# gffcompare v0.11.2 | Command line was:
#gffcompare -o b34a4453-7e39-450b-b4fe-0abfeb939726PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff b34a4453-7e39-450b-b4fe-0abfeb939726
#

#= Summary for dataset: b34a4453-7e39-450b-b4fe-0abfeb939726 
#     Query mRNAs :       9 in       5 loci  (8 multi-exon transcripts)
#            (2 multi-transcript loci, ~1.8 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:        5
#-----------------| Sensitivity | Precision  |
        Base level:    14.3     |    99.3    |
        Exon level:     9.7     |    72.7    |
      Intron level:     9.8     |    84.6    |
Intron chain level:     8.3     |    62.5    |
  Transcript level:     7.4     |    55.6    |
       Locus level:    16.7     |    60.0    |

     Matching intron chains:       5
       Matching transcripts:       5
              Matching loci:       3

          Missed exons:     149/186	( 80.1%)
           Novel exons:       0/22	(  0.0%)
        Missed introns:      96/112	( 85.7%)
         Novel introns:       0/13	(  0.0%)
           Missed loci:      13/18	( 72.2%)
            Novel loci:       0/5	(  0.0%)

 Total union super-loci across all input datasets: 5 
9 out of 9 consensus transcripts written in b34a4453-7e39-450b-b4fe-0abfeb939726PREF.annotated.gtf (0 discarded as redundant)