# gffcompare v0.11.2 | Command line was:
#gffcompare -o 38cc7298-3200-44a5-8f1a-378f18877bafPREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff 38cc7298-3200-44a5-8f1a-378f18877baf
#

#= Summary for dataset: 38cc7298-3200-44a5-8f1a-378f18877baf 
#     Query mRNAs :      15 in       5 loci  (14 multi-exon transcripts)
#            (3 multi-transcript loci, ~3.0 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:        5
#-----------------| Sensitivity | Precision  |
        Base level:    16.2     |    99.1    |
        Exon level:    11.8     |    67.6    |
      Intron level:    11.6     |    65.0    |
Intron chain level:     8.3     |    35.7    |
  Transcript level:     7.4     |    33.3    |
       Locus level:    16.7     |    60.0    |

     Matching intron chains:       5
       Matching transcripts:       5
              Matching loci:       3

          Missed exons:     146/186	( 78.5%)
           Novel exons:       0/34	(  0.0%)
        Missed introns:      94/112	( 83.9%)
         Novel introns:       0/20	(  0.0%)
           Missed loci:      13/18	( 72.2%)
            Novel loci:       0/5	(  0.0%)

 Total union super-loci across all input datasets: 5 
15 out of 15 consensus transcripts written in 38cc7298-3200-44a5-8f1a-378f18877bafPREF.annotated.gtf (0 discarded as redundant)