# gffcompare v0.11.2 | Command line was:
#gffcompare -o cbe4ec33-b553-45b5-a5e2-297334645980PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff cbe4ec33-b553-45b5-a5e2-297334645980
#

#= Summary for dataset: cbe4ec33-b553-45b5-a5e2-297334645980 
#     Query mRNAs :      40 in      14 loci  (36 multi-exon transcripts)
#            (9 multi-transcript loci, ~2.9 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       12
#-----------------| Sensitivity | Precision  |
        Base level:    46.7     |    97.6    |
        Exon level:    45.2     |    81.1    |
      Intron level:    42.9     |    81.4    |
Intron chain level:    31.7     |    52.8    |
  Transcript level:    30.9     |    52.5    |
       Locus level:    55.6     |    78.6    |

     Matching intron chains:      19
       Matching transcripts:      21
              Matching loci:      10

          Missed exons:      55/186	( 29.6%)
           Novel exons:       0/95	(  0.0%)
        Missed introns:      45/112	( 40.2%)
         Novel introns:       0/59	(  0.0%)
           Missed loci:       6/18	( 33.3%)
            Novel loci:       0/14	(  0.0%)

 Total union super-loci across all input datasets: 12 
40 out of 40 consensus transcripts written in cbe4ec33-b553-45b5-a5e2-297334645980PREF.annotated.gtf (0 discarded as redundant)