# gffcompare v0.11.2 | Command line was: #gffcompare -o d903a7c7-a88b-49d8-8818-b8259a51b730PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Pre.SIRVs.gff d903a7c7-a88b-49d8-8818-b8259a51b730 # #= Summary for dataset: d903a7c7-a88b-49d8-8818-b8259a51b730 # Query mRNAs : 7 in 5 loci (7 multi-exon transcripts) # (1 multi-transcript loci, ~1.4 transcripts per locus) # Reference mRNAs : 68 in 18 loci (60 multi-exon) # Super-loci w/ reference transcripts: 5 #-----------------| Sensitivity | Precision | Base level: 13.1 | 99.7 | Exon level: 15.6 | 92.3 | Intron level: 14.3 | 94.1 | Intron chain level: 8.3 | 71.4 | Transcript level: 7.4 | 71.4 | Locus level: 27.8 | 100.0 | Matching intron chains: 5 Matching transcripts: 5 Matching loci: 5 Missed exons: 129/186 ( 69.4%) Novel exons: 0/26 ( 0.0%) Missed introns: 78/112 ( 69.6%) Novel introns: 0/17 ( 0.0%) Missed loci: 13/18 ( 72.2%) Novel loci: 0/5 ( 0.0%) Total union super-loci across all input datasets: 5 7 out of 7 consensus transcripts written in d903a7c7-a88b-49d8-8818-b8259a51b730PREF.annotated.gtf (0 discarded as redundant)