# gffcompare v0.11.2 | Command line was:
#gffcompare -o d3c8e92d-1e33-4e98-87fd-9e4a46ce45c3PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Post.SIRVs.gff d3c8e92d-1e33-4e98-87fd-9e4a46ce45c3
#

#= Summary for dataset: d3c8e92d-1e33-4e98-87fd-9e4a46ce45c3 
#     Query mRNAs :      33 in       9 loci  (32 multi-exon transcripts)
#            (4 multi-transcript loci, ~3.7 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:        9
#-----------------| Sensitivity | Precision  |
        Base level:    32.5     |    97.3    |
        Exon level:    32.8     |    75.7    |
      Intron level:    28.6     |    71.1    |
Intron chain level:    23.3     |    43.8    |
  Transcript level:    22.1     |    45.5    |
       Locus level:    44.4     |    88.9    |

     Matching intron chains:      14
       Matching transcripts:      15
              Matching loci:       8

          Missed exons:      97/186	( 52.2%)
           Novel exons:       0/70	(  0.0%)
        Missed introns:      62/112	( 55.4%)
         Novel introns:       0/45	(  0.0%)
           Missed loci:       9/18	( 50.0%)
            Novel loci:       0/9	(  0.0%)

 Total union super-loci across all input datasets: 9 
33 out of 33 consensus transcripts written in d3c8e92d-1e33-4e98-87fd-9e4a46ce45c3PREF.annotated.gtf (0 discarded as redundant)