:0005737 LTnewLM_6 Pfam protein_match 380312 380482 . + . Parent=LTnewLM_060014400.1:pep;Name=PF10294;signature_desc=Lysine methyltransferase ### LTnewLM_6 AUGUSTUS gene 382737 383987 1 + . ID=LTnewLM_060014500 LTnewLM_6 AUGUSTUS mRNA 382737 383987 1 + . ID=LTnewLM_060014500.1;Parent=LTnewLM_060014500 LTnewLM_6 AUGUSTUS CDS 382737 383987 1 + 0 ID=LTnewLM_060014500.1:CDS:1;Parent=LTnewLM_060014500.1 ### LTnewLM_6 . polypeptide 382737 383987 . + . ID=LTnewLM_060014500.1:pep;Derives_from=LTnewLM_060014500.1;orthologous_to=LmjF.06.0880_mRNA;ortholog_cluster=OG0007052;product=term%3DAcyl-CoA dehydrogenase%2C N-terminal domain/Acyl-CoA dehydrogenase%2C middle domain/Acyl-CoA dehydrogenase%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02771|Pfam:PF02770|Pfam:PF00441|Pfam:PF08028;Ontology_term=GO:0008152,GO:0055114,GO:0003995,GO:0050660,GO:0016627 LTnewLM_6 Pfam protein_match 382872 383198 . + . Parent=LTnewLM_060014500.1:pep;Name=PF02771;signature_desc=Acyl-CoA dehydrogenase%2C N-terminal domain;Ontology_term=GO:0016627,GO:0050660,GO:0008152,GO:0055114 LTnewLM_6 Pfam protein_match 383217 383486 . + . Parent=LTnewLM_060014500.1:pep;Name=PF02770;signature_desc=Acyl-CoA dehydrogenase%2C middle domain;Ontology_term=GO:0003995,GO:0055114 LTnewLM_6 Pfam protein_match 383523 383963 . + . Parent=LTnewLM_060014500.1:pep;Name=PF00441;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain;Ontology_term=GO:0016627,GO:0055114 LTnewLM_6 Pfam protein_match 383574 383933 . + . Parent=LTnewLM_060014500.1:pep;Name=PF08028;signature_desc=Acyl-CoA dehydrogenase%2C C-terminal domain ### LTnewLM_6 AUGUSTUS gene 385729 388065 1 + . ID=LTnewLM_060014600 LTnewLM_6 AUGUSTUS mRNA 385729 388065 1 + . ID=LTnewLM_060014600.1;Parent=LTnewLM_060014600 LTnewLM_6 AUGUSTUS CDS 385729 388065 1 + 0 ID=LTnewLM_060014600.1:CDS:1;Parent=LTnewLM_060014600.1 ### LTnewLM_6 . polypeptide 385729 388065 . + . ID=LTnewLM_060014600.1:pep;Derives_from=LTnewLM_060014600.1;orthologous_to=LmjF.06.0890_mRNA;ortholog_cluster=OG0007053;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 389195 394732 1 + . ID=LTnewLM_060014700 LTnewLM_6 AUGUSTUS mRNA 389195 394732 1 + . ID=LTnewLM_060014700.1;Parent=LTnewLM_060014700 LTnewLM_6 AUGUSTUS CDS 389195 394732 1 + 0 ID=LTnewLM_060014700.1:CDS:1;Parent=LTnewLM_060014700.1 ### LTnewLM_6 . polypeptide 389195 394732 . + . ID=LTnewLM_060014700.1:pep;Derives_from=LTnewLM_060014700.1;orthologous_to=LmjF.06.0900_mRNA;ortholog_cluster=OG0007054;product=term%3DProtein phosphatase 2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00481;Ontology_term=GO:0003824 LTnewLM_6 Pfam protein_match 393350 393562 . + . Parent=LTnewLM_060014700.1:pep;Name=PF00481;signature_desc=Protein phosphatase 2C;Ontology_term=GO:0003824 ### LTnewLM_6 AUGUSTUS gene 395606 396271 1 + . ID=LTnewLM_060014800 LTnewLM_6 AUGUSTUS mRNA 395606 396271 1 + . ID=LTnewLM_060014800.1;Parent=LTnewLM_060014800 LTnewLM_6 AUGUSTUS CDS 395606 396271 1 + 0 ID=LTnewLM_060014800.1:CDS:1;Parent=LTnewLM_060014800.1 ### LTnewLM_6 . polypeptide 395606 396271 . + . ID=LTnewLM_060014800.1:pep;Derives_from=LTnewLM_060014800.1;orthologous_to=LmjF.06.0910_mRNA;ortholog_cluster=OG0007055;product=term%3DPeptidyl-tRNA hydrolase PTH2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01981;Ontology_term=GO:0004045 LTnewLM_6 Pfam protein_match 395870 396265 . + . Parent=LTnewLM_060014800.1:pep;Name=PF01981;signature_desc=Peptidyl-tRNA hydrolase PTH2;Ontology_term=GO:0004045 ### LTnewLM_6 AUGUSTUS gene 396959 398267 0.52 + . ID=LTnewLM_060014900 LTnewLM_6 AUGUSTUS mRNA 396959 398267 0.52 + . ID=LTnewLM_060014900.1;Parent=LTnewLM_060014900 LTnewLM_6 AUGUSTUS CDS 396959 397737 0.52 + 0 ID=LTnewLM_060014900.1:CDS:1;Parent=LTnewLM_060014900.1 LTnewLM_6 AUGUSTUS CDS 397817 398267 0.96 + 1 ID=LTnewLM_060014900.1:CDS:2;Parent=LTnewLM_060014900.1 ### LTnewLM_6 . polypeptide 396959 398267 . + . ID=LTnewLM_060014900.1:pep;Derives_from=LTnewLM_060014900.1;orthologous_to=LmjF.06.0920_mRNA;ortholog_cluster=OG0007056;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 400304 402496 1 + . ID=LTnewLM_060015000 LTnewLM_6 AUGUSTUS mRNA 400304 402496 1 + . ID=LTnewLM_060015000.1;Parent=LTnewLM_060015000 LTnewLM_6 AUGUSTUS CDS 400304 402496 1 + 0 ID=LTnewLM_060015000.1:CDS:1;Parent=LTnewLM_060015000.1 ### LTnewLM_6 . polypeptide 400304 402496 . + . ID=LTnewLM_060015000.1:pep;Derives_from=LTnewLM_060015000.1;orthologous_to=LmjF.06.0930_mRNA;ortholog_cluster=OG0007057;product=term%3DNADH:flavin oxidoreductase / NADH oxidase family/Pyridine nucleotide-disulphide oxidoreductase/HI0933-like protein/FAD dependent oxidoreductase/FAD binding domain/NAD(P)-binding Rossmann-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00724|Pfam:PF07992|Pfam:PF03486|Pfam:PF01266|Pfam:PF00890|Pfam:PF12831|Pfam:PF13450;Ontology_term=GO:0055114,GO:0016491,GO:0010181 LTnewLM_6 Pfam protein_match 400367 401389 . + . Parent=LTnewLM_060015000.1:pep;Name=PF00724;signature_desc=NADH:flavin oxidoreductase / NADH oxidase family;Ontology_term=GO:0010181,GO:0016491,GO:0055114 LTnewLM_6 Pfam protein_match 401525 402409 . + . Parent=LTnewLM_060015000.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_6 Pfam protein_match 401528 401641 . + . Parent=LTnewLM_060015000.1:pep;Name=PF03486;signature_desc=HI0933-like protein LTnewLM_6 Pfam protein_match 401531 401635 . + . Parent=LTnewLM_060015000.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_6 Pfam protein_match 401531 401647 . + . Parent=LTnewLM_060015000.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_6 Pfam protein_match 401531 401710 . + . Parent=LTnewLM_060015000.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_6 Pfam protein_match 401537 401662 . + . Parent=LTnewLM_060015000.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain ### LTnewLM_6 AUGUSTUS gene 404046 405953 1 + . ID=LTnewLM_060015100 LTnewLM_6 AUGUSTUS mRNA 404046 405953 1 + . ID=LTnewLM_060015100.1;Parent=LTnewLM_060015100 LTnewLM_6 AUGUSTUS CDS 404046 405953 1 + 0 ID=LTnewLM_060015100.1:CDS:1;Parent=LTnewLM_060015100.1 ### LTnewLM_6 . polypeptide 404046 405953 . + . ID=LTnewLM_060015100.1:pep;Derives_from=LTnewLM_060015100.1;orthologous_to=LmjF.06.0940_mRNA;ortholog_cluster=OG0007058;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 407040 409052 1 + . ID=LTnewLM_060015200 LTnewLM_6 AUGUSTUS mRNA 407040 409052 1 + . ID=LTnewLM_060015200.1;Parent=LTnewLM_060015200 LTnewLM_6 AUGUSTUS CDS 407040 409052 1 + 0 ID=LTnewLM_060015200.1:CDS:1;Parent=LTnewLM_060015200.1 ### LTnewLM_6 . polypeptide 407040 409052 . + . ID=LTnewLM_060015200.1:pep;Derives_from=LTnewLM_060015200.1;orthologous_to=LmjF.06.0950_mRNA;ortholog_cluster=OG0007059;product=term%3DGlutamine amidotransferase domain/SIS domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13522|Pfam:PF13537|Pfam:PF01380;Ontology_term=GO:0005975,GO:0008152,GO:0030246 LTnewLM_6 Pfam protein_match 407325 407540 . + . Parent=LTnewLM_060015200.1:pep;Name=PF13522;signature_desc=Glutamine amidotransferase domain LTnewLM_6 Pfam protein_match 407391 407621 . + . Parent=LTnewLM_060015200.1:pep;Name=PF13537;signature_desc=Glutamine amidotransferase domain;Ontology_term=GO:0008152 LTnewLM_6 Pfam protein_match 408096 408470 . + . Parent=LTnewLM_060015200.1:pep;Name=PF01380;signature_desc=SIS domain;Ontology_term=GO:0030246,GO:0005975 LTnewLM_6 Pfam protein_match 408606 408992 . + . Parent=LTnewLM_060015200.1:pep;Name=PF01380;signature_desc=SIS domain;Ontology_term=GO:0030246,GO:0005975 ### LTnewLM_6 . pseudogene 410531 411267 . + . ID=LTnewLM_060015300:pseudogene;coverage=0.998;sequence_ID=0.964;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0960_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 410531 411267 . + . ID=LTnewLM_060015300.1;Parent=LTnewLM_060015300:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 410531 411267 . + . ID=LTnewLM_060015300.1:pseudogenic_exon:1;Parent=LTnewLM_060015300.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 410531 411267 . + . ID=LTnewLM_060015300.1:pep;Derives_from=LTnewLM_060015300.1;product=term%3Dhypothetical protein ### LTnewLM_6 Liftoff gene 412402 417372 . + . ID=LTnewLM_060015400;coverage=0.997;sequence_ID=0.936;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.0970_0 LTnewLM_6 Liftoff mRNA 412402 417372 . + . ID=LTnewLM_060015400.1;Parent=LTnewLM_060015400;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 412402 417372 . + 0 ID=LTnewLM_060015400.1:CDS:1;Parent=LTnewLM_060015400.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 412402 417372 . + . ID=LTnewLM_060015400.1:pep;Derives_from=LTnewLM_060015400.1;orthologous_to=LmjF.06.0970_mRNA;ortholog_cluster=OG0007060;product=term%3DProtein NO VEIN%2C C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13020 LTnewLM_6 Pfam protein_match 416914 417267 . + . Parent=LTnewLM_060015400.1:pep;Name=PF13020;signature_desc=Protein NO VEIN%2C C-terminal ### LTnewLM_6 AUGUSTUS gene 418433 421522 1 + . ID=LTnewLM_060015500 LTnewLM_6 AUGUSTUS mRNA 418433 421522 1 + . ID=LTnewLM_060015500.1;Parent=LTnewLM_060015500 LTnewLM_6 AUGUSTUS CDS 418433 421522 1 + 0 ID=LTnewLM_060015500.1:CDS:1;Parent=LTnewLM_060015500.1 ### LTnewLM_6 . polypeptide 418433 421522 . + . ID=LTnewLM_060015500.1:pep;Derives_from=LTnewLM_060015500.1;orthologous_to=LmjF.06.0980_mRNA;ortholog_cluster=OG0007061;product=term%3DLeucine rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13855;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 418652 418816 . + . Parent=LTnewLM_060015500.1:pep;Name=PF13855;signature_desc=Leucine rich repeat;Ontology_term=GO:0005515 ### LTnewLM_6 AUGUSTUS gene 423842 427481 0.54 + . ID=LTnewLM_060015600 LTnewLM_6 AUGUSTUS mRNA 423842 427481 0.54 + . ID=LTnewLM_060015600.1;Parent=LTnewLM_060015600 LTnewLM_6 AUGUSTUS CDS 423842 426698 0.98 + 0 ID=LTnewLM_060015600.1:CDS:1;Parent=LTnewLM_060015600.1 LTnewLM_6 AUGUSTUS CDS 426772 427481 0.54 + 2 ID=LTnewLM_060015600.1:CDS:2;Parent=LTnewLM_060015600.1 ### LTnewLM_6 . polypeptide 423842 427481 . + . ID=LTnewLM_060015600.1:pep;Derives_from=LTnewLM_060015600.1;orthologous_to=LmjF.06.0990_mRNA;ortholog_cluster=OG0007062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 428385 428852 1 + . ID=LTnewLM_060015700 LTnewLM_6 AUGUSTUS mRNA 428385 428852 1 + . ID=LTnewLM_060015700.1;Parent=LTnewLM_060015700 LTnewLM_6 AUGUSTUS CDS 428385 428852 1 + 0 ID=LTnewLM_060015700.1:CDS:1;Parent=LTnewLM_060015700.1 ### LTnewLM_6 . polypeptide 428385 428852 . + . ID=LTnewLM_060015700.1:pep;Derives_from=LTnewLM_060015700.1;orthologous_to=LmjF.06.0995_mRNA;ortholog_cluster=OG0007063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 429414 430919 1 + . ID=LTnewLM_060015800 LTnewLM_6 AUGUSTUS mRNA 429414 430919 1 + . ID=LTnewLM_060015800.1;Parent=LTnewLM_060015800 LTnewLM_6 AUGUSTUS CDS 429414 430919 1 + 0 ID=LTnewLM_060015800.1:CDS:1;Parent=LTnewLM_060015800.1 ### LTnewLM_6 . polypeptide 429414 430919 . + . ID=LTnewLM_060015800.1:pep;Derives_from=LTnewLM_060015800.1;orthologous_to=LmjF.06.1000_mRNA;ortholog_cluster=OG0007064;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_6 Pfam protein_match 429990 430817 . + . Parent=LTnewLM_060015800.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_6 AUGUSTUS gene 431830 434134 0.61 + . ID=LTnewLM_060015900 LTnewLM_6 AUGUSTUS mRNA 431830 434134 0.61 + . ID=LTnewLM_060015900.1;Parent=LTnewLM_060015900 LTnewLM_6 AUGUSTUS CDS 431830 433438 0.66 + 0 ID=LTnewLM_060015900.1:CDS:1;Parent=LTnewLM_060015900.1 LTnewLM_6 AUGUSTUS CDS 433512 434134 0.61 + 2 ID=LTnewLM_060015900.1:CDS:2;Parent=LTnewLM_060015900.1 ### LTnewLM_6 . polypeptide 431830 434134 . + . ID=LTnewLM_060015900.1:pep;Derives_from=LTnewLM_060015900.1;orthologous_to=LmjF.06.1010_mRNA;ortholog_cluster=OG0007065;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 434863 435555 1 + . ID=LTnewLM_060016000 LTnewLM_6 AUGUSTUS mRNA 434863 435555 1 + . ID=LTnewLM_060016000.1;Parent=LTnewLM_060016000 LTnewLM_6 AUGUSTUS CDS 434863 435555 1 + 0 ID=LTnewLM_060016000.1:CDS:1;Parent=LTnewLM_060016000.1 ### LTnewLM_6 . polypeptide 434863 435555 . + . ID=LTnewLM_060016000.1:pep;Derives_from=LTnewLM_060016000.1;orthologous_to=LmjF.06.1020_mRNA;ortholog_cluster=OG0007066;product=term%3DG-patch domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01585|Pfam:PF12656;Ontology_term=GO:0003676 LTnewLM_6 Pfam protein_match 434905 435030 . + . Parent=LTnewLM_060016000.1:pep;Name=PF01585;signature_desc=G-patch domain;Ontology_term=GO:0003676 LTnewLM_6 Pfam protein_match 434908 435033 . + . Parent=LTnewLM_060016000.1:pep;Name=PF12656;signature_desc=G-patch domain ### LTnewLM_6 AUGUSTUS gene 436838 439519 1 + . ID=LTnewLM_060016100 LTnewLM_6 AUGUSTUS mRNA 436838 439519 1 + . ID=LTnewLM_060016100.1;Parent=LTnewLM_060016100 LTnewLM_6 AUGUSTUS CDS 436838 439519 1 + 0 ID=LTnewLM_060016100.1:CDS:1;Parent=LTnewLM_060016100.1 ### LTnewLM_6 . polypeptide 436838 439519 . + . ID=LTnewLM_060016100.1:pep;Derives_from=LTnewLM_060016100.1;orthologous_to=LmjF.06.1030_mRNA;ortholog_cluster=OG0007067;product=term%3DKinesin motor domain/Microtubule binding%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225|Pfam:PF16796;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_6 Pfam protein_match 436940 437959 . + . Parent=LTnewLM_060016100.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_6 Pfam protein_match 436946 437275 . + . Parent=LTnewLM_060016100.1:pep;Name=PF16796;signature_desc=Microtubule binding ### LTnewLM_6 AUGUSTUS gene 439990 442164 1 + . ID=LTnewLM_060016200 LTnewLM_6 AUGUSTUS mRNA 439990 442164 1 + . ID=LTnewLM_060016200.1;Parent=LTnewLM_060016200 LTnewLM_6 AUGUSTUS CDS 439990 442164 1 + 0 ID=LTnewLM_060016200.1:CDS:1;Parent=LTnewLM_060016200.1 ### LTnewLM_6 . polypeptide 439990 442164 . + . ID=LTnewLM_060016200.1:pep;Derives_from=LTnewLM_060016200.1;orthologous_to=LmjF.06.1040_mRNA;ortholog_cluster=OG0007068;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 443191 443592 1 + . ID=LTnewLM_060016300 LTnewLM_6 AUGUSTUS mRNA 443191 443592 1 + . ID=LTnewLM_060016300.1;Parent=LTnewLM_060016300 LTnewLM_6 AUGUSTUS CDS 443191 443592 1 + 0 ID=LTnewLM_060016300.1:CDS:1;Parent=LTnewLM_060016300.1 ### LTnewLM_6 . polypeptide 443191 443592 . + . ID=LTnewLM_060016300.1:pep;Derives_from=LTnewLM_060016300.1;orthologous_to=LmjF.06.1050_mRNA;ortholog_cluster=OG0007069;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_6 Pfam protein_match 443263 443574 . + . Parent=LTnewLM_060016300.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_6 AUGUSTUS gene 445716 446750 1 + . ID=LTnewLM_060016400 LTnewLM_6 AUGUSTUS mRNA 445716 446750 1 + . ID=LTnewLM_060016400.1;Parent=LTnewLM_060016400 LTnewLM_6 AUGUSTUS CDS 445716 446750 1 + 0 ID=LTnewLM_060016400.1:CDS:1;Parent=LTnewLM_060016400.1 ### LTnewLM_6 . polypeptide 445716 446750 . + . ID=LTnewLM_060016400.1:pep;Derives_from=LTnewLM_060016400.1;orthologous_to=LmjF.06.1060_mRNA;ortholog_cluster=OG0007070;product=term%3D2OG-Fe(II) oxygenase superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13532 LTnewLM_6 Pfam protein_match 446196 446483 . + . Parent=LTnewLM_060016400.1:pep;Name=PF13532;signature_desc=2OG-Fe(II) oxygenase superfamily ### LTnewLM_6 AUGUSTUS gene 448154 448999 1 + . ID=LTnewLM_060016500 LTnewLM_6 AUGUSTUS mRNA 448154 448999 1 + . ID=LTnewLM_060016500.1;Parent=LTnewLM_060016500 LTnewLM_6 AUGUSTUS CDS 448154 448999 1 + 0 ID=LTnewLM_060016500.1:CDS:1;Parent=LTnewLM_060016500.1 ### LTnewLM_6 . polypeptide 448154 448999 . + . ID=LTnewLM_060016500.1:pep;Derives_from=LTnewLM_060016500.1;orthologous_to=LmjF.06.1070_mRNA;ortholog_cluster=OG0007071;product=term%3DDeoC/LacD family aldolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01791;Ontology_term=GO:0016829 LTnewLM_6 Pfam protein_match 448367 448984 . + . Parent=LTnewLM_060016500.1:pep;Name=PF01791;signature_desc=DeoC/LacD family aldolase;Ontology_term=GO:0016829 ### LTnewLM_6 AUGUSTUS gene 450746 451420 1 + . ID=LTnewLM_060016600 LTnewLM_6 AUGUSTUS mRNA 450746 451420 1 + . ID=LTnewLM_060016600.1;Parent=LTnewLM_060016600 LTnewLM_6 AUGUSTUS CDS 450746 451420 1 + 0 ID=LTnewLM_060016600.1:CDS:1;Parent=LTnewLM_060016600.1 ### LTnewLM_6 . polypeptide 450746 451420 . + . ID=LTnewLM_060016600.1:pep;Derives_from=LTnewLM_060016600.1;orthologous_to=LmjF.06.1080_mRNA;ortholog_cluster=OG0007072;product=term%3DStaphylococcal nuclease homologue%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00565 LTnewLM_6 Pfam protein_match 450914 451246 . + . Parent=LTnewLM_060016600.1:pep;Name=PF00565;signature_desc=Staphylococcal nuclease homologue ### LTnewLM_6 AUGUSTUS gene 452950 454737 1 + . ID=LTnewLM_060016700 LTnewLM_6 AUGUSTUS mRNA 452950 454737 1 + . ID=LTnewLM_060016700.1;Parent=LTnewLM_060016700 LTnewLM_6 AUGUSTUS CDS 452950 454737 1 + 0 ID=LTnewLM_060016700.1:CDS:1;Parent=LTnewLM_060016700.1 ### LTnewLM_6 . polypeptide 452950 454737 . + . ID=LTnewLM_060016700.1:pep;Derives_from=LTnewLM_060016700.1;orthologous_to=LmjF.06.1090_mRNA;ortholog_cluster=OG0007073;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 455877 456785 1 + . ID=LTnewLM_060016800 LTnewLM_6 AUGUSTUS mRNA 455877 456785 1 + . ID=LTnewLM_060016800.1;Parent=LTnewLM_060016800 LTnewLM_6 AUGUSTUS CDS 455877 456785 1 + 0 ID=LTnewLM_060016800.1:CDS:1;Parent=LTnewLM_060016800.1 ### LTnewLM_6 . polypeptide 455877 456785 . + . ID=LTnewLM_060016800.1:pep;Derives_from=LTnewLM_060016800.1;orthologous_to=LmjF.06.1100_mRNA;ortholog_cluster=OG0007074;product=term%3DpATOM36 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19224 LTnewLM_6 Pfam protein_match 455889 456659 . + . Parent=LTnewLM_060016800.1:pep;Name=PF19224;signature_desc=pATOM36 family ### LTnewLM_6 AUGUSTUS gene 459127 462390 1 + . ID=LTnewLM_060016900 LTnewLM_6 AUGUSTUS mRNA 459127 462390 1 + . ID=LTnewLM_060016900.1;Parent=LTnewLM_060016900 LTnewLM_6 AUGUSTUS CDS 459127 462390 1 + 0 ID=LTnewLM_060016900.1:CDS:1;Parent=LTnewLM_060016900.1 ### LTnewLM_6 . polypeptide 459127 462390 . + . ID=LTnewLM_060016900.1:pep;Derives_from=LTnewLM_060016900.1;orthologous_to=LmjF.06.1110_mRNA;ortholog_cluster=OG0007075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 464948 465769 1 + . ID=LTnewLM_060017000 LTnewLM_6 AUGUSTUS mRNA 464948 465769 1 + . ID=LTnewLM_060017000.1;Parent=LTnewLM_060017000 LTnewLM_6 AUGUSTUS CDS 464948 465769 1 + 0 ID=LTnewLM_060017000.1:CDS:1;Parent=LTnewLM_060017000.1 ### LTnewLM_6 . polypeptide 464948 465769 . + . ID=LTnewLM_060017000.1:pep;Derives_from=LTnewLM_060017000.1;orthologous_to=LmjF.06.1120_mRNA;ortholog_cluster=OG0007076;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 466623 467612 1 + . ID=LTnewLM_060017100 LTnewLM_6 AUGUSTUS mRNA 466623 467612 1 + . ID=LTnewLM_060017100.1;Parent=LTnewLM_060017100 LTnewLM_6 AUGUSTUS CDS 466623 467612 1 + 0 ID=LTnewLM_060017100.1:CDS:1;Parent=LTnewLM_060017100.1 ### LTnewLM_6 . polypeptide 466623 467612 . + . ID=LTnewLM_060017100.1:pep;Derives_from=LTnewLM_060017100.1;orthologous_to=LmjF.06.1130_mRNA;ortholog_cluster=OG0007077;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 467766 470280 . + . ID=LTnewLM_060017200:pseudogene;coverage=0.988;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.1140_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 467766 470280 . + . ID=LTnewLM_060017200.1;Parent=LTnewLM_060017200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 467766 470280 . + . ID=LTnewLM_060017200.1:pseudogenic_exon:1;Parent=LTnewLM_060017200.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 467766 470280 . + . ID=LTnewLM_060017200.1:pep;Derives_from=LTnewLM_060017200.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 470726 472291 1 + . ID=LTnewLM_060017300 LTnewLM_6 AUGUSTUS mRNA 470726 472291 1 + . ID=LTnewLM_060017300.1;Parent=LTnewLM_060017300 LTnewLM_6 AUGUSTUS CDS 470726 472291 1 + 0 ID=LTnewLM_060017300.1:CDS:1;Parent=LTnewLM_060017300.1 ### LTnewLM_6 . polypeptide 470726 472291 . + . ID=LTnewLM_060017300.1:pep;Derives_from=LTnewLM_060017300.1;orthologous_to=LmjF.06.1150_mRNA;ortholog_cluster=OG0007078;product=term%3DProbable Zinc-ribbon domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14311 LTnewLM_6 Pfam protein_match 471107 471226 . + . Parent=LTnewLM_060017300.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_6 Pfam protein_match 471362 471520 . + . Parent=LTnewLM_060017300.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain LTnewLM_6 Pfam protein_match 471749 471874 . + . Parent=LTnewLM_060017300.1:pep;Name=PF14311;signature_desc=Probable Zinc-ribbon domain ### LTnewLM_6 . pseudogene 472836 476126 . + . ID=LTnewLM_060017400:pseudogene;coverage=0.996;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.1160_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 472836 476126 . + . ID=LTnewLM_060017400.1;Parent=LTnewLM_060017400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 472836 476126 . + . ID=LTnewLM_060017400.1:pseudogenic_exon:1;Parent=LTnewLM_060017400.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 472836 476126 . + . ID=LTnewLM_060017400.1:pep;Derives_from=LTnewLM_060017400.1;orthologous_to=LmjF.06.1160_mRNA;ortholog_cluster=OG0007720;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 476779 477186 1 + . ID=LTnewLM_060017500 LTnewLM_6 AUGUSTUS mRNA 476779 477186 1 + . ID=LTnewLM_060017500.1;Parent=LTnewLM_060017500 LTnewLM_6 AUGUSTUS CDS 476779 477186 1 + 0 ID=LTnewLM_060017500.1:CDS:1;Parent=LTnewLM_060017500.1 ### LTnewLM_6 . polypeptide 476779 477186 . + . ID=LTnewLM_060017500.1:pep;Derives_from=LTnewLM_060017500.1;orthologous_to=LmjF.06.1170_mRNA;ortholog_cluster=OG0007079;product=term%3DNuclear transport factor 2 (NTF2) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02136;Ontology_term=GO:0006810,GO:0005622 LTnewLM_6 Pfam protein_match 476815 477162 . + . Parent=LTnewLM_060017500.1:pep;Name=PF02136;signature_desc=Nuclear transport factor 2 (NTF2) domain;Ontology_term=GO:0006810,GO:0005622 ### LTnewLM_6 AUGUSTUS gene 478319 479686 1 + . ID=LTnewLM_060017600 LTnewLM_6 AUGUSTUS mRNA 478319 479686 1 + . ID=LTnewLM_060017600.1;Parent=LTnewLM_060017600 LTnewLM_6 AUGUSTUS CDS 478319 479686 1 + 0 ID=LTnewLM_060017600.1:CDS:1;Parent=LTnewLM_060017600.1 ### LTnewLM_6 . polypeptide 478319 479686 . + . ID=LTnewLM_060017600.1:pep;Derives_from=LTnewLM_060017600.1;orthologous_to=LmjF.06.1180_mRNA;ortholog_cluster=OG0007080;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_6 Pfam protein_match 478532 478993 . + . Parent=LTnewLM_060017600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_6 Pfam protein_match 478535 478990 . + . Parent=LTnewLM_060017600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_6 Pfam protein_match 479162 479461 . + . Parent=LTnewLM_060017600.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_6 Pfam protein_match 479186 479449 . + . Parent=LTnewLM_060017600.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_6 AUGUSTUS gene 480643 481086 1 + . ID=LTnewLM_060017700 LTnewLM_6 AUGUSTUS mRNA 480643 481086 1 + . ID=LTnewLM_060017700.1;Parent=LTnewLM_060017700 LTnewLM_6 AUGUSTUS CDS 480643 481086 1 + 0 ID=LTnewLM_060017700.1:CDS:1;Parent=LTnewLM_060017700.1 ### LTnewLM_6 . polypeptide 480643 481086 . + . ID=LTnewLM_060017700.1:pep;Derives_from=LTnewLM_060017700.1;orthologous_to=LmjF.06.1190_mRNA;ortholog_cluster=OG0007081;product=term%3DThioredoxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00085;Ontology_term=GO:0045454 LTnewLM_6 Pfam protein_match 480754 481065 . + . Parent=LTnewLM_060017700.1:pep;Name=PF00085;signature_desc=Thioredoxin;Ontology_term=GO:0045454 ### LTnewLM_6 AUGUSTUS gene 481719 482060 1 + . ID=LTnewLM_060017800 LTnewLM_6 AUGUSTUS mRNA 481719 482060 1 + . ID=LTnewLM_060017800.1;Parent=LTnewLM_060017800 LTnewLM_6 AUGUSTUS CDS 481719 482060 1 + 0 ID=LTnewLM_060017800.1:CDS:1;Parent=LTnewLM_060017800.1 ### LTnewLM_6 . polypeptide 481719 482060 . + . ID=LTnewLM_060017800.1:pep;Derives_from=LTnewLM_060017800.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 482274 482534 1 + . ID=LTnewLM_060017900 LTnewLM_6 AUGUSTUS mRNA 482274 482534 1 + . ID=LTnewLM_060017900.1;Parent=LTnewLM_060017900 LTnewLM_6 AUGUSTUS CDS 482274 482534 1 + 0 ID=LTnewLM_060017900.1:CDS:1;Parent=LTnewLM_060017900.1 ### LTnewLM_6 . polypeptide 482274 482534 . + . ID=LTnewLM_060017900.1:pep;Derives_from=LTnewLM_060017900.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 484310 485494 1 + . ID=LTnewLM_060018000 LTnewLM_6 AUGUSTUS mRNA 484310 485494 1 + . ID=LTnewLM_060018000.1;Parent=LTnewLM_060018000 LTnewLM_6 AUGUSTUS CDS 484310 485494 1 + 0 ID=LTnewLM_060018000.1:CDS:1;Parent=LTnewLM_060018000.1 ### LTnewLM_6 . polypeptide 484310 485494 . + . ID=LTnewLM_060018000.1:pep;Derives_from=LTnewLM_060018000.1;orthologous_to=LmjF.06.1200_mRNA;ortholog_cluster=OG0007082;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 486054 487820 1 + . ID=LTnewLM_060018100 LTnewLM_6 AUGUSTUS mRNA 486054 487820 1 + . ID=LTnewLM_060018100.1;Parent=LTnewLM_060018100 LTnewLM_6 AUGUSTUS CDS 486054 487820 1 + 0 ID=LTnewLM_060018100.1:CDS:1;Parent=LTnewLM_060018100.1 ### LTnewLM_6 . polypeptide 486054 487820 . + . ID=LTnewLM_060018100.1:pep;Derives_from=LTnewLM_060018100.1;orthologous_to=LmjF.06.1210_mRNA;ortholog_cluster=OG0007083;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 . pseudogene 489556 491927 . + . ID=LTnewLM_060018200:pseudogene;coverage=0.998;sequence_ID=0.916;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.06.1220_0;has_internal_stop=true LTnewLM_6 . pseudogenic_transcript 489556 491927 . + . ID=LTnewLM_060018200.1;Parent=LTnewLM_060018200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_6 . pseudogenic_exon 489556 491927 . + . ID=LTnewLM_060018200.1:pseudogenic_exon:1;Parent=LTnewLM_060018200.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 489556 491927 . + . ID=LTnewLM_060018200.1:pep;Derives_from=LTnewLM_060018200.1;orthologous_to=LmjF.06.1220_mRNA;ortholog_cluster=OG0007721;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 492953 493890 0.84 + . ID=LTnewLM_060018300 LTnewLM_6 AUGUSTUS mRNA 492953 493890 0.84 + . ID=LTnewLM_060018300.1;Parent=LTnewLM_060018300 LTnewLM_6 AUGUSTUS CDS 492953 492991 1 + 0 ID=LTnewLM_060018300.1:CDS:1;Parent=LTnewLM_060018300.1 LTnewLM_6 AUGUSTUS CDS 493090 493890 0.84 + 0 ID=LTnewLM_060018300.1:CDS:2;Parent=LTnewLM_060018300.1 ### LTnewLM_6 . polypeptide 492953 493890 . + . ID=LTnewLM_060018300.1:pep;Derives_from=LTnewLM_060018300.1;orthologous_to=LmjF.06.1230_mRNA;ortholog_cluster=OG0007084;product=term%3DPCO_ADO%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07847;Ontology_term=GO:0047800,GO:0055114 LTnewLM_6 Pfam protein_match 493040 493759 . + . Parent=LTnewLM_060018300.1:pep;Name=PF07847;signature_desc=PCO_ADO;Ontology_term=GO:0047800,GO:0055114 ### LTnewLM_6 AUGUSTUS gene 494665 496149 1 + . ID=LTnewLM_060018400 LTnewLM_6 AUGUSTUS mRNA 494665 496149 1 + . ID=LTnewLM_060018400.1;Parent=LTnewLM_060018400 LTnewLM_6 AUGUSTUS CDS 494665 496149 1 + 0 ID=LTnewLM_060018400.1:CDS:1;Parent=LTnewLM_060018400.1 ### LTnewLM_6 . polypeptide 494665 496149 . + . ID=LTnewLM_060018400.1:pep;Derives_from=LTnewLM_060018400.1;orthologous_to=LmjF.06.1240_mRNA;ortholog_cluster=OG0007085;product=term%3DFAD binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01494 LTnewLM_6 Pfam protein_match 495334 495888 . + . Parent=LTnewLM_060018400.1:pep;Name=PF01494;signature_desc=FAD binding domain ### LTnewLM_6 AUGUSTUS gene 497274 497645 1 + . ID=LTnewLM_060018500 LTnewLM_6 AUGUSTUS mRNA 497274 497645 1 + . ID=LTnewLM_060018500.1;Parent=LTnewLM_060018500 LTnewLM_6 AUGUSTUS CDS 497274 497645 1 + 0 ID=LTnewLM_060018500.1:CDS:1;Parent=LTnewLM_060018500.1 ### LTnewLM_6 . polypeptide 497274 497645 . + . ID=LTnewLM_060018500.1:pep;Derives_from=LTnewLM_060018500.1;orthologous_to=LmjF.06.1245_mRNA;ortholog_cluster=OG0007086;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 498345 499061 1 + . ID=LTnewLM_060018600 LTnewLM_6 AUGUSTUS mRNA 498345 499061 1 + . ID=LTnewLM_060018600.1;Parent=LTnewLM_060018600 LTnewLM_6 AUGUSTUS CDS 498345 499061 1 + 0 ID=LTnewLM_060018600.1:CDS:1;Parent=LTnewLM_060018600.1 ### LTnewLM_6 . polypeptide 498345 499061 . + . ID=LTnewLM_060018600.1:pep;Derives_from=LTnewLM_060018600.1;orthologous_to=LmjF.06.1250_mRNA;ortholog_cluster=OG0007087;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_6 AUGUSTUS gene 499809 500333 1 + . ID=LTnewLM_060018700 LTnewLM_6 AUGUSTUS mRNA 499809 500333 1 + . ID=LTnewLM_060018700.1;Parent=LTnewLM_060018700 LTnewLM_6 AUGUSTUS CDS 499809 500333 1 + 0 ID=LTnewLM_060018700.1:CDS:1;Parent=LTnewLM_060018700.1 ### LTnewLM_6 . polypeptide 499809 500333 . + . ID=LTnewLM_060018700.1:pep;Derives_from=LTnewLM_060018700.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 501820 503781 1 - . ID=LTnewLM_060018800 LTnewLM_6 AUGUSTUS mRNA 501820 503781 1 - . ID=LTnewLM_060018800.1;Parent=LTnewLM_060018800 LTnewLM_6 AUGUSTUS CDS 501820 503781 1 - 0 ID=LTnewLM_060018800.1:CDS:1;Parent=LTnewLM_060018800.1 ### LTnewLM_6 . polypeptide 501820 503781 . - . ID=LTnewLM_060018800.1:pep;Derives_from=LTnewLM_060018800.1;orthologous_to=LmjF.06.1260_mRNA;ortholog_cluster=OG0007088;product=term%3DBT1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03092;Ontology_term=GO:0006810,GO:0016021 LTnewLM_6 Pfam protein_match 501940 503559 . - . Parent=LTnewLM_060018800.1:pep;Name=PF03092;signature_desc=BT1 family;Ontology_term=GO:0006810,GO:0016021 ### LTnewLM_6 AUGUSTUS gene 505510 506415 1 - . ID=LTnewLM_060018900 LTnewLM_6 AUGUSTUS mRNA 505510 506415 1 - . ID=LTnewLM_060018900.1;Parent=LTnewLM_060018900 LTnewLM_6 AUGUSTUS CDS 505510 506415 1 - 0 ID=LTnewLM_060018900.1:CDS:1;Parent=LTnewLM_060018900.1 ### LTnewLM_6 . polypeptide 505510 506415 . - . ID=LTnewLM_060018900.1:pep;Derives_from=LTnewLM_060018900.1;orthologous_to=LmjF.06.1270_mRNA;ortholog_cluster=OG0007089;product=term%3DCoproporphyrinogen III oxidase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01218;Ontology_term=GO:0055114,GO:0006779,GO:0004109 LTnewLM_6 Pfam protein_match 505519 506394 . - . Parent=LTnewLM_060018900.1:pep;Name=PF01218;signature_desc=Coproporphyrinogen III oxidase;Ontology_term=GO:0004109,GO:0006779,GO:0055114 ### LTnewLM_6 Liftoff gene 507440 508136 . - . ID=LTnewLM_060019000;coverage=1.0;sequence_ID=0.923;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.06.1280_0 LTnewLM_6 Liftoff mRNA 507440 508136 . - . ID=LTnewLM_060019000.1;Parent=LTnewLM_060019000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_6 Liftoff CDS 507440 508136 . - 0 ID=LTnewLM_060019000.1:CDS:1;Parent=LTnewLM_060019000.1;extra_copy_number=0 ### LTnewLM_6 . polypeptide 507440 508136 . - . ID=LTnewLM_060019000.1:pep;Derives_from=LTnewLM_060019000.1;orthologous_to=LmjF.06.1280_mRNA;ortholog_cluster=OG0007090;product=term%3DFlavodoxin domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12724 LTnewLM_6 Pfam protein_match 507666 508112 . - . Parent=LTnewLM_060019000.1:pep;Name=PF12724;signature_desc=Flavodoxin domain ### LTnewLM_6 AUGUSTUS gene 509329 509700 1 - . ID=LTnewLM_060019100 LTnewLM_6 AUGUSTUS mRNA 509329 509700 1 - . ID=LTnewLM_060019100.1;Parent=LTnewLM_060019100 LTnewLM_6 AUGUSTUS CDS 509329 509700 1 - 0 ID=LTnewLM_060019100.1:CDS:1;Parent=LTnewLM_060019100.1 ### LTnewLM_6 . polypeptide 509329 509700 . - . ID=LTnewLM_060019100.1:pep;Derives_from=LTnewLM_060019100.1;orthologous_to=LTnewLM_220005100.1,LmjF.06.1290_mRNA;ortholog_cluster=OG0000381;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_6 Pfam protein_match 509512 509676 . - . Parent=LTnewLM_060019100.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_6 AUGUSTUS gene 514478 516405 0.71 + . ID=LTnewLM_060019200 LTnewLM_6 AUGUSTUS mRNA 514478 516405 0.71 + . ID=LTnewLM_060019200.1;Parent=LTnewLM_060019200 LTnewLM_6 AUGUSTUS CDS 514478 516015 1 + 0 ID=LTnewLM_060019200.1:CDS:1;Parent=LTnewLM_060019200.1 LTnewLM_6 AUGUSTUS CDS 516087 516405 0.71 + 1 ID=LTnewLM_060019200.1:CDS:2;Parent=LTnewLM_060019200.1 ### LTnewLM_6 . polypeptide 514478 516405 . + . ID=LTnewLM_060019200.1:pep;Derives_from=LTnewLM_060019200.1;orthologous_to=LTnewLM_040009600.1,LTnewLM_220005000.1,LmjF.06.1300_mRNA,LmjF.22.0010_mRNA;ortholog_cluster=OG0000099;product=term%3DCLN3 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02487;Ontology_term=GO:0016020 LTnewLM_6 Pfam protein_match 514703 515983 . + . Parent=LTnewLM_060019200.1:pep;Name=PF02487;signature_desc=CLN3 protein;Ontology_term=GO:0016020 ### LTnewLM_6 . polypeptide 518884 519015 . - . ID=LTnewLM_060019300.1:pep;Derives_from=LTnewLM_060019300.1;product=term%3Dhypothetical protein ### LTnewLM_6 AUGUSTUS gene 518884 519251 0.85 - . ID=LTnewLM_060019300;fiveEndPartial=true;End_range=.,. LTnewLM_6 AUGUSTUS mRNA 518884 519251 0.85 - . ID=LTnewLM_060019300.1;Parent=LTnewLM_060019300 LTnewLM_6 AUGUSTUS CDS 518884 519015 0.85 - 0 ID=LTnewLM_060019300.1:CDS:1;Parent=LTnewLM_060019300.1 ### LTnewLM_7 . contig 1 595713 . + . Name=LTnewLM_CTG000041 LTnewLM_7 AUGUSTUS gene 2461 4638 1 - . ID=LTnewLM_070005000 LTnewLM_7 AUGUSTUS mRNA 2461 4638 1 - . ID=LTnewLM_070005000.1;Parent=LTnewLM_070005000 LTnewLM_7 AUGUSTUS CDS 2461 4638 1 - 0 ID=LTnewLM_070005000.1:CDS:1;Parent=LTnewLM_070005000.1 ### LTnewLM_7 . polypeptide 2461 4638 . - . ID=LTnewLM_070005000.1:pep;Derives_from=LTnewLM_070005000.1;orthologous_to=LmjF.07.0010_mRNA;ortholog_cluster=OG0007091;product=term%3DUbiquitin-like modifier-activating enzyme ATG7 N-terminus/ThiF family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16420|Pfam:PF00899;Ontology_term=GO:0008641 LTnewLM_7 Pfam protein_match 2797 3525 . - . Parent=LTnewLM_070005000.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 LTnewLM_7 Pfam protein_match 3601 4611 . - . Parent=LTnewLM_070005000.1:pep;Name=PF16420;signature_desc=Ubiquitin-like modifier-activating enzyme ATG7 N-terminus ### LTnewLM_7 AUGUSTUS gene 9836 10645 1 + . ID=LTnewLM_070005100 LTnewLM_7 AUGUSTUS mRNA 9836 10645 1 + . ID=LTnewLM_070005100.1;Parent=LTnewLM_070005100 LTnewLM_7 AUGUSTUS CDS 9836 10645 1 + 0 ID=LTnewLM_070005100.1:CDS:1;Parent=LTnewLM_070005100.1 ### LTnewLM_7 . polypeptide 9836 10645 . + . ID=LTnewLM_070005100.1:pep;Derives_from=LTnewLM_070005100.1;orthologous_to=LmjF.07.0020_mRNA;ortholog_cluster=OG0007092;product=term%3DIsy1-like splicing family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06246 LTnewLM_7 Pfam protein_match 9872 10615 . + . Parent=LTnewLM_070005100.1:pep;Name=PF06246;signature_desc=Isy1-like splicing family ### LTnewLM_7 AUGUSTUS gene 11231 12130 1 + . ID=LTnewLM_070005200 LTnewLM_7 AUGUSTUS mRNA 11231 12130 1 + . ID=LTnewLM_070005200.1;Parent=LTnewLM_070005200 LTnewLM_7 AUGUSTUS CDS 11231 12130 1 + 0 ID=LTnewLM_070005200.1:CDS:1;Parent=LTnewLM_070005200.1 ### LTnewLM_7 . polypeptide 11231 12130 . + . ID=LTnewLM_070005200.1:pep;Derives_from=LTnewLM_070005200.1;orthologous_to=LmjF.07.0025_mRNA;ortholog_cluster=OG0007093;product=term%3DHistone methylation protein DOT1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08123;Ontology_term=GO:0018024 LTnewLM_7 Pfam protein_match 11576 12118 . + . Parent=LTnewLM_070005200.1:pep;Name=PF08123;signature_desc=Histone methylation protein DOT1;Ontology_term=GO:0018024 ### LTnewLM_7 Liftoff gene 13478 14287 . + . ID=LTnewLM_070005300;coverage=0.972;sequence_ID=0.864;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0030_0 LTnewLM_7 Liftoff mRNA 13478 14287 . + . ID=LTnewLM_070005300.1;Parent=LTnewLM_070005300;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_7 Liftoff CDS 13478 14287 . + 0 ID=LTnewLM_070005300.1:CDS:1;Parent=LTnewLM_070005300.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 13478 14287 . + . ID=LTnewLM_070005300.1:pep;Derives_from=LTnewLM_070005300.1;orthologous_to=LmjF.07.0030_mRNA;ortholog_cluster=OG0007094;product=term%3DPeptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07687 LTnewLM_7 Pfam protein_match 13652 13936 . + . Parent=LTnewLM_070005300.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_7 AUGUSTUS gene 14916 15860 1 + . ID=LTnewLM_070005400 LTnewLM_7 AUGUSTUS mRNA 14916 15860 1 + . ID=LTnewLM_070005400.1;Parent=LTnewLM_070005400 LTnewLM_7 AUGUSTUS CDS 14916 15860 1 + 0 ID=LTnewLM_070005400.1:CDS:1;Parent=LTnewLM_070005400.1 ### LTnewLM_7 . polypeptide 14916 15860 . + . ID=LTnewLM_070005400.1:pep;Derives_from=LTnewLM_070005400.1;orthologous_to=LmjF.07.0040_mRNA;ortholog_cluster=OG0007095;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 16459 19344 1 + . ID=LTnewLM_070005500 LTnewLM_7 AUGUSTUS mRNA 16459 19344 1 + . ID=LTnewLM_070005500.1;Parent=LTnewLM_070005500 LTnewLM_7 AUGUSTUS CDS 16459 19344 1 + 0 ID=LTnewLM_070005500.1:CDS:1;Parent=LTnewLM_070005500.1 ### LTnewLM_7 . polypeptide 16459 19344 . + . ID=LTnewLM_070005500.1:pep;Derives_from=LTnewLM_070005500.1;orthologous_to=LmjF.07.0050_mRNA;ortholog_cluster=OG0007096;product=term%3DAdaptin N terminal region containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_7 Pfam protein_match 16528 18240 . + . Parent=LTnewLM_070005500.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 ### LTnewLM_7 AUGUSTUS gene 21090 21866 1 + . ID=LTnewLM_070005600 LTnewLM_7 AUGUSTUS mRNA 21090 21866 1 + . ID=LTnewLM_070005600.1;Parent=LTnewLM_070005600 LTnewLM_7 AUGUSTUS CDS 21090 21866 1 + 0 ID=LTnewLM_070005600.1:CDS:1;Parent=LTnewLM_070005600.1 ### LTnewLM_7 . polypeptide 21090 21866 . + . ID=LTnewLM_070005600.1:pep;Derives_from=LTnewLM_070005600.1;orthologous_to=LmjF.07.0060_mRNA;ortholog_cluster=OG0007097;product=term%3DCytochrome C1 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02167;Ontology_term=GO:0005506,GO:0020037,GO:0009055 LTnewLM_7 Pfam protein_match 21153 21806 . + . Parent=LTnewLM_070005600.1:pep;Name=PF02167;signature_desc=Cytochrome C1 family;Ontology_term=GO:0005506,GO:0009055,GO:0020037 ### LTnewLM_7 AUGUSTUS gene 22900 23478 1 + . ID=LTnewLM_070005700 LTnewLM_7 AUGUSTUS mRNA 22900 23478 1 + . ID=LTnewLM_070005700.1;Parent=LTnewLM_070005700 LTnewLM_7 AUGUSTUS CDS 22900 23478 1 + 0 ID=LTnewLM_070005700.1:CDS:1;Parent=LTnewLM_070005700.1 ### LTnewLM_7 . polypeptide 22900 23478 . + . ID=LTnewLM_070005700.1:pep;Derives_from=LTnewLM_070005700.1;orthologous_to=LmjF.07.0070_mRNA;ortholog_cluster=OG0007098;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 24444 26318 1 + . ID=LTnewLM_070005800 LTnewLM_7 AUGUSTUS mRNA 24444 26318 1 + . ID=LTnewLM_070005800.1;Parent=LTnewLM_070005800 LTnewLM_7 AUGUSTUS CDS 24444 26318 1 + 0 ID=LTnewLM_070005800.1:CDS:1;Parent=LTnewLM_070005800.1 ### LTnewLM_7 . polypeptide 24444 26318 . + . ID=LTnewLM_070005800.1:pep;Derives_from=LTnewLM_070005800.1;orthologous_to=LmjF.07.0080_mRNA;ortholog_cluster=OG0007099;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 27880 31638 1 + . ID=LTnewLM_070005900 LTnewLM_7 AUGUSTUS mRNA 27880 31638 1 + . ID=LTnewLM_070005900.1;Parent=LTnewLM_070005900 LTnewLM_7 AUGUSTUS CDS 27880 31638 1 + 0 ID=LTnewLM_070005900.1:CDS:1;Parent=LTnewLM_070005900.1 ### LTnewLM_7 . polypeptide 27880 31638 . + . ID=LTnewLM_070005900.1:pep;Derives_from=LTnewLM_070005900.1;orthologous_to=LmjF.07.0090_mRNA;ortholog_cluster=OG0007100;product=term%3DHomocysteine S-methyltransferase/Pterin binding enzyme/B12 binding domain/Vitamin B12 dependent methionine synthase%2C activation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02574|Pfam:PF00809|Pfam:PF02607|Pfam:PF02310|Pfam:PF02965;Ontology_term=GO:0042558,GO:0005622,GO:0008705,GO:0046872,GO:0009086,GO:0008898,GO:0031419 LTnewLM_7 Pfam protein_match 27949 28872 . + . Parent=LTnewLM_070005900.1:pep;Name=PF02574;signature_desc=Homocysteine S-methyltransferase;Ontology_term=GO:0008898 LTnewLM_7 Pfam protein_match 28978 29691 . + . Parent=LTnewLM_070005900.1:pep;Name=PF00809;signature_desc=Pterin binding enzyme;Ontology_term=GO:0042558 LTnewLM_7 Pfam protein_match 29890 30114 . + . Parent=LTnewLM_070005900.1:pep;Name=PF02607;signature_desc=B12 binding domain;Ontology_term=GO:0008705,GO:0031419,GO:0046872,GO:0009086 LTnewLM_7 Pfam protein_match 30190 30462 . + . Parent=LTnewLM_070005900.1:pep;Name=PF02310;signature_desc=B12 binding domain;Ontology_term=GO:0031419,GO:0046872 LTnewLM_7 Pfam protein_match 30760 31581 . + . Parent=LTnewLM_070005900.1:pep;Name=PF02965;signature_desc=Vitamin B12 dependent methionine synthase%2C activation domain;Ontology_term=GO:0008705,GO:0009086,GO:0005622 ### LTnewLM_7 AUGUSTUS gene 33721 36819 1 + . ID=LTnewLM_070006000 LTnewLM_7 AUGUSTUS mRNA 33721 36819 1 + . ID=LTnewLM_070006000.1;Parent=LTnewLM_070006000 LTnewLM_7 AUGUSTUS CDS 33721 36819 1 + 0 ID=LTnewLM_070006000.1:CDS:1;Parent=LTnewLM_070006000.1 ### LTnewLM_7 . polypeptide 33721 36819 . + . ID=LTnewLM_070006000.1:pep;Derives_from=LTnewLM_070006000.1;orthologous_to=LmjF.07.0100_mRNA;ortholog_cluster=OG0007101;product=term%3DInsulinase (Peptidase family M16)/Peptidase M16 inactive domain/Peptidase M16C associated%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00675|Pfam:PF05193|Pfam:PF08367;Ontology_term=GO:0006508 LTnewLM_7 Pfam protein_match 33919 34248 . + . Parent=LTnewLM_070006000.1:pep;Name=PF00675;signature_desc=Insulinase (Peptidase family M16) LTnewLM_7 Pfam protein_match 34420 34977 . + . Parent=LTnewLM_070006000.1:pep;Name=PF05193;signature_desc=Peptidase M16 inactive domain LTnewLM_7 Pfam protein_match 35212 35979 . + . Parent=LTnewLM_070006000.1:pep;Name=PF08367;signature_desc=Peptidase M16C associated;Ontology_term=GO:0006508 ### LTnewLM_7 . polypeptide 37761 38033 . + . ID=LTnewLM_070006100.1:pep;Derives_from=LTnewLM_070006100.1;orthologous_to=LTnewLM_070006100.2,LTnewLM_070006100.3;ortholog_cluster=OG0000491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 37761 38518 2.2 + . ID=LTnewLM_070006100 LTnewLM_7 AUGUSTUS mRNA 37761 38033 1 + . ID=LTnewLM_070006100.1;Parent=LTnewLM_070006100 LTnewLM_7 AUGUSTUS CDS 37761 38033 1 + 0 ID=LTnewLM_070006100.1:CDS:1;Parent=LTnewLM_070006100.1 LTnewLM_7 AUGUSTUS mRNA 37761 38518 0.2 + . ID=LTnewLM_070006100.2;Parent=LTnewLM_070006100 LTnewLM_7 AUGUSTUS CDS 37761 37945 0.24 + 0 ID=LTnewLM_070006100.2:CDS:1;Parent=LTnewLM_070006100.2 LTnewLM_7 AUGUSTUS CDS 38074 38518 0.6 + 1 ID=LTnewLM_070006100.2:CDS:2;Parent=LTnewLM_070006100.2 LTnewLM_7 AUGUSTUS mRNA 38228 38518 1 + . ID=LTnewLM_070006100.3;Parent=LTnewLM_070006100 LTnewLM_7 AUGUSTUS CDS 38228 38518 1 + 0 ID=LTnewLM_070006100.3:CDS:1;Parent=LTnewLM_070006100.3 ### LTnewLM_7 . polypeptide 37761 38518 . + . ID=LTnewLM_070006100.2:pep;Derives_from=LTnewLM_070006100.2;orthologous_to=LTnewLM_070006100.1,LTnewLM_070006100.3;ortholog_cluster=OG0000491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . polypeptide 38228 38518 . + . ID=LTnewLM_070006100.3:pep;Derives_from=LTnewLM_070006100.3;orthologous_to=LTnewLM_070006100.1,LTnewLM_070006100.2;ortholog_cluster=OG0000491;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 39473 40822 1 + . ID=LTnewLM_070006200 LTnewLM_7 AUGUSTUS mRNA 39473 40822 1 + . ID=LTnewLM_070006200.1;Parent=LTnewLM_070006200 LTnewLM_7 AUGUSTUS CDS 39473 40822 1 + 0 ID=LTnewLM_070006200.1:CDS:1;Parent=LTnewLM_070006200.1 ### LTnewLM_7 . polypeptide 39473 40822 . + . ID=LTnewLM_070006200.1:pep;Derives_from=LTnewLM_070006200.1;orthologous_to=LmjF.07.0110_mRNA;ortholog_cluster=OG0007102;product=term%3DEF-hand domain pair/EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF00036|Pfam:PF13202|Pfam:PF13499;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 39980 40057 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 39983 40063 . + . Parent=LTnewLM_070006200.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 39986 40057 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 40082 40159 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 40319 40711 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 40562 40714 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 40646 40699 . + . Parent=LTnewLM_070006200.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_7 AUGUSTUS gene 42194 48868 1 + . ID=LTnewLM_070006300 LTnewLM_7 AUGUSTUS mRNA 42194 48868 1 + . ID=LTnewLM_070006300.1;Parent=LTnewLM_070006300 LTnewLM_7 AUGUSTUS CDS 42194 48868 1 + 0 ID=LTnewLM_070006300.1:CDS:1;Parent=LTnewLM_070006300.1 ### LTnewLM_7 . polypeptide 42194 48868 . + . ID=LTnewLM_070006300.1:pep;Derives_from=LTnewLM_070006300.1;orthologous_to=LmjF.07.0120_mRNA;ortholog_cluster=OG0007103;product=term%3DSec7 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01369;Ontology_term=GO:0005086,GO:0032012 LTnewLM_7 Pfam protein_match 44462 45100 . + . Parent=LTnewLM_070006300.1:pep;Name=PF01369;signature_desc=Sec7 domain;Ontology_term=GO:0005086,GO:0032012 ### LTnewLM_7 AUGUSTUS gene 49635 51482 1 + . ID=LTnewLM_070006400 LTnewLM_7 AUGUSTUS mRNA 49635 51482 1 + . ID=LTnewLM_070006400.1;Parent=LTnewLM_070006400 LTnewLM_7 AUGUSTUS CDS 49635 51482 1 + 0 ID=LTnewLM_070006400.1:CDS:1;Parent=LTnewLM_070006400.1 ### LTnewLM_7 . polypeptide 49635 51482 . + . ID=LTnewLM_070006400.1:pep;Derives_from=LTnewLM_070006400.1;orthologous_to=LmjF.07.0130_mRNA;ortholog_cluster=OG0007104;product=term%3DtRNA methyl transferase HUP domain/Aminomethyltransferase beta-barrel domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03054|Pfam:PF20258;Ontology_term=GO:0008033,GO:0016740 LTnewLM_7 Pfam protein_match 49908 50453 . + . Parent=LTnewLM_070006400.1:pep;Name=PF03054;signature_desc=tRNA methyl transferase HUP domain;Ontology_term=GO:0016740,GO:0008033 LTnewLM_7 Pfam protein_match 51138 51305 . + . Parent=LTnewLM_070006400.1:pep;Name=PF20258;signature_desc=Aminomethyltransferase beta-barrel domain ### LTnewLM_7 AUGUSTUS gene 52032 53090 1 + . ID=LTnewLM_070006500 LTnewLM_7 AUGUSTUS mRNA 52032 53090 1 + . ID=LTnewLM_070006500.1;Parent=LTnewLM_070006500 LTnewLM_7 AUGUSTUS CDS 52032 53090 1 + 0 ID=LTnewLM_070006500.1:CDS:1;Parent=LTnewLM_070006500.1 ### LTnewLM_7 . polypeptide 52032 53090 . + . ID=LTnewLM_070006500.1:pep;Derives_from=LTnewLM_070006500.1;orthologous_to=LmjF.07.0140_mRNA;ortholog_cluster=OG0007105;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 Aragorn_1.2.36 gene 52961 53056 . - . ID=LTnewLM_070006600 LTnewLM_7 Aragorn_1.2.36 tRNA 52961 53056 . - . ID=LTnewLM_070006600:tRNA;Parent=LTnewLM_070006600;aa=Phe;anticodon=gaa;gc_content=66.7 ### LTnewLM_7 AUGUSTUS gene 53913 55766 1 + . ID=LTnewLM_070006700 LTnewLM_7 AUGUSTUS mRNA 53913 55766 1 + . ID=LTnewLM_070006700.1;Parent=LTnewLM_070006700 LTnewLM_7 AUGUSTUS CDS 53913 55766 1 + 0 ID=LTnewLM_070006700.1:CDS:1;Parent=LTnewLM_070006700.1 ### LTnewLM_7 . polypeptide 53913 55766 . + . ID=LTnewLM_070006700.1:pep;Derives_from=LTnewLM_070006700.1;orthologous_to=LmjF.07.0150_mRNA;ortholog_cluster=OG0007106;product=term%3DEukaryotic membrane protein family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05346 LTnewLM_7 Pfam protein_match 54288 55388 . + . Parent=LTnewLM_070006700.1:pep;Name=PF05346;signature_desc=Eukaryotic membrane protein family ### LTnewLM_7 AUGUSTUS gene 56429 56698 1 + . ID=LTnewLM_070006800 LTnewLM_7 AUGUSTUS mRNA 56429 56698 1 + . ID=LTnewLM_070006800.1;Parent=LTnewLM_070006800 LTnewLM_7 AUGUSTUS CDS 56429 56698 1 + 0 ID=LTnewLM_070006800.1:CDS:1;Parent=LTnewLM_070006800.1 ### LTnewLM_7 . polypeptide 56429 56698 . + . ID=LTnewLM_070006800.1:pep;Derives_from=LTnewLM_070006800.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 59186 59401 0.55 + . ID=LTnewLM_070006900 LTnewLM_7 AUGUSTUS mRNA 59186 59401 0.55 + . ID=LTnewLM_070006900.1;Parent=LTnewLM_070006900 LTnewLM_7 AUGUSTUS CDS 59186 59401 0.55 + 0 ID=LTnewLM_070006900.1:CDS:1;Parent=LTnewLM_070006900.1 ### LTnewLM_7 . polypeptide 59186 59401 . + . ID=LTnewLM_070006900.1:pep;Derives_from=LTnewLM_070006900.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 59429 59629 0.55 + . ID=LTnewLM_070007000 LTnewLM_7 AUGUSTUS mRNA 59429 59629 0.55 + . ID=LTnewLM_070007000.1;Parent=LTnewLM_070007000 LTnewLM_7 AUGUSTUS CDS 59429 59629 0.55 + 0 ID=LTnewLM_070007000.1:CDS:1;Parent=LTnewLM_070007000.1 ### LTnewLM_7 . polypeptide 59429 59629 . + . ID=LTnewLM_070007000.1:pep;Derives_from=LTnewLM_070007000.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 60157 62700 1 - . ID=LTnewLM_070007100 LTnewLM_7 AUGUSTUS mRNA 60157 62700 1 - . ID=LTnewLM_070007100.1;Parent=LTnewLM_070007100 LTnewLM_7 AUGUSTUS CDS 60157 62700 1 - 0 ID=LTnewLM_070007100.1:CDS:1;Parent=LTnewLM_070007100.1 ### LTnewLM_7 . polypeptide 60157 62700 . - . ID=LTnewLM_070007100.1:pep;Derives_from=LTnewLM_070007100.1;orthologous_to=LmjF.07.0160_mRNA;ortholog_cluster=OG0007107;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069|Pfam:PF14531;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 61954 62613 . - . Parent=LTnewLM_070007100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 61963 62634 . - . Parent=LTnewLM_070007100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_7 Pfam protein_match 61990 62433 . - . Parent=LTnewLM_070007100.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_7 AUGUSTUS gene 66166 67367 0.53 - . ID=LTnewLM_070007200 LTnewLM_7 AUGUSTUS mRNA 66166 67367 0.53 - . ID=LTnewLM_070007200.1;Parent=LTnewLM_070007200 LTnewLM_7 AUGUSTUS CDS 66166 66264 0.77 - 0 ID=LTnewLM_070007200.1:CDS:1;Parent=LTnewLM_070007200.1 LTnewLM_7 AUGUSTUS CDS 67074 67367 0.59 - 0 ID=LTnewLM_070007200.1:CDS:2;Parent=LTnewLM_070007200.1 ### LTnewLM_7 . polypeptide 66166 67367 . - . ID=LTnewLM_070007200.1:pep;Derives_from=LTnewLM_070007200.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 67920 71114 1 - . ID=LTnewLM_070007300 LTnewLM_7 AUGUSTUS mRNA 67920 71114 1 - . ID=LTnewLM_070007300.1;Parent=LTnewLM_070007300 LTnewLM_7 AUGUSTUS CDS 67920 71114 1 - 0 ID=LTnewLM_070007300.1:CDS:1;Parent=LTnewLM_070007300.1 ### LTnewLM_7 . polypeptide 67920 71114 . - . ID=LTnewLM_070007300.1:pep;Derives_from=LTnewLM_070007300.1;orthologous_to=LmjF.07.0170_mRNA;ortholog_cluster=OG0007108;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_7 Pfam protein_match 69879 70163 . - . Parent=LTnewLM_070007300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 69888 70145 . - . Parent=LTnewLM_070007300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_7 Pfam protein_match 70569 71033 . - . Parent=LTnewLM_070007300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 70575 71027 . - . Parent=LTnewLM_070007300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_7 AUGUSTUS gene 71885 78238 1 - . ID=LTnewLM_070007400 LTnewLM_7 AUGUSTUS mRNA 71885 78238 1 - . ID=LTnewLM_070007400.1;Parent=LTnewLM_070007400 LTnewLM_7 AUGUSTUS CDS 71885 78238 1 - 0 ID=LTnewLM_070007400.1:CDS:1;Parent=LTnewLM_070007400.1 ### LTnewLM_7 . polypeptide 71885 78238 . - . ID=LTnewLM_070007400.1:pep;Derives_from=LTnewLM_070007400.1;orthologous_to=LmjF.07.0180_mRNA;ortholog_cluster=OG0007109;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 80410 81591 1 - . ID=LTnewLM_070007500 LTnewLM_7 AUGUSTUS mRNA 80410 81591 1 - . ID=LTnewLM_070007500.1;Parent=LTnewLM_070007500 LTnewLM_7 AUGUSTUS CDS 80410 81591 1 - 0 ID=LTnewLM_070007500.1:CDS:1;Parent=LTnewLM_070007500.1 ### LTnewLM_7 . polypeptide 80410 81591 . - . ID=LTnewLM_070007500.1:pep;Derives_from=LTnewLM_070007500.1;orthologous_to=LmjF.07.0190_mRNA;ortholog_cluster=OG0007110;product=term%3DPhosphotyrosyl phosphate activator (PTPA) protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03095;Ontology_term=GO:0019211 LTnewLM_7 Pfam protein_match 80431 81486 . - . Parent=LTnewLM_070007500.1:pep;Name=PF03095;signature_desc=Phosphotyrosyl phosphate activator (PTPA) protein;Ontology_term=GO:0019211 ### LTnewLM_7 AUGUSTUS gene 82792 85059 1 - . ID=LTnewLM_070007600 LTnewLM_7 AUGUSTUS mRNA 82792 85059 1 - . ID=LTnewLM_070007600.1;Parent=LTnewLM_070007600 LTnewLM_7 AUGUSTUS CDS 82792 85059 1 - 0 ID=LTnewLM_070007600.1:CDS:1;Parent=LTnewLM_070007600.1 ### LTnewLM_7 . polypeptide 82792 85059 . - . ID=LTnewLM_070007600.1:pep;Derives_from=LTnewLM_070007600.1;orthologous_to=LmjF.07.0200_mRNA;ortholog_cluster=OG0007111;product=term%3DPhospholipase D Active site motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00614;Ontology_term=GO:0003824,GO:0008152 LTnewLM_7 Pfam protein_match 84073 84150 . - . Parent=LTnewLM_070007600.1:pep;Name=PF00614;signature_desc=Phospholipase D Active site motif;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_7 AUGUSTUS gene 85611 86372 1 - . ID=LTnewLM_070007700 LTnewLM_7 AUGUSTUS mRNA 85611 86372 1 - . ID=LTnewLM_070007700.1;Parent=LTnewLM_070007700 LTnewLM_7 AUGUSTUS CDS 85611 86372 1 - 0 ID=LTnewLM_070007700.1:CDS:1;Parent=LTnewLM_070007700.1 ### LTnewLM_7 . polypeptide 85611 86372 . - . ID=LTnewLM_070007700.1:pep;Derives_from=LTnewLM_070007700.1;orthologous_to=LmjF.07.0210_mRNA;ortholog_cluster=OG0007112;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 87301 89208 1 - . ID=LTnewLM_070007800 LTnewLM_7 AUGUSTUS mRNA 87301 89208 1 - . ID=LTnewLM_070007800.1;Parent=LTnewLM_070007800 LTnewLM_7 AUGUSTUS CDS 87301 89208 1 - 0 ID=LTnewLM_070007800.1:CDS:1;Parent=LTnewLM_070007800.1 ### LTnewLM_7 . polypeptide 87301 89208 . - . ID=LTnewLM_070007800.1:pep;Derives_from=LTnewLM_070007800.1;orthologous_to=LmjF.07.0220_mRNA;ortholog_cluster=OG0007113;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 89885 90244 1 - . ID=LTnewLM_070007900 LTnewLM_7 AUGUSTUS mRNA 89885 90244 1 - . ID=LTnewLM_070007900.1;Parent=LTnewLM_070007900 LTnewLM_7 AUGUSTUS CDS 89885 90244 1 - 0 ID=LTnewLM_070007900.1:CDS:1;Parent=LTnewLM_070007900.1 ### LTnewLM_7 . polypeptide 89885 90244 . - . ID=LTnewLM_070007900.1:pep;Derives_from=LTnewLM_070007900.1;orthologous_to=LmjF.07.0230_mRNA;ortholog_cluster=OG0007114;product=term%3DCytokine-induced anti-apoptosis inhibitor 1%2C Fe-S biogenesis%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05093;Ontology_term=GO:0051536,GO:0005737,GO:0016226 LTnewLM_7 Pfam protein_match 89927 90013 . - . Parent=LTnewLM_070007900.1:pep;Name=PF05093;signature_desc=Cytokine-induced anti-apoptosis inhibitor 1%2C Fe-S biogenesis;Ontology_term=GO:0051536,GO:0016226,GO:0005737 ### LTnewLM_7 AUGUSTUS gene 90913 92736 1 - . ID=LTnewLM_070008000 LTnewLM_7 AUGUSTUS mRNA 90913 92736 1 - . ID=LTnewLM_070008000.1;Parent=LTnewLM_070008000 LTnewLM_7 AUGUSTUS CDS 90913 92736 1 - 0 ID=LTnewLM_070008000.1:CDS:1;Parent=LTnewLM_070008000.1 ### LTnewLM_7 . polypeptide 90913 92736 . - . ID=LTnewLM_070008000.1:pep;Derives_from=LTnewLM_070008000.1;orthologous_to=LmjF.07.0240_mRNA;ortholog_cluster=OG0007115;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 93998 99598 1 - . ID=LTnewLM_070008100 LTnewLM_7 AUGUSTUS mRNA 93998 99598 1 - . ID=LTnewLM_070008100.1;Parent=LTnewLM_070008100 LTnewLM_7 AUGUSTUS CDS 93998 99598 1 - 0 ID=LTnewLM_070008100.1:CDS:1;Parent=LTnewLM_070008100.1 ### LTnewLM_7 . polypeptide 93998 99598 . - . ID=LTnewLM_070008100.1:pep;Derives_from=LTnewLM_070008100.1;orthologous_to=LmjF.07.0250_mRNA;ortholog_cluster=OG0007116;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 94145 94471 . - . Parent=LTnewLM_070008100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 94865 95038 . - . Parent=LTnewLM_070008100.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 94871 95752 . - . Parent=LTnewLM_070008100.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_7 AUGUSTUS gene 102259 103359 1 - . ID=LTnewLM_070008200 LTnewLM_7 AUGUSTUS mRNA 102259 103359 1 - . ID=LTnewLM_070008200.1;Parent=LTnewLM_070008200 LTnewLM_7 AUGUSTUS CDS 102259 103359 1 - 0 ID=LTnewLM_070008200.1:CDS:1;Parent=LTnewLM_070008200.1 ### LTnewLM_7 . polypeptide 102259 103359 . - . ID=LTnewLM_070008200.1:pep;Derives_from=LTnewLM_070008200.1;orthologous_to=LmjF.07.0260_mRNA;ortholog_cluster=OG0007117;product=term%3DHomoserine dehydrogenase%2C NAD binding domain/Homoserine dehydrogenase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03447|Pfam:PF00742;Ontology_term=GO:0055114,GO:0016491,GO:0006520,GO:0050661 LTnewLM_7 Pfam protein_match 102298 102906 . - . Parent=LTnewLM_070008200.1:pep;Name=PF00742;signature_desc=Homoserine dehydrogenase;Ontology_term=GO:0006520,GO:0055114 LTnewLM_7 Pfam protein_match 102985 103332 . - . Parent=LTnewLM_070008200.1:pep;Name=PF03447;signature_desc=Homoserine dehydrogenase%2C NAD binding domain;Ontology_term=GO:0016491,GO:0050661,GO:0055114 ### LTnewLM_7 AUGUSTUS gene 105636 106829 1 - . ID=LTnewLM_070008300 LTnewLM_7 AUGUSTUS mRNA 105636 106829 1 - . ID=LTnewLM_070008300.1;Parent=LTnewLM_070008300 LTnewLM_7 AUGUSTUS CDS 105636 106829 1 - 0 ID=LTnewLM_070008300.1:CDS:1;Parent=LTnewLM_070008300.1 ### LTnewLM_7 . polypeptide 105636 106829 . - . ID=LTnewLM_070008300.1:pep;Derives_from=LTnewLM_070008300.1;orthologous_to=LmjF.07.0270_mRNA;ortholog_cluster=OG0007118;product=term%3DPeptidase family M20/M25/M40/Peptidase dimerisation domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01546|Pfam:PF07687;Ontology_term=GO:0016787,GO:0008152 LTnewLM_7 Pfam protein_match 105675 106613 . - . Parent=LTnewLM_070008300.1:pep;Name=PF01546;signature_desc=Peptidase family M20/M25/M40;Ontology_term=GO:0016787,GO:0008152 LTnewLM_7 Pfam protein_match 105969 106301 . - . Parent=LTnewLM_070008300.1:pep;Name=PF07687;signature_desc=Peptidase dimerisation domain ### LTnewLM_7 . polypeptide 107392 108624 . - . ID=LTnewLM_070008400.1:pep;Derives_from=LTnewLM_070008400.1;orthologous_to=LTnewLM_070008400.2,LmjF.07.0280_mRNA;ortholog_cluster=OG0000492;product=term%3DHECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00632;Ontology_term=GO:0004842 LTnewLM_7 Pfam protein_match 107401 108312 . - . Parent=LTnewLM_070008400.1:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 ### LTnewLM_7 AUGUSTUS gene 107392 126150 1.28 - . ID=LTnewLM_070008400 LTnewLM_7 AUGUSTUS mRNA 107392 108624 1 - . ID=LTnewLM_070008400.1;Parent=LTnewLM_070008400 LTnewLM_7 AUGUSTUS CDS 107392 108624 1 - 0 ID=LTnewLM_070008400.1:CDS:1;Parent=LTnewLM_070008400.1 LTnewLM_7 AUGUSTUS mRNA 107392 126150 0.28 - . ID=LTnewLM_070008400.2;Parent=LTnewLM_070008400 LTnewLM_7 AUGUSTUS CDS 107392 122009 0.28 - 2 ID=LTnewLM_070008400.2:CDS:1;Parent=LTnewLM_070008400.2 LTnewLM_7 AUGUSTUS CDS 122100 126150 0.29 - 0 ID=LTnewLM_070008400.2:CDS:2;Parent=LTnewLM_070008400.2 ### LTnewLM_7 . polypeptide 107392 126150 . - . ID=LTnewLM_070008400.2:pep;Derives_from=LTnewLM_070008400.2;orthologous_to=LTnewLM_070008400.1,LmjF.07.0280_mRNA;ortholog_cluster=OG0000492;product=term%3DC1 domain/HECT-domain (ubiquitin-transferase)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03107|Pfam:PF00632;Ontology_term=GO:0004842 LTnewLM_7 Pfam protein_match 107491 108402 . - . Parent=LTnewLM_070008400.2:pep;Name=PF00632;signature_desc=HECT-domain (ubiquitin-transferase);Ontology_term=GO:0004842 LTnewLM_7 Pfam protein_match 109807 109959 . - . Parent=LTnewLM_070008400.2:pep;Name=PF03107;signature_desc=C1 domain ### LTnewLM_7 AUGUSTUS gene 129430 130194 1 - . ID=LTnewLM_070008500 LTnewLM_7 AUGUSTUS mRNA 129430 130194 1 - . ID=LTnewLM_070008500.1;Parent=LTnewLM_070008500 LTnewLM_7 AUGUSTUS CDS 129430 130194 1 - 0 ID=LTnewLM_070008500.1:CDS:1;Parent=LTnewLM_070008500.1 ### LTnewLM_7 . polypeptide 129430 130194 . - . ID=LTnewLM_070008500.1:pep;Derives_from=LTnewLM_070008500.1;orthologous_to=LmjF.07.0290_mRNA;ortholog_cluster=OG0007119;product=term%3DUncharacterised protein family (UPF0172)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03665 LTnewLM_7 Pfam protein_match 129460 130173 . - . Parent=LTnewLM_070008500.1:pep;Name=PF03665;signature_desc=Uncharacterised protein family (UPF0172) ### LTnewLM_7 AUGUSTUS gene 131655 134204 1 - . ID=LTnewLM_070008600 LTnewLM_7 AUGUSTUS mRNA 131655 134204 1 - . ID=LTnewLM_070008600.1;Parent=LTnewLM_070008600 LTnewLM_7 AUGUSTUS CDS 131655 134204 1 - 0 ID=LTnewLM_070008600.1:CDS:1;Parent=LTnewLM_070008600.1 ### LTnewLM_7 . polypeptide 131655 134204 . - . ID=LTnewLM_070008600.1:pep;Derives_from=LTnewLM_070008600.1;orthologous_to=LmjF.07.0300_mRNA;ortholog_cluster=OG0007120;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 135463 137892 1 - . ID=LTnewLM_070008700 LTnewLM_7 AUGUSTUS mRNA 135463 137892 1 - . ID=LTnewLM_070008700.1;Parent=LTnewLM_070008700 LTnewLM_7 AUGUSTUS CDS 135463 137892 1 - 0 ID=LTnewLM_070008700.1:CDS:1;Parent=LTnewLM_070008700.1 ### LTnewLM_7 . polypeptide 135463 137892 . - . ID=LTnewLM_070008700.1:pep;Derives_from=LTnewLM_070008700.1;orthologous_to=LmjF.07.0310_mRNA;ortholog_cluster=OG0007121;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_7 Pfam protein_match 135934 136698 . - . Parent=LTnewLM_070008700.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_7 AUGUSTUS gene 139388 142810 1 - . ID=LTnewLM_070008800 LTnewLM_7 AUGUSTUS mRNA 139388 142810 1 - . ID=LTnewLM_070008800.1;Parent=LTnewLM_070008800 LTnewLM_7 AUGUSTUS CDS 139388 142810 1 - 0 ID=LTnewLM_070008800.1:CDS:1;Parent=LTnewLM_070008800.1 ### LTnewLM_7 . polypeptide 139388 142810 . - . ID=LTnewLM_070008800.1:pep;Derives_from=LTnewLM_070008800.1;orthologous_to=LmjF.07.0320_mRNA;ortholog_cluster=OG0007122;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 143682 146189 1 - . ID=LTnewLM_070008900 LTnewLM_7 AUGUSTUS mRNA 143682 146189 1 - . ID=LTnewLM_070008900.1;Parent=LTnewLM_070008900 LTnewLM_7 AUGUSTUS CDS 143682 146189 1 - 0 ID=LTnewLM_070008900.1:CDS:1;Parent=LTnewLM_070008900.1 ### LTnewLM_7 . polypeptide 143682 146189 . - . ID=LTnewLM_070008900.1:pep;Derives_from=LTnewLM_070008900.1;orthologous_to=LmjF.07.0330_mRNA;ortholog_cluster=OG0007123;product=term%3DThe Golgi pH Regulator (GPHR) Family N-terminal/Abscisic acid G-protein coupled receptor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12537|Pfam:PF12430 LTnewLM_7 Pfam protein_match 143754 144353 . - . Parent=LTnewLM_070008900.1:pep;Name=PF12430;signature_desc=Abscisic acid G-protein coupled receptor LTnewLM_7 Pfam protein_match 144966 145118 . - . Parent=LTnewLM_070008900.1:pep;Name=PF12537;signature_desc=The Golgi pH Regulator (GPHR) Family N-terminal ### LTnewLM_7 AUGUSTUS gene 147309 149654 1 - . ID=LTnewLM_070009000 LTnewLM_7 AUGUSTUS mRNA 147309 149654 1 - . ID=LTnewLM_070009000.1;Parent=LTnewLM_070009000 LTnewLM_7 AUGUSTUS CDS 147309 149654 1 - 0 ID=LTnewLM_070009000.1:CDS:1;Parent=LTnewLM_070009000.1 ### LTnewLM_7 . polypeptide 147309 149654 . - . ID=LTnewLM_070009000.1:pep;Derives_from=LTnewLM_070009000.1;orthologous_to=LmjF.07.0335_mRNA;ortholog_cluster=OG0007124;product=term%3DNUDIX domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00293;Ontology_term=GO:0016787 LTnewLM_7 Pfam protein_match 148872 149216 . - . Parent=LTnewLM_070009000.1:pep;Name=PF00293;signature_desc=NUDIX domain;Ontology_term=GO:0016787 ### LTnewLM_7 . polypeptide 150975 157139 . - . ID=LTnewLM_070009100.1:pep;Derives_from=LTnewLM_070009100.1;orthologous_to=LmjF.07.0340_mRNA;ortholog_cluster=OG0007125;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_7 Pfam protein_match 155712 156032 . - . Parent=LTnewLM_070009100.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_7 Pfam protein_match 156150 156662 . - . Parent=LTnewLM_070009100.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_7 Liftoff gene 150975 157310 . - . ID=LTnewLM_070009100;coverage=0.984;sequence_ID=0.952;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.07.0340_0 LTnewLM_7 Liftoff mRNA 150975 157310 . - . ID=LTnewLM_070009100.1;Parent=LTnewLM_070009100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_7 Liftoff CDS 150975 151315 . - 2 ID=LTnewLM_070009100.1:CDS:1;Parent=LTnewLM_070009100.1;extra_copy_number=0 LTnewLM_7 Liftoff CDS 155729 157139 . - 0 ID=LTnewLM_070009100.1:CDS:2;Parent=LTnewLM_070009100.1;extra_copy_number=0 LTnewLM_7 Liftoff five_prime_UTR 157140 157310 . - . ID=LTnewLM_070009100:five_prime_UTR;Parent=LTnewLM_070009100.1;extra_copy_number=0 ### LTnewLM_7 AUGUSTUS gene 157989 159959 1 - . ID=LTnewLM_070009200 LTnewLM_7 AUGUSTUS mRNA 157989 159959 1 - . ID=LTnewLM_070009200.1;Parent=LTnewLM_070009200 LTnewLM_7 AUGUSTUS CDS 157989 159959 1 - 0 ID=LTnewLM_070009200.1:CDS:1;Parent=LTnewLM_070009200.1 ### LTnewLM_7 . polypeptide 157989 159959 . - . ID=LTnewLM_070009200.1:pep;Derives_from=LTnewLM_070009200.1;orthologous_to=LmjF.07.0350_mRNA;ortholog_cluster=OG0007126;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 161138 161461 1 - . ID=LTnewLM_070009300 LTnewLM_7 AUGUSTUS mRNA 161138 161461 1 - . ID=LTnewLM_070009300.1;Parent=LTnewLM_070009300 LTnewLM_7 AUGUSTUS CDS 161138 161461 1 - 0 ID=LTnewLM_070009300.1:CDS:1;Parent=LTnewLM_070009300.1 ### LTnewLM_7 . polypeptide 161138 161461 . - . ID=LTnewLM_070009300.1:pep;Derives_from=LTnewLM_070009300.1;orthologous_to=LmjF.07.0360_mRNA;ortholog_cluster=OG0007127;product=term%3DProtein of unknown function (DUF1674)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07896 LTnewLM_7 Pfam protein_match 161144 161269 . - . Parent=LTnewLM_070009300.1:pep;Name=PF07896;signature_desc=Protein of unknown function (DUF1674) ### LTnewLM_7 AUGUSTUS gene 166301 169069 1 - . ID=LTnewLM_070009400 LTnewLM_7 AUGUSTUS mRNA 166301 169069 1 - . ID=LTnewLM_070009400.1;Parent=LTnewLM_070009400 LTnewLM_7 AUGUSTUS CDS 166301 169069 1 - 0 ID=LTnewLM_070009400.1:CDS:1;Parent=LTnewLM_070009400.1 ### LTnewLM_7 . polypeptide 166301 169069 . - . ID=LTnewLM_070009400.1:pep;Derives_from=LTnewLM_070009400.1;orthologous_to=LmjF.07.0370_mRNA;ortholog_cluster=OG0007128;product=term%3DRING-type zinc-finger/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13445|Pfam:PF00097;Ontology_term=GO:0046872 LTnewLM_7 Pfam protein_match 167762 167875 . - . Parent=LTnewLM_070009400.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_7 Pfam protein_match 167765 167875 . - . Parent=LTnewLM_070009400.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger ### LTnewLM_7 . polypeptide 170661 178157 . - . ID=LTnewLM_070009500.1:pep;Derives_from=LTnewLM_070009500.1;orthologous_to=LTnewLM_070009500.2,LmjF.07.0380_mRNA;ortholog_cluster=OG0000493;product=term%3DRAVE protein 1 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12234 LTnewLM_7 Pfam protein_match 175548 175961 . - . Parent=LTnewLM_070009500.1:pep;Name=PF12234;signature_desc=RAVE protein 1 C terminal LTnewLM_7 Pfam protein_match 176073 176852 . - . Parent=LTnewLM_070009500.1:pep;Name=PF12234;signature_desc=RAVE protein 1 C terminal ### LTnewLM_7 AUGUSTUS gene 170661 181463 2 - . ID=LTnewLM_070009500 LTnewLM_7 AUGUSTUS mRNA 170661 178157 1 - . ID=LTnewLM_070009500.1;Parent=LTnewLM_070009500 LTnewLM_7 AUGUSTUS CDS 170661 178157 1 - 0 ID=LTnewLM_070009500.1:CDS:1;Parent=LTnewLM_070009500.1 LTnewLM_7 AUGUSTUS mRNA 170661 181463 1 - . ID=LTnewLM_070009500.2;Parent=LTnewLM_070009500 LTnewLM_7 AUGUSTUS CDS 170661 181463 1 - 0 ID=LTnewLM_070009500.2:CDS:1;Parent=LTnewLM_070009500.2 ### LTnewLM_7 . polypeptide 170661 181463 . - . ID=LTnewLM_070009500.2:pep;Derives_from=LTnewLM_070009500.2;orthologous_to=LTnewLM_070009500.1,LmjF.07.0380_mRNA;ortholog_cluster=OG0000493;product=term%3DRAVE protein 1 C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12234 LTnewLM_7 Pfam protein_match 175548 175961 . - . Parent=LTnewLM_070009500.2:pep;Name=PF12234;signature_desc=RAVE protein 1 C terminal LTnewLM_7 Pfam protein_match 176073 176852 . - . Parent=LTnewLM_070009500.2:pep;Name=PF12234;signature_desc=RAVE protein 1 C terminal ### LTnewLM_7 AUGUSTUS gene 182302 185088 1 - . ID=LTnewLM_070009600 LTnewLM_7 AUGUSTUS mRNA 182302 185088 1 - . ID=LTnewLM_070009600.1;Parent=LTnewLM_070009600 LTnewLM_7 AUGUSTUS CDS 182302 185088 1 - 0 ID=LTnewLM_070009600.1:CDS:1;Parent=LTnewLM_070009600.1 ### LTnewLM_7 . polypeptide 182302 185088 . - . ID=LTnewLM_070009600.1:pep;Derives_from=LTnewLM_070009600.1;orthologous_to=LmjF.07.0390_mRNA;ortholog_cluster=OG0007129;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 186042 187874 1 - . ID=LTnewLM_070009700 LTnewLM_7 AUGUSTUS mRNA 186042 187874 1 - . ID=LTnewLM_070009700.1;Parent=LTnewLM_070009700 LTnewLM_7 AUGUSTUS CDS 186042 187874 1 - 0 ID=LTnewLM_070009700.1:CDS:1;Parent=LTnewLM_070009700.1 ### LTnewLM_7 . polypeptide 186042 187874 . - . ID=LTnewLM_070009700.1:pep;Derives_from=LTnewLM_070009700.1;orthologous_to=LmjF.07.0400_mRNA;ortholog_cluster=OG0007130;product=term%3DEamA-like transporter family/Solute carrier family 35%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00892|Pfam:PF06027;Ontology_term=GO:0006810,GO:0016020,GO:0016021 LTnewLM_7 Pfam protein_match 186063 186743 . - . Parent=LTnewLM_070009700.1:pep;Name=PF06027;signature_desc=Solute carrier family 35;Ontology_term=GO:0006810,GO:0016021 LTnewLM_7 Pfam protein_match 186525 186758 . - . Parent=LTnewLM_070009700.1:pep;Name=PF00892;signature_desc=EamA-like transporter family;Ontology_term=GO:0016020,GO:0016021 ### LTnewLM_7 . pseudogene 192504 194051 . - . ID=LTnewLM_070009800:pseudogene;coverage=1.0;sequence_ID=0.977;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0410_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 192504 194051 . - . ID=LTnewLM_070009800.1;Parent=LTnewLM_070009800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 192504 194051 . - . ID=LTnewLM_070009800.1:pseudogenic_exon:1;Parent=LTnewLM_070009800.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 192504 194051 . - . ID=LTnewLM_070009800.1:pep;Derives_from=LTnewLM_070009800.1;orthologous_to=LmjF.07.0410_mRNA;ortholog_cluster=OG0007722;product=term%3DSAPK-interacting protein 1 (Sin1)%2C Pleckstrin-homology%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16979 LTnewLM_7 Pfam protein_match 192636 192911 . - . Parent=LTnewLM_070009800.1:pep;Name=PF16979;signature_desc=SAPK-interacting protein 1 (Sin1)%2C Pleckstrin-homology ### LTnewLM_7 AUGUSTUS gene 196380 196709 1 - . ID=LTnewLM_070009900 LTnewLM_7 AUGUSTUS mRNA 196380 196709 1 - . ID=LTnewLM_070009900.1;Parent=LTnewLM_070009900 LTnewLM_7 AUGUSTUS CDS 196380 196709 1 - 0 ID=LTnewLM_070009900.1:CDS:1;Parent=LTnewLM_070009900.1 ### LTnewLM_7 . polypeptide 196380 196709 . - . ID=LTnewLM_070009900.1:pep;Derives_from=LTnewLM_070009900.1;orthologous_to=LmjF.07.0420_mRNA;ortholog_cluster=OG0007131;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 197696 198256 1 - . ID=LTnewLM_070010000 LTnewLM_7 AUGUSTUS mRNA 197696 198256 1 - . ID=LTnewLM_070010000.1;Parent=LTnewLM_070010000 LTnewLM_7 AUGUSTUS CDS 197696 198256 1 - 0 ID=LTnewLM_070010000.1:CDS:1;Parent=LTnewLM_070010000.1 ### LTnewLM_7 . polypeptide 197696 198256 . - . ID=LTnewLM_070010000.1:pep;Derives_from=LTnewLM_070010000.1;orthologous_to=LmjF.07.0430_mRNA;ortholog_cluster=OG0007132;product=term%3DN-terminal half of MaoC dehydratase/MaoC like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13452|Pfam:PF01575 LTnewLM_7 Pfam protein_match 197822 198124 . - . Parent=LTnewLM_070010000.1:pep;Name=PF13452;signature_desc=N-terminal half of MaoC dehydratase LTnewLM_7 Pfam protein_match 197846 198121 . - . Parent=LTnewLM_070010000.1:pep;Name=PF01575;signature_desc=MaoC like domain ### LTnewLM_7 . pseudogene 199225 199701 543 - . ID=LTnewLM_070010100:pseudogene;has_internal_stop=false;has_frameshift=false;Target=LmjF.07.0430:mRNA 26 183;original_prot_length=187 LTnewLM_7 . pseudogenic_transcript 199225 199701 . - . ID=LTnewLM_070010100.1;Parent=LTnewLM_070010100:pseudogene LTnewLM_7 . pseudogenic_exon 199225 199701 . - . ID=LTnewLM_070010100.1:pseudogenic_exon:1;Parent=LTnewLM_070010100.1 ### LTnewLM_7 . polypeptide 199225 199701 . - . ID=LTnewLM_070010100.1:pep;Derives_from=LTnewLM_070010100.1;orthologous_to=LmjF.07.0440_mRNA;ortholog_cluster=OG0007723;product=term%3DMaoC like domain/N-terminal half of MaoC dehydratase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01575|Pfam:PF13452 LTnewLM_7 Pfam protein_match 199336 199641 . - . Parent=LTnewLM_070010100.1:pep;Name=PF13452;signature_desc=N-terminal half of MaoC dehydratase LTnewLM_7 Pfam protein_match 199345 199647 . - . Parent=LTnewLM_070010100.1:pep;Name=PF01575;signature_desc=MaoC like domain ### LTnewLM_7 AUGUSTUS gene 200203 200703 1 - . ID=LTnewLM_070010200 LTnewLM_7 AUGUSTUS mRNA 200203 200703 1 - . ID=LTnewLM_070010200.1;Parent=LTnewLM_070010200 LTnewLM_7 AUGUSTUS CDS 200203 200703 1 - 0 ID=LTnewLM_070010200.1:CDS:1;Parent=LTnewLM_070010200.1 ### LTnewLM_7 . polypeptide 200203 200703 . - . ID=LTnewLM_070010200.1:pep;Derives_from=LTnewLM_070010200.1;orthologous_to=LmjF.07.0450_mRNA;ortholog_cluster=OG0007133;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 201516 203075 1 - . ID=LTnewLM_070010300 LTnewLM_7 AUGUSTUS mRNA 201516 203075 1 - . ID=LTnewLM_070010300.1;Parent=LTnewLM_070010300 LTnewLM_7 AUGUSTUS CDS 201516 203075 1 - 0 ID=LTnewLM_070010300.1:CDS:1;Parent=LTnewLM_070010300.1 ### LTnewLM_7 . polypeptide 201516 203075 . - . ID=LTnewLM_070010300.1:pep;Derives_from=LTnewLM_070010300.1;orthologous_to=LmjF.07.0460_mRNA;ortholog_cluster=OG0007134;product=term%3DAcyl-CoA dehydrogenase%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02771;Ontology_term=GO:0055114,GO:0008152,GO:0050660,GO:0016627 LTnewLM_7 Pfam protein_match 202686 202916 . - . Parent=LTnewLM_070010300.1:pep;Name=PF02771;signature_desc=Acyl-CoA dehydrogenase%2C N-terminal domain;Ontology_term=GO:0016627,GO:0050660,GO:0008152,GO:0055114 ### LTnewLM_7 AUGUSTUS gene 203587 205929 1 - . ID=LTnewLM_070010400 LTnewLM_7 AUGUSTUS mRNA 203587 205929 1 - . ID=LTnewLM_070010400.1;Parent=LTnewLM_070010400 LTnewLM_7 AUGUSTUS CDS 203587 205929 1 - 0 ID=LTnewLM_070010400.1:CDS:1;Parent=LTnewLM_070010400.1 ### LTnewLM_7 . polypeptide 203587 205929 . - . ID=LTnewLM_070010400.1:pep;Derives_from=LTnewLM_070010400.1;orthologous_to=LmjF.07.0470_mRNA;ortholog_cluster=OG0007135;product=term%3DAARP2CN (NUC121) domain/40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08142|Pfam:PF04950;Ontology_term=GO:0042254,GO:0005634 LTnewLM_7 Pfam protein_match 203662 204531 . - . Parent=LTnewLM_070010400.1:pep;Name=PF04950;signature_desc=40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal LTnewLM_7 Pfam protein_match 204967 205179 . - . Parent=LTnewLM_070010400.1:pep;Name=PF08142;signature_desc=AARP2CN (NUC121) domain;Ontology_term=GO:0042254,GO:0005634 ### LTnewLM_7 AUGUSTUS gene 207456 208715 0.73 - . ID=LTnewLM_070010500 LTnewLM_7 AUGUSTUS mRNA 207456 208715 0.73 - . ID=LTnewLM_070010500.1;Parent=LTnewLM_070010500 LTnewLM_7 AUGUSTUS CDS 207456 207715 0.81 - 2 ID=LTnewLM_070010500.1:CDS:1;Parent=LTnewLM_070010500.1 LTnewLM_7 AUGUSTUS CDS 208184 208715 0.73 - 0 ID=LTnewLM_070010500.1:CDS:2;Parent=LTnewLM_070010500.1 ### LTnewLM_7 . polypeptide 207456 208715 . - . ID=LTnewLM_070010500.1:pep;Derives_from=LTnewLM_070010500.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 209216 209485 0.84 + . ID=LTnewLM_070010600 LTnewLM_7 AUGUSTUS mRNA 209216 209485 0.84 + . ID=LTnewLM_070010600.1;Parent=LTnewLM_070010600 LTnewLM_7 AUGUSTUS CDS 209216 209485 0.84 + 0 ID=LTnewLM_070010600.1:CDS:1;Parent=LTnewLM_070010600.1 ### LTnewLM_7 . polypeptide 209216 209485 . + . ID=LTnewLM_070010600.1:pep;Derives_from=LTnewLM_070010600.1;orthologous_to=LTnewLM_070012900.1;ortholog_cluster=OG0007136;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 210116 210411 0.72 + . ID=LTnewLM_070010700 LTnewLM_7 AUGUSTUS mRNA 210116 210411 0.72 + . ID=LTnewLM_070010700.1;Parent=LTnewLM_070010700 LTnewLM_7 AUGUSTUS CDS 210116 210187 0.73 + 0 ID=LTnewLM_070010700.1:CDS:1;Parent=LTnewLM_070010700.1 LTnewLM_7 AUGUSTUS CDS 210244 210411 0.78 + 0 ID=LTnewLM_070010700.1:CDS:2;Parent=LTnewLM_070010700.1 ### LTnewLM_7 . polypeptide 210116 210411 . + . ID=LTnewLM_070010700.1:pep;Derives_from=LTnewLM_070010700.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 211035 211349 0.96 + . ID=LTnewLM_070010800 LTnewLM_7 AUGUSTUS mRNA 211035 211349 0.96 + . ID=LTnewLM_070010800.1;Parent=LTnewLM_070010800 LTnewLM_7 AUGUSTUS CDS 211035 211349 0.96 + 0 ID=LTnewLM_070010800.1:CDS:1;Parent=LTnewLM_070010800.1 ### LTnewLM_7 . polypeptide 211035 211349 . + . ID=LTnewLM_070010800.1:pep;Derives_from=LTnewLM_070010800.1;orthologous_to=LTnewLM_070015800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 213481 213960 1 + . ID=LTnewLM_070010900 LTnewLM_7 AUGUSTUS mRNA 213481 213960 1 + . ID=LTnewLM_070010900.1;Parent=LTnewLM_070010900 LTnewLM_7 AUGUSTUS CDS 213481 213960 1 + 0 ID=LTnewLM_070010900.1:CDS:1;Parent=LTnewLM_070010900.1 ### LTnewLM_7 . polypeptide 213481 213960 . + . ID=LTnewLM_070010900.1:pep;Derives_from=LTnewLM_070010900.1;orthologous_to=LmjF.07.0475_mRNA;ortholog_cluster=OG0007137;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 Liftoff gene 214234 228783 . + . ID=LTnewLM_070011000;coverage=0.999;sequence_ID=0.957;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.07.0480_0 LTnewLM_7 Liftoff mRNA 214234 228783 . + . ID=LTnewLM_070011000.1;Parent=LTnewLM_070011000;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_7 Liftoff CDS 214234 228783 . + 0 ID=LTnewLM_070011000.1:CDS:1;Parent=LTnewLM_070011000.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 214234 228783 . + . ID=LTnewLM_070011000.1:pep;Derives_from=LTnewLM_070011000.1;orthologous_to=LmjF.07.0480_mRNA;ortholog_cluster=OG0007138;product=term%3DDynein heavy chain%2C N-terminal region 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08393 LTnewLM_7 Pfam protein_match 216493 217740 . + . Parent=LTnewLM_070011000.1:pep;Name=PF08393;signature_desc=Dynein heavy chain%2C N-terminal region 2 ### LTnewLM_7 AUGUSTUS gene 230314 231510 1 + . ID=LTnewLM_070011100 LTnewLM_7 AUGUSTUS mRNA 230314 231510 1 + . ID=LTnewLM_070011100.1;Parent=LTnewLM_070011100 LTnewLM_7 AUGUSTUS CDS 230314 231510 1 + 0 ID=LTnewLM_070011100.1:CDS:1;Parent=LTnewLM_070011100.1 ### LTnewLM_7 . polypeptide 230314 231510 . + . ID=LTnewLM_070011100.1:pep;Derives_from=LTnewLM_070011100.1;orthologous_to=LmjF.07.0490_mRNA;ortholog_cluster=OG0007139;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 233745 234541 0.85 + . ID=LTnewLM_070011200 LTnewLM_7 AUGUSTUS mRNA 233745 234541 0.85 + . ID=LTnewLM_070011200.1;Parent=LTnewLM_070011200 LTnewLM_7 AUGUSTUS CDS 233745 234116 0.89 + 0 ID=LTnewLM_070011200.1:CDS:1;Parent=LTnewLM_070011200.1 LTnewLM_7 AUGUSTUS CDS 234182 234541 0.85 + 0 ID=LTnewLM_070011200.1:CDS:2;Parent=LTnewLM_070011200.1 ### LTnewLM_7 . polypeptide 233745 234541 . + . ID=LTnewLM_070011200.1:pep;Derives_from=LTnewLM_070011200.1;orthologous_to=LTnewLM_070011300.1,LmjF.07.0500_mRNA,LmjF.07.0510_mRNA;ortholog_cluster=OG0000272;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_7 Pfam protein_match 234117 234296 . + . Parent=LTnewLM_070011200.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_7 AUGUSTUS gene 235695 236489 1 + . ID=LTnewLM_070011300 LTnewLM_7 AUGUSTUS mRNA 235695 236489 1 + . ID=LTnewLM_070011300.1;Parent=LTnewLM_070011300 LTnewLM_7 AUGUSTUS CDS 235695 236489 1 + 0 ID=LTnewLM_070011300.1:CDS:1;Parent=LTnewLM_070011300.1 ### LTnewLM_7 . polypeptide 235695 236489 . + . ID=LTnewLM_070011300.1:pep;Derives_from=LTnewLM_070011300.1;orthologous_to=LTnewLM_070011200.1,LmjF.07.0500_mRNA,LmjF.07.0510_mRNA;ortholog_cluster=OG0000272;product=term%3DRibosomal protein L7Ae/L30e/S12e/Gadd45 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01248 LTnewLM_7 Pfam protein_match 236085 236309 . + . Parent=LTnewLM_070011300.1:pep;Name=PF01248;signature_desc=Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ### LTnewLM_7 AUGUSTUS gene 237702 238412 1 + . ID=LTnewLM_070011400 LTnewLM_7 AUGUSTUS mRNA 237702 238412 1 + . ID=LTnewLM_070011400.1;Parent=LTnewLM_070011400 LTnewLM_7 AUGUSTUS CDS 237702 238412 1 + 0 ID=LTnewLM_070011400.1:CDS:1;Parent=LTnewLM_070011400.1 ### LTnewLM_7 . polypeptide 237702 238412 . + . ID=LTnewLM_070011400.1:pep;Derives_from=LTnewLM_070011400.1;orthologous_to=LmjF.07.0520_mRNA;ortholog_cluster=OG0007140;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 241549 242643 1 + . ID=LTnewLM_070011500 LTnewLM_7 AUGUSTUS mRNA 241549 242643 1 + . ID=LTnewLM_070011500.1;Parent=LTnewLM_070011500 LTnewLM_7 AUGUSTUS CDS 241549 242643 1 + 0 ID=LTnewLM_070011500.1:CDS:1;Parent=LTnewLM_070011500.1 ### LTnewLM_7 . polypeptide 241549 242643 . + . ID=LTnewLM_070011500.1:pep;Derives_from=LTnewLM_070011500.1;orthologous_to=LmjF.07.0530_mRNA;ortholog_cluster=OG0007141;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_7 Pfam protein_match 241804 242016 . + . Parent=LTnewLM_070011500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_7 Pfam protein_match 242101 242337 . + . Parent=LTnewLM_070011500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_7 Pfam protein_match 242383 242622 . + . Parent=LTnewLM_070011500.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_7 AUGUSTUS gene 244971 247946 1.89 + . ID=LTnewLM_070011600 LTnewLM_7 AUGUSTUS mRNA 244971 247946 1 + . ID=LTnewLM_070011600.1;Parent=LTnewLM_070011600 LTnewLM_7 AUGUSTUS CDS 244971 247946 1 + 0 ID=LTnewLM_070011600.1:CDS:1;Parent=LTnewLM_070011600.1 LTnewLM_7 AUGUSTUS mRNA 245145 247946 0.89 + . ID=LTnewLM_070011600.2;Parent=LTnewLM_070011600 LTnewLM_7 AUGUSTUS CDS 245145 247946 0.89 + 0 ID=LTnewLM_070011600.2:CDS:1;Parent=LTnewLM_070011600.2 ### LTnewLM_7 . polypeptide 244971 247946 . + . ID=LTnewLM_070011600.1:pep;Derives_from=LTnewLM_070011600.1;orthologous_to=LTnewLM_070011600.2,LmjF.07.0540_mRNA;ortholog_cluster=OG0000494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . polypeptide 245145 247946 . + . ID=LTnewLM_070011600.2:pep;Derives_from=LTnewLM_070011600.2;orthologous_to=LTnewLM_070011600.1,LmjF.07.0540_mRNA;ortholog_cluster=OG0000494;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 254211 259925 1 + . ID=LTnewLM_070011700 LTnewLM_7 AUGUSTUS mRNA 254211 259925 1 + . ID=LTnewLM_070011700.1;Parent=LTnewLM_070011700 LTnewLM_7 AUGUSTUS CDS 254211 259925 1 + 0 ID=LTnewLM_070011700.1:CDS:1;Parent=LTnewLM_070011700.1 ### LTnewLM_7 . polypeptide 254211 259925 . + . ID=LTnewLM_070011700.1:pep;Derives_from=LTnewLM_070011700.1;orthologous_to=LmjF.07.0550_mRNA;ortholog_cluster=OG0007142;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 261277 261954 1 + . ID=LTnewLM_070011800 LTnewLM_7 AUGUSTUS mRNA 261277 261954 1 + . ID=LTnewLM_070011800.1;Parent=LTnewLM_070011800 LTnewLM_7 AUGUSTUS CDS 261277 261954 1 + 0 ID=LTnewLM_070011800.1:CDS:1;Parent=LTnewLM_070011800.1 ### LTnewLM_7 . polypeptide 261277 261954 . + . ID=LTnewLM_070011800.1:pep;Derives_from=LTnewLM_070011800.1;orthologous_to=LmjF.07.0560_mRNA;ortholog_cluster=OG0007143;product=term%3DADP-ribosylation factor family/Ras of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00025|Pfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_7 Pfam protein_match 261295 261753 . + . Parent=LTnewLM_070011800.1:pep;Name=PF00025;signature_desc=ADP-ribosylation factor family;Ontology_term=GO:0005525 LTnewLM_7 Pfam protein_match 261298 261639 . + . Parent=LTnewLM_070011800.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_7 Pfam protein_match 261298 261777 . + . Parent=LTnewLM_070011800.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 ### LTnewLM_7 AUGUSTUS gene 263673 265070 1 + . ID=LTnewLM_070011900 LTnewLM_7 AUGUSTUS mRNA 263673 265070 1 + . ID=LTnewLM_070011900.1;Parent=LTnewLM_070011900 LTnewLM_7 AUGUSTUS CDS 263673 265070 1 + 0 ID=LTnewLM_070011900.1:CDS:1;Parent=LTnewLM_070011900.1 ### LTnewLM_7 . polypeptide 263673 265070 . + . ID=LTnewLM_070011900.1:pep;Derives_from=LTnewLM_070011900.1;orthologous_to=LmjF.07.0570_mRNA;ortholog_cluster=OG0007144;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . polypeptide 266080 268093 . + . ID=LTnewLM_070012000.1:pep;Derives_from=LTnewLM_070012000.1;orthologous_to=LTnewLM_070012000.2,LTnewLM_070012000.3,LmjF.07.0580_mRNA;ortholog_cluster=OG0000273;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 266080 270185 1.31 + . ID=LTnewLM_070012000 LTnewLM_7 AUGUSTUS mRNA 266080 268093 0.55 + . ID=LTnewLM_070012000.1;Parent=LTnewLM_070012000 LTnewLM_7 AUGUSTUS CDS 266080 267983 0.55 + 0 ID=LTnewLM_070012000.1:CDS:1;Parent=LTnewLM_070012000.1 LTnewLM_7 AUGUSTUS CDS 268087 268093 0.55 + 1 ID=LTnewLM_070012000.1:CDS:2;Parent=LTnewLM_070012000.1 LTnewLM_7 AUGUSTUS mRNA 266080 270185 0.5 + . ID=LTnewLM_070012000.2;Parent=LTnewLM_070012000 LTnewLM_7 AUGUSTUS CDS 266080 268100 0.62 + 0 ID=LTnewLM_070012000.2:CDS:1;Parent=LTnewLM_070012000.2 LTnewLM_7 AUGUSTUS CDS 268166 270185 0.54 + 1 ID=LTnewLM_070012000.2:CDS:2;Parent=LTnewLM_070012000.2 LTnewLM_7 AUGUSTUS mRNA 268365 268866 0.26 + . ID=LTnewLM_070012000.3;Parent=LTnewLM_070012000 LTnewLM_7 AUGUSTUS CDS 268365 268776 0.26 + 0 ID=LTnewLM_070012000.3:CDS:1;Parent=LTnewLM_070012000.3 LTnewLM_7 AUGUSTUS CDS 268844 268866 0.32 + 2 ID=LTnewLM_070012000.3:CDS:2;Parent=LTnewLM_070012000.3 ### LTnewLM_7 . polypeptide 266080 270185 . + . ID=LTnewLM_070012000.2:pep;Derives_from=LTnewLM_070012000.2;orthologous_to=LTnewLM_070012000.1,LTnewLM_070012000.3,LmjF.07.0580_mRNA;ortholog_cluster=OG0000273;product=term%3DmRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16575 LTnewLM_7 Pfam protein_match 268564 268971 . + . Parent=LTnewLM_070012000.2:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop ### LTnewLM_7 . polypeptide 268365 268866 . + . ID=LTnewLM_070012000.3:pep;Derives_from=LTnewLM_070012000.3;orthologous_to=LTnewLM_070012000.1,LTnewLM_070012000.2,LmjF.07.0580_mRNA;ortholog_cluster=OG0000273;product=term%3DmRNA cleavage and polyadenylation factor CLP1 P-loop%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16575 LTnewLM_7 Pfam protein_match 268629 268775 . + . Parent=LTnewLM_070012000.3:pep;Name=PF16575;signature_desc=mRNA cleavage and polyadenylation factor CLP1 P-loop ### LTnewLM_7 AUGUSTUS gene 271329 276140 1.68 + . ID=LTnewLM_070012100 LTnewLM_7 AUGUSTUS mRNA 271329 276140 1 + . ID=LTnewLM_070012100.1;Parent=LTnewLM_070012100 LTnewLM_7 AUGUSTUS CDS 271329 276140 1 + 0 ID=LTnewLM_070012100.1:CDS:1;Parent=LTnewLM_070012100.1 LTnewLM_7 AUGUSTUS mRNA 274527 276140 0.68 + . ID=LTnewLM_070012100.2;Parent=LTnewLM_070012100 LTnewLM_7 AUGUSTUS CDS 274527 276140 0.68 + 0 ID=LTnewLM_070012100.2:CDS:1;Parent=LTnewLM_070012100.2 ### LTnewLM_7 . polypeptide 271329 276140 . + . ID=LTnewLM_070012100.1:pep;Derives_from=LTnewLM_070012100.1;orthologous_to=LTnewLM_070012100.2,LmjF.07.0590_mRNA;ortholog_cluster=OG0000495;product=term%3DSel1 repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08238 LTnewLM_7 Pfam protein_match 273585 273665 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat LTnewLM_7 Pfam protein_match 273678 273773 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat LTnewLM_7 Pfam protein_match 274005 274094 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat LTnewLM_7 Pfam protein_match 274116 274220 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat LTnewLM_7 Pfam protein_match 274392 274496 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat LTnewLM_7 Pfam protein_match 275280 275381 . + . Parent=LTnewLM_070012100.1:pep;Name=PF08238;signature_desc=Sel1 repeat ### LTnewLM_7 . polypeptide 274527 276140 . + . ID=LTnewLM_070012100.2:pep;Derives_from=LTnewLM_070012100.2;orthologous_to=LTnewLM_070012100.1,LmjF.07.0590_mRNA;ortholog_cluster=OG0000495;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 277317 279044 1 + . ID=LTnewLM_070012200 LTnewLM_7 AUGUSTUS mRNA 277317 279044 1 + . ID=LTnewLM_070012200.1;Parent=LTnewLM_070012200 LTnewLM_7 AUGUSTUS CDS 277317 279044 1 + 0 ID=LTnewLM_070012200.1:CDS:1;Parent=LTnewLM_070012200.1 ### LTnewLM_7 . polypeptide 277317 279044 . + . ID=LTnewLM_070012200.1:pep;Derives_from=LTnewLM_070012200.1;orthologous_to=LmjF.07.0600_mRNA;ortholog_cluster=OG0007145;product=term%3DNAD(P)-binding Rossmann-like domain/Electron transfer flavoprotein-ubiquinone oxidoreductase%2C 4Fe-4S%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13450|Pfam:PF05187;Ontology_term=GO:0004174,GO:0055114 LTnewLM_7 Pfam protein_match 277410 277538 . + . Parent=LTnewLM_070012200.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_7 Pfam protein_match 278739 279029 . + . Parent=LTnewLM_070012200.1:pep;Name=PF05187;signature_desc=Electron transfer flavoprotein-ubiquinone oxidoreductase%2C 4Fe-4S;Ontology_term=GO:0004174,GO:0055114 ### LTnewLM_7 AUGUSTUS gene 280401 280988 1 + . ID=LTnewLM_070012300 LTnewLM_7 AUGUSTUS mRNA 280401 280988 1 + . ID=LTnewLM_070012300.1;Parent=LTnewLM_070012300 LTnewLM_7 AUGUSTUS CDS 280401 280988 1 + 0 ID=LTnewLM_070012300.1:CDS:1;Parent=LTnewLM_070012300.1 ### LTnewLM_7 . polypeptide 280401 280988 . + . ID=LTnewLM_070012300.1:pep;Derives_from=LTnewLM_070012300.1;orthologous_to=LmjF.07.0610_mRNA;ortholog_cluster=OG0007146;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 281805 282554 1 + . ID=LTnewLM_070012400 LTnewLM_7 AUGUSTUS mRNA 281805 282554 1 + . ID=LTnewLM_070012400.1;Parent=LTnewLM_070012400 LTnewLM_7 AUGUSTUS CDS 281805 282554 1 + 0 ID=LTnewLM_070012400.1:CDS:1;Parent=LTnewLM_070012400.1 ### LTnewLM_7 . polypeptide 281805 282554 . + . ID=LTnewLM_070012400.1:pep;Derives_from=LTnewLM_070012400.1;orthologous_to=LmjF.07.0615_mRNA;ortholog_cluster=OG0007147;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . polypeptide 283619 285204 . + . ID=LTnewLM_070012500.1:pep;Derives_from=LTnewLM_070012500.1;orthologous_to=LTnewLM_070012500.2,LmjF.07.0620_mRNA;ortholog_cluster=OG0000496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 283619 285508 1.47 + . ID=LTnewLM_070012500 LTnewLM_7 AUGUSTUS mRNA 283619 285204 0.47 + . ID=LTnewLM_070012500.1;Parent=LTnewLM_070012500 LTnewLM_7 AUGUSTUS CDS 283619 285116 0.89 + 0 ID=LTnewLM_070012500.1:CDS:1;Parent=LTnewLM_070012500.1 LTnewLM_7 AUGUSTUS CDS 285173 285204 0.48 + 2 ID=LTnewLM_070012500.1:CDS:2;Parent=LTnewLM_070012500.1 LTnewLM_7 AUGUSTUS mRNA 283619 285508 1 + . ID=LTnewLM_070012500.2;Parent=LTnewLM_070012500 LTnewLM_7 AUGUSTUS CDS 283619 285508 1 + 0 ID=LTnewLM_070012500.2:CDS:1;Parent=LTnewLM_070012500.2 ### LTnewLM_7 . polypeptide 283619 285508 . + . ID=LTnewLM_070012500.2:pep;Derives_from=LTnewLM_070012500.2;orthologous_to=LTnewLM_070012500.1,LmjF.07.0620_mRNA;ortholog_cluster=OG0000496;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 287305 290620 0.94 + . ID=LTnewLM_070012600 LTnewLM_7 AUGUSTUS mRNA 287305 290620 0.94 + . ID=LTnewLM_070012600.1;Parent=LTnewLM_070012600 LTnewLM_7 AUGUSTUS CDS 287305 287811 1 + 0 ID=LTnewLM_070012600.1:CDS:1;Parent=LTnewLM_070012600.1 LTnewLM_7 AUGUSTUS CDS 287855 290620 0.94 + 0 ID=LTnewLM_070012600.1:CDS:2;Parent=LTnewLM_070012600.1 ### LTnewLM_7 . polypeptide 287305 290620 . + . ID=LTnewLM_070012600.1:pep;Derives_from=LTnewLM_070012600.1;orthologous_to=LTnewLM_070012800.1,LmjF.07.0630_mRNA,LmjF.07.0650_mRNA;ortholog_cluster=OG0000274;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702|Pfam:PF13246|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_7 Pfam protein_match 287500 287697 . + . Parent=LTnewLM_070012600.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_7 Pfam protein_match 287827 288405 . + . Parent=LTnewLM_070012600.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_7 Pfam protein_match 288469 289524 . + . Parent=LTnewLM_070012600.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_7 Pfam protein_match 288721 288966 . + . Parent=LTnewLM_070012600.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_7 Pfam protein_match 289741 290256 . + . Parent=LTnewLM_070012600.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus ### LTnewLM_7 AUGUSTUS gene 292101 293108 1 + . ID=LTnewLM_070012700 LTnewLM_7 AUGUSTUS mRNA 292101 293108 1 + . ID=LTnewLM_070012700.1;Parent=LTnewLM_070012700 LTnewLM_7 AUGUSTUS CDS 292101 293108 1 + 0 ID=LTnewLM_070012700.1:CDS:1;Parent=LTnewLM_070012700.1 ### LTnewLM_7 . polypeptide 292101 293108 . + . ID=LTnewLM_070012700.1:pep;Derives_from=LTnewLM_070012700.1;orthologous_to=LmjF.07.0640_mRNA;ortholog_cluster=OG0007148;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 294769 298128 1 + . ID=LTnewLM_070012800 LTnewLM_7 AUGUSTUS mRNA 294769 298128 1 + . ID=LTnewLM_070012800.1;Parent=LTnewLM_070012800 LTnewLM_7 AUGUSTUS CDS 294769 298128 1 + 0 ID=LTnewLM_070012800.1:CDS:1;Parent=LTnewLM_070012800.1 ### LTnewLM_7 . polypeptide 294769 298128 . + . ID=LTnewLM_070012800.1:pep;Derives_from=LTnewLM_070012800.1;orthologous_to=LTnewLM_070012600.1,LmjF.07.0630_mRNA,LmjF.07.0650_mRNA;ortholog_cluster=OG0000274;product=term%3DCation transporter/ATPase%2C N-terminus/E1-E2 ATPase/haloacid dehalogenase-like hydrolase/Cation transport ATPase (P-type)/Cation transporting ATPase%2C C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00690|Pfam:PF00122|Pfam:PF00702|Pfam:PF13246|Pfam:PF00689;Ontology_term=GO:0000166,GO:0046872 LTnewLM_7 Pfam protein_match 295036 295233 . + . Parent=LTnewLM_070012800.1:pep;Name=PF00690;signature_desc=Cation transporter/ATPase%2C N-terminus LTnewLM_7 Pfam protein_match 295405 295983 . + . Parent=LTnewLM_070012800.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 LTnewLM_7 Pfam protein_match 296047 297102 . + . Parent=LTnewLM_070012800.1:pep;Name=PF00702;signature_desc=haloacid dehalogenase-like hydrolase LTnewLM_7 Pfam protein_match 296299 296544 . + . Parent=LTnewLM_070012800.1:pep;Name=PF13246;signature_desc=Cation transport ATPase (P-type) LTnewLM_7 Pfam protein_match 297319 297840 . + . Parent=LTnewLM_070012800.1:pep;Name=PF00689;signature_desc=Cation transporting ATPase%2C C-terminus ### LTnewLM_7 AUGUSTUS gene 299677 299964 0.61 + . ID=LTnewLM_070012900 LTnewLM_7 AUGUSTUS mRNA 299677 299964 0.61 + . ID=LTnewLM_070012900.1;Parent=LTnewLM_070012900 LTnewLM_7 AUGUSTUS CDS 299677 299964 0.61 + 0 ID=LTnewLM_070012900.1:CDS:1;Parent=LTnewLM_070012900.1 ### LTnewLM_7 . polypeptide 299677 299964 . + . ID=LTnewLM_070012900.1:pep;Derives_from=LTnewLM_070012900.1;orthologous_to=LTnewLM_070010600.1;ortholog_cluster=OG0007136;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 304078 305637 1 + . ID=LTnewLM_070013000 LTnewLM_7 AUGUSTUS mRNA 304078 305637 1 + . ID=LTnewLM_070013000.1;Parent=LTnewLM_070013000 LTnewLM_7 AUGUSTUS CDS 304078 305637 1 + 0 ID=LTnewLM_070013000.1:CDS:1;Parent=LTnewLM_070013000.1 ### LTnewLM_7 . polypeptide 304078 305637 . + . ID=LTnewLM_070013000.1:pep;Derives_from=LTnewLM_070013000.1;orthologous_to=LmjF.07.0660_mRNA;ortholog_cluster=OG0007149;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 306905 307411 1 + . ID=LTnewLM_070013100 LTnewLM_7 AUGUSTUS mRNA 306905 307411 1 + . ID=LTnewLM_070013100.1;Parent=LTnewLM_070013100 LTnewLM_7 AUGUSTUS CDS 306905 307411 1 + 0 ID=LTnewLM_070013100.1:CDS:1;Parent=LTnewLM_070013100.1 ### LTnewLM_7 . polypeptide 306905 307411 . + . ID=LTnewLM_070013100.1:pep;Derives_from=LTnewLM_070013100.1;orthologous_to=LmjF.07.0670_mRNA;ortholog_cluster=OG0007150;product=term%3DSnare region anchored in the vesicle membrane C-terminus%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12352 LTnewLM_7 Pfam protein_match 307133 307306 . + . Parent=LTnewLM_070013100.1:pep;Name=PF12352;signature_desc=Snare region anchored in the vesicle membrane C-terminus ### LTnewLM_7 AUGUSTUS gene 308599 309171 1 + . ID=LTnewLM_070013200 LTnewLM_7 AUGUSTUS mRNA 308599 309171 1 + . ID=LTnewLM_070013200.1;Parent=LTnewLM_070013200 LTnewLM_7 AUGUSTUS CDS 308599 309171 1 + 0 ID=LTnewLM_070013200.1:CDS:1;Parent=LTnewLM_070013200.1 ### LTnewLM_7 . polypeptide 308599 309171 . + . ID=LTnewLM_070013200.1:pep;Derives_from=LTnewLM_070013200.1;orthologous_to=LTnewLM_360018700.1,LmjF.07.0680_mRNA,LmjF.36.1250_mRNA;ortholog_cluster=OG0000257;product=term%3DRibosomal protein S4/S9 N-terminal domain/S4 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00163|Pfam:PF01479;Ontology_term=GO:0003723,GO:0019843,GO:0005622 LTnewLM_7 Pfam protein_match 308623 308910 . + . Parent=LTnewLM_070013200.1:pep;Name=PF00163;signature_desc=Ribosomal protein S4/S9 N-terminal domain;Ontology_term=GO:0019843,GO:0005622 LTnewLM_7 Pfam protein_match 308914 309045 . + . Parent=LTnewLM_070013200.1:pep;Name=PF01479;signature_desc=S4 domain;Ontology_term=GO:0003723 ### LTnewLM_7 AUGUSTUS gene 311148 316779 0.77 + . ID=LTnewLM_070013300 LTnewLM_7 AUGUSTUS mRNA 311148 316779 0.77 + . ID=LTnewLM_070013300.1;Parent=LTnewLM_070013300 LTnewLM_7 AUGUSTUS CDS 311148 313117 0.77 + 0 ID=LTnewLM_070013300.1:CDS:1;Parent=LTnewLM_070013300.1 LTnewLM_7 AUGUSTUS CDS 313161 316779 0.94 + 1 ID=LTnewLM_070013300.1:CDS:2;Parent=LTnewLM_070013300.1 ### LTnewLM_7 . polypeptide 311148 316779 . + . ID=LTnewLM_070013300.1:pep;Derives_from=LTnewLM_070013300.1;orthologous_to=LmjF.07.0690_mRNA;ortholog_cluster=OG0007151;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 314673 315674 . + . Parent=LTnewLM_070013300.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_7 Pfam protein_match 314682 314954 . + . Parent=LTnewLM_070013300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 315453 315977 . + . Parent=LTnewLM_070013300.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_7 AUGUSTUS gene 318777 321527 1 + . ID=LTnewLM_070013400 LTnewLM_7 AUGUSTUS mRNA 318777 321527 1 + . ID=LTnewLM_070013400.1;Parent=LTnewLM_070013400 LTnewLM_7 AUGUSTUS CDS 318777 321527 1 + 0 ID=LTnewLM_070013400.1:CDS:1;Parent=LTnewLM_070013400.1 ### LTnewLM_7 . polypeptide 318777 321527 . + . ID=LTnewLM_070013400.1:pep;Derives_from=LTnewLM_070013400.1;orthologous_to=LmjF.07.0700_mRNA;ortholog_cluster=OG0007152;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 322444 323007 1 + . ID=LTnewLM_070013500 LTnewLM_7 AUGUSTUS mRNA 322444 323007 1 + . ID=LTnewLM_070013500.1;Parent=LTnewLM_070013500 LTnewLM_7 AUGUSTUS CDS 322444 323007 1 + 0 ID=LTnewLM_070013500.1:CDS:1;Parent=LTnewLM_070013500.1 ### LTnewLM_7 . polypeptide 322444 323007 . + . ID=LTnewLM_070013500.1:pep;Derives_from=LTnewLM_070013500.1;orthologous_to=LmjF.07.0710_mRNA;ortholog_cluster=OG0007153;product=term%3DEF-hand domain pair/EF hand/EF-hand domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13833|Pfam:PF13499|Pfam:PF00036|Pfam:PF13405|Pfam:PF13202;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 322525 322593 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 322525 322767 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 322528 322611 . + . Parent=LTnewLM_070013500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 322528 322614 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 322531 322593 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 322798 322986 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 322840 322989 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_7 Pfam protein_match 322909 322989 . + . Parent=LTnewLM_070013500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_7 Pfam protein_match 322912 322983 . + . Parent=LTnewLM_070013500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_7 . pseudogene 324363 326135 . + . ID=LTnewLM_070013600:pseudogene;coverage=0.996;sequence_ID=0.912;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0715_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 324363 326135 . + . ID=LTnewLM_070013600.1;Parent=LTnewLM_070013600:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 324363 326135 . + . ID=LTnewLM_070013600.1:pseudogenic_exon:1;Parent=LTnewLM_070013600.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 324363 326135 . + . ID=LTnewLM_070013600.1:pep;Derives_from=LTnewLM_070013600.1;orthologous_to=LmjF.07.0715_mRNA;ortholog_cluster=OG0007724;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 327448 331227 1 + . ID=LTnewLM_070013700 LTnewLM_7 AUGUSTUS mRNA 327448 331227 1 + . ID=LTnewLM_070013700.1;Parent=LTnewLM_070013700 LTnewLM_7 AUGUSTUS CDS 327448 331227 1 + 0 ID=LTnewLM_070013700.1:CDS:1;Parent=LTnewLM_070013700.1 ### LTnewLM_7 . polypeptide 327448 331227 . + . ID=LTnewLM_070013700.1:pep;Derives_from=LTnewLM_070013700.1;orthologous_to=LmjF.07.0720_mRNA;ortholog_cluster=OG0007154;product=term%3DHEAT repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02985;Ontology_term=GO:0005515 LTnewLM_7 Pfam protein_match 328843 328932 . + . Parent=LTnewLM_070013700.1:pep;Name=PF02985;signature_desc=HEAT repeat;Ontology_term=GO:0005515 ### LTnewLM_7 AUGUSTUS gene 332273 334657 1 + . ID=LTnewLM_070013800 LTnewLM_7 AUGUSTUS mRNA 332273 334657 1 + . ID=LTnewLM_070013800.1;Parent=LTnewLM_070013800 LTnewLM_7 AUGUSTUS CDS 332273 334657 1 + 0 ID=LTnewLM_070013800.1:CDS:1;Parent=LTnewLM_070013800.1 ### LTnewLM_7 . polypeptide 332273 334657 . + . ID=LTnewLM_070013800.1:pep;Derives_from=LTnewLM_070013800.1;orthologous_to=LmjF.07.0730_mRNA;ortholog_cluster=OG0007155;product=term%3DMalonyl-CoA decarboxylase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05292;Ontology_term=GO:0050080,GO:0006633 LTnewLM_7 Pfam protein_match 333428 334024 . + . Parent=LTnewLM_070013800.1:pep;Name=PF05292;signature_desc=Malonyl-CoA decarboxylase C-terminal domain;Ontology_term=GO:0050080,GO:0006633 LTnewLM_7 Pfam protein_match 334313 334561 . + . Parent=LTnewLM_070013800.1:pep;Name=PF05292;signature_desc=Malonyl-CoA decarboxylase C-terminal domain;Ontology_term=GO:0050080,GO:0006633 ### LTnewLM_7 AUGUSTUS gene 338200 349608 1 + . ID=LTnewLM_070013900 LTnewLM_7 AUGUSTUS mRNA 338200 349608 1 + . ID=LTnewLM_070013900.1;Parent=LTnewLM_070013900 LTnewLM_7 AUGUSTUS CDS 338200 349608 1 + 0 ID=LTnewLM_070013900.1:CDS:1;Parent=LTnewLM_070013900.1 ### LTnewLM_7 . polypeptide 338200 349608 . + . ID=LTnewLM_070013900.1:pep;Derives_from=LTnewLM_070013900.1;orthologous_to=LmjF.07.0740_mRNA;ortholog_cluster=OG0007156;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 350505 350957 1 + . ID=LTnewLM_070014000 LTnewLM_7 AUGUSTUS mRNA 350505 350957 1 + . ID=LTnewLM_070014000.1;Parent=LTnewLM_070014000 LTnewLM_7 AUGUSTUS CDS 350505 350957 1 + 0 ID=LTnewLM_070014000.1:CDS:1;Parent=LTnewLM_070014000.1 ### LTnewLM_7 . polypeptide 350505 350957 . + . ID=LTnewLM_070014000.1:pep;Derives_from=LTnewLM_070014000.1;orthologous_to=LmjF.07.0743_mRNA;ortholog_cluster=OG0007157;product=term%3DProtein phosphatase inhibitor%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07491 LTnewLM_7 Pfam protein_match 350580 350762 . + . Parent=LTnewLM_070014000.1:pep;Name=PF07491;signature_desc=Protein phosphatase inhibitor ### LTnewLM_7 AUGUSTUS gene 352292 353311 0.79 + . ID=LTnewLM_070014100 LTnewLM_7 AUGUSTUS mRNA 352292 353311 0.79 + . ID=LTnewLM_070014100.1;Parent=LTnewLM_070014100 LTnewLM_7 AUGUSTUS CDS 352292 352357 0.79 + 0 ID=LTnewLM_070014100.1:CDS:1;Parent=LTnewLM_070014100.1 LTnewLM_7 AUGUSTUS CDS 352412 353311 0.79 + 0 ID=LTnewLM_070014100.1:CDS:2;Parent=LTnewLM_070014100.1 ### LTnewLM_7 . polypeptide 352292 353311 . + . ID=LTnewLM_070014100.1:pep;Derives_from=LTnewLM_070014100.1;product=term%3Dhypothetical protein ### LTnewLM_7 . pseudogene 354623 355936 . + . ID=LTnewLM_070014200:pseudogene;coverage=0.991;sequence_ID=0.929;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0750_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 354623 355936 . + . ID=LTnewLM_070014200.1;Parent=LTnewLM_070014200:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 354623 355936 . + . ID=LTnewLM_070014200.1:pseudogenic_exon:1;Parent=LTnewLM_070014200.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 354623 355936 . + . ID=LTnewLM_070014200.1:pep;Derives_from=LTnewLM_070014200.1;orthologous_to=LmjF.07.0750_mRNA;ortholog_cluster=OG0007725;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 357161 361084 1 + . ID=LTnewLM_070014300 LTnewLM_7 AUGUSTUS mRNA 357161 361084 1 + . ID=LTnewLM_070014300.1;Parent=LTnewLM_070014300 LTnewLM_7 AUGUSTUS CDS 357161 361084 1 + 0 ID=LTnewLM_070014300.1:CDS:1;Parent=LTnewLM_070014300.1 ### LTnewLM_7 . polypeptide 357161 361084 . + . ID=LTnewLM_070014300.1:pep;Derives_from=LTnewLM_070014300.1;orthologous_to=LmjF.07.0760_mRNA;ortholog_cluster=OG0007158;product=term%3D6-phosphofructo-2-kinase/Histidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01591|Pfam:PF00300;Ontology_term=GO:0006000,GO:0005524,GO:0003873 LTnewLM_7 Pfam protein_match 358637 358780 . + . Parent=LTnewLM_070014300.1:pep;Name=PF01591;signature_desc=6-phosphofructo-2-kinase;Ontology_term=GO:0003873,GO:0005524,GO:0006000 LTnewLM_7 Pfam protein_match 360305 360469 . + . Parent=LTnewLM_070014300.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) LTnewLM_7 Pfam protein_match 360560 360979 . + . Parent=LTnewLM_070014300.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_7 AUGUSTUS gene 364051 365868 1 + . ID=LTnewLM_070014400 LTnewLM_7 AUGUSTUS mRNA 364051 365868 1 + . ID=LTnewLM_070014400.1;Parent=LTnewLM_070014400 LTnewLM_7 AUGUSTUS CDS 364051 365868 1 + 0 ID=LTnewLM_070014400.1:CDS:1;Parent=LTnewLM_070014400.1 ### LTnewLM_7 . polypeptide 364051 365868 . + . ID=LTnewLM_070014400.1:pep;Derives_from=LTnewLM_070014400.1;orthologous_to=LmjF.07.0770_mRNA;ortholog_cluster=OG0007159;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 368746 370428 1 + . ID=LTnewLM_070014500 LTnewLM_7 AUGUSTUS mRNA 368746 370428 1 + . ID=LTnewLM_070014500.1;Parent=LTnewLM_070014500 LTnewLM_7 AUGUSTUS CDS 368746 370428 1 + 0 ID=LTnewLM_070014500.1:CDS:1;Parent=LTnewLM_070014500.1 ### LTnewLM_7 . polypeptide 368746 370428 . + . ID=LTnewLM_070014500.1:pep;Derives_from=LTnewLM_070014500.1;orthologous_to=LmjF.07.0780_mRNA;ortholog_cluster=OG0007160;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_7 Pfam protein_match 369226 369381 . + . Parent=LTnewLM_070014500.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_7 AUGUSTUS gene 371180 372157 1 + . ID=LTnewLM_070014600 LTnewLM_7 AUGUSTUS mRNA 371180 372157 1 + . ID=LTnewLM_070014600.1;Parent=LTnewLM_070014600 LTnewLM_7 AUGUSTUS CDS 371180 372157 1 + 0 ID=LTnewLM_070014600.1:CDS:1;Parent=LTnewLM_070014600.1 ### LTnewLM_7 . polypeptide 371180 372157 . + . ID=LTnewLM_070014600.1:pep;Derives_from=LTnewLM_070014600.1;orthologous_to=LmjF.07.0790_mRNA;ortholog_cluster=OG0007161;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 373683 375698 1 + . ID=LTnewLM_070014700 LTnewLM_7 AUGUSTUS mRNA 373683 375698 1 + . ID=LTnewLM_070014700.1;Parent=LTnewLM_070014700 LTnewLM_7 AUGUSTUS CDS 373683 375698 1 + 0 ID=LTnewLM_070014700.1:CDS:1;Parent=LTnewLM_070014700.1 ### LTnewLM_7 . polypeptide 373683 375698 . + . ID=LTnewLM_070014700.1:pep;Derives_from=LTnewLM_070014700.1;orthologous_to=LmjF.07.0800_mRNA;ortholog_cluster=OG0007162;product=term%3DPyridine nucleotide-disulphide oxidoreductase/FAD dependent oxidoreductase/FAD binding domain/NAD(P)-binding Rossmann-like domain/Cytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07992|Pfam:PF12831|Pfam:PF01266|Pfam:PF00890|Pfam:PF13450|Pfam:PF00173;Ontology_term=GO:0055114,GO:0016491,GO:0020037 LTnewLM_7 Pfam protein_match 373722 374339 . + . Parent=LTnewLM_070014700.1:pep;Name=PF07992;signature_desc=Pyridine nucleotide-disulphide oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_7 Pfam protein_match 373725 373853 . + . Parent=LTnewLM_070014700.1:pep;Name=PF12831;signature_desc=FAD dependent oxidoreductase LTnewLM_7 Pfam protein_match 373725 373865 . + . Parent=LTnewLM_070014700.1:pep;Name=PF01266;signature_desc=FAD dependent oxidoreductase;Ontology_term=GO:0016491,GO:0055114 LTnewLM_7 Pfam protein_match 373725 375209 . + . Parent=LTnewLM_070014700.1:pep;Name=PF00890;signature_desc=FAD binding domain LTnewLM_7 Pfam protein_match 373731 373847 . + . Parent=LTnewLM_070014700.1:pep;Name=PF13450;signature_desc=NAD(P)-binding Rossmann-like domain LTnewLM_7 Pfam protein_match 375474 375686 . + . Parent=LTnewLM_070014700.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_7 Aragorn_1.2.36 gene 379201 379272 . - . ID=LTnewLM_070014800 LTnewLM_7 Aragorn_1.2.36 tRNA 379201 379272 . - . ID=LTnewLM_070014800:tRNA;Parent=LTnewLM_070014800;aa=Arg;anticodon=acg;gc_content=54.2 ### LTnewLM_7 AUGUSTUS gene 379727 380785 1 + . ID=LTnewLM_070014900 LTnewLM_7 AUGUSTUS mRNA 379727 380785 1 + . ID=LTnewLM_070014900.1;Parent=LTnewLM_070014900 LTnewLM_7 AUGUSTUS CDS 379727 380785 1 + 0 ID=LTnewLM_070014900.1:CDS:1;Parent=LTnewLM_070014900.1 ### LTnewLM_7 . polypeptide 379727 380785 . + . ID=LTnewLM_070014900.1:pep;Derives_from=LTnewLM_070014900.1;orthologous_to=LmjF.07.0802_mRNA;ortholog_cluster=OG0007163;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . pseudogene 381574 383494 . + . ID=LTnewLM_070015000:pseudogene;coverage=0.998;sequence_ID=0.932;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0805_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 381574 383494 . + . ID=LTnewLM_070015000.1;Parent=LTnewLM_070015000:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 381574 383494 . + . ID=LTnewLM_070015000.1:pseudogenic_exon:1;Parent=LTnewLM_070015000.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 381574 383494 . + . ID=LTnewLM_070015000.1:pep;Derives_from=LTnewLM_070015000.1;product=term%3Dhypothetical protein ### LTnewLM_7 . pseudogene 384995 385186 . + . ID=LTnewLM_070015100:pseudogene;coverage=1.0;sequence_ID=0.942;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0810_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 384995 385186 . + . ID=LTnewLM_070015100.1;Parent=LTnewLM_070015100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 384995 385186 . + . ID=LTnewLM_070015100.1:pseudogenic_exon:1;Parent=LTnewLM_070015100.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 384995 385186 . + . ID=LTnewLM_070015100.1:pep;Derives_from=LTnewLM_070015100.1;orthologous_to=LmjF.07.0810_mRNA;ortholog_cluster=OG0007726;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 388746 395984 1 + . ID=LTnewLM_070015200 LTnewLM_7 AUGUSTUS mRNA 388746 395984 1 + . ID=LTnewLM_070015200.1;Parent=LTnewLM_070015200 LTnewLM_7 AUGUSTUS CDS 388746 395984 1 + 0 ID=LTnewLM_070015200.1:CDS:1;Parent=LTnewLM_070015200.1 ### LTnewLM_7 . polypeptide 388746 395984 . + . ID=LTnewLM_070015200.1:pep;Derives_from=LTnewLM_070015200.1;orthologous_to=LTnewLM_070015300.1,LTnewLM_070015400.1,LmjF.07.0820_mRNA,LmjF.07.0830_mRNA,LmjF.07.0840_mRNA;ortholog_cluster=OG0000075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 403262 409192 1 + . ID=LTnewLM_070015300 LTnewLM_7 AUGUSTUS mRNA 403262 409192 1 + . ID=LTnewLM_070015300.1;Parent=LTnewLM_070015300 LTnewLM_7 AUGUSTUS CDS 403262 409192 1 + 0 ID=LTnewLM_070015300.1:CDS:1;Parent=LTnewLM_070015300.1 ### LTnewLM_7 . polypeptide 403262 409192 . + . ID=LTnewLM_070015300.1:pep;Derives_from=LTnewLM_070015300.1;orthologous_to=LTnewLM_070015200.1,LTnewLM_070015400.1,LmjF.07.0820_mRNA,LmjF.07.0830_mRNA,LmjF.07.0840_mRNA;ortholog_cluster=OG0000075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 413178 420212 1 + . ID=LTnewLM_070015400 LTnewLM_7 AUGUSTUS mRNA 413178 420212 1 + . ID=LTnewLM_070015400.1;Parent=LTnewLM_070015400 LTnewLM_7 AUGUSTUS CDS 413178 420212 1 + 0 ID=LTnewLM_070015400.1:CDS:1;Parent=LTnewLM_070015400.1 ### LTnewLM_7 . polypeptide 413178 420212 . + . ID=LTnewLM_070015400.1:pep;Derives_from=LTnewLM_070015400.1;orthologous_to=LTnewLM_070015200.1,LTnewLM_070015300.1,LmjF.07.0820_mRNA,LmjF.07.0830_mRNA,LmjF.07.0840_mRNA;ortholog_cluster=OG0000075;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 423498 424046 1 + . ID=LTnewLM_070015500 LTnewLM_7 AUGUSTUS mRNA 423498 424046 1 + . ID=LTnewLM_070015500.1;Parent=LTnewLM_070015500 LTnewLM_7 AUGUSTUS CDS 423498 424046 1 + 0 ID=LTnewLM_070015500.1:CDS:1;Parent=LTnewLM_070015500.1 ### LTnewLM_7 . polypeptide 423498 424046 . + . ID=LTnewLM_070015500.1:pep;Derives_from=LTnewLM_070015500.1;orthologous_to=LmjF.07.0850_mRNA;ortholog_cluster=OG0007164;product=term%3DUbiquitin-conjugating enzyme%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00179 LTnewLM_7 Pfam protein_match 423606 423995 . + . Parent=LTnewLM_070015500.1:pep;Name=PF00179;signature_desc=Ubiquitin-conjugating enzyme ### LTnewLM_7 AUGUSTUS gene 433478 437871 0.54 + . ID=LTnewLM_070015600 LTnewLM_7 AUGUSTUS mRNA 433478 437871 0.54 + . ID=LTnewLM_070015600.1;Parent=LTnewLM_070015600 LTnewLM_7 AUGUSTUS CDS 433478 436787 0.9 + 0 ID=LTnewLM_070015600.1:CDS:1;Parent=LTnewLM_070015600.1 LTnewLM_7 AUGUSTUS CDS 436832 437871 0.54 + 2 ID=LTnewLM_070015600.1:CDS:2;Parent=LTnewLM_070015600.1 ### LTnewLM_7 . polypeptide 433478 437871 . + . ID=LTnewLM_070015600.1:pep;Derives_from=LTnewLM_070015600.1;orthologous_to=LmjF.07.0860_mRNA;ortholog_cluster=OG0007165;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 439182 440309 1 + . ID=LTnewLM_070015700 LTnewLM_7 AUGUSTUS mRNA 439182 440309 1 + . ID=LTnewLM_070015700.1;Parent=LTnewLM_070015700 LTnewLM_7 AUGUSTUS CDS 439182 440309 1 + 0 ID=LTnewLM_070015700.1:CDS:1;Parent=LTnewLM_070015700.1 ### LTnewLM_7 . polypeptide 439182 440309 . + . ID=LTnewLM_070015700.1:pep;Derives_from=LTnewLM_070015700.1;orthologous_to=LmjF.07.0870_mRNA;ortholog_cluster=OG0007166;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 440983 441465 0.5 + . ID=LTnewLM_070015800 LTnewLM_7 AUGUSTUS mRNA 440983 441465 0.5 + . ID=LTnewLM_070015800.1;Parent=LTnewLM_070015800 LTnewLM_7 AUGUSTUS CDS 440983 441465 0.5 + 0 ID=LTnewLM_070015800.1:CDS:1;Parent=LTnewLM_070015800.1 ### LTnewLM_7 . polypeptide 440983 441465 . + . ID=LTnewLM_070015800.1:pep;Derives_from=LTnewLM_070015800.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070016100.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 445292 449359 1 + . ID=LTnewLM_070015900 LTnewLM_7 AUGUSTUS mRNA 445292 449359 1 + . ID=LTnewLM_070015900.1;Parent=LTnewLM_070015900 LTnewLM_7 AUGUSTUS CDS 445292 449359 1 + 0 ID=LTnewLM_070015900.1:CDS:1;Parent=LTnewLM_070015900.1 ### LTnewLM_7 . polypeptide 445292 449359 . + . ID=LTnewLM_070015900.1:pep;Derives_from=LTnewLM_070015900.1;orthologous_to=LmjF.07.0880_mRNA;ortholog_cluster=OG0007167;product=term%3DProtein tyrosine and serine/threonine kinase/Protein kinase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07714|Pfam:PF00069;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 448385 449263 . + . Parent=LTnewLM_070015900.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_7 Pfam protein_match 448394 449275 . + . Parent=LTnewLM_070015900.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_7 AUGUSTUS gene 454978 456873 1 + . ID=LTnewLM_070016000 LTnewLM_7 AUGUSTUS mRNA 454978 456873 1 + . ID=LTnewLM_070016000.1;Parent=LTnewLM_070016000 LTnewLM_7 AUGUSTUS CDS 454978 456873 1 + 0 ID=LTnewLM_070016000.1:CDS:1;Parent=LTnewLM_070016000.1 ### LTnewLM_7 . polypeptide 454978 456873 . + . ID=LTnewLM_070016000.1:pep;Derives_from=LTnewLM_070016000.1;orthologous_to=LmjF.07.0890_mRNA;ortholog_cluster=OG0007168;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 457650 458303 0.57 + . ID=LTnewLM_070016100 LTnewLM_7 AUGUSTUS mRNA 457650 458303 0.57 + . ID=LTnewLM_070016100.1;Parent=LTnewLM_070016100 LTnewLM_7 AUGUSTUS CDS 457650 458303 0.57 + 0 ID=LTnewLM_070016100.1:CDS:1;Parent=LTnewLM_070016100.1 ### LTnewLM_7 . polypeptide 457650 458303 . + . ID=LTnewLM_070016100.1:pep;Derives_from=LTnewLM_070016100.1;orthologous_to=LTnewLM_070010800.1,LTnewLM_070015800.1,LTnewLM_180005700.1,LTnewLM_290006000.1,LTnewLM_290024000.1,LTnewLM_290024200.1,LTnewLM_290024400.1,LTnewLM_330007300.1;ortholog_cluster=OG0000019;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 460388 461278 1 + . ID=LTnewLM_070016200 LTnewLM_7 AUGUSTUS mRNA 460388 461278 1 + . ID=LTnewLM_070016200.1;Parent=LTnewLM_070016200 LTnewLM_7 AUGUSTUS CDS 460388 461278 1 + 0 ID=LTnewLM_070016200.1:CDS:1;Parent=LTnewLM_070016200.1 ### LTnewLM_7 . polypeptide 460388 461278 . + . ID=LTnewLM_070016200.1:pep;Derives_from=LTnewLM_070016200.1;orthologous_to=LmjF.07.0900_mRNA;ortholog_cluster=OG0007169;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase/Kinase-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714|Pfam:PF14531;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_7 Pfam protein_match 460415 461182 . + . Parent=LTnewLM_070016200.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_7 Pfam protein_match 460418 461167 . + . Parent=LTnewLM_070016200.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_7 Pfam protein_match 460667 461146 . + . Parent=LTnewLM_070016200.1:pep;Name=PF14531;signature_desc=Kinase-like ### LTnewLM_7 AUGUSTUS gene 464948 470431 1 + . ID=LTnewLM_070016300 LTnewLM_7 AUGUSTUS mRNA 464948 470431 1 + . ID=LTnewLM_070016300.1;Parent=LTnewLM_070016300 LTnewLM_7 AUGUSTUS CDS 464948 470431 1 + 0 ID=LTnewLM_070016300.1:CDS:1;Parent=LTnewLM_070016300.1 ### LTnewLM_7 . polypeptide 464948 470431 . + . ID=LTnewLM_070016300.1:pep;Derives_from=LTnewLM_070016300.1;orthologous_to=LmjF.07.0910_mRNA;ortholog_cluster=OG0007170;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 471046 472059 1 + . ID=LTnewLM_070016400 LTnewLM_7 AUGUSTUS mRNA 471046 472059 1 + . ID=LTnewLM_070016400.1;Parent=LTnewLM_070016400 LTnewLM_7 AUGUSTUS CDS 471046 472059 1 + 0 ID=LTnewLM_070016400.1:CDS:1;Parent=LTnewLM_070016400.1 ### LTnewLM_7 . polypeptide 471046 472059 . + . ID=LTnewLM_070016400.1:pep;Derives_from=LTnewLM_070016400.1;product=term%3Dhypothetical protein ### LTnewLM_7 . pseudogene 473456 481177 . + . ID=LTnewLM_070016500:pseudogene;coverage=0.995;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0920_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 473456 481177 . + . ID=LTnewLM_070016500.1;Parent=LTnewLM_070016500:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 473456 481177 . + . ID=LTnewLM_070016500.1:pseudogenic_exon:1;Parent=LTnewLM_070016500.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 473456 481177 . + . ID=LTnewLM_070016500.1:pep;Derives_from=LTnewLM_070016500.1;orthologous_to=LmjF.07.0920_mRNA;ortholog_cluster=OG0007727;product=term%3DVacuolar membrane-associated protein Iml1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12257 LTnewLM_7 Pfam protein_match 474980 475942 . + . Parent=LTnewLM_070016500.1:pep;Name=PF12257;signature_desc=Vacuolar membrane-associated protein Iml1 ### LTnewLM_7 Liftoff gene 481908 482915 . + . ID=LTnewLM_070016600;coverage=1.0;sequence_ID=0.975;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.0930_0 LTnewLM_7 Liftoff mRNA 481908 482915 . + . ID=LTnewLM_070016600.1;Parent=LTnewLM_070016600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_7 Liftoff CDS 481908 482915 . + 0 ID=LTnewLM_070016600.1:CDS:1;Parent=LTnewLM_070016600.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 481908 482915 . + . ID=LTnewLM_070016600.1:pep;Derives_from=LTnewLM_070016600.1;orthologous_to=LmjF.07.0930_mRNA;ortholog_cluster=OG0007171;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 485068 492414 1 + . ID=LTnewLM_070016700 LTnewLM_7 AUGUSTUS mRNA 485068 492414 1 + . ID=LTnewLM_070016700.1;Parent=LTnewLM_070016700 LTnewLM_7 AUGUSTUS CDS 485068 492414 1 + 0 ID=LTnewLM_070016700.1:CDS:1;Parent=LTnewLM_070016700.1 ### LTnewLM_7 . polypeptide 485068 492414 . + . ID=LTnewLM_070016700.1:pep;Derives_from=LTnewLM_070016700.1;orthologous_to=LmjF.07.0940_mRNA;ortholog_cluster=OG0007172;product=term%3DDomain of unknown function (DUF3437)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11919 LTnewLM_7 Pfam protein_match 492148 492408 . + . Parent=LTnewLM_070016700.1:pep;Name=PF11919;signature_desc=Domain of unknown function (DUF3437) ### LTnewLM_7 AUGUSTUS gene 495017 502297 2 + . ID=LTnewLM_070016800 LTnewLM_7 AUGUSTUS mRNA 495017 502297 1 + . ID=LTnewLM_070016800.1;Parent=LTnewLM_070016800 LTnewLM_7 AUGUSTUS CDS 495017 502297 1 + 0 ID=LTnewLM_070016800.1:CDS:1;Parent=LTnewLM_070016800.1 LTnewLM_7 AUGUSTUS mRNA 500171 502297 1 + . ID=LTnewLM_070016800.2;Parent=LTnewLM_070016800 LTnewLM_7 AUGUSTUS CDS 500171 502297 1 + 0 ID=LTnewLM_070016800.2:CDS:1;Parent=LTnewLM_070016800.2 ### LTnewLM_7 . polypeptide 495017 502297 . + . ID=LTnewLM_070016800.1:pep;Derives_from=LTnewLM_070016800.1;orthologous_to=LTnewLM_070016800.2,LmjF.07.0950_mRNA;ortholog_cluster=OG0000497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 . polypeptide 500171 502297 . + . ID=LTnewLM_070016800.2:pep;Derives_from=LTnewLM_070016800.2;orthologous_to=LTnewLM_070016800.1,LmjF.07.0950_mRNA;ortholog_cluster=OG0000497;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 503824 507285 1 + . ID=LTnewLM_070016900 LTnewLM_7 AUGUSTUS mRNA 503824 507285 1 + . ID=LTnewLM_070016900.1;Parent=LTnewLM_070016900 LTnewLM_7 AUGUSTUS CDS 503824 507285 1 + 0 ID=LTnewLM_070016900.1:CDS:1;Parent=LTnewLM_070016900.1 ### LTnewLM_7 . polypeptide 503824 507285 . + . ID=LTnewLM_070016900.1:pep;Derives_from=LTnewLM_070016900.1;orthologous_to=LmjF.07.0960_mRNA;ortholog_cluster=OG0007173;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 508872 511496 1 + . ID=LTnewLM_070017000 LTnewLM_7 AUGUSTUS mRNA 508872 511496 1 + . ID=LTnewLM_070017000.1;Parent=LTnewLM_070017000 LTnewLM_7 AUGUSTUS CDS 508872 511496 1 + 0 ID=LTnewLM_070017000.1:CDS:1;Parent=LTnewLM_070017000.1 ### LTnewLM_7 . polypeptide 508872 511496 . + . ID=LTnewLM_070017000.1:pep;Derives_from=LTnewLM_070017000.1;orthologous_to=LmjF.07.0970_mRNA;ortholog_cluster=OG0007174;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 512411 512767 1 + . ID=LTnewLM_070017100 LTnewLM_7 AUGUSTUS mRNA 512411 512767 1 + . ID=LTnewLM_070017100.1;Parent=LTnewLM_070017100 LTnewLM_7 AUGUSTUS CDS 512411 512767 1 + 0 ID=LTnewLM_070017100.1:CDS:1;Parent=LTnewLM_070017100.1 ### LTnewLM_7 . polypeptide 512411 512767 . + . ID=LTnewLM_070017100.1:pep;Derives_from=LTnewLM_070017100.1;orthologous_to=LmjF.07.0980_mRNA;ortholog_cluster=OG0007175;product=term%3DNucleoplasmin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17800 LTnewLM_7 Pfam protein_match 512420 512689 . + . Parent=LTnewLM_070017100.1:pep;Name=PF17800;signature_desc=Nucleoplasmin-like domain ### LTnewLM_7 AUGUSTUS gene 514070 515125 1 + . ID=LTnewLM_070017200 LTnewLM_7 AUGUSTUS mRNA 514070 515125 1 + . ID=LTnewLM_070017200.1;Parent=LTnewLM_070017200 LTnewLM_7 AUGUSTUS CDS 514070 515125 1 + 0 ID=LTnewLM_070017200.1:CDS:1;Parent=LTnewLM_070017200.1 ### LTnewLM_7 . polypeptide 514070 515125 . + . ID=LTnewLM_070017200.1:pep;Derives_from=LTnewLM_070017200.1;orthologous_to=LmjF.07.0990_mRNA;ortholog_cluster=OG0007176;product=term%3DNucleoplasmin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17800 LTnewLM_7 Pfam protein_match 514079 514345 . + . Parent=LTnewLM_070017200.1:pep;Name=PF17800;signature_desc=Nucleoplasmin-like domain ### LTnewLM_7 AUGUSTUS gene 517782 518786 1 + . ID=LTnewLM_070017300 LTnewLM_7 AUGUSTUS mRNA 517782 518786 1 + . ID=LTnewLM_070017300.1;Parent=LTnewLM_070017300 LTnewLM_7 AUGUSTUS CDS 517782 518786 1 + 0 ID=LTnewLM_070017300.1:CDS:1;Parent=LTnewLM_070017300.1 ### LTnewLM_7 . polypeptide 517782 518786 . + . ID=LTnewLM_070017300.1:pep;Derives_from=LTnewLM_070017300.1;orthologous_to=LmjF.07.1000_mRNA;ortholog_cluster=OG0007177;product=term%3DNucleoplasmin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17800 LTnewLM_7 Pfam protein_match 517794 518057 . + . Parent=LTnewLM_070017300.1:pep;Name=PF17800;signature_desc=Nucleoplasmin-like domain ### LTnewLM_7 AUGUSTUS gene 520310 520798 1 + . ID=LTnewLM_070017400 LTnewLM_7 AUGUSTUS mRNA 520310 520798 1 + . ID=LTnewLM_070017400.1;Parent=LTnewLM_070017400 LTnewLM_7 AUGUSTUS CDS 520310 520798 1 + 0 ID=LTnewLM_070017400.1:CDS:1;Parent=LTnewLM_070017400.1 ### LTnewLM_7 . polypeptide 520310 520798 . + . ID=LTnewLM_070017400.1:pep;Derives_from=LTnewLM_070017400.1;orthologous_to=LmjF.07.1010_mRNA;ortholog_cluster=OG0007178;product=term%3DIron-sulfur cluster assembly protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01883 LTnewLM_7 Pfam protein_match 520436 520654 . + . Parent=LTnewLM_070017400.1:pep;Name=PF01883;signature_desc=Iron-sulfur cluster assembly protein ### LTnewLM_7 AUGUSTUS gene 521809 525837 2 + . ID=LTnewLM_070017500 LTnewLM_7 AUGUSTUS mRNA 521809 525837 1 + . ID=LTnewLM_070017500.1;Parent=LTnewLM_070017500 LTnewLM_7 AUGUSTUS CDS 521809 525837 1 + 0 ID=LTnewLM_070017500.1:CDS:1;Parent=LTnewLM_070017500.1 LTnewLM_7 AUGUSTUS mRNA 525427 525837 1 + . ID=LTnewLM_070017500.2;Parent=LTnewLM_070017500 LTnewLM_7 AUGUSTUS CDS 525427 525837 1 + 0 ID=LTnewLM_070017500.2:CDS:1;Parent=LTnewLM_070017500.2 ### LTnewLM_7 . polypeptide 521809 525837 . + . ID=LTnewLM_070017500.1:pep;Derives_from=LTnewLM_070017500.1;orthologous_to=LTnewLM_070017500.2,LmjF.07.1020_mRNA;ortholog_cluster=OG0000498;product=term%3DPIF1-like helicase/AAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05970|Pfam:PF13604|Pfam:PF13245;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_7 Pfam protein_match 522940 523491 . + . Parent=LTnewLM_070017500.1:pep;Name=PF05970;signature_desc=PIF1-like helicase;Ontology_term=GO:0003678,GO:0000723,GO:0006281 LTnewLM_7 Pfam protein_match 522940 523590 . + . Parent=LTnewLM_070017500.1:pep;Name=PF13604;signature_desc=AAA domain LTnewLM_7 Pfam protein_match 522976 523386 . + . Parent=LTnewLM_070017500.1:pep;Name=PF13245;signature_desc=AAA domain ### LTnewLM_7 . polypeptide 525427 525837 . + . ID=LTnewLM_070017500.2:pep;Derives_from=LTnewLM_070017500.2;orthologous_to=LTnewLM_070017500.1,LmjF.07.1020_mRNA;ortholog_cluster=OG0000498;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 526824 527171 1 + . ID=LTnewLM_070017600 LTnewLM_7 AUGUSTUS mRNA 526824 527171 1 + . ID=LTnewLM_070017600.1;Parent=LTnewLM_070017600 LTnewLM_7 AUGUSTUS CDS 526824 527171 1 + 0 ID=LTnewLM_070017600.1:CDS:1;Parent=LTnewLM_070017600.1 ### LTnewLM_7 . polypeptide 526824 527171 . + . ID=LTnewLM_070017600.1:pep;Derives_from=LTnewLM_070017600.1;orthologous_to=LmjF.07.1030_mRNA;ortholog_cluster=OG0007179;product=term%3DPPIC-type PPIASE domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13616|Pfam:PF00639;Ontology_term=GO:0016853 LTnewLM_7 Pfam protein_match 526836 527156 . + . Parent=LTnewLM_070017600.1:pep;Name=PF13616;signature_desc=PPIC-type PPIASE domain LTnewLM_7 Pfam protein_match 526851 527162 . + . Parent=LTnewLM_070017600.1:pep;Name=PF00639;signature_desc=PPIC-type PPIASE domain;Ontology_term=GO:0016853 ### LTnewLM_7 AUGUSTUS gene 528918 530042 1 + . ID=LTnewLM_070017700 LTnewLM_7 AUGUSTUS mRNA 528918 530042 1 + . ID=LTnewLM_070017700.1;Parent=LTnewLM_070017700 LTnewLM_7 AUGUSTUS CDS 528918 530042 1 + 0 ID=LTnewLM_070017700.1:CDS:1;Parent=LTnewLM_070017700.1 ### LTnewLM_7 . polypeptide 528918 530042 . + . ID=LTnewLM_070017700.1:pep;Derives_from=LTnewLM_070017700.1;product=term%3Dhypothetical protein ### LTnewLM_7 . pseudogene 530446 531079 . + . ID=LTnewLM_070017800:pseudogene;coverage=0.981;sequence_ID=0.928;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.1035_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 530446 531079 . + . ID=LTnewLM_070017800.1;Parent=LTnewLM_070017800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 530446 531079 . + . ID=LTnewLM_070017800.1:pseudogenic_exon:1;Parent=LTnewLM_070017800.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 530446 531079 . + . ID=LTnewLM_070017800.1:pep;Derives_from=LTnewLM_070017800.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 532306 533280 1 + . ID=LTnewLM_070017900 LTnewLM_7 AUGUSTUS mRNA 532306 533280 1 + . ID=LTnewLM_070017900.1;Parent=LTnewLM_070017900 LTnewLM_7 AUGUSTUS CDS 532306 533280 1 + 0 ID=LTnewLM_070017900.1:CDS:1;Parent=LTnewLM_070017900.1 ### LTnewLM_7 . polypeptide 532306 533280 . + . ID=LTnewLM_070017900.1:pep;Derives_from=LTnewLM_070017900.1;orthologous_to=LmjF.07.1040_mRNA;ortholog_cluster=OG0007180;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 534317 538048 1 + . ID=LTnewLM_070018000 LTnewLM_7 AUGUSTUS mRNA 534317 538048 1 + . ID=LTnewLM_070018000.1;Parent=LTnewLM_070018000 LTnewLM_7 AUGUSTUS CDS 534317 538048 1 + 0 ID=LTnewLM_070018000.1:CDS:1;Parent=LTnewLM_070018000.1 ### LTnewLM_7 . polypeptide 534317 538048 . + . ID=LTnewLM_070018000.1:pep;Derives_from=LTnewLM_070018000.1;orthologous_to=LmjF.07.1050_mRNA;ortholog_cluster=OG0007181;product=term%3DE1-E2 ATPase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00122;Ontology_term=GO:0000166,GO:0046872 LTnewLM_7 Pfam protein_match 535115 535723 . + . Parent=LTnewLM_070018000.1:pep;Name=PF00122;signature_desc=E1-E2 ATPase;Ontology_term=GO:0000166,GO:0046872 ### LTnewLM_7 AUGUSTUS gene 539892 540242 1 + . ID=LTnewLM_070018100 LTnewLM_7 AUGUSTUS mRNA 539892 540242 1 + . ID=LTnewLM_070018100.1;Parent=LTnewLM_070018100 LTnewLM_7 AUGUSTUS CDS 539892 540242 1 + 0 ID=LTnewLM_070018100.1:CDS:1;Parent=LTnewLM_070018100.1 ### LTnewLM_7 . polypeptide 539892 540242 . + . ID=LTnewLM_070018100.1:pep;Derives_from=LTnewLM_070018100.1;orthologous_to=LmjF.07.1055_mRNA;ortholog_cluster=OG0007182;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_7 Pfam protein_match 540054 540164 . + . Parent=LTnewLM_070018100.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_7 AUGUSTUS gene 541124 542668 1 + . ID=LTnewLM_070018200 LTnewLM_7 AUGUSTUS mRNA 541124 542668 1 + . ID=LTnewLM_070018200.1;Parent=LTnewLM_070018200 LTnewLM_7 AUGUSTUS CDS 541124 542668 1 + 0 ID=LTnewLM_070018200.1:CDS:1;Parent=LTnewLM_070018200.1 ### LTnewLM_7 . polypeptide 541124 542668 . + . ID=LTnewLM_070018200.1:pep;Derives_from=LTnewLM_070018200.1;orthologous_to=LmjF.07.1060_mRNA;ortholog_cluster=OG0007183;product=term%3DBiotin/lipoate A/B protein ligase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03099;Ontology_term=GO:0006464 LTnewLM_7 Pfam protein_match 541382 541702 . + . Parent=LTnewLM_070018200.1:pep;Name=PF03099;signature_desc=Biotin/lipoate A/B protein ligase family;Ontology_term=GO:0006464 ### LTnewLM_7 AUGUSTUS gene 543221 544573 1 + . ID=LTnewLM_070018300 LTnewLM_7 AUGUSTUS mRNA 543221 544573 1 + . ID=LTnewLM_070018300.1;Parent=LTnewLM_070018300 LTnewLM_7 AUGUSTUS CDS 543221 544573 1 + 0 ID=LTnewLM_070018300.1:CDS:1;Parent=LTnewLM_070018300.1 ### LTnewLM_7 . polypeptide 543221 544573 . + . ID=LTnewLM_070018300.1:pep;Derives_from=LTnewLM_070018300.1;orthologous_to=LmjF.07.1070_mRNA;ortholog_cluster=OG0007184;product=term%3DZinc finger%2C C2H2 type%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00096;Ontology_term=GO:0046872 LTnewLM_7 Pfam protein_match 543407 543475 . + . Parent=LTnewLM_070018300.1:pep;Name=PF00096;signature_desc=Zinc finger%2C C2H2 type;Ontology_term=GO:0046872 ### LTnewLM_7 AUGUSTUS gene 546076 548595 1 + . ID=LTnewLM_070018400 LTnewLM_7 AUGUSTUS mRNA 546076 548595 1 + . ID=LTnewLM_070018400.1;Parent=LTnewLM_070018400 LTnewLM_7 AUGUSTUS CDS 546076 548595 1 + 0 ID=LTnewLM_070018400.1:CDS:1;Parent=LTnewLM_070018400.1 ### LTnewLM_7 . polypeptide 546076 548595 . + . ID=LTnewLM_070018400.1:pep;Derives_from=LTnewLM_070018400.1;orthologous_to=LmjF.07.1080_mRNA;ortholog_cluster=OG0007185;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 550081 551334 1 + . ID=LTnewLM_070018500 LTnewLM_7 AUGUSTUS mRNA 550081 551334 1 + . ID=LTnewLM_070018500.1;Parent=LTnewLM_070018500 LTnewLM_7 AUGUSTUS CDS 550081 551334 1 + 0 ID=LTnewLM_070018500.1:CDS:1;Parent=LTnewLM_070018500.1 ### LTnewLM_7 . polypeptide 550081 551334 . + . ID=LTnewLM_070018500.1:pep;Derives_from=LTnewLM_070018500.1;orthologous_to=LmjF.07.1090_mRNA;ortholog_cluster=OG0007186;product=term%3DFatty acid desaturase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00487;Ontology_term=GO:0006629 LTnewLM_7 Pfam protein_match 550483 551256 . + . Parent=LTnewLM_070018500.1:pep;Name=PF00487;signature_desc=Fatty acid desaturase;Ontology_term=GO:0006629 ### LTnewLM_7 Liftoff gene 552874 553794 . + . ID=LTnewLM_070018600;coverage=1.0;sequence_ID=0.938;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.07.1100_0 LTnewLM_7 Liftoff mRNA 552874 553794 . + . ID=LTnewLM_070018600.1;Parent=LTnewLM_070018600;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_7 Liftoff CDS 552874 553794 . + 0 ID=LTnewLM_070018600.1:CDS:1;Parent=LTnewLM_070018600.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 552874 553794 . + . ID=LTnewLM_070018600.1:pep;Derives_from=LTnewLM_070018600.1;orthologous_to=LmjF.07.1100_mRNA;ortholog_cluster=OG0007187;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 554448 554759 1 + . ID=LTnewLM_070018700 LTnewLM_7 AUGUSTUS mRNA 554448 554759 1 + . ID=LTnewLM_070018700.1;Parent=LTnewLM_070018700 LTnewLM_7 AUGUSTUS CDS 554448 554759 1 + 0 ID=LTnewLM_070018700.1:CDS:1;Parent=LTnewLM_070018700.1 ### LTnewLM_7 . polypeptide 554448 554759 . + . ID=LTnewLM_070018700.1:pep;Derives_from=LTnewLM_070018700.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 555299 555619 1 + . ID=LTnewLM_070018800 LTnewLM_7 AUGUSTUS mRNA 555299 555619 1 + . ID=LTnewLM_070018800.1;Parent=LTnewLM_070018800 LTnewLM_7 AUGUSTUS CDS 555299 555619 1 + 0 ID=LTnewLM_070018800.1:CDS:1;Parent=LTnewLM_070018800.1 ### LTnewLM_7 . polypeptide 555299 555619 . + . ID=LTnewLM_070018800.1:pep;Derives_from=LTnewLM_070018800.1;orthologous_to=LTnewLM_240011600.1,LTnewLM_260009600.1,LmjF.24.0630_mRNA,LmjF.26.0460_mRNA;ortholog_cluster=OG0000090;product=term%3DATP synthase subunit C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00137;Ontology_term=GO:0033177,GO:0015991,GO:0015078 LTnewLM_7 Pfam protein_match 555422 555604 . + . Parent=LTnewLM_070018800.1:pep;Name=PF00137;signature_desc=ATP synthase subunit C;Ontology_term=GO:0015078,GO:0015991,GO:0033177 ### LTnewLM_7 AUGUSTUS gene 556963 558051 1 + . ID=LTnewLM_070018900 LTnewLM_7 AUGUSTUS mRNA 556963 558051 1 + . ID=LTnewLM_070018900.1;Parent=LTnewLM_070018900 LTnewLM_7 AUGUSTUS CDS 556963 558051 1 + 0 ID=LTnewLM_070018900.1:CDS:1;Parent=LTnewLM_070018900.1 ### LTnewLM_7 . polypeptide 556963 558051 . + . ID=LTnewLM_070018900.1:pep;Derives_from=LTnewLM_070018900.1;orthologous_to=LmjF.07.1110_mRNA;ortholog_cluster=OG0007188;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 559740 560777 1 + . ID=LTnewLM_070019000 LTnewLM_7 AUGUSTUS mRNA 559740 560777 1 + . ID=LTnewLM_070019000.1;Parent=LTnewLM_070019000 LTnewLM_7 AUGUSTUS CDS 559740 560777 1 + 0 ID=LTnewLM_070019000.1:CDS:1;Parent=LTnewLM_070019000.1 ### LTnewLM_7 . polypeptide 559740 560777 . + . ID=LTnewLM_070019000.1:pep;Derives_from=LTnewLM_070019000.1;orthologous_to=LmjF.07.1120_mRNA;ortholog_cluster=OG0007189;product=term%3Dvon Willebrand factor type A domain/Ubiquitin interaction motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13519|Pfam:PF02809 LTnewLM_7 Pfam protein_match 559758 560078 . + . Parent=LTnewLM_070019000.1:pep;Name=PF13519;signature_desc=von Willebrand factor type A domain LTnewLM_7 Pfam protein_match 560376 560414 . + . Parent=LTnewLM_070019000.1:pep;Name=PF02809;signature_desc=Ubiquitin interaction motif LTnewLM_7 Pfam protein_match 560574 560621 . + . Parent=LTnewLM_070019000.1:pep;Name=PF02809;signature_desc=Ubiquitin interaction motif ### LTnewLM_7 AUGUSTUS gene 562873 564603 1 + . ID=LTnewLM_070019100 LTnewLM_7 AUGUSTUS mRNA 562873 564603 1 + . ID=LTnewLM_070019100.1;Parent=LTnewLM_070019100 LTnewLM_7 AUGUSTUS CDS 562873 564603 1 + 0 ID=LTnewLM_070019100.1:CDS:1;Parent=LTnewLM_070019100.1 ### LTnewLM_7 . polypeptide 562873 564603 . + . ID=LTnewLM_070019100.1:pep;Derives_from=LTnewLM_070019100.1;orthologous_to=LmjF.07.1130_mRNA;ortholog_cluster=OG0007190;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 565445 565975 1 + . ID=LTnewLM_070019200 LTnewLM_7 AUGUSTUS mRNA 565445 565975 1 + . ID=LTnewLM_070019200.1;Parent=LTnewLM_070019200 LTnewLM_7 AUGUSTUS CDS 565445 565975 1 + 0 ID=LTnewLM_070019200.1:CDS:1;Parent=LTnewLM_070019200.1 ### LTnewLM_7 . polypeptide 565445 565975 . + . ID=LTnewLM_070019200.1:pep;Derives_from=LTnewLM_070019200.1;orthologous_to=LmjF.07.1140_mRNA;ortholog_cluster=OG0007191;product=term%3DPeptide methionine sulfoxide reductase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01625;Ontology_term=GO:0055114,GO:0008113 LTnewLM_7 Pfam protein_match 565463 565954 . + . Parent=LTnewLM_070019200.1:pep;Name=PF01625;signature_desc=Peptide methionine sulfoxide reductase;Ontology_term=GO:0008113,GO:0055114 ### LTnewLM_7 AUGUSTUS gene 568148 575776 1 + . ID=LTnewLM_070019300 LTnewLM_7 AUGUSTUS mRNA 568148 575776 1 + . ID=LTnewLM_070019300.1;Parent=LTnewLM_070019300 LTnewLM_7 AUGUSTUS CDS 568148 575776 1 + 0 ID=LTnewLM_070019300.1:CDS:1;Parent=LTnewLM_070019300.1 ### LTnewLM_7 . polypeptide 568148 575776 . + . ID=LTnewLM_070019300.1:pep;Derives_from=LTnewLM_070019300.1;orthologous_to=LmjF.07.1150_mRNA;ortholog_cluster=OG0007192;product=term%3DN-terminal region of Chorein or VPS13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12624 LTnewLM_7 Pfam protein_match 568193 568357 . + . Parent=LTnewLM_070019300.1:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 ### LTnewLM_7 AUGUSTUS gene 576626 578101 1 + . ID=LTnewLM_070019400 LTnewLM_7 AUGUSTUS mRNA 576626 578101 1 + . ID=LTnewLM_070019400.1;Parent=LTnewLM_070019400 LTnewLM_7 AUGUSTUS CDS 576626 578101 1 + 0 ID=LTnewLM_070019400.1:CDS:1;Parent=LTnewLM_070019400.1 ### LTnewLM_7 . polypeptide 576626 578101 . + . ID=LTnewLM_070019400.1:pep;Derives_from=LTnewLM_070019400.1;orthologous_to=LmjF.07.1160_mRNA;ortholog_cluster=OG0007193;product=term%3DTransmembrane amino acid transporter protein/Tryptophan/tyrosine permease family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01490|Pfam:PF03222;Ontology_term=GO:0003333 LTnewLM_7 Pfam protein_match 576911 578083 . + . Parent=LTnewLM_070019400.1:pep;Name=PF01490;signature_desc=Transmembrane amino acid transporter protein LTnewLM_7 Pfam protein_match 576914 577396 . + . Parent=LTnewLM_070019400.1:pep;Name=PF03222;signature_desc=Tryptophan/tyrosine permease family;Ontology_term=GO:0003333 ### LTnewLM_7 . pseudogene 583446 585891 . + . ID=LTnewLM_070019500:pseudogene;coverage=0.997;sequence_ID=0.906;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.02.0010_0;has_internal_stop=true LTnewLM_7 . pseudogenic_transcript 583446 585891 . + . ID=LTnewLM_070019500.1;Parent=LTnewLM_070019500:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_7 . pseudogenic_exon 583446 585891 . + . ID=LTnewLM_070019500.1:pseudogenic_exon:1;Parent=LTnewLM_070019500.1;extra_copy_number=0 ### LTnewLM_7 . polypeptide 583446 585891 . + . ID=LTnewLM_070019500.1:pep;Derives_from=LTnewLM_070019500.1;orthologous_to=LTnewLM_020005100.1,LTnewLM_210005000.1,LTnewLM_250031500.1,LTnewLM_310044200.1,LTnewLM_310044200.2,LTnewLM_350005100.1,LTnewLM_360005100.1;ortholog_cluster=OG0000024;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_7 AUGUSTUS gene 590697 592509 0.58 - . ID=LTnewLM_070019600 LTnewLM_7 AUGUSTUS mRNA 590697 592509 0.58 - . ID=LTnewLM_070019600.1;Parent=LTnewLM_070019600 LTnewLM_7 AUGUSTUS CDS 590697 591061 0.97 - 2 ID=LTnewLM_070019600.1:CDS:1;Parent=LTnewLM_070019600.1 LTnewLM_7 AUGUSTUS CDS 592422 592509 0.58 - 0 ID=LTnewLM_070019600.1:CDS:2;Parent=LTnewLM_070019600.1 ### LTnewLM_7 . polypeptide 590697 592509 . - . ID=LTnewLM_070019600.1:pep;Derives_from=LTnewLM_070019600.1;product=term%3Dhypothetical protein ### LTnewLM_7 . polypeptide 595014 595123 . - . ID=LTnewLM_070019700.1:pep;Derives_from=LTnewLM_070019700.1;product=term%3Dhypothetical protein ### LTnewLM_7 AUGUSTUS gene 595014 595713 0.47 - . ID=LTnewLM_070019700;fiveEndPartial=true;End_range=.,. LTnewLM_7 AUGUSTUS mRNA 595014 595713 0.47 - . ID=LTnewLM_070019700.1;Parent=LTnewLM_070019700 LTnewLM_7 AUGUSTUS CDS 595014 595123 0.71 - 2 ID=LTnewLM_070019700.1:CDS:1;Parent=LTnewLM_070019700.1 ### LTnewLM_8 AUGUSTUS gene 1 1089 0.51 + . ID=LTnewLM_080005000;fiveEndPartial=true;Start_range=.,. LTnewLM_8 AUGUSTUS mRNA 1 1089 0.51 + . ID=LTnewLM_080005000.1;Parent=LTnewLM_080005000 LTnewLM_8 AUGUSTUS CDS 662 1089 0.51 + 2 ID=LTnewLM_080005000.1:CDS:1;Parent=LTnewLM_080005000.1 ### LTnewLM_8 . contig 1 502828 . + . Name=LTnewLM_CTG000042 LTnewLM_8 . polypeptide 662 1089 . + . ID=LTnewLM_080005000.1:pep;Derives_from=LTnewLM_080005000.1;orthologous_to=LTnewLM_030005000.1,LTnewLM_050005000.1,LTnewLM_100005000.1,LTnewLM_160005000.1,LTnewLM_170005000.1,LTnewLM_200023700.1,LTnewLM_230005000.1,LTnewLM_250005000.1,LTnewLM_260033700.1,LTnewLM_290037300.1,LTnewLM_300045700.1,LTnewLM_310005000.1,LTnewLM_340005000.1,LTnewLM_350005000.1;ortholog_cluster=OG0000008;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 4507 8103 1 + . ID=LTnewLM_080005100 LTnewLM_8 AUGUSTUS mRNA 4507 8103 1 + . ID=LTnewLM_080005100.1;Parent=LTnewLM_080005100 LTnewLM_8 AUGUSTUS CDS 4507 8103 1 + 0 ID=LTnewLM_080005100.1:CDS:1;Parent=LTnewLM_080005100.1 ### LTnewLM_8 . polypeptide 4507 8103 . + . ID=LTnewLM_080005100.1:pep;Derives_from=LTnewLM_080005100.1;orthologous_to=LmjF.08.0010_mRNA;ortholog_cluster=OG0007194;product=term%3DAAA ATPase domain/RecF/RecN/SMC N terminal domain/AAA domain/SMC proteins Flexible Hinge Domain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13175|Pfam:PF02463|Pfam:PF13476|Pfam:PF06470;Ontology_term=GO:0051276,GO:0005515,GO:0005694,GO:0005524 LTnewLM_8 Pfam protein_match 4507 5511 . + . Parent=LTnewLM_080005100.1:pep;Name=PF13175;signature_desc=AAA ATPase domain LTnewLM_8 Pfam protein_match 4510 8007 . + . Parent=LTnewLM_080005100.1:pep;Name=PF02463;signature_desc=RecF/RecN/SMC N terminal domain LTnewLM_8 Pfam protein_match 4522 5253 . + . Parent=LTnewLM_080005100.1:pep;Name=PF13476;signature_desc=AAA domain LTnewLM_8 Pfam protein_match 6100 6426 . + . Parent=LTnewLM_080005100.1:pep;Name=PF06470;signature_desc=SMC proteins Flexible Hinge Domain;Ontology_term=GO:0005515,GO:0005524,GO:0051276,GO:0005694 ### LTnewLM_8 AUGUSTUS gene 9109 9930 1 + . ID=LTnewLM_080005200 LTnewLM_8 AUGUSTUS mRNA 9109 9930 1 + . ID=LTnewLM_080005200.1;Parent=LTnewLM_080005200 LTnewLM_8 AUGUSTUS CDS 9109 9930 1 + 0 ID=LTnewLM_080005200.1:CDS:1;Parent=LTnewLM_080005200.1 ### LTnewLM_8 . polypeptide 9109 9930 . + . ID=LTnewLM_080005200.1:pep;Derives_from=LTnewLM_080005200.1;orthologous_to=LmjF.08.0020_mRNA;ortholog_cluster=OG0007195;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 10969 11616 1 + . ID=LTnewLM_080005300 LTnewLM_8 AUGUSTUS mRNA 10969 11616 1 + . ID=LTnewLM_080005300.1;Parent=LTnewLM_080005300 LTnewLM_8 AUGUSTUS CDS 10969 11616 1 + 0 ID=LTnewLM_080005300.1:CDS:1;Parent=LTnewLM_080005300.1 ### LTnewLM_8 . polypeptide 10969 11616 . + . ID=LTnewLM_080005300.1:pep;Derives_from=LTnewLM_080005300.1;orthologous_to=LmjF.08.0030_mRNA;ortholog_cluster=OG0007196;product=term%3DSynaptobrevin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00957;Ontology_term=GO:0016021,GO:0016192 LTnewLM_8 Pfam protein_match 11326 11589 . + . Parent=LTnewLM_080005300.1:pep;Name=PF00957;signature_desc=Synaptobrevin;Ontology_term=GO:0016192,GO:0016021 ### LTnewLM_8 AUGUSTUS gene 13369 14058 1 + . ID=LTnewLM_080005400 LTnewLM_8 AUGUSTUS mRNA 13369 14058 1 + . ID=LTnewLM_080005400.1;Parent=LTnewLM_080005400 LTnewLM_8 AUGUSTUS CDS 13369 14058 1 + 0 ID=LTnewLM_080005400.1:CDS:1;Parent=LTnewLM_080005400.1 ### LTnewLM_8 . polypeptide 13369 14058 . + . ID=LTnewLM_080005400.1:pep;Derives_from=LTnewLM_080005400.1;orthologous_to=LmjF.08.0040_mRNA;ortholog_cluster=OG0007197;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 15139 15366 1 + . ID=LTnewLM_080005500 LTnewLM_8 AUGUSTUS mRNA 15139 15366 1 + . ID=LTnewLM_080005500.1;Parent=LTnewLM_080005500 LTnewLM_8 AUGUSTUS CDS 15139 15366 1 + 0 ID=LTnewLM_080005500.1:CDS:1;Parent=LTnewLM_080005500.1 ### LTnewLM_8 . polypeptide 15139 15366 . + . ID=LTnewLM_080005500.1:pep;Derives_from=LTnewLM_080005500.1;orthologous_to=LmjF.08.0050_mRNA;ortholog_cluster=OG0007198;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 16924 17481 1 + . ID=LTnewLM_080005600 LTnewLM_8 AUGUSTUS mRNA 16924 17481 1 + . ID=LTnewLM_080005600.1;Parent=LTnewLM_080005600 LTnewLM_8 AUGUSTUS CDS 16924 17481 1 + 0 ID=LTnewLM_080005600.1:CDS:1;Parent=LTnewLM_080005600.1 ### LTnewLM_8 . polypeptide 16924 17481 . + . ID=LTnewLM_080005600.1:pep;Derives_from=LTnewLM_080005600.1;orthologous_to=LmjF.08.0060_mRNA;ortholog_cluster=OG0007199;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_8 Pfam protein_match 16933 17472 . + . Parent=LTnewLM_080005600.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_8 AUGUSTUS gene 18084 19973 1 + . ID=LTnewLM_080005700 LTnewLM_8 AUGUSTUS mRNA 18084 19973 1 + . ID=LTnewLM_080005700.1;Parent=LTnewLM_080005700 LTnewLM_8 AUGUSTUS CDS 18084 19973 1 + 0 ID=LTnewLM_080005700.1:CDS:1;Parent=LTnewLM_080005700.1 ### LTnewLM_8 . polypeptide 18084 19973 . + . ID=LTnewLM_080005700.1:pep;Derives_from=LTnewLM_080005700.1;orthologous_to=LmjF.08.0070_mRNA;ortholog_cluster=OG0007200;product=term%3DASCH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF04266 LTnewLM_8 Pfam protein_match 19551 19832 . + . Parent=LTnewLM_080005700.1:pep;Name=PF04266;signature_desc=ASCH domain ### LTnewLM_8 AUGUSTUS gene 20867 23467 1 + . ID=LTnewLM_080005800 LTnewLM_8 AUGUSTUS mRNA 20867 23467 1 + . ID=LTnewLM_080005800.1;Parent=LTnewLM_080005800 LTnewLM_8 AUGUSTUS CDS 20867 23467 1 + 0 ID=LTnewLM_080005800.1:CDS:1;Parent=LTnewLM_080005800.1 ### LTnewLM_8 . polypeptide 20867 23467 . + . ID=LTnewLM_080005800.1:pep;Derives_from=LTnewLM_080005800.1;orthologous_to=LmjF.08.0080_mRNA;ortholog_cluster=OG0007201;product=term%3DDEAD/DEAH box helicase/Type III restriction enzyme%2C res subunit/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF04851|Pfam:PF00271;Ontology_term=GO:0016787,GO:0003677,GO:0003676,GO:0005524 LTnewLM_8 Pfam protein_match 21623 22132 . + . Parent=LTnewLM_080005800.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_8 Pfam protein_match 21665 22102 . + . Parent=LTnewLM_080005800.1:pep;Name=PF04851;signature_desc=Type III restriction enzyme%2C res subunit;Ontology_term=GO:0003677,GO:0005524,GO:0016787 LTnewLM_8 Pfam protein_match 22292 22621 . + . Parent=LTnewLM_080005800.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain ### LTnewLM_8 AUGUSTUS gene 24712 28113 1 + . ID=LTnewLM_080005900 LTnewLM_8 AUGUSTUS mRNA 24712 28113 1 + . ID=LTnewLM_080005900.1;Parent=LTnewLM_080005900 LTnewLM_8 AUGUSTUS CDS 24712 28113 1 + 0 ID=LTnewLM_080005900.1:CDS:1;Parent=LTnewLM_080005900.1 ### LTnewLM_8 . polypeptide 24712 28113 . + . ID=LTnewLM_080005900.1:pep;Derives_from=LTnewLM_080005900.1;orthologous_to=LmjF.08.0090_mRNA;ortholog_cluster=OG0007202;product=term%3DAdaptin N terminal region/non-SMC mitotic condensation complex subunit 1%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01602|Pfam:PF12717;Ontology_term=GO:0016192,GO:0006886,GO:0030117 LTnewLM_8 Pfam protein_match 24808 26289 . + . Parent=LTnewLM_080005900.1:pep;Name=PF01602;signature_desc=Adaptin N terminal region;Ontology_term=GO:0006886,GO:0016192,GO:0030117 LTnewLM_8 Pfam protein_match 25081 25521 . + . Parent=LTnewLM_080005900.1:pep;Name=PF12717;signature_desc=non-SMC mitotic condensation complex subunit 1 ### LTnewLM_8 . polypeptide 29721 30433 . + . ID=LTnewLM_080006000.1:pep;Derives_from=LTnewLM_080006000.1;orthologous_to=LTnewLM_080006000.2,LmjF.08.0100_mRNA;ortholog_cluster=OG0000499;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 29721 31385 1.91 + . ID=LTnewLM_080006000 LTnewLM_8 AUGUSTUS mRNA 29721 30433 0.91 + . ID=LTnewLM_080006000.1;Parent=LTnewLM_080006000 LTnewLM_8 AUGUSTUS CDS 29721 30332 0.95 + 0 ID=LTnewLM_080006000.1:CDS:1;Parent=LTnewLM_080006000.1 LTnewLM_8 AUGUSTUS CDS 30428 30433 0.95 + 0 ID=LTnewLM_080006000.1:CDS:2;Parent=LTnewLM_080006000.1 LTnewLM_8 AUGUSTUS mRNA 29721 31385 1 + . ID=LTnewLM_080006000.2;Parent=LTnewLM_080006000 LTnewLM_8 AUGUSTUS CDS 29721 31385 1 + 0 ID=LTnewLM_080006000.2:CDS:1;Parent=LTnewLM_080006000.2 ### LTnewLM_8 . polypeptide 29721 31385 . + . ID=LTnewLM_080006000.2:pep;Derives_from=LTnewLM_080006000.2;orthologous_to=LTnewLM_080006000.1,LmjF.08.0100_mRNA;ortholog_cluster=OG0000499;product=term%3DDual specificity phosphatase%2C catalytic domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00782;Ontology_term=GO:0008138,GO:0006470 LTnewLM_8 Pfam protein_match 30201 30617 . + . Parent=LTnewLM_080006000.2:pep;Name=PF00782;signature_desc=Dual specificity phosphatase%2C catalytic domain;Ontology_term=GO:0008138,GO:0006470 ### LTnewLM_8 AUGUSTUS gene 32456 34726 1 + . ID=LTnewLM_080006100 LTnewLM_8 AUGUSTUS mRNA 32456 34726 1 + . ID=LTnewLM_080006100.1;Parent=LTnewLM_080006100 LTnewLM_8 AUGUSTUS CDS 32456 34726 1 + 0 ID=LTnewLM_080006100.1:CDS:1;Parent=LTnewLM_080006100.1 ### LTnewLM_8 . polypeptide 32456 34726 . + . ID=LTnewLM_080006100.1:pep;Derives_from=LTnewLM_080006100.1;orthologous_to=LmjF.08.0110_mRNA;ortholog_cluster=OG0007203;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 36571 37383 1 + . ID=LTnewLM_080006200 LTnewLM_8 AUGUSTUS mRNA 36571 37383 1 + . ID=LTnewLM_080006200.1;Parent=LTnewLM_080006200 LTnewLM_8 AUGUSTUS CDS 36571 37383 1 + 0 ID=LTnewLM_080006200.1:CDS:1;Parent=LTnewLM_080006200.1 ### LTnewLM_8 . polypeptide 36571 37383 . + . ID=LTnewLM_080006200.1:pep;Derives_from=LTnewLM_080006200.1;orthologous_to=LmjF.08.0120_mRNA;ortholog_cluster=OG0007204;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 38786 42238 1 + . ID=LTnewLM_080006300 LTnewLM_8 AUGUSTUS mRNA 38786 42238 1 + . ID=LTnewLM_080006300.1;Parent=LTnewLM_080006300 LTnewLM_8 AUGUSTUS CDS 38786 42238 1 + 0 ID=LTnewLM_080006300.1:CDS:1;Parent=LTnewLM_080006300.1 ### LTnewLM_8 . polypeptide 38786 42238 . + . ID=LTnewLM_080006300.1:pep;Derives_from=LTnewLM_080006300.1;orthologous_to=LmjF.08.0130_mRNA;ortholog_cluster=OG0007205;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 45026 46783 1 + . ID=LTnewLM_080006400 LTnewLM_8 AUGUSTUS mRNA 45026 46783 1 + . ID=LTnewLM_080006400.1;Parent=LTnewLM_080006400 LTnewLM_8 AUGUSTUS CDS 45026 46783 1 + 0 ID=LTnewLM_080006400.1:CDS:1;Parent=LTnewLM_080006400.1 ### LTnewLM_8 . polypeptide 45026 46783 . + . ID=LTnewLM_080006400.1:pep;Derives_from=LTnewLM_080006400.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 47685 51467 1 + . ID=LTnewLM_080006500 LTnewLM_8 AUGUSTUS mRNA 47685 51467 1 + . ID=LTnewLM_080006500.1;Parent=LTnewLM_080006500 LTnewLM_8 AUGUSTUS CDS 47685 51467 1 + 0 ID=LTnewLM_080006500.1:CDS:1;Parent=LTnewLM_080006500.1 ### LTnewLM_8 . polypeptide 47685 51467 . + . ID=LTnewLM_080006500.1:pep;Derives_from=LTnewLM_080006500.1;orthologous_to=LmjF.08.0140_mRNA;ortholog_cluster=OG0007206;product=term%3DERCC4 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02732;Ontology_term=GO:0004518,GO:0003677 LTnewLM_8 Pfam protein_match 50796 51149 . + . Parent=LTnewLM_080006500.1:pep;Name=PF02732;signature_desc=ERCC4 domain;Ontology_term=GO:0003677,GO:0004518 ### LTnewLM_8 AUGUSTUS gene 52467 54026 1 + . ID=LTnewLM_080006600 LTnewLM_8 AUGUSTUS mRNA 52467 54026 1 + . ID=LTnewLM_080006600.1;Parent=LTnewLM_080006600 LTnewLM_8 AUGUSTUS CDS 52467 54026 1 + 0 ID=LTnewLM_080006600.1:CDS:1;Parent=LTnewLM_080006600.1 ### LTnewLM_8 . polypeptide 52467 54026 . + . ID=LTnewLM_080006600.1:pep;Derives_from=LTnewLM_080006600.1;orthologous_to=LmjF.08.0150_mRNA;ortholog_cluster=OG0007207;product=term%3DGPI-GlcNAc transferase complex%2C PIG-H component%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10181;Ontology_term=GO:0017176 LTnewLM_8 Pfam protein_match 53601 53789 . + . Parent=LTnewLM_080006600.1:pep;Name=PF10181;signature_desc=GPI-GlcNAc transferase complex%2C PIG-H component;Ontology_term=GO:0017176 ### LTnewLM_8 AUGUSTUS gene 55225 55926 1 + . ID=LTnewLM_080006700 LTnewLM_8 AUGUSTUS mRNA 55225 55926 1 + . ID=LTnewLM_080006700.1;Parent=LTnewLM_080006700 LTnewLM_8 AUGUSTUS CDS 55225 55926 1 + 0 ID=LTnewLM_080006700.1:CDS:1;Parent=LTnewLM_080006700.1 ### LTnewLM_8 . polypeptide 55225 55926 . + . ID=LTnewLM_080006700.1:pep;Derives_from=LTnewLM_080006700.1;orthologous_to=LmjF.08.0160_mRNA;ortholog_cluster=OG0007208;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 62103 64052 1 + . ID=LTnewLM_080006800 LTnewLM_8 AUGUSTUS mRNA 62103 64052 1 + . ID=LTnewLM_080006800.1;Parent=LTnewLM_080006800 LTnewLM_8 AUGUSTUS CDS 62103 64052 1 + 0 ID=LTnewLM_080006800.1:CDS:1;Parent=LTnewLM_080006800.1 ### LTnewLM_8 . polypeptide 62103 64052 . + . ID=LTnewLM_080006800.1:pep;Derives_from=LTnewLM_080006800.1;orthologous_to=LmjF.08.0170_mRNA;ortholog_cluster=OG0007209;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 70035 70919 1 + . ID=LTnewLM_080006900 LTnewLM_8 AUGUSTUS mRNA 70035 70919 1 + . ID=LTnewLM_080006900.1;Parent=LTnewLM_080006900 LTnewLM_8 AUGUSTUS CDS 70035 70919 1 + 0 ID=LTnewLM_080006900.1:CDS:1;Parent=LTnewLM_080006900.1 ### LTnewLM_8 . polypeptide 70035 70919 . + . ID=LTnewLM_080006900.1:pep;Derives_from=LTnewLM_080006900.1;orthologous_to=LmjF.08.0180_mRNA;ortholog_cluster=OG0007210;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 72024 74816 1 + . ID=LTnewLM_080007000 LTnewLM_8 AUGUSTUS mRNA 72024 74816 1 + . ID=LTnewLM_080007000.1;Parent=LTnewLM_080007000 LTnewLM_8 AUGUSTUS CDS 72024 74816 1 + 0 ID=LTnewLM_080007000.1:CDS:1;Parent=LTnewLM_080007000.1 ### LTnewLM_8 . polypeptide 72024 74816 . + . ID=LTnewLM_080007000.1:pep;Derives_from=LTnewLM_080007000.1;orthologous_to=LmjF.08.0190_mRNA;ortholog_cluster=OG0007211;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 76318 78279 1 + . ID=LTnewLM_080007100 LTnewLM_8 AUGUSTUS mRNA 76318 78279 1 + . ID=LTnewLM_080007100.1;Parent=LTnewLM_080007100 LTnewLM_8 AUGUSTUS CDS 76318 78279 1 + 0 ID=LTnewLM_080007100.1:CDS:1;Parent=LTnewLM_080007100.1 ### LTnewLM_8 . polypeptide 76318 78279 . + . ID=LTnewLM_080007100.1:pep;Derives_from=LTnewLM_080007100.1;orthologous_to=LmjF.08.0200_mRNA;ortholog_cluster=OG0007212;product=term%3DEndonuclease/Exonuclease/phosphatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03372 LTnewLM_8 Pfam protein_match 76366 77193 . + . Parent=LTnewLM_080007100.1:pep;Name=PF03372;signature_desc=Endonuclease/Exonuclease/phosphatase family ### LTnewLM_8 AUGUSTUS gene 80081 81586 1 + . ID=LTnewLM_080007200 LTnewLM_8 AUGUSTUS mRNA 80081 81586 1 + . ID=LTnewLM_080007200.1;Parent=LTnewLM_080007200 LTnewLM_8 AUGUSTUS CDS 80081 81586 1 + 0 ID=LTnewLM_080007200.1:CDS:1;Parent=LTnewLM_080007200.1 ### LTnewLM_8 . polypeptide 80081 81586 . + . ID=LTnewLM_080007200.1:pep;Derives_from=LTnewLM_080007200.1;orthologous_to=LmjF.08.0210_mRNA;ortholog_cluster=OG0007213;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 82148 85426 1 + . ID=LTnewLM_080007300 LTnewLM_8 AUGUSTUS mRNA 82148 85426 1 + . ID=LTnewLM_080007300.1;Parent=LTnewLM_080007300 LTnewLM_8 AUGUSTUS CDS 82148 85426 1 + 0 ID=LTnewLM_080007300.1:CDS:1;Parent=LTnewLM_080007300.1 ### LTnewLM_8 . polypeptide 82148 85426 . + . ID=LTnewLM_080007300.1:pep;Derives_from=LTnewLM_080007300.1;orthologous_to=LmjF.08.0220_mRNA;ortholog_cluster=OG0007214;product=term%3DThiF family/Ubiquitin/SUMO-activating enzyme ubiquitin-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00899|Pfam:PF14732;Ontology_term=GO:0008641 LTnewLM_8 Pfam protein_match 82961 84415 . + . Parent=LTnewLM_080007300.1:pep;Name=PF00899;signature_desc=ThiF family;Ontology_term=GO:0008641 LTnewLM_8 Pfam protein_match 84824 85102 . + . Parent=LTnewLM_080007300.1:pep;Name=PF14732;signature_desc=Ubiquitin/SUMO-activating enzyme ubiquitin-like domain ### LTnewLM_8 AUGUSTUS gene 86452 88020 1 + . ID=LTnewLM_080007400 LTnewLM_8 AUGUSTUS mRNA 86452 88020 1 + . ID=LTnewLM_080007400.1;Parent=LTnewLM_080007400 LTnewLM_8 AUGUSTUS CDS 86452 88020 1 + 0 ID=LTnewLM_080007400.1:CDS:1;Parent=LTnewLM_080007400.1 ### LTnewLM_8 . polypeptide 86452 88020 . + . ID=LTnewLM_080007400.1:pep;Derives_from=LTnewLM_080007400.1;orthologous_to=LmjF.08.0230_mRNA;ortholog_cluster=OG0007215;product=term%3DABC1 atypical kinase-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03109 LTnewLM_8 Pfam protein_match 86824 87573 . + . Parent=LTnewLM_080007400.1:pep;Name=PF03109;signature_desc=ABC1 atypical kinase-like domain ### LTnewLM_8 AUGUSTUS gene 89375 90163 1 + . ID=LTnewLM_080007500 LTnewLM_8 AUGUSTUS mRNA 89375 90163 1 + . ID=LTnewLM_080007500.1;Parent=LTnewLM_080007500 LTnewLM_8 AUGUSTUS CDS 89375 90163 1 + 0 ID=LTnewLM_080007500.1:CDS:1;Parent=LTnewLM_080007500.1 ### LTnewLM_8 . polypeptide 89375 90163 . + . ID=LTnewLM_080007500.1:pep;Derives_from=LTnewLM_080007500.1;orthologous_to=LmjF.08.0240_mRNA;ortholog_cluster=OG0007216;product=term%3DRibosomal protein L9%2C N-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01281 LTnewLM_8 Pfam protein_match 89762 89854 . + . Parent=LTnewLM_080007500.1:pep;Name=PF01281;signature_desc=Ribosomal protein L9%2C N-terminal domain ### LTnewLM_8 AUGUSTUS gene 91147 91488 1 + . ID=LTnewLM_080007600 LTnewLM_8 AUGUSTUS mRNA 91147 91488 1 + . ID=LTnewLM_080007600.1;Parent=LTnewLM_080007600 LTnewLM_8 AUGUSTUS CDS 91147 91488 1 + 0 ID=LTnewLM_080007600.1:CDS:1;Parent=LTnewLM_080007600.1 ### LTnewLM_8 . polypeptide 91147 91488 . + . ID=LTnewLM_080007600.1:pep;Derives_from=LTnewLM_080007600.1;orthologous_to=LmjF.08.0250_mRNA;ortholog_cluster=OG0007217;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 92447 94477 1 + . ID=LTnewLM_080007700 LTnewLM_8 AUGUSTUS mRNA 92447 94477 1 + . ID=LTnewLM_080007700.1;Parent=LTnewLM_080007700 LTnewLM_8 AUGUSTUS CDS 92447 94477 1 + 0 ID=LTnewLM_080007700.1:CDS:1;Parent=LTnewLM_080007700.1 ### LTnewLM_8 . polypeptide 92447 94477 . + . ID=LTnewLM_080007700.1:pep;Derives_from=LTnewLM_080007700.1;orthologous_to=LmjF.08.0260_mRNA;ortholog_cluster=OG0007218;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 95822 98389 1 + . ID=LTnewLM_080007800 LTnewLM_8 AUGUSTUS mRNA 95822 98389 1 + . ID=LTnewLM_080007800.1;Parent=LTnewLM_080007800 LTnewLM_8 AUGUSTUS CDS 95822 98389 1 + 0 ID=LTnewLM_080007800.1:CDS:1;Parent=LTnewLM_080007800.1 ### LTnewLM_8 . polypeptide 95822 98389 . + . ID=LTnewLM_080007800.1:pep;Derives_from=LTnewLM_080007800.1;orthologous_to=LmjF.08.0270_mRNA;ortholog_cluster=OG0007219;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 101436 102716 1 + . ID=LTnewLM_080007900 LTnewLM_8 AUGUSTUS mRNA 101436 102716 1 + . ID=LTnewLM_080007900.1;Parent=LTnewLM_080007900 LTnewLM_8 AUGUSTUS CDS 101436 102716 1 + 0 ID=LTnewLM_080007900.1:CDS:1;Parent=LTnewLM_080007900.1 ### LTnewLM_8 . polypeptide 101436 102716 . + . ID=LTnewLM_080007900.1:pep;Derives_from=LTnewLM_080007900.1;orthologous_to=LmjF.08.0280_mRNA;ortholog_cluster=OG0007220;product=term%3DRibosomal Proteins L2%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03947;Ontology_term=GO:0006412,GO:0003735,GO:0005840 LTnewLM_8 Pfam protein_match 102195 102542 . + . Parent=LTnewLM_080007900.1:pep;Name=PF03947;signature_desc=Ribosomal Proteins L2%2C C-terminal domain;Ontology_term=GO:0003735,GO:0006412,GO:0005840 ### LTnewLM_8 AUGUSTUS gene 103452 104144 1 + . ID=LTnewLM_080008000 LTnewLM_8 AUGUSTUS mRNA 103452 104144 1 + . ID=LTnewLM_080008000.1;Parent=LTnewLM_080008000 LTnewLM_8 AUGUSTUS CDS 103452 104144 1 + 0 ID=LTnewLM_080008000.1:CDS:1;Parent=LTnewLM_080008000.1 ### LTnewLM_8 . polypeptide 103452 104144 . + . ID=LTnewLM_080008000.1:pep;Derives_from=LTnewLM_080008000.1;orthologous_to=LmjF.08.0290_mRNA;ortholog_cluster=OG0007221;product=term%3DIron/manganese superoxide dismutases%2C alpha-hairpin domain/Iron/manganese superoxide dismutases%2C C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00081|Pfam:PF02777;Ontology_term=GO:0055114,GO:0006801,GO:0046872,GO:0004784 LTnewLM_8 Pfam protein_match 103551 103796 . + . Parent=LTnewLM_080008000.1:pep;Name=PF00081;signature_desc=Iron/manganese superoxide dismutases%2C alpha-hairpin domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 LTnewLM_8 Pfam protein_match 103824 104114 . + . Parent=LTnewLM_080008000.1:pep;Name=PF02777;signature_desc=Iron/manganese superoxide dismutases%2C C-terminal domain;Ontology_term=GO:0004784,GO:0046872,GO:0006801,GO:0055114 ### LTnewLM_8 AUGUSTUS gene 106053 106811 1 + . ID=LTnewLM_080008100 LTnewLM_8 AUGUSTUS mRNA 106053 106811 1 + . ID=LTnewLM_080008100.1;Parent=LTnewLM_080008100 LTnewLM_8 AUGUSTUS CDS 106053 106811 1 + 0 ID=LTnewLM_080008100.1:CDS:1;Parent=LTnewLM_080008100.1 ### LTnewLM_8 . polypeptide 106053 106811 . + . ID=LTnewLM_080008100.1:pep;Derives_from=LTnewLM_080008100.1;orthologous_to=LmjF.08.0300_mRNA;ortholog_cluster=OG0007222;product=term%3DIsochorismatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00857;Ontology_term=GO:0003824,GO:0008152 LTnewLM_8 Pfam protein_match 106194 106628 . + . Parent=LTnewLM_080008100.1:pep;Name=PF00857;signature_desc=Isochorismatase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_8 AUGUSTUS gene 107896 108811 0.97 + . ID=LTnewLM_080008200 LTnewLM_8 AUGUSTUS mRNA 107896 108811 0.97 + . ID=LTnewLM_080008200.1;Parent=LTnewLM_080008200 LTnewLM_8 AUGUSTUS CDS 107896 108689 0.97 + 0 ID=LTnewLM_080008200.1:CDS:1;Parent=LTnewLM_080008200.1 LTnewLM_8 AUGUSTUS CDS 108799 108811 0.98 + 1 ID=LTnewLM_080008200.1:CDS:2;Parent=LTnewLM_080008200.1 ### LTnewLM_8 . polypeptide 107896 108811 . + . ID=LTnewLM_080008200.1:pep;Derives_from=LTnewLM_080008200.1;orthologous_to=LmjF.08.0310_mRNA;ortholog_cluster=OG0007223;product=term%3DIsochorismatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00857;Ontology_term=GO:0003824,GO:0008152 LTnewLM_8 Pfam protein_match 108385 108540 . + . Parent=LTnewLM_080008200.1:pep;Name=PF00857;signature_desc=Isochorismatase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_8 AUGUSTUS gene 109676 110353 1 + . ID=LTnewLM_080008300 LTnewLM_8 AUGUSTUS mRNA 109676 110353 1 + . ID=LTnewLM_080008300.1;Parent=LTnewLM_080008300 LTnewLM_8 AUGUSTUS CDS 109676 110353 1 + 0 ID=LTnewLM_080008300.1:CDS:1;Parent=LTnewLM_080008300.1 ### LTnewLM_8 . polypeptide 109676 110353 . + . ID=LTnewLM_080008300.1:pep;Derives_from=LTnewLM_080008300.1;orthologous_to=LmjF.08.0320_mRNA;ortholog_cluster=OG0007224;product=term%3DIsochorismatase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00857;Ontology_term=GO:0003824,GO:0008152 LTnewLM_8 Pfam protein_match 109751 110191 . + . Parent=LTnewLM_080008300.1:pep;Name=PF00857;signature_desc=Isochorismatase family;Ontology_term=GO:0003824,GO:0008152 ### LTnewLM_8 AUGUSTUS gene 111401 111688 1 + . ID=LTnewLM_080008400 LTnewLM_8 AUGUSTUS mRNA 111401 111688 1 + . ID=LTnewLM_080008400.1;Parent=LTnewLM_080008400 LTnewLM_8 AUGUSTUS CDS 111401 111688 1 + 0 ID=LTnewLM_080008400.1:CDS:1;Parent=LTnewLM_080008400.1 ### LTnewLM_8 . polypeptide 111401 111688 . + . ID=LTnewLM_080008400.1:pep;Derives_from=LTnewLM_080008400.1;orthologous_to=LmjF.08.0330_mRNA;ortholog_cluster=OG0007225;product=term%3DTim10/DDP family zinc finger containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02953 LTnewLM_8 Pfam protein_match 111413 111625 . + . Parent=LTnewLM_080008400.1:pep;Name=PF02953;signature_desc=Tim10/DDP family zinc finger ### LTnewLM_8 Liftoff gene 112404 127337 . + . ID=LTnewLM_080008500;coverage=0.997;sequence_ID=0.914;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.08.0340_0 LTnewLM_8 Liftoff mRNA 112404 127337 . + . ID=LTnewLM_080008500.1;Parent=LTnewLM_080008500;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 112404 127337 . + 0 ID=LTnewLM_080008500.1:CDS:1;Parent=LTnewLM_080008500.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 112404 127337 . + . ID=LTnewLM_080008500.1:pep;Derives_from=LTnewLM_080008500.1;orthologous_to=LmjF.08.0340_mRNA;ortholog_cluster=OG0007226;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . pseudogene 128589 133455 . + . ID=LTnewLM_080008600:pseudogene;coverage=0.991;sequence_ID=0.882;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.0350_0;has_internal_stop=true LTnewLM_8 . pseudogenic_transcript 128589 133455 . + . ID=LTnewLM_080008600.1;Parent=LTnewLM_080008600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_8 . pseudogenic_exon 128589 133455 . + . ID=LTnewLM_080008600.1:pseudogenic_exon:1;Parent=LTnewLM_080008600.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 128589 133455 . + . ID=LTnewLM_080008600.1:pep;Derives_from=LTnewLM_080008600.1;orthologous_to=LmjF.08.0350_mRNA;ortholog_cluster=OG0007728;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 136088 137818 1 + . ID=LTnewLM_080008700 LTnewLM_8 AUGUSTUS mRNA 136088 137818 1 + . ID=LTnewLM_080008700.1;Parent=LTnewLM_080008700 LTnewLM_8 AUGUSTUS CDS 136088 137818 1 + 0 ID=LTnewLM_080008700.1:CDS:1;Parent=LTnewLM_080008700.1 ### LTnewLM_8 . polypeptide 136088 137818 . + . ID=LTnewLM_080008700.1:pep;Derives_from=LTnewLM_080008700.1;orthologous_to=LmjF.08.0360_mRNA;ortholog_cluster=OG0007227;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 139274 139936 1 + . ID=LTnewLM_080008800 LTnewLM_8 AUGUSTUS mRNA 139274 139936 1 + . ID=LTnewLM_080008800.1;Parent=LTnewLM_080008800 LTnewLM_8 AUGUSTUS CDS 139274 139936 1 + 0 ID=LTnewLM_080008800.1:CDS:1;Parent=LTnewLM_080008800.1 ### LTnewLM_8 . polypeptide 139274 139936 . + . ID=LTnewLM_080008800.1:pep;Derives_from=LTnewLM_080008800.1;orthologous_to=LmjF.08.0370_mRNA;ortholog_cluster=OG0007228;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 141036 146768 1 + . ID=LTnewLM_080008900 LTnewLM_8 AUGUSTUS mRNA 141036 146768 1 + . ID=LTnewLM_080008900.1;Parent=LTnewLM_080008900 LTnewLM_8 AUGUSTUS CDS 141036 146768 1 + 0 ID=LTnewLM_080008900.1:CDS:1;Parent=LTnewLM_080008900.1 ### LTnewLM_8 . polypeptide 141036 146768 . + . ID=LTnewLM_080008900.1:pep;Derives_from=LTnewLM_080008900.1;orthologous_to=LmjF.08.0380_mRNA;ortholog_cluster=OG0007229;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 147961 154182 1 + . ID=LTnewLM_080009000 LTnewLM_8 AUGUSTUS mRNA 147961 154182 1 + . ID=LTnewLM_080009000.1;Parent=LTnewLM_080009000 LTnewLM_8 AUGUSTUS CDS 147961 148302 1 + 0 ID=LTnewLM_080009000.1:CDS:1;Parent=LTnewLM_080009000.1 LTnewLM_8 AUGUSTUS CDS 148396 154182 1 + 0 ID=LTnewLM_080009000.1:CDS:2;Parent=LTnewLM_080009000.1 ### LTnewLM_8 . polypeptide 147961 154182 . + . ID=LTnewLM_080009000.1:pep;Derives_from=LTnewLM_080009000.1;orthologous_to=LmjF.08.0390_mRNA;ortholog_cluster=OG0007230;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 155145 158713 0.67 + . ID=LTnewLM_080009100 LTnewLM_8 AUGUSTUS mRNA 155145 158713 0.67 + . ID=LTnewLM_080009100.1;Parent=LTnewLM_080009100 LTnewLM_8 AUGUSTUS CDS 155145 155614 0.94 + 0 ID=LTnewLM_080009100.1:CDS:1;Parent=LTnewLM_080009100.1 LTnewLM_8 AUGUSTUS CDS 155683 158713 0.67 + 1 ID=LTnewLM_080009100.1:CDS:2;Parent=LTnewLM_080009100.1 ### LTnewLM_8 . polypeptide 155145 158713 . + . ID=LTnewLM_080009100.1:pep;Derives_from=LTnewLM_080009100.1;orthologous_to=LmjF.08.0400_mRNA;ortholog_cluster=OG0007231;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 160087 164298 1 + . ID=LTnewLM_080009200 LTnewLM_8 AUGUSTUS mRNA 160087 164298 1 + . ID=LTnewLM_080009200.1;Parent=LTnewLM_080009200 LTnewLM_8 AUGUSTUS CDS 160087 164298 1 + 0 ID=LTnewLM_080009200.1:CDS:1;Parent=LTnewLM_080009200.1 ### LTnewLM_8 . polypeptide 160087 164298 . + . ID=LTnewLM_080009200.1:pep;Derives_from=LTnewLM_080009200.1;orthologous_to=LmjF.08.0410_mRNA;ortholog_cluster=OG0007232;product=term%3DWD domain%2C G-beta repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00400;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 161905 162018 . + . Parent=LTnewLM_080009200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 162061 162165 . + . Parent=LTnewLM_080009200.1:pep;Name=PF00400;signature_desc=WD domain%2C G-beta repeat;Ontology_term=GO:0005515 ### LTnewLM_8 AUGUSTUS gene 166931 172869 0.44 + . ID=LTnewLM_080009300 LTnewLM_8 AUGUSTUS mRNA 166931 172869 0.44 + . ID=LTnewLM_080009300.1;Parent=LTnewLM_080009300 LTnewLM_8 AUGUSTUS CDS 166931 169647 0.71 + 0 ID=LTnewLM_080009300.1:CDS:1;Parent=LTnewLM_080009300.1 LTnewLM_8 AUGUSTUS CDS 169698 172869 0.44 + 1 ID=LTnewLM_080009300.1:CDS:2;Parent=LTnewLM_080009300.1 ### LTnewLM_8 . polypeptide 166931 172869 . + . ID=LTnewLM_080009300.1:pep;Derives_from=LTnewLM_080009300.1;orthologous_to=LmjF.08.0420_mRNA;ortholog_cluster=OG0007233;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 174250 177024 1 + . ID=LTnewLM_080009400 LTnewLM_8 AUGUSTUS mRNA 174250 177024 1 + . ID=LTnewLM_080009400.1;Parent=LTnewLM_080009400 LTnewLM_8 AUGUSTUS CDS 174250 177024 1 + 0 ID=LTnewLM_080009400.1:CDS:1;Parent=LTnewLM_080009400.1 ### LTnewLM_8 . polypeptide 174250 177024 . + . ID=LTnewLM_080009400.1:pep;Derives_from=LTnewLM_080009400.1;orthologous_to=LmjF.08.0430_mRNA;ortholog_cluster=OG0007234;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 178311 185660 1 + . ID=LTnewLM_080009500 LTnewLM_8 AUGUSTUS mRNA 178311 185660 1 + . ID=LTnewLM_080009500.1;Parent=LTnewLM_080009500 LTnewLM_8 AUGUSTUS CDS 178311 185660 1 + 0 ID=LTnewLM_080009500.1:CDS:1;Parent=LTnewLM_080009500.1 ### LTnewLM_8 . polypeptide 178311 185660 . + . ID=LTnewLM_080009500.1:pep;Derives_from=LTnewLM_080009500.1;orthologous_to=LmjF.08.0440_mRNA;ortholog_cluster=OG0007235;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 186519 187061 1 + . ID=LTnewLM_080009600 LTnewLM_8 AUGUSTUS mRNA 186519 187061 1 + . ID=LTnewLM_080009600.1;Parent=LTnewLM_080009600 LTnewLM_8 AUGUSTUS CDS 186519 187061 1 + 0 ID=LTnewLM_080009600.1:CDS:1;Parent=LTnewLM_080009600.1 ### LTnewLM_8 . polypeptide 186519 187061 . + . ID=LTnewLM_080009600.1:pep;Derives_from=LTnewLM_080009600.1;orthologous_to=LmjF.08.0450_mRNA;ortholog_cluster=OG0007236;product=term%3DSignal peptidase%2C peptidase S26/Peptidase S24-like%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10502|Pfam:PF00717 LTnewLM_8 Pfam protein_match 186603 186803 . + . Parent=LTnewLM_080009600.1:pep;Name=PF10502;signature_desc=Signal peptidase%2C peptidase S26 LTnewLM_8 Pfam protein_match 186648 186884 . + . Parent=LTnewLM_080009600.1:pep;Name=PF00717;signature_desc=Peptidase S24-like ### LTnewLM_8 AUGUSTUS gene 188093 188980 1 + . ID=LTnewLM_080009700 LTnewLM_8 AUGUSTUS mRNA 188093 188980 1 + . ID=LTnewLM_080009700.1;Parent=LTnewLM_080009700 LTnewLM_8 AUGUSTUS CDS 188093 188980 1 + 0 ID=LTnewLM_080009700.1:CDS:1;Parent=LTnewLM_080009700.1 ### LTnewLM_8 . polypeptide 188093 188980 . + . ID=LTnewLM_080009700.1:pep;Derives_from=LTnewLM_080009700.1;orthologous_to=LmjF.08.0460_mRNA;ortholog_cluster=OG0007237;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 191948 192301 1 + . ID=LTnewLM_080009800 LTnewLM_8 AUGUSTUS mRNA 191948 192301 1 + . ID=LTnewLM_080009800.1;Parent=LTnewLM_080009800 LTnewLM_8 AUGUSTUS CDS 191948 192301 1 + 0 ID=LTnewLM_080009800.1:CDS:1;Parent=LTnewLM_080009800.1 ### LTnewLM_8 . polypeptide 191948 192301 . + . ID=LTnewLM_080009800.1:pep;Derives_from=LTnewLM_080009800.1;orthologous_to=LmjF.08.0470_mRNA;ortholog_cluster=OG0007238;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 192053 192262 . + . Parent=LTnewLM_080009800.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_8 Pfam protein_match 192062 192268 . + . Parent=LTnewLM_080009800.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 ### LTnewLM_8 AUGUSTUS gene 194966 195814 1 + . ID=LTnewLM_080009900 LTnewLM_8 AUGUSTUS mRNA 194966 195814 1 + . ID=LTnewLM_080009900.1;Parent=LTnewLM_080009900 LTnewLM_8 AUGUSTUS CDS 194966 195814 1 + 0 ID=LTnewLM_080009900.1:CDS:1;Parent=LTnewLM_080009900.1 ### LTnewLM_8 . polypeptide 194966 195814 . + . ID=LTnewLM_080009900.1:pep;Derives_from=LTnewLM_080009900.1;orthologous_to=LmjF.08.0480_mRNA;ortholog_cluster=OG0007239;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 196746 198245 1 + . ID=LTnewLM_080010000 LTnewLM_8 AUGUSTUS mRNA 196746 198245 1 + . ID=LTnewLM_080010000.1;Parent=LTnewLM_080010000 LTnewLM_8 AUGUSTUS CDS 196746 198245 1 + 0 ID=LTnewLM_080010000.1:CDS:1;Parent=LTnewLM_080010000.1 ### LTnewLM_8 . polypeptide 196746 198245 . + . ID=LTnewLM_080010000.1:pep;Derives_from=LTnewLM_080010000.1;orthologous_to=LmjF.08.0490_mRNA;ortholog_cluster=OG0007240;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 199076 200101 1 + . ID=LTnewLM_080010100 LTnewLM_8 AUGUSTUS mRNA 199076 200101 1 + . ID=LTnewLM_080010100.1;Parent=LTnewLM_080010100 LTnewLM_8 AUGUSTUS CDS 199076 200101 1 + 0 ID=LTnewLM_080010100.1:CDS:1;Parent=LTnewLM_080010100.1 ### LTnewLM_8 . polypeptide 199076 200101 . + . ID=LTnewLM_080010100.1:pep;Derives_from=LTnewLM_080010100.1;orthologous_to=LmjF.08.0500_mRNA;ortholog_cluster=OG0007241;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 200781 203303 1 + . ID=LTnewLM_080010200 LTnewLM_8 AUGUSTUS mRNA 200781 203303 1 + . ID=LTnewLM_080010200.1;Parent=LTnewLM_080010200 LTnewLM_8 AUGUSTUS CDS 200781 203303 1 + 0 ID=LTnewLM_080010200.1:CDS:1;Parent=LTnewLM_080010200.1 ### LTnewLM_8 . polypeptide 200781 203303 . + . ID=LTnewLM_080010200.1:pep;Derives_from=LTnewLM_080010200.1;orthologous_to=LmjF.08.0510_mRNA;ortholog_cluster=OG0007242;product=term%3DN-terminal domain of ribose phosphate pyrophosphokinase/Phosphoribosyl synthetase-associated domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13793|Pfam:PF14572;Ontology_term=GO:0000287,GO:0009165,GO:0004749 LTnewLM_8 Pfam protein_match 201795 202085 . + . Parent=LTnewLM_080010200.1:pep;Name=PF13793;signature_desc=N-terminal domain of ribose phosphate pyrophosphokinase LTnewLM_8 Pfam protein_match 202929 203288 . + . Parent=LTnewLM_080010200.1:pep;Name=PF14572;signature_desc=Phosphoribosyl synthetase-associated domain;Ontology_term=GO:0000287,GO:0004749,GO:0009165 ### LTnewLM_8 AUGUSTUS gene 205336 212307 1 + . ID=LTnewLM_080010300 LTnewLM_8 AUGUSTUS mRNA 205336 212307 1 + . ID=LTnewLM_080010300.1;Parent=LTnewLM_080010300 LTnewLM_8 AUGUSTUS CDS 205336 212307 1 + 0 ID=LTnewLM_080010300.1:CDS:1;Parent=LTnewLM_080010300.1 ### LTnewLM_8 . polypeptide 205336 212307 . + . ID=LTnewLM_080010300.1:pep;Derives_from=LTnewLM_080010300.1;orthologous_to=LmjF.08.0520_mRNA;ortholog_cluster=OG0007243;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 212818 218737 0.48 + . ID=LTnewLM_080010400 LTnewLM_8 AUGUSTUS mRNA 212818 218737 0.48 + . ID=LTnewLM_080010400.1;Parent=LTnewLM_080010400 LTnewLM_8 AUGUSTUS CDS 212818 214369 0.48 + 0 ID=LTnewLM_080010400.1:CDS:1;Parent=LTnewLM_080010400.1 LTnewLM_8 AUGUSTUS CDS 214443 218737 0.67 + 2 ID=LTnewLM_080010400.1:CDS:2;Parent=LTnewLM_080010400.1 ### LTnewLM_8 . polypeptide 212818 218737 . + . ID=LTnewLM_080010400.1:pep;Derives_from=LTnewLM_080010400.1;orthologous_to=LmjF.08.0530_mRNA;ortholog_cluster=OG0007244;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_8 Pfam protein_match 214093 214293 . + . Parent=LTnewLM_080010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 217309 218070 . + . Parent=LTnewLM_080010400.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 LTnewLM_8 Pfam protein_match 217897 218079 . + . Parent=LTnewLM_080010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 218239 218583 . + . Parent=LTnewLM_080010400.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 ### LTnewLM_8 AUGUSTUS gene 219339 220397 1 + . ID=LTnewLM_080010500 LTnewLM_8 AUGUSTUS mRNA 219339 220397 1 + . ID=LTnewLM_080010500.1;Parent=LTnewLM_080010500 LTnewLM_8 AUGUSTUS CDS 219339 220397 1 + 0 ID=LTnewLM_080010500.1:CDS:1;Parent=LTnewLM_080010500.1 ### LTnewLM_8 . polypeptide 219339 220397 . + . ID=LTnewLM_080010500.1:pep;Derives_from=LTnewLM_080010500.1;orthologous_to=LmjF.08.0540_mRNA;ortholog_cluster=OG0007245;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 222901 224367 1 + . ID=LTnewLM_080010600 LTnewLM_8 AUGUSTUS mRNA 222901 224367 1 + . ID=LTnewLM_080010600.1;Parent=LTnewLM_080010600 LTnewLM_8 AUGUSTUS CDS 222901 224367 1 + 0 ID=LTnewLM_080010600.1:CDS:1;Parent=LTnewLM_080010600.1 ### LTnewLM_8 . polypeptide 222901 224367 . + . ID=LTnewLM_080010600.1:pep;Derives_from=LTnewLM_080010600.1;product=term%3DMycolic acid cyclopropane synthetase/Methyltransferase small domain/Methyltransferase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02353|Pfam:PF05175|Pfam:PF13489|Pfam:PF13649|Pfam:PF08241|Pfam:PF08242;Ontology_term=GO:0008168,GO:0008152,GO:0008610 LTnewLM_8 Pfam protein_match 223474 224313 . + . Parent=LTnewLM_080010600.1:pep;Name=PF02353;signature_desc=Mycolic acid cyclopropane synthetase;Ontology_term=GO:0008610 LTnewLM_8 Pfam protein_match 223627 223896 . + . Parent=LTnewLM_080010600.1:pep;Name=PF05175;signature_desc=Methyltransferase small domain;Ontology_term=GO:0008168 LTnewLM_8 Pfam protein_match 223675 224046 . + . Parent=LTnewLM_080010600.1:pep;Name=PF13489;signature_desc=Methyltransferase domain LTnewLM_8 Pfam protein_match 223696 223968 . + . Parent=LTnewLM_080010600.1:pep;Name=PF13649;signature_desc=Methyltransferase domain LTnewLM_8 Pfam protein_match 223699 223968 . + . Parent=LTnewLM_080010600.1:pep;Name=PF08241;signature_desc=Methyltransferase domain;Ontology_term=GO:0008168,GO:0008152 LTnewLM_8 Pfam protein_match 223699 223968 . + . Parent=LTnewLM_080010600.1:pep;Name=PF08242;signature_desc=Methyltransferase domain ### LTnewLM_8 AUGUSTUS gene 226206 227243 1 + . ID=LTnewLM_080010700 LTnewLM_8 AUGUSTUS mRNA 226206 227243 1 + . ID=LTnewLM_080010700.1;Parent=LTnewLM_080010700 LTnewLM_8 AUGUSTUS CDS 226206 227243 1 + 0 ID=LTnewLM_080010700.1:CDS:1;Parent=LTnewLM_080010700.1 ### LTnewLM_8 . polypeptide 226206 227243 . + . ID=LTnewLM_080010700.1:pep;Derives_from=LTnewLM_080010700.1;orthologous_to=LmjF.08.0550_mRNA;ortholog_cluster=OG0007246;product=term%3DDomain found in IF2B/IF5%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01873;Ontology_term=GO:0006413,GO:0003743 LTnewLM_8 Pfam protein_match 226821 227153 . + . Parent=LTnewLM_080010700.1:pep;Name=PF01873;signature_desc=Domain found in IF2B/IF5;Ontology_term=GO:0003743,GO:0006413 ### LTnewLM_8 AUGUSTUS gene 229104 229934 1 + . ID=LTnewLM_080010800 LTnewLM_8 AUGUSTUS mRNA 229104 229934 1 + . ID=LTnewLM_080010800.1;Parent=LTnewLM_080010800 LTnewLM_8 AUGUSTUS CDS 229104 229934 1 + 0 ID=LTnewLM_080010800.1:CDS:1;Parent=LTnewLM_080010800.1 ### LTnewLM_8 . polypeptide 229104 229934 . + . ID=LTnewLM_080010800.1:pep;Derives_from=LTnewLM_080010800.1;orthologous_to=LmjF.08.0560_mRNA;ortholog_cluster=OG0007247;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 231083 231718 1 + . ID=LTnewLM_080010900 LTnewLM_8 AUGUSTUS mRNA 231083 231718 1 + . ID=LTnewLM_080010900.1;Parent=LTnewLM_080010900 LTnewLM_8 AUGUSTUS CDS 231083 231718 1 + 0 ID=LTnewLM_080010900.1:CDS:1;Parent=LTnewLM_080010900.1 ### LTnewLM_8 . polypeptide 231083 231718 . + . ID=LTnewLM_080010900.1:pep;Derives_from=LTnewLM_080010900.1;orthologous_to=LmjF.08.0570_mRNA;ortholog_cluster=OG0007248;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 234303 235016 1 + . ID=LTnewLM_080011000 LTnewLM_8 AUGUSTUS mRNA 234303 235016 1 + . ID=LTnewLM_080011000.1;Parent=LTnewLM_080011000 LTnewLM_8 AUGUSTUS CDS 234303 235016 1 + 0 ID=LTnewLM_080011000.1:CDS:1;Parent=LTnewLM_080011000.1 ### LTnewLM_8 . polypeptide 234303 235016 . + . ID=LTnewLM_080011000.1:pep;Derives_from=LTnewLM_080011000.1;orthologous_to=LmjF.08.0580_mRNA;ortholog_cluster=OG0007249;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . pseudogene 236862 238833 2.52e+03 + . ID=LTnewLM_080011100:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;Target=LmjF.08.0590.1:mRNA 1 623;original_prot_length=624 LTnewLM_8 . pseudogenic_transcript 236862 238833 . + . ID=LTnewLM_080011100.1;Parent=LTnewLM_080011100:pseudogene LTnewLM_8 . pseudogenic_exon 236862 236951 . + . ID=LTnewLM_080011100.1:pseudogenic_exon:1;Parent=LTnewLM_080011100.1 LTnewLM_8 . pseudogenic_exon 236953 237081 . + . ID=LTnewLM_080011100.1:pseudogenic_exon:2;Parent=LTnewLM_080011100.1 LTnewLM_8 . pseudogenic_exon 237084 237149 . + . ID=LTnewLM_080011100.1:pseudogenic_exon:3;Parent=LTnewLM_080011100.1 LTnewLM_8 . pseudogenic_exon 237158 237292 . + . ID=LTnewLM_080011100.1:pseudogenic_exon:4;Parent=LTnewLM_080011100.1 LTnewLM_8 . pseudogenic_exon 237295 238833 . + . ID=LTnewLM_080011100.1:pseudogenic_exon:5;Parent=LTnewLM_080011100.1 ### LTnewLM_8 . polypeptide 236862 238833 . + . ID=LTnewLM_080011100.1:pep;Derives_from=LTnewLM_080011100.1;orthologous_to=LmjF.08.0590.1_mRNA,LmjF.08.0590.2_mRNA;ortholog_cluster=OG0000551;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 245161 245592 1 + . ID=LTnewLM_080011200 LTnewLM_8 AUGUSTUS mRNA 245161 245592 1 + . ID=LTnewLM_080011200.1;Parent=LTnewLM_080011200 LTnewLM_8 AUGUSTUS CDS 245161 245592 1 + 0 ID=LTnewLM_080011200.1:CDS:1;Parent=LTnewLM_080011200.1 ### LTnewLM_8 . polypeptide 245161 245592 . + . ID=LTnewLM_080011200.1:pep;Derives_from=LTnewLM_080011200.1;orthologous_to=LmjF.08.0600_mRNA;ortholog_cluster=OG0007250;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 252562 261210 1 + . ID=LTnewLM_080011300 LTnewLM_8 AUGUSTUS mRNA 252562 261210 1 + . ID=LTnewLM_080011300.1;Parent=LTnewLM_080011300 LTnewLM_8 AUGUSTUS CDS 252562 261210 1 + 0 ID=LTnewLM_080011300.1:CDS:1;Parent=LTnewLM_080011300.1 ### LTnewLM_8 . polypeptide 252562 261210 . + . ID=LTnewLM_080011300.1:pep;Derives_from=LTnewLM_080011300.1;orthologous_to=LmjF.08.0620_mRNA;ortholog_cluster=OG0007251;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . polypeptide 264549 268153 . + . ID=LTnewLM_080011400.1:pep;Derives_from=LTnewLM_080011400.1;orthologous_to=LTnewLM_080011400.2,LmjF.08.0630_mRNA;ortholog_cluster=OG0000500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 264549 271199 1.58 + . ID=LTnewLM_080011400 LTnewLM_8 AUGUSTUS mRNA 264549 268153 0.58 + . ID=LTnewLM_080011400.1;Parent=LTnewLM_080011400 LTnewLM_8 AUGUSTUS CDS 264549 268044 1 + 0 ID=LTnewLM_080011400.1:CDS:1;Parent=LTnewLM_080011400.1 LTnewLM_8 AUGUSTUS CDS 268110 268153 0.58 + 2 ID=LTnewLM_080011400.1:CDS:2;Parent=LTnewLM_080011400.1 LTnewLM_8 AUGUSTUS mRNA 264549 271199 1 + . ID=LTnewLM_080011400.2;Parent=LTnewLM_080011400 LTnewLM_8 AUGUSTUS CDS 264549 271199 1 + 0 ID=LTnewLM_080011400.2:CDS:1;Parent=LTnewLM_080011400.2 ### LTnewLM_8 . polypeptide 264549 271199 . + . ID=LTnewLM_080011400.2:pep;Derives_from=LTnewLM_080011400.2;orthologous_to=LTnewLM_080011400.1,LmjF.08.0630_mRNA;ortholog_cluster=OG0000500;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 272961 273863 1 + . ID=LTnewLM_080011500 LTnewLM_8 AUGUSTUS mRNA 272961 273863 1 + . ID=LTnewLM_080011500.1;Parent=LTnewLM_080011500 LTnewLM_8 AUGUSTUS CDS 272961 273863 1 + 0 ID=LTnewLM_080011500.1:CDS:1;Parent=LTnewLM_080011500.1 ### LTnewLM_8 . polypeptide 272961 273863 . + . ID=LTnewLM_080011500.1:pep;Derives_from=LTnewLM_080011500.1;orthologous_to=LmjF.08.0640_mRNA;ortholog_cluster=OG0007252;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 279571 280416 1 + . ID=LTnewLM_080011600 LTnewLM_8 AUGUSTUS mRNA 279571 280416 1 + . ID=LTnewLM_080011600.1;Parent=LTnewLM_080011600 LTnewLM_8 AUGUSTUS CDS 279571 280416 1 + 0 ID=LTnewLM_080011600.1:CDS:1;Parent=LTnewLM_080011600.1 ### LTnewLM_8 . polypeptide 279571 280416 . + . ID=LTnewLM_080011600.1:pep;Derives_from=LTnewLM_080011600.1;orthologous_to=LmjF.08.0650_mRNA;ortholog_cluster=OG0007253;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_8 Pfam protein_match 279577 279792 . + . Parent=LTnewLM_080011600.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_8 AUGUSTUS gene 282505 286584 1 + . ID=LTnewLM_080011700 LTnewLM_8 AUGUSTUS mRNA 282505 286584 1 + . ID=LTnewLM_080011700.1;Parent=LTnewLM_080011700 LTnewLM_8 AUGUSTUS CDS 282505 286584 1 + 0 ID=LTnewLM_080011700.1:CDS:1;Parent=LTnewLM_080011700.1 ### LTnewLM_8 . polypeptide 282505 286584 . + . ID=LTnewLM_080011700.1:pep;Derives_from=LTnewLM_080011700.1;orthologous_to=LmjF.08.0660_mRNA;ortholog_cluster=OG0007254;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_8 Pfam protein_match 285814 286524 . + . Parent=LTnewLM_080011700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 285832 286278 . + . Parent=LTnewLM_080011700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_8 AUGUSTUS gene 292386 293000 1 + . ID=LTnewLM_080011800 LTnewLM_8 AUGUSTUS mRNA 292386 293000 1 + . ID=LTnewLM_080011800.1;Parent=LTnewLM_080011800 LTnewLM_8 AUGUSTUS CDS 292386 293000 1 + 0 ID=LTnewLM_080011800.1:CDS:1;Parent=LTnewLM_080011800.1 ### LTnewLM_8 . polypeptide 292386 293000 . + . ID=LTnewLM_080011800.1:pep;Derives_from=LTnewLM_080011800.1;orthologous_to=LmjF.08.0670_mRNA,LmjF.08.0680_mRNA,LmjF.08.0690_mRNA,LmjF.08.0710_mRNA,LmjF.08.0730_mRNA,LmjF.08.0750_mRNA;ortholog_cluster=OG0000045;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_8 Pfam protein_match 292428 292892 . + . Parent=LTnewLM_080011800.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_8 AUGUSTUS gene 297111 298618 0.89 + . ID=LTnewLM_080011900 LTnewLM_8 AUGUSTUS mRNA 297111 298618 0.89 + . ID=LTnewLM_080011900.1;Parent=LTnewLM_080011900 LTnewLM_8 AUGUSTUS CDS 297111 298020 0.91 + 0 ID=LTnewLM_080011900.1:CDS:1;Parent=LTnewLM_080011900.1 LTnewLM_8 AUGUSTUS CDS 298590 298618 0.89 + 2 ID=LTnewLM_080011900.1:CDS:2;Parent=LTnewLM_080011900.1 ### LTnewLM_8 . polypeptide 297111 298618 . + . ID=LTnewLM_080011900.1:pep;Derives_from=LTnewLM_080011900.1;orthologous_to=LTnewLM_100011300.1,LTnewLM_100011400.1,LTnewLM_110007900.1,LTnewLM_160014500.1,LTnewLM_170022000.1,LTnewLM_250017400.1,LTnewLM_290020100.1,LTnewLM_320039200.1,LTnewLM_340008500.1,LTnewLM_340018600.1,LTnewLM_350056000.1,LTnewLM_350058800.1,LTnewLM_360031700.1,LmjF.16.0880_mRNA;ortholog_cluster=OG0000009;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 299486 301300 1 + . ID=LTnewLM_080012000 LTnewLM_8 AUGUSTUS mRNA 299486 301300 1 + . ID=LTnewLM_080012000.1;Parent=LTnewLM_080012000 LTnewLM_8 AUGUSTUS CDS 299486 301300 1 + 0 ID=LTnewLM_080012000.1:CDS:1;Parent=LTnewLM_080012000.1 ### LTnewLM_8 . polypeptide 299486 301300 . + . ID=LTnewLM_080012000.1:pep;Derives_from=LTnewLM_080012000.1;orthologous_to=LmjF.08.0780_mRNA;ortholog_cluster=OG0007255;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . pseudogene 302403 304527 . + . ID=LTnewLM_080012100:pseudogene;coverage=0.994;sequence_ID=0.945;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.0790_0;has_internal_stop=true LTnewLM_8 . pseudogenic_transcript 302403 304527 . + . ID=LTnewLM_080012100.1;Parent=LTnewLM_080012100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_8 . pseudogenic_exon 302403 304527 . + . ID=LTnewLM_080012100.1:pseudogenic_exon:1;Parent=LTnewLM_080012100.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 302403 304527 . + . ID=LTnewLM_080012100.1:pep;Derives_from=LTnewLM_080012100.1;orthologous_to=LTnewLM_290036300.1,LTnewLM_310010200.1,LTnewLM_310010600.1,LTnewLM_340010700.1,LTnewLM_340033900.1;ortholog_cluster=OG0000063;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 305686 306135 1 + . ID=LTnewLM_080012200 LTnewLM_8 AUGUSTUS mRNA 305686 306135 1 + . ID=LTnewLM_080012200.1;Parent=LTnewLM_080012200 LTnewLM_8 AUGUSTUS CDS 305686 306135 1 + 0 ID=LTnewLM_080012200.1:CDS:1;Parent=LTnewLM_080012200.1 ### LTnewLM_8 . polypeptide 305686 306135 . + . ID=LTnewLM_080012200.1:pep;Derives_from=LTnewLM_080012200.1;orthologous_to=LTnewLM_080012300.1,LTnewLM_290020200.1,LTnewLM_340034000.1,LmjF.08.0790_mRNA,LmjF.34.2800_mRNA;ortholog_cluster=OG0000062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 306328 306717 1 + . ID=LTnewLM_080012300 LTnewLM_8 AUGUSTUS mRNA 306328 306717 1 + . ID=LTnewLM_080012300.1;Parent=LTnewLM_080012300 LTnewLM_8 AUGUSTUS CDS 306328 306717 1 + 0 ID=LTnewLM_080012300.1:CDS:1;Parent=LTnewLM_080012300.1 ### LTnewLM_8 . polypeptide 306328 306717 . + . ID=LTnewLM_080012300.1:pep;Derives_from=LTnewLM_080012300.1;orthologous_to=LTnewLM_080012200.1,LTnewLM_290020200.1,LTnewLM_340034000.1,LmjF.08.0790_mRNA,LmjF.34.2800_mRNA;ortholog_cluster=OG0000062;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 307814 310963 0.8 + . ID=LTnewLM_080012400 LTnewLM_8 AUGUSTUS mRNA 307814 310963 0.8 + . ID=LTnewLM_080012400.1;Parent=LTnewLM_080012400 LTnewLM_8 AUGUSTUS CDS 307814 308345 0.83 + 0 ID=LTnewLM_080012400.1:CDS:1;Parent=LTnewLM_080012400.1 LTnewLM_8 AUGUSTUS CDS 310527 310963 0.94 + 2 ID=LTnewLM_080012400.1:CDS:2;Parent=LTnewLM_080012400.1 ### LTnewLM_8 . polypeptide 307814 310963 . + . ID=LTnewLM_080012400.1:pep;Derives_from=LTnewLM_080012400.1;orthologous_to=LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_8 Pfam protein_match 307856 308314 . + . Parent=LTnewLM_080012400.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_8 AUGUSTUS gene 312974 313558 0.73 + . ID=LTnewLM_080012500 LTnewLM_8 AUGUSTUS mRNA 312974 313558 0.73 + . ID=LTnewLM_080012500.1;Parent=LTnewLM_080012500 LTnewLM_8 AUGUSTUS CDS 312974 313098 1 + 0 ID=LTnewLM_080012500.1:CDS:1;Parent=LTnewLM_080012500.1 LTnewLM_8 AUGUSTUS CDS 313168 313558 0.73 + 1 ID=LTnewLM_080012500.1:CDS:2;Parent=LTnewLM_080012500.1 ### LTnewLM_8 . polypeptide 312974 313558 . + . ID=LTnewLM_080012500.1:pep;Derives_from=LTnewLM_080012500.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012600.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_8 Pfam protein_match 313187 313417 . + . Parent=LTnewLM_080012500.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_8 . pseudogene 318072 318625 697 + . ID=LTnewLM_080012600:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;Target=LmjF.08.0810:mRNA 1 184;original_prot_length=188 LTnewLM_8 . pseudogenic_transcript 318072 318625 . + . ID=LTnewLM_080012600.1;Parent=LTnewLM_080012600:pseudogene LTnewLM_8 . pseudogenic_exon 318072 318515 . + . ID=LTnewLM_080012600.1:pseudogenic_exon:1;Parent=LTnewLM_080012600.1 LTnewLM_8 . pseudogenic_exon 318518 318625 . + . ID=LTnewLM_080012600.1:pseudogenic_exon:2;Parent=LTnewLM_080012600.1 ### LTnewLM_8 . polypeptide 318072 318625 . + . ID=LTnewLM_080012600.1:pep;Derives_from=LTnewLM_080012600.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012700.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3DAmastin surface glycoprotein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07344 LTnewLM_8 Pfam protein_match 318114 318581 . + . Parent=LTnewLM_080012600.1:pep;Name=PF07344;signature_desc=Amastin surface glycoprotein ### LTnewLM_8 AUGUSTUS gene 320977 321288 0.77 + . ID=LTnewLM_080012700 LTnewLM_8 AUGUSTUS mRNA 320977 321288 0.77 + . ID=LTnewLM_080012700.1;Parent=LTnewLM_080012700 LTnewLM_8 AUGUSTUS CDS 320977 321288 0.77 + 0 ID=LTnewLM_080012700.1:CDS:1;Parent=LTnewLM_080012700.1 ### LTnewLM_8 . polypeptide 320977 321288 . + . ID=LTnewLM_080012700.1:pep;Derives_from=LTnewLM_080012700.1;orthologous_to=LTnewLM_080012400.1,LTnewLM_080012500.1,LTnewLM_080012600.1,LTnewLM_290020300.1,LTnewLM_340010800.1,LTnewLM_340016100.1,LTnewLM_340016200.1,LTnewLM_340018000.1,LTnewLM_340034100.1,LTnewLM_340034200.1,LmjF.08.0820_mRNA;ortholog_cluster=OG0000014;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . gene 323478 324350 . + . ID=LTnewLM_080012800;has_internal_stop=false;has_frameshift=false;has_start=true;has_stop=true;Target=LmjF.08.0860:mRNA 1 291;original_prot_length=291 LTnewLM_8 . mRNA 323478 324350 . + . ID=LTnewLM_080012800.1;Parent=LTnewLM_080012800 LTnewLM_8 . CDS 323478 324350 . + 0 ID=LTnewLM_080012800.1:CDS:1;Parent=LTnewLM_080012800.1 ### LTnewLM_8 . polypeptide 323478 324350 . + . ID=LTnewLM_080012800.1:pep;Derives_from=LTnewLM_080012800.1;orthologous_to=LmjF.08.0860_mRNA;ortholog_cluster=OG0007256;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 327931 329190 1 - . ID=LTnewLM_080012900 LTnewLM_8 AUGUSTUS mRNA 327931 329190 1 - . ID=LTnewLM_080012900.1;Parent=LTnewLM_080012900 LTnewLM_8 AUGUSTUS CDS 327931 329190 1 - 0 ID=LTnewLM_080012900.1:CDS:1;Parent=LTnewLM_080012900.1 ### LTnewLM_8 . polypeptide 327931 329190 . - . ID=LTnewLM_080012900.1:pep;Derives_from=LTnewLM_080012900.1;orthologous_to=LmjF.08.0870_mRNA;ortholog_cluster=OG0007257;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 Liftoff gene 330866 332416 . - . ID=LTnewLM_080013000;coverage=1.0;sequence_ID=0.950;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.0880_0 LTnewLM_8 Liftoff mRNA 330866 332416 . - . ID=LTnewLM_080013000.1;Parent=LTnewLM_080013000;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 330866 332416 . - 0 ID=LTnewLM_080013000.1:CDS:1;Parent=LTnewLM_080013000.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 330866 332416 . - . ID=LTnewLM_080013000.1:pep;Derives_from=LTnewLM_080013000.1;orthologous_to=LmjF.08.0880_mRNA;ortholog_cluster=OG0007258;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 330986 331360 . - . Parent=LTnewLM_080013000.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_8 AUGUSTUS gene 333811 334941 1 - . ID=LTnewLM_080013100 LTnewLM_8 AUGUSTUS mRNA 333811 334941 1 - . ID=LTnewLM_080013100.1;Parent=LTnewLM_080013100 LTnewLM_8 AUGUSTUS CDS 333811 334941 1 - 0 ID=LTnewLM_080013100.1:CDS:1;Parent=LTnewLM_080013100.1 ### LTnewLM_8 . polypeptide 333811 334941 . - . ID=LTnewLM_080013100.1:pep;Derives_from=LTnewLM_080013100.1;orthologous_to=LmjF.08.0890_mRNA;ortholog_cluster=OG0007259;product=term%3DHelix-hairpin-helix domain/Fingers domain of DNA polymerase lambda/DNA polymerase beta palm/DNA polymerase beta thumb%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14716|Pfam:PF10391|Pfam:PF14792|Pfam:PF14791;Ontology_term=GO:0034061,GO:0005634,GO:0003677 LTnewLM_8 Pfam protein_match 333820 334095 . - . Parent=LTnewLM_080013100.1:pep;Name=PF14791;signature_desc=DNA polymerase beta thumb LTnewLM_8 Pfam protein_match 334117 334488 . - . Parent=LTnewLM_080013100.1:pep;Name=PF14792;signature_desc=DNA polymerase beta palm LTnewLM_8 Pfam protein_match 334495 334653 . - . Parent=LTnewLM_080013100.1:pep;Name=PF10391;signature_desc=Fingers domain of DNA polymerase lambda;Ontology_term=GO:0003677,GO:0034061,GO:0005634 LTnewLM_8 Pfam protein_match 334714 334905 . - . Parent=LTnewLM_080013100.1:pep;Name=PF14716;signature_desc=Helix-hairpin-helix domain ### LTnewLM_8 AUGUSTUS gene 336445 340871 0.89 - . ID=LTnewLM_080013200 LTnewLM_8 AUGUSTUS mRNA 336445 340871 0.89 - . ID=LTnewLM_080013200.1;Parent=LTnewLM_080013200 LTnewLM_8 AUGUSTUS CDS 336445 336489 0.89 - 0 ID=LTnewLM_080013200.1:CDS:1;Parent=LTnewLM_080013200.1 LTnewLM_8 AUGUSTUS CDS 336540 340871 0.89 - 0 ID=LTnewLM_080013200.1:CDS:2;Parent=LTnewLM_080013200.1 ### LTnewLM_8 . polypeptide 336445 340871 . - . ID=LTnewLM_080013200.1:pep;Derives_from=LTnewLM_080013200.1;orthologous_to=LmjF.08.0900_mRNA;ortholog_cluster=OG0007260;product=term%3DFingers domain of DNA polymerase lambda/DNA polymerase beta palm/DNA polymerase beta thumb%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10391|Pfam:PF14792|Pfam:PF14791;Ontology_term=GO:0034061,GO:0005634,GO:0003677 LTnewLM_8 Pfam protein_match 336507 336953 . - . Parent=LTnewLM_080013200.1:pep;Name=PF14791;signature_desc=DNA polymerase beta thumb LTnewLM_8 Pfam protein_match 336975 337385 . - . Parent=LTnewLM_080013200.1:pep;Name=PF14792;signature_desc=DNA polymerase beta palm LTnewLM_8 Pfam protein_match 337395 337619 . - . Parent=LTnewLM_080013200.1:pep;Name=PF10391;signature_desc=Fingers domain of DNA polymerase lambda;Ontology_term=GO:0003677,GO:0034061,GO:0005634 ### LTnewLM_8 AUGUSTUS gene 342945 349283 1 - . ID=LTnewLM_080013300 LTnewLM_8 AUGUSTUS mRNA 342945 349283 1 - . ID=LTnewLM_080013300.1;Parent=LTnewLM_080013300 LTnewLM_8 AUGUSTUS CDS 342945 349283 1 - 0 ID=LTnewLM_080013300.1:CDS:1;Parent=LTnewLM_080013300.1 ### LTnewLM_8 . polypeptide 342945 349283 . - . ID=LTnewLM_080013300.1:pep;Derives_from=LTnewLM_080013300.1;orthologous_to=LmjF.08.0910_mRNA;ortholog_cluster=OG0007261;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . polypeptide 350441 351055 . - . ID=LTnewLM_080013400.1:pep;Derives_from=LTnewLM_080013400.1;orthologous_to=LTnewLM_080013400.2,LmjF.08.0920.1_mRNA,LmjF.08.0920.2_mRNA;ortholog_cluster=OG0000275;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . polypeptide 350441 351175 . - . ID=LTnewLM_080013400.2:pep;Derives_from=LTnewLM_080013400.2;orthologous_to=LTnewLM_080013400.1,LmjF.08.0920.1_mRNA,LmjF.08.0920.2_mRNA;ortholog_cluster=OG0000275;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 Liftoff gene 350441 353044 . - . ID=LTnewLM_080013400;coverage=0.993;sequence_ID=0.907;valid_ORFs=2;extra_copy_number=0;copy_num_ID=LmjF.08.0920_0 LTnewLM_8 Liftoff mRNA 350441 351063 . - . ID=LTnewLM_080013400.1;Parent=LTnewLM_080013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 350441 351055 . - 0 ID=LTnewLM_080013400.1:CDS:1;Parent=LTnewLM_080013400.1;extra_copy_number=0 LTnewLM_8 Liftoff five_prime_UTR 351056 351063 . - . ID=LTnewLM_080013400:five_prime_UTR;Parent=LTnewLM_080013400.1;extra_copy_number=0 LTnewLM_8 Liftoff mRNA 350441 353044 . - . ID=LTnewLM_080013400.2;Parent=LTnewLM_080013400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 350441 351175 . - 0 ID=LTnewLM_080013400.2:CDS:1;Parent=LTnewLM_080013400.2;extra_copy_number=0 LTnewLM_8 Liftoff five_prime_UTR 351176 353044 . - . ID=LTnewLM_080013400:five_prime_UTR.1;Parent=LTnewLM_080013400.2;extra_copy_number=0 ### LTnewLM_8 AUGUSTUS gene 355374 358826 1 - . ID=LTnewLM_080013500 LTnewLM_8 AUGUSTUS mRNA 355374 358826 1 - . ID=LTnewLM_080013500.1;Parent=LTnewLM_080013500 LTnewLM_8 AUGUSTUS CDS 355374 358826 1 - 0 ID=LTnewLM_080013500.1:CDS:1;Parent=LTnewLM_080013500.1 ### LTnewLM_8 . polypeptide 355374 358826 . - . ID=LTnewLM_080013500.1:pep;Derives_from=LTnewLM_080013500.1;orthologous_to=LmjF.08.0930_mRNA;ortholog_cluster=OG0007262;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_8 Pfam protein_match 357891 358739 . - . Parent=LTnewLM_080013500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 357906 358730 . - . Parent=LTnewLM_080013500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_8 AUGUSTUS gene 359752 360642 1 - . ID=LTnewLM_080013600 LTnewLM_8 AUGUSTUS mRNA 359752 360642 1 - . ID=LTnewLM_080013600.1;Parent=LTnewLM_080013600 LTnewLM_8 AUGUSTUS CDS 359752 360642 1 - 0 ID=LTnewLM_080013600.1:CDS:1;Parent=LTnewLM_080013600.1 ### LTnewLM_8 . polypeptide 359752 360642 . - . ID=LTnewLM_080013600.1:pep;Derives_from=LTnewLM_080013600.1;orthologous_to=LmjF.08.0940_mRNA;ortholog_cluster=OG0007263;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 Liftoff gene 361355 361804 . - . ID=LTnewLM_080013700;coverage=1.0;sequence_ID=0.933;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.0950_0 LTnewLM_8 Liftoff mRNA 361355 361804 . - . ID=LTnewLM_080013700.1;Parent=LTnewLM_080013700;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 361355 361804 . - 0 ID=LTnewLM_080013700.1:CDS:1;Parent=LTnewLM_080013700.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 361355 361804 . - . ID=LTnewLM_080013700.1:pep;Derives_from=LTnewLM_080013700.1;orthologous_to=LmjF.08.0950_mRNA;ortholog_cluster=OG0007264;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 363216 364913 1 - . ID=LTnewLM_080013800 LTnewLM_8 AUGUSTUS mRNA 363216 364913 1 - . ID=LTnewLM_080013800.1;Parent=LTnewLM_080013800 LTnewLM_8 AUGUSTUS CDS 363216 364913 1 - 0 ID=LTnewLM_080013800.1:CDS:1;Parent=LTnewLM_080013800.1 ### LTnewLM_8 . polypeptide 363216 364913 . - . ID=LTnewLM_080013800.1:pep;Derives_from=LTnewLM_080013800.1;orthologous_to=LmjF.08.0960_mRNA;ortholog_cluster=OG0007265;product=term%3DDpy-30 motif containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05186 LTnewLM_8 Pfam protein_match 364797 364913 . - . Parent=LTnewLM_080013800.1:pep;Name=PF05186;signature_desc=Dpy-30 motif ### LTnewLM_8 AUGUSTUS gene 366789 369287 1 - . ID=LTnewLM_080013900 LTnewLM_8 AUGUSTUS mRNA 366789 369287 1 - . ID=LTnewLM_080013900.1;Parent=LTnewLM_080013900 LTnewLM_8 AUGUSTUS CDS 366789 369287 1 - 0 ID=LTnewLM_080013900.1:CDS:1;Parent=LTnewLM_080013900.1 ### LTnewLM_8 . polypeptide 366789 369287 . - . ID=LTnewLM_080013900.1:pep;Derives_from=LTnewLM_080013900.1;orthologous_to=LmjF.08.0970_mRNA;ortholog_cluster=OG0007266;product=term%3DTransmembrane protein 65%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF10507 LTnewLM_8 Pfam protein_match 366978 367283 . - . Parent=LTnewLM_080013900.1:pep;Name=PF10507;signature_desc=Transmembrane protein 65 ### LTnewLM_8 AUGUSTUS gene 374145 374585 1 - . ID=LTnewLM_080014000 LTnewLM_8 AUGUSTUS mRNA 374145 374585 1 - . ID=LTnewLM_080014000.1;Parent=LTnewLM_080014000 LTnewLM_8 AUGUSTUS CDS 374145 374585 1 - 0 ID=LTnewLM_080014000.1:CDS:1;Parent=LTnewLM_080014000.1 ### LTnewLM_8 . polypeptide 374145 374585 . - . ID=LTnewLM_080014000.1:pep;Derives_from=LTnewLM_080014000.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 374861 377974 1 - . ID=LTnewLM_080014100 LTnewLM_8 AUGUSTUS mRNA 374861 377974 1 - . ID=LTnewLM_080014100.1;Parent=LTnewLM_080014100 LTnewLM_8 AUGUSTUS CDS 374861 377974 1 - 0 ID=LTnewLM_080014100.1:CDS:1;Parent=LTnewLM_080014100.1 ### LTnewLM_8 . polypeptide 374861 377974 . - . ID=LTnewLM_080014100.1:pep;Derives_from=LTnewLM_080014100.1;orthologous_to=LmjF.08.0980_mRNA;ortholog_cluster=OG0007267;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 379140 380120 1 - . ID=LTnewLM_080014200 LTnewLM_8 AUGUSTUS mRNA 379140 380120 1 - . ID=LTnewLM_080014200.1;Parent=LTnewLM_080014200 LTnewLM_8 AUGUSTUS CDS 379140 380120 1 - 0 ID=LTnewLM_080014200.1:CDS:1;Parent=LTnewLM_080014200.1 ### LTnewLM_8 . polypeptide 379140 380120 . - . ID=LTnewLM_080014200.1:pep;Derives_from=LTnewLM_080014200.1;orthologous_to=LmjF.08.0990_mRNA;ortholog_cluster=OG0007268;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_8 Pfam protein_match 379461 379631 . - . Parent=LTnewLM_080014200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_8 Liftoff gene 380825 388531 . - . ID=LTnewLM_080014300;coverage=0.999;sequence_ID=0.949;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.08.1000_0 LTnewLM_8 Liftoff mRNA 380825 388531 . - . ID=LTnewLM_080014300.1;Parent=LTnewLM_080014300;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 380825 388531 . - 0 ID=LTnewLM_080014300.1:CDS:1;Parent=LTnewLM_080014300.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 380825 388531 . - . ID=LTnewLM_080014300.1:pep;Derives_from=LTnewLM_080014300.1;orthologous_to=LmjF.08.1000_mRNA;ortholog_cluster=OG0007269;product=term%3DAAA domain (dynein-related subfamily)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728;Ontology_term=GO:0016887,GO:0005524 LTnewLM_8 Pfam protein_match 384458 384895 . - . Parent=LTnewLM_080014300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_8 Pfam protein_match 385631 386101 . - . Parent=LTnewLM_080014300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_8 Pfam protein_match 387341 387889 . - . Parent=LTnewLM_080014300.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_8 AUGUSTUS gene 390706 390930 1 - . ID=LTnewLM_080014400 LTnewLM_8 AUGUSTUS mRNA 390706 390930 1 - . ID=LTnewLM_080014400.1;Parent=LTnewLM_080014400 LTnewLM_8 AUGUSTUS CDS 390706 390930 1 - 0 ID=LTnewLM_080014400.1:CDS:1;Parent=LTnewLM_080014400.1 ### LTnewLM_8 . polypeptide 390706 390930 . - . ID=LTnewLM_080014400.1:pep;Derives_from=LTnewLM_080014400.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014500.1,LTnewLM_080014600.1,LTnewLM_080014700.1,LTnewLM_080014900.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DProtein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12131;Ontology_term=GO:0004197 LTnewLM_8 Pfam protein_match 390790 390930 . - . Parent=LTnewLM_080014400.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 ### LTnewLM_8 AUGUSTUS gene 390961 392037 1 - . ID=LTnewLM_080014500 LTnewLM_8 AUGUSTUS mRNA 390961 392037 1 - . ID=LTnewLM_080014500.1;Parent=LTnewLM_080014500 LTnewLM_8 AUGUSTUS CDS 390961 392037 1 - 0 ID=LTnewLM_080014500.1:CDS:1;Parent=LTnewLM_080014500.1 ### LTnewLM_8 . polypeptide 390961 392037 . - . ID=LTnewLM_080014500.1:pep;Derives_from=LTnewLM_080014500.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014400.1,LTnewLM_080014600.1,LTnewLM_080014700.1,LTnewLM_080014900.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 391036 391662 . - . Parent=LTnewLM_080014500.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 391759 391926 . - . Parent=LTnewLM_080014500.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_8 AUGUSTUS gene 393443 394774 1 - . ID=LTnewLM_080014600 LTnewLM_8 AUGUSTUS mRNA 393443 394774 1 - . ID=LTnewLM_080014600.1;Parent=LTnewLM_080014600 LTnewLM_8 AUGUSTUS CDS 393443 394774 1 - 0 ID=LTnewLM_080014600.1:CDS:1;Parent=LTnewLM_080014600.1 ### LTnewLM_8 . polypeptide 393443 394774 . - . ID=LTnewLM_080014600.1:pep;Derives_from=LTnewLM_080014600.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014400.1,LTnewLM_080014500.1,LTnewLM_080014700.1,LTnewLM_080014900.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease/Protein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112|Pfam:PF12131;Ontology_term=GO:0008234,GO:0004197,GO:0006508 LTnewLM_8 Pfam protein_match 393527 393754 . - . Parent=LTnewLM_080014600.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 LTnewLM_8 Pfam protein_match 393767 394399 . - . Parent=LTnewLM_080014600.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 394496 394663 . - . Parent=LTnewLM_080014600.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_8 AUGUSTUS gene 396180 397512 0.96 - . ID=LTnewLM_080014700 LTnewLM_8 AUGUSTUS mRNA 396180 397512 0.96 - . ID=LTnewLM_080014700.1;Parent=LTnewLM_080014700 LTnewLM_8 AUGUSTUS CDS 396180 396878 0.96 - 0 ID=LTnewLM_080014700.1:CDS:1;Parent=LTnewLM_080014700.1 LTnewLM_8 AUGUSTUS CDS 396925 397512 0.97 - 0 ID=LTnewLM_080014700.1:CDS:2;Parent=LTnewLM_080014700.1 ### LTnewLM_8 . polypeptide 396180 397512 . - . ID=LTnewLM_080014700.1:pep;Derives_from=LTnewLM_080014700.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014400.1,LTnewLM_080014500.1,LTnewLM_080014600.1,LTnewLM_080014900.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease/Protein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112|Pfam:PF12131;Ontology_term=GO:0008234,GO:0004197,GO:0006508 LTnewLM_8 Pfam protein_match 396310 396537 . - . Parent=LTnewLM_080014700.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 LTnewLM_8 Pfam protein_match 396550 397137 . - . Parent=LTnewLM_080014700.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 397234 397401 . - . Parent=LTnewLM_080014700.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_8 . pseudogene 399067 400608 . - . ID=LTnewLM_080014800:pseudogene;coverage=0.904;sequence_ID=0.840;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.1080_0;has_internal_stop=true LTnewLM_8 . pseudogenic_transcript 399067 400608 . - . ID=LTnewLM_080014800.1;Parent=LTnewLM_080014800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_8 . pseudogenic_exon 399067 400608 . - . ID=LTnewLM_080014800.1:pseudogenic_exon:1;Parent=LTnewLM_080014800.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 399067 400608 . - . ID=LTnewLM_080014800.1:pep;Derives_from=LTnewLM_080014800.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 401652 402983 1 - . ID=LTnewLM_080014900 LTnewLM_8 AUGUSTUS mRNA 401652 402983 1 - . ID=LTnewLM_080014900.1;Parent=LTnewLM_080014900 LTnewLM_8 AUGUSTUS CDS 401652 402983 1 - 0 ID=LTnewLM_080014900.1:CDS:1;Parent=LTnewLM_080014900.1 ### LTnewLM_8 . polypeptide 401652 402983 . - . ID=LTnewLM_080014900.1:pep;Derives_from=LTnewLM_080014900.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014400.1,LTnewLM_080014500.1,LTnewLM_080014600.1,LTnewLM_080014700.1,LTnewLM_080015000.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease/Protein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112|Pfam:PF12131;Ontology_term=GO:0008234,GO:0004197,GO:0006508 LTnewLM_8 Pfam protein_match 401736 401963 . - . Parent=LTnewLM_080014900.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 LTnewLM_8 Pfam protein_match 401976 402608 . - . Parent=LTnewLM_080014900.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 402705 402872 . - . Parent=LTnewLM_080014900.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_8 AUGUSTUS gene 404368 405717 1 - . ID=LTnewLM_080015000 LTnewLM_8 AUGUSTUS mRNA 404368 405717 1 - . ID=LTnewLM_080015000.1;Parent=LTnewLM_080015000 LTnewLM_8 AUGUSTUS CDS 404368 405717 1 - 0 ID=LTnewLM_080015000.1:CDS:1;Parent=LTnewLM_080015000.1 ### LTnewLM_8 . polypeptide 404368 405717 . - . ID=LTnewLM_080015000.1:pep;Derives_from=LTnewLM_080015000.1;orthologous_to=LTnewLM_000006100.1,LTnewLM_080014400.1,LTnewLM_080014500.1,LTnewLM_080014600.1,LTnewLM_080014700.1,LTnewLM_080014900.1;ortholog_cluster=OG0000046;product=term%3DCathepsin propeptide inhibitor domain (I29)/Papain family cysteine protease/Protein of unknown function (DUF3586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08246|Pfam:PF00112|Pfam:PF12131;Ontology_term=GO:0008234,GO:0004197,GO:0006508 LTnewLM_8 Pfam protein_match 404470 404697 . - . Parent=LTnewLM_080015000.1:pep;Name=PF12131;signature_desc=Protein of unknown function (DUF3586);Ontology_term=GO:0004197 LTnewLM_8 Pfam protein_match 404710 405342 . - . Parent=LTnewLM_080015000.1:pep;Name=PF00112;signature_desc=Papain family cysteine protease;Ontology_term=GO:0008234,GO:0006508 LTnewLM_8 Pfam protein_match 405439 405606 . - . Parent=LTnewLM_080015000.1:pep;Name=PF08246;signature_desc=Cathepsin propeptide inhibitor domain (I29) ### LTnewLM_8 AUGUSTUS gene 406573 408402 1 - . ID=LTnewLM_080015100 LTnewLM_8 AUGUSTUS mRNA 406573 408402 1 - . ID=LTnewLM_080015100.1;Parent=LTnewLM_080015100 LTnewLM_8 AUGUSTUS CDS 406573 408402 1 - 0 ID=LTnewLM_080015100.1:CDS:1;Parent=LTnewLM_080015100.1 ### LTnewLM_8 . polypeptide 406573 408402 . - . ID=LTnewLM_080015100.1:pep;Derives_from=LTnewLM_080015100.1;orthologous_to=LmjF.08.1090_mRNA;ortholog_cluster=OG0007270;product=term%3DHistone deacetylase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00850 LTnewLM_8 Pfam protein_match 406891 407979 . - . Parent=LTnewLM_080015100.1:pep;Name=PF00850;signature_desc=Histone deacetylase domain ### LTnewLM_8 Liftoff gene 420058 421164 . + . ID=LTnewLM_080015200;coverage=1.0;sequence_ID=0.955;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.08.1101_0 LTnewLM_8 Liftoff mRNA 420058 421164 . + . ID=LTnewLM_080015200.1;Parent=LTnewLM_080015200;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_8 Liftoff CDS 420058 421164 . + 0 ID=LTnewLM_080015200.1:CDS:1;Parent=LTnewLM_080015200.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 420058 421164 . + . ID=LTnewLM_080015200.1:pep;Derives_from=LTnewLM_080015200.1;orthologous_to=LmjF.08.1101.1;ortholog_cluster=OG0007271;product=term%3DRing finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DGeneDB:LmjF.08.1101.1;Ontology_term=GO:0008270,GO:0005515 LTnewLM_8 Pfam protein_match 420871 420996 . + . Parent=LTnewLM_080015200.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 ### LTnewLM_8 AUGUSTUS gene 422688 423785 1 + . ID=LTnewLM_080015300 LTnewLM_8 AUGUSTUS mRNA 422688 423785 1 + . ID=LTnewLM_080015300.1;Parent=LTnewLM_080015300 LTnewLM_8 AUGUSTUS CDS 422688 423785 1 + 0 ID=LTnewLM_080015300.1:CDS:1;Parent=LTnewLM_080015300.1 ### LTnewLM_8 . polypeptide 422688 423785 . + . ID=LTnewLM_080015300.1:pep;Derives_from=LTnewLM_080015300.1;orthologous_to=LmjF.08.1100_mRNA;ortholog_cluster=OG0007272;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 424793 426433 1 + . ID=LTnewLM_080015400 LTnewLM_8 AUGUSTUS mRNA 424793 426433 1 + . ID=LTnewLM_080015400.1;Parent=LTnewLM_080015400 LTnewLM_8 AUGUSTUS CDS 424793 426433 1 + 0 ID=LTnewLM_080015400.1:CDS:1;Parent=LTnewLM_080015400.1 ### LTnewLM_8 . polypeptide 424793 426433 . + . ID=LTnewLM_080015400.1:pep;Derives_from=LTnewLM_080015400.1;orthologous_to=LmjF.08.1110_mRNA;ortholog_cluster=OG0007273;product=term%3DTetratricopeptide repeat/STI1 domain/TPR repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00515|Pfam:PF07719|Pfam:PF13181|Pfam:PF17830|Pfam:PF13424|Pfam:PF13432|Pfam:PF13414|Pfam:PF13374;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 425003 425101 . + . Parent=LTnewLM_080015400.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 425003 425101 . + . Parent=LTnewLM_080015400.1:pep;Name=PF07719;signature_desc=Tetratricopeptide repeat LTnewLM_8 Pfam protein_match 425003 425101 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 425186 425338 . + . Parent=LTnewLM_080015400.1:pep;Name=PF17830;signature_desc=STI1 domain LTnewLM_8 Pfam protein_match 425570 425764 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13424;signature_desc=Tetratricopeptide repeat LTnewLM_8 Pfam protein_match 425879 426034 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13432;signature_desc=Tetratricopeptide repeat LTnewLM_8 Pfam protein_match 425885 426007 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13414;signature_desc=TPR repeat LTnewLM_8 Pfam protein_match 425969 426052 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13374;signature_desc=Tetratricopeptide repeat LTnewLM_8 Pfam protein_match 425972 426061 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 425972 426064 . + . Parent=LTnewLM_080015400.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 426071 426166 . + . Parent=LTnewLM_080015400.1:pep;Name=PF00515;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 426071 426166 . + . Parent=LTnewLM_080015400.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_8 Pfam protein_match 426248 426400 . + . Parent=LTnewLM_080015400.1:pep;Name=PF17830;signature_desc=STI1 domain ### LTnewLM_8 AUGUSTUS gene 428117 430726 1 + . ID=LTnewLM_080015500 LTnewLM_8 AUGUSTUS mRNA 428117 430726 1 + . ID=LTnewLM_080015500.1;Parent=LTnewLM_080015500 LTnewLM_8 AUGUSTUS CDS 428117 430726 1 + 0 ID=LTnewLM_080015500.1:CDS:1;Parent=LTnewLM_080015500.1 ### LTnewLM_8 . polypeptide 428117 430726 . + . ID=LTnewLM_080015500.1:pep;Derives_from=LTnewLM_080015500.1;orthologous_to=LmjF.08.1120_mRNA;ortholog_cluster=OG0007274;product=term%3DDM10 domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06565 LTnewLM_8 Pfam protein_match 428447 428770 . + . Parent=LTnewLM_080015500.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_8 Pfam protein_match 428939 429301 . + . Parent=LTnewLM_080015500.1:pep;Name=PF06565;signature_desc=DM10 domain LTnewLM_8 Pfam protein_match 429551 429868 . + . Parent=LTnewLM_080015500.1:pep;Name=PF06565;signature_desc=DM10 domain ### LTnewLM_8 . pseudogene 432454 433654 . + . ID=LTnewLM_080015600:pseudogene;coverage=0.998;sequence_ID=0.960;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.1130_0;has_internal_stop=true LTnewLM_8 . pseudogenic_transcript 432454 433654 . + . ID=LTnewLM_080015600.1;Parent=LTnewLM_080015600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_8 . pseudogenic_exon 432454 433654 . + . ID=LTnewLM_080015600.1:pseudogenic_exon:1;Parent=LTnewLM_080015600.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 432454 433654 . + . ID=LTnewLM_080015600.1:pep;Derives_from=LTnewLM_080015600.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 435196 438036 1 + . ID=LTnewLM_080015700 LTnewLM_8 AUGUSTUS mRNA 435196 438036 1 + . ID=LTnewLM_080015700.1;Parent=LTnewLM_080015700 LTnewLM_8 AUGUSTUS CDS 435196 438036 1 + 0 ID=LTnewLM_080015700.1:CDS:1;Parent=LTnewLM_080015700.1 ### LTnewLM_8 . polypeptide 435196 438036 . + . ID=LTnewLM_080015700.1:pep;Derives_from=LTnewLM_080015700.1;orthologous_to=LmjF.08.1140_mRNA;ortholog_cluster=OG0007275;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 438970 442404 1 + . ID=LTnewLM_080015800 LTnewLM_8 AUGUSTUS mRNA 438970 442404 1 + . ID=LTnewLM_080015800.1;Parent=LTnewLM_080015800 LTnewLM_8 AUGUSTUS CDS 438970 442404 1 + 0 ID=LTnewLM_080015800.1:CDS:1;Parent=LTnewLM_080015800.1 ### LTnewLM_8 . polypeptide 438970 442404 . + . ID=LTnewLM_080015800.1:pep;Derives_from=LTnewLM_080015800.1;orthologous_to=LmjF.08.1150_mRNA;ortholog_cluster=OG0007276;product=term%3DExocyst complex component Sec3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09763 LTnewLM_8 Pfam protein_match 439552 440880 . + . Parent=LTnewLM_080015800.1:pep;Name=PF09763;signature_desc=Exocyst complex component Sec3 LTnewLM_8 Pfam protein_match 441364 442329 . + . Parent=LTnewLM_080015800.1:pep;Name=PF09763;signature_desc=Exocyst complex component Sec3 ### LTnewLM_8 AUGUSTUS gene 443573 444853 1 + . ID=LTnewLM_080015900 LTnewLM_8 AUGUSTUS mRNA 443573 444853 1 + . ID=LTnewLM_080015900.1;Parent=LTnewLM_080015900 LTnewLM_8 AUGUSTUS CDS 443573 444853 1 + 0 ID=LTnewLM_080015900.1:CDS:1;Parent=LTnewLM_080015900.1 ### LTnewLM_8 . polypeptide 443573 444853 . + . ID=LTnewLM_080015900.1:pep;Derives_from=LTnewLM_080015900.1;orthologous_to=LmjF.08.1160_mRNA;ortholog_cluster=OG0007277;product=term%3DThiopurine S-methyltransferase (TPMT)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05724;Ontology_term=GO:0008757 LTnewLM_8 Pfam protein_match 444194 444730 . + . Parent=LTnewLM_080015900.1:pep;Name=PF05724;signature_desc=Thiopurine S-methyltransferase (TPMT);Ontology_term=GO:0008757 ### LTnewLM_8 AUGUSTUS gene 445906 447573 1 + . ID=LTnewLM_080016000 LTnewLM_8 AUGUSTUS mRNA 445906 447573 1 + . ID=LTnewLM_080016000.1;Parent=LTnewLM_080016000 LTnewLM_8 AUGUSTUS CDS 445906 447573 1 + 0 ID=LTnewLM_080016000.1:CDS:1;Parent=LTnewLM_080016000.1 ### LTnewLM_8 . polypeptide 445906 447573 . + . ID=LTnewLM_080016000.1:pep;Derives_from=LTnewLM_080016000.1;orthologous_to=LmjF.08.1170_mRNA;ortholog_cluster=OG0007278;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 448755 450008 1 + . ID=LTnewLM_080016100 LTnewLM_8 AUGUSTUS mRNA 448755 450008 1 + . ID=LTnewLM_080016100.1;Parent=LTnewLM_080016100 LTnewLM_8 AUGUSTUS CDS 448755 450008 1 + 0 ID=LTnewLM_080016100.1:CDS:1;Parent=LTnewLM_080016100.1 ### LTnewLM_8 . polypeptide 448755 450008 . + . ID=LTnewLM_080016100.1:pep;Derives_from=LTnewLM_080016100.1;orthologous_to=LmjF.08.1180_mRNA;ortholog_cluster=OG0007279;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 . pseudogene 450624 454543 . + . ID=LTnewLM_080016200:pseudogene;coverage=0.980;sequence_ID=0.949;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.08.1190_0;has_internal_stop=true LTnewLM_8 . pseudogenic_transcript 450624 454543 . + . ID=LTnewLM_080016200.1;Parent=LTnewLM_080016200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_8 . pseudogenic_exon 450624 454543 . + . ID=LTnewLM_080016200.1:pseudogenic_exon:1;Parent=LTnewLM_080016200.1;extra_copy_number=0 ### LTnewLM_8 . polypeptide 450624 454543 . + . ID=LTnewLM_080016200.1:pep;Derives_from=LTnewLM_080016200.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 455718 456305 1 + . ID=LTnewLM_080016300 LTnewLM_8 AUGUSTUS mRNA 455718 456305 1 + . ID=LTnewLM_080016300.1;Parent=LTnewLM_080016300 LTnewLM_8 AUGUSTUS CDS 455718 456305 1 + 0 ID=LTnewLM_080016300.1:CDS:1;Parent=LTnewLM_080016300.1 ### LTnewLM_8 . polypeptide 455718 456305 . + . ID=LTnewLM_080016300.1:pep;Derives_from=LTnewLM_080016300.1;orthologous_to=LmjF.08.1200_mRNA;ortholog_cluster=OG0007280;product=term%3DMitochondrial membrane-anchored proteins%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF18529 LTnewLM_8 Pfam protein_match 455847 456299 . + . Parent=LTnewLM_080016300.1:pep;Name=PF18529;signature_desc=Mitochondrial membrane-anchored proteins ### LTnewLM_8 AUGUSTUS gene 458697 459881 1 + . ID=LTnewLM_080016400 LTnewLM_8 AUGUSTUS mRNA 458697 459881 1 + . ID=LTnewLM_080016400.1;Parent=LTnewLM_080016400 LTnewLM_8 AUGUSTUS CDS 458697 459881 1 + 0 ID=LTnewLM_080016400.1:CDS:1;Parent=LTnewLM_080016400.1 ### LTnewLM_8 . polypeptide 458697 459881 . + . ID=LTnewLM_080016400.1:pep;Derives_from=LTnewLM_080016400.1;orthologous_to=LmjF.08.1210_mRNA;ortholog_cluster=OG0007281;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 461477 463207 1 + . ID=LTnewLM_080016500 LTnewLM_8 AUGUSTUS mRNA 461477 463207 1 + . ID=LTnewLM_080016500.1;Parent=LTnewLM_080016500 LTnewLM_8 AUGUSTUS CDS 461477 463207 1 + 0 ID=LTnewLM_080016500.1:CDS:1;Parent=LTnewLM_080016500.1 ### LTnewLM_8 . polypeptide 461477 463207 . + . ID=LTnewLM_080016500.1:pep;Derives_from=LTnewLM_080016500.1;orthologous_to=LTnewLM_080017200.1,LmjF.08.1215_mRNA,LmjF.08.1240_mRNA;ortholog_cluster=OG0000276;product=term%3DZinc finger%2C C3HC4 type (RING finger)/zinc-RING finger domain/RING-type zinc-finger/zinc finger of C3HC4-type%2C RING%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13923|Pfam:PF14634|Pfam:PF13445|Pfam:PF00097|Pfam:PF15227;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_8 Pfam protein_match 461852 461992 . + . Parent=LTnewLM_080016500.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_8 Pfam protein_match 461858 461989 . + . Parent=LTnewLM_080016500.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_8 Pfam protein_match 461858 461992 . + . Parent=LTnewLM_080016500.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_8 Pfam protein_match 461861 461983 . + . Parent=LTnewLM_080016500.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_8 Pfam protein_match 461861 461989 . + . Parent=LTnewLM_080016500.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_8 Pfam protein_match 461861 461989 . + . Parent=LTnewLM_080016500.1:pep;Name=PF15227;signature_desc=zinc finger of C3HC4-type%2C RING ### LTnewLM_8 AUGUSTUS gene 464524 466072 0.63 + . ID=LTnewLM_080016600 LTnewLM_8 AUGUSTUS mRNA 464524 466072 0.63 + . ID=LTnewLM_080016600.1;Parent=LTnewLM_080016600 LTnewLM_8 AUGUSTUS CDS 464524 465990 0.69 + 0 ID=LTnewLM_080016600.1:CDS:1;Parent=LTnewLM_080016600.1 LTnewLM_8 AUGUSTUS CDS 466064 466072 0.91 + 0 ID=LTnewLM_080016600.1:CDS:2;Parent=LTnewLM_080016600.1 ### LTnewLM_8 . polypeptide 464524 466072 . + . ID=LTnewLM_080016600.1:pep;Derives_from=LTnewLM_080016600.1;orthologous_to=LTnewLM_080017300.1,LmjF.08.1218_mRNA,LmjF.08.1250_mRNA;ortholog_cluster=OG0000277;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 467340 467639 1 + . ID=LTnewLM_080016700 LTnewLM_8 AUGUSTUS mRNA 467340 467639 1 + . ID=LTnewLM_080016700.1;Parent=LTnewLM_080016700 LTnewLM_8 AUGUSTUS CDS 467340 467639 1 + 0 ID=LTnewLM_080016700.1:CDS:1;Parent=LTnewLM_080016700.1 ### LTnewLM_8 . polypeptide 467340 467639 . + . ID=LTnewLM_080016700.1:pep;Derives_from=LTnewLM_080016700.1;product=term%3Dhypothetical protein ### LTnewLM_8 AUGUSTUS gene 469258 470565 1 + . ID=LTnewLM_080016800 LTnewLM_8 AUGUSTUS mRNA 469258 470565 1 + . ID=LTnewLM_080016800.1;Parent=LTnewLM_080016800 LTnewLM_8 AUGUSTUS CDS 469258 470565 1 + 0 ID=LTnewLM_080016800.1:CDS:1;Parent=LTnewLM_080016800.1 ### LTnewLM_8 . polypeptide 469258 470565 . + . ID=LTnewLM_080016800.1:pep;Derives_from=LTnewLM_080016800.1;orthologous_to=LTnewLM_080017500.1,LmjF.08.1265_mRNA_1;ortholog_cluster=OG0000501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 470980 471840 1 + . ID=LTnewLM_080016900 LTnewLM_8 AUGUSTUS mRNA 470980 471840 1 + . ID=LTnewLM_080016900.1;Parent=LTnewLM_080016900 LTnewLM_8 AUGUSTUS CDS 470980 471840 1 + 0 ID=LTnewLM_080016900.1:CDS:1;Parent=LTnewLM_080016900.1 ### LTnewLM_8 . polypeptide 470980 471840 . + . ID=LTnewLM_080016900.1:pep;Derives_from=LTnewLM_080016900.1;orthologous_to=LTnewLM_080017600.1,LmjF.08.1225_mRNA;ortholog_cluster=OG0000502;product=term%3DN%2CN dimethylarginine dimethylhydrolase%2C eukaryotic%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19420 LTnewLM_8 Pfam protein_match 471064 471501 . + . Parent=LTnewLM_080016900.1:pep;Name=PF19420;signature_desc=N%2CN dimethylarginine dimethylhydrolase%2C eukaryotic ### LTnewLM_8 AUGUSTUS gene 475155 477712 0.51 + . ID=LTnewLM_080017000 LTnewLM_8 AUGUSTUS mRNA 475155 477712 0.51 + . ID=LTnewLM_080017000.1;Parent=LTnewLM_080017000 LTnewLM_8 AUGUSTUS CDS 475155 477149 0.75 + 0 ID=LTnewLM_080017000.1:CDS:1;Parent=LTnewLM_080017000.1 LTnewLM_8 AUGUSTUS CDS 477269 477712 0.63 + 0 ID=LTnewLM_080017000.1:CDS:2;Parent=LTnewLM_080017000.1 ### LTnewLM_8 . polypeptide 475155 477712 . + . ID=LTnewLM_080017000.1:pep;Derives_from=LTnewLM_080017000.1;orthologous_to=LTnewLM_080017700.1,LmjF.08.1228_mRNA,LmjF.08.1280_mRNA;ortholog_cluster=OG0000278;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_8 Pfam protein_match 477150 477554 . + . Parent=LTnewLM_080017000.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 477153 477539 . + . Parent=LTnewLM_080017000.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_8 AUGUSTUS gene 478981 480312 1 + . ID=LTnewLM_080017100 LTnewLM_8 AUGUSTUS mRNA 478981 480312 1 + . ID=LTnewLM_080017100.1;Parent=LTnewLM_080017100 LTnewLM_8 AUGUSTUS CDS 478981 480312 1 + 0 ID=LTnewLM_080017100.1:CDS:1;Parent=LTnewLM_080017100.1 ### LTnewLM_8 . polypeptide 478981 480312 . + . ID=LTnewLM_080017100.1:pep;Derives_from=LTnewLM_080017100.1;orthologous_to=LTnewLM_080017800.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin/FtsZ family%2C GTPase domain/Tubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00091|Pfam:PF03953;Ontology_term=GO:0003924 LTnewLM_8 Pfam protein_match 478987 479610 . + . Parent=LTnewLM_080017100.1:pep;Name=PF00091;signature_desc=Tubulin/FtsZ family%2C GTPase domain;Ontology_term=GO:0003924 LTnewLM_8 Pfam protein_match 479761 480120 . + . Parent=LTnewLM_080017100.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_8 AUGUSTUS gene 484671 486401 1 + . ID=LTnewLM_080017200 LTnewLM_8 AUGUSTUS mRNA 484671 486401 1 + . ID=LTnewLM_080017200.1;Parent=LTnewLM_080017200 LTnewLM_8 AUGUSTUS CDS 484671 486401 1 + 0 ID=LTnewLM_080017200.1:CDS:1;Parent=LTnewLM_080017200.1 ### LTnewLM_8 . polypeptide 484671 486401 . + . ID=LTnewLM_080017200.1:pep;Derives_from=LTnewLM_080017200.1;orthologous_to=LTnewLM_080016500.1,LmjF.08.1215_mRNA,LmjF.08.1240_mRNA;ortholog_cluster=OG0000276;product=term%3DZinc finger%2C C3HC4 type (RING finger)/zinc-RING finger domain/RING-type zinc-finger/zinc finger of C3HC4-type%2C RING%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920|Pfam:PF13923|Pfam:PF14634|Pfam:PF13445|Pfam:PF00097|Pfam:PF15227;Ontology_term=GO:0005515,GO:0008270,GO:0046872 LTnewLM_8 Pfam protein_match 485046 485186 . + . Parent=LTnewLM_080017200.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_8 Pfam protein_match 485052 485183 . + . Parent=LTnewLM_080017200.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_8 Pfam protein_match 485052 485186 . + . Parent=LTnewLM_080017200.1:pep;Name=PF14634;signature_desc=zinc-RING finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_8 Pfam protein_match 485055 485177 . + . Parent=LTnewLM_080017200.1:pep;Name=PF13445;signature_desc=RING-type zinc-finger LTnewLM_8 Pfam protein_match 485055 485183 . + . Parent=LTnewLM_080017200.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_8 Pfam protein_match 485055 485183 . + . Parent=LTnewLM_080017200.1:pep;Name=PF15227;signature_desc=zinc finger of C3HC4-type%2C RING ### LTnewLM_8 AUGUSTUS gene 487709 489253 1 + . ID=LTnewLM_080017300 LTnewLM_8 AUGUSTUS mRNA 487709 489253 1 + . ID=LTnewLM_080017300.1;Parent=LTnewLM_080017300 LTnewLM_8 AUGUSTUS CDS 487709 489253 1 + 0 ID=LTnewLM_080017300.1:CDS:1;Parent=LTnewLM_080017300.1 ### LTnewLM_8 . polypeptide 487709 489253 . + . ID=LTnewLM_080017300.1:pep;Derives_from=LTnewLM_080017300.1;orthologous_to=LTnewLM_080016600.1,LmjF.08.1218_mRNA,LmjF.08.1250_mRNA;ortholog_cluster=OG0000277;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 490525 490824 1 + . ID=LTnewLM_080017400 LTnewLM_8 AUGUSTUS mRNA 490525 490824 1 + . ID=LTnewLM_080017400.1;Parent=LTnewLM_080017400 LTnewLM_8 AUGUSTUS CDS 490525 490824 1 + 0 ID=LTnewLM_080017400.1:CDS:1;Parent=LTnewLM_080017400.1 ### LTnewLM_8 . polypeptide 490525 490824 . + . ID=LTnewLM_080017400.1:pep;Derives_from=LTnewLM_080017400.1;orthologous_to=LmjF.08.1222_mRNA,LmjF.08.1260_mRNA;ortholog_cluster=OG0000503;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 492381 493688 1 + . ID=LTnewLM_080017500 LTnewLM_8 AUGUSTUS mRNA 492381 493688 1 + . ID=LTnewLM_080017500.1;Parent=LTnewLM_080017500 LTnewLM_8 AUGUSTUS CDS 492381 493688 1 + 0 ID=LTnewLM_080017500.1:CDS:1;Parent=LTnewLM_080017500.1 ### LTnewLM_8 . polypeptide 492381 493688 . + . ID=LTnewLM_080017500.1:pep;Derives_from=LTnewLM_080017500.1;orthologous_to=LTnewLM_080016800.1,LmjF.08.1265_mRNA_1;ortholog_cluster=OG0000501;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_8 AUGUSTUS gene 494103 494963 1 + . ID=LTnewLM_080017600 LTnewLM_8 AUGUSTUS mRNA 494103 494963 1 + . ID=LTnewLM_080017600.1;Parent=LTnewLM_080017600 LTnewLM_8 AUGUSTUS CDS 494103 494963 1 + 0 ID=LTnewLM_080017600.1:CDS:1;Parent=LTnewLM_080017600.1 ### LTnewLM_8 . polypeptide 494103 494963 . + . ID=LTnewLM_080017600.1:pep;Derives_from=LTnewLM_080017600.1;orthologous_to=LTnewLM_080016900.1,LmjF.08.1225_mRNA;ortholog_cluster=OG0000502;product=term%3DN%2CN dimethylarginine dimethylhydrolase%2C eukaryotic%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF19420 LTnewLM_8 Pfam protein_match 494187 494624 . + . Parent=LTnewLM_080017600.1:pep;Name=PF19420;signature_desc=N%2CN dimethylarginine dimethylhydrolase%2C eukaryotic ### LTnewLM_8 AUGUSTUS gene 498259 500817 1 + . ID=LTnewLM_080017700 LTnewLM_8 AUGUSTUS mRNA 498259 500817 1 + . ID=LTnewLM_080017700.1;Parent=LTnewLM_080017700 LTnewLM_8 AUGUSTUS CDS 498259 500817 1 + 0 ID=LTnewLM_080017700.1:CDS:1;Parent=LTnewLM_080017700.1 ### LTnewLM_8 . polypeptide 498259 500817 . + . ID=LTnewLM_080017700.1:pep;Derives_from=LTnewLM_080017700.1;orthologous_to=LTnewLM_080017000.1,LmjF.08.1228_mRNA,LmjF.08.1280_mRNA;ortholog_cluster=OG0000278;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_8 Pfam protein_match 499978 500778 . + . Parent=LTnewLM_080017700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_8 Pfam protein_match 500134 500763 . + . Parent=LTnewLM_080017700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_8 AUGUSTUS gene 501278 502114 0.68 + . ID=LTnewLM_080017800 LTnewLM_8 AUGUSTUS mRNA 501278 502114 0.68 + . ID=LTnewLM_080017800.1;Parent=LTnewLM_080017800 LTnewLM_8 AUGUSTUS CDS 501278 501284 0.68 + 0 ID=LTnewLM_080017800.1:CDS:1;Parent=LTnewLM_080017800.1 LTnewLM_8 AUGUSTUS CDS 501870 502114 0.99 + 2 ID=LTnewLM_080017800.1:CDS:2;Parent=LTnewLM_080017800.1 ### LTnewLM_8 . polypeptide 501278 502114 . + . ID=LTnewLM_080017800.1:pep;Derives_from=LTnewLM_080017800.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017900.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03953 LTnewLM_8 Pfam protein_match 501410 501514 . + . Parent=LTnewLM_080017800.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_8 . polypeptide 502202 502484 . + . ID=LTnewLM_080017900.1:pep;Derives_from=LTnewLM_080017900.1;orthologous_to=LTnewLM_080017100.1,LTnewLM_080017800.1,LTnewLM_210028400.1,LTnewLM_330014500.1,LTnewLM_330014600.1,LTnewLM_330014700.1,LTnewLM_330014800.1,LTnewLM_330014900.1,LTnewLM_330015000.1,LmjF.08.1230_mRNA,LmjF.21.1860_mRNA,LmjF.33.0792_mRNA,LmjF.33.0794_mRNA,LmjF.33.0796_mRNA,LmjF.33.0798_mRNA,LmjF.33.0800_mRNA,LmjF.33.0802_mRNA,LmjF.33.0804_mRNA,LmjF.33.0806_mRNA,LmjF.33.0808_mRNA,LmjF.33.0810_mRNA,LmjF.33.0812_mRNA,LmjF.33.0814_mRNA,LmjF.33.0816_mRNA,LmjF.33.0818_mRNA,LmjF.33.0819_mRNA,LmjF.33.0820_mRNA;ortholog_cluster=OG0000000;product=term%3DTubulin C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03953 LTnewLM_8 Pfam protein_match 502205 502354 . + . Parent=LTnewLM_080017900.1:pep;Name=PF03953;signature_desc=Tubulin C-terminal domain ### LTnewLM_8 AUGUSTUS gene 502202 502828 0.52 + . ID=LTnewLM_080017900;threeEndPartial=true;End_range=.,. LTnewLM_8 AUGUSTUS mRNA 502202 502828 0.52 + . ID=LTnewLM_080017900.1;Parent=LTnewLM_080017900 LTnewLM_8 AUGUSTUS CDS 502202 502484 0.52 + 0 ID=LTnewLM_080017900.1:CDS:1;Parent=LTnewLM_080017900.1 ### LTnewLM_9 AUGUSTUS gene 1 320 0.48 + . ID=LTnewLM_090005000;fiveEndPartial=true;Start_range=.,. LTnewLM_9 AUGUSTUS mRNA 1 320 0.48 + . ID=LTnewLM_090005000.1;Parent=LTnewLM_090005000 LTnewLM_9 AUGUSTUS CDS 246 320 0.48 + 0 ID=LTnewLM_090005000.1:CDS:1;Parent=LTnewLM_090005000.1 ### LTnewLM_9 . contig 1 567224 . + . Name=LTnewLM_CTG000043 LTnewLM_9 . polypeptide 246 320 . + . ID=LTnewLM_090005000.1:pep;Derives_from=LTnewLM_090005000.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 2076 2510 1 + . ID=LTnewLM_090005100 LTnewLM_9 AUGUSTUS mRNA 2076 2510 1 + . ID=LTnewLM_090005100.1;Parent=LTnewLM_090005100 LTnewLM_9 AUGUSTUS CDS 2076 2510 1 + 0 ID=LTnewLM_090005100.1:CDS:1;Parent=LTnewLM_090005100.1 ### LTnewLM_9 . polypeptide 2076 2510 . + . ID=LTnewLM_090005100.1:pep;Derives_from=LTnewLM_090005100.1;orthologous_to=LmjF.09.0003_mRNA;ortholog_cluster=OG0007282;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 3107 4228 1 + . ID=LTnewLM_090005200 LTnewLM_9 AUGUSTUS mRNA 3107 4228 1 + . ID=LTnewLM_090005200.1;Parent=LTnewLM_090005200 LTnewLM_9 AUGUSTUS CDS 3107 4228 1 + 0 ID=LTnewLM_090005200.1:CDS:1;Parent=LTnewLM_090005200.1 ### LTnewLM_9 . polypeptide 3107 4228 . + . ID=LTnewLM_090005200.1:pep;Derives_from=LTnewLM_090005200.1;orthologous_to=LmjF.09.0005_mRNA;ortholog_cluster=OG0007283;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 4882 5205 1 + . ID=LTnewLM_090005300 LTnewLM_9 AUGUSTUS mRNA 4882 5205 1 + . ID=LTnewLM_090005300.1;Parent=LTnewLM_090005300 LTnewLM_9 AUGUSTUS CDS 4882 5205 1 + 0 ID=LTnewLM_090005300.1:CDS:1;Parent=LTnewLM_090005300.1 ### LTnewLM_9 . polypeptide 4882 5205 . + . ID=LTnewLM_090005300.1:pep;Derives_from=LTnewLM_090005300.1;orthologous_to=LmjF.09.0010_mRNA;ortholog_cluster=OG0007284;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 6426 8285 1 + . ID=LTnewLM_090005400 LTnewLM_9 AUGUSTUS mRNA 6426 8285 1 + . ID=LTnewLM_090005400.1;Parent=LTnewLM_090005400 LTnewLM_9 AUGUSTUS CDS 6426 8285 1 + 0 ID=LTnewLM_090005400.1:CDS:1;Parent=LTnewLM_090005400.1 ### LTnewLM_9 . polypeptide 6426 8285 . + . ID=LTnewLM_090005400.1:pep;Derives_from=LTnewLM_090005400.1;orthologous_to=LmjF.09.0020_mRNA;ortholog_cluster=OG0007285;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 8730 9692 1 + . ID=LTnewLM_090005500 LTnewLM_9 AUGUSTUS mRNA 8730 9692 1 + . ID=LTnewLM_090005500.1;Parent=LTnewLM_090005500 LTnewLM_9 AUGUSTUS CDS 8730 9692 1 + 0 ID=LTnewLM_090005500.1:CDS:1;Parent=LTnewLM_090005500.1 ### LTnewLM_9 . polypeptide 8730 9692 . + . ID=LTnewLM_090005500.1:pep;Derives_from=LTnewLM_090005500.1;orthologous_to=LmjF.09.0030_mRNA;ortholog_cluster=OG0007286;product=term%3DPeroxisomal biogenesis factor 11 (PEX11)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05648;Ontology_term=GO:0016559,GO:0005779 LTnewLM_9 Pfam protein_match 8811 9674 . + . Parent=LTnewLM_090005500.1:pep;Name=PF05648;signature_desc=Peroxisomal biogenesis factor 11 (PEX11);Ontology_term=GO:0016559,GO:0005779 ### LTnewLM_9 AUGUSTUS gene 10385 11134 1 + . ID=LTnewLM_090005600 LTnewLM_9 AUGUSTUS mRNA 10385 11134 1 + . ID=LTnewLM_090005600.1;Parent=LTnewLM_090005600 LTnewLM_9 AUGUSTUS CDS 10385 11134 1 + 0 ID=LTnewLM_090005600.1:CDS:1;Parent=LTnewLM_090005600.1 ### LTnewLM_9 . polypeptide 10385 11134 . + . ID=LTnewLM_090005600.1:pep;Derives_from=LTnewLM_090005600.1;orthologous_to=LmjF.09.0040_mRNA;ortholog_cluster=OG0007287;product=term%3DGlcNAc-PI de-N-acetylase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02585 LTnewLM_9 Pfam protein_match 10490 10858 . + . Parent=LTnewLM_090005600.1:pep;Name=PF02585;signature_desc=GlcNAc-PI de-N-acetylase ### LTnewLM_9 AUGUSTUS gene 12900 13676 1 + . ID=LTnewLM_090005700 LTnewLM_9 AUGUSTUS mRNA 12900 13676 1 + . ID=LTnewLM_090005700.1;Parent=LTnewLM_090005700 LTnewLM_9 AUGUSTUS CDS 12900 13676 1 + 0 ID=LTnewLM_090005700.1:CDS:1;Parent=LTnewLM_090005700.1 ### LTnewLM_9 . polypeptide 12900 13676 . + . ID=LTnewLM_090005700.1:pep;Derives_from=LTnewLM_090005700.1;orthologous_to=LmjF.09.0050_mRNA;ortholog_cluster=OG0007288;product=term%3DHhH-GPD superfamily base excision DNA repair protein/Helix-hairpin-helix motif/Iron-sulfur binding domain of endonuclease III%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00730|Pfam:PF00633|Pfam:PF10576;Ontology_term=GO:0051539,GO:0006284,GO:0003677 LTnewLM_9 Pfam protein_match 13059 13469 . + . Parent=LTnewLM_090005700.1:pep;Name=PF00730;signature_desc=HhH-GPD superfamily base excision DNA repair protein;Ontology_term=GO:0006284 LTnewLM_9 Pfam protein_match 13257 13331 . + . Parent=LTnewLM_090005700.1:pep;Name=PF00633;signature_desc=Helix-hairpin-helix motif;Ontology_term=GO:0003677 LTnewLM_9 Pfam protein_match 13527 13574 . + . Parent=LTnewLM_090005700.1:pep;Name=PF10576;signature_desc=Iron-sulfur binding domain of endonuclease III;Ontology_term=GO:0051539 ### LTnewLM_9 AUGUSTUS gene 14334 14729 1 + . ID=LTnewLM_090005800 LTnewLM_9 AUGUSTUS mRNA 14334 14729 1 + . ID=LTnewLM_090005800.1;Parent=LTnewLM_090005800 LTnewLM_9 AUGUSTUS CDS 14334 14729 1 + 0 ID=LTnewLM_090005800.1:CDS:1;Parent=LTnewLM_090005800.1 ### LTnewLM_9 . polypeptide 14334 14729 . + . ID=LTnewLM_090005800.1:pep;Derives_from=LTnewLM_090005800.1;orthologous_to=LmjF.09.0060_mRNA;ortholog_cluster=OG0007289;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_9 Pfam protein_match 14364 14570 . + . Parent=LTnewLM_090005800.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_9 AUGUSTUS gene 16570 20511 1 + . ID=LTnewLM_090005900 LTnewLM_9 AUGUSTUS mRNA 16570 20511 1 + . ID=LTnewLM_090005900.1;Parent=LTnewLM_090005900 LTnewLM_9 AUGUSTUS CDS 16570 20511 1 + 0 ID=LTnewLM_090005900.1:CDS:1;Parent=LTnewLM_090005900.1 ### LTnewLM_9 . polypeptide 16570 20511 . + . ID=LTnewLM_090005900.1:pep;Derives_from=LTnewLM_090005900.1;orthologous_to=LmjF.09.0070_mRNA;ortholog_cluster=OG0007290;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain/Helicase associated domain (HA2)/Oligonucleotide/oligosaccharide-binding (OB)-fold%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271|Pfam:PF04408|Pfam:PF07717;Ontology_term=GO:0004386,GO:0003676,GO:0005524 LTnewLM_9 Pfam protein_match 17803 18264 . + . Parent=LTnewLM_090005900.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 LTnewLM_9 Pfam protein_match 18595 18987 . + . Parent=LTnewLM_090005900.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_9 Pfam protein_match 19180 19398 . + . Parent=LTnewLM_090005900.1:pep;Name=PF04408;signature_desc=Helicase associated domain (HA2);Ontology_term=GO:0004386 LTnewLM_9 Pfam protein_match 19735 20010 . + . Parent=LTnewLM_090005900.1:pep;Name=PF07717;signature_desc=Oligonucleotide/oligosaccharide-binding (OB)-fold ### LTnewLM_9 AUGUSTUS gene 21889 22626 1 + . ID=LTnewLM_090006000 LTnewLM_9 AUGUSTUS mRNA 21889 22626 1 + . ID=LTnewLM_090006000.1;Parent=LTnewLM_090006000 LTnewLM_9 AUGUSTUS CDS 21889 22626 1 + 0 ID=LTnewLM_090006000.1:CDS:1;Parent=LTnewLM_090006000.1 ### LTnewLM_9 . polypeptide 21889 22626 . + . ID=LTnewLM_090006000.1:pep;Derives_from=LTnewLM_090006000.1;orthologous_to=LmjF.09.0080_mRNA;ortholog_cluster=OG0007291;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_9 Pfam protein_match 21952 22158 . + . Parent=LTnewLM_090006000.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_9 AUGUSTUS gene 33535 34434 1 + . ID=LTnewLM_090006100 LTnewLM_9 AUGUSTUS mRNA 33535 34434 1 + . ID=LTnewLM_090006100.1;Parent=LTnewLM_090006100 LTnewLM_9 AUGUSTUS CDS 33535 34434 1 + 0 ID=LTnewLM_090006100.1:CDS:1;Parent=LTnewLM_090006100.1 ### LTnewLM_9 . polypeptide 33535 34434 . + . ID=LTnewLM_090006100.1:pep;Derives_from=LTnewLM_090006100.1;orthologous_to=LmjF.09.0090_mRNA;ortholog_cluster=OG0007292;product=term%3DRNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00076;Ontology_term=GO:0003676 LTnewLM_9 Pfam protein_match 33850 34056 . + . Parent=LTnewLM_090006100.1:pep;Name=PF00076;signature_desc=RNA recognition motif. (a.k.a. RRM%2C RBD%2C or RNP domain);Ontology_term=GO:0003676 ### LTnewLM_9 AUGUSTUS gene 46716 48464 1 + . ID=LTnewLM_090006200 LTnewLM_9 AUGUSTUS mRNA 46716 48464 1 + . ID=LTnewLM_090006200.1;Parent=LTnewLM_090006200 LTnewLM_9 AUGUSTUS CDS 46716 48464 1 + 0 ID=LTnewLM_090006200.1:CDS:1;Parent=LTnewLM_090006200.1 ### LTnewLM_9 . polypeptide 46716 48464 . + . ID=LTnewLM_090006200.1:pep;Derives_from=LTnewLM_090006200.1;orthologous_to=LmjF.09.0100_mRNA;ortholog_cluster=OG0007293;product=term%3DEF-hand domain pair%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13499 LTnewLM_9 Pfam protein_match 47238 47426 . + . Parent=LTnewLM_090006200.1:pep;Name=PF13499;signature_desc=EF-hand domain pair ### LTnewLM_9 AUGUSTUS gene 50910 51575 1 + . ID=LTnewLM_090006300 LTnewLM_9 AUGUSTUS mRNA 50910 51575 1 + . ID=LTnewLM_090006300.1;Parent=LTnewLM_090006300 LTnewLM_9 AUGUSTUS CDS 50910 51575 1 + 0 ID=LTnewLM_090006300.1:CDS:1;Parent=LTnewLM_090006300.1 ### LTnewLM_9 . polypeptide 50910 51575 . + . ID=LTnewLM_090006300.1:pep;Derives_from=LTnewLM_090006300.1;orthologous_to=LmjF.09.0105_mRNA;ortholog_cluster=OG0007294;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 52455 54732 . + . ID=LTnewLM_090006400:pseudogene;coverage=0.998;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0110_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 52455 54732 . + . ID=LTnewLM_090006400.1;Parent=LTnewLM_090006400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 52455 54732 . + . ID=LTnewLM_090006400.1:pseudogenic_exon:1;Parent=LTnewLM_090006400.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 52455 54732 . + . ID=LTnewLM_090006400.1:pep;Derives_from=LTnewLM_090006400.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 55657 58911 1 + . ID=LTnewLM_090006500 LTnewLM_9 AUGUSTUS mRNA 55657 58911 1 + . ID=LTnewLM_090006500.1;Parent=LTnewLM_090006500 LTnewLM_9 AUGUSTUS CDS 55657 58911 1 + 0 ID=LTnewLM_090006500.1:CDS:1;Parent=LTnewLM_090006500.1 ### LTnewLM_9 . polypeptide 55657 58911 . + . ID=LTnewLM_090006500.1:pep;Derives_from=LTnewLM_090006500.1;orthologous_to=LmjF.09.0120_mRNA;ortholog_cluster=OG0007295;product=term%3DMicrotubule binding/Kinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16796|Pfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_9 Pfam protein_match 55675 56106 . + . Parent=LTnewLM_090006500.1:pep;Name=PF16796;signature_desc=Microtubule binding LTnewLM_9 Pfam protein_match 55720 56538 . + . Parent=LTnewLM_090006500.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_9 Pfam protein_match 56614 56853 . + . Parent=LTnewLM_090006500.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_9 AUGUSTUS gene 61008 62582 1 + . ID=LTnewLM_090006600 LTnewLM_9 AUGUSTUS mRNA 61008 62582 1 + . ID=LTnewLM_090006600.1;Parent=LTnewLM_090006600 LTnewLM_9 AUGUSTUS CDS 61008 62582 1 + 0 ID=LTnewLM_090006600.1:CDS:1;Parent=LTnewLM_090006600.1 ### LTnewLM_9 . polypeptide 61008 62582 . + . ID=LTnewLM_090006600.1:pep;Derives_from=LTnewLM_090006600.1;orthologous_to=LmjF.09.0140_mRNA;ortholog_cluster=OG0007296;product=term%3DFHA domain/Zinc finger%2C C3HC4 type (RING finger)/Cysteine rich domain with multizinc binding regions/PBZ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF17913|Pfam:PF00498|Pfam:PF00097|Pfam:PF13923|Pfam:PF17979|Pfam:PF10283;Ontology_term=GO:0046872,GO:0005515 LTnewLM_9 Pfam protein_match 61149 61409 . + . Parent=LTnewLM_090006600.1:pep;Name=PF17913;signature_desc=FHA domain LTnewLM_9 Pfam protein_match 61203 61406 . + . Parent=LTnewLM_090006600.1:pep;Name=PF00498;signature_desc=FHA domain;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 61554 61673 . + . Parent=LTnewLM_090006600.1:pep;Name=PF00097;signature_desc=Zinc finger%2C C3HC4 type (RING finger);Ontology_term=GO:0046872 LTnewLM_9 Pfam protein_match 61554 61673 . + . Parent=LTnewLM_090006600.1:pep;Name=PF13923;signature_desc=Zinc finger%2C C3HC4 type (RING finger) LTnewLM_9 Pfam protein_match 61971 62441 . + . Parent=LTnewLM_090006600.1:pep;Name=PF17979;signature_desc=Cysteine rich domain with multizinc binding regions LTnewLM_9 Pfam protein_match 62478 62549 . + . Parent=LTnewLM_090006600.1:pep;Name=PF10283;signature_desc=PBZ domain ### LTnewLM_9 AUGUSTUS gene 63476 63850 1 + . ID=LTnewLM_090006700 LTnewLM_9 AUGUSTUS mRNA 63476 63850 1 + . ID=LTnewLM_090006700.1;Parent=LTnewLM_090006700 LTnewLM_9 AUGUSTUS CDS 63476 63850 1 + 0 ID=LTnewLM_090006700.1:CDS:1;Parent=LTnewLM_090006700.1 ### LTnewLM_9 . polypeptide 63476 63850 . + . ID=LTnewLM_090006700.1:pep;Derives_from=LTnewLM_090006700.1;orthologous_to=LmjF.09.0152_mRNA;ortholog_cluster=OG0007297;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 65045 65446 685 + . ID=LTnewLM_090006800:pseudogene;has_internal_stop=true;has_frameshift=false;has_start=true;Target=LmjF.09.0150:mRNA 1 133;original_prot_length=135 LTnewLM_9 . pseudogenic_transcript 65045 65446 . + . ID=LTnewLM_090006800.1;Parent=LTnewLM_090006800:pseudogene LTnewLM_9 . pseudogenic_exon 65045 65446 . + . ID=LTnewLM_090006800.1:pseudogenic_exon:1;Parent=LTnewLM_090006800.1 ### LTnewLM_9 . polypeptide 65045 65446 . + . ID=LTnewLM_090006800.1:pep;Derives_from=LTnewLM_090006800.1;orthologous_to=LTnewLM_090007000.1;ortholog_cluster=OG0007729;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 66610 67014 1 + . ID=LTnewLM_090006900 LTnewLM_9 AUGUSTUS mRNA 66610 67014 1 + . ID=LTnewLM_090006900.1;Parent=LTnewLM_090006900 LTnewLM_9 AUGUSTUS CDS 66610 67014 1 + 0 ID=LTnewLM_090006900.1:CDS:1;Parent=LTnewLM_090006900.1 ### LTnewLM_9 . polypeptide 66610 67014 . + . ID=LTnewLM_090006900.1:pep;Derives_from=LTnewLM_090006900.1;orthologous_to=LTnewLM_090007100.1,LmjF.09.0170_mRNA;ortholog_cluster=OG0000504;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 68112 68513 685 + . ID=LTnewLM_090007000:pseudogene;has_internal_stop=true;has_frameshift=false;has_start=true;Target=LmjF.09.0150:mRNA 1 133;original_prot_length=135 LTnewLM_9 . pseudogenic_transcript 68112 68513 . + . ID=LTnewLM_090007000.1;Parent=LTnewLM_090007000:pseudogene LTnewLM_9 . pseudogenic_exon 68112 68513 . + . ID=LTnewLM_090007000.1:pseudogenic_exon:1;Parent=LTnewLM_090007000.1 ### LTnewLM_9 . polypeptide 68112 68513 . + . ID=LTnewLM_090007000.1:pep;Derives_from=LTnewLM_090007000.1;orthologous_to=LTnewLM_090006800.1;ortholog_cluster=OG0007729;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 69675 70079 1 + . ID=LTnewLM_090007100 LTnewLM_9 AUGUSTUS mRNA 69675 70079 1 + . ID=LTnewLM_090007100.1;Parent=LTnewLM_090007100 LTnewLM_9 AUGUSTUS CDS 69675 70079 1 + 0 ID=LTnewLM_090007100.1:CDS:1;Parent=LTnewLM_090007100.1 ### LTnewLM_9 . polypeptide 69675 70079 . + . ID=LTnewLM_090007100.1:pep;Derives_from=LTnewLM_090007100.1;orthologous_to=LTnewLM_090006900.1,LmjF.09.0170_mRNA;ortholog_cluster=OG0000504;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 71176 71550 1 + . ID=LTnewLM_090007200 LTnewLM_9 AUGUSTUS mRNA 71176 71550 1 + . ID=LTnewLM_090007200.1;Parent=LTnewLM_090007200 LTnewLM_9 AUGUSTUS CDS 71176 71550 1 + 0 ID=LTnewLM_090007200.1:CDS:1;Parent=LTnewLM_090007200.1 ### LTnewLM_9 . polypeptide 71176 71550 . + . ID=LTnewLM_090007200.1:pep;Derives_from=LTnewLM_090007200.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 72577 72939 1 + . ID=LTnewLM_090007300 LTnewLM_9 AUGUSTUS mRNA 72577 72939 1 + . ID=LTnewLM_090007300.1;Parent=LTnewLM_090007300 LTnewLM_9 AUGUSTUS CDS 72577 72939 1 + 0 ID=LTnewLM_090007300.1:CDS:1;Parent=LTnewLM_090007300.1 ### LTnewLM_9 . polypeptide 72577 72939 . + . ID=LTnewLM_090007300.1:pep;Derives_from=LTnewLM_090007300.1;orthologous_to=LmjF.09.0190_mRNA;ortholog_cluster=OG0007298;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 74139 75659 . + . ID=LTnewLM_090007400:pseudogene;coverage=0.998;sequence_ID=0.948;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0200_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 74139 75659 . + . ID=LTnewLM_090007400.1;Parent=LTnewLM_090007400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 74139 75659 . + . ID=LTnewLM_090007400.1:pseudogenic_exon:1;Parent=LTnewLM_090007400.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 74139 75659 . + . ID=LTnewLM_090007400.1:pep;Derives_from=LTnewLM_090007400.1;orthologous_to=LmjF.09.0200_mRNA;ortholog_cluster=OG0007730;product=term%3DTransport and Golgi organisation 2%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05742 LTnewLM_9 Pfam protein_match 74139 74354 . + . Parent=LTnewLM_090007400.1:pep;Name=PF05742;signature_desc=Transport and Golgi organisation 2 ### LTnewLM_9 AUGUSTUS gene 76152 77069 1 + . ID=LTnewLM_090007500 LTnewLM_9 AUGUSTUS mRNA 76152 77069 1 + . ID=LTnewLM_090007500.1;Parent=LTnewLM_090007500 LTnewLM_9 AUGUSTUS CDS 76152 77069 1 + 0 ID=LTnewLM_090007500.1:CDS:1;Parent=LTnewLM_090007500.1 ### LTnewLM_9 . polypeptide 76152 77069 . + . ID=LTnewLM_090007500.1:pep;Derives_from=LTnewLM_090007500.1;orthologous_to=LmjF.09.0210_mRNA;ortholog_cluster=OG0007299;product=term%3DDomain of unknown function (DUF4586)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF15239 LTnewLM_9 Pfam protein_match 76152 77000 . + . Parent=LTnewLM_090007500.1:pep;Name=PF15239;signature_desc=Domain of unknown function (DUF4586) ### LTnewLM_9 AUGUSTUS gene 79253 81694 1 + . ID=LTnewLM_090007600 LTnewLM_9 AUGUSTUS mRNA 79253 81694 1 + . ID=LTnewLM_090007600.1;Parent=LTnewLM_090007600 LTnewLM_9 AUGUSTUS CDS 79253 81694 1 + 0 ID=LTnewLM_090007600.1:CDS:1;Parent=LTnewLM_090007600.1 ### LTnewLM_9 . polypeptide 79253 81694 . + . ID=LTnewLM_090007600.1:pep;Derives_from=LTnewLM_090007600.1;orthologous_to=LmjF.09.0220_mRNA;ortholog_cluster=OG0007300;product=term%3DVTC domain/Domain of unknown function (DUF202)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09359|Pfam:PF02656 LTnewLM_9 Pfam protein_match 79886 80698 . + . Parent=LTnewLM_090007600.1:pep;Name=PF09359;signature_desc=VTC domain LTnewLM_9 Pfam protein_match 81311 81541 . + . Parent=LTnewLM_090007600.1:pep;Name=PF02656;signature_desc=Domain of unknown function (DUF202) ### LTnewLM_9 AUGUSTUS gene 82759 84270 1 + . ID=LTnewLM_090007700 LTnewLM_9 AUGUSTUS mRNA 82759 84270 1 + . ID=LTnewLM_090007700.1;Parent=LTnewLM_090007700 LTnewLM_9 AUGUSTUS CDS 82759 84270 1 + 0 ID=LTnewLM_090007700.1:CDS:1;Parent=LTnewLM_090007700.1 ### LTnewLM_9 . polypeptide 82759 84270 . + . ID=LTnewLM_090007700.1:pep;Derives_from=LTnewLM_090007700.1;orthologous_to=LmjF.09.0230_mRNA;ortholog_cluster=OG0007301;product=term%3DAAA domain (dynein-related subfamily)/ATPase family associated with various cellular activities (AAA)/AAA domain (Cdc48 subfamily)/C-terminal%2C D2-small domain%2C of ClpB protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07728|Pfam:PF00004|Pfam:PF07724|Pfam:PF10431;Ontology_term=GO:0016887,GO:0005524 LTnewLM_9 Pfam protein_match 83014 83121 . + . Parent=LTnewLM_090007700.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_9 Pfam protein_match 83017 83178 . + . Parent=LTnewLM_090007700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 83569 83922 . + . Parent=LTnewLM_090007700.1:pep;Name=PF07724;signature_desc=AAA domain (Cdc48 subfamily);Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 83617 83838 . + . Parent=LTnewLM_090007700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 83941 84147 . + . Parent=LTnewLM_090007700.1:pep;Name=PF10431;signature_desc=C-terminal%2C D2-small domain%2C of ClpB protein ### LTnewLM_9 AUGUSTUS gene 85872 88721 1 + . ID=LTnewLM_090007800 LTnewLM_9 AUGUSTUS mRNA 85872 88721 1 + . ID=LTnewLM_090007800.1;Parent=LTnewLM_090007800 LTnewLM_9 AUGUSTUS CDS 85872 88721 1 + 0 ID=LTnewLM_090007800.1:CDS:1;Parent=LTnewLM_090007800.1 ### LTnewLM_9 . polypeptide 85872 88721 . + . ID=LTnewLM_090007800.1:pep;Derives_from=LTnewLM_090007800.1;orthologous_to=LmjF.09.0240_mRNA;ortholog_cluster=OG0007302;product=term%3DUbiquitin carboxyl-terminal hydrolase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00443;Ontology_term=GO:0006511,GO:0036459 LTnewLM_9 Pfam protein_match 86397 88112 . + . Parent=LTnewLM_090007800.1:pep;Name=PF00443;signature_desc=Ubiquitin carboxyl-terminal hydrolase;Ontology_term=GO:0036459,GO:0006511 ### LTnewLM_9 Liftoff gene 89488 92445 . + . ID=LTnewLM_090007900;coverage=1.0;sequence_ID=0.957;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.0250_0 LTnewLM_9 Liftoff mRNA 89488 92445 . + . ID=LTnewLM_090007900.1;Parent=LTnewLM_090007900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 89488 92445 . + 0 ID=LTnewLM_090007900.1:CDS:1;Parent=LTnewLM_090007900.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 89488 92445 . + . ID=LTnewLM_090007900.1:pep;Derives_from=LTnewLM_090007900.1;orthologous_to=LmjF.09.0250_mRNA;ortholog_cluster=OG0007303;product=term%3DMCM N-terminal domain/MCM OB domain/MCM P-loop domain/AAA domain (dynein-related subfamily)/Magnesium chelatase%2C subunit ChlI/MCM AAA-lid domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14551|Pfam:PF17207|Pfam:PF00493|Pfam:PF07728|Pfam:PF01078|Pfam:PF17855;Ontology_term=GO:0015979,GO:0015995,GO:0005524,GO:0016851,GO:0006260,GO:0016887,GO:0003677 LTnewLM_9 Pfam protein_match 89824 90153 . + . Parent=LTnewLM_090007900.1:pep;Name=PF14551;signature_desc=MCM N-terminal domain LTnewLM_9 Pfam protein_match 90238 90618 . + . Parent=LTnewLM_090007900.1:pep;Name=PF17207;signature_desc=MCM OB domain LTnewLM_9 Pfam protein_match 90862 91569 . + . Parent=LTnewLM_090007900.1:pep;Name=PF00493;signature_desc=MCM P-loop domain;Ontology_term=GO:0003677,GO:0005524,GO:0006260 LTnewLM_9 Pfam protein_match 91075 91437 . + . Parent=LTnewLM_090007900.1:pep;Name=PF07728;signature_desc=AAA domain (dynein-related subfamily);Ontology_term=GO:0005524,GO:0016887 LTnewLM_9 Pfam protein_match 91231 91425 . + . Parent=LTnewLM_090007900.1:pep;Name=PF01078;signature_desc=Magnesium chelatase%2C subunit ChlI;Ontology_term=GO:0016851,GO:0015979,GO:0015995 LTnewLM_9 Pfam protein_match 91873 92118 . + . Parent=LTnewLM_090007900.1:pep;Name=PF17855;signature_desc=MCM AAA-lid domain ### LTnewLM_9 AUGUSTUS gene 92807 93625 1 + . ID=LTnewLM_090008000 LTnewLM_9 AUGUSTUS mRNA 92807 93625 1 + . ID=LTnewLM_090008000.1;Parent=LTnewLM_090008000 LTnewLM_9 AUGUSTUS CDS 92807 93625 1 + 0 ID=LTnewLM_090008000.1:CDS:1;Parent=LTnewLM_090008000.1 ### LTnewLM_9 . polypeptide 92807 93625 . + . ID=LTnewLM_090008000.1:pep;Derives_from=LTnewLM_090008000.1;orthologous_to=LmjF.09.0260_mRNA;ortholog_cluster=OG0007304;product=term%3DG10 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01125;Ontology_term=GO:0005634 LTnewLM_9 Pfam protein_match 92807 93520 . + . Parent=LTnewLM_090008000.1:pep;Name=PF01125;signature_desc=G10 protein;Ontology_term=GO:0005634 ### LTnewLM_9 AUGUSTUS gene 95968 97833 1 + . ID=LTnewLM_090008100 LTnewLM_9 AUGUSTUS mRNA 95968 97833 1 + . ID=LTnewLM_090008100.1;Parent=LTnewLM_090008100 LTnewLM_9 AUGUSTUS CDS 95968 97833 1 + 0 ID=LTnewLM_090008100.1:CDS:1;Parent=LTnewLM_090008100.1 ### LTnewLM_9 . polypeptide 95968 97833 . + . ID=LTnewLM_090008100.1:pep;Derives_from=LTnewLM_090008100.1;orthologous_to=LmjF.09.0270_mRNA;ortholog_cluster=OG0007305;product=term%3DMajor Facilitator Superfamily%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF07690;Ontology_term=GO:0016021,GO:0055085 LTnewLM_9 Pfam protein_match 96106 96579 . + . Parent=LTnewLM_090008100.1:pep;Name=PF07690;signature_desc=Major Facilitator Superfamily;Ontology_term=GO:0055085,GO:0016021 ### LTnewLM_9 AUGUSTUS gene 100411 102735 1 + . ID=LTnewLM_090008200 LTnewLM_9 AUGUSTUS mRNA 100411 102735 1 + . ID=LTnewLM_090008200.1;Parent=LTnewLM_090008200 LTnewLM_9 AUGUSTUS CDS 100411 102735 1 + 0 ID=LTnewLM_090008200.1:CDS:1;Parent=LTnewLM_090008200.1 ### LTnewLM_9 . polypeptide 100411 102735 . + . ID=LTnewLM_090008200.1:pep;Derives_from=LTnewLM_090008200.1;orthologous_to=LmjF.09.0280_mRNA;ortholog_cluster=OG0007306;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 103631 107500 1 + . ID=LTnewLM_090008300 LTnewLM_9 AUGUSTUS mRNA 103631 107500 1 + . ID=LTnewLM_090008300.1;Parent=LTnewLM_090008300 LTnewLM_9 AUGUSTUS CDS 103631 107500 1 + 0 ID=LTnewLM_090008300.1:CDS:1;Parent=LTnewLM_090008300.1 ### LTnewLM_9 . polypeptide 103631 107500 . + . ID=LTnewLM_090008300.1:pep;Derives_from=LTnewLM_090008300.1;orthologous_to=LmjF.09.0290_mRNA;ortholog_cluster=OG0007307;product=term%3DKinesin motor domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00225;Ontology_term=GO:0007018,GO:0008017,GO:0003777,GO:0005524 LTnewLM_9 Pfam protein_match 104042 104302 . + . Parent=LTnewLM_090008300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 LTnewLM_9 Pfam protein_match 104669 104920 . + . Parent=LTnewLM_090008300.1:pep;Name=PF00225;signature_desc=Kinesin motor domain;Ontology_term=GO:0003777,GO:0005524,GO:0008017,GO:0007018 ### LTnewLM_9 AUGUSTUS gene 108332 109039 1 + . ID=LTnewLM_090008400 LTnewLM_9 AUGUSTUS mRNA 108332 109039 1 + . ID=LTnewLM_090008400.1;Parent=LTnewLM_090008400 LTnewLM_9 AUGUSTUS CDS 108332 109039 1 + 0 ID=LTnewLM_090008400.1:CDS:1;Parent=LTnewLM_090008400.1 ### LTnewLM_9 . polypeptide 108332 109039 . + . ID=LTnewLM_090008400.1:pep;Derives_from=LTnewLM_090008400.1;orthologous_to=LmjF.09.0300_mRNA;ortholog_cluster=OG0007308;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 109878 112529 4.55e+03 + . ID=LTnewLM_090008500:pseudogene;has_internal_stop=false;has_frameshift=false;has_stop=true;Target=LmjF.09.0310:mRNA 2 888;original_prot_length=888 LTnewLM_9 . pseudogenic_transcript 109878 112529 . + . ID=LTnewLM_090008500.1;Parent=LTnewLM_090008500:pseudogene LTnewLM_9 . pseudogenic_exon 109878 112529 . + . ID=LTnewLM_090008500.1:pseudogenic_exon:1;Parent=LTnewLM_090008500.1 ### LTnewLM_9 . polypeptide 109878 112529 . + . ID=LTnewLM_090008500.1:pep;Derives_from=LTnewLM_090008500.1;orthologous_to=LmjF.09.0310_mRNA;ortholog_cluster=OG0007731;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_9 Pfam protein_match 111258 112379 . + . Parent=LTnewLM_090008500.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_9 Pfam protein_match 111261 111974 . + . Parent=LTnewLM_090008500.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_9 AUGUSTUS gene 114025 116784 1 + . ID=LTnewLM_090008600 LTnewLM_9 AUGUSTUS mRNA 114025 116784 1 + . ID=LTnewLM_090008600.1;Parent=LTnewLM_090008600 LTnewLM_9 AUGUSTUS CDS 114025 116784 1 + 0 ID=LTnewLM_090008600.1:CDS:1;Parent=LTnewLM_090008600.1 ### LTnewLM_9 . polypeptide 114025 116784 . + . ID=LTnewLM_090008600.1:pep;Derives_from=LTnewLM_090008600.1;orthologous_to=LmjF.09.0320_mRNA;ortholog_cluster=OG0007309;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 119293 121845 1 + . ID=LTnewLM_090008700 LTnewLM_9 AUGUSTUS mRNA 119293 121845 1 + . ID=LTnewLM_090008700.1;Parent=LTnewLM_090008700 LTnewLM_9 AUGUSTUS CDS 119293 121845 1 + 0 ID=LTnewLM_090008700.1:CDS:1;Parent=LTnewLM_090008700.1 ### LTnewLM_9 . polypeptide 119293 121845 . + . ID=LTnewLM_090008700.1:pep;Derives_from=LTnewLM_090008700.1;orthologous_to=LmjF.09.0330_mRNA;ortholog_cluster=OG0007310;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 124050 127241 . + . ID=LTnewLM_090008800:pseudogene;coverage=0.999;sequence_ID=0.951;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0340_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 124050 127241 . + . ID=LTnewLM_090008800.1;Parent=LTnewLM_090008800:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 124050 127241 . + . ID=LTnewLM_090008800.1:pseudogenic_exon:1;Parent=LTnewLM_090008800.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 124050 127241 . + . ID=LTnewLM_090008800.1:pep;Derives_from=LTnewLM_090008800.1;orthologous_to=LmjF.09.0340_mRNA;ortholog_cluster=OG0007732;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 128386 129148 0.9 + . ID=LTnewLM_090008900 LTnewLM_9 AUGUSTUS mRNA 128386 129148 0.9 + . ID=LTnewLM_090008900.1;Parent=LTnewLM_090008900 LTnewLM_9 AUGUSTUS CDS 128386 128721 0.99 + 0 ID=LTnewLM_090008900.1:CDS:1;Parent=LTnewLM_090008900.1 LTnewLM_9 AUGUSTUS CDS 128795 129148 0.9 + 0 ID=LTnewLM_090008900.1:CDS:2;Parent=LTnewLM_090008900.1 ### LTnewLM_9 . polypeptide 128386 129148 . + . ID=LTnewLM_090008900.1:pep;Derives_from=LTnewLM_090008900.1;orthologous_to=LmjF.09.0345_mRNA;ortholog_cluster=OG0007311;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 129938 132532 1 + . ID=LTnewLM_090009000 LTnewLM_9 AUGUSTUS mRNA 129938 132532 1 + . ID=LTnewLM_090009000.1;Parent=LTnewLM_090009000 LTnewLM_9 AUGUSTUS CDS 129938 132532 1 + 0 ID=LTnewLM_090009000.1:CDS:1;Parent=LTnewLM_090009000.1 ### LTnewLM_9 . polypeptide 129938 132532 . + . ID=LTnewLM_090009000.1:pep;Derives_from=LTnewLM_090009000.1;orthologous_to=LmjF.09.0350_mRNA;ortholog_cluster=OG0007312;product=term%3DRing finger domain/RING-H2 zinc finger domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13639|Pfam:PF12678;Ontology_term=GO:0008270,GO:0005515 LTnewLM_9 Pfam protein_match 132401 132496 . + . Parent=LTnewLM_090009000.1:pep;Name=PF13639;signature_desc=Ring finger domain;Ontology_term=GO:0005515,GO:0008270 LTnewLM_9 Pfam protein_match 132410 132496 . + . Parent=LTnewLM_090009000.1:pep;Name=PF12678;signature_desc=RING-H2 zinc finger domain;Ontology_term=GO:0008270 ### LTnewLM_9 . polypeptide 133331 135137 . + . ID=LTnewLM_090009100.1:pep;Derives_from=LTnewLM_090009100.1;orthologous_to=LTnewLM_090009100.2,LmjF.09.0360_mRNA;ortholog_cluster=OG0000505;product=term%3DDNA photolyase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00875 LTnewLM_9 Pfam protein_match 134453 134881 . + . Parent=LTnewLM_090009100.1:pep;Name=PF00875;signature_desc=DNA photolyase ### LTnewLM_9 AUGUSTUS gene 133331 136561 1.51 + . ID=LTnewLM_090009100 LTnewLM_9 AUGUSTUS mRNA 133331 135137 0.51 + . ID=LTnewLM_090009100.1;Parent=LTnewLM_090009100 LTnewLM_9 AUGUSTUS CDS 133331 135011 0.51 + 0 ID=LTnewLM_090009100.1:CDS:1;Parent=LTnewLM_090009100.1 LTnewLM_9 AUGUSTUS CDS 135088 135137 0.79 + 2 ID=LTnewLM_090009100.1:CDS:2;Parent=LTnewLM_090009100.1 LTnewLM_9 AUGUSTUS mRNA 133331 136561 1 + . ID=LTnewLM_090009100.2;Parent=LTnewLM_090009100 LTnewLM_9 AUGUSTUS CDS 133331 136561 1 + 0 ID=LTnewLM_090009100.2:CDS:1;Parent=LTnewLM_090009100.2 ### LTnewLM_9 . polypeptide 133331 136561 . + . ID=LTnewLM_090009100.2:pep;Derives_from=LTnewLM_090009100.2;orthologous_to=LTnewLM_090009100.1,LmjF.09.0360_mRNA;ortholog_cluster=OG0000505;product=term%3DDNA photolyase/FAD binding domain of DNA photolyase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00875|Pfam:PF03441;Ontology_term=GO:0003913,GO:0006281 LTnewLM_9 Pfam protein_match 134453 134881 . + . Parent=LTnewLM_090009100.2:pep;Name=PF00875;signature_desc=DNA photolyase LTnewLM_9 Pfam protein_match 135755 136228 . + . Parent=LTnewLM_090009100.2:pep;Name=PF03441;signature_desc=FAD binding domain of DNA photolyase;Ontology_term=GO:0003913,GO:0006281 ### LTnewLM_9 AUGUSTUS gene 137270 137902 1 + . ID=LTnewLM_090009200 LTnewLM_9 AUGUSTUS mRNA 137270 137902 1 + . ID=LTnewLM_090009200.1;Parent=LTnewLM_090009200 LTnewLM_9 AUGUSTUS CDS 137270 137902 1 + 0 ID=LTnewLM_090009200.1:CDS:1;Parent=LTnewLM_090009200.1 ### LTnewLM_9 . polypeptide 137270 137902 . + . ID=LTnewLM_090009200.1:pep;Derives_from=LTnewLM_090009200.1;orthologous_to=LmjF.09.0365_mRNA;ortholog_cluster=OG0007313;product=term%3DAnkyrin repeats (many copies)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13637 LTnewLM_9 Pfam protein_match 137729 137878 . + . Parent=LTnewLM_090009200.1:pep;Name=PF13637;signature_desc=Ankyrin repeats (many copies) ### LTnewLM_9 AUGUSTUS gene 139124 139387 1 + . ID=LTnewLM_090009300 LTnewLM_9 AUGUSTUS mRNA 139124 139387 1 + . ID=LTnewLM_090009300.1;Parent=LTnewLM_090009300 LTnewLM_9 AUGUSTUS CDS 139124 139387 1 + 0 ID=LTnewLM_090009300.1:CDS:1;Parent=LTnewLM_090009300.1 ### LTnewLM_9 . polypeptide 139124 139387 . + . ID=LTnewLM_090009300.1:pep;Derives_from=LTnewLM_090009300.1;orthologous_to=LmjF.09.0367_mRNA;ortholog_cluster=OG0007314;product=term%3DCHCH-CHCH-like Cx9C%2C IMS import disulfide relay-system%2C%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16860 LTnewLM_9 Pfam protein_match 139196 139318 . + . Parent=LTnewLM_090009300.1:pep;Name=PF16860;signature_desc=CHCH-CHCH-like Cx9C%2C IMS import disulfide relay-system%2C ### LTnewLM_9 Liftoff gene 140436 141326 . + . ID=LTnewLM_090009400;coverage=1.0;sequence_ID=0.937;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.0370_0 LTnewLM_9 Liftoff mRNA 140436 141326 . + . ID=LTnewLM_090009400.1;Parent=LTnewLM_090009400;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 140436 141326 . + 0 ID=LTnewLM_090009400.1:CDS:1;Parent=LTnewLM_090009400.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 140436 141326 . + . ID=LTnewLM_090009400.1:pep;Derives_from=LTnewLM_090009400.1;orthologous_to=LmjF.09.0370_mRNA;ortholog_cluster=OG0007315;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 141997 143385 1 + . ID=LTnewLM_090009500 LTnewLM_9 AUGUSTUS mRNA 141997 143385 1 + . ID=LTnewLM_090009500.1;Parent=LTnewLM_090009500 LTnewLM_9 AUGUSTUS CDS 141997 143385 1 + 0 ID=LTnewLM_090009500.1:CDS:1;Parent=LTnewLM_090009500.1 ### LTnewLM_9 . polypeptide 141997 143385 . + . ID=LTnewLM_090009500.1:pep;Derives_from=LTnewLM_090009500.1;orthologous_to=LmjF.09.0380_mRNA;ortholog_cluster=OG0007316;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 145331 151224 . + . ID=LTnewLM_090009600:pseudogene;coverage=0.992;sequence_ID=0.935;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0390_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 145331 151224 . + . ID=LTnewLM_090009600.1;Parent=LTnewLM_090009600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 145331 151224 . + . ID=LTnewLM_090009600.1:pseudogenic_exon:1;Parent=LTnewLM_090009600.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 145331 151224 . + . ID=LTnewLM_090009600.1:pep;Derives_from=LTnewLM_090009600.1;orthologous_to=LmjF.09.0390_mRNA;ortholog_cluster=OG0007733;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 152369 153778 1 + . ID=LTnewLM_090009700 LTnewLM_9 AUGUSTUS mRNA 152369 153778 1 + . ID=LTnewLM_090009700.1;Parent=LTnewLM_090009700 LTnewLM_9 AUGUSTUS CDS 152369 153778 1 + 0 ID=LTnewLM_090009700.1:CDS:1;Parent=LTnewLM_090009700.1 ### LTnewLM_9 . polypeptide 152369 153778 . + . ID=LTnewLM_090009700.1:pep;Derives_from=LTnewLM_090009700.1;orthologous_to=LTnewLM_090009800.1,LmjF.09.0400_mRNA,LmjF.09.0410_mRNA;ortholog_cluster=OG0000279;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_9 Pfam protein_match 152768 153694 . + . Parent=LTnewLM_090009700.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_9 Pfam protein_match 152771 153448 . + . Parent=LTnewLM_090009700.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_9 AUGUSTUS gene 156482 157909 1 + . ID=LTnewLM_090009800 LTnewLM_9 AUGUSTUS mRNA 156482 157909 1 + . ID=LTnewLM_090009800.1;Parent=LTnewLM_090009800 LTnewLM_9 AUGUSTUS CDS 156482 157909 1 + 0 ID=LTnewLM_090009800.1:CDS:1;Parent=LTnewLM_090009800.1 ### LTnewLM_9 . polypeptide 156482 157909 . + . ID=LTnewLM_090009800.1:pep;Derives_from=LTnewLM_090009800.1;orthologous_to=LTnewLM_090009700.1,LmjF.09.0400_mRNA,LmjF.09.0410_mRNA;ortholog_cluster=OG0000279;product=term%3DProtein kinase domain/Protein tyrosine and serine/threonine kinase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00069|Pfam:PF07714;Ontology_term=GO:0004672,GO:0006468,GO:0005524 LTnewLM_9 Pfam protein_match 156899 157825 . + . Parent=LTnewLM_090009800.1:pep;Name=PF00069;signature_desc=Protein kinase domain;Ontology_term=GO:0004672,GO:0005524,GO:0006468 LTnewLM_9 Pfam protein_match 156902 157579 . + . Parent=LTnewLM_090009800.1:pep;Name=PF07714;signature_desc=Protein tyrosine and serine/threonine kinase;Ontology_term=GO:0004672,GO:0006468 ### LTnewLM_9 AUGUSTUS gene 159794 163045 1 + . ID=LTnewLM_090009900 LTnewLM_9 AUGUSTUS mRNA 159794 163045 1 + . ID=LTnewLM_090009900.1;Parent=LTnewLM_090009900 LTnewLM_9 AUGUSTUS CDS 159794 163045 1 + 0 ID=LTnewLM_090009900.1:CDS:1;Parent=LTnewLM_090009900.1 ### LTnewLM_9 . polypeptide 159794 163045 . + . ID=LTnewLM_090009900.1:pep;Derives_from=LTnewLM_090009900.1;orthologous_to=LmjF.09.0420_mRNA;ortholog_cluster=OG0007317;product=term%3DDual specificity protein phosphatase%2C N-terminal half%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14671 LTnewLM_9 Pfam protein_match 160517 160732 . + . Parent=LTnewLM_090009900.1:pep;Name=PF14671;signature_desc=Dual specificity protein phosphatase%2C N-terminal half ### LTnewLM_9 AUGUSTUS gene 165180 166583 1 + . ID=LTnewLM_090010000 LTnewLM_9 AUGUSTUS mRNA 165180 166583 1 + . ID=LTnewLM_090010000.1;Parent=LTnewLM_090010000 LTnewLM_9 AUGUSTUS CDS 165180 166583 1 + 0 ID=LTnewLM_090010000.1:CDS:1;Parent=LTnewLM_090010000.1 ### LTnewLM_9 . polypeptide 165180 166583 . + . ID=LTnewLM_090010000.1:pep;Derives_from=LTnewLM_090010000.1;orthologous_to=LmjF.09.0430_mRNA;ortholog_cluster=OG0007318;product=term%3DPlus-3 domain/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03126|Pfam:PF13920;Ontology_term=GO:0005634,GO:0016570,GO:0006352,GO:0003677 LTnewLM_9 Pfam protein_match 165219 165536 . + . Parent=LTnewLM_090010000.1:pep;Name=PF03126;signature_desc=Plus-3 domain;Ontology_term=GO:0003677,GO:0006352,GO:0016570,GO:0005634 LTnewLM_9 Pfam protein_match 166428 166556 . + . Parent=LTnewLM_090010000.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_9 AUGUSTUS gene 168254 170161 1 + . ID=LTnewLM_090010100 LTnewLM_9 AUGUSTUS mRNA 168254 170161 1 + . ID=LTnewLM_090010100.1;Parent=LTnewLM_090010100 LTnewLM_9 AUGUSTUS CDS 168254 170161 1 + 0 ID=LTnewLM_090010100.1:CDS:1;Parent=LTnewLM_090010100.1 ### LTnewLM_9 . polypeptide 168254 170161 . + . ID=LTnewLM_090010100.1:pep;Derives_from=LTnewLM_090010100.1;orthologous_to=LmjF.09.0440_mRNA;ortholog_cluster=OG0007319;product=term%3DTetratricopeptide repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13181;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 169394 169477 . + . Parent=LTnewLM_090010100.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 169802 169891 . + . Parent=LTnewLM_090010100.1:pep;Name=PF13181;signature_desc=Tetratricopeptide repeat;Ontology_term=GO:0005515 ### LTnewLM_9 AUGUSTUS gene 171088 174174 1 + . ID=LTnewLM_090010200 LTnewLM_9 AUGUSTUS mRNA 171088 174174 1 + . ID=LTnewLM_090010200.1;Parent=LTnewLM_090010200 LTnewLM_9 AUGUSTUS CDS 171088 174174 1 + 0 ID=LTnewLM_090010200.1:CDS:1;Parent=LTnewLM_090010200.1 ### LTnewLM_9 . polypeptide 171088 174174 . + . ID=LTnewLM_090010200.1:pep;Derives_from=LTnewLM_090010200.1;orthologous_to=LmjF.09.0450_mRNA;ortholog_cluster=OG0007320;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 175203 184312 1.51e+04 + . ID=LTnewLM_090010300:pseudogene;has_internal_stop=false;has_frameshift=true;has_start=true;Target=LmjF.09.0460:mRNA 1 3056;original_prot_length=3057 LTnewLM_9 . pseudogenic_transcript 175203 184312 . + . ID=LTnewLM_090010300.1;Parent=LTnewLM_090010300:pseudogene LTnewLM_9 . pseudogenic_exon 175203 183872 . + . ID=LTnewLM_090010300.1:pseudogenic_exon:1;Parent=LTnewLM_090010300.1 LTnewLM_9 . pseudogenic_exon 183875 184312 . + . ID=LTnewLM_090010300.1:pseudogenic_exon:2;Parent=LTnewLM_090010300.1 ### LTnewLM_9 . polypeptide 175203 184312 . + . ID=LTnewLM_090010300.1:pep;Derives_from=LTnewLM_090010300.1;orthologous_to=LmjF.09.0460_mRNA;ortholog_cluster=OG0007734;product=term%3DC-terminal region of Mon2 protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16206 LTnewLM_9 Pfam protein_match 181365 181793 . + . Parent=LTnewLM_090010300.1:pep;Name=PF16206;signature_desc=C-terminal region of Mon2 protein ### LTnewLM_9 AUGUSTUS gene 185362 187320 1 + . ID=LTnewLM_090010400 LTnewLM_9 AUGUSTUS mRNA 185362 187320 1 + . ID=LTnewLM_090010400.1;Parent=LTnewLM_090010400 LTnewLM_9 AUGUSTUS CDS 185362 187320 1 + 0 ID=LTnewLM_090010400.1:CDS:1;Parent=LTnewLM_090010400.1 ### LTnewLM_9 . polypeptide 185362 187320 . + . ID=LTnewLM_090010400.1:pep;Derives_from=LTnewLM_090010400.1;orthologous_to=LmjF.09.0470_mRNA;ortholog_cluster=OG0007321;product=term%3DCalcineurin-like phosphoesterase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00149;Ontology_term=GO:0016787 LTnewLM_9 Pfam protein_match 186436 187119 . + . Parent=LTnewLM_090010400.1:pep;Name=PF00149;signature_desc=Calcineurin-like phosphoesterase;Ontology_term=GO:0016787 ### LTnewLM_9 AUGUSTUS gene 189917 192151 1 + . ID=LTnewLM_090010500 LTnewLM_9 AUGUSTUS mRNA 189917 192151 1 + . ID=LTnewLM_090010500.1;Parent=LTnewLM_090010500 LTnewLM_9 AUGUSTUS CDS 189917 192151 1 + 0 ID=LTnewLM_090010500.1:CDS:1;Parent=LTnewLM_090010500.1 ### LTnewLM_9 . polypeptide 189917 192151 . + . ID=LTnewLM_090010500.1:pep;Derives_from=LTnewLM_090010500.1;orthologous_to=LmjF.09.0480_mRNA;ortholog_cluster=OG0007322;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 193069 194304 1 + . ID=LTnewLM_090010600 LTnewLM_9 AUGUSTUS mRNA 193069 194304 1 + . ID=LTnewLM_090010600.1;Parent=LTnewLM_090010600 LTnewLM_9 AUGUSTUS CDS 193069 194304 1 + 0 ID=LTnewLM_090010600.1:CDS:1;Parent=LTnewLM_090010600.1 ### LTnewLM_9 . polypeptide 193069 194304 . + . ID=LTnewLM_090010600.1:pep;Derives_from=LTnewLM_090010600.1;orthologous_to=LmjF.09.0490_mRNA;ortholog_cluster=OG0007323;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 Liftoff gene 195056 200038 . + . ID=LTnewLM_090010700;coverage=0.986;sequence_ID=0.932;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.0500_0 LTnewLM_9 Liftoff mRNA 195056 200038 . + . ID=LTnewLM_090010700.1;Parent=LTnewLM_090010700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 195056 200038 . + 0 ID=LTnewLM_090010700.1:CDS:1;Parent=LTnewLM_090010700.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 195056 200038 . + . ID=LTnewLM_090010700.1:pep;Derives_from=LTnewLM_090010700.1;orthologous_to=LmjF.09.0500_mRNA;ortholog_cluster=OG0007324;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 200860 202107 1 + . ID=LTnewLM_090010800 LTnewLM_9 AUGUSTUS mRNA 200860 202107 1 + . ID=LTnewLM_090010800.1;Parent=LTnewLM_090010800 LTnewLM_9 AUGUSTUS CDS 200860 202107 1 + 0 ID=LTnewLM_090010800.1:CDS:1;Parent=LTnewLM_090010800.1 ### LTnewLM_9 . polypeptide 200860 202107 . + . ID=LTnewLM_090010800.1:pep;Derives_from=LTnewLM_090010800.1;orthologous_to=LmjF.09.0510_mRNA;ortholog_cluster=OG0007325;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 203018 205330 1 + . ID=LTnewLM_090010900 LTnewLM_9 AUGUSTUS mRNA 203018 205330 1 + . ID=LTnewLM_090010900.1;Parent=LTnewLM_090010900 LTnewLM_9 AUGUSTUS CDS 203018 205330 1 + 0 ID=LTnewLM_090010900.1:CDS:1;Parent=LTnewLM_090010900.1 ### LTnewLM_9 . polypeptide 203018 205330 . + . ID=LTnewLM_090010900.1:pep;Derives_from=LTnewLM_090010900.1;orthologous_to=LmjF.09.0520_mRNA;ortholog_cluster=OG0007326;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 208915 211908 1 + . ID=LTnewLM_090011000 LTnewLM_9 AUGUSTUS mRNA 208915 211908 1 + . ID=LTnewLM_090011000.1;Parent=LTnewLM_090011000 LTnewLM_9 AUGUSTUS CDS 208915 211908 1 + 0 ID=LTnewLM_090011000.1:CDS:1;Parent=LTnewLM_090011000.1 ### LTnewLM_9 . polypeptide 208915 211908 . + . ID=LTnewLM_090011000.1:pep;Derives_from=LTnewLM_090011000.1;orthologous_to=LmjF.09.0530_mRNA;ortholog_cluster=OG0007327;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 213989 217545 . + . ID=LTnewLM_090011100:pseudogene;coverage=0.982;sequence_ID=0.915;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0540_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 213989 217545 . + . ID=LTnewLM_090011100.1;Parent=LTnewLM_090011100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 213989 217545 . + . ID=LTnewLM_090011100.1:pseudogenic_exon:1;Parent=LTnewLM_090011100.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 213989 217545 . + . ID=LTnewLM_090011100.1:pep;Derives_from=LTnewLM_090011100.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 219453 221228 1 + . ID=LTnewLM_090011200 LTnewLM_9 AUGUSTUS mRNA 219453 221228 1 + . ID=LTnewLM_090011200.1;Parent=LTnewLM_090011200 LTnewLM_9 AUGUSTUS CDS 219453 221228 1 + 0 ID=LTnewLM_090011200.1:CDS:1;Parent=LTnewLM_090011200.1 ### LTnewLM_9 . polypeptide 219453 221228 . + . ID=LTnewLM_090011200.1:pep;Derives_from=LTnewLM_090011200.1;orthologous_to=LmjF.09.0550_mRNA;ortholog_cluster=OG0007328;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 222244 223032 1 + . ID=LTnewLM_090011300 LTnewLM_9 AUGUSTUS mRNA 222244 223032 1 + . ID=LTnewLM_090011300.1;Parent=LTnewLM_090011300 LTnewLM_9 AUGUSTUS CDS 222244 223032 1 + 0 ID=LTnewLM_090011300.1:CDS:1;Parent=LTnewLM_090011300.1 ### LTnewLM_9 . polypeptide 222244 223032 . + . ID=LTnewLM_090011300.1:pep;Derives_from=LTnewLM_090011300.1;orthologous_to=LmjF.09.0560_mRNA;ortholog_cluster=OG0007329;product=term%3DHistidine phosphatase superfamily (branch 1)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00300 LTnewLM_9 Pfam protein_match 222259 222477 . + . Parent=LTnewLM_090011300.1:pep;Name=PF00300;signature_desc=Histidine phosphatase superfamily (branch 1) ### LTnewLM_9 AUGUSTUS gene 223905 225374 1 + . ID=LTnewLM_090011400 LTnewLM_9 AUGUSTUS mRNA 223905 225374 1 + . ID=LTnewLM_090011400.1;Parent=LTnewLM_090011400 LTnewLM_9 AUGUSTUS CDS 223905 225374 1 + 0 ID=LTnewLM_090011400.1:CDS:1;Parent=LTnewLM_090011400.1 ### LTnewLM_9 . polypeptide 223905 225374 . + . ID=LTnewLM_090011400.1:pep;Derives_from=LTnewLM_090011400.1;orthologous_to=LmjF.09.0570_mRNA;ortholog_cluster=OG0007330;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 228606 229463 1 + . ID=LTnewLM_090011500 LTnewLM_9 AUGUSTUS mRNA 228606 229463 1 + . ID=LTnewLM_090011500.1;Parent=LTnewLM_090011500 LTnewLM_9 AUGUSTUS CDS 228606 229463 1 + 0 ID=LTnewLM_090011500.1:CDS:1;Parent=LTnewLM_090011500.1 ### LTnewLM_9 . polypeptide 228606 229463 . + . ID=LTnewLM_090011500.1:pep;Derives_from=LTnewLM_090011500.1;orthologous_to=LmjF.09.0580_mRNA;ortholog_cluster=OG0007331;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . polypeptide 231451 233336 . + . ID=LTnewLM_090011600.1:pep;Derives_from=LTnewLM_090011600.1;orthologous_to=LTnewLM_090011600.2,LmjF.09.0590_mRNA;ortholog_cluster=OG0000506;product=term%3DUvrD/REP helicase N-terminal domain/AAA domain/UvrD-like helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00580|Pfam:PF13245|Pfam:PF13361;Ontology_term=GO:0016787,GO:0005524 LTnewLM_9 Pfam protein_match 231967 232293 . + . Parent=LTnewLM_090011600.1:pep;Name=PF00580;signature_desc=UvrD/REP helicase N-terminal domain;Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 231976 232803 . + . Parent=LTnewLM_090011600.1:pep;Name=PF13245;signature_desc=AAA domain LTnewLM_9 Pfam protein_match 232363 232851 . + . Parent=LTnewLM_090011600.1:pep;Name=PF00580;signature_desc=UvrD/REP helicase N-terminal domain;Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 232873 233166 . + . Parent=LTnewLM_090011600.1:pep;Name=PF13361;signature_desc=UvrD-like helicase C-terminal domain;Ontology_term=GO:0005524,GO:0016787 ### LTnewLM_9 AUGUSTUS gene 231451 234948 1.49 + . ID=LTnewLM_090011600 LTnewLM_9 AUGUSTUS mRNA 231451 233336 0.49 + . ID=LTnewLM_090011600.1;Parent=LTnewLM_090011600 LTnewLM_9 AUGUSTUS CDS 231451 233171 0.49 + 0 ID=LTnewLM_090011600.1:CDS:1;Parent=LTnewLM_090011600.1 LTnewLM_9 AUGUSTUS CDS 233270 233336 0.55 + 1 ID=LTnewLM_090011600.1:CDS:2;Parent=LTnewLM_090011600.1 LTnewLM_9 AUGUSTUS mRNA 231451 234948 1 + . ID=LTnewLM_090011600.2;Parent=LTnewLM_090011600 LTnewLM_9 AUGUSTUS CDS 231451 234948 1 + 0 ID=LTnewLM_090011600.2:CDS:1;Parent=LTnewLM_090011600.2 ### LTnewLM_9 . polypeptide 231451 234948 . + . ID=LTnewLM_090011600.2:pep;Derives_from=LTnewLM_090011600.2;orthologous_to=LTnewLM_090011600.1,LmjF.09.0590_mRNA;ortholog_cluster=OG0000506;product=term%3DUvrD/REP helicase N-terminal domain/AAA domain/UvrD-like helicase C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00580|Pfam:PF13245|Pfam:PF13361|Pfam:PF13538;Ontology_term=GO:0016787,GO:0005524 LTnewLM_9 Pfam protein_match 231967 232851 . + . Parent=LTnewLM_090011600.2:pep;Name=PF00580;signature_desc=UvrD/REP helicase N-terminal domain;Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 231976 232803 . + . Parent=LTnewLM_090011600.2:pep;Name=PF13245;signature_desc=AAA domain LTnewLM_9 Pfam protein_match 232873 233235 . + . Parent=LTnewLM_090011600.2:pep;Name=PF13361;signature_desc=UvrD-like helicase C-terminal domain;Ontology_term=GO:0005524,GO:0016787 LTnewLM_9 Pfam protein_match 234586 234741 . + . Parent=LTnewLM_090011600.2:pep;Name=PF13361;signature_desc=UvrD-like helicase C-terminal domain;Ontology_term=GO:0005524,GO:0016787 LTnewLM_9 Pfam protein_match 234592 234741 . + . Parent=LTnewLM_090011600.2:pep;Name=PF13538;signature_desc=UvrD-like helicase C-terminal domain ### LTnewLM_9 AUGUSTUS gene 235921 236928 1 + . ID=LTnewLM_090011700 LTnewLM_9 AUGUSTUS mRNA 235921 236928 1 + . ID=LTnewLM_090011700.1;Parent=LTnewLM_090011700 LTnewLM_9 AUGUSTUS CDS 235921 236928 1 + 0 ID=LTnewLM_090011700.1:CDS:1;Parent=LTnewLM_090011700.1 ### LTnewLM_9 . polypeptide 235921 236928 . + . ID=LTnewLM_090011700.1:pep;Derives_from=LTnewLM_090011700.1;orthologous_to=LmjF.09.0600_mRNA;ortholog_cluster=OG0007332;product=term%3DPeptidase family S51%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03575;Ontology_term=GO:0006508,GO:0008236 LTnewLM_9 Pfam protein_match 235996 236670 . + . Parent=LTnewLM_090011700.1:pep;Name=PF03575;signature_desc=Peptidase family S51;Ontology_term=GO:0008236,GO:0006508 ### LTnewLM_9 AUGUSTUS gene 237718 240630 1 + . ID=LTnewLM_090011800 LTnewLM_9 AUGUSTUS mRNA 237718 240630 1 + . ID=LTnewLM_090011800.1;Parent=LTnewLM_090011800 LTnewLM_9 AUGUSTUS CDS 237718 240630 1 + 0 ID=LTnewLM_090011800.1:CDS:1;Parent=LTnewLM_090011800.1 ### LTnewLM_9 . polypeptide 237718 240630 . + . ID=LTnewLM_090011800.1:pep;Derives_from=LTnewLM_090011800.1;orthologous_to=LmjF.09.0610_mRNA;ortholog_cluster=OG0007333;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 Liftoff gene 241685 243943 . + . ID=LTnewLM_090011900;coverage=0.997;sequence_ID=0.950;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.0620_0 LTnewLM_9 Liftoff mRNA 241685 243943 . + . ID=LTnewLM_090011900.1;Parent=LTnewLM_090011900;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 241685 243943 . + 0 ID=LTnewLM_090011900.1:CDS:1;Parent=LTnewLM_090011900.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 241685 243943 . + . ID=LTnewLM_090011900.1:pep;Derives_from=LTnewLM_090011900.1;orthologous_to=LmjF.09.0620_mRNA;ortholog_cluster=OG0007334;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 245399 248875 1 + . ID=LTnewLM_090012000 LTnewLM_9 AUGUSTUS mRNA 245399 248875 1 + . ID=LTnewLM_090012000.1;Parent=LTnewLM_090012000 LTnewLM_9 AUGUSTUS CDS 245399 248875 1 + 0 ID=LTnewLM_090012000.1:CDS:1;Parent=LTnewLM_090012000.1 ### LTnewLM_9 . polypeptide 245399 248875 . + . ID=LTnewLM_090012000.1:pep;Derives_from=LTnewLM_090012000.1;orthologous_to=LmjF.09.0630_mRNA;ortholog_cluster=OG0007335;product=term%3DPH domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00169 LTnewLM_9 Pfam protein_match 246980 247252 . + . Parent=LTnewLM_090012000.1:pep;Name=PF00169;signature_desc=PH domain ### LTnewLM_9 AUGUSTUS gene 249937 251439 1 + . ID=LTnewLM_090012100 LTnewLM_9 AUGUSTUS mRNA 249937 251439 1 + . ID=LTnewLM_090012100.1;Parent=LTnewLM_090012100 LTnewLM_9 AUGUSTUS CDS 249937 251439 1 + 0 ID=LTnewLM_090012100.1:CDS:1;Parent=LTnewLM_090012100.1 ### LTnewLM_9 . polypeptide 249937 251439 . + . ID=LTnewLM_090012100.1:pep;Derives_from=LTnewLM_090012100.1;orthologous_to=LmjF.09.0640_mRNA;ortholog_cluster=OG0007336;product=term%3DDHHC palmitoyltransferase%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01529;Ontology_term=GO:0008270 LTnewLM_9 Pfam protein_match 250669 251088 . + . Parent=LTnewLM_090012100.1:pep;Name=PF01529;signature_desc=DHHC palmitoyltransferase;Ontology_term=GO:0008270 ### LTnewLM_9 AUGUSTUS gene 252436 254349 1 + . ID=LTnewLM_090012200 LTnewLM_9 AUGUSTUS mRNA 252436 254349 1 + . ID=LTnewLM_090012200.1;Parent=LTnewLM_090012200 LTnewLM_9 AUGUSTUS CDS 252436 254349 1 + 0 ID=LTnewLM_090012200.1:CDS:1;Parent=LTnewLM_090012200.1 ### LTnewLM_9 . polypeptide 252436 254349 . + . ID=LTnewLM_090012200.1:pep;Derives_from=LTnewLM_090012200.1;orthologous_to=LmjF.09.0650_mRNA;ortholog_cluster=OG0007337;product=term%3DZeta toxin%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF06414;Ontology_term=GO:0016301,GO:0005524 LTnewLM_9 Pfam protein_match 253060 253182 . + . Parent=LTnewLM_090012200.1:pep;Name=PF06414;signature_desc=Zeta toxin;Ontology_term=GO:0005524,GO:0016301 ### LTnewLM_9 AUGUSTUS gene 255002 256060 1 + . ID=LTnewLM_090012300 LTnewLM_9 AUGUSTUS mRNA 255002 256060 1 + . ID=LTnewLM_090012300.1;Parent=LTnewLM_090012300 LTnewLM_9 AUGUSTUS CDS 255002 256060 1 + 0 ID=LTnewLM_090012300.1:CDS:1;Parent=LTnewLM_090012300.1 ### LTnewLM_9 . polypeptide 255002 256060 . + . ID=LTnewLM_090012300.1:pep;Derives_from=LTnewLM_090012300.1;orthologous_to=LmjF.09.0660_mRNA;ortholog_cluster=OG0007338;product=term%3DMethyltransferase TYW3%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02676 LTnewLM_9 Pfam protein_match 255200 256033 . + . Parent=LTnewLM_090012300.1:pep;Name=PF02676;signature_desc=Methyltransferase TYW3 ### LTnewLM_9 AUGUSTUS gene 256742 257158 1 + . ID=LTnewLM_090012400 LTnewLM_9 AUGUSTUS mRNA 256742 257158 1 + . ID=LTnewLM_090012400.1;Parent=LTnewLM_090012400 LTnewLM_9 AUGUSTUS CDS 256742 257158 1 + 0 ID=LTnewLM_090012400.1:CDS:1;Parent=LTnewLM_090012400.1 ### LTnewLM_9 . polypeptide 256742 257158 . + . ID=LTnewLM_090012400.1:pep;Derives_from=LTnewLM_090012400.1;orthologous_to=LmjF.09.0670_mRNA;ortholog_cluster=OG0007339;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF01920;Ontology_term=GO:0051082,GO:0006457,GO:0016272 LTnewLM_9 Pfam protein_match 256787 257077 . + . Parent=LTnewLM_090012400.1:pep;Name=PF01920;signature_desc=Prefoldin subunit;Ontology_term=GO:0051082,GO:0006457,GO:0016272 ### LTnewLM_9 AUGUSTUS gene 257694 258806 1 + . ID=LTnewLM_090012500 LTnewLM_9 AUGUSTUS mRNA 257694 258806 1 + . ID=LTnewLM_090012500.1;Parent=LTnewLM_090012500 LTnewLM_9 AUGUSTUS CDS 257694 258806 1 + 0 ID=LTnewLM_090012500.1:CDS:1;Parent=LTnewLM_090012500.1 ### LTnewLM_9 . polypeptide 257694 258806 . + . ID=LTnewLM_090012500.1:pep;Derives_from=LTnewLM_090012500.1;orthologous_to=LmjF.09.0680_mRNA;ortholog_cluster=OG0007340;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 259099 260019 1 + . ID=LTnewLM_090012600 LTnewLM_9 AUGUSTUS mRNA 259099 260019 1 + . ID=LTnewLM_090012600.1;Parent=LTnewLM_090012600 LTnewLM_9 AUGUSTUS CDS 259099 260019 1 + 0 ID=LTnewLM_090012600.1:CDS:1;Parent=LTnewLM_090012600.1 ### LTnewLM_9 . polypeptide 259099 260019 . + . ID=LTnewLM_090012600.1:pep;Derives_from=LTnewLM_090012600.1;orthologous_to=LmjF.09.0690_mRNA;ortholog_cluster=OG0007341;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 GenomeTools gene 265339 265457 93.1 - . ID=LTnewLM_090012700 LTnewLM_9 INFERNAL rRNA 265339 265457 93.1 - . ID=LTnewLM_090012700:rRNA;Parent=LTnewLM_090012700;gc=0.50;evalue=8.1e-21;score=93.1;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_9 Liftoff gene 265340 265458 . - . ID=LTnewLM_090012800;coverage=1.0;sequence_ID=0.983;extra_copy_number=0;copy_num_ID=LmjF.09.5SrRNA.02_0 LTnewLM_9 Liftoff rRNA 265340 265458 . - . ID=LTnewLM_090012800:rRNA;Parent=LTnewLM_090012800;extra_copy_number=0 ### LTnewLM_9 Aragorn_1.2.36 gene 265532 265603 . + . ID=LTnewLM_090012900 LTnewLM_9 Aragorn_1.2.36 tRNA 265532 265603 . + . ID=LTnewLM_090012900:tRNA;Parent=LTnewLM_090012900;aa=Met;anticodon=cat;gc_content=55.6 ### LTnewLM_9 Aragorn_1.2.36 gene 265662 265745 . + . ID=LTnewLM_090013000 LTnewLM_9 Aragorn_1.2.36 tRNA 265662 265745 . + . ID=LTnewLM_090013000:tRNA;Parent=LTnewLM_090013000;aa=Leu;anticodon=cag;gc_content=57.1 ### LTnewLM_9 AUGUSTUS gene 266826 268373 1 - . ID=LTnewLM_090013100 LTnewLM_9 AUGUSTUS mRNA 266826 268373 1 - . ID=LTnewLM_090013100.1;Parent=LTnewLM_090013100 LTnewLM_9 AUGUSTUS CDS 266826 268373 1 - 0 ID=LTnewLM_090013100.1:CDS:1;Parent=LTnewLM_090013100.1 ### LTnewLM_9 . polypeptide 266826 268373 . - . ID=LTnewLM_090013100.1:pep;Derives_from=LTnewLM_090013100.1;orthologous_to=LmjF.09.0700_mRNA;ortholog_cluster=OG0007342;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 269834 271435 1 - . ID=LTnewLM_090013200 LTnewLM_9 AUGUSTUS mRNA 269834 271435 1 - . ID=LTnewLM_090013200.1;Parent=LTnewLM_090013200 LTnewLM_9 AUGUSTUS CDS 269834 271435 1 - 0 ID=LTnewLM_090013200.1:CDS:1;Parent=LTnewLM_090013200.1 ### LTnewLM_9 . polypeptide 269834 271435 . - . ID=LTnewLM_090013200.1:pep;Derives_from=LTnewLM_090013200.1;orthologous_to=LmjF.09.0710_mRNA;ortholog_cluster=OG0007343;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 272899 273909 1 - . ID=LTnewLM_090013300 LTnewLM_9 AUGUSTUS mRNA 272899 273909 1 - . ID=LTnewLM_090013300.1;Parent=LTnewLM_090013300 LTnewLM_9 AUGUSTUS CDS 272899 273909 1 - 0 ID=LTnewLM_090013300.1:CDS:1;Parent=LTnewLM_090013300.1 ### LTnewLM_9 . polypeptide 272899 273909 . - . ID=LTnewLM_090013300.1:pep;Derives_from=LTnewLM_090013300.1;orthologous_to=LmjF.09.0720_mRNA;ortholog_cluster=OG0007344;product=term%3DRNA-binding%2C Nab2-type zinc finger/CCCH-type zinc finger/Zinc finger domain/Zinc knuckle%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14608|Pfam:PF18044|Pfam:PF18345|Pfam:PF00098;Ontology_term=GO:0003676,GO:0008270 LTnewLM_9 Pfam protein_match 273115 273159 . - . Parent=LTnewLM_090013300.1:pep;Name=PF00098;signature_desc=Zinc knuckle;Ontology_term=GO:0003676,GO:0008270 LTnewLM_9 Pfam protein_match 273427 273486 . - . Parent=LTnewLM_090013300.1:pep;Name=PF14608;signature_desc=RNA-binding%2C Nab2-type zinc finger LTnewLM_9 Pfam protein_match 273589 273645 . - . Parent=LTnewLM_090013300.1:pep;Name=PF14608;signature_desc=RNA-binding%2C Nab2-type zinc finger LTnewLM_9 Pfam protein_match 273673 273726 . - . Parent=LTnewLM_090013300.1:pep;Name=PF18345;signature_desc=Zinc finger domain LTnewLM_9 Pfam protein_match 273673 273726 . - . Parent=LTnewLM_090013300.1:pep;Name=PF14608;signature_desc=RNA-binding%2C Nab2-type zinc finger LTnewLM_9 Pfam protein_match 273673 273732 . - . Parent=LTnewLM_090013300.1:pep;Name=PF18044;signature_desc=CCCH-type zinc finger LTnewLM_9 Pfam protein_match 273766 273822 . - . Parent=LTnewLM_090013300.1:pep;Name=PF14608;signature_desc=RNA-binding%2C Nab2-type zinc finger ### LTnewLM_9 . pseudogene 274564 276462 . - . ID=LTnewLM_090013400:pseudogene;coverage=0.998;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0730_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 274564 276462 . - . ID=LTnewLM_090013400.1;Parent=LTnewLM_090013400:pseudogene;matches_ref_protein=False;valid_ORF=False;inframe_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 274564 276462 . - . ID=LTnewLM_090013400.1:pseudogenic_exon:1;Parent=LTnewLM_090013400.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 274564 276462 . - . ID=LTnewLM_090013400.1:pep;Derives_from=LTnewLM_090013400.1;orthologous_to=LmjF.09.0730_mRNA;ortholog_cluster=OG0007735;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 277221 283908 0.61 - . ID=LTnewLM_090013500 LTnewLM_9 AUGUSTUS mRNA 277221 283908 0.61 - . ID=LTnewLM_090013500.1;Parent=LTnewLM_090013500 LTnewLM_9 AUGUSTUS CDS 277221 281027 0.61 - 0 ID=LTnewLM_090013500.1:CDS:1;Parent=LTnewLM_090013500.1 LTnewLM_9 AUGUSTUS CDS 281086 283908 1 - 0 ID=LTnewLM_090013500.1:CDS:2;Parent=LTnewLM_090013500.1 ### LTnewLM_9 . polypeptide 277221 283908 . - . ID=LTnewLM_090013500.1:pep;Derives_from=LTnewLM_090013500.1;orthologous_to=LmjF.09.0740_mRNA;ortholog_cluster=OG0007345;product=term%3DPutative zinc finger in N-recognin (UBR box)/Proteolysis_6 C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02207|Pfam:PF18995;Ontology_term=GO:0008270 LTnewLM_9 Pfam protein_match 277354 277728 . - . Parent=LTnewLM_090013500.1:pep;Name=PF18995;signature_desc=Proteolysis_6 C-terminal LTnewLM_9 Pfam protein_match 283237 283437 . - . Parent=LTnewLM_090013500.1:pep;Name=PF02207;signature_desc=Putative zinc finger in N-recognin (UBR box);Ontology_term=GO:0008270 ### LTnewLM_9 AUGUSTUS gene 285559 288555 1 - . ID=LTnewLM_090013600 LTnewLM_9 AUGUSTUS mRNA 285559 288555 1 - . ID=LTnewLM_090013600.1;Parent=LTnewLM_090013600 LTnewLM_9 AUGUSTUS CDS 285559 288555 1 - 0 ID=LTnewLM_090013600.1:CDS:1;Parent=LTnewLM_090013600.1 ### LTnewLM_9 . polypeptide 285559 288555 . - . ID=LTnewLM_090013600.1:pep;Derives_from=LTnewLM_090013600.1;orthologous_to=LmjF.09.0750_mRNA;ortholog_cluster=OG0007346;product=term%3DAcyl CoA binding protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00887;Ontology_term=GO:0000062 LTnewLM_9 Pfam protein_match 285604 285819 . - . Parent=LTnewLM_090013600.1:pep;Name=PF00887;signature_desc=Acyl CoA binding protein;Ontology_term=GO:0000062 ### LTnewLM_9 . polypeptide 289612 291653 . - . ID=LTnewLM_090013700.1:pep;Derives_from=LTnewLM_090013700.1;orthologous_to=LTnewLM_090013700.2,LmjF.09.0760_mRNA;ortholog_cluster=OG0000507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 289612 305988 0.8 - . ID=LTnewLM_090013700 LTnewLM_9 AUGUSTUS mRNA 289612 291653 0.55 - . ID=LTnewLM_090013700.1;Parent=LTnewLM_090013700 LTnewLM_9 AUGUSTUS CDS 289612 291489 0.66 - 0 ID=LTnewLM_090013700.1:CDS:1;Parent=LTnewLM_090013700.1 LTnewLM_9 AUGUSTUS CDS 291546 291653 0.57 - 0 ID=LTnewLM_090013700.1:CDS:2;Parent=LTnewLM_090013700.1 LTnewLM_9 AUGUSTUS mRNA 289612 305988 0.25 - . ID=LTnewLM_090013700.2;Parent=LTnewLM_090013700 LTnewLM_9 AUGUSTUS CDS 289612 296755 0.25 - 1 ID=LTnewLM_090013700.2:CDS:1;Parent=LTnewLM_090013700.2 LTnewLM_9 AUGUSTUS CDS 296843 305988 0.26 - 0 ID=LTnewLM_090013700.2:CDS:2;Parent=LTnewLM_090013700.2 ### LTnewLM_9 . polypeptide 289612 305988 . - . ID=LTnewLM_090013700.2:pep;Derives_from=LTnewLM_090013700.2;orthologous_to=LTnewLM_090013700.1,LmjF.09.0760_mRNA;ortholog_cluster=OG0000507;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 307792 309987 1 - . ID=LTnewLM_090013800 LTnewLM_9 AUGUSTUS mRNA 307792 309987 1 - . ID=LTnewLM_090013800.1;Parent=LTnewLM_090013800 LTnewLM_9 AUGUSTUS CDS 307792 309987 1 - 0 ID=LTnewLM_090013800.1:CDS:1;Parent=LTnewLM_090013800.1 ### LTnewLM_9 . polypeptide 307792 309987 . - . ID=LTnewLM_090013800.1:pep;Derives_from=LTnewLM_090013800.1;orthologous_to=LmjF.09.0770_mRNA;ortholog_cluster=OG0007347;product=term%3DProlyl oligopeptidase%2C N-terminal beta-propeller domain/Prolyl oligopeptidase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02897|Pfam:PF00326;Ontology_term=GO:0006508,GO:0004252,GO:0070008,GO:0008236 LTnewLM_9 Pfam protein_match 307822 308472 . - . Parent=LTnewLM_090013800.1:pep;Name=PF00326;signature_desc=Prolyl oligopeptidase family;Ontology_term=GO:0008236,GO:0006508 LTnewLM_9 Pfam protein_match 308653 309903 . - . Parent=LTnewLM_090013800.1:pep;Name=PF02897;signature_desc=Prolyl oligopeptidase%2C N-terminal beta-propeller domain;Ontology_term=GO:0004252,GO:0070008 ### LTnewLM_9 AUGUSTUS gene 311367 312158 1 - . ID=LTnewLM_090013900 LTnewLM_9 AUGUSTUS mRNA 311367 312158 1 - . ID=LTnewLM_090013900.1;Parent=LTnewLM_090013900 LTnewLM_9 AUGUSTUS CDS 311367 312158 1 - 0 ID=LTnewLM_090013900.1:CDS:1;Parent=LTnewLM_090013900.1 ### LTnewLM_9 . polypeptide 311367 312158 . - . ID=LTnewLM_090013900.1:pep;Derives_from=LTnewLM_090013900.1;orthologous_to=LmjF.09.0780_mRNA;ortholog_cluster=OG0007348;product=term%3DDomain of unknown function (DUF4464)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF14713 LTnewLM_9 Pfam protein_match 311376 312032 . - . Parent=LTnewLM_090013900.1:pep;Name=PF14713;signature_desc=Domain of unknown function (DUF4464) ### LTnewLM_9 AUGUSTUS gene 312759 316502 1 - . ID=LTnewLM_090014000 LTnewLM_9 AUGUSTUS mRNA 312759 316502 1 - . ID=LTnewLM_090014000.1;Parent=LTnewLM_090014000 LTnewLM_9 AUGUSTUS CDS 312759 316502 1 - 0 ID=LTnewLM_090014000.1:CDS:1;Parent=LTnewLM_090014000.1 ### LTnewLM_9 . polypeptide 312759 316502 . - . ID=LTnewLM_090014000.1:pep;Derives_from=LTnewLM_090014000.1;orthologous_to=LmjF.09.0790_mRNA;ortholog_cluster=OG0007349;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . polypeptide 317343 321214 . - . ID=LTnewLM_090014100.1:pep;Derives_from=LTnewLM_090014100.1;orthologous_to=LTnewLM_090014100.2,LTnewLM_090014100.3,LmjF.09.0800_mRNA;ortholog_cluster=OG0000280;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 317343 321538 1.93 - . ID=LTnewLM_090014100 LTnewLM_9 AUGUSTUS mRNA 317343 321214 0.66 - . ID=LTnewLM_090014100.1;Parent=LTnewLM_090014100 LTnewLM_9 AUGUSTUS CDS 317343 320896 0.7 - 2 ID=LTnewLM_090014100.1:CDS:1;Parent=LTnewLM_090014100.1 LTnewLM_9 AUGUSTUS CDS 320998 321214 0.66 - 0 ID=LTnewLM_090014100.1:CDS:2;Parent=LTnewLM_090014100.1 LTnewLM_9 AUGUSTUS mRNA 317343 321538 0.67 - . ID=LTnewLM_090014100.2;Parent=LTnewLM_090014100 LTnewLM_9 AUGUSTUS CDS 317343 320896 0.67 - 2 ID=LTnewLM_090014100.2:CDS:1;Parent=LTnewLM_090014100.2 LTnewLM_9 AUGUSTUS CDS 320998 321538 0.67 - 0 ID=LTnewLM_090014100.2:CDS:2;Parent=LTnewLM_090014100.2 LTnewLM_9 AUGUSTUS mRNA 321255 321538 0.6 - . ID=LTnewLM_090014100.3;Parent=LTnewLM_090014100 LTnewLM_9 AUGUSTUS CDS 321255 321301 0.6 - 2 ID=LTnewLM_090014100.3:CDS:1;Parent=LTnewLM_090014100.3 LTnewLM_9 AUGUSTUS CDS 321382 321538 0.75 - 0 ID=LTnewLM_090014100.3:CDS:2;Parent=LTnewLM_090014100.3 ### LTnewLM_9 . polypeptide 317343 321538 . - . ID=LTnewLM_090014100.2:pep;Derives_from=LTnewLM_090014100.2;orthologous_to=LTnewLM_090014100.1,LTnewLM_090014100.3,LmjF.09.0800_mRNA;ortholog_cluster=OG0000280;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . polypeptide 321255 321538 . - . ID=LTnewLM_090014100.3:pep;Derives_from=LTnewLM_090014100.3;orthologous_to=LTnewLM_090014100.1,LTnewLM_090014100.2,LmjF.09.0800_mRNA;ortholog_cluster=OG0000280;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 322618 323262 1 - . ID=LTnewLM_090014200 LTnewLM_9 AUGUSTUS mRNA 322618 323262 1 - . ID=LTnewLM_090014200.1;Parent=LTnewLM_090014200 LTnewLM_9 AUGUSTUS CDS 322618 323262 1 - 0 ID=LTnewLM_090014200.1:CDS:1;Parent=LTnewLM_090014200.1 ### LTnewLM_9 . polypeptide 322618 323262 . - . ID=LTnewLM_090014200.1:pep;Derives_from=LTnewLM_090014200.1;orthologous_to=LmjF.09.0810_mRNA;ortholog_cluster=OG0007350;product=term%3DPrefoldin subunit%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02996 LTnewLM_9 Pfam protein_match 322645 322887 . - . Parent=LTnewLM_090014200.1:pep;Name=PF02996;signature_desc=Prefoldin subunit ### LTnewLM_9 AUGUSTUS gene 323771 325450 1 - . ID=LTnewLM_090014300 LTnewLM_9 AUGUSTUS mRNA 323771 325450 1 - . ID=LTnewLM_090014300.1;Parent=LTnewLM_090014300 LTnewLM_9 AUGUSTUS CDS 323771 325450 1 - 0 ID=LTnewLM_090014300.1:CDS:1;Parent=LTnewLM_090014300.1 ### LTnewLM_9 . polypeptide 323771 325450 . - . ID=LTnewLM_090014300.1:pep;Derives_from=LTnewLM_090014300.1;orthologous_to=LmjF.09.0820_mRNA;ortholog_cluster=OG0007351;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 326391 328721 1 - . ID=LTnewLM_090014400 LTnewLM_9 AUGUSTUS mRNA 326391 328721 1 - . ID=LTnewLM_090014400.1;Parent=LTnewLM_090014400 LTnewLM_9 AUGUSTUS CDS 326391 328721 1 - 0 ID=LTnewLM_090014400.1:CDS:1;Parent=LTnewLM_090014400.1 ### LTnewLM_9 . polypeptide 326391 328721 . - . ID=LTnewLM_090014400.1:pep;Derives_from=LTnewLM_090014400.1;orthologous_to=LmjF.09.0830_mRNA;ortholog_cluster=OG0007352;product=term%3DDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00270|Pfam:PF00271;Ontology_term=GO:0003676,GO:0005524 LTnewLM_9 Pfam protein_match 326925 327212 . - . Parent=LTnewLM_090014400.1:pep;Name=PF00271;signature_desc=Helicase conserved C-terminal domain LTnewLM_9 Pfam protein_match 327771 328310 . - . Parent=LTnewLM_090014400.1:pep;Name=PF00270;signature_desc=DEAD/DEAH box helicase;Ontology_term=GO:0003676,GO:0005524 ### LTnewLM_9 AUGUSTUS gene 329386 330582 1 - . ID=LTnewLM_090014500 LTnewLM_9 AUGUSTUS mRNA 329386 330582 1 - . ID=LTnewLM_090014500.1;Parent=LTnewLM_090014500 LTnewLM_9 AUGUSTUS CDS 329386 330582 1 - 0 ID=LTnewLM_090014500.1:CDS:1;Parent=LTnewLM_090014500.1 ### LTnewLM_9 . polypeptide 329386 330582 . - . ID=LTnewLM_090014500.1:pep;Derives_from=LTnewLM_090014500.1;orthologous_to=LmjF.09.0840_mRNA;ortholog_cluster=OG0007353;product=term%3DUncharacterised protein family (UPF0160)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF03690 LTnewLM_9 Pfam protein_match 329404 330450 . - . Parent=LTnewLM_090014500.1:pep;Name=PF03690;signature_desc=Uncharacterised protein family (UPF0160) ### LTnewLM_9 AUGUSTUS gene 331466 332275 1 - . ID=LTnewLM_090014600 LTnewLM_9 AUGUSTUS mRNA 331466 332275 1 - . ID=LTnewLM_090014600.1;Parent=LTnewLM_090014600 LTnewLM_9 AUGUSTUS CDS 331466 332275 1 - 0 ID=LTnewLM_090014600.1:CDS:1;Parent=LTnewLM_090014600.1 ### LTnewLM_9 . polypeptide 331466 332275 . - . ID=LTnewLM_090014600.1:pep;Derives_from=LTnewLM_090014600.1;orthologous_to=LmjF.09.0850_mRNA;ortholog_cluster=OG0007354;product=term%3DRas of Complex%2C Roc%2C domain of DAPkinase/Ras family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08477|Pfam:PF00071;Ontology_term=GO:0007264,GO:0005622,GO:0005525 LTnewLM_9 Pfam protein_match 331487 331678 . - . Parent=LTnewLM_090014600.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_9 Pfam protein_match 331832 332002 . - . Parent=LTnewLM_090014600.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 LTnewLM_9 Pfam protein_match 331838 332002 . - . Parent=LTnewLM_090014600.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_9 Pfam protein_match 332087 332227 . - . Parent=LTnewLM_090014600.1:pep;Name=PF00071;signature_desc=Ras family;Ontology_term=GO:0005525,GO:0007264 LTnewLM_9 Pfam protein_match 332096 332227 . - . Parent=LTnewLM_090014600.1:pep;Name=PF08477;signature_desc=Ras of Complex%2C Roc%2C domain of DAPkinase;Ontology_term=GO:0005525,GO:0007264,GO:0005622 ### LTnewLM_9 AUGUSTUS gene 333352 333672 1 - . ID=LTnewLM_090014700 LTnewLM_9 AUGUSTUS mRNA 333352 333672 1 - . ID=LTnewLM_090014700.1;Parent=LTnewLM_090014700 LTnewLM_9 AUGUSTUS CDS 333352 333672 1 - 0 ID=LTnewLM_090014700.1:CDS:1;Parent=LTnewLM_090014700.1 ### LTnewLM_9 . polypeptide 333352 333672 . - . ID=LTnewLM_090014700.1:pep;Derives_from=LTnewLM_090014700.1;orthologous_to=LmjF.09.0860_mRNA;ortholog_cluster=OG0007355;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 334530 336101 1 - . ID=LTnewLM_090014800 LTnewLM_9 AUGUSTUS mRNA 334530 336101 1 - . ID=LTnewLM_090014800.1;Parent=LTnewLM_090014800 LTnewLM_9 AUGUSTUS CDS 334530 336101 1 - 0 ID=LTnewLM_090014800.1:CDS:1;Parent=LTnewLM_090014800.1 ### LTnewLM_9 . polypeptide 334530 336101 . - . ID=LTnewLM_090014800.1:pep;Derives_from=LTnewLM_090014800.1;orthologous_to=LmjF.09.0870_mRNA;ortholog_cluster=OG0007356;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 337066 338605 . - . ID=LTnewLM_090014900:pseudogene;coverage=0.997;sequence_ID=0.884;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0880_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 337066 338605 . - . ID=LTnewLM_090014900.1;Parent=LTnewLM_090014900:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 337066 338605 . - . ID=LTnewLM_090014900.1:pseudogenic_exon:1;Parent=LTnewLM_090014900.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 337066 338605 . - . ID=LTnewLM_090014900.1:pep;Derives_from=LTnewLM_090014900.1;orthologous_to=LmjF.09.0880_mRNA;ortholog_cluster=OG0007736;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 340483 348012 1 - . ID=LTnewLM_090015000 LTnewLM_9 AUGUSTUS mRNA 340483 348012 1 - . ID=LTnewLM_090015000.1;Parent=LTnewLM_090015000 LTnewLM_9 AUGUSTUS CDS 340483 348012 1 - 0 ID=LTnewLM_090015000.1:CDS:1;Parent=LTnewLM_090015000.1 ### LTnewLM_9 . polypeptide 340483 348012 . - . ID=LTnewLM_090015000.1:pep;Derives_from=LTnewLM_090015000.1;orthologous_to=LmjF.09.0890_mRNA;ortholog_cluster=OG0007357;product=term%3DPhospholipid-translocating ATPase N-terminal/Phospholipid-translocating P-type ATPase C-terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF16209|Pfam:PF16212 LTnewLM_9 Pfam protein_match 340651 341400 . - . Parent=LTnewLM_090015000.1:pep;Name=PF16212;signature_desc=Phospholipid-translocating P-type ATPase C-terminal LTnewLM_9 Pfam protein_match 347644 347826 . - . Parent=LTnewLM_090015000.1:pep;Name=PF16209;signature_desc=Phospholipid-translocating ATPase N-terminal ### LTnewLM_9 AUGUSTUS gene 350770 351156 1 - . ID=LTnewLM_090015100 LTnewLM_9 AUGUSTUS mRNA 350770 351156 1 - . ID=LTnewLM_090015100.1;Parent=LTnewLM_090015100 LTnewLM_9 AUGUSTUS CDS 350770 351156 1 - 0 ID=LTnewLM_090015100.1:CDS:1;Parent=LTnewLM_090015100.1 ### LTnewLM_9 . polypeptide 350770 351156 . - . ID=LTnewLM_090015100.1:pep;Derives_from=LTnewLM_090015100.1;product=term%3DUbiquitin-2 like Rad60 SUMO-like/Ubiquitin family/Ubiquitin-like domain/Ribosomal L40e family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF11976|Pfam:PF00240|Pfam:PF14560|Pfam:PF01020;Ontology_term=GO:0005840,GO:0005515,GO:0003735,GO:0006412 LTnewLM_9 Pfam protein_match 350779 350925 . - . Parent=LTnewLM_090015100.1:pep;Name=PF01020;signature_desc=Ribosomal L40e family;Ontology_term=GO:0003735,GO:0006412,GO:0005840 LTnewLM_9 Pfam protein_match 350938 351150 . - . Parent=LTnewLM_090015100.1:pep;Name=PF00240;signature_desc=Ubiquitin family;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 350947 351156 . - . Parent=LTnewLM_090015100.1:pep;Name=PF11976;signature_desc=Ubiquitin-2 like Rad60 SUMO-like LTnewLM_9 Pfam protein_match 350956 351117 . - . Parent=LTnewLM_090015100.1:pep;Name=PF14560;signature_desc=Ubiquitin-like domain;Ontology_term=GO:0005515 ### LTnewLM_9 AUGUSTUS gene 352006 352566 1 - . ID=LTnewLM_090015200 LTnewLM_9 AUGUSTUS mRNA 352006 352566 1 - . ID=LTnewLM_090015200.1;Parent=LTnewLM_090015200 LTnewLM_9 AUGUSTUS CDS 352006 352566 1 - 0 ID=LTnewLM_090015200.1:CDS:1;Parent=LTnewLM_090015200.1 ### LTnewLM_9 . polypeptide 352006 352566 . - . ID=LTnewLM_090015200.1:pep;Derives_from=LTnewLM_090015200.1;orthologous_to=LmjF.09.0900_mRNA;ortholog_cluster=OG0007358;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 354232 354681 1 - . ID=LTnewLM_090015300 LTnewLM_9 AUGUSTUS mRNA 354232 354681 1 - . ID=LTnewLM_090015300.1;Parent=LTnewLM_090015300 LTnewLM_9 AUGUSTUS CDS 354232 354681 1 - 0 ID=LTnewLM_090015300.1:CDS:1;Parent=LTnewLM_090015300.1 ### LTnewLM_9 . polypeptide 354232 354681 . - . ID=LTnewLM_090015300.1:pep;Derives_from=LTnewLM_090015300.1;orthologous_to=LTnewLM_090015400.1,LTnewLM_090015500.1,LmjF.09.0910_mRNA,LmjF.09.0920_mRNA,LmjF.09.0930_mRNA;ortholog_cluster=OG0000076;product=term%3DEF hand/EF-hand domain/EF-hand domain pair/Cytoskeletal-regulatory complex EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00036|Pfam:PF13405|Pfam:PF13499|Pfam:PF13202|Pfam:PF14658|Pfam:PF13833|Pfam:PF12763;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354241 354321 . - . Parent=LTnewLM_090015300.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354247 354312 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354247 354390 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 354247 354435 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 354247 354435 . - . Parent=LTnewLM_090015300.1:pep;Name=PF12763;signature_desc=Cytoskeletal-regulatory complex EF hand LTnewLM_9 Pfam protein_match 354343 354429 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354349 354429 . - . Parent=LTnewLM_090015300.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354355 354426 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354370 354438 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 354460 354540 . - . Parent=LTnewLM_090015300.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354460 354609 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 354460 354636 . - . Parent=LTnewLM_090015300.1:pep;Name=PF14658;signature_desc=EF-hand domain LTnewLM_9 Pfam protein_match 354466 354537 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354466 354648 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 354562 354648 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354565 354648 . - . Parent=LTnewLM_090015300.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 354574 354642 . - . Parent=LTnewLM_090015300.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_9 AUGUSTUS gene 355982 356431 1 - . ID=LTnewLM_090015400 LTnewLM_9 AUGUSTUS mRNA 355982 356431 1 - . ID=LTnewLM_090015400.1;Parent=LTnewLM_090015400 LTnewLM_9 AUGUSTUS CDS 355982 356431 1 - 0 ID=LTnewLM_090015400.1:CDS:1;Parent=LTnewLM_090015400.1 ### LTnewLM_9 . polypeptide 355982 356431 . - . ID=LTnewLM_090015400.1:pep;Derives_from=LTnewLM_090015400.1;orthologous_to=LTnewLM_090015300.1,LTnewLM_090015500.1,LmjF.09.0910_mRNA,LmjF.09.0920_mRNA,LmjF.09.0930_mRNA;ortholog_cluster=OG0000076;product=term%3DEF hand/EF-hand domain/EF-hand domain pair/Cytoskeletal-regulatory complex EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00036|Pfam:PF13405|Pfam:PF13499|Pfam:PF13202|Pfam:PF14658|Pfam:PF13833|Pfam:PF12763;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 355991 356071 . - . Parent=LTnewLM_090015400.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 355997 356062 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 355997 356140 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 355997 356185 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 355997 356185 . - . Parent=LTnewLM_090015400.1:pep;Name=PF12763;signature_desc=Cytoskeletal-regulatory complex EF hand LTnewLM_9 Pfam protein_match 356093 356179 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356099 356179 . - . Parent=LTnewLM_090015400.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356105 356176 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356120 356188 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 356210 356290 . - . Parent=LTnewLM_090015400.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356210 356359 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 356210 356386 . - . Parent=LTnewLM_090015400.1:pep;Name=PF14658;signature_desc=EF-hand domain LTnewLM_9 Pfam protein_match 356216 356287 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356216 356398 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 356312 356398 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356315 356398 . - . Parent=LTnewLM_090015400.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 356324 356392 . - . Parent=LTnewLM_090015400.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_9 AUGUSTUS gene 357799 358248 1 - . ID=LTnewLM_090015500 LTnewLM_9 AUGUSTUS mRNA 357799 358248 1 - . ID=LTnewLM_090015500.1;Parent=LTnewLM_090015500 LTnewLM_9 AUGUSTUS CDS 357799 358248 1 - 0 ID=LTnewLM_090015500.1:CDS:1;Parent=LTnewLM_090015500.1 ### LTnewLM_9 . polypeptide 357799 358248 . - . ID=LTnewLM_090015500.1:pep;Derives_from=LTnewLM_090015500.1;orthologous_to=LTnewLM_090015300.1,LTnewLM_090015400.1,LmjF.09.0910_mRNA,LmjF.09.0920_mRNA,LmjF.09.0930_mRNA;ortholog_cluster=OG0000076;product=term%3DEF hand/EF-hand domain/EF-hand domain pair/Cytoskeletal-regulatory complex EF hand%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00036|Pfam:PF13405|Pfam:PF13499|Pfam:PF13202|Pfam:PF14658|Pfam:PF13833|Pfam:PF12763;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357808 357888 . - . Parent=LTnewLM_090015500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357814 357879 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357814 357957 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 357814 358002 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 357814 358002 . - . Parent=LTnewLM_090015500.1:pep;Name=PF12763;signature_desc=Cytoskeletal-regulatory complex EF hand LTnewLM_9 Pfam protein_match 357910 357996 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357916 357996 . - . Parent=LTnewLM_090015500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357922 357993 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 357937 358005 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 358027 358107 . - . Parent=LTnewLM_090015500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 358027 358176 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13833;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 358027 358203 . - . Parent=LTnewLM_090015500.1:pep;Name=PF14658;signature_desc=EF-hand domain LTnewLM_9 Pfam protein_match 358033 358104 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 358033 358215 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13499;signature_desc=EF-hand domain pair LTnewLM_9 Pfam protein_match 358129 358215 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13405;signature_desc=EF-hand domain;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 358132 358215 . - . Parent=LTnewLM_090015500.1:pep;Name=PF00036;signature_desc=EF hand;Ontology_term=GO:0005509 LTnewLM_9 Pfam protein_match 358141 358209 . - . Parent=LTnewLM_090015500.1:pep;Name=PF13202;signature_desc=EF hand;Ontology_term=GO:0005509 ### LTnewLM_9 AUGUSTUS gene 359217 362897 1 - . ID=LTnewLM_090015600 LTnewLM_9 AUGUSTUS mRNA 359217 362897 1 - . ID=LTnewLM_090015600.1;Parent=LTnewLM_090015600 LTnewLM_9 AUGUSTUS CDS 359217 362897 1 - 0 ID=LTnewLM_090015600.1:CDS:1;Parent=LTnewLM_090015600.1 ### LTnewLM_9 . polypeptide 359217 362897 . - . ID=LTnewLM_090015600.1:pep;Derives_from=LTnewLM_090015600.1;orthologous_to=LmjF.09.0940_mRNA;ortholog_cluster=OG0007359;product=term%3DNFACT N-terminal and middle domains/NFACT protein RNA binding domain/NFACT protein C-terminal domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05833|Pfam:PF05670|Pfam:PF11923 LTnewLM_9 Pfam protein_match 359475 359660 . - . Parent=LTnewLM_090015600.1:pep;Name=PF11923;signature_desc=NFACT protein C-terminal domain LTnewLM_9 Pfam protein_match 360783 361145 . - . Parent=LTnewLM_090015600.1:pep;Name=PF05670;signature_desc=NFACT protein RNA binding domain LTnewLM_9 Pfam protein_match 361233 362183 . - . Parent=LTnewLM_090015600.1:pep;Name=PF05833;signature_desc=NFACT N-terminal and middle domains LTnewLM_9 Pfam protein_match 362472 362876 . - . Parent=LTnewLM_090015600.1:pep;Name=PF05833;signature_desc=NFACT N-terminal and middle domains ### LTnewLM_9 AUGUSTUS gene 363338 365125 1 - . ID=LTnewLM_090015700 LTnewLM_9 AUGUSTUS mRNA 363338 365125 1 - . ID=LTnewLM_090015700.1;Parent=LTnewLM_090015700 LTnewLM_9 AUGUSTUS CDS 363338 365125 1 - 0 ID=LTnewLM_090015700.1:CDS:1;Parent=LTnewLM_090015700.1 ### LTnewLM_9 . polypeptide 363338 365125 . - . ID=LTnewLM_090015700.1:pep;Derives_from=LTnewLM_090015700.1;orthologous_to=LmjF.09.0950_mRNA;ortholog_cluster=OG0007360;product=term%3DO-phosphoseryl-tRNA(Sec) selenium transferase%2C SepSecS%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05889;Ontology_term=GO:0016740 LTnewLM_9 Pfam protein_match 363362 364267 . - . Parent=LTnewLM_090015700.1:pep;Name=PF05889;signature_desc=O-phosphoseryl-tRNA(Sec) selenium transferase%2C SepSecS;Ontology_term=GO:0016740 LTnewLM_9 Pfam protein_match 364658 364945 . - . Parent=LTnewLM_090015700.1:pep;Name=PF05889;signature_desc=O-phosphoseryl-tRNA(Sec) selenium transferase%2C SepSecS;Ontology_term=GO:0016740 ### LTnewLM_9 AUGUSTUS gene 365956 368067 1 - . ID=LTnewLM_090015800 LTnewLM_9 AUGUSTUS mRNA 365956 368067 1 - . ID=LTnewLM_090015800.1;Parent=LTnewLM_090015800 LTnewLM_9 AUGUSTUS CDS 365956 368067 1 - 0 ID=LTnewLM_090015800.1:CDS:1;Parent=LTnewLM_090015800.1 ### LTnewLM_9 . polypeptide 365956 368067 . - . ID=LTnewLM_090015800.1:pep;Derives_from=LTnewLM_090015800.1;orthologous_to=LmjF.09.0960_mRNA;ortholog_cluster=OG0007361;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 369649 370863 1 - . ID=LTnewLM_090015900 LTnewLM_9 AUGUSTUS mRNA 369649 370863 1 - . ID=LTnewLM_090015900.1;Parent=LTnewLM_090015900 LTnewLM_9 AUGUSTUS CDS 369649 370863 1 - 0 ID=LTnewLM_090015900.1:CDS:1;Parent=LTnewLM_090015900.1 ### LTnewLM_9 . polypeptide 369649 370863 . - . ID=LTnewLM_090015900.1:pep;Derives_from=LTnewLM_090015900.1;orthologous_to=LTnewLM_090016000.1,LmjF.09.0970_mRNA;ortholog_cluster=OG0000508;product=term%3DGlutathione S-transferase%2C N-terminal domain/Glutathione S-transferase%2C C-terminal domain/Elongation factor 1 gamma%2C conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02798|Pfam:PF00043|Pfam:PF14497|Pfam:PF00647;Ontology_term=GO:0005515,GO:0003746,GO:0006414 LTnewLM_9 Pfam protein_match 369811 370125 . - . Parent=LTnewLM_090015900.1:pep;Name=PF00647;signature_desc=Elongation factor 1 gamma%2C conserved domain;Ontology_term=GO:0003746,GO:0006414 LTnewLM_9 Pfam protein_match 370258 370470 . - . Parent=LTnewLM_090015900.1:pep;Name=PF14497;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_9 Pfam protein_match 370273 370533 . - . Parent=LTnewLM_090015900.1:pep;Name=PF00043;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_9 Pfam protein_match 370633 370836 . - . Parent=LTnewLM_090015900.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 ### LTnewLM_9 AUGUSTUS gene 371123 372340 1 - . ID=LTnewLM_090016000 LTnewLM_9 AUGUSTUS mRNA 371123 372340 1 - . ID=LTnewLM_090016000.1;Parent=LTnewLM_090016000 LTnewLM_9 AUGUSTUS CDS 371123 372340 1 - 0 ID=LTnewLM_090016000.1:CDS:1;Parent=LTnewLM_090016000.1 ### LTnewLM_9 . polypeptide 371123 372340 . - . ID=LTnewLM_090016000.1:pep;Derives_from=LTnewLM_090016000.1;orthologous_to=LTnewLM_090015900.1,LmjF.09.0970_mRNA;ortholog_cluster=OG0000508;product=term%3DGlutathione S-transferase%2C N-terminal domain/Glutathione S-transferase%2C C-terminal domain/Elongation factor 1 gamma%2C conserved domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02798|Pfam:PF00043|Pfam:PF14497|Pfam:PF00647;Ontology_term=GO:0005515,GO:0003746,GO:0006414 LTnewLM_9 Pfam protein_match 371288 371602 . - . Parent=LTnewLM_090016000.1:pep;Name=PF00647;signature_desc=Elongation factor 1 gamma%2C conserved domain;Ontology_term=GO:0003746,GO:0006414 LTnewLM_9 Pfam protein_match 371735 371947 . - . Parent=LTnewLM_090016000.1:pep;Name=PF14497;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_9 Pfam protein_match 371750 372028 . - . Parent=LTnewLM_090016000.1:pep;Name=PF00043;signature_desc=Glutathione S-transferase%2C C-terminal domain LTnewLM_9 Pfam protein_match 372110 372313 . - . Parent=LTnewLM_090016000.1:pep;Name=PF02798;signature_desc=Glutathione S-transferase%2C N-terminal domain;Ontology_term=GO:0005515 ### LTnewLM_9 . pseudogene 374276 377613 . - . ID=LTnewLM_090016100:pseudogene;coverage=0.984;sequence_ID=0.921;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.0980_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 374276 377613 . - . ID=LTnewLM_090016100.1;Parent=LTnewLM_090016100:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 374276 377613 . - . ID=LTnewLM_090016100.1:pseudogenic_exon:1;Parent=LTnewLM_090016100.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 374276 377613 . - . ID=LTnewLM_090016100.1:pep;Derives_from=LTnewLM_090016100.1;orthologous_to=LmjF.09.0980_mRNA;ortholog_cluster=OG0007737;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . polypeptide 379406 385099 . - . ID=LTnewLM_090016200.1:pep;Derives_from=LTnewLM_090016200.1;orthologous_to=LTnewLM_090016200.2,LmjF.09.0990_mRNA;ortholog_cluster=OG0000509;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 379406 395488 1.55 - . ID=LTnewLM_090016200 LTnewLM_9 AUGUSTUS mRNA 379406 385099 1 - . ID=LTnewLM_090016200.1;Parent=LTnewLM_090016200 LTnewLM_9 AUGUSTUS CDS 379406 385099 1 - 0 ID=LTnewLM_090016200.1:CDS:1;Parent=LTnewLM_090016200.1 LTnewLM_9 AUGUSTUS mRNA 379406 395488 0.55 - . ID=LTnewLM_090016200.2;Parent=LTnewLM_090016200 LTnewLM_9 AUGUSTUS CDS 379406 386176 0.67 - 0 ID=LTnewLM_090016200.2:CDS:1;Parent=LTnewLM_090016200.2 LTnewLM_9 AUGUSTUS CDS 386234 395488 0.55 - 0 ID=LTnewLM_090016200.2:CDS:2;Parent=LTnewLM_090016200.2 ### LTnewLM_9 . polypeptide 379406 395488 . - . ID=LTnewLM_090016200.2:pep;Derives_from=LTnewLM_090016200.2;orthologous_to=LTnewLM_090016200.1,LmjF.09.0990_mRNA;ortholog_cluster=OG0000509;product=term%3DN-terminal region of Chorein or VPS13%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12624 LTnewLM_9 Pfam protein_match 395177 395482 . - . Parent=LTnewLM_090016200.2:pep;Name=PF12624;signature_desc=N-terminal region of Chorein or VPS13 ### LTnewLM_9 AUGUSTUS gene 395972 396910 1 - . ID=LTnewLM_090016300 LTnewLM_9 AUGUSTUS mRNA 395972 396910 1 - . ID=LTnewLM_090016300.1;Parent=LTnewLM_090016300 LTnewLM_9 AUGUSTUS CDS 395972 396910 1 - 0 ID=LTnewLM_090016300.1:CDS:1;Parent=LTnewLM_090016300.1 ### LTnewLM_9 . polypeptide 395972 396910 . - . ID=LTnewLM_090016300.1:pep;Derives_from=LTnewLM_090016300.1;orthologous_to=LmjF.09.1000_mRNA;ortholog_cluster=OG0007362;product=term%3DPUB domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09409 LTnewLM_9 Pfam protein_match 396629 396853 . - . Parent=LTnewLM_090016300.1:pep;Name=PF09409;signature_desc=PUB domain ### LTnewLM_9 Aragorn_1.2.36 gene 397417 397490 . + . ID=LTnewLM_090016400 LTnewLM_9 Aragorn_1.2.36 tRNA 397417 397490 . + . ID=LTnewLM_090016400:tRNA;Parent=LTnewLM_090016400;aa=Val;anticodon=cac;gc_content=60.8 ### LTnewLM_9 GenomeTools gene 397555 397673 93 + . ID=LTnewLM_090016500 LTnewLM_9 INFERNAL rRNA 397555 397673 93 + . ID=LTnewLM_090016500:rRNA;Parent=LTnewLM_090016500;gc=0.50;evalue=9e-21;score=93.0;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_9 Liftoff gene 397555 397673 . + . ID=LTnewLM_090016600;coverage=1.0;sequence_ID=1.0;extra_copy_number=0;copy_num_ID=LmjF.05.5SrRNA.01_0 LTnewLM_9 Liftoff rRNA 397555 397673 . + . ID=LTnewLM_090016600:rRNA;Parent=LTnewLM_090016600;extra_copy_number=0 ### LTnewLM_9 Aragorn_1.2.36 gene 397736 397806 . + . ID=LTnewLM_090016700 LTnewLM_9 Aragorn_1.2.36 tRNA 397736 397806 . + . ID=LTnewLM_090016700:tRNA;Parent=LTnewLM_090016700;aa=His;anticodon=gtg;gc_content=53.5 ### LTnewLM_9 Aragorn_1.2.36 gene 397987 398059 . - . ID=LTnewLM_090016800 LTnewLM_9 Aragorn_1.2.36 tRNA 397987 398059 . - . ID=LTnewLM_090016800:tRNA;Parent=LTnewLM_090016800;aa=Phe;anticodon=gaa;gc_content=61.6 ### LTnewLM_9 AUGUSTUS gene 399069 399830 1 + . ID=LTnewLM_090016900 LTnewLM_9 AUGUSTUS mRNA 399069 399830 1 + . ID=LTnewLM_090016900.1;Parent=LTnewLM_090016900 LTnewLM_9 AUGUSTUS CDS 399069 399830 1 + 0 ID=LTnewLM_090016900.1:CDS:1;Parent=LTnewLM_090016900.1 ### LTnewLM_9 . polypeptide 399069 399830 . + . ID=LTnewLM_090016900.1:pep;Derives_from=LTnewLM_090016900.1;orthologous_to=LTnewLM_180021400.1,LmjF.18.1570_mRNA;ortholog_cluster=OG0000363;product=term%3DUEV domain/Zinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05743|Pfam:PF13920;Ontology_term=GO:0006464,GO:0015031 LTnewLM_9 Pfam protein_match 399318 399566 . + . Parent=LTnewLM_090016900.1:pep;Name=PF05743;signature_desc=UEV domain;Ontology_term=GO:0006464,GO:0015031 LTnewLM_9 Pfam protein_match 399687 399800 . + . Parent=LTnewLM_090016900.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_9 AUGUSTUS gene 400543 402390 1 + . ID=LTnewLM_090017000 LTnewLM_9 AUGUSTUS mRNA 400543 402390 1 + . ID=LTnewLM_090017000.1;Parent=LTnewLM_090017000 LTnewLM_9 AUGUSTUS CDS 400543 402390 1 + 0 ID=LTnewLM_090017000.1:CDS:1;Parent=LTnewLM_090017000.1 ### LTnewLM_9 . polypeptide 400543 402390 . + . ID=LTnewLM_090017000.1:pep;Derives_from=LTnewLM_090017000.1;orthologous_to=LmjF.09.1010_mRNA;ortholog_cluster=OG0007363;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 407883 408152 1 + . ID=LTnewLM_090017100 LTnewLM_9 AUGUSTUS mRNA 407883 408152 1 + . ID=LTnewLM_090017100.1;Parent=LTnewLM_090017100 LTnewLM_9 AUGUSTUS CDS 407883 408152 1 + 0 ID=LTnewLM_090017100.1:CDS:1;Parent=LTnewLM_090017100.1 ### LTnewLM_9 . polypeptide 407883 408152 . + . ID=LTnewLM_090017100.1:pep;Derives_from=LTnewLM_090017100.1;product=term%3Dhypothetical protein ### LTnewLM_9 Aragorn_1.2.36 gene 410215 410286 . - . ID=LTnewLM_090017200 LTnewLM_9 Aragorn_1.2.36 tRNA 410215 410286 . - . ID=LTnewLM_090017200:tRNA;Parent=LTnewLM_090017200;aa=Glu;anticodon=ttc;gc_content=52.8 ### LTnewLM_9 GenomeTools gene 410345 410463 93 - . ID=LTnewLM_090017300 LTnewLM_9 INFERNAL rRNA 410345 410463 93 - . ID=LTnewLM_090017300:rRNA;Parent=LTnewLM_090017300;gc=0.50;evalue=9e-21;score=93.0;model_name=5S_rRNA;model_acc=RF00001;model_range=1-119 ### LTnewLM_9 Liftoff gene 410345 410465 . - . ID=LTnewLM_090017400;coverage=1.0;sequence_ID=0.983;extra_copy_number=0;copy_num_ID=LmjF.09.5SrRNA.01_0 LTnewLM_9 Liftoff rRNA 410345 410465 . - . ID=LTnewLM_090017400:rRNA;Parent=LTnewLM_090017400;extra_copy_number=0 ### LTnewLM_9 Aragorn_1.2.36 gene 410525 410601 . - . ID=LTnewLM_090017500 LTnewLM_9 Aragorn_1.2.36 tRNA 410525 410601 . - . ID=LTnewLM_090017500:tRNA;Parent=LTnewLM_090017500;aa=Val;anticodon=cac;gc_content=61.0 ### LTnewLM_9 Aragorn_1.2.36 gene 410675 410747 . + . ID=LTnewLM_090017600 LTnewLM_9 Aragorn_1.2.36 tRNA 410675 410747 . + . ID=LTnewLM_090017600:tRNA;Parent=LTnewLM_090017600;aa=Arg;anticodon=ccg;gc_content=61.6 ### LTnewLM_9 Aragorn_1.2.36 gene 410813 410883 . + . ID=LTnewLM_090017700 LTnewLM_9 Aragorn_1.2.36 tRNA 410813 410883 . + . ID=LTnewLM_090017700:tRNA;Parent=LTnewLM_090017700;aa=His;anticodon=gtg;gc_content=53.5 ### LTnewLM_9 . pseudogene 411848 413639 . - . ID=LTnewLM_090017800:pseudogene;coverage=0.998;sequence_ID=0.940;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.1020_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 411848 413639 . - . ID=LTnewLM_090017800.1;Parent=LTnewLM_090017800:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 411848 413639 . - . ID=LTnewLM_090017800.1:pseudogenic_exon:1;Parent=LTnewLM_090017800.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 411848 413639 . - . ID=LTnewLM_090017800.1:pep;Derives_from=LTnewLM_090017800.1;product=term%3Dhypothetical protein ### LTnewLM_9 Liftoff gene 414749 416032 . - . ID=LTnewLM_090017900;coverage=1.0;sequence_ID=0.927;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.1030_0 LTnewLM_9 Liftoff mRNA 414749 416032 . - . ID=LTnewLM_090017900.1;Parent=LTnewLM_090017900;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 414749 416032 . - 0 ID=LTnewLM_090017900.1:CDS:1;Parent=LTnewLM_090017900.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 414749 416032 . - . ID=LTnewLM_090017900.1:pep;Derives_from=LTnewLM_090017900.1;orthologous_to=LmjF.09.1030_mRNA;ortholog_cluster=OG0007364;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 417712 419982 1 - . ID=LTnewLM_090018000 LTnewLM_9 AUGUSTUS mRNA 417712 419982 1 - . ID=LTnewLM_090018000.1;Parent=LTnewLM_090018000 LTnewLM_9 AUGUSTUS CDS 417712 419982 1 - 0 ID=LTnewLM_090018000.1:CDS:1;Parent=LTnewLM_090018000.1 ### LTnewLM_9 . polypeptide 417712 419982 . - . ID=LTnewLM_090018000.1:pep;Derives_from=LTnewLM_090018000.1;orthologous_to=LmjF.09.1040_mRNA;ortholog_cluster=OG0007365;product=term%3DLecithin:cholesterol acyltransferase/Alpha/beta hydrolase family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02450|Pfam:PF12697;Ontology_term=GO:0008374,GO:0006629 LTnewLM_9 Pfam protein_match 418009 418359 . - . Parent=LTnewLM_090018000.1:pep;Name=PF02450;signature_desc=Lecithin:cholesterol acyltransferase;Ontology_term=GO:0008374,GO:0006629 LTnewLM_9 Pfam protein_match 418492 419118 . - . Parent=LTnewLM_090018000.1:pep;Name=PF02450;signature_desc=Lecithin:cholesterol acyltransferase;Ontology_term=GO:0008374,GO:0006629 LTnewLM_9 Pfam protein_match 418522 418992 . - . Parent=LTnewLM_090018000.1:pep;Name=PF12697;signature_desc=Alpha/beta hydrolase family ### LTnewLM_9 AUGUSTUS gene 422789 423529 1 - . ID=LTnewLM_090018100 LTnewLM_9 AUGUSTUS mRNA 422789 423529 1 - . ID=LTnewLM_090018100.1;Parent=LTnewLM_090018100 LTnewLM_9 AUGUSTUS CDS 422789 423529 1 - 0 ID=LTnewLM_090018100.1:CDS:1;Parent=LTnewLM_090018100.1 ### LTnewLM_9 . polypeptide 422789 423529 . - . ID=LTnewLM_090018100.1:pep;Derives_from=LTnewLM_090018100.1;orthologous_to=LmjF.09.1050_mRNA;ortholog_cluster=OG0007366;product=term%3DMSP (Major sperm protein) domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00635 LTnewLM_9 Pfam protein_match 423239 423487 . - . Parent=LTnewLM_090018100.1:pep;Name=PF00635;signature_desc=MSP (Major sperm protein) domain ### LTnewLM_9 AUGUSTUS gene 424732 425625 1 - . ID=LTnewLM_090018200 LTnewLM_9 AUGUSTUS mRNA 424732 425625 1 - . ID=LTnewLM_090018200.1;Parent=LTnewLM_090018200 LTnewLM_9 AUGUSTUS CDS 424732 425625 1 - 0 ID=LTnewLM_090018200.1:CDS:1;Parent=LTnewLM_090018200.1 ### LTnewLM_9 . polypeptide 424732 425625 . - . ID=LTnewLM_090018200.1:pep;Derives_from=LTnewLM_090018200.1;orthologous_to=LmjF.09.1060_mRNA;ortholog_cluster=OG0007367;product=term%3DRNA polymerase III subunit Rpc25%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF08292 LTnewLM_9 Pfam protein_match 424756 425250 . - . Parent=LTnewLM_090018200.1:pep;Name=PF08292;signature_desc=RNA polymerase III subunit Rpc25 ### LTnewLM_9 AUGUSTUS gene 427220 428659 1 - . ID=LTnewLM_090018300 LTnewLM_9 AUGUSTUS mRNA 427220 428659 1 - . ID=LTnewLM_090018300.1;Parent=LTnewLM_090018300 LTnewLM_9 AUGUSTUS CDS 427220 428659 1 - 0 ID=LTnewLM_090018300.1:CDS:1;Parent=LTnewLM_090018300.1 ### LTnewLM_9 . polypeptide 427220 428659 . - . ID=LTnewLM_090018300.1:pep;Derives_from=LTnewLM_090018300.1;orthologous_to=LmjF.09.1070_mRNA;ortholog_cluster=OG0007368;product=term%3DElongation factor Tu GTP binding domain/Initiation factor eIF2 gamma%2C C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF09173;Ontology_term=GO:0003924,GO:0005525 LTnewLM_9 Pfam protein_match 427256 427531 . - . Parent=LTnewLM_090018300.1:pep;Name=PF09173;signature_desc=Initiation factor eIF2 gamma%2C C terminal LTnewLM_9 Pfam protein_match 427931 428515 . - . Parent=LTnewLM_090018300.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_9 AUGUSTUS gene 429654 431459 1 - . ID=LTnewLM_090018400 LTnewLM_9 AUGUSTUS mRNA 429654 431459 1 - . ID=LTnewLM_090018400.1;Parent=LTnewLM_090018400 LTnewLM_9 AUGUSTUS CDS 429654 431459 1 - 0 ID=LTnewLM_090018400.1:CDS:1;Parent=LTnewLM_090018400.1 ### LTnewLM_9 . polypeptide 429654 431459 . - . ID=LTnewLM_090018400.1:pep;Derives_from=LTnewLM_090018400.1;orthologous_to=LmjF.09.1090_mRNA;ortholog_cluster=OG0007369;product=term%3DElongation factor Tu GTP binding domain/Initiation factor eIF2 gamma%2C C terminal%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00009|Pfam:PF09173;Ontology_term=GO:0003924,GO:0005525 LTnewLM_9 Pfam protein_match 429702 429926 . - . Parent=LTnewLM_090018400.1:pep;Name=PF09173;signature_desc=Initiation factor eIF2 gamma%2C C terminal LTnewLM_9 Pfam protein_match 430725 431315 . - . Parent=LTnewLM_090018400.1:pep;Name=PF00009;signature_desc=Elongation factor Tu GTP binding domain;Ontology_term=GO:0003924,GO:0005525 ### LTnewLM_9 AUGUSTUS gene 432748 433596 1 - . ID=LTnewLM_090018500 LTnewLM_9 AUGUSTUS mRNA 432748 433596 1 - . ID=LTnewLM_090018500.1;Parent=LTnewLM_090018500 LTnewLM_9 AUGUSTUS CDS 432748 433596 1 - 0 ID=LTnewLM_090018500.1:CDS:1;Parent=LTnewLM_090018500.1 ### LTnewLM_9 . polypeptide 432748 433596 . - . ID=LTnewLM_090018500.1:pep;Derives_from=LTnewLM_090018500.1;orthologous_to=LmjF.09.1100_mRNA;ortholog_cluster=OG0007370;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 436591 437967 1 - . ID=LTnewLM_090018600 LTnewLM_9 AUGUSTUS mRNA 436591 437967 1 - . ID=LTnewLM_090018600.1;Parent=LTnewLM_090018600 LTnewLM_9 AUGUSTUS CDS 436591 437967 1 - 0 ID=LTnewLM_090018600.1:CDS:1;Parent=LTnewLM_090018600.1 ### LTnewLM_9 . polypeptide 436591 437967 . - . ID=LTnewLM_090018600.1:pep;Derives_from=LTnewLM_090018600.1;orthologous_to=LmjF.09.1110_mRNA;ortholog_cluster=OG0007371;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 438965 439693 1 - . ID=LTnewLM_090018700 LTnewLM_9 AUGUSTUS mRNA 438965 439693 1 - . ID=LTnewLM_090018700.1;Parent=LTnewLM_090018700 LTnewLM_9 AUGUSTUS CDS 438965 439693 1 - 0 ID=LTnewLM_090018700.1:CDS:1;Parent=LTnewLM_090018700.1 ### LTnewLM_9 . polypeptide 438965 439693 . - . ID=LTnewLM_090018700.1:pep;Derives_from=LTnewLM_090018700.1;orthologous_to=LmjF.09.1120_mRNA;ortholog_cluster=OG0007372;product=term%3DMitochondrial RNA binding protein MRP%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF09387 LTnewLM_9 Pfam protein_match 438986 439543 . - . Parent=LTnewLM_090018700.1:pep;Name=PF09387;signature_desc=Mitochondrial RNA binding protein MRP ### LTnewLM_9 AUGUSTUS gene 440669 441127 1 - . ID=LTnewLM_090018800 LTnewLM_9 AUGUSTUS mRNA 440669 441127 1 - . ID=LTnewLM_090018800.1;Parent=LTnewLM_090018800 LTnewLM_9 AUGUSTUS CDS 440669 441127 1 - 0 ID=LTnewLM_090018800.1:CDS:1;Parent=LTnewLM_090018800.1 ### LTnewLM_9 . polypeptide 440669 441127 . - . ID=LTnewLM_090018800.1:pep;Derives_from=LTnewLM_090018800.1;orthologous_to=LmjF.09.1130_mRNA;ortholog_cluster=OG0007373;product=term%3DTim17/Tim22/Tim23/Pmp24 family%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF02466 LTnewLM_9 Pfam protein_match 440720 441046 . - . Parent=LTnewLM_090018800.1:pep;Name=PF02466;signature_desc=Tim17/Tim22/Tim23/Pmp24 family ### LTnewLM_9 AUGUSTUS gene 442161 442856 1 - . ID=LTnewLM_090018900 LTnewLM_9 AUGUSTUS mRNA 442161 442856 1 - . ID=LTnewLM_090018900.1;Parent=LTnewLM_090018900 LTnewLM_9 AUGUSTUS CDS 442161 442856 1 - 0 ID=LTnewLM_090018900.1:CDS:1;Parent=LTnewLM_090018900.1 ### LTnewLM_9 . polypeptide 442161 442856 . - . ID=LTnewLM_090018900.1:pep;Derives_from=LTnewLM_090018900.1;orthologous_to=LmjF.09.1140_mRNA;ortholog_cluster=OG0007374;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 443373 444230 1 - . ID=LTnewLM_090019000 LTnewLM_9 AUGUSTUS mRNA 443373 444230 1 - . ID=LTnewLM_090019000.1;Parent=LTnewLM_090019000 LTnewLM_9 AUGUSTUS CDS 443373 444230 1 - 0 ID=LTnewLM_090019000.1:CDS:1;Parent=LTnewLM_090019000.1 ### LTnewLM_9 . polypeptide 443373 444230 . - . ID=LTnewLM_090019000.1:pep;Derives_from=LTnewLM_090019000.1;orthologous_to=LmjF.09.1150_mRNA;ortholog_cluster=OG0007375;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 445226 447445 1 - . ID=LTnewLM_090019100 LTnewLM_9 AUGUSTUS mRNA 445226 447445 1 - . ID=LTnewLM_090019100.1;Parent=LTnewLM_090019100 LTnewLM_9 AUGUSTUS CDS 445226 447445 1 - 0 ID=LTnewLM_090019100.1:CDS:1;Parent=LTnewLM_090019100.1 ### LTnewLM_9 . polypeptide 445226 447445 . - . ID=LTnewLM_090019100.1:pep;Derives_from=LTnewLM_090019100.1;orthologous_to=LmjF.09.1160_mRNA;ortholog_cluster=OG0007376;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 449174 449764 1 - . ID=LTnewLM_090019200 LTnewLM_9 AUGUSTUS mRNA 449174 449764 1 - . ID=LTnewLM_090019200.1;Parent=LTnewLM_090019200 LTnewLM_9 AUGUSTUS CDS 449174 449764 1 - 0 ID=LTnewLM_090019200.1:CDS:1;Parent=LTnewLM_090019200.1 ### LTnewLM_9 . polypeptide 449174 449764 . - . ID=LTnewLM_090019200.1:pep;Derives_from=LTnewLM_090019200.1;orthologous_to=LmjF.09.1170_mRNA;ortholog_cluster=OG0007377;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 451018 454032 1 - . ID=LTnewLM_090019300 LTnewLM_9 AUGUSTUS mRNA 451018 454032 1 - . ID=LTnewLM_090019300.1;Parent=LTnewLM_090019300 LTnewLM_9 AUGUSTUS CDS 451018 454032 1 - 0 ID=LTnewLM_090019300.1:CDS:1;Parent=LTnewLM_090019300.1 ### LTnewLM_9 . polypeptide 451018 454032 . - . ID=LTnewLM_090019300.1:pep;Derives_from=LTnewLM_090019300.1;orthologous_to=LmjF.09.1180_mRNA;ortholog_cluster=OG0007378;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 457013 458802 . - . ID=LTnewLM_090019400:pseudogene;coverage=0.979;sequence_ID=0.901;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.1190_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 457013 458802 . - . ID=LTnewLM_090019400.1;Parent=LTnewLM_090019400:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 457013 458802 . - . ID=LTnewLM_090019400.1:pseudogenic_exon:1;Parent=LTnewLM_090019400.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 457013 458802 . - . ID=LTnewLM_090019400.1:pep;Derives_from=LTnewLM_090019400.1;orthologous_to=LmjF.09.1190_mRNA;ortholog_cluster=OG0007738;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 459354 463979 1 - . ID=LTnewLM_090019500 LTnewLM_9 AUGUSTUS mRNA 459354 463979 1 - . ID=LTnewLM_090019500.1;Parent=LTnewLM_090019500 LTnewLM_9 AUGUSTUS CDS 459354 463979 1 - 0 ID=LTnewLM_090019500.1:CDS:1;Parent=LTnewLM_090019500.1 ### LTnewLM_9 . polypeptide 459354 463979 . - . ID=LTnewLM_090019500.1:pep;Derives_from=LTnewLM_090019500.1;orthologous_to=LmjF.09.1200_mRNA;ortholog_cluster=OG0007379;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 465081 466343 1 - . ID=LTnewLM_090019600 LTnewLM_9 AUGUSTUS mRNA 465081 466343 1 - . ID=LTnewLM_090019600.1;Parent=LTnewLM_090019600 LTnewLM_9 AUGUSTUS CDS 465081 466343 1 - 0 ID=LTnewLM_090019600.1:CDS:1;Parent=LTnewLM_090019600.1 ### LTnewLM_9 . polypeptide 465081 466343 . - . ID=LTnewLM_090019600.1:pep;Derives_from=LTnewLM_090019600.1;orthologous_to=LmjF.09.1210_mRNA;ortholog_cluster=OG0007380;product=term%3DZinc finger%2C C3HC4 type (RING finger) containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13920 LTnewLM_9 Pfam protein_match 465696 465815 . - . Parent=LTnewLM_090019600.1:pep;Name=PF13920;signature_desc=Zinc finger%2C C3HC4 type (RING finger) ### LTnewLM_9 Liftoff gene 467573 471688 . - . ID=LTnewLM_090019700;coverage=1.0;sequence_ID=0.967;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.1220_0 LTnewLM_9 Liftoff mRNA 467573 471688 . - . ID=LTnewLM_090019700.1;Parent=LTnewLM_090019700;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 467573 471688 . - 0 ID=LTnewLM_090019700.1:CDS:1;Parent=LTnewLM_090019700.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 467573 471688 . - . ID=LTnewLM_090019700.1:pep;Derives_from=LTnewLM_090019700.1;orthologous_to=LmjF.09.1220_mRNA;ortholog_cluster=OG0007381;product=term%3DATPase family associated with various cellular activities (AAA)%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00004;Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 467936 468220 . - . Parent=LTnewLM_090019700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 LTnewLM_9 Pfam protein_match 468659 469000 . - . Parent=LTnewLM_090019700.1:pep;Name=PF00004;signature_desc=ATPase family associated with various cellular activities (AAA);Ontology_term=GO:0005524 ### LTnewLM_9 AUGUSTUS gene 472635 473960 1 - . ID=LTnewLM_090019800 LTnewLM_9 AUGUSTUS mRNA 472635 473960 1 - . ID=LTnewLM_090019800.1;Parent=LTnewLM_090019800 LTnewLM_9 AUGUSTUS CDS 472635 473960 1 - 0 ID=LTnewLM_090019800.1:CDS:1;Parent=LTnewLM_090019800.1 ### LTnewLM_9 . polypeptide 472635 473960 . - . ID=LTnewLM_090019800.1:pep;Derives_from=LTnewLM_090019800.1;orthologous_to=LmjF.09.1230_mRNA;ortholog_cluster=OG0007382;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 474748 482286 1 - . ID=LTnewLM_090019900 LTnewLM_9 AUGUSTUS mRNA 474748 482286 1 - . ID=LTnewLM_090019900.1;Parent=LTnewLM_090019900 LTnewLM_9 AUGUSTUS CDS 474748 482286 1 - 0 ID=LTnewLM_090019900.1:CDS:1;Parent=LTnewLM_090019900.1 ### LTnewLM_9 . polypeptide 474748 482286 . - . ID=LTnewLM_090019900.1:pep;Derives_from=LTnewLM_090019900.1;orthologous_to=LmjF.09.1240_mRNA;ortholog_cluster=OG0007383;product=term%3DAAA domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13086|Pfam:PF13087 LTnewLM_9 Pfam protein_match 475120 475827 . - . Parent=LTnewLM_090019900.1:pep;Name=PF13087;signature_desc=AAA domain LTnewLM_9 Pfam protein_match 475855 476547 . - . Parent=LTnewLM_090019900.1:pep;Name=PF13086;signature_desc=AAA domain ### LTnewLM_9 AUGUSTUS gene 484536 485090 1 - . ID=LTnewLM_090020000 LTnewLM_9 AUGUSTUS mRNA 484536 485090 1 - . ID=LTnewLM_090020000.1;Parent=LTnewLM_090020000 LTnewLM_9 AUGUSTUS CDS 484536 485090 1 - 0 ID=LTnewLM_090020000.1:CDS:1;Parent=LTnewLM_090020000.1 ### LTnewLM_9 . polypeptide 484536 485090 . - . ID=LTnewLM_090020000.1:pep;Derives_from=LTnewLM_090020000.1;orthologous_to=LmjF.09.1250_mRNA;ortholog_cluster=OG0007384;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 485900 487837 1 - . ID=LTnewLM_090020100 LTnewLM_9 AUGUSTUS mRNA 485900 487837 1 - . ID=LTnewLM_090020100.1;Parent=LTnewLM_090020100 LTnewLM_9 AUGUSTUS CDS 485900 487837 1 - 0 ID=LTnewLM_090020100.1:CDS:1;Parent=LTnewLM_090020100.1 ### LTnewLM_9 . polypeptide 485900 487837 . - . ID=LTnewLM_090020100.1:pep;Derives_from=LTnewLM_090020100.1;orthologous_to=LmjF.09.1260_mRNA;ortholog_cluster=OG0007385;product=term%3DBromodomain%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00439;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 487088 487276 . - . Parent=LTnewLM_090020100.1:pep;Name=PF00439;signature_desc=Bromodomain;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 487538 487726 . - . Parent=LTnewLM_090020100.1:pep;Name=PF00439;signature_desc=Bromodomain;Ontology_term=GO:0005515 ### LTnewLM_9 AUGUSTUS gene 489347 490375 1 - . ID=LTnewLM_090020200 LTnewLM_9 AUGUSTUS mRNA 489347 490375 1 - . ID=LTnewLM_090020200.1;Parent=LTnewLM_090020200 LTnewLM_9 AUGUSTUS CDS 489347 490375 1 - 0 ID=LTnewLM_090020200.1:CDS:1;Parent=LTnewLM_090020200.1 ### LTnewLM_9 . polypeptide 489347 490375 . - . ID=LTnewLM_090020200.1:pep;Derives_from=LTnewLM_090020200.1;orthologous_to=LmjF.09.1270_mRNA;ortholog_cluster=OG0007386;product=term%3DMitochondrial carrier protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00153 LTnewLM_9 Pfam protein_match 489368 489595 . - . Parent=LTnewLM_090020200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_9 Pfam protein_match 489680 489919 . - . Parent=LTnewLM_090020200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein LTnewLM_9 Pfam protein_match 490037 490282 . - . Parent=LTnewLM_090020200.1:pep;Name=PF00153;signature_desc=Mitochondrial carrier protein ### LTnewLM_9 AUGUSTUS gene 491930 493033 1 - . ID=LTnewLM_090020300 LTnewLM_9 AUGUSTUS mRNA 491930 493033 1 - . ID=LTnewLM_090020300.1;Parent=LTnewLM_090020300 LTnewLM_9 AUGUSTUS CDS 491930 493033 1 - 0 ID=LTnewLM_090020300.1:CDS:1;Parent=LTnewLM_090020300.1 ### LTnewLM_9 . polypeptide 491930 493033 . - . ID=LTnewLM_090020300.1:pep;Derives_from=LTnewLM_090020300.1;orthologous_to=LmjF.09.1280_mRNA;ortholog_cluster=OG0007387;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 493977 495707 1 - . ID=LTnewLM_090020400 LTnewLM_9 AUGUSTUS mRNA 493977 495707 1 - . ID=LTnewLM_090020400.1;Parent=LTnewLM_090020400 LTnewLM_9 AUGUSTUS CDS 493977 495707 1 - 0 ID=LTnewLM_090020400.1:CDS:1;Parent=LTnewLM_090020400.1 ### LTnewLM_9 . polypeptide 493977 495707 . - . ID=LTnewLM_090020400.1:pep;Derives_from=LTnewLM_090020400.1;orthologous_to=LmjF.09.1290_mRNA;ortholog_cluster=OG0007388;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 496531 497187 1 - . ID=LTnewLM_090020500 LTnewLM_9 AUGUSTUS mRNA 496531 497187 1 - . ID=LTnewLM_090020500.1;Parent=LTnewLM_090020500 LTnewLM_9 AUGUSTUS CDS 496531 497187 1 - 0 ID=LTnewLM_090020500.1:CDS:1;Parent=LTnewLM_090020500.1 ### LTnewLM_9 . polypeptide 496531 497187 . - . ID=LTnewLM_090020500.1:pep;Derives_from=LTnewLM_090020500.1;orthologous_to=LmjF.09.1300_mRNA;ortholog_cluster=OG0007389;product=term%3DPPPDE putative peptidase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05903 LTnewLM_9 Pfam protein_match 496750 497082 . - . Parent=LTnewLM_090020500.1:pep;Name=PF05903;signature_desc=PPPDE putative peptidase domain ### LTnewLM_9 AUGUSTUS gene 499095 499859 1 - . ID=LTnewLM_090020600 LTnewLM_9 AUGUSTUS mRNA 499095 499859 1 - . ID=LTnewLM_090020600.1;Parent=LTnewLM_090020600 LTnewLM_9 AUGUSTUS CDS 499095 499859 1 - 0 ID=LTnewLM_090020600.1:CDS:1;Parent=LTnewLM_090020600.1 ### LTnewLM_9 . polypeptide 499095 499859 . - . ID=LTnewLM_090020600.1:pep;Derives_from=LTnewLM_090020600.1;orthologous_to=LmjF.09.1310_mRNA;ortholog_cluster=OG0007390;product=term%3DPPPDE putative peptidase domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05903 LTnewLM_9 Pfam protein_match 499416 499748 . - . Parent=LTnewLM_090020600.1:pep;Name=PF05903;signature_desc=PPPDE putative peptidase domain ### LTnewLM_9 AUGUSTUS gene 501174 502226 1 - . ID=LTnewLM_090020700 LTnewLM_9 AUGUSTUS mRNA 501174 502226 1 - . ID=LTnewLM_090020700.1;Parent=LTnewLM_090020700 LTnewLM_9 AUGUSTUS CDS 501174 502226 1 - 0 ID=LTnewLM_090020700.1:CDS:1;Parent=LTnewLM_090020700.1 ### LTnewLM_9 . polypeptide 501174 502226 . - . ID=LTnewLM_090020700.1:pep;Derives_from=LTnewLM_090020700.1;orthologous_to=LmjF.09.1315_mRNA;ortholog_cluster=OG0007391;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 504067 505887 1 - . ID=LTnewLM_090020800 LTnewLM_9 AUGUSTUS mRNA 504067 505887 1 - . ID=LTnewLM_090020800.1;Parent=LTnewLM_090020800 LTnewLM_9 AUGUSTUS CDS 504067 505887 1 - 0 ID=LTnewLM_090020800.1:CDS:1;Parent=LTnewLM_090020800.1 ### LTnewLM_9 . polypeptide 504067 505887 . - . ID=LTnewLM_090020800.1:pep;Derives_from=LTnewLM_090020800.1;orthologous_to=LmjF.09.1320_mRNA;ortholog_cluster=OG0007392;product=term%3DParaflagellar rod protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05149;Ontology_term=GO:0031514,GO:0005516 LTnewLM_9 Pfam protein_match 504256 505116 . - . Parent=LTnewLM_090020800.1:pep;Name=PF05149;signature_desc=Paraflagellar rod protein;Ontology_term=GO:0005516,GO:0031514 ### LTnewLM_9 AUGUSTUS gene 507490 509313 1 - . ID=LTnewLM_090020900 LTnewLM_9 AUGUSTUS mRNA 507490 509313 1 - . ID=LTnewLM_090020900.1;Parent=LTnewLM_090020900 LTnewLM_9 AUGUSTUS CDS 507490 509313 1 - 0 ID=LTnewLM_090020900.1:CDS:1;Parent=LTnewLM_090020900.1 ### LTnewLM_9 . polypeptide 507490 509313 . - . ID=LTnewLM_090020900.1:pep;Derives_from=LTnewLM_090020900.1;orthologous_to=LmjF.09.1330_mRNA;ortholog_cluster=OG0007393;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 511043 511378 1 - . ID=LTnewLM_090021000 LTnewLM_9 AUGUSTUS mRNA 511043 511378 1 - . ID=LTnewLM_090021000.1;Parent=LTnewLM_090021000 LTnewLM_9 AUGUSTUS CDS 511043 511378 1 - 0 ID=LTnewLM_090021000.1:CDS:1;Parent=LTnewLM_090021000.1 ### LTnewLM_9 . polypeptide 511043 511378 . - . ID=LTnewLM_090021000.1:pep;Derives_from=LTnewLM_090021000.1;orthologous_to=LmjF.09.1340_mRNA;ortholog_cluster=OG0007394;product=term%3DCore histone H2A/H2B/H3/H4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00125;Ontology_term=GO:0003677 LTnewLM_9 Pfam protein_match 511118 511345 . - . Parent=LTnewLM_090021000.1:pep;Name=PF00125;signature_desc=Core histone H2A/H2B/H3/H4;Ontology_term=GO:0003677 ### LTnewLM_9 AUGUSTUS gene 512509 513087 1 - . ID=LTnewLM_090021100 LTnewLM_9 AUGUSTUS mRNA 512509 513087 1 - . ID=LTnewLM_090021100.1;Parent=LTnewLM_090021100 LTnewLM_9 AUGUSTUS CDS 512509 513087 1 - 0 ID=LTnewLM_090021100.1:CDS:1;Parent=LTnewLM_090021100.1 ### LTnewLM_9 . polypeptide 512509 513087 . - . ID=LTnewLM_090021100.1:pep;Derives_from=LTnewLM_090021100.1;orthologous_to=LmjF.09.1350_mRNA;ortholog_cluster=OG0007395;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 514131 514650 . - . ID=LTnewLM_090021200:pseudogene;coverage=1.0;sequence_ID=0.926;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.1360_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 514131 514650 . - . ID=LTnewLM_090021200.1;Parent=LTnewLM_090021200:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_stop_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 514131 514650 . - . ID=LTnewLM_090021200.1:pseudogenic_exon:1;Parent=LTnewLM_090021200.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 514131 514650 . - . ID=LTnewLM_090021200.1:pep;Derives_from=LTnewLM_090021200.1;orthologous_to=LmjF.09.1360_mRNA;ortholog_cluster=OG0007739;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 516647 517453 1 - . ID=LTnewLM_090021300 LTnewLM_9 AUGUSTUS mRNA 516647 517453 1 - . ID=LTnewLM_090021300.1;Parent=LTnewLM_090021300 LTnewLM_9 AUGUSTUS CDS 516647 517453 1 - 0 ID=LTnewLM_090021300.1:CDS:1;Parent=LTnewLM_090021300.1 ### LTnewLM_9 . polypeptide 516647 517453 . - . ID=LTnewLM_090021300.1:pep;Derives_from=LTnewLM_090021300.1;orthologous_to=LmjF.09.1370_mRNA;ortholog_cluster=OG0007396;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 519638 521380 1 - . ID=LTnewLM_090021400 LTnewLM_9 AUGUSTUS mRNA 519638 521380 1 - . ID=LTnewLM_090021400.1;Parent=LTnewLM_090021400 LTnewLM_9 AUGUSTUS CDS 519638 521380 1 - 0 ID=LTnewLM_090021400.1:CDS:1;Parent=LTnewLM_090021400.1 ### LTnewLM_9 . polypeptide 519638 521380 . - . ID=LTnewLM_090021400.1:pep;Derives_from=LTnewLM_090021400.1;orthologous_to=LmjF.09.1380_mRNA;ortholog_cluster=OG0007397;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 522845 524830 1 - . ID=LTnewLM_090021500 LTnewLM_9 AUGUSTUS mRNA 522845 524830 1 - . ID=LTnewLM_090021500.1;Parent=LTnewLM_090021500 LTnewLM_9 AUGUSTUS CDS 522845 524830 1 - 0 ID=LTnewLM_090021500.1:CDS:1;Parent=LTnewLM_090021500.1 ### LTnewLM_9 . polypeptide 522845 524830 . - . ID=LTnewLM_090021500.1:pep;Derives_from=LTnewLM_090021500.1;orthologous_to=LmjF.09.1390_mRNA;ortholog_cluster=OG0007398;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . pseudogene 525602 527214 . - . ID=LTnewLM_090021600:pseudogene;coverage=0.997;sequence_ID=0.941;valid_ORFs=0;extra_copy_number=0;copy_num_ID=LmjF.09.1400_0;has_internal_stop=true LTnewLM_9 . pseudogenic_transcript 525602 527214 . - . ID=LTnewLM_090021600.1;Parent=LTnewLM_090021600:pseudogene;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 . pseudogenic_exon 525602 527214 . - . ID=LTnewLM_090021600.1:pseudogenic_exon:1;Parent=LTnewLM_090021600.1;extra_copy_number=0 ### LTnewLM_9 . polypeptide 525602 527214 . - . ID=LTnewLM_090021600.1:pep;Derives_from=LTnewLM_090021600.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 528945 530666 1 - . ID=LTnewLM_090021700 LTnewLM_9 AUGUSTUS mRNA 528945 530666 1 - . ID=LTnewLM_090021700.1;Parent=LTnewLM_090021700 LTnewLM_9 AUGUSTUS CDS 528945 530666 1 - 0 ID=LTnewLM_090021700.1:CDS:1;Parent=LTnewLM_090021700.1 ### LTnewLM_9 . polypeptide 528945 530666 . - . ID=LTnewLM_090021700.1:pep;Derives_from=LTnewLM_090021700.1;orthologous_to=LmjF.09.1410_mRNA;ortholog_cluster=OG0007399;product=term%3DSET domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00856;Ontology_term=GO:0005515 LTnewLM_9 Pfam protein_match 529479 529703 . - . Parent=LTnewLM_090021700.1:pep;Name=PF00856;signature_desc=SET domain;Ontology_term=GO:0005515 ### LTnewLM_9 AUGUSTUS gene 531835 532254 1 - . ID=LTnewLM_090021800 LTnewLM_9 AUGUSTUS mRNA 531835 532254 1 - . ID=LTnewLM_090021800.1;Parent=LTnewLM_090021800 LTnewLM_9 AUGUSTUS CDS 531835 532254 1 - 0 ID=LTnewLM_090021800.1:CDS:1;Parent=LTnewLM_090021800.1 ### LTnewLM_9 . polypeptide 531835 532254 . - . ID=LTnewLM_090021800.1:pep;Derives_from=LTnewLM_090021800.1;orthologous_to=LmjF.09.1420_mRNA;ortholog_cluster=OG0007400;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 533014 533730 1 - . ID=LTnewLM_090021900 LTnewLM_9 AUGUSTUS mRNA 533014 533730 1 - . ID=LTnewLM_090021900.1;Parent=LTnewLM_090021900 LTnewLM_9 AUGUSTUS CDS 533014 533730 1 - 0 ID=LTnewLM_090021900.1:CDS:1;Parent=LTnewLM_090021900.1 ### LTnewLM_9 . polypeptide 533014 533730 . - . ID=LTnewLM_090021900.1:pep;Derives_from=LTnewLM_090021900.1;orthologous_to=LmjF.09.1430_mRNA;ortholog_cluster=OG0007401;product=term%3DCoenzyme Q (ubiquinone) biosynthesis protein Coq4%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF05019;Ontology_term=GO:0006744 LTnewLM_9 Pfam protein_match 533047 533691 . - . Parent=LTnewLM_090021900.1:pep;Name=PF05019;signature_desc=Coenzyme Q (ubiquinone) biosynthesis protein Coq4;Ontology_term=GO:0006744 ### LTnewLM_9 . polypeptide 536579 537184 . - . ID=LTnewLM_090022000.1:pep;Derives_from=LTnewLM_090022000.1;orthologous_to=LTnewLM_090022000.2,LTnewLM_090022000.3;ortholog_cluster=OG0000510;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_9 Pfam protein_match 536786 537043 . - . Parent=LTnewLM_090022000.1:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_9 AUGUSTUS gene 536579 537256 0.89 - . ID=LTnewLM_090022000 LTnewLM_9 AUGUSTUS mRNA 536579 537184 0.27 - . ID=LTnewLM_090022000.1;Parent=LTnewLM_090022000 LTnewLM_9 AUGUSTUS CDS 536579 536605 0.46 - 0 ID=LTnewLM_090022000.1:CDS:1;Parent=LTnewLM_090022000.1 LTnewLM_9 AUGUSTUS CDS 536720 537184 0.4 - 0 ID=LTnewLM_090022000.1:CDS:2;Parent=LTnewLM_090022000.1 LTnewLM_9 AUGUSTUS mRNA 536579 537256 0.31 - . ID=LTnewLM_090022000.2;Parent=LTnewLM_090022000 LTnewLM_9 AUGUSTUS CDS 536579 536605 0.5 - 0 ID=LTnewLM_090022000.2:CDS:1;Parent=LTnewLM_090022000.2 LTnewLM_9 AUGUSTUS CDS 536720 537256 0.45 - 0 ID=LTnewLM_090022000.2:CDS:2;Parent=LTnewLM_090022000.2 LTnewLM_9 AUGUSTUS mRNA 536708 537184 0.31 - . ID=LTnewLM_090022000.3;Parent=LTnewLM_090022000 LTnewLM_9 AUGUSTUS CDS 536708 537184 0.31 - 0 ID=LTnewLM_090022000.3:CDS:1;Parent=LTnewLM_090022000.3 ### LTnewLM_9 . polypeptide 536579 537256 . - . ID=LTnewLM_090022000.2:pep;Derives_from=LTnewLM_090022000.2;orthologous_to=LTnewLM_090022000.1,LTnewLM_090022000.3;ortholog_cluster=OG0000510;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_9 Pfam protein_match 536786 537043 . - . Parent=LTnewLM_090022000.2:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_9 . polypeptide 536708 537184 . - . ID=LTnewLM_090022000.3:pep;Derives_from=LTnewLM_090022000.3;orthologous_to=LTnewLM_090022000.1,LTnewLM_090022000.2;ortholog_cluster=OG0000510;product=term%3DABC transporter%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00005;Ontology_term=GO:0016887,GO:0005524 LTnewLM_9 Pfam protein_match 536792 537043 . - . Parent=LTnewLM_090022000.3:pep;Name=PF00005;signature_desc=ABC transporter;Ontology_term=GO:0005524,GO:0016887 ### LTnewLM_9 AUGUSTUS gene 537573 537845 0.99 - . ID=LTnewLM_090022100 LTnewLM_9 AUGUSTUS mRNA 537573 537845 0.99 - . ID=LTnewLM_090022100.1;Parent=LTnewLM_090022100 LTnewLM_9 AUGUSTUS CDS 537573 537689 1 - 0 ID=LTnewLM_090022100.1:CDS:1;Parent=LTnewLM_090022100.1 LTnewLM_9 AUGUSTUS CDS 537744 537845 0.99 - 0 ID=LTnewLM_090022100.1:CDS:2;Parent=LTnewLM_090022100.1 ### LTnewLM_9 . polypeptide 537573 537845 . - . ID=LTnewLM_090022100.1:pep;Derives_from=LTnewLM_090022100.1;product=term%3Dhypothetical protein ### LTnewLM_9 AUGUSTUS gene 539372 540613 1 - . ID=LTnewLM_090022200 LTnewLM_9 AUGUSTUS mRNA 539372 540613 1 - . ID=LTnewLM_090022200.1;Parent=LTnewLM_090022200 LTnewLM_9 AUGUSTUS CDS 539372 540613 1 - 0 ID=LTnewLM_090022200.1:CDS:1;Parent=LTnewLM_090022200.1 ### LTnewLM_9 . polypeptide 539372 540613 . - . ID=LTnewLM_090022200.1:pep;Derives_from=LTnewLM_090022200.1;orthologous_to=LmjF.09.1440_mRNA;ortholog_cluster=OG0007402;product=term%3DDnaJ domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00226 LTnewLM_9 Pfam protein_match 540329 540487 . - . Parent=LTnewLM_090022200.1:pep;Name=PF00226;signature_desc=DnaJ domain ### LTnewLM_9 AUGUSTUS gene 541544 541939 1 - . ID=LTnewLM_090022300 LTnewLM_9 AUGUSTUS mRNA 541544 541939 1 - . ID=LTnewLM_090022300.1;Parent=LTnewLM_090022300 LTnewLM_9 AUGUSTUS CDS 541544 541939 1 - 0 ID=LTnewLM_090022300.1:CDS:1;Parent=LTnewLM_090022300.1 ### LTnewLM_9 . polypeptide 541544 541939 . - . ID=LTnewLM_090022300.1:pep;Derives_from=LTnewLM_090022300.1;orthologous_to=LmjF.09.1450_mRNA;ortholog_cluster=OG0007403;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_9 Pfam protein_match 541586 541888 . - . Parent=LTnewLM_090022300.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_9 AUGUSTUS gene 542592 543044 1 - . ID=LTnewLM_090022400 LTnewLM_9 AUGUSTUS mRNA 542592 543044 1 - . ID=LTnewLM_090022400.1;Parent=LTnewLM_090022400 LTnewLM_9 AUGUSTUS CDS 542592 543044 1 - 0 ID=LTnewLM_090022400.1:CDS:1;Parent=LTnewLM_090022400.1 ### LTnewLM_9 . polypeptide 542592 543044 . - . ID=LTnewLM_090022400.1:pep;Derives_from=LTnewLM_090022400.1;orthologous_to=LmjF.09.1460_mRNA;ortholog_cluster=OG0007404;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_9 Pfam protein_match 542658 542951 . - . Parent=LTnewLM_090022400.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_9 AUGUSTUS gene 543992 544351 1 - . ID=LTnewLM_090022500 LTnewLM_9 AUGUSTUS mRNA 543992 544351 1 - . ID=LTnewLM_090022500.1;Parent=LTnewLM_090022500 LTnewLM_9 AUGUSTUS CDS 543992 544351 1 - 0 ID=LTnewLM_090022500.1:CDS:1;Parent=LTnewLM_090022500.1 ### LTnewLM_9 . polypeptide 543992 544351 . - . ID=LTnewLM_090022500.1:pep;Derives_from=LTnewLM_090022500.1;orthologous_to=LmjF.09.1470_mRNA;ortholog_cluster=OG0007405;product=term%3DRhodanese-like domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00581 LTnewLM_9 Pfam protein_match 544016 544300 . - . Parent=LTnewLM_090022500.1:pep;Name=PF00581;signature_desc=Rhodanese-like domain ### LTnewLM_9 AUGUSTUS gene 545924 548368 1 - . ID=LTnewLM_090022600 LTnewLM_9 AUGUSTUS mRNA 545924 548368 1 - . ID=LTnewLM_090022600.1;Parent=LTnewLM_090022600 LTnewLM_9 AUGUSTUS CDS 545924 548368 1 - 0 ID=LTnewLM_090022600.1:CDS:1;Parent=LTnewLM_090022600.1 ### LTnewLM_9 . polypeptide 545924 548368 . - . ID=LTnewLM_090022600.1:pep;Derives_from=LTnewLM_090022600.1;orthologous_to=LmjF.09.1480_mRNA;ortholog_cluster=OG0007406;product=term%3DOxygenase domain of the 2OGFeDO superfamily/Thymine dioxygenase JBP1 DNA-binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF12851|Pfam:PF18526 LTnewLM_9 Pfam protein_match 546695 547183 . - . Parent=LTnewLM_090022600.1:pep;Name=PF18526;signature_desc=Thymine dioxygenase JBP1 DNA-binding domain LTnewLM_9 Pfam protein_match 547715 548050 . - . Parent=LTnewLM_090022600.1:pep;Name=PF12851;signature_desc=Oxygenase domain of the 2OGFeDO superfamily ### LTnewLM_9 AUGUSTUS gene 549487 549840 1 - . ID=LTnewLM_090022700 LTnewLM_9 AUGUSTUS mRNA 549487 549840 1 - . ID=LTnewLM_090022700.1;Parent=LTnewLM_090022700 LTnewLM_9 AUGUSTUS CDS 549487 549840 1 - 0 ID=LTnewLM_090022700.1:CDS:1;Parent=LTnewLM_090022700.1 ### LTnewLM_9 . polypeptide 549487 549840 . - . ID=LTnewLM_090022700.1:pep;Derives_from=LTnewLM_090022700.1;orthologous_to=LmjF.09.1490_mRNA;ortholog_cluster=OG0007407;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_9 Pfam protein_match 549610 549819 . - . Parent=LTnewLM_090022700.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_9 AUGUSTUS gene 551060 551482 1 - . ID=LTnewLM_090022800 LTnewLM_9 AUGUSTUS mRNA 551060 551482 1 - . ID=LTnewLM_090022800.1;Parent=LTnewLM_090022800 LTnewLM_9 AUGUSTUS CDS 551060 551482 1 - 0 ID=LTnewLM_090022800.1:CDS:1;Parent=LTnewLM_090022800.1 ### LTnewLM_9 . polypeptide 551060 551482 . - . ID=LTnewLM_090022800.1:pep;Derives_from=LTnewLM_090022800.1;product=term%3DCytochrome b5-like Heme/Steroid binding domain containing protein%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF00173;Ontology_term=GO:0020037 LTnewLM_9 Pfam protein_match 551258 551449 . - . Parent=LTnewLM_090022800.1:pep;Name=PF00173;signature_desc=Cytochrome b5-like Heme/Steroid binding domain;Ontology_term=GO:0020037 ### LTnewLM_9 AUGUSTUS gene 551958 552323 1 - . ID=LTnewLM_090022900 LTnewLM_9 AUGUSTUS mRNA 551958 552323 1 - . ID=LTnewLM_090022900.1;Parent=LTnewLM_090022900 LTnewLM_9 AUGUSTUS CDS 551958 552323 1 - 0 ID=LTnewLM_090022900.1:CDS:1;Parent=LTnewLM_090022900.1 ### LTnewLM_9 . polypeptide 551958 552323 . - . ID=LTnewLM_090022900.1:pep;Derives_from=LTnewLM_090022900.1;orthologous_to=LmjF.09.1505_mRNA;ortholog_cluster=OG0007408;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 553204 558132 1 - . ID=LTnewLM_090023000 LTnewLM_9 AUGUSTUS mRNA 553204 558132 1 - . ID=LTnewLM_090023000.1;Parent=LTnewLM_090023000 LTnewLM_9 AUGUSTUS CDS 553204 558132 1 - 0 ID=LTnewLM_090023000.1:CDS:1;Parent=LTnewLM_090023000.1 ### LTnewLM_9 . polypeptide 553204 558132 . - . ID=LTnewLM_090023000.1:pep;Derives_from=LTnewLM_090023000.1;orthologous_to=LmjF.09.1510_mRNA;ortholog_cluster=OG0007409;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 . polypeptide 558756 559610 . - . ID=LTnewLM_090023100.1:pep;Derives_from=LTnewLM_090023100.1;orthologous_to=LTnewLM_090023100.2,LmjF.09.1520.1_mRNA,LmjF.09.1520.2_mRNA;ortholog_cluster=OG0000281;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_9 Pfam protein_match 559074 559130 . - . Parent=LTnewLM_090023100.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_9 Pfam protein_match 559158 559223 . - . Parent=LTnewLM_090023100.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_9 Pfam protein_match 559242 559310 . - . Parent=LTnewLM_090023100.1:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_9 . polypeptide 558756 559772 . - . ID=LTnewLM_090023100.2:pep;Derives_from=LTnewLM_090023100.2;orthologous_to=LTnewLM_090023100.1,LmjF.09.1520.1_mRNA,LmjF.09.1520.2_mRNA;ortholog_cluster=OG0000281;product=term%3DLeucine Rich repeat%2C putative%3Bevidence%3DIEA%3Bwith%3DPfam:PF13516 LTnewLM_9 Pfam protein_match 559074 559130 . - . Parent=LTnewLM_090023100.2:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_9 Pfam protein_match 559158 559223 . - . Parent=LTnewLM_090023100.2:pep;Name=PF13516;signature_desc=Leucine Rich repeat LTnewLM_9 Pfam protein_match 559242 559310 . - . Parent=LTnewLM_090023100.2:pep;Name=PF13516;signature_desc=Leucine Rich repeat ### LTnewLM_9 Liftoff gene 558756 559785 . - . ID=LTnewLM_090023100;coverage=1.0;sequence_ID=0.944;valid_ORFs=1;extra_copy_number=0;copy_num_ID=LmjF.09.1520_0 LTnewLM_9 Liftoff mRNA 558756 559760 . - . ID=LTnewLM_090023100.1;Parent=LTnewLM_090023100;matches_ref_protein=False;valid_ORF=False;missing_start_codon=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 558756 559610 . - 0 ID=LTnewLM_090023100.1:CDS:1;Parent=LTnewLM_090023100.1;extra_copy_number=0 LTnewLM_9 Liftoff five_prime_UTR 559611 559760 . - . ID=LTnewLM_090023100:five_prime_UTR;Parent=LTnewLM_090023100.1;extra_copy_number=0 LTnewLM_9 Liftoff mRNA 558756 559785 . - . ID=LTnewLM_090023100.2;Parent=LTnewLM_090023100;matches_ref_protein=False;valid_ORF=True;extra_copy_number=0 LTnewLM_9 Liftoff CDS 558756 559772 . - 0 ID=LTnewLM_090023100.2:CDS:1;Parent=LTnewLM_090023100.2;extra_copy_number=0 LTnewLM_9 Liftoff five_prime_UTR 559773 559785 . - . ID=LTnewLM_090023100:five_prime_UTR.1;Parent=LTnewLM_090023100.2;extra_copy_number=0 ### LTnewLM_9 AUGUSTUS gene 560272 560757 1 - . ID=LTnewLM_090023200 LTnewLM_9 AUGUSTUS mRNA 560272 560757 1 - . ID=LTnewLM_090023200.1;Parent=LTnewLM_090023200 LTnewLM_9 AUGUSTUS CDS 560272 560757 1 - 0 ID=LTnewLM_090023200.1:CDS:1;Parent=LTnewLM_090023200.1 ### LTnewLM_9 . polypeptide 560272 560757 . - . ID=LTnewLM_090023200.1:pep;Derives_from=LTnewLM_090023200.1;orthologous_to=LmjF.09.1530_mRNA;ortholog_cluster=OG0007410;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 561244 563235 1 - . ID=LTnewLM_090023300 LTnewLM_9 AUGUSTUS mRNA 561244 563235 1 - . ID=LTnewLM_090023300.1;Parent=LTnewLM_090023300 LTnewLM_9 AUGUSTUS CDS 561244 563235 1 - 0 ID=LTnewLM_090023300.1:CDS:1;Parent=LTnewLM_090023300.1 ### LTnewLM_9 . polypeptide 561244 563235 . - . ID=LTnewLM_090023300.1:pep;Derives_from=LTnewLM_090023300.1;orthologous_to=LmjF.09.1540_mRNA;ortholog_cluster=OG0007411;product=term%3Dhypothetical protein%2C conserved ### LTnewLM_9 AUGUSTUS gene 563724 564269 1 - . ID=LTnewLM_090023400 LTnewLM_9 AUGUSTUS mRNA 563724 564269 1 - . ID=LTnewLM_090023400.1;Parent=LTnewLM_090023400 LTnewLM_9 AUGUSTUS CDS 563724 564269 1 - 0 ID=LTnewLM_090023400.1:CDS:1;Parent=LTnewLM_090023400.1 ### LTnewLM_9 . polypeptide 563724 564269 . - . ID=LTnewLM_090023400.1:pep;Derives_from=LTnewLM_090023400.1;orthologous_to=LmjF.09.1550_mRNA;ortholog_cluster=OG0007412;product=term%3Dhypothetical protein%2C conserved ###