# gffcompare v0.11.2 | Command line was:
#gffcompare -o a644798f-5042-4197-a3c6-538418a6ac43PREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Pre.SIRVs.gff a644798f-5042-4197-a3c6-538418a6ac43
#

#= Summary for dataset: a644798f-5042-4197-a3c6-538418a6ac43 
#     Query mRNAs :      67 in      14 loci  (64 multi-exon transcripts)
#            (10 multi-transcript loci, ~4.8 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       14
#-----------------| Sensitivity | Precision  |
        Base level:    86.7     |    98.3    |
        Exon level:    85.5     |    83.8    |
      Intron level:    83.9     |    81.7    |
Intron chain level:    61.7     |    57.8    |
  Transcript level:    58.8     |    59.7    |
       Locus level:    77.8     |   100.0    |

     Matching intron chains:      37
       Matching transcripts:      40
              Matching loci:      14

          Missed exons:       8/186	(  4.3%)
           Novel exons:       0/191	(  0.0%)
        Missed introns:       2/112	(  1.8%)
         Novel introns:       0/115	(  0.0%)
           Missed loci:       4/18	( 22.2%)
            Novel loci:       0/14	(  0.0%)

 Total union super-loci across all input datasets: 14 
67 out of 67 consensus transcripts written in a644798f-5042-4197-a3c6-538418a6ac43PREF.annotated.gtf (0 discarded as redundant)