# gffcompare v0.11.2 | Command line was:
#gffcompare -o b7176b37-1ca1-4c3b-88d6-907ec2ed51bdPREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Pre.SIRVs.gff b7176b37-1ca1-4c3b-88d6-907ec2ed51bd
#

#= Summary for dataset: b7176b37-1ca1-4c3b-88d6-907ec2ed51bd 
#     Query mRNAs :       8 in       8 loci  (8 multi-exon transcripts)
#            (0 multi-transcript loci, ~1.0 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:        8
#-----------------| Sensitivity | Precision  |
        Base level:    22.1     |    99.9    |
        Exon level:    18.8     |   100.0    |
      Intron level:    17.9     |   100.0    |
Intron chain level:    13.3     |   100.0    |
  Transcript level:    11.8     |   100.0    |
       Locus level:    44.4     |   100.0    |

     Matching intron chains:       8
       Matching transcripts:       8
              Matching loci:       8

          Missed exons:     125/186	( 67.2%)
           Novel exons:       0/28	(  0.0%)
        Missed introns:      79/112	( 70.5%)
         Novel introns:       0/20	(  0.0%)
           Missed loci:      10/18	( 55.6%)
            Novel loci:       0/8	(  0.0%)

 Total union super-loci across all input datasets: 8 
8 out of 8 consensus transcripts written in b7176b37-1ca1-4c3b-88d6-907ec2ed51bdPREF.annotated.gtf (0 discarded as redundant)