# gffcompare v0.11.2 | Command line was:
#gffcompare -o ff857f72-b804-4486-b091-c7c5a258616bPREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff ff857f72-b804-4486-b091-c7c5a258616b
#

#= Summary for dataset: ff857f72-b804-4486-b091-c7c5a258616b 
#     Query mRNAs :      82 in      14 loci  (78 multi-exon transcripts)
#            (9 multi-transcript loci, ~5.9 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       12
#-----------------| Sensitivity | Precision  |
        Base level:    51.8     |    97.8    |
        Exon level:    51.6     |    61.1    |
      Intron level:    50.0     |    56.0    |
Intron chain level:    33.3     |    25.6    |
  Transcript level:    32.4     |    26.8    |
       Locus level:    55.6     |    78.6    |

     Matching intron chains:      20
       Matching transcripts:      22
              Matching loci:      10

          Missed exons:      47/186	( 25.3%)
           Novel exons:       0/149	(  0.0%)
        Missed introns:      37/112	( 33.0%)
         Novel introns:       0/100	(  0.0%)
           Missed loci:       6/18	( 33.3%)
            Novel loci:       0/14	(  0.0%)

 Total union super-loci across all input datasets: 12 
82 out of 82 consensus transcripts written in ff857f72-b804-4486-b091-c7c5a258616bPREF.annotated.gtf (0 discarded as redundant)