# gffcompare v0.11.2 | Command line was:
#gffcompare -o 884928b6-963b-43b9-beda-108b96bfbef8PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff 884928b6-963b-43b9-beda-108b96bfbef8
#

#= Summary for dataset: 884928b6-963b-43b9-beda-108b96bfbef8 
#     Query mRNAs :      25 in      11 loci  (24 multi-exon transcripts)
#            (7 multi-transcript loci, ~2.3 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       10
#-----------------| Sensitivity | Precision  |
        Base level:    41.0     |    97.8    |
        Exon level:    41.4     |    89.5    |
      Intron level:    39.3     |    93.6    |
Intron chain level:    30.0     |    75.0    |
  Transcript level:    27.9     |    76.0    |
       Locus level:    55.6     |    90.9    |

     Matching intron chains:      18
       Matching transcripts:      19
              Matching loci:      10

          Missed exons:      71/186	( 38.2%)
           Novel exons:       0/76	(  0.0%)
        Missed introns:      51/112	( 45.5%)
         Novel introns:       0/47	(  0.0%)
           Missed loci:       8/18	( 44.4%)
            Novel loci:       0/11	(  0.0%)

 Total union super-loci across all input datasets: 10 
25 out of 25 consensus transcripts written in 884928b6-963b-43b9-beda-108b96bfbef8PREF.annotated.gtf (0 discarded as redundant)