# gffcompare v0.11.2 | Command line was:
#gffcompare -o 9e43ca67-5a4a-471b-8efe-f07d8ead167ePREF -r /users/rg/gkaur/LyRic_gencode/output/annotations/Pre.SIRVs.gff 9e43ca67-5a4a-471b-8efe-f07d8ead167e
#

#= Summary for dataset: 9e43ca67-5a4a-471b-8efe-f07d8ead167e 
#     Query mRNAs :     116 in      18 loci  (105 multi-exon transcripts)
#            (12 multi-transcript loci, ~6.4 transcripts per locus)
# Reference mRNAs :      68 in      18 loci  (60 multi-exon)
# Super-loci w/ reference transcripts:       17
#-----------------| Sensitivity | Precision  |
        Base level:    96.8     |    95.0    |
        Exon level:    90.3     |    74.4    |
      Intron level:    90.2     |    69.7    |
Intron chain level:    68.3     |    39.0    |
  Transcript level:    70.6     |    41.4    |
       Locus level:    94.4     |    94.4    |

     Matching intron chains:      41
       Matching transcripts:      48
              Matching loci:      17

          Missed exons:       4/186	(  2.2%)
           Novel exons:       4/270	(  1.5%)
        Missed introns:       3/112	(  2.7%)
         Novel introns:       2/145	(  1.4%)
           Missed loci:       1/18	(  5.6%)
            Novel loci:       1/18	(  5.6%)

 Total union super-loci across all input datasets: 18 
116 out of 116 consensus transcripts written in 9e43ca67-5a4a-471b-8efe-f07d8ead167ePREF.annotated.gtf (0 discarded as redundant)