# gffcompare v0.11.2 | Command line was:
#gffcompare -o b3dffe87-e66d-4f44-bb06-c2c1622c8ef1PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff b3dffe87-e66d-4f44-bb06-c2c1622c8ef1
#

#= Summary for dataset: b3dffe87-e66d-4f44-bb06-c2c1622c8ef1 
#     Query mRNAs :      36 in      11 loci  (35 multi-exon transcripts)
#            (4 multi-transcript loci, ~3.3 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       10
#-----------------| Sensitivity | Precision  |
        Base level:    40.4     |    97.1    |
        Exon level:    35.5     |    74.0    |
      Intron level:    33.9     |    71.7    |
Intron chain level:    26.7     |    45.7    |
  Transcript level:    25.0     |    47.2    |
       Locus level:    55.6     |    90.9    |

     Matching intron chains:      16
       Matching transcripts:      17
              Matching loci:      10

          Missed exons:      81/186	( 43.5%)
           Novel exons:       0/77	(  0.0%)
        Missed introns:      61/112	( 54.5%)
         Novel introns:       0/53	(  0.0%)
           Missed loci:       8/18	( 44.4%)
            Novel loci:       0/11	(  0.0%)

 Total union super-loci across all input datasets: 10 
36 out of 36 consensus transcripts written in b3dffe87-e66d-4f44-bb06-c2c1622c8ef1PREF.annotated.gtf (0 discarded as redundant)