# gffcompare v0.11.2 | Command line was:
#gffcompare -o 61cc22b3-840d-4626-b2ff-95a28afa7fe4PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff 61cc22b3-840d-4626-b2ff-95a28afa7fe4
#

#= Summary for dataset: 61cc22b3-840d-4626-b2ff-95a28afa7fe4 
#     Query mRNAs :      19 in       9 loci  (18 multi-exon transcripts)
#            (4 multi-transcript loci, ~2.1 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:        9
#-----------------| Sensitivity | Precision  |
        Base level:    31.1     |    97.3    |
        Exon level:    28.0     |    88.2    |
      Intron level:    24.1     |    90.0    |
Intron chain level:    21.7     |    72.2    |
  Transcript level:    20.6     |    73.7    |
       Locus level:    44.4     |    88.9    |

     Matching intron chains:      13
       Matching transcripts:      14
              Matching loci:       8

          Missed exons:     110/186	( 59.1%)
           Novel exons:       0/51	(  0.0%)
        Missed introns:      72/112	( 64.3%)
         Novel introns:       0/30	(  0.0%)
           Missed loci:       9/18	( 50.0%)
            Novel loci:       0/9	(  0.0%)

 Total union super-loci across all input datasets: 9 
19 out of 19 consensus transcripts written in 61cc22b3-840d-4626-b2ff-95a28afa7fe4PREF.annotated.gtf (0 discarded as redundant)